COMPASS
Job ID: JOB_Hh4gba
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Running PSI-BLAST on a single sequence...
PSI-BLAST is done.
Finished...PSI-BLAST output is successfully proccessed.
Generating query profile...
Searching please wait... 100% done.
COMPASS 3.0
Reference:
Ruslan I. Sadreyev and Nick V. Grishin (2003) COMPASS: a tool for comparison
of multiple protein alignments with assessment of statistical significance.
J Mol. Biol. 326(1):317-36
Job ID: JOB_Hh4gba
Input: QUERY Input processed by alignment reader (please check!)
Query = PSI-BLAST alignment produced from input
length=127; filtered_length=122; Neff=5.000
(threshold of effective gap content in columns: 0.5)
Database: SCOP40 iter5
Effective database length used: 1329419
COMPASS alignment format:
CAPITAL letters: residues at positions aligned by COMPASS (input alignment positions with gap content < 0.5)
lower-case letters: residues at positions not used by COMPASS (input alignment positions with gap content >= 0.5)
'-' : gaps retained from original alignments at positions aligned by COMPASS (positions with gap content < 0.5)
'.' : gaps retained from original alignments at positions not used by COMPASS (positions with gap content >= 0.5)
'=' : gaps introduced by COMPASS in profile-profile alignment
'~' : gaps introduced by COMPASS against positions that are not used in the construction of profile-profile alignment
(positions with gap content >= 0.5)
Clickable sequence names: links to full alignments.
For more details, see documentation.
Hits with E-value BETTER than threshold:
Profiles producing significant alignments: Score E-value
No hits better than threshold were found
Hits with E-value WORSE than threshold (may be not biologically meaningful):
d1daba_ b.80.1.7 Virulence factor P.69 pertactin 61 1.11e+00
d1fdr_1 b.43.4.2 Ferredoxin reductase (flavodoxin reductase 45 2.64e+00
d1ex2a_ c.51.4.2 Maf protein 49 3.55e+00
d1ijta_ b.42.1.1 Fibroblast growth factor 4 (FGF4) 44 7.67e+00
d1krha1 b.43.4.2 Benzoate dioxygenase reductase 42 7.75e+00
d1h5wa_ e.27.1.1 Upper collar protein gp10 (connector prote 46 9.75e+00
d1h7ca_ a.7.5.1 Tubulin chaperone cofactor A 42 1.01e+01
d1ht6a1 b.71.1.1 Plant alpha-amylase 39 1.07e+01
d1ozha2 c.36.1.5 Catabolic acetolactate synthase 43 1.14e+01
d1q6za2 c.36.1.5 Benzoylformate decarboxylase 43 1.17e+01
d1guxa_ a.74.1.3 Retinoblastoma tumor suppressor domains 44 1.24e+01
d1d8ba_ a.60.8.1 HRDC domain from RecQ helicase 41 1.25e+01
d1mkfa_ b.116.1.1 Viral chemokine binding protein m3 46 1.39e+01
d1js3a_ c.67.1.6 DOPA decarboxylase 47 1.91e+01
d1s16a1 d.14.1.3 Topoisomerase IV subunit B 40 2.09e+01
d1ei1a1 d.14.1.3 DNA gyrase B 40 2.15e+01
d1u2ca2 d.272.1.1 Dystroglycan, domain 2 40 2.34e+01
d1qexa_ b.32.1.1 gp9 43 2.35e+01
d1h0ba_ b.29.1.11 Family 12 endo-1,4-beta-glucanase (cellul 43 2.41e+01
d1upaa2 c.36.1.5 Carboxyethylarginine synthase 41 2.50e+01
d1jmsa4 d.218.1.2 Terminal deoxynucleotidyl transferase 43 2.54e+01
d1dmla1 d.131.1.2 UL42 40 2.59e+01
d1t9ba2 c.36.1.5 Acetohydroxyacid synthase catalytic subuni 40 2.85e+01
d1tib__ c.69.1.17 Triacylglycerol lipase 45 3.02e+01
d2nlra_ b.29.1.11 Family 12 endo-1,4-beta-glucanase (cellul 42 3.17e+01
d1pwaa_ b.42.1.1 Fibroblast growth factor-19 (FGF19) 40 3.37e+01
d1fvia1 b.40.4.6 ATP-dependent DNA ligase 39 3.45e+01
d1k0ra1 b.40.4.5 S1 domain of NusA 38 3.48e+01
d1nbwa3 c.55.1.6 ATPase domain of the glycerol dehydratase 41 3.60e+01
d1pkha_ b.85.4.1 Bifunctional dCTP deaminase/dUTPase 41 3.73e+01
d2adr_2 g.37.1.1 ADR1 33 3.97e+01
d1pvga1 d.14.1.3 DNA topoisomerase II 38 4.07e+01
d1up4a2 d.162.1.2 6-phospho-beta-glucosidase 42 4.12e+01
d1t43a_ c.66.1.30 N5-glutamine methyltransferase, HemK 43 4.22e+01
d1qqqa_ d.117.1.1 Thymidylate synthase 42 4.26e+01
d1ozha3 c.36.1.9 Catabolic acetolactate synthase 40 4.51e+01
d1q1ua_ b.42.1.1 Fibrobast growth factor homologous factor 39 4.83e+01
d1k2fa_ b.8.1.2 SIAH, seven in absentia homolog 40 4.95e+01
d1rcqa1 b.49.2.2 Alanine racemase 39 5.03e+01
d1rg8a_ b.42.1.1 Acidic FGF (FGF1) 39 5.18e+01
d1ptma_ c.77.1.3 4-hydroxythreonine-4-phosphate dehydrogena 42 5.27e+01
d1u0ka1 d.21.1.2 Hypothetical protein PA4716 39 5.79e+01
d1j0aa_ c.79.1.1 1-aminocyclopropane-1-carboxylate deaminas 41 6.14e+01
d1t9ba3 c.36.1.9 Acetohydroxyacid synthase catalytic subuni 40 6.20e+01
d1prtd_ b.40.2.1 Pertussis toxin S4 subunit 38 6.25e+01
d1ejfa_ b.15.1.2 Co-chaperone p23 38 6.52e+01
d1n13.1 d.155.1.2 Arginine decarboxylase 38 6.54e+01
d1bw3__ b.52.1.2 Barwin 37 6.64e+01
d1pv1a_ c.69.1.34 Hypothetical esterase YJL068C 42 6.70e+01
d1lla_2 a.86.1.1 Arthropod hemocyanin 41 6.81e+01
d1q90m_ f.23.25.1 PetM subunit of the cytochrome b6f comple 33 6.89e+01
d1cqxa2 b.43.4.2 Flavohemoglobin, central domain 37 7.02e+01
d1uwya1 b.3.2.1 Carboxypeptidase M C-terminal domain 37 7.60e+01
d1vdka_ a.127.1.1 Fumarase 41 7.65e+01
d1enwa_ a.5.4.1 Elongation factor TFIIS domain 2 37 7.96e+01
d1ri9a_ b.34.2.1 Fyn-binding protein (T-cell adapter protei 35 8.08e+01
d1a8p_1 b.43.4.2 Ferredoxin reductase (flavodoxin reductase 36 8.13e+01
d1f0xa1 d.58.32.2 D-lactate dehydrogenase 39 8.42e+01
d1y6ha_ d.167.1.1 Peptide deformylase 39 8.45e+01
d1ihua2 c.37.1.10 Arsenite-translocating ATPase ArsA 40 8.67e+01
d1mswd_ e.8.1.3 T7 RNA polymerase 42 8.68e+01
d1odha_ d.239.1.1 Mgcm1 37 8.76e+01
d1hi9a_ c.99.1.1 Zn-dependent D-aminopeptidase DppA 39 8.77e+01
d1uoya_ g.3.19.1 Bubble protein 35 8.78e+01
d1oewa_ b.50.1.2 Endothiapepsin 41 8.87e+01
d1tela2 d.58.9.1 Ribulose 1,5-bisphosphate carboxylase-oxyg 37 9.01e+01
d1nuna_ b.42.1.1 Fibroblast growth factor-10, FGF10 37 9.72e+01
d1kqfa1 b.52.2.2 Formate dehydrogenase N, alpha subunit 38 9.78e+01
d1l2ha_ b.42.1.2 Interleukin-1beta 37 9.84e+01
d1v0da_ d.4.1.7 Caspase-activated DNase, CAD (DffB, DFF40) 38 9.92e+01
Alignments:
Subject = d1daba_ b.80.1.7 Virulence factor P.69 pertactin
length=539 filtered_length=537 Neff=20.816
Smith-Waterman score = 61 Evalue = 1.11e+00
QUERY 82 IADTVATATYQGADVDWYIKAD 103
CONSENSUS_1 81 VIDAVGYAVGRGGFVDWILKAD 102
+++A +Y++ +GG+ +W+L ++
CONSENSUS_2 514 TAGAGTYTLTAGGNGNWYLTST 535
d1daba_ 514 DIGTYRYRLAANGNGQWSLVGA 535
Subject = d1fdr_1 b.43.4.2 Ferredoxin reductase (flavodoxin reductase
length=76 filtered_length=75 Neff=13.733
Smith-Waterman score = 45 Evalue = 2.64e+00
QUERY 34 DGSVSDEIKERTYDLKSKGQGRMIQVSIPASVP======LKEFDYNARVELINPIADTV 86
CONSENSUS_1 33 DGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAG======VKEFDYDAEVELVNPVIDAV 85
+ ++ +E + R+Y L S+ +++++E+++ + G + +++ +++E+ +P+ D++
CONSENSUS_2 16 RLPIDGEEVLRAYSLSSAPDDGYLEILVKRVPGGLVSNYLHDLKVGDTLEVSGPAGDFF 74
d1fdr_1 39 GLEIDGERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFF 97
Subject = d1ex2a_ c.51.4.2 Maf protein
length=185 filtered_length=184 Neff=15.424
Smith-Waterman score = 49 Evalue = 3.55e+00
QUERY 59 VSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKK 122
CONSENSUS_1 58 VVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVGVKSSQKPNPKPDK 121
+V+P++++++ ++ ++ +LV +++A+++AV+++ +++L AD +V ++++ KP+ ++++
CONSENSUS_2 26 EVVPPDIDETLLKGESPEDLVLRLALAKALAVAARLPDALVLGADTVVVLDGEILGKPKDEEEA 89
d1ex2a_ 26 SIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEA 89
Subject = d1ijta_ b.42.1.1 Fibroblast growth factor 4 (FGF4)
length=128 filtered_length=127 Neff=13.000
Smith-Waterman score = 44 Evalue = 7.67e+00
QUERY 21 FSALRREVRIQ=====NEDGSVSDEIKERTYDLKSKGQGRMIQVSIPAS 64
CONSENSUS_1 20 FLGLRREVRIE=====NEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAE 63
+L+++R++R++ ++D ++++LE YN+Y+S + +++ V + +
CONSENSUS_2 58 YLCMNRKGRLYGSKLFSDDCLFKERLLENGYNTYRSAKYRGWYVALNRR 106
d1ijta_ 58 FVAMSSKGKLYGSPFFTDECTFKEILLPNNYNAYESYKYPGMFIALGKN 106
Subject = d1krha1 b.43.4.2 Benzoate dioxygenase reductase
length=71 filtered_length=71 Neff=13.845
Smith-Waterman score = 42 Evalue = 7.75e+00
QUERY 34 DGSVSDEIKERTYDLKSKGQGRMIQVSIPASVP=======LKEFDYNARVELINPIADT 85
CONSENSUS_1 33 DGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAG=======VKEFDYDAEVELVNPVIDA 84
D ++++E L R+Y L S+ +++++++++ + G +E++ ++++E+ +P+ D+
CONSENSUS_2 12 DLRLPGEGLRRSYSLSSAPGDGRLRISVKRVPGGLVSNYLHDELKVGDTLEVSGPAGDF 70
d1krha1 41 NVTLPGTTETRSYSFSSQPGNRLTGFVVRNVPQGKMSEYLSVQAKAGDKMSFTGPFGSF 99
Subject = d1h5wa_ e.27.1.1 Upper collar protein gp10 (connector prote
length=268 filtered_length=257 Neff=3.167
Smith-Waterman score = 46 Evalue = 9.75e+00
QUERY 14 TTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVS 60
CONSENSUS_1 13 KTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVV 59
+TF +N L+L+++ R+ ++++ ++ ++E + N+Y ++ + +E++
CONSENSUS_2 206 LTFLGINNLNLDKKERLVDSEADSNNGFIEANGNIYLKGRREACELI 252
d1h5wa_ 206 MTFLGIKNANLEKKERMVTDEVSSNDEQIESSGTVFLKSREEACEKI 252
Subject = d1h7ca_ a.7.5.1 Tubulin chaperone cofactor A
length=103 filtered_length=98 Neff=11.235
Smith-Waterman score = 42 Evalue = 1.01e+01
QUERY 25 RREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPAS 64
CONSENSUS_1 24 RREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAE 63
+ E+++++E+ + ++++ + +Y+L+++++++ + +++++
CONSENSUS_2 24 KEEDEKQRERIEAKNGLESYAYSLKNTLEDEKLGGKLSED 63
d1h7ca_ 24 EKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPD 63
Subject = d1ht6a1 b.71.1.1 Plant alpha-amylase
length=57 filtered_length=57 Neff=6.246
Smith-Waterman score = 39 Evalue = 1.07e+01
QUERY 36 SVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEF 70
CONSENSUS_1 35 NVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEF 69
+ + ++L+ + +LY+++ ++ ++V+I +++ V ++
CONSENSUS_2 4 RSELKILAADGDLYVAIIDGKVIVKIGPRYDVGNL 38
d1ht6a1 4 TSALKILMHEGDAYVAEIDGKVVVKIGSRYDVGAV 38
Subject = d1ozha2 c.36.1.5 Catabolic acetolactate synthase
length=143 filtered_length=142 Neff=10.549
Smith-Waterman score = 43 Evalue = 1.14e+01
QUERY 33 EDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYN 73
CONSENSUS_1 32 EDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYD 72
+D + E++++++++++S++ + + + +P ++ ++E+++D
CONSENSUS_2 95 RDAEDLPEIIREAFRIATSGRPGPVLIDLPKDVLLAEVEFD 135
d1ozha2 133 TAPDALAEVVSNAFRAAEQGRPGSAFVSLPQDVVDGPVSGK 173
Subject = d1q6za2 c.36.1.5 Benzoylformate decarboxylase
length=145 filtered_length=145 Neff=10.393
Smith-Waterman score = 43 Evalue = 1.17e+01
QUERY 33 EDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPI 82
CONSENSUS_1 32 EDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPV 81
+D++ E++++++++++S+ + + + +P ++ ++E+D++ ++ P+
CONSENSUS_2 94 RDAEDLPEIIREAFHIATSGRPGPVLIDLPKDVLLAEVDFEPPPPVDLPL 143
d1q6za2 129 ASAAEVPHAMSRAIHMASMAPQGPVYLSVPYDDWDKDADPQSHHLFDRHV 178
Subject = d1guxa_ a.74.1.3 Retinoblastoma tumor suppressor domains
length=198 filtered_length=196 Neff=9.087
Smith-Waterman score = 44 Evalue = 1.24e+01
QUERY 6 NGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSK~GQGRMIQVSIPASVPLKEFDYNARVELINPIADTVAT 88
CONSENSUS_1 5 NGIVLDLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSS~VQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGY 87
+ I+ +K+++++N+++L + ++ EV+ +TY+L + + ++ +++P + V +++ + ++++ +I+A+++
CONSENSUS_2 79 ESILKAELKRLSVNNLSALLNNDIFHRSLLACCLEVVLATYKLVTN.NDDGGTDLTFPWILEVFGLHAFDFYKVIELFIRAEDG 162
d1guxa_ 79 ESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSqNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGN 162
Subject = d1d8ba_ a.60.8.1 HRDC domain from RecQ helicase
length=81 filtered_length=78 Neff=1.603
Smith-Waterman score = 41 Evalue = 1.25e+01
QUERY 9 VLDKDTTFGELKFSALRREVRIQNEDGSVSDE=IKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARV 76
CONSENSUS_1 8 VLDLEKTFGTLNFLGLRREVRIENEDGNVTDE=VLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEV 75
+ DL++++ L+ L+L++ R++ GN++D +L+R + ++ I ++ ++ + F+Y++++
CONSENSUS_2 2 LNDLRSAYDRLRNLALNWGNRMVPPVGNFMDDNILRRLAAILPANDEAFIGLGGNNDKDRRRFKYFKDI 70
d1d8ba_ 2 LNNLRMTYERLRELSLNLGNRMVPPVGNFMPDSILKKMAAILPMNDSAFATLGTVEDKYRRRFKYFKAT 70
Subject = d1mkfa_ b.116.1.1 Viral chemokine binding protein m3
length=371 filtered_length=335 Neff=2.537
Smith-Waterman score = 46 Evalue = 1.39e+01
QUERY 47 DLKSKGQGRMIQVSIPASVPLKEF~~~~DYNARVELINPIADTVATATYQGADVDWY 99
CONSENSUS_1 46 NLYSSVQGDDIEVVIPAEAGVKEF~~~~DYDAEVELVNPVIDAVGYAVGRGGFVDWI 98
++ ++ GD I V + AEAG ++ ++ A ++LV ++ + ++ + ++D++
CONSENSUS_2 84 TVGGAPVGDLIRVLVLAEAGRPWK....RFWANLALVTYLNVFGLTDFNVVFRTDFS 140
d1mkfa_ 84 SVGGTPVNDLVRVLVVAESNTPEEtpeeEFYAYVELQTELYTFGLSDDNVVFTSDYM 140
Subject = d1js3a_ c.67.1.6 DOPA decarboxylase
length=476 filtered_length=475 Neff=15.034
Smith-Waterman score = 47 Evalue = 1.91e+01
QUERY 44 RTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWY 99
CONSENSUS_1 43 RTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWI 98
R+ +++S+V+ ++++ ++P+E++++ +++A +E ++ +I ++++ + F +++
CONSENSUS_2 25 RDRPVLSGVEPGELRALLPLELPEEGEPLEAVLEDLEDLILPGSVHWQHPRFFAYL 80
d1js3a_ 25 EGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF 80
Subject = d1s16a1 d.14.1.3 Topoisomerase IV subunit B
length=124 filtered_length=122 Neff=6.230
Smith-Waterman score = 40 Evalue = 2.09e+01
QUERY 38 SDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIK 101
CONSENSUS_1 37 TDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILK 100
++ +L + ++L + + +++VI +++ + F + +LV+ +++ + + + ++D++L+
CONSENSUS_2 38 KEGLLKKKVALSGDDAREGLTAVISVKVPDPKFSGQTKDKLVSSEVKGAVESLVGEKLADFLLE 101
d1s16a1 81 YRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQ 144
Subject = d1ei1a1 d.14.1.3 DNA gyrase B
length=124 filtered_length=124 Neff=5.903
Smith-Waterman score = 40 Evalue = 2.15e+01
QUERY 35 GSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIK 101
CONSENSUS_1 34 GNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILK 100
++ ++ +++ ++L + + +++VI +++ + F + +LV+ +++ + ++ + ++D++L+
CONSENSUS_2 29 IDKEGLLKKAKVALTGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKGAVESLVGEKLADFLLE 95
d1ei1a1 77 MDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLE 143
Subject = d1u2ca2 d.272.1.1 Dystroglycan, domain 2
length=125 filtered_length=122 Neff=3.582
Smith-Waterman score = 40 Evalue = 2.34e+01
QUERY 50 SKGQGRMIQVSIPASVPLKEFDYNARVELINPIADT 85
CONSENSUS_1 49 SSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDA 84
+ +++++++I +A+++ + + ++V+L+N + ++
CONSENSUS_2 2 CGPEEPVTVLTIILDADLTKLTPKQRVNLLNNLRKF 37
d1u2ca2 2 CAADEPVTVLTVILDADLTKMTPKQRIDLLNRMQSF 37
Subject = d1qexa_ b.32.1.1 gp9
length=288 filtered_length=282 Neff=5.887
Smith-Waterman score = 43 Evalue = 2.35e+01
QUERY 16 FGELKFSALRREVRIQNEDGSVSD==EIKERTYDLKSKGQGRMIQVSIP~ASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTK 109
CONSENSUS_1 15 FGTLNFLGLRREVRIENEDGNVTD==EVLERTYNLYSSVQGDDIEVVIP~AEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVG 108
FG ++++ + +V+ EN +G+V+ E+L + N+ ++V + V+ ++ E+ Y+ + +++N +++A+ +++ GG++ + +KA D +++G
CONSENSUS_2 192 FGGTEYNAAKLLVYAENANGTVFKSAELLLLIDNIANKVYSTEYAVLKV.NDNDDDEL=YEIDFRIGNDYVYAEVKSL==GGNIRLAIKAIDTIKIG 285
d1qexa_ 192 FHRTEYNMAKLLVTCQSVDGRKIKTAEINILVDTVNSEVISSEYAVMRVgNETEEDEI=ANIAFSIKENYVTATISSS==TVGMRAAVKVIATQKIG 285
Subject = d1h0ba_ b.29.1.11 Family 12 endo-1,4-beta-glucanase (cellul
length=227 filtered_length=222 Neff=11.973
Smith-Waterman score = 43 Evalue = 2.41e+01
QUERY 38 SDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYN 73
CONSENSUS_1 37 TDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYD 72
T ++ ++T++LY+ G++++++++A+ ++++F+ D
CONSENSUS_2 143 TVTLGGTTWDLYKGPNGWTTVFSFVATSTTGSFSGD 178
d1h0ba_ 143 TVELAGATWEVWYADWDWNYIAYRRTTPTTSVSELD 178
Subject = d1upaa2 c.36.1.5 Carboxyethylarginine synthase
length=150 filtered_length=150 Neff=10.520
Smith-Waterman score = 41 Evalue = 2.50e+01
QUERY 33 EDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATAT 90
CONSENSUS_1 32 EDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAV 89
+D + E+++++++++ S+ + + + +P ++ ++E+++D + + ++ + A+
CONSENSUS_2 93 RDAEDLPEIIREAFYIATSGRPGPVLIDLPKDVLLAEVEFDPLLPEEVALPGYKPTAI 150
d1upaa2 129 QRPHEITDLVDSAVNAAMTEPVGPSFISLPVDLLGSSEGIDTTVPNPPANTPAKPVGV 186
Subject = d1jmsa4 d.218.1.2 Terminal deoxynucleotidyl transferase
length=208 filtered_length=207 Neff=13.749
Smith-Waterman score = 43 Evalue = 2.54e+01
QUERY 13 DTTFGELKFSALRREVRIQNEDG===SVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELI==NPIADTVATATYQGADVDWYIKADDIVLTKDSS 112
CONSENSUS_1 12 EKTFGTLNFLGLRREVRIENEDG===NVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELV==NPVIDAVGYAVGRGGFVDWILKADDIVLVGVKS 111
++T G++ +L + + ++E+G ++ +++L++ + +++ ++ +E ++ +V+++D ++++ ++ P+ + ++ ++ ++ + +++ + D+++V ++
CONSENSUS_2 36 KETSGDIDILITHPDAEEVAEAGLLLKLVARLLKKGLLKHTLLLSSTLEKRKGPARAVDALDHLEKCFGILRLPDGKVLAGKGSKASGKLRKGRRVDLRVVPPEE 140
d1jmsa4 36 KMTGHDVDFLITSPEATEDEEQQLLHKVTDFWKQQGLLLYCDILESTFEKFKQPSRKVDALDHFQKCFLILKLDHGRVHSEKSGQQEGKGWKAIRVDLVMCPYDR 140
Subject = d1dmla1 d.131.1.2 UL42
length=141 filtered_length=138 Neff=5.036
Smith-Waterman score = 40 Evalue = 2.59e+01
QUERY 48 LKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWY 99
CONSENSUS_1 47 LYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWI 98
+++SV G+++ V I++++ +++ E +P + + ++ +GR+G +D +
CONSENSUS_2 40 IHCSVFGEQVYVPIDCSL=======FSRYEWRGPPAVFLALVDGRRGLLDAF 84
d1dmla1 40 IHNTIFGEQVFLPLEHSQ=======FSRYRWRGPTAAFLSLVDQKRSLLSVF 84
Subject = d1t9ba2 c.36.1.5 Acetohydroxyacid synthase catalytic subuni
length=136 filtered_length=135 Neff=9.719
Smith-Waterman score = 40 Evalue = 2.85e+01
QUERY 33 EDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYN 73
CONSENSUS_1 32 EDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYD 72
+D++ E++++++++++S+ + + + +P ++ ++E+D+D
CONSENSUS_2 94 RDAEDLPEIIREAFYIATSGRPGPVLIDLPKDVLLAEVDFD 134
d1t9ba2 133 KSVEELPLRINEAFEIATSGRPGPVLVDLPKDVTAAILRNP 173
Subject = d1tib__ c.69.1.17 Triacylglycerol lipase
length=269 filtered_length=265 Neff=18.777
Smith-Waterman score = 45 Evalue = 3.02e+01
QUERY 29 RIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIV 106
CONSENSUS_1 28 RIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIV 105
+++ + +++++ + ++ ++ + +++I V++ +++K++ D + LV+ + +G++V RG ++ D+++
CONSENSUS_2 48 DVILVKAFEDNKDGGTQGYVAVDDDRKAIVVAFRGTESLKDWLTDLDFDLVPLDPLGLGGKVHRGFLRAYKSLLDQLL 125
d1tib__ 48 DATFLYSFEDSGVGDVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLR 125
Subject = d2nlra_ b.29.1.11 Family 12 endo-1,4-beta-glucanase (cellul
length=222 filtered_length=219 Neff=11.539
Smith-Waterman score = 42 Evalue = 3.17e+01
QUERY 38 SDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYN 73
CONSENSUS_1 37 TDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYD 72
T ++ ++T++LY+ G++ ++++ A+ ++++F+ D
CONSENSUS_2 140 TVTLGGTTWDLYKGPNGGWKVYSFVAPGPITSFSGD 175
d2nlra_ 140 TASVGGRTWEVWSGGNGSNDVLSFVAPSAISGWSFD 175
Subject = d1pwaa_ b.42.1.1 Fibroblast growth factor-19 (FGF19)
length=136 filtered_length=133 Neff=12.895
Smith-Waterman score = 40 Evalue = 3.37e+01
QUERY 21 FSALRREVRIQ======NEDGSVSDEIKERTYDLKSKGQGRM 56
CONSENSUS_1 20 FLGLRREVRIE======NEDGNVTDEVLERTYNLYSSVQGDD 55
+L+++R++R++ +ED ++++LE YN+Y+S++ ++
CONSENSUS_2 60 YLCMNRKGRLYGSKSFNSEDCLFRERLLENGYNTYASAKYGW 101
d1pwaa_ 60 YLCMGADGKMQGLLQYSEEDCAFEEEIRPDGYNVYRSEKHRL 101
Subject = d1fvia1 b.40.4.6 ATP-dependent DNA ligase
length=104 filtered_length=103 Neff=12.476
Smith-Waterman score = 39 Evalue = 3.45e+01
QUERY 17 GELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQV 59
CONSENSUS_1 16 GTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEV 58
G+L L L++++++ + +TDE +++ ++ + +++G+++EV
CONSENSUS_2 42 GLLGALLLETDGGRFKVGTGFTDEERKELWAELPPLIGKVVEV 84
d1fvia1 42 DVMGSIEVDYDGVVFSIGTGFDADQRRDFWQNKESYIGKMVKF 84
Subject = d1k0ra1 b.40.4.5 S1 domain of NusA
length=76 filtered_length=75 Neff=12.613
Smith-Waterman score = 38 Evalue = 3.48e+01
QUERY 7 GIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVS 60
CONSENSUS_1 6 GIVLDLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVV 59
++++DL + ++++ + L R+ I +E+ +V+D V+ ++++ + G +I+++
CONSENSUS_2 23 IVIVDLGREIDGVEAV=LPRKEQIPGENFRVGDRVRAYVLEVRRESRGPQIILS 75
d1k0ra1 23 LVVVRIGTETKASEGV=IPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLITLS 75
Subject = d1nbwa3 c.55.1.6 ATPase domain of the glycerol dehydratase
length=202 filtered_length=200 Neff=3.440
Smith-Waterman score = 41 Evalue = 3.60e+01
QUERY 48 LKSKGQGRMIQVSIPASVPLKEFDYNARVE 77
CONSENSUS_1 47 LYSSVQGDDIEVVIPAEAGVKEFDYDAEVE 76
+ +++GD+++++I E+G+ ++ ++++
CONSENSUS_2 30 VHLAGAGDMVTLLIARELGLEDLYLAEDIK 59
d1nbwa3 30 VHLAGAGNMVSLLIKTELGLEDLSLAEAIK 59
Subject = d1pkha_ b.85.4.1 Bifunctional dCTP deaminase/dUTPase
length=161 filtered_length=160 Neff=14.812
Smith-Waterman score = 41 Evalue = 3.73e+01
QUERY 39 DEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVL 107
CONSENSUS_1 38 DEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVL 106
+++ + +++L G+++ V+ + ++ K+ +++ +++++N+++ + +++ + + ++++ A+DIVL
CONSENSUS_2 4 EQIQPASVDLR===LGNEFRVFRNSVLPMKNPEVKILLKRLNEEAIDPKRGTEGEAGGYDLAAAEDIVL 69
d1pkha_ 25 DFVGPCSYDVT===LGDEFIIYDDEVYDLSKELNYKRIKIKNSILVCPLNYNLTEEKINYFKEKYNVDY 90
Subject = d2adr_2 g.37.1.1 ADR1
length=31 filtered_length=31 Neff=3.323
Smith-Waterman score = 33 Evalue = 3.97e+01
QUERY 28 VRIQNEDGSVSDEIKERTYDLKSKGQGR 55
CONSENSUS_1 27 VRIENEDGNVTDEVLERTYNLYSSVQGD 54
+ I ++ +++D +L++ ++L+++ GD
CONSENSUS_2 4 CGICGRCFARRDLLLRHAQKLHGGNCGD 31
d2adr_2 4 CGLCNRAFTRRDLLIRHAQKIHSGNLGE 31
Subject = d1pvga1 d.14.1.3 DNA topoisomerase II
length=117 filtered_length=115 Neff=5.357
Smith-Waterman score = 38 Evalue = 4.07e+01
QUERY 57 IQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIK 101
CONSENSUS_1 56 IEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILK 100
+++VI +++ + F + +LV+ ++++ + + + ++D++L+
CONSENSUS_2 60 LTAVISVKVPDPKFSSQTKDKLVSSEVKGAVESLLGEKLADFLLE 104
d1pvga1 104 MFIFINCLIENPAFTSQTKEQLTTRVKDFGSRCEIPLEYINKIMK 148
Subject = d1up4a2 d.162.1.2 6-phospho-beta-glucosidase
length=253 filtered_length=250 Neff=13.324
Smith-Waterman score = 42 Evalue = 4.12e+01
QUERY 8 IVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVA 87
CONSENSUS_1 7 IVLDLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVG 86
+V++LEK++ +L L++ ++E+++G ++ E+ + + ++++++V++P + +++++ DA VE V+ ++DA G
CONSENSUS_2 102 EVKELEKELFELYRDPLEKPKELEKRGGALYGEYAVDLIEALLNDKRSRLVVNVPNNGAIPNLPDDAVVE=VPCLVDANG 180
d1up4a2 102 EVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLE=IPCYVRSGR 180
Subject = d1t43a_ c.66.1.30 N5-glutamine methyltransferase, HemK
length=258 filtered_length=257 Neff=16.739
Smith-Waterman score = 43 Evalue = 4.22e+01
QUERY 39 DEIKERTYDLKSKGQGRMIQVSI==PASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTK 109
CONSENSUS_1 38 DEVLERTYNLYSSVQGDDIEVVI==PAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVG 108
D V+ + +L+++++G+++ +++ P+ +++++++ ++++ +P++ ++G ++G +I +A ++++ G
CONSENSUS_2 142 DRVEFLQGDLFEPLPGGKFDLIVSNPPYIPADDLALLPPEVRHEPRLALFGGEDGLDIIRRIIAEAPRLLKPG 214
d1t43a_ 158 KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSG 230
Subject = d1qqqa_ d.117.1.1 Thymidylate synthase
length=264 filtered_length=263 Neff=13.144
Smith-Waterman score = 42 Evalue = 4.26e+01
QUERY 17 GELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVL 107
CONSENSUS_1 16 GTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVL 106
G+L+++ ++ ++ ++DG++ D+++ +L+ + ++I++++ + + +++++L+ ++ + Y ++++ ++ +++++ D+ L
CONSENSUS_2 88 GDLGPVYGKQWRHFGAPDGGGIDQLAKVIDKLKNNPDSRRIILSA======WNPADLDKMALPPCHLLFQFYVRDGKLSLQLYQRSADVFL 172
d1qqqa_ 88 GDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSA======WNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFL 172
Subject = d1ozha3 c.36.1.9 Catabolic acetolactate synthase
length=172 filtered_length=172 Neff=11.506
Smith-Waterman score = 40 Evalue = 4.51e+01
QUERY 11 DKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPL 67
CONSENSUS_1 10 DLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGV 66
+ + ++G+ +F++L + +I+ ++ + ++E++E ++++S +++V++++E++V
CONSENSUS_2 105 YSGTDLGNPDFVKLAEAFGIKGLRVEKPEELEEALKEALASDGPVLLDVLVDPEENV 161
d1ozha3 125 LSGVEFGPMDFKAYAESFGAKGFAVESAEALEPTLRAAMDVDGPAVVAIPVDYRDNP 181
Subject = d1q1ua_ b.42.1.1 Fibrobast growth factor homologous factor
length=138 filtered_length=135 Neff=12.837
Smith-Waterman score = 39 Evalue = 4.83e+01
QUERY 21 FSALRREVRIQ=====NEDGSVSDEIKERTYDLKSKGQ 53
CONSENSUS_1 20 FLGLRREVRIE=====NEDGNVTDEVLERTYNLYSSVQ 52
+L+++R++R++ ++D ++++LE YN+Y+S +
CONSENSUS_2 59 YLCMNRKGRLYGSKVFSDDCLFRERLLENGYNTYASAK 96
d1q1ua_ 59 YVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTL 96
Subject = d1k2fa_ b.8.1.2 SIAH, seven in absentia homolog
length=190 filtered_length=186 Neff=11.425
Smith-Waterman score = 40 Evalue = 4.95e+01
QUERY 6 NGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDS 111
CONSENSUS_1 5 NGIVLDLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVGVK 110
++ + D+ ++ ++N++G V ++++ G + VLE +++ + + + +I+++ ++++F Y+ E++ + +++ +++ + + V+ I+ +D ++ +
CONSENSUS_2 65 TLQGFDIVFLATDINLVGAADWVLVLSCFGKLFLLVLEKFELGEGHGVYFTVVCIIGSAEEAGNFSYRLELRGNGRKLTWESTPRSIREGVAKIIPSGDCLVIPSN 170
d1k2fa_ 65 TLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTS 170
Subject = d1rcqa1 b.49.2.2 Alanine racemase
length=132 filtered_length=130 Neff=14.277
Smith-Waterman score = 39 Evalue = 5.03e+01
QUERY 41 IKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYI 100
CONSENSUS_1 40 VLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWIL 99
+ ++++ + +V D++ V ++ ++++++ ++EV L+++ I+++ A++ G+ +L
CONSENSUS_2 63 INGKRVPIVGRVSMDLLMVDLT===DLPDVKVGDEVVLFGEDITVDELAEAAGTIGYELL 119
d1rcqa1 63 IDGKPGRLVGRVSMDMLTVDLT===DHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLL 119
Subject = d1rg8a_ b.42.1.1 Acidic FGF (FGF1)
length=141 filtered_length=138 Neff=13.341
Smith-Waterman score = 39 Evalue = 5.18e+01
QUERY 21 FSALRREVRIQ=====NEDGSVSDEIKERTYDLKSKGQ 53
CONSENSUS_1 20 FLGLRREVRIE=====NEDGNVTDEVLERTYNLYSSVQ 52
+L+++R++R++ N+D +++++LE YN+Y+S +
CONSENSUS_2 68 YLCMNRKGRLYGSKVFNDDCLFRERLLENGYNTYASRK 105
d1rg8a_ 68 YLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKK 105
Subject = d1ptma_ c.77.1.3 4-hydroxythreonine-4-phosphate dehydrogena
length=329 filtered_length=327 Neff=13.578
Smith-Waterman score = 42 Evalue = 5.27e+01
QUERY 39 DEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKK 122
CONSENSUS_1 38 DEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVGVKSSQKPNPKPDK 121
+++++R+ L ++++ +++++ PAE+ ++++ + +++L +PV+ +++A+ ++ ++++ +A +++L+G+ ++ P +++
CONSENSUS_2 41 ALLARRAALLGLPLALRPVSADAPAEPAAAGVLDVLPLPLAAPVTPGKLDAAAGAAALESLERAVELALAGEVDALVTAPINKE 124
d1ptma_ 41 TLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKG 124
Subject = d1u0ka1 d.21.1.2 Hypothetical protein PA4716
length=129 filtered_length=127 Neff=16.528
Smith-Waterman score = 39 Evalue = 5.79e+01
QUERY 17 GELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPA 63
CONSENSUS_1 16 GTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPA 62
GTL ++ + +E ++++ +G+ T E+L+++ +L+ +++G++I+V++PA
CONSENSUS_2 75 GTLGAAHVLLELGLLKGPGRLTLETLAGLVELEVERDGGGILVDLPA 121
d1u0ka1 75 PLLGAAALLHHLRGGDNEQHWTLHLASKSVALRSVRAGSGFYAEMDQ 121
Subject = d1j0aa_ c.79.1.1 1-aminocyclopropane-1-carboxylate deaminas
length=294 filtered_length=293 Neff=12.795
Smith-Waterman score = 41 Evalue = 6.14e+01
QUERY 48 LKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKKEPTQ 126
CONSENSUS_1 47 LYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVGVKSSQKPNPKPDKEQGQ 125
L ++++G +++V+P+++++ + +++++ +++ + +V G ++I KA+ ++ +++++ + PN+ ++ + +
CONSENSUS_2 58 LVAAAKGYKLIIVMPETMSLERK==VDLLRALGAEVVLTPASVPADGMKGAIAKAEELAEEIPNAFIIPNQFDNPANPA 134
d1j0aa_ 89 LAAKKLGLDAILVLRGKEELKGN==YLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTL 165
Subject = d1t9ba3 c.36.1.9 Acetohydroxyacid synthase catalytic subuni
length=216 filtered_length=212 Neff=12.689
Smith-Waterman score = 40 Evalue = 6.20e+01
QUERY 15 TFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPL 67
CONSENSUS_1 14 TFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGV 66
++G+ +F++L + +I+ ++ + ++E+++ ++++S +++V++++E++V
CONSENSUS_2 128 DLGNPDFVKLAEAFGIKGLRVEKPEELEAALKEALASDGPVLLDVLVDPEENV 180
d1t9ba3 139 HQLNPDFIKLAEAMGLKGLRVKKQEELDAKLKEFVSTKGPVLLEVEVDKKVPV 191
Subject = d1prtd_ b.40.2.1 Pertussis toxin S4 subunit
length=110 filtered_length=110 Neff=1.000
Smith-Waterman score = 38 Evalue = 6.25e+01
QUERY 35 GSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARV 76
CONSENSUS_1 34 GNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEV 75
++++ +V++ + + Y ++++ I+A++G+ +DA V
CONSENSUS_2 7 VKTNLVVTSVALKPYEVTPTRLLVCGIAAKLGAAASSPDAHV 48
d1prtd_ 7 VKTNMVVTSVAMKPYEVTPTRMLVCGIAAKLGAAASSPDAHV 48
Subject = d1ejfa_ b.15.1.2 Co-chaperone p23
length=110 filtered_length=105 Neff=16.105
Smith-Waterman score = 38 Evalue = 6.52e+01
QUERY 47 DLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIK 101
CONSENSUS_1 46 NLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILK 100
+++++++ ++++V++ ++G+K+ +Y+ ++EL +++++ ++ + +G+ + ++L+
CONSENSUS_2 26 DVKVEITENSLSVSV==KGGAKGKEYLLDLELFGEIDPEESKWKVEGRKIEITLR 78
d1ejfa_ 26 DVNVNFEKSKLTFSC==LGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLR 78
Subject = d1n13.1 d.155.1.2 Arginine decarboxylase
length=159 filtered_length=152 Neff=8.888
Smith-Waterman score = 38 Evalue = 6.54e+01
QUERY 35 GSVSDEIKERTYDLKSKGQGRMIQV====SIPASV===PLKEFDYNARVELINPIADTVATATYQGADVDWYIKADD 104
CONSENSUS_1 34 GNVTDEVLERTYNLYSSVQGDDIEV====VIPAEA===GVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADD 103
G ++++ + + L+ + G+ + V ++P+++ +++E+++ + +++V +I++ +++ ++ +++ + +D+
CONSENSUS_2 19 GEGKTKLAAFDLALRDAGIGNFNLVTVSSILPPNCEIVTLPELPPGEILFCVMARISSNEPGRLISAGIGVAIPKDE 95
g1n13.1 19 SEGETPLNAFDGALLNAGIGNVNLIRISXIMPPEAEIVPLPKLPMGALVPTAYGYIISDVPGETISAAISVAIPKDK 95
Subject = d1bw3__ b.52.1.2 Barwin
length=125 filtered_length=110 Neff=10.600
Smith-Waterman score = 37 Evalue = 6.64e+01
QUERY 44 RTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYI 100
CONSENSUS_1 43 RTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWIL 99
+ +++ + G+ ++V+I + + ++D + + + + +++ G + + ++W +
CONSENSUS_2 65 KCIRVTNPAGGKSVTVRIVDRCPGCGLDLSVP=AAFAALATDGGGLDAGRIPISWEF 120
d1bw3__ 65 KCLRVTNPATGAQITARIVDQCANGGLDLDWD=TVFTKIDTNGIGYQQGHLNVNYQF 120
Subject = d1pv1a_ c.69.1.34 Hypothetical esterase YJL068C
length=299 filtered_length=297 Neff=17.209
Smith-Waterman score = 42 Evalue = 6.70e+01
QUERY 44 RTYDLKSKGQGRMIQ==VSIPASVPLKEFDYNARVELI 79
CONSENSUS_1 43 RTYNLYSSVQGDDIE==VVIPAEAGVKEFDYDAEVELV 78
++++++S++ G +++ +++P+++ ++FD ++++ ++
CONSENSUS_2 15 EVISFPSAADGLELHGWLYLPPGFDASNFDPGKKYPVL 52
d1pv1a_ 15 IKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTV 52
Subject = d1lla_2 a.86.1.1 Arthropod hemocyanin
length=270 filtered_length=268 Neff=15.097
Smith-Waterman score = 41 Evalue = 6.81e+01
QUERY 6 NGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIV 106
CONSENSUS_1 5 NGIVLDLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIV 105
+G +++L ++ L F + + + +++++D+ + ++++++ +++ ++ + ++ + ++++++ ++ +++++ +I + +++ +R+ + ++ ++A ++
CONSENSUS_2 125 EGYFPKLLSYPNGLEFPARPNNLVLRDLDNVDIEDLEDWEERIRDAIDLGYVIDANGKKIPLDD===PEGIDILGNLIEGNVDSPNRDYYGSLHNLAHVLL 222
d1lla_2 125 AGYAPHLTHVASGKYYSPRPDGLKLRDLGDIEISEMVRMRERILDSIHLGYVISEDGSHKTLDE===LHGTDILGALVESSYESVNHEYYGNLHNWGHVTM 222
Subject = d1q90m_ f.23.25.1 PetM subunit of the cytochrome b6f comple
length=34 filtered_length=34 Neff=1.000
Smith-Waterman score = 33 Evalue = 6.89e+01
QUERY 75 RVELINPIADTVATATYQGADVDWY=IKADDIV 106
CONSENSUS_1 74 EVELVNPVIDAVGYAVGRGGFVDWI=LKADDIV 105
E E+++ ++ +++ ++ +G ++++ L+++ +V
CONSENSUS_2 1 EAEFIAGTALTLVGLTLVGLAIGFVLLRVESLV 33
d1q90m_ 1 EAEFIAGTALTMVGMTLVGLAIGFVLLRVESLV 33
Subject = d1cqxa2 b.43.4.2 Flavohemoglobin, central domain
length=90 filtered_length=90 Neff=14.411
Smith-Waterman score = 37 Evalue = 7.02e+01
QUERY 34 DGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFD 71
CONSENSUS_1 33 DGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFD 70
++ ++E + R+Y L S+ +++ +++++ +A+ ++ +
CONSENSUS_2 25 PIDGGGEEVIRAYSLSSAPDDGYLRISVKRVADGEGPG 62
d1cqxa2 46 DVPALGLQQIRQYSLSDMPNGRTYRISVKREGGGPQPP 83
Subject = d1uwya1 b.3.2.1 Carboxypeptidase M C-terminal domain
length=81 filtered_length=80 Neff=17.075
Smith-Waterman score = 37 Evalue = 7.60e+01
QUERY 18 ELKFSALR=REVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVS 60
CONSENSUS_1 17 TLNFLGLR=REVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVV 59
T++++G++ +EV+++ ++G+ +++ L+ +++L +++ D+++V+
CONSENSUS_2 24 TVSAIGFKTQEVKVTVLAGLQLGGALTLDITLEEGAALDEVVVT 67
d1uwya1 50 NVTVPGHDPHITKVIIPEKSQNFSALKKDILLPFQGQLDSIPVS 93
Subject = d1vdka_ a.127.1.1 Fumarase
length=421 filtered_length=420 Neff=12.638
Smith-Waterman score = 41 Evalue = 7.65e+01
QUERY 10 LDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIV 106
CONSENSUS_1 9 LDLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIV 105
++L + +++++ ++ + ++++ D +++D++++ + ++ ++++ D++++++ ++ + VN VI ++++ + +G+ ++++++ D V
CONSENSUS_2 1 PELIRALALVKKAAALANAELGLLDAEKADAIVAACDEILAGKLDDQFPLDVFQGGSGTSTNMN=====VNEVIANRALELLGGKLGEKPVHPNDHV 92
d1vdka_ 40 LEIIRAYGMLKKAAARANLELGELPEEIAKAIIQAAEEVVQGKWDDHFPLVVFQTGSGTQTNMN=====VNEVIANRASEILGKPLGSKYAHPNDHV 131
Subject = d1enwa_ a.5.4.1 Elongation factor TFIIS domain 2
length=114 filtered_length=110 Neff=13.673
Smith-Waterman score = 37 Evalue = 7.96e+01
QUERY 6 NGIVLDKDTTFGELKFSALRREVRIQNE======DGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEF 70
CONSENSUS_1 5 NGIVLDLEKTFGTLNFLGLRREVRIENE======DGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEF 69
+ +V +++ + +++ L+L+ E +++++ D + ++ ++++ +NL+ + D + V+ E+ ++++
CONSENSUS_2 32 EALVTGSDESPEDILELALEIEEELFKLFGGGNTDKKYKNKLRSLLFNLKDPKNPDLRRRVLSGEISPERL 102
d1enwa_ 32 DVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFL 102
Subject = d1ri9a_ b.34.2.1 Fyn-binding protein (T-cell adapter protei
length=77 filtered_length=75 Neff=6.827
Smith-Waterman score = 35 Evalue = 8.08e+01
QUERY 68 KEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLT 108
CONSENSUS_1 67 KEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLV 107
K F +D E+E+++ + + ++++GG D +K +I+ V
CONSENSUS_2 9 KKFKLDGEIEVLHTAKVDCDLVSRKGGKNDLPVKPGEILEV 49
d1ri9a_ 9 KKFKYDGEIRVLYSTKVTTSITSKKWGTRDLQVKPGESLEV 49
Subject = d1a8p_1 b.43.4.2 Ferredoxin reductase (flavodoxin reductase
length=76 filtered_length=76 Neff=14.053
Smith-Waterman score = 36 Evalue = 8.13e+01
QUERY 36 SVSDEIKERTYDLKSKGQGRMIQVSIPASVP======LKEFDYNARVELINP 81
CONSENSUS_1 35 NVTDEVLERTYNLYSSVQGDDIEVVIPAEAG======VKEFDYDAEVELVNP 80
++ +E + R+Y L S+ +++++E+++ G + +++ +++E++++
CONSENSUS_2 19 PIDGEEVLRAYSLSSAPDDGELEILVKRVPGGLVSNYLHNLKVGDTLEVAAG 70
d1a8p_1 42 EVDGRPLMRAYSIASPNYEEHLEFFSIKVQNGPLTSRLQHLKEGDELMVSRK 93
Subject = d1f0xa1 d.58.32.2 D-lactate dehydrogenase
length=294 filtered_length=294 Neff=6.146
Smith-Waterman score = 39 Evalue = 8.42e+01
QUERY 49 KSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKD 110
CONSENSUS_1 48 YSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVGV 109
Y +V D++E +++ ++ ++ D D +L + D + + + G F ++++ D IV++GV
CONSENSUS_2 171 YRAVHRDEVEDILALDIALRRNDRDWFEVLPPEIDDKLVHKLYYGHFFCHVFHQDYIVKKGV 232
d1f0xa1 171 YQAVHSDEVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGV 232
Subject = d1y6ha_ d.167.1.1 Peptide deformylase
length=177 filtered_length=176 Neff=15.500
Smith-Waterman score = 39 Evalue = 8.45e+01
QUERY 55 RMIQVSIPASVPLKEFDYNARVELINPIADTVATAT 90
CONSENSUS_1 54 DDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAV 89
+++++ +++E G++E + + ++ L+NP+I+ ++ +
CONSENSUS_2 59 RLFVIDVGDEEGEPEAPPVPPLVLINPEILELSGEL 94
d1y6ha_ 59 QIVVVGSEDNERYPGTPDVPERIILNPVITPLTKDT 94
Subject = d1ihua2 c.37.1.10 Arsenite-translocating ATPase ArsA
length=262 filtered_length=261 Neff=14.716
Smith-Waterman score = 40 Evalue = 8.67e+01
QUERY 6 NGIVLDKDTTFGELKFSAL=RREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKE 69
CONSENSUS_1 5 NGIVLDLEKTFGTLNFLGL=RREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKE 68
+++++D+ ++GTL +L+L ++ + ++++++ + L + + +++ V++P ++ +++
CONSENSUS_2 118 DYLIIDCPPGGGTLRLLALPAASDSVLIPLQCEFEALEGLLQLLQDIELTGAVLVTTPEKVALLD 182
d1ihua2 135 RFVVMDTAPTGHTLLLLDATGAYHREIAKKMGEKGHFTTPMMLLQDPERTKVLLVTLPETTPVLE 199
Subject = d1mswd_ e.8.1.3 T7 RNA polymerase
length=882 filtered_length=869 Neff=13.448
Smith-Waterman score = 42 Evalue = 8.68e+01
QUERY 6 NGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADT 85
CONSENSUS_1 5 NGIVLDLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDA 84
+ + L +++G+ + ++R+E ++ E+ ++++++E++ +++++++ ++ + ++ A+ +K++ +++ ++ ++++++
CONSENSUS_2 130 GVKLTRLAVSLGRAIEDEVRIEKLLKKEKKIFKKALEELLKKRSGLLLKKAKLKLVEAKKLLKGLLELEAWKPWPKEVRL 209
d1mswd_ 130 NTTVQAVASAIGRAIEDEARFGRIRDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEADMLSKGLLGGEAWSSWHKEDSI 209
Subject = d1odha_ d.239.1.1 Mgcm1
length=158 filtered_length=156 Neff=5.551
Smith-Waterman score = 37 Evalue = 8.76e+01
QUERY 54 GRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKKE 123
CONSENSUS_1 53 GDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVGVKSSQKPNPKPDKE 122
G++I + + +++++ +++ + +N +++ + + + G V +++ D+ +++++ +P+P+++
CONSENSUS_2 78 GSRIHLRPAICDKARKKQQGKGCPNCNGPLELLPCRGHCGYPVTHFWRHDGKAIFFQAKGVHDHPRPEAK 147
d1odha_ 78 GRKIYLRPAICDKARQKQQRKSCPNCNGPLKLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPRPETK 147
Subject = d1hi9a_ c.99.1.1 Zn-dependent D-aminopeptidase DppA
length=274 filtered_length=271 Neff=9.494
Smith-Waterman score = 39 Evalue = 8.77e+01
QUERY 7 GIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNA===RVELI 79
CONSENSUS_1 6 GIVLDLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDA===EVELV 78
+I +D+E + G ++ +R +++ +++ + + +++ +++ + ++ ++++V+ ++ G ++ +++ +V+LV
CONSENSUS_2 4 YISADIEGIAGVVSWEQVRPGGPEYERARKLMTAEVNAAIEGAFAGGATEVLVN=DSHGGMRNLLPERLDPRVRLV 78
d1hi9a_ 4 YMSVDMEGISGLPDDTFVDSGKRNYERGRLIMTEEANYCIAEAFNSGCTEVLVN=DSHSKMNNLMVEKLHPEADLI 78
Subject = d1uoya_ g.3.19.1 Bubble protein
length=64 filtered_length=64 Neff=1.672
Smith-Waterman score = 35 Evalue = 8.78e+01
QUERY 17 GELKFSALRREVRIQNEDGSVSDE 40
CONSENSUS_1 16 GTLNFLGLRREVRIENEDGNVTDE 39
G+ F+G +R + +E ++G+ T++
CONSENSUS_2 23 GDRHFCGCDRFGVVECRGGRWTEI 46
d1uoya_ 23 GDRHFCGCDRTGVVECKGGKWTEV 46
Subject = d1oewa_ b.50.1.2 Endothiapepsin
length=306 filtered_length=305 Neff=16.984
Smith-Waterman score = 41 Evalue = 8.87e+01
QUERY 6 NGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKKEPTQD 127
CONSENSUS_1 5 NGIVLDLEKTFGTLNFLGLRREVRIENEDGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVGVKSSQKPNPKPDKEQGQD 126
+++ + ++++ ++++ G++ +++ +++G + ++ L S + D++ +I+A+ +D+++E+ ++ ++I+++ + +++ G +D+ L ++D++L+ ++++++ ++ +++G++
CONSENSUS_2 160 TYVPVVTSEGYWQITLDGISVGGKSLCSGGCQAILDTGTSLILLPSDVVDALLKAIGAA=====PDSSGEYGVDCSCISTLPDLTFTIGGKDFTLPPEDYILKLSDGGCGLCLLGIQPSGGG 276
d1oewa_ 184 TYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVSGA=====KSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGI 300
Subject = d1tela2 d.58.9.1 Ribulose 1,5-bisphosphate carboxylase-oxyg
length=145 filtered_length=145 Neff=3.393
Smith-Waterman score = 37 Evalue = 9.01e+01
QUERY 34 DGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDI 105
CONSENSUS_1 33 DGNVTDEVLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDI 104
+ +V +++ +++Y++ ++++G + ++++ + +F+ +L N + + G+ V+ V +++ DI
CONSENSUS_2 69 GLEVLGRLKGLSYPVEHAATGPIHACRVTIAHPHGNFGP====KLPNLLTAVCGEGVFFTPGVP=LVRLLDI 135
d1tela2 69 DYEVIEELEQLSYPVKHSETGKIHACRVTIAHPHCNFGP====KIPNLLTAVCGEGTYFTPGVP=VVKLMDI 135
Subject = d1nuna_ b.42.1.1 Fibroblast growth factor-10, FGF10
length=139 filtered_length=135 Neff=13.289
Smith-Waterman score = 37 Evalue = 9.72e+01
QUERY 20 KFSALRREVRIQ=====NEDGSVSDEIKERTYDLKSKGQ 53
CONSENSUS_1 19 NFLGLRREVRIE=====NEDGNVTDEVLERTYNLYSSVQ 52
++L+++R++R++ N+D ++++LE YN+Y+SV+
CONSENSUS_2 62 RYLCMNRKGRLYGSKVFNDDCLFRERLLENGYNTYASVK 100
d1nuna_ 62 YYLAMNKKGKLYGSKEFNNDCKLKERIEENGYNTYASFN 100
Subject = d1kqfa1 b.52.2.2 Formate dehydrogenase N, alpha subunit
length=153 filtered_length=152 Neff=15.684
Smith-Waterman score = 38 Evalue = 9.78e+01
QUERY 44 RTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDI 105
CONSENSUS_1 43 RTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDI 104
RT +++ +++++++ + P +A +++ + V++++++ +++++A+ + ++ ++++ +
CONSENSUS_2 44 RTGRVLRELAPEPFVEINPEDAAKLGIKDGDLVRVSSRRGEVLVKARVTDRIRPGVVAGPEG 105
d1kqfa1 56 KHALLNAIAQPEQFVEISETLAAAKGINNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQV 117
Subject = d1l2ha_ b.42.1.2 Interleukin-1beta
length=149 filtered_length=147 Neff=11.476
Smith-Waterman score = 37 Evalue = 9.84e+01
QUERY 41 IKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGA=DVDWYI 100
CONSENSUS_1 40 VLERTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGG=FVDWIL 99
++++++ L++++ G+ +++ + + + + + ++E ++ + D+ ++++ + + +W++
CONSENSUS_2 59 IKGGNLYLSCVKKGGKPTLQLEEVDIKDYLKKKDEKRFLFYRSDTGSTSTFESAAYPGWFI 119
d1l2ha_ 59 LKEKNLYLSCVLKDDKPTLQLESVDPKNYPKKKMEKRFVFNKIEINNKLEFESAQFPNFYI 119
Subject = d1v0da_ d.4.1.7 Caspase-activated DNase, CAD (DffB, DFF40)
length=245 filtered_length=238 Neff=4.794
Smith-Waterman score = 38 Evalue = 9.92e+01
QUERY 44 RTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTK 109
CONSENSUS_1 43 RTYNLYSSVQGDDIEVVIPAEAGVKEFDYDAEVELVNPVIDAVGYAVGRGGFVDWILKADDIVLVG 108
+++N Y++ ++++ + ++ D +E+ V+ A + AV++G +VD+ ++ ++
CONSENSUS_2 158 HSINPYGNRESRILFST=========WNLDHIIEKKRTVLPALVEAVEDGREVDVEYFYLLLFTLE 214
d1v0da_ 158 HSINPYGNRESRILFST=========WNLDHIIEKKRTVVPTLAEAIQDGREVNWEYFYSLLFTAE 214
Parameters:
E-value cutoff: 1.000e+02
Maximal number of hits to display: 500
Lambda_ungapped: 3.1760e-01
Expected value of positional scores: -5.2090e-01
Gap opening: 10
Gap extension: 1
This page was generated on August 31, 2008 11:16 PM