COMPASS
Job ID: JOB_3NReEt
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Running PSI-BLAST on a single sequence...
PSI-BLAST is done.
Finished...PSI-BLAST output is successfully proccessed.
Generating query profile...
Searching please wait... 100% done.
COMPASS 3.0
Reference:
Ruslan I. Sadreyev and Nick V. Grishin (2003) COMPASS: a tool for comparison
of multiple protein alignments with assessment of statistical significance.
J Mol. Biol. 326(1):317-36
Job ID: JOB_3NReEt
Input: QUERY Input processed by alignment reader (please check!)
Query = PSI-BLAST alignment produced from input
length=96; filtered_length=91; Neff=9.912
(threshold of effective gap content in columns: 0.5)
Database: SCOP40 iter5
Effective database length used: 1329419
COMPASS alignment format:
CAPITAL letters: residues at positions aligned by COMPASS (input alignment positions with gap content < 0.5)
lower-case letters: residues at positions not used by COMPASS (input alignment positions with gap content >= 0.5)
'-' : gaps retained from original alignments at positions aligned by COMPASS (positions with gap content < 0.5)
'.' : gaps retained from original alignments at positions not used by COMPASS (positions with gap content >= 0.5)
'=' : gaps introduced by COMPASS in profile-profile alignment
'~' : gaps introduced by COMPASS against positions that are not used in the construction of profile-profile alignment
(positions with gap content >= 0.5)
Clickable sequence names: links to full alignments.
For more details, see documentation.
Hits with E-value BETTER than threshold:
Profiles producing significant alignments: Score E-value
No hits better than threshold were found
Hits with E-value WORSE than threshold (may be not biologically meaningful):
d1guia_ b.18.1.14 Carbohydrate binding module from laminari 53 4.52e-01
d1ifra_ b.1.16.1 Lamin A/C globular tail domain 47 1.02e+00
d1hs6a2 b.98.1.1 Leukotriene A4 hydrolase N-terminal domain 51 1.20e+00
d1kshb_ b.1.18.8 GMP-PDE delta 45 2.74e+00
d3gcb__ d.3.1.1 Bleomycin hydrolase 50 3.35e+00
d1bqua1 b.1.2.1 Cytokine receptor gp130 cytokine-binding do 43 5.39e+00
d1t2wa_ b.100.1.1 Sortase A 44 7.03e+00
d1xsia2 b.30.5.11 Putative glucosidase YicI, N-terminal dom 47 8.15e+00
d1ujta_ b.1.2.1 KIAA1568 protein 43 9.28e+00
d2cb5a_ d.3.1.1 Bleomycin hydrolase 47 1.02e+01
d1gu3a_ b.18.1.14 Cellulose-binding domain of cellulase C 42 1.13e+01
d1cd9b2 b.1.2.1 Granulocyte colony-stimulating factor (GC-S 42 1.19e+01
d1uema_ b.1.2.1 KIAA1568 protein 42 1.25e+01
d1so7a_ b.68.1.1 Sialidase 2 (Neu2) 47 1.28e+01
d1r6va_ c.41.1.1 Fervidolysin 48 1.45e+01
d1j75a_ a.4.5.19 Dlm-1 37 1.50e+01
d1am2__ b.86.1.2 GyrA intein 44 1.51e+01
d1ip9a_ d.15.2.2 Bud emergence mediator Bemp1 38 1.69e+01
d1gv9a_ b.29.1.13 Carbohydrate-recognition domain of P58/ER 44 1.81e+01
d1uena_ b.1.2.1 KIAA0343 protein 41 1.91e+01
d1bpv__ b.1.2.1 Type I titin module 40 1.98e+01
d1m9sa3 b.34.11.1 Internalin B, C-terminal domains 37 2.26e+01
d1gk9.1 d.153.1.2 Penicillin acylase 46 2.28e+01
d1quqb_ b.40.4.3 Replication protein A 14 KDa (RPA14) subun 38 2.43e+01
d1n26a3 b.1.2.1 Interleukin-6 receptor alpha chain, domains 39 2.67e+01
d1wfta_ b.1.2.1 Host cell factor 2, HCF-2 40 2.82e+01
d1ueya_ b.1.2.1 KIAA0343 protein 40 2.89e+01
d1vpma_ d.38.1.1 Acyl-CoA hydrolase BH0798 40 3.05e+01
d1v5ja_ b.1.2.1 KIAA1355 39 3.13e+01
d1t0ba_ c.23.16.6 GK2113 homologue 41 3.16e+01
d1k12a_ b.18.1.15 Fucose binding lectin 41 3.17e+01
d1tdpa_ a.29.8.1 Carnobacteriocin B2 immunity protein 36 3.38e+01
d1f8ra2 d.16.1.5 L-aminoacid oxidase 39 3.44e+01
d1ky9a2 b.47.1.1 Protease Do (DegP, HtrA), catalytic domain 40 3.50e+01
d1od3a_ b.18.1.10 Putative xylanase 39 3.53e+01
d1wk0a_ b.1.2.1 Fibronectin type-III domain containing prot 40 3.57e+01
d1mtyb_ a.25.1.2 Methane monooxygenase hydrolase beta subun 41 3.57e+01
d1hn0a2 b.18.1.17 Chondroitin ABC lyase I, N-terminal domai 39 3.62e+01
d1qg3a1 b.1.2.1 Integrin beta-4 subunit 38 3.62e+01
d1owwa_ b.1.2.1 Fibronectin, different Fn3 modules 38 3.86e+01
d1wdds_ d.73.1.1 Ribulose 1,5-bisphosphate carboxylase-oxyg 37 4.10e+01
d1tkea2 d.67.1.1 Threonyl-tRNA synthetase (ThrRS), second ' 38 4.20e+01
d1qwna2 b.30.5.6 Golgi alpha-mannosidase II 43 4.24e+01
d2hft_1 b.1.2.1 Extracellular region of human tissue factor 37 4.27e+01
d1v7la_ c.8.2.1 Isopropylmalate isomerase LeuD 38 4.28e+01
d1n7oa3 b.30.5.2 Hyaluronate lyase 39 4.47e+01
d1qba_3 c.1.8.6 Bacterial chitobiase (beta-N-acetylhexosami 42 4.54e+01
d1p5vb_ b.2.3.2 F1 capsule antigen Caf1 37 4.67e+01
d1b37a2 d.16.1.5 Polyamine oxidase 38 4.67e+01
d1lwra_ b.1.2.1 Neural cell adhesion molecule 1, NCAM 37 4.71e+01
d1bqua2 b.1.2.1 Cytokine receptor gp130 cytokine-binding do 38 4.81e+01
d1h6oa_ a.146.1.1 TRF1 38 4.92e+01
d1tova_ b.34.10.1 Cytoskeleton-associated protein F53F4.3 36 4.93e+01
d1rblm_ d.73.1.1 Ribulose 1,5-bisphosphate carboxylase-oxyg 36 4.99e+01
d1mwva1 a.93.1.3 Catalase-peroxidase KatG 41 5.04e+01
d1c3ga1 b.4.1.1 Heat shock protein 40 Sis1 34 5.15e+01
d1v43a2 b.40.6.3 Hypothetical protein PH0022, C-terminal do 35 5.22e+01
d1vpba_ d.283.1.1 Putative modulator of DNA gyrase BT3649 42 5.36e+01
d1wfua_ b.1.2.1 Fibronectin type 3 and ankyrin repeat domai 38 5.37e+01
d1dfca1 b.42.5.1 Fascin 37 5.58e+01
d1soxa1 b.1.18.6 Sulfite oxidase, C-terminal domain 37 5.59e+01
d1ll8a_ d.110.3.5 N-terminal PAS domain of Pas kinase 38 5.73e+01
d1nbfa_ d.3.1.9 Ubiquitin carboxyl-terminal hydrolase 7 (US 41 5.88e+01
d1jtgb_ d.98.1.1 beta-lactamase-inhibitor protein, BLIP 37 5.91e+01
d1kb9a2 d.185.1.1 Cytochrome bc1 core subunit 1 40 5.97e+01
d1b5ta_ c.1.23.1 Methylenetetrahydrofolate reductase 40 6.07e+01
d1hh1a_ c.52.1.18 Archaeal Holliday junction resolvase Hjc 36 6.09e+01
d1v9ya_ d.110.3.2 Direct oxygen sensor protein, DOS 37 6.24e+01
d1qg3a2 b.1.2.1 Integrin beta-4 subunit 37 6.36e+01
d3lkfa_ f.6.1.1 Leukocidin F (HlgB) 38 6.45e+01
d1cd1a2 d.19.1.1 CD1, alpha-1 and alpha-2 domains 37 6.49e+01
d1fnf_2 b.1.2.1 Fibronectin, different Fn3 modules 36 6.49e+01
d1pk6a_ b.22.1.1 Complement c1q globular head, A chain 37 6.50e+01
d1fnha2 b.1.2.1 Fibronectin, different Fn3 modules 36 6.78e+01
d1wj3a_ b.1.2.1 Contactin 3 (KIAA1496) 37 6.82e+01
d1s3ea2 d.16.1.5 Monoamine oxidase B 37 6.83e+01
d2fnba_ b.1.2.1 Fibronectin, different Fn3 modules 36 6.90e+01
d1cfb_1 b.1.2.1 Neuroglian, two amino proximal Fn3 repeats 36 7.10e+01
d1g2914 b.40.6.3 Maltose transport protein MalK, C-terminal 33 7.11e+01
d1sqja2 b.69.13.1 Oligoxyloglucan reducing end-specific cel 42 7.22e+01
d1vkda_ b.67.2.4 Hypothetical protein TM1225 41 7.45e+01
d1oxxk1 b.40.6.3 Glucose transport protein GlcV, N-terminal 36 7.68e+01
d1vq0a1 d.193.1.1 Heat shock protein 33, Hsp33 38 7.76e+01
d1krha1 b.43.4.2 Benzoate dioxygenase reductase 34 7.77e+01
d1mi8a_ b.86.1.2 DnaB intein 38 7.97e+01
d2pia_1 b.43.4.2 Phthalate dioxygenase reductase 34 8.13e+01
d1je5a_ b.40.4.7 gp2.5 39 8.15e+01
d1chua2 c.3.1.4 L-aspartate oxidase 38 8.24e+01
d1qfha1 b.1.18.10 F-actin cross-linking gelation factor (AB 36 8.31e+01
d1jj2k_ c.12.1.1 Ribosomal protein L15 (L15p) 37 8.37e+01
d1iarb2 b.1.2.1 Interleukin-4 receptor alpha chain 36 8.42e+01
d1k85a_ b.1.2.1 Fibronectin type III domain from chitinase 35 8.67e+01
d1qr4a2 b.1.2.1 Tenascin 35 8.94e+01
d1fnf_3 b.1.2.1 Fibronectin, different Fn3 modules 35 8.99e+01
d1fnha1 b.1.2.1 Fibronectin, different Fn3 modules 35 9.11e+01
d1jj2e1 d.141.1.1 Ribosomal protein L6 34 9.31e+01
d1jgta2 d.153.1.1 beta-Lactam synthetase 37 9.34e+01
d1nls__ b.29.1.1 Concanavalin A 38 9.34e+01
d1e2ta_ d.3.1.5 Arylamine N-acetyltransferase 38 9.40e+01
d1ten__ b.1.2.1 Tenascin 35 9.59e+01
d1rifa_ c.37.1.23 DNA helicase UvsW 37 9.67e+01
d1or0.1 d.153.1.2 Cephalosporin acylase 40 9.71e+01
d1kica_ c.70.1.1 Inosine-adenosine-guanosine preferring nuc 39 9.72e+01
d1h8ua_ d.169.1.1 Eosinophil major basic protein 35 9.73e+01
d1u0ka2 d.21.1.2 Hypothetical protein PA4716 37 9.79e+01
d1j8ka_ b.1.2.1 Fibronectin, different Fn3 modules 35 9.83e+01
d1nnga_ d.38.1.1 Putative acyl-coa thioester hydrolase HI08 36 9.83e+01
Alignments:
Subject = d1guia_ b.18.1.14 Carbohydrate binding module from laminari
length=155 filtered_length=153 Neff=16.935
Smith-Waterman score = 53 Evalue = 4.52e-01
QUERY 10 EYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAW 78
CONSENSUS_1 9 EYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSW 77
+++VK +++G+ + ++G+GY++Y + +++ ++ +++FTA+++ + + L++++ ++ + +
CONSENSUS_2 78 SFWVKADGGGSLTVKLGLSGGGYTAYSSQTVALTTEWTKYTFTFTAPATTDINVRLAFELGGAGTGTVY 146
d1guia_ 78 SFKAKADTPRPINVKILQNHDPWTNYFAQTVNLTADWQTFTFTYTHPDDADEVVQISFELGEGTATTIY 146
Subject = d1ifra_ b.1.16.1 Lamin A/C globular tail domain
length=113 filtered_length=111 Neff=12.658
Smith-Waterman score = 47 Evalue = 1.02e+00
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSA 77
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKS 76
+G + ++++ DGK V+ +++++K ++KLK ++++E + +F ++ +LK G+ ++++ +++++ +
CONSENSUS_2 6 KGPVSIAEVDPDGKFVELENTGDKDVDLGGWKLKRKVDGKEEVVFTFPSGFVLKPGGTVTVWAAGAGATHN 76
d1ifra_ 6 SGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHS 76
Subject = d1hs6a2 b.98.1.1 Leukotriene A4 hydrolase N-terminal domain
length=183 filtered_length=182 Neff=16.549
Smith-Waterman score = 51 Evalue = 1.20e+00
QUERY 13 VQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAW 78
CONSENSUS_1 12 VKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSW 77
V++++++ +++++++ +++++ ++ +L+ + G++ +++++ + +L+++++ +L++++++G + +
CONSENSUS_2 39 VTLDGKPLDFELVSEYDLDGEFLVITLPEALPAGGTYVLEIEFTGNLNNTGLYGLSYSDDDGETRY 104
d1hs6a2 64 VVINGQEVKYALGERQSYKGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHP 129
Subject = d1kshb_ b.1.18.8 GMP-PDE delta
length=149 filtered_length=146 Neff=7.247
Smith-Waterman score = 45 Evalue = 2.74e+00
QUERY 21 EVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWE 79
CONSENSUS_1 20 KVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWE 78
+++ +++ ++ + +++ K ++ + +E++F++++++K+ +++ ++ +G+ +KS++
CONSENSUS_2 32 EITKDPSVPDIEIEARFPPKFLKLKAVGAEIEFSVGEPIKNFRLIERHYFRGRLLKSFD 90
d1kshb_ 32 QGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQKVYFKGQCLEEWF 90
Subject = d3gcb__ d.3.1.1 Bleomycin hydrolase
length=458 filtered_length=448 Neff=13.609
Smith-Waterman score = 50 Evalue = 3.35e+00
QUERY 22 VHSKADNGQKYKDYEYKLTGFDKDGKEKELEF=====TAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 21 VAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKF=====TADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
+AE+ D G+++ ++ L+GY+ D ++ ++K+ + +++ ++ Y++++ + ++ + V+KK +PK++L++L+
CONSENSUS_2 361 KAERLDCGESLLDHAVLLVGYGLDENDGGPKYWIVKNSWGEDWGEKGYFRMSRDWFDECVYGIVVDKKYLPKELLKILD 439
d3gcb__ 361 KASRIRYHESLMTHAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQKYFEEYCFQIVVDINELPKELASKFT 439
Subject = d1bqua1 b.1.2.1 Cytokine receptor gp130 cytokine-binding do
length=95 filtered_length=93 Neff=17.333
Smith-Waterman score = 43 Evalue = 5.39e+00
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEK 49
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEK 48
+ G+D+++ +++T+GK++ ++++ +++++YE++++++++ G+ +
CONSENSUS_2 42 KKGEDKWCECVDTGGKNSCFLVKGLSPGTEYEFRVVAVNALGSSE 86
d1bqua1 42 WATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVT 86
Subject = d1t2wa_ b.100.1.1 Sortase A
length=145 filtered_length=143 Neff=15.063
Smith-Waterman score = 44 Evalue = 7.03e+00
QUERY 53 FTAQKNLRKEAFLRVYHSDKKG===VSAWEEVKKDELPA 88
CONSENSUS_1 52 FTADKKLKKGAYLKLYVNKGKG===VKSWEEVKKKEIPK 87
F+ +KLKKG+ +++++++G V+S E V+++++++
CONSENSUS_2 69 FSDLDKLKKGDKIYVTDAGGTYVYRVTSIEVVDPDDVDV 107
d1t2wa_ 69 FTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGV 107
Subject = d1xsia2 b.30.5.11 Putative glucosidase YicI, N-terminal dom
length=247 filtered_length=239 Neff=17.874
Smith-Waterman score = 47 Evalue = 8.15e+00
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFL 65
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYL 64
++ ++++ V+I++++ +++ + ++GK++ + +++ +G+ D++ + ++ + +L+++++L
CONSENSUS_2 102 TLSTGKLKVEISKNPFRLVVFRKDGKVLLFEDLGGLGFFDDKPGGDQYLELSFSLPPDEHL 162
d1xsia2 102 EFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETV 162
Subject = d1ujta_ b.1.2.1 KIAA1568 protein
length=107 filtered_length=106 Neff=19.075
Smith-Waterman score = 43 Evalue = 9.28e+00
QUERY 9 DEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEK 49
CONSENSUS_1 8 DEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEK 48
+E++V++++DG++++ + ++ K++++YE+++ ++++ G +
CONSENSUS_2 49 GEWTVVNVVDGSETSYTVTGLKPGTEYEFRVRAVNAAGVGP 89
d1ujta_ 62 SSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102
Subject = d2cb5a_ d.3.1.1 Bleomycin hydrolase
length=453 filtered_length=443 Neff=15.178
Smith-Waterman score = 47 Evalue = 1.02e+01
QUERY 15 ITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEK======ELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 14 ITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEK======EVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
I+ +G +AE+ D G+++ ++ L+G++ D++E+ +VK + +++ ++ Y+++ + ++ V+KK +PK++L++L+
CONSENSUS_2 351 IDLTGLDKAERLDYGESLLDHAMLLVGVGLDDDENGKPPYWKVKNSWGEDWGEKGYFRMSRDWFDEYVYEVVVDKKFLPKELLKVLK 437
d2cb5a_ 351 VSLKNMNKAERLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLE 437
Subject = d1gu3a_ b.18.1.14 Cellulose-binding domain of cellulase C
length=142 filtered_length=140 Neff=13.457
Smith-Waterman score = 42 Evalue = 1.13e+01
QUERY 10 EYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKN 58
CONSENSUS_1 9 EYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKK 57
++++K ++D + + ++NG+ Y++Y + + +++ ++ +++FT++++
CONSENSUS_2 56 SFDAKADADRTIRVKIGLNGDPYTTYLNQTVALTTEWTTYSFTFTMTET 104
d1gu3a_ 56 RYTATASTDVTVRALVGQNGAPYGTVLDTSPALTSEPRQVTETFTASAT 104
Subject = d1cd9b2 b.1.2.1 Granulocyte colony-stimulating factor (GC-S
length=106 filtered_length=106 Neff=18.311
Smith-Waterman score = 42 Evalue = 1.19e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLR 60
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLK 59
+ G++E+ + T+++K+ + + ++ +++++YE+++ ++++ G+++ + + +++
CONSENSUS_2 48 EAGSGEWVKVNTVPVKDTSFTVTGLLPGTEYEFRVRAVNAAGVGEPSEPSEPVTAR 103
d1cd9b2 48 QLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLR 103
Subject = d1uema_ b.1.2.1 KIAA1568 protein
length=105 filtered_length=105 Neff=18.829
Smith-Waterman score = 42 Evalue = 1.25e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGK 47
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGK 46
+ G+D+ + ++T+++K+++ + ++ K++++YE+++ ++++ G+
CONSENSUS_2 43 EAGSDGWVKVVTVPVKETSFTVTGLKPGTEYEFRVRAVNAAGL 85
d1uema_ 55 SQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGL 97
Subject = d1so7a_ b.68.1.1 Sialidase 2 (Neu2)
length=360 filtered_length=357 Neff=18.062
Smith-Waterman score = 47 Evalue = 1.28e+01
QUERY 51 LEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDEL 86
CONSENSUS_1 50 VKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEI 85
+ +++D+K +K +++ LY ++G++ +S+ +++K++
CONSENSUS_2 320 LLYLSDGKDGKEELGCLYEKGGTIEISLSLFSLKDV 355
d1so7a_ 334 LQSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLKQA 369
Subject = d1r6va_ c.41.1.1 Fervidolysin
length=649 filtered_length=633 Neff=17.374
Smith-Waterman score = 48 Evalue = 1.45e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDK==DGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKE 92
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDK==DGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALE 91
++ +++Y+VK++++ +++A +++ G +++G++ +L+ Y+ +G++ + + ++ ++L+++++ ++ + ++ + ++++K++ + +++
CONSENSUS_2 6 SVVPGRYIVKFKDGVSAAALAAALGAVVLGRLGELDVYHLALRGLAVKLLKDVLRLLALPGVKAVEPDVKLKRAKLDALRKDPDVEYVEP 95
d1r6va_ 28 EYTEGKILVGYNDRSEVDKIVKAVNGKVVLELPQIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRK 117
Subject = d1j75a_ a.4.5.19 Dlm-1
length=57 filtered_length=57 Neff=1.982
Smith-Waterman score = 37 Evalue = 1.50e+01
QUERY 61 KEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKL 94
CONSENSUS_1 60 KGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKL 93
++ +L++ + G VK+ + +KK ++PKK L+++
CONSENSUS_2 3 EQRILQVLRDAGGPVKLGQLLKKCQVPKKKLNQV 36
d1j75a_ 3 EQKILQVLSDDGGPVKIGQLVKKCQVPKKTLNQV 36
Subject = d1am2__ b.86.1.2 GyrA intein
length=199 filtered_length=196 Neff=17.378
Smith-Waterman score = 44 Evalue = 1.51e+01
QUERY 27 DNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVS 76
CONSENSUS_1 26 DNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVK 75
++ +++++++++L +D + + ++V++ ++ K+ +++++ ++G+ ++
CONSENSUS_2 24 EGDRVLAVDVLDLLVLDGKLVPSKVTAVFKRGAKE==LYRIRTENGRELR 71
d1am2__ 24 PGARPNSDNAIDLKVLDRHGNPVLADRLFHSGEHP==VYAVRTVEGLRVT 71
Subject = d1ip9a_ d.15.2.2 Bud emergence mediator Bemp1
length=85 filtered_length=82 Neff=11.988
Smith-Waterman score = 38 Evalue = 1.69e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHS 70
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVN 69
++G+D +++++ D + ++ KD K++G ++KLK D+DG+ +++ ++D ++ ++ LKL V+
CONSENSUS_2 18 SFGDDIIRLRLPPDITFEELKDKIAKRFGLDDFKLKYKDEDGDWVTLTSDEDLEEAIERTLKLLVH 83
d1ip9a_ 18 YYKDDIFALMLKGDTTYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQVSNIIQAKLKISVH 83
Subject = d1gv9a_ b.29.1.13 Carbohydrate-recognition domain of P58/ER
length=228 filtered_length=222 Neff=17.631
Smith-Waterman score = 44 Evalue = 1.81e+01
QUERY 11 YYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKV 90
CONSENSUS_1 10 YYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKA 89
+++ I+++G K+++++++G+ +++ ++KL+ ++ +G+ +V ++ D++ ++ + Y +++K+++S+ ++ ++ +P+++
CONSENSUS_2 123 HIGGIDNNGIKSVDSASDGYSDALGGCKLLFLN=SGEPIRVRIDYDGSTLTLSVTLDYLKGKKPLLSCVVDLSIVLPEGV 201
d1gv9a_ 123 AIVVVGNNGQINYDHQNDGATQALASCQRDFRN=KPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQG 201
Subject = d1uena_ b.1.2.1 KIAA0343 protein
length=113 filtered_length=112 Neff=18.402
Smith-Waterman score = 41 Evalue = 1.91e+01
QUERY 14 QITVDGKEVHSKADNGQKYKDYEYKLTGFDKDG 46
CONSENSUS_1 13 KITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDG 45
++++DG++++ + ++ K++++YE+++ ++++ G
CONSENSUS_2 60 VLVVDGTETSYTLTGLKPGTTYEFRVRAFNSVG 92
d1uena_ 72 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKG 104
Subject = d1bpv__ b.1.2.1 Type I titin module
length=95 filtered_length=95 Neff=18.674
Smith-Waterman score = 40 Evalue = 1.98e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGK 47
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGK 46
+ G++E + ++T+++K+ + + ++ K++++YE+++ ++++ G+
CONSENSUS_2 34 EVGSGEWVKVNTVPVKETSFTVTGLKPGTEYEFRVRAVNAAGA 76
d1bpv__ 43 DLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGA 85
Subject = d1m9sa3 b.34.11.1 Internalin B, C-terminal domains
length=86 filtered_length=84 Neff=10.536
Smith-Waterman score = 37 Evalue = 2.26e+01
QUERY 6 MGKDEYYVQITVDGKEVHSKADN==GQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDK 72
CONSENSUS_1 5 YGGDEYYVKITTDGKKVAEKDDN==GKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKG 71
Y + ++ ++ ++++++++++ ++ YG+ ++K+ G KD + KEVK++ K ++G ++++++N++
CONSENSUS_2 2 YDTITSDKAVNLYATITNATGGAIWSAPYGTKGAKKVGSAKDYNGKEVKILREAKTARGTWYQFSLNGK 70
d1m9sa3 2 YDKMEYDKGVTAYARVRNASGNSVWTKPYNTAGAKHVNKLSVYQGKNMRILREAKTPITTWYQFSIGGK 70
Subject = d1gk9.1 d.153.1.2 Penicillin acylase
length=766 filtered_length=764 Neff=15.859
Smith-Waterman score = 46 Evalue = 2.28e+01
QUERY 9 DEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFT=====AQKNLRKEAFLRVYH====SDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 8 DEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFT=====ADKKLKKGAYLKLYV====NKGKGVKSWEEVKKKEIPKKALEKLN 94
D Y K++ D++++ D++ ++++++++++K ++++++++V +T +++ +G+ + L++ ++ + ++++ ++ +++ +++L++L+
CONSENSUS_2 285 DLYVEKLNPDDPLQYLYDGGWRPLEVRTETIKVKGGEPVTLTVYRTRHGPVLSDDDGGGTAYALRWAALGPGDRTLDALLALNRARNLDEFLAALR 380
g1gk9.1 285 DIFAERLSAEKPGYYLHNGKWVKMLSREETITVKNGQAETFTVWRTVHGNILQTDQTTQTAYAKSRAWDGKEVASLLAWTHQMKAKNWQEWTQQAA 380
Subject = d1quqb_ b.40.4.3 Replication protein A 14 KDa (RPA14) subun
length=114 filtered_length=112 Neff=10.250
Smith-Waterman score = 38 Evalue = 2.43e+01
QUERY 38 KLTGFDKDGKEKELEFTAQKNLRKEAFLRV==YHSDKKGVSAWEEVK 82
CONSENSUS_1 37 KLKGYDKDGKEKEVKFTADKKLKKGAYLKL==YVNKGKGVKSWEEVK 81
+L + + DG++ +V+++ + +L +G+Y+++ +VN++ +++ + ++
CONSENSUS_2 38 TLTLSSGDGGNVTVELNPPLDLEIGGYVEVIGKVNGDLTIRALSYID 84
d1quqb_ 38 MFILSDGEGKNGTIELMEPLDEEISGIVEVVGRVTAKATILCTSYVQ 84
Subject = d1n26a3 b.1.2.1 Interleukin-6 receptor alpha chain, domains
length=95 filtered_length=94 Neff=18.404
Smith-Waterman score = 39 Evalue = 2.67e+01
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGK 47
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGK 46
+G++ ++K+++++K+ + + ++ K++++YE+++ ++++ G+
CONSENSUS_2 37 KGSGEWTKVNVTVKETSFTVTGLKPGTEYEFRVRAVNAAGL 77
d1n26a3 46 ERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ 86
Subject = d1wfta_ b.1.2.1 Host cell factor 2, HCF-2
length=110 filtered_length=109 Neff=19.257
Smith-Waterman score = 40 Evalue = 2.82e+01
QUERY 13 VQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDG 46
CONSENSUS_1 12 VKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDG 45
+++T +G++ + + ++ +++++YE+++ ++++ G
CONSENSUS_2 56 TSLTVPGSETSFTVTGLLPGTEYEFRVRAVNAAG 89
d1wfta_ 69 TSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKG 102
Subject = d1ueya_ b.1.2.1 KIAA0343 protein
length=113 filtered_length=112 Neff=19.009
Smith-Waterman score = 40 Evalue = 2.89e+01
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDG 46
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDG 45
+G+ V++T+++K+++ + ++ K++++YE+++ ++++ G
CONSENSUS_2 45 SGEWVRVNVTVVPKETSFTVTGLKPGTEYEFRVRAVNAAG 84
d1ueya_ 59 HKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIG 98
Subject = d1vpma_ d.38.1.1 Acyl-CoA hydrolase BH0798
length=133 filtered_length=132 Neff=17.038
Smith-Waterman score = 40 Evalue = 3.05e+01
QUERY 6 MGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKEL 51
CONSENSUS_1 5 YGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEV 50
++ ++ +++++ + +++ ++++++ + ++++ + D+DGK+++V
CONSENSUS_2 58 VYVGRTSIEVEVEVEAEDLRTGERRLVATALFTFVALDEDGKPVPV 103
d1vpma_ 80 THTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPV 125
Subject = d1v5ja_ b.1.2.1 KIAA1355
length=99 filtered_length=98 Neff=19.031
Smith-Waterman score = 39 Evalue = 3.13e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEK 49
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEK 48
+ GGD +V T++GK+++ + ++ K++++YE+++ ++++ G+ +
CONSENSUS_2 37 EGGGDWWTVVVTVPGKETSFTVTGLKPGTEYEFRVRAVNAAGVGE 81
d1v5ja_ 46 QGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFVSD 90
Subject = d1t0ba_ c.23.16.6 GK2113 homologue
length=240 filtered_length=233 Neff=14.090
Smith-Waterman score = 41 Evalue = 3.16e+01
QUERY 16 TVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKL 94
CONSENSUS_1 15 TTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKL 93
+++G ++A+++++ + G ++ ++ +++G E +V++ +++ ++ + ++++ + V + ++ +E++++++++L
CONSENSUS_2 10 ENGGERHASIPAGIYPDGIHAALAALLEEEGFEVDVATLTED===EAGLTEEKLADYDLVVFLGTGAGDELSDEQVAAL 85
d1t0ba_ 10 EFRHEKKDEQVRAIYPEGMHTVIASYLAEAGFDAATAVLDEP===EHGLTDEVLDRCDVLVWWGHIAHDEVKDEVVERV 85
Subject = d1k12a_ b.18.1.15 Fucose binding lectin
length=158 filtered_length=155 Neff=18.148
Smith-Waterman score = 41 Evalue = 3.17e+01
QUERY 25 KADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWE 79
CONSENSUS_1 24 KDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWE 78
+ D+G+ ++G++++ + + + ++ ++V+++ D+++ + +Y++++ ++++G+ +E
CONSENSUS_2 94 VSDDGTSWDGVNWVKVFTGNSDAGTVVTILLDPPV=VARYVRILPTGSNGLSLAE 147
d1k12a_ 94 IGQHLASNGVNNPECSVIGSMATGETKTFHCPAPM=IGRYVVTYLPTSESLHLCE 147
Subject = d1tdpa_ a.29.8.1 Carnobacteriocin B2 immunity protein
length=111 filtered_length=86 Neff=5.453
Smith-Waterman score = 36 Evalue = 3.38e+01
QUERY 37 YKLTGFDKDGKEKELEFTAQKNL====RKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKE 92
CONSENSUS_1 36 YKLKGYDKDGKEKEVKFTADKKL====KKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALE 91
Y+ + +++D +E+ F+ K+L + G YL++ ++ ++ ++++ ++K ++PK++LE
CONSENSUS_2 16 YNDPEVKADPDLRELLFEYAKELDKGRDVGLYLLVATKLSGLISRYILIHKFQLPKALLE 75
d1tdpa_ 16 YKDPEVKANEFLSKLVVQCAGKLTASNSENSYIEVISLLSRGISSYYLSHKRIIPSSMLT 75
Subject = d1f8ra2 d.16.1.5 L-aminoacid oxidase
length=113 filtered_length=112 Neff=17.589
Smith-Waterman score = 39 Evalue = 3.44e+01
QUERY 53 FTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 52 FTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
+ +++ +G+++ L + G++++ +E+++++E+ + +LE+L+
CONSENSUS_2 37 YYPSYPPDGGGGVLLGFVAGDDARRLEALSDEELVELVLEVLA 79
d1f8ra2 37 YYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLS 79
Subject = d1ky9a2 b.47.1.1 Protease Do (DegP, HtrA), catalytic domain
length=220 filtered_length=220 Neff=12.495
Smith-Waterman score = 40 Evalue = 3.50e+01
QUERY 6 MGKDEYYV====QITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLR 60
CONSENSUS_1 5 YGGDEYYV====KITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLK 59
+++D+ Y+ ++ +++++ +++ ++G++ ++ KL+G+D++ +K++++K+L+
CONSENSUS_2 54 IDADKGYILTNNHVVDGADEITVTLSDGRE===FKAKLVGSDPKTDLAVLKIDGAKNLP 109
d1ky9a2 83 IDADKGYVVTNNHVVDNATVIKVQLSDGRK===FDAKMVGKDPRSDIALIQIQNPKNLT 138
Subject = d1od3a_ b.18.1.10 Putative xylanase
length=132 filtered_length=129 Neff=15.636
Smith-Waterman score = 39 Evalue = 3.53e+01
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAF 64
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAY 63
GG E ++ ++ +++ +N++G++ ++ + ++ + +++++++++ +++ + +
CONSENSUS_2 69 GGIELRLDSVDGTVVGTVAVPNTGGWDTWQTVTGNVTLSAGTHTLRLVFSGGFNLDWL 126
d1od3a_ 69 TTIQVRLGSPSGTLLGTIYVGSTGSFDTYRDVSATISNTAGVKDIVLVFSGPVNVDWF 126
Subject = d1wk0a_ b.1.2.1 Fibronectin type-III domain containing prot
length=124 filtered_length=123 Neff=19.390
Smith-Waterman score = 40 Evalue = 3.57e+01
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDG 46
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDG 45
+G++ V+++++GK+++ + ++ K++++YE+++ +++K G
CONSENSUS_2 54 VGSDEVVVVVVPGKETSFTVTGLKPGTEYEFRVRAVNKAG 93
d1wk0a_ 67 TGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSI 106
Subject = d1mtyb_ a.25.1.2 Methane monooxygenase hydrolase beta subun
length=384 filtered_length=360 Neff=12.158
Smith-Waterman score = 41 Evalue = 3.57e+01
QUERY 9 DEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKEL====EFTAQKNLRKEAFLRVYHSDKKGVSA=WEEVKKDELPAKV 90
CONSENSUS_1 8 DEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEV====KFTADKKLKKGAYLKLYVNKGKGVKS=WEEVKKKEIPKKA 89
+E+ V ++ + +++ + +++++ + +++ + ++++K+ + ++ +F+ +KL ++Y+K+ +K ++V++ ++ ++++++ +++
CONSENSUS_2 45 EEVTVDVQPTPDRHYRPTWDLDWELSFVDGRPLFPKERTALRMSDWYAFRDPFKLWYRTYVKMQAEKERAVYGLLDAFERRGLFENL 131
d1mtyb_ 45 EALTVYAQPNADWIAGGLDWGDWTQKFHGGRPSWGNETTELRTVDWFKHRDPLRRWHAPYVKDKAEEWRYTDRFLQGYSADGQIRAM 131
Subject = d1hn0a2 b.18.1.17 Chondroitin ABC lyase I, N-terminal domai
length=210 filtered_length=197 Neff=3.970
Smith-Waterman score = 39 Evalue = 3.62e+01
QUERY 20 KEVHSKADNGQKYKDYEYKLTG=========FDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVK 91
CONSENSUS_1 19 KKVAEKDDNGKGYGGYEYKLKG=========YDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKAL 90
+ + +++G++ +G++++L++ ++ D + +E++ +++++ + GA+ ++ + G G++S++ V ++++PK+ L
CONSENSUS_2 104 DFGEKLIKSGEPDAGFKVGLNFTGWRAVGVSLNNDLEGREMNGDGFDTNEDGARDGIGGGLGAGLDSLRLVAPDAAPKGRL 184
d1hn0a2 104 DFGEKLISTSEAQAGFKVKLDFTGWRAVGVSLNNDLENREMTLNATNTSSDGTQDSIGRSLGAKVDSIRFKAPSNVSQGEI 184
Subject = d1qg3a1 b.1.2.1 Integrin beta-4 subunit
length=92 filtered_length=91 Neff=18.626
Smith-Waterman score = 38 Evalue = 3.62e+01
QUERY 8 KDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDG 46
CONSENSUS_1 7 GDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDG 45
G++ ++++T+++K+++ + ++ K++++YE+++ ++++ G
CONSENSUS_2 40 GSGEWKVVTVPVKETSFTVTGLKPGTEYEFRVRAVNAAG 78
d1qg3a1 40 GDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQG 78
Subject = d1owwa_ b.1.2.1 Fibronectin, different Fn3 modules
length=93 filtered_length=93 Neff=18.785
Smith-Waterman score = 38 Evalue = 3.86e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTA 55
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTA 54
+ GGD+ + ++T++G++++ + ++ K++++YE+++ ++++ G+ + ++ TA
CONSENSUS_2 39 EVGGDGWVKVVTVPGTETSFTVTGLKPGTEYEFRVRAVNAAGLGEPLEATA 89
d1owwa_ 39 PKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDF 89
Subject = d1wdds_ d.73.1.1 Ribulose 1,5-bisphosphate carboxylase-oxyg
length=122 filtered_length=119 Neff=11.034
Smith-Waterman score = 37 Evalue = 4.10e+01
QUERY 13 VQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQK 57
CONSENSUS_1 12 VKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADK 56
+ +T+++++ AE ++ K+Y G+ +L+G+D+ ++ + ++F + +
CONSENSUS_2 74 FGCTDAAQVLAELEACRKAYPGAYVRLIGFDNVRQVQVLSFIVQR 118
d1wdds_ 74 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYK 118
Subject = d1tkea2 d.67.1.1 Threonyl-tRNA synthetase (ThrRS), second '
length=138 filtered_length=138 Neff=12.906
Smith-Waterman score = 38 Evalue = 4.20e+01
QUERY 52 EFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKL 94
CONSENSUS_1 51 KFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKL 93
+F+ D++L+++++ ++ ++ +K+ ++V++++++++ +L
CONSENSUS_2 19 DFDLDEPLTPEDLEAIEKRMNEIIKANLPVEREVLSREEALEL 61
d1tkea2 43 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARET 85
Subject = d1qwna2 b.30.5.6 Golgi alpha-mannosidase II
length=522 filtered_length=515 Neff=16.641
Smith-Waterman score = 43 Evalue = 4.24e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKEL=EFTAQKNLRKEAFLRVYHSDKK 73
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEV=KFTADKKLKKGAYLKLYVNKGK 72
++ ++++ ++++ ++ KV+++D+++ +++ ++K+ ++++G K++ +++++++++ ++ + LY+++ +
CONSENSUS_2 129 LLSNEDLSISLGRNPVKVVLSDGGEIVLENNYLKVIFDNDTGLLKSITDKESGREVLVKQGFLLYGFEDS 198
d1qwna2 129 LLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLKSIQLTQDSPHVPVHFKFLKYGVRSH 198
Subject = d2hft_1 b.1.2.1 Extracellular region of human tissue factor
length=106 filtered_length=102 Neff=14.461
Smith-Waterman score = 37 Evalue = 4.27e+01
QUERY 13 VQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEK=========ELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVK 91
CONSENSUS_1 12 VKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEK=========EVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKAL 90
V+++ K++ + + ++G ++Y+ ++K Y+++ K++ +++ +++L+ + Y++++++ G+G +W E+++ + ++++
CONSENSUS_2 12 VTVSSLNFKHILEWEPPPGNVTYTVQYKTYGDKWKPVCTNITETECDLTDEILSDLYETYYARVRAELGNGTSAWVESEEFPPLEDTK 99
d2hft_1 12 LTWKSTNFKTILEWEPKPVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPE 99
Subject = d1v7la_ c.8.2.1 Isopropylmalate isomerase LeuD
length=138 filtered_length=136 Neff=13.331
Smith-Waterman score = 38 Evalue = 4.28e+01
QUERY 56 QKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKL 94
CONSENSUS_1 55 DKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKL 93
+++L++G+ L++++++G+++++ ++++ +++P+ LE L
CONSENSUS_2 83 EEALEEGDELTVDLEAGVVKTGGGVLLFELLPEFLLEIL 121
d1v7la_ 107 TEGLKDGDLVTVNWETGEVRKGDEILMFEPLEDFLLEIV 145
Subject = d1n7oa3 b.30.5.2 Hyaluronate lyase
length=274 filtered_length=270 Neff=9.826
Smith-Waterman score = 39 Evalue = 4.47e+01
QUERY 14 QITVDGKEVHSKADNGQKYKDY======EYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEV 81
CONSENSUS_1 13 KITTDGKKVAEKDDNGKGYGGY======EYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEV 80
++ T+ + + ++D+ ++ +GY +++++ + +G+ +++ + +++ +G +++L+++ G + S++ V
CONSENSUS_2 183 NTLTGTRWLFLEGDGSHDNIGYVFPKGSTLTVSKEERTGAWSDINSNGSDDEVTGNFFTLWIDHGPTNASYAYV 256
d1n7oa3 183 KDYPETQSVFLESSDSKKNIGYFFFKKSSISMSKALQKGAWKDINEGQSDKEVENEFLTISQAHKQNGDSYGYM 256
Subject = d1qba_3 c.1.8.6 Bacterial chitobiase (beta-N-acetylhexosami
length=443 filtered_length=440 Neff=15.791
Smith-Waterman score = 42 Evalue = 4.54e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKEL====EFTAQKNLR====KEAFLRVYHSDKKGVSAWEEVKKDELPAKVK 91
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEV====KFTADKKLK====KGAYLKLYVNKGKGVKSWEEVKKKEIPKKAL 90
++GGDE++ +++ ++++K++ GK+Y++++++++ ++K+ + +++ ++++ ++L ++ + +L +++K ++ W+++ +++ +++AL
CONSENSUS_2 198 HIGGDEVPKLGLGASAQDVAKLEKGKLYLDHLLDVGCWAKSPACQAFMKENGLKDLAELQAYFINRLAKILKKKGKKTLIGWDDILTGGLDDNAL 292
d1qba_3 198 HFGGDEAKNIRLGAGYTDKAKPEPGKGIIDQGNEDKPWAKSQVCQTMIKEGKVADMEHLPSYFGQEVSKLVKAHGIDRMQAWQDGLKDAESSKAF 292
Subject = d1p5vb_ b.2.3.2 F1 capsule antigen Caf1
length=136 filtered_length=123 Neff=1.000
Smith-Waterman score = 37 Evalue = 4.67e+01
QUERY 28 NGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDEL 86
CONSENSUS_1 27 NGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEI 85
+G++ G+ + ++++ D++G+ ++FT+++ +++ K++ +++++ + +V+ +++
CONSENSUS_2 36 GGYKTGTTSTSVNFTDAAGDPLYLTFTSQDGNNHQFTTKVIGKDSRDFDISPKVNGENL 94
d1p5vb_ 36 GGYKTGTTSTSVNFTDAAGDPMYLTFTSQDGNNHQFTTKVIGKDSRDFDISPKVNGENL 94
Subject = d1b37a2 d.16.1.5 Polyamine oxidase
length=112 filtered_length=110 Neff=17.555
Smith-Waterman score = 38 Evalue = 4.67e+01
QUERY 53 FTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 52 FTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
+ +++ G+++ L + G++++ +E+++++E+ + +LE+L+
CONSENSUS_2 39 WYDLSPPDGGGGVLLGFVAGDDARRLEALSDEELVELVLELLA 81
d1b37a2 39 WQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLR 81
Subject = d1lwra_ b.1.2.1 Neural cell adhesion molecule 1, NCAM
length=84 filtered_length=84 Neff=18.464
Smith-Waterman score = 37 Evalue = 4.71e+01
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDG 46
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDG 45
+G++ + ++T+++K+ + + ++ K++++YE+++ ++++ G
CONSENSUS_2 31 KGGDWWKVVTVPVKETSFTVTGLKPGTEYEFRVRAVNAAG 70
d1lwra_ 43 LASEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQG 82
Subject = d1bqua2 b.1.2.1 Cytokine receptor gp130 cytokine-binding do
length=104 filtered_length=103 Neff=18.942
Smith-Waterman score = 38 Evalue = 4.81e+01
QUERY 14 QITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGK 47
CONSENSUS_1 13 KITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGK 46
++++++K+++ + ++ K++++YE+++ ++++ G+
CONSENSUS_2 46 VEVVSVKETSFTVTGLKPGTEYEFRVRAVNAAGV 79
d1bqua2 57 PEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGK 90
Subject = d1h6oa_ a.146.1.1 TRF1
length=204 filtered_length=198 Neff=5.884
Smith-Waterman score = 38 Evalue = 4.92e+01
QUERY 12 YVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKK 83
CONSENSUS_1 11 YVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKK 82
++ ++GK + + DN+++++ E L++++ +KE++ ++ ++L K + + + ++KG++ ++ E +K+
CONSENSUS_2 67 FLSRIEEGKNLDCTFDNDARLTPLESALGVWELIEKEFDKLHEEIRDLLKIQAVAVCIEKGEFKEAEEILKR 138
d1h6oa_ 67 FLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVFER 138
Subject = d1tova_ b.34.10.1 Cytoskeleton-associated protein F53F4.3
length=98 filtered_length=95 Neff=13.526
Smith-Waterman score = 36 Evalue = 4.93e+01
QUERY 38 KLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSA 77
CONSENSUS_1 37 KLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKS 76
+++G +++G+ +V + ++ + ++G ++ + +++ +G +
CONSENSUS_2 22 EVTGGGGGGRRGTVRYVGPVDFAPGIWVGVELDEPLGKND 61
d1tova_ 22 EVTVGAQMARRGEVAYVGATKFKEGVWVGVKYDEPVGKND 61
Subject = d1rblm_ d.73.1.1 Ribulose 1,5-bisphosphate carboxylase-oxyg
length=109 filtered_length=107 Neff=11.103
Smith-Waterman score = 36 Evalue = 4.99e+01
QUERY 13 VQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKN 58
CONSENSUS_1 12 VKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKK 57
+ +T+++++ AE ++ K+Y G+ +L+G+D+ ++ + ++F + ++
CONSENSUS_2 62 FGCTDAAQVLAELEACLKEYPGAYVRLIGFDNVRQVQVLSFIVYRP 107
d1rblm_ 62 FACAAPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTSSFIVHRP 107
Subject = d1mwva1 a.93.1.3 Catalase-peroxidase KatG
length=377 filtered_length=376 Neff=15.117
Smith-Waterman score = 41 Evalue = 5.04e+01
QUERY 10 EYYVQITVDGKEVHSKADNGQKYKDYEYK===LTGFDKDGKEKELEFTAQKNLRKE====AFLRVYHSD=====KKGVSAWEEV 81
CONSENSUS_1 9 EYYVKITTDGKKVAEKDDNGKGYGGYEYK===LKGYDKDGKEKEVKFTADKKLKKG====AYLKLYVNK=====GKGVKSWEEV 80
+Y+V + + + + ++++++++ + + +++DK+GK+K + +T+D L + A++++Y+++ ++ +++W+++
CONSENSUS_2 277 DYFVNLLDGEGEWKKSPAGANQWEPVDGEDLVPDADDKTGKVKWTLLTSDLVLGSDPELRAIVEVYADNQEKFFDDFAAAWVKL 360
d1mwva1 306 NFFENLFGYEWELTKSPAGAHQWVAKGADAVIPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKL 389
Subject = d1c3ga1 b.4.1.1 Heat shock protein 40 Sis1
length=53 filtered_length=52 Neff=13.942
Smith-Waterman score = 34 Evalue = 5.15e+01
QUERY 43 DKDGKEKELEFTAQKNLRKEAFLRV 67
CONSENSUS_1 42 DKDGKEKEVKFTADKKLKKGAYLKL 66
+ +G+EK++K++ +K+G+ ++L
CONSENSUS_2 3 GGVGREKTLKVKIPAGVKDGTRIRL 27
d1c3ga1 30 HGASEKTQIDIQLKPGWKAGTKITY 54
Subject = d1v43a2 b.40.6.3 Hypothetical protein PH0022, C-terminal do
length=61 filtered_length=61 Neff=15.820
Smith-Waterman score = 35 Evalue = 5.22e+01
QUERY 36 EYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKK 73
CONSENSUS_1 35 EYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGK 72
+ +L + +G+E +++++++++L++G+ ++L+++ +K
CONSENSUS_2 11 AETLLYLRLGGEELVARLPGRLALRPGDTVRLALDPAK 48
d1v43a2 20 TDTILHVKFGDELVKVKLPGHIPIEPGREVKVIMDLDM 57
Subject = d1vpba_ d.283.1.1 Putative modulator of DNA gyrase BT3649
length=424 filtered_length=423 Neff=17.355
Smith-Waterman score = 42 Evalue = 5.36e+01
QUERY 22 VHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 21 VAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
++ ++D + + +++ +L + ++G+ ++V+++ D+ + ++++V+++ G+ S ++++++++ K +++ L+
CONSENSUS_2 3 LKLGADYAEVRLERSRSLSVRVRNGEVETVSSSRDRGV====GVRVIVGGRVGFASTSDLSEEALEKAVERALA 72
d1vpba_ 18 LKNGCQAAKVLLYSSSNTSFELRDAKMDRLQQASEGGL====SLSLYVDGRYGSISTNRLNRKELETFIKNGID 87
Subject = d1wfua_ b.1.2.1 Fibronectin type 3 and ankyrin repeat domai
length=108 filtered_length=107 Neff=19.308
Smith-Waterman score = 38 Evalue = 5.37e+01
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGK 47
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGK 46
G+++ +++++GK+++ + ++ K++++YE+++ ++++ G+
CONSENSUS_2 48 GEWVKVNVVVVPGKETSFTVTGLKPGTEYEFRVRAVNAAGL 88
d1wfua_ 60 DPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGE 100
Subject = d1dfca1 b.42.5.1 Fascin
length=133 filtered_length=125 Neff=13.784
Smith-Waterman score = 37 Evalue = 5.58e+01
QUERY 12 YVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDK 72
CONSENSUS_1 11 YVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKG 71
Y+ +++DG V+ D+ ++ +++ + + ++D+ +++V +++ + G YL ++ +++
CONSENSUS_2 16 YLTAEDDGGTVIANRDGLGKWEVWTLEPV==PDDKGGSVVALKSAN====GRYLSADKDGL 70
d1dfca1 16 YLTAEAFGFKVNASASSLKKKQIWTLEQP==PDEAGSAAVCLRSHL====GRYLAADKDGN 70
Subject = d1soxa1 b.1.18.6 Sulfite oxidase, C-terminal domain
length=123 filtered_length=122 Neff=14.189
Smith-Waterman score = 37 Evalue = 5.59e+01
QUERY 18 DGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTA 55
CONSENSUS_1 17 DGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTA 54
+++ +++++++GK++ +++++L++ ++G+E+E+ A
CONSENSUS_2 51 EARLDGPEGPPGKRWAWRLWSLDVDLPAGGELELLVRA 88
d1soxa1 51 VARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKA 88
Subject = d1ll8a_ d.110.3.5 N-terminal PAS domain of Pas kinase
length=114 filtered_length=113 Neff=19.035
Smith-Waterman score = 38 Evalue = 5.73e+01
QUERY 21 EVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYH 69
CONSENSUS_1 20 KVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYV 68
+++ + ++G++ +G+E++L +++KDG+ V+++++ +G+ L L +
CONSENSUS_2 60 LERLLAAGGGRGLGFEGELRLRRKDGSLFPVELSISPLRDDGGELFLGI 108
d1ll8a_ 60 SEEHMEADGHAAVVFGTVVDIISRSGEKIPVSVWMKRMRQERRLCCVVV 108
Subject = d1nbfa_ d.3.1.9 Ubiquitin carboxyl-terminal hydrolase 7 (US
length=318 filtered_length=317 Neff=17.404
Smith-Waterman score = 41 Evalue = 5.88e+01
QUERY 61 KEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 60 KGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
++AYL +YV K++ + +EV+++EIPK ++E+++
CONSENSUS_2 275 SSAYLLFYVRKDELEEILKEVSEEEIPKHLKEEIE 309
d1nbfa_ 304 TNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQ 338
Subject = d1jtgb_ d.98.1.1 beta-lactamase-inhibitor protein, BLIP
length=165 filtered_length=154 Neff=2.117
Smith-Waterman score = 37 Evalue = 5.91e+01
QUERY 16 TVDGKEVHSKADNGQK~YKDYEYKLTGFDKDGKEKELEFTAQKNL 59
CONSENSUS_1 15 TTDGKKVAEKDDNGKG~YGGYEYKLKGYDKDGKEKEVKFTADKKL 58
+T G +++ + G++ +++Y Y G++++ ++ ++ ++++KL
CONSENSUS_2 31 DTGGDFGDRILCFGHP.GDYYGYGGFGFFDAADDGKLWHKRQEKL 75
d1jtgb_ 31 ETGGSFGDSIHCRGHAaGDYYAYATFGFTSAAADAKVDSKSQEKL 75
Subject = d1kb9a2 d.185.1.1 Cytochrome bc1 core subunit 1
length=205 filtered_length=203 Neff=18.197
Smith-Waterman score = 40 Evalue = 5.97e+01
QUERY 44 KDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKD 84
CONSENSUS_1 43 KDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKK 83
++ + ++VK A+K LK+++++ ++V + +++ ++E+++++
CONSENSUS_2 159 DAVTAEDVKRVAKKYLKPDNLTVVVVGPLEKLPDLEKIRAA 199
d1kb9a2 172 DAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSD 212
Subject = d1b5ta_ c.1.23.1 Methylenetetrahydrofolate reductase
length=275 filtered_length=272 Neff=16.129
Smith-Waterman score = 40 Evalue = 6.07e+01
QUERY 10 EYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVY=HSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 9 EYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLY=VNKGKGVKSWEEVKKKEIPKKALEKLN 94
E+++++++ ++++ ++ + + ++ ++ ++D D + ++ +++++++ ++ + +++ K+++ ++++ +IP+++L++L+
CONSENSUS_2 134 EGHPEAPDLEADLERLKRKVDAGADFIITQLFFDADAFLRFLDRLRAAGIDVPIIPGIMPITSLKQLLRFAKLCGVSIPDELLKRLE 220
d1b5ta_ 134 EVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFD 220
Subject = d1hh1a_ c.52.1.18 Archaeal Holliday junction resolvase Hjc
length=132 filtered_length=129 Neff=6.806
Smith-Waterman score = 36 Evalue = 6.09e+01
QUERY 59 LRKEAFLRVYHSDKKGVSAWEEVKKDEL 86
CONSENSUS_1 58 LKKGAYLKLYVNKGKGVKSWEEVKKKEI 85
+K+G +L + V+ ++G K+ +++K+++
CONSENSUS_2 38 GKGGVVLAIEVKSTSGWKDKIYIDKEQV 65
d1hh1a_ 38 LKNGVIILIEMKSRKDIEGKIYVRREQA 65
Subject = d1v9ya_ d.110.3.2 Direct oxygen sensor protein, DOS
length=96 filtered_length=96 Neff=19.458
Smith-Waterman score = 37 Evalue = 6.24e+01
QUERY 21 EVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQ 56
CONSENSUS_1 20 KVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTAD 55
+++ + ++ +++GG++++L G++KDG++ V ++++
CONSENSUS_2 45 LRRALAGGRARLGGWRGELRGRRKDGSLFWVELSIS 80
d1v9ya_ 62 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS 97
Subject = d1qg3a2 b.1.2.1 Integrin beta-4 subunit
length=103 filtered_length=102 Neff=18.539
Smith-Waterman score = 37 Evalue = 6.36e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEK 49
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEK 48
+ G ++++ ++++++K+ + + ++ K++++YE+++ ++++ G +
CONSENSUS_2 47 EEGAGRWVKVNVVPVKETSFTVTGLKPGTEYEFRVRAVNAAGVGE 91
d1qg3a2 47 NRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGP 91
Subject = d3lkfa_ f.6.1.1 Leukocidin F (HlgB)
length=299 filtered_length=293 Neff=8.188
Smith-Waterman score = 38 Evalue = 6.45e+01
QUERY 16 TVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDE 85
CONSENSUS_1 15 TTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKE 84
++ +++ ++++D++K Y++++++ + DKD+ ++ ++F+ ++ K ++ ++L ++G + + +++KK+
CONSENSUS_2 3 SKTPTSIEDIGDGIKVYKRTLTTSD==DKDNITQSLQFDFIDDPKYDKDALLIKTGGSINSGTKKYNKKG 70
d3lkfa_ 3 KITPVSVKKVDDKVTLYKTTATADS==DKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPND 70
Subject = d1cd1a2 d.19.1.1 CD1, alpha-1 and alpha-2 domains
length=179 filtered_length=177 Neff=3.672
Smith-Waterman score = 37 Evalue = 6.49e+01
QUERY 44 KDGKEKELEFTAQKNLRKEAFLRVY===HSDKKGVSAWEEVKKDELPAKVK 91
CONSENSUS_1 43 KDGKEKEVKFTADKKLKKGAYLKLY===VNKGKGVKSWEEVKKKEIPKKAL 90
+++ ++++ + + +L ++ +L+ Y +++GK+++++++ +++ ++ +A+
CONSENSUS_2 85 SEAGSHTIQLMYGCDLGPDGLLRGYDQFAYDGKDYIALNGDSWTAADLAAQ 135
d1cd1a2 85 KEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPS 135
Subject = d1fnf_2 b.1.2.1 Fibronectin, different Fn3 modules
length=78 filtered_length=77 Neff=19.013
Smith-Waterman score = 36 Evalue = 6.49e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELE 52
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVK 51
+ G+++ + ++T++G++ + + ++ K++++YE+++ ++++ G+ + ++
CONSENSUS_2 25 EVGSGGWVKVLTVPGTETSFTVTGLKPGTEYEFRVRAVNAAGLGEPSE 72
d1fnf_2 38 PVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR 85
Subject = d1pk6a_ b.22.1.1 Complement c1q globular head, A chain
length=133 filtered_length=132 Neff=14.629
Smith-Waterman score = 37 Evalue = 6.50e+01
QUERY 13 VQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSA 77
CONSENSUS_1 12 VKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKS 76
+++T +G+++ + NG+G + ++ ++++G ++++ ++ +L+KG + L++++G+G+++
CONSENSUS_2 52 FHVTFSGNLKLGLLLNGNGVLVAVLSFYDPASGGNLDVASGSVVLQLEKGDEVWLRLTRGNGGIY 116
d1pk6a_ 52 FQVLSQWEICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIY 116
Subject = d1fnha2 b.1.2.1 Fibronectin, different Fn3 modules
length=81 filtered_length=81 Neff=18.926
Smith-Waterman score = 36 Evalue = 6.78e+01
QUERY 8 KDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTA 55
CONSENSUS_1 7 GDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTA 54
G++ +V++T++G++ + + ++ +++++YE+++ ++++ G+ + ++ ++
CONSENSUS_2 31 GGGEWVEVTVPGTETSFTVTGLLPGTEYEFRVRAVNAAGLGEPLEVSV 78
d1fnha2 40 NGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDA 87
Subject = d1wj3a_ b.1.2.1 Contactin 3 (KIAA1496)
length=105 filtered_length=104 Neff=18.885
Smith-Waterman score = 37 Evalue = 6.82e+01
QUERY 14 QITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEK 49
CONSENSUS_1 13 KITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEK 48
++++++++++ + ++ K++++YE+++ ++++ G +
CONSENSUS_2 52 EWKVVTTSTSYTVTGLKPGTEYEFRVRAVNSAGDGP 87
d1wj3a_ 64 NVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGT 99
Subject = d1s3ea2 d.16.1.5 Monoamine oxidase B
length=112 filtered_length=111 Neff=17.811
Smith-Waterman score = 37 Evalue = 6.83e+01
QUERY 36 EYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 35 EYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
++ + ++ +D + + + + + G+++ L + G++++ +E+++++E+ + +LE+L+
CONSENSUS_2 21 GLSGGLLSDDLLGRLIYIFDNSPPDGGGGVLLGFVAGDDARRLEALSDEELVELVLELLA 80
d1s3ea2 21 DYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYA 80
Subject = d2fnba_ b.1.2.1 Fibronectin, different Fn3 modules
length=83 filtered_length=82 Neff=18.988
Smith-Waterman score = 36 Evalue = 6.90e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELE 52
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVK 51
+ G++E ++T+++K+ + + ++ K++++YE+++ ++++ G+ + ++
CONSENSUS_2 31 EVGSGEWVKVNTVPVKETSFTVTGLKPGTEYEFRVRAVNAAGLGEPSE 78
d2fnba_ 43 AAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTT 90
Subject = d1cfb_1 b.1.2.1 Neuroglian, two amino proximal Fn3 repeats
length=88 filtered_length=88 Neff=18.648
Smith-Waterman score = 36 Evalue = 7.10e+01
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLR 60
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLK 59
+++ + V+ T+++K+++ + ++ K++++YE+++ ++++ G+ + + + K
CONSENSUS_2 35 SDEWVRVVLTVVPKETSFTVTGLKPGTEYEFRVRAVNAAGLGEPSEPSEVVTAK 88
d1cfb_1 47 TPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQ 100
Subject = d1g2914 b.40.6.3 Maltose transport protein MalK, C-terminal
length=44 filtered_length=44 Neff=16.477
Smith-Waterman score = 33 Evalue = 7.11e+01
QUERY 45 DGKEKELEFTAQKNLRKEAFLRVYHSDKK 73
CONSENSUS_1 44 DGKEKEVKFTADKKLKKGAYLKLYVNKGK 72
+G+E +++++++++L++G+ ++L+++ +K
CONSENSUS_2 3 GGEELVARLPGRVALRPGDTVRLALDPAK 31
d1g2914 30 GGVTFVGSFRSESRVREGVEVDVVFDMKK 58
Subject = d1sqja2 b.69.13.1 Oligoxyloglucan reducing end-specific cel
length=356 filtered_length=353 Neff=20.654
Smith-Waterman score = 42 Evalue = 7.22e+01
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVK 82
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVK 81
GGD ++ + T+ G++ + ++++ +G+GG+++ +++G ++ + ++++ +LY++ +G K+W++++
CONSENSUS_2 277 GGDGGLYRSTDGGATWTRLSLGLPGGGGGSALAVDPADPG===LLYVGTGGGGLLYGDGTLYRSTDGG=KTWTALS 348
d1sqja2 277 GSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEADPKVYG===RVYLGTNGRGIVYADLTNKKSNEEK=STAKCAN 348
Subject = d1vkda_ b.67.2.4 Hypothetical protein TM1225
length=327 filtered_length=314 Neff=19.427
Smith-Waterman score = 41 Evalue = 7.45e+01
QUERY 11 YYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDG=======KEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKK 83
CONSENSUS_1 10 YYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDG=======KEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKK 82
+Y+ +++ + ++D++++++ ++ L++ + D+ ++K + + ++++ ++G++ ++++ +++ +++W+ +++
CONSENSUS_2 120 LYTGNDGGQVIGLATSDDLGTWTKLGVILVPDGRDPSLFWDKDDGKWYLLIGARGGDLGGGGRILLYRSDDLLNWTLLGP 199
d1vkda_ 120 TFCTDDHGPTIGVGMTKDFKTFVRLPNAYVPFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIFLSESPDMIHWGNHRF 199
Subject = d1oxxk1 b.40.6.3 Glucose transport protein GlcV, N-terminal
length=101 filtered_length=101 Neff=17.188
Smith-Waterman score = 36 Evalue = 7.68e+01
QUERY 36 EYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKK 73
CONSENSUS_1 35 EYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGK 72
+++L + +G+E ++ ++++++L++G+ ++L+++++K
CONSENSUS_2 58 AETLLHLRLGGEELVARLPGRLALRPGDTVRLALDPEK 95
d1oxxk1 67 GLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDK 104
Subject = d1vq0a1 d.193.1.1 Heat shock protein 33, Hsp33
length=230 filtered_length=229 Neff=13.895
Smith-Waterman score = 38 Evalue = 7.76e+01
QUERY 44 KDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 43 KDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
K + ++++++D +L+ +L + ++ + +V ++ + +++E+P++A++KL+
CONSENSUS_2 55 KFDGRLTLQIQGDGPLG===LLVVEADADGEVRGYVRNPEVELPLNAAGKLD 103
d1vq0a1 55 AEKERWTLDIEGNGPIR===RVVAQSTSEFTVRGYVANPKVELPLNEKGKFD 103
Subject = d1krha1 b.43.4.2 Benzoate dioxygenase reductase
length=71 filtered_length=71 Neff=13.845
Smith-Waterman score = 34 Evalue = 7.77e+01
QUERY 58 NLRKEAFLRVYHSDKKGVSAW 78
CONSENSUS_1 57 KLKKGAYLKLYVNKGKGVKSW 77
++++G+YL L++++++++ S+
CONSENSUS_2 4 AFLPGQYLDLRLPGEGLRRSY 24
d1krha1 33 HFLAGQYVNVTLPGTTETRSY 53
Subject = d1mi8a_ b.86.1.2 DnaB intein
length=158 filtered_length=156 Neff=17.840
Smith-Waterman score = 38 Evalue = 7.97e+01
QUERY 15 ITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLR 60
CONSENSUS_1 14 ITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLK 59
++++G++V + D++G+++++++ + ++D + +++++ +++L+
CONSENSUS_2 25 VEKVGDRVLSLDEEGGKLVLSRVTAVLRRGDKELVRIRTENGRELR 70
d1mi8a_ 25 LDEKDFEIWAINEQTMKLESAKVSRVFMTGKKLVYILKTRLGRTIK 70
Subject = d2pia_1 b.43.4.2 Phthalate dioxygenase reductase
length=71 filtered_length=70 Neff=14.586
Smith-Waterman score = 34 Evalue = 8.13e+01
QUERY 12 YVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVY 68
CONSENSUS_1 11 YVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLY 67
++ ++ +G+++ + + + +++++ ++ +++ ++ ++LK+G+ L+++
CONSENSUS_2 12 HLDLRLPGGLIRSYSLSSAPSDRGRLRI=AVKRVPGGRGGSNYLHDNLKVGDVLEVS 67
d2pia_1 44 NLTVAVPNGSRRTYSLCNDSQERNRYVI=AVKRDSNGRGGSISFIDDTSEGDAVEVS 99
Subject = d1je5a_ b.40.4.7 gp2.5
length=197 filtered_length=185 Neff=19.135
Smith-Waterman score = 39 Evalue = 8.15e+01
QUERY 24 SKADNGQKYKDYEYKLTGFDKDGKEKELE 52
CONSENSUS_1 23 EKDDNGKGYGGYEYKLKGYDKDGKEKEVK 51
+ ++++ + G+Y+ +L++++++G+ + +
CONSENSUS_2 112 GDGEQNPTHGTYTVTLTVTNAAGSDTATV 140
d1je5a_ 112 ASFQDKKTKETKHINLVVVDSKGKKMEDV 140
Subject = d1chua2 c.3.1.4 L-aspartate oxidase
length=277 filtered_length=276 Neff=13.167
Smith-Waterman score = 38 Evalue = 8.24e+01
QUERY 9 DEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVY 68
CONSENSUS_1 8 DEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLY 67
+E+ V+ ++D + ++++ +++ +GG +++ +++ +D +++ T+ ++++K+ ++++
CONSENSUS_2 68 IELGVPFDRDEDGKIGGRLHLRREGGHSHRRILHAADRTGRAILRTLLERVLKHPNIEVL 127
d1chua2 97 IDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVL 156
Subject = d1qfha1 b.1.18.10 F-actin cross-linking gelation factor (AB
length=104 filtered_length=103 Neff=17.650
Smith-Waterman score = 36 Evalue = 8.31e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSD 71
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNK 70
++GG+E V++T++ ++V+E +G G+Y+ +++ +++ + +VKF+ ++++ +G+ +K++V++
CONSENSUS_2 40 KAGGGELEVEVTGPSGAVVEVEVKDNGDGTYSVSYTPTEPGDYTVSVKFG=GQHI=PGSPFKVKVVD 104
d1qfha1 40 TDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLR=GNPI=KNMPIDVKCIE 104
Subject = d1jj2k_ c.12.1.1 Ribosomal protein L15 (L15p)
length=150 filtered_length=147 Neff=15.857
Smith-Waterman score = 37 Evalue = 8.37e+01
QUERY 43 DKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKL 94
CONSENSUS_1 42 DKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKL 93
++DG+ +++++A+ KK Y+K+ +++ ++ VK + + K+A+EK+
CONSENSUS_2 84 IEDGVILVDLLAAGLIKKKLGYVKVLGKGE==LTKPLTVKAHAFSKSAIEKI 133
d1jj2k_ 84 VEDGGFRVDVRDVVEEADDADYVKVLGAGQ==VRHELTLIADDFSEGAREKV 133
Subject = d1iarb2 b.1.2.1 Interleukin-4 receptor alpha chain
length=101 filtered_length=100 Neff=18.320
Smith-Waterman score = 36 Evalue = 8.42e+01
QUERY 7 GKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGK 47
CONSENSUS_1 6 GGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGK 46
++ + +V++++++K+ + + ++ K++++YE+++ +++K G+
CONSENSUS_2 48 DEWTKVVEVLLPVKSTSFTVTGLKPGTEYEFRVRAVNKAGV 88
d1iarb2 48 PADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYN 88
Subject = d1k85a_ b.1.2.1 Fibronectin type III domain from chitinase
length=77 filtered_length=76 Neff=18.474
Smith-Waterman score = 35 Evalue = 8.67e+01
QUERY 14 QITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELE 52
CONSENSUS_1 13 KITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVK 51
K +++++ + ++++ K++++YE+++ ++++ G++ +
CONSENSUS_2 32 KKVVTVTDTSFTVTGLKPGTEYEFRVRAVNAAGVGGPSS 70
d1k85a_ 43 ALATTVTGTTATISGLAADTSYTFTVKAKDAAGNVSAAS 81
Subject = d1qr4a2 b.1.2.1 Tenascin
length=75 filtered_length=74 Neff=19.095
Smith-Waterman score = 35 Evalue = 8.94e+01
QUERY 8 KDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELE 52
CONSENSUS_1 7 GDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVK 51
G++ +V++T++G++ + + ++ +++++YE+++ ++++ G+ + ++
CONSENSUS_2 26 GGGEWVEVTVPGTETSFTVTGLLPGTEYEFRVRAVNAAGLGEPLE 70
d1qr4a2 39 TGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPIS 83
Subject = d1fnf_3 b.1.2.1 Fibronectin, different Fn3 modules
length=76 filtered_length=75 Neff=19.000
Smith-Waterman score = 35 Evalue = 8.99e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELE 52
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVK 51
+ GG++ ++T++G++ + + ++ +++++YE+++ ++++ G+ + ++
CONSENSUS_2 24 EVGGGGWVKVLTVPGDETSFTLTGLLPGTEYEFRVRAVNAAGLGEPLE 71
d1fnf_3 37 PEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI 84
Subject = d1fnha1 b.1.2.1 Fibronectin, different Fn3 modules
length=78 filtered_length=78 Neff=18.731
Smith-Waterman score = 35 Evalue = 9.11e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELE 52
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVK 51
+ GG++ + ++T++G++ + + ++ +++++YE+++ ++++ G+ + ++
CONSENSUS_2 24 EVGGGGWVKVVTVPGDETSFTVTGLLPGTEYEFRVRAVNAAGLGEPSE 71
d1fnha1 36 PKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQ 83
Subject = d1jj2e1 d.141.1.1 Ribosomal protein L6
length=79 filtered_length=78 Neff=14.923
Smith-Waterman score = 34 Evalue = 9.31e+01
QUERY 13 VQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKN 58
CONSENSUS_1 12 VKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKK 57
V++T +G++V+ K++ G+ ++++ + ++ ++++ +V+ D+K
CONSENSUS_2 11 VEVTLKGNVVTVKGPKGELSRTLPHPGVEIKLEDGKLVVARADDSK 56
d1jj2e1 11 VDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNA 56
Subject = d1jgta2 d.153.1.1 beta-Lactam synthetase
length=189 filtered_length=188 Neff=14.298
Smith-Waterman score = 37 Evalue = 9.34e+01
QUERY 38 KLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVS 76
CONSENSUS_1 37 KLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVK 75
+ +++ ++G+ +++++ ++L++G++L+++ ++ + ++
CONSENSUS_2 146 DRVALLDYGDLAVIGAKGVRELEPGELLVIDRGGLRSEI 184
d1jgta2 163 DPKGFPLADARRVAGLTGVYQVPAGAVMDIDLGSGTAVT 201
Subject = d1nls__ b.29.1.1 Concanavalin A
length=237 filtered_length=234 Neff=15.654
Smith-Waterman score = 38 Evalue = 9.34e+01
QUERY 21 EVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEV 81
CONSENSUS_1 20 KVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEV 80
++++++ + + + + +++ ++++ ++K++ +++D ++ ++++L+L+ ++++G+ + V
CONSENSUS_2 110 SFTSLLLLLLLNVASLLDFFFNYFGFNGKNLILQGDATVSSDGLLQLTNDTNNGKPLVRSV 170
d1nls__ 110 SFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSV 170
Subject = d1e2ta_ d.3.1.5 Arylamine N-acetyltransferase
length=274 filtered_length=267 Neff=14.779
Smith-Waterman score = 38 Evalue = 9.40e+01
QUERY 25 KADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRK==EAFLRVYHSDKKGVSAWEEVKK 83
CONSENSUS_1 24 KDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKK==GAYLKLYVNKGKGVKSWEEVKK 82
++ +G+ ++ ++ +L+ +D++G+++E ++T +++L++ ++Y+ +++++ ++ + ++ +
CONSENSUS_2 209 LLPDGGRVTLVNNRLTIVDGGGEVEERTLTDEDELLEVLKEYFGIDLPDLERAAIEGRLAA 269
d1e2ta_ 209 HLPDGGKLTLTNFHFTRYHQGHAVEQVNVPDVPSLYQLLQQQFGLGVNDVKHGFTEAELAA 269
Subject = d1ten__ b.1.2.1 Tenascin
length=80 filtered_length=79 Neff=19.139
Smith-Waterman score = 35 Evalue = 9.59e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELE 52
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVK 51
+ GG++ ++T++G++ + + ++ +++++YE+++ ++++ G+ + ++
CONSENSUS_2 28 EVGGGGWVKVVTVPGTETSFTVTGLLPGTEYEFRVRAVNAAGLGEPSE 75
d1ten__ 38 IKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGDMSSNPAK 85
Subject = d1rifa_ c.37.1.23 DNA helicase UvsW
length=282 filtered_length=267 Neff=11.757
Smith-Waterman score = 37 Evalue = 9.67e+01
QUERY 20 KEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 19 KKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
++ + K ++ ++ ++++++ + Y+++ + ++++ + + +++K+ +++++++++ K ++ + ++P+++L+ ++
CONSENSUS_2 32 ENDGAKFNKRLRKDLWDLRKNFYVEHPELASLTEEEVINFRKELDITVEGSGVPVPKPILSFEELGLPEELLKAIK 107
d1rifa_ 32 EADGYRFNPRFRYGNWDGRIRLLDYNRLLPFGLVGQIKKFCDNFGYKAWIDPQINEKEELSRKDFDEWLSKLEIYS 107
Subject = d1or0.1 d.153.1.2 Cephalosporin acylase
length=675 filtered_length=669 Neff=15.845
Smith-Waterman score = 40 Evalue = 9.71e+01
QUERY 9 DEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELEFTAQK=======NLRKEAFLRVYH===SDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 8 DEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVKFTADK=======KLKKGAYLKLYV===NKGKGVKSWEEVKKKEIPKKALEKLN 94
D Y +K++ D +++++ ++++ +++++K+ ++D++ ++V++T + + +G+ L L++ ++++ ++++ ++ +++ ++++++L+
CONSENSUS_2 231 DLYVLKLNPDDYLYDGGW===RPLEVRTETIKVKGGDPILADVTLTVRRTRHGPVLDDDGGTALALRWAALDPDRTLLALLALNRARNLEEFRAALR 324
g1or0.1 231 TNYRLTLQDGGYLYDGQV===RPFERPQASYRLRQADGTTVDKPLEIRSSVHGPVFERADGTAVAVRVAGLDRPGMLEQYFDMITADSFDDYEAALA 324
Subject = d1kica_ c.70.1.1 Inosine-adenosine-guanosine preferring nuc
length=327 filtered_length=326 Neff=16.730
Smith-Waterman score = 39 Evalue = 9.72e+01
QUERY 45 DGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDELPAKVKEKLG 95
CONSENSUS_1 44 DGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEIPKKALEKLN 94
+ ++ V++++D++L +G+ + + ++++ V+ +V+++++ + +L+ L+
CONSENSUS_2 275 TTERLPVDVETDGELTRGQTVVDPRGRPPNVRVVLDVDADAFLDLLLDLLA 325
d1kica_ 275 NVDPVPIDVVVDKQPNEGATVRTDAENYPLTFVARNPEAEFFLDMLLRSAR 325
Subject = d1h8ua_ d.169.1.1 Eosinophil major basic protein
length=96 filtered_length=95 Neff=17.189
Smith-Waterman score = 35 Evalue = 9.73e+01
QUERY 33 KDYEYKLTGFDKDGKEKELEFTAQKNLRKEAFLRVYHSDKKGVSAWEEVKKDEL 86
CONSENSUS_1 32 GGYEYKLKGYDKDGKEKEVKFTADKKLKKGAYLKLYVNKGKGVKSWEEVKKKEI 85
+ ++ +L + +++ + + ++ +++K + + ++ L++N++++ SW+ ++ + +
CONSENSUS_2 1 ELLGGHLVSIHSEEENAFLASLVKKSGGGDVWIGLGLNDLGKEGSWRWSDGSPL 54
d1h8ua_ 20 RCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSGRCRRFQWVDGSRW 73
Subject = d1u0ka2 d.21.1.2 Hypothetical protein PA4716
length=153 filtered_length=151 Neff=17.146
Smith-Waterman score = 37 Evalue = 9.79e+01
QUERY 47 KEKELEFTAQKNLRKEAFLRVYHSDKKGVS 76
CONSENSUS_1 46 KEKEVKFTADKKLKKGAYLKLYVNKGKGVK 75
++++++++ + L++G+ L+++++++++V+
CONSENSUS_2 108 GKAALLASQGSALGRGGRLEVELDGDGRVL 137
d1u0ka2 108 RGEPFVLHQGRFLERPSRLDVQVATDGSVR 137
Subject = d1j8ka_ b.1.2.1 Fibronectin, different Fn3 modules
length=83 filtered_length=83 Neff=18.928
Smith-Waterman score = 35 Evalue = 9.83e+01
QUERY 5 RMGKDEYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKELE 52
CONSENSUS_1 4 RYGGDEYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEVK 51
+ GG+E ++T++G++ + + ++ +++++YE+++ ++++ G+ + ++
CONSENSUS_2 27 EVGGGEWVKVLTVPGTETSFTLTGLLPGTEYEFRVRAVNAAGLGEPSE 74
d1j8ka_ 38 SPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLI 85
Subject = d1nnga_ d.38.1.1 Putative acyl-coa thioester hydrolase HI08
length=120 filtered_length=119 Neff=17.034
Smith-Waterman score = 36 Evalue = 9.83e+01
QUERY 10 EYYVQITVDGKEVHSKADNGQKYKDYEYKLTGFDKDGKEKEL 51
CONSENSUS_1 9 EYYVKITTDGKKVAEKDDNGKGYGGYEYKLKGYDKDGKEKEV 50
E+ V++ ++ + +++++++ + ++ ++++ + D+DGK ++V
CONSENSUS_2 63 EVEVEVFAE=DGKLVATGERRLVATALFTFVAVDEDGKPRPV 103
d1nnga_ 84 KIKVEVWVK=KVASEPIGERYCVTDAVFTFVAVDNNGRSRTI 124
Parameters:
E-value cutoff: 1.000e+02
Maximal number of hits to display: 400
Lambda_ungapped: 3.1760e-01
Expected value of positional scores: -5.2090e-01
Gap opening: 10
Gap extension: 1
This page was generated on August 30, 2008 04:57 PM