COMPASS
Job ID: JOB_qeRtHu
You may bookmark this page or save the address and check the result later.
Closing this page will not affect the result.
Running PSI-BLAST on a single sequence...
PSI-BLAST is done.
Finished...PSI-BLAST output is successfully proccessed.
Generating query profile...
Searching please wait... 100% done.
COMPASS 3.0
Reference:
Ruslan I. Sadreyev and Nick V. Grishin (2003) COMPASS: a tool for comparison
of multiple protein alignments with assessment of statistical significance.
J Mol. Biol. 326(1):317-36
Job ID: JOB_qeRtHu
Input: QUERY Input processed by alignment reader (please check!)
Query = PSI-BLAST alignment produced from input
length=109; filtered_length=100; Neff=8.280
(threshold of effective gap content in columns: 0.5)
Database: SCOP40 iter5
Effective database length used: 1329419
COMPASS alignment format:
CAPITAL letters: residues at positions aligned by COMPASS (input alignment positions with gap content < 0.5)
lower-case letters: residues at positions not used by COMPASS (input alignment positions with gap content >= 0.5)
'-' : gaps retained from original alignments at positions aligned by COMPASS (positions with gap content < 0.5)
'.' : gaps retained from original alignments at positions not used by COMPASS (positions with gap content >= 0.5)
'=' : gaps introduced by COMPASS in profile-profile alignment
'~' : gaps introduced by COMPASS against positions that are not used in the construction of profile-profile alignment
(positions with gap content >= 0.5)
Clickable sequence names: links to full alignments.
For more details, see documentation.
Hits with E-value BETTER than threshold:
Profiles producing significant alignments: Score E-value
No hits better than threshold were found
Hits with E-value WORSE than threshold (may be not biologically meaningful):
d1mwva1 a.93.1.3 Catalase-peroxidase KatG 50 4.33e+00
d1wjua_ d.15.1.1 NEDD8 ultimate buster-1, NUB1 41 7.33e+00
d1pn0a3 d.16.1.2 Phenol hydroxylase 41 7.45e+00
d1mxa_3 d.130.1.1 S-adenosylmethionine synthetase 43 7.79e+00
d1ovna2 c.47.1.7 Windbeutel, N-terminal domain 42 8.13e+00
d1h16a_ c.7.1.1 Pyruvate formate-lyase, PFL 48 1.01e+01
d1ogya2 c.81.1.1 Periplasmic nitrate reductase alpha chain 48 1.30e+01
d1px5a1 a.160.1.2 2'-5'-oligoadenylate synthetase 1, OAS1, 41 1.31e+01
d1gwea_ e.5.1.1 Catalase I 46 1.34e+01
d3gcb__ d.3.1.1 Bleomycin hydrolase 46 1.36e+01
d1rfea_ b.45.1.1 Hypothetical protein Rv2991 44 1.40e+01
d1aru__ a.93.1.1 Fungal peroxidase (ligninase) 45 1.54e+01
d1r6va_ c.41.1.1 Fervidolysin 48 1.70e+01
d1gvfa_ c.1.10.2 Tagatose-1,6-bisphosphate aldolase 44 1.77e+01
d1uwda_ d.52.8.2 Hypothetical protein TM0487 40 1.87e+01
d1kshb_ b.1.18.8 GMP-PDE delta 40 1.91e+01
d1k12a_ b.18.1.15 Fucose binding lectin 43 1.92e+01
d1pmhx_ b.18.1.18 Beta-1,4-mannanase ManA 41 2.01e+01
d2nlra_ b.29.1.11 Family 12 endo-1,4-beta-glucanase (cellul 42 2.03e+01
d1hnf_1 b.1.1.1 CD2, first domain 38 2.23e+01
d1fada_ a.77.1.2 FADD (Mort1) 39 2.42e+01
d1eu1a2 c.81.1.1 Dimethylsulfoxide reductase (DMSO reductas 45 2.70e+01
d1ppja2 d.185.1.1 Cytochrome bc1 core subunit 1 43 2.70e+01
d1p53a1 b.1.1.3 Intercellular cell adhesion molecule-1 (ICA 37 2.71e+01
d1f00i1 b.1.14.1 Intimin 38 2.75e+01
d1f9va_ c.37.1.9 Kinesin motor Ncd (non-claret disjunctiona 42 2.90e+01
d1kcw_5 b.6.1.3 Ceruloplasmin 41 2.94e+01
d1adt_2 g.51.1.1 First Zn-domain of early E2A DNA-binding p 38 2.95e+01
d1m7sa_ e.5.1.1 Catalase I 43 3.12e+01
d1gw0a1 b.6.1.3 Laccase 41 3.13e+01
d1u2ca1 b.1.6.2 Dystroglycan, N-terminal domain 39 3.15e+01
d1hzta_ d.113.1.2 Isopentenyl diphosphate isomerase 41 3.17e+01
d1kexa_ b.18.1.2 B1 domain of neuropilin-1 41 3.22e+01
d1d7pm_ b.18.1.2 C2 domain of factor VIII 41 3.30e+01
d1jdra_ a.93.1.1 Cytochrome c peroxidase, CCP 42 3.60e+01
d1os1a2 c.109.1.1 Phosphoenolpyruvate (PEP) carboxykinase ( 40 3.65e+01
d1f42a3 b.1.2.1 The p40 domain of interleukin-12 (IL-12 bet 38 3.80e+01
d1a8i__ c.87.1.4 Glycogen phosphorylase 44 3.81e+01
d1q6wa_ d.38.1.4 Monoamine oxidase regulatory protein 40 3.82e+01
d2scub2 d.142.1.4 Succinyl-CoA synthetase, beta-chain, N-te 41 4.01e+01
d1gm5a2 b.40.4.9 RecG "wedge" domain 41 4.14e+01
d1lkxa_ c.37.1.9 Myosin S1, motor domain 42 4.15e+01
d1wuua1 d.14.1.5 Galactokinase 41 4.39e+01
d1d0ya2 c.37.1.9 Myosin S1, motor domain 42 4.47e+01
d1p80a2 e.5.1.1 Catalase II 42 4.76e+01
d1tqna_ a.104.1.1 Mammalian cytochrome P450 3a4 42 4.92e+01
d1djxa3 c.1.18.1 Phospholipase C isozyme D1 (PLC-D1) 41 5.00e+01
d1kcw_3 b.6.1.3 Ceruloplasmin 40 5.09e+01
d1hr6b2 d.185.1.1 Mitochondrial processing peptidase (MPP) 41 5.14e+01
d1fm4a_ d.129.3.1 Major tree pollen allergen 39 5.16e+01
d1j8ca_ d.15.1.1 Ubiquitin-like N-terminal domain of PLIC-2 35 5.26e+01
d1uaia_ b.29.1.18 Polyguluronate lyase 39 5.27e+01
d1cmba_ a.43.1.5 Met repressor, MetJ (MetR) 36 5.29e+01
d1u5ua_ e.5.1.2 Allene oxide synthase-lipoxygenase protein, 40 5.82e+01
d1m22a_ c.117.1.1 Peptide amidase Pam 42 5.95e+01
d1ppjb2 d.185.1.1 Cytochrome bc1 core subunit 2 40 6.35e+01
d1ddf__ a.77.1.2 Fas 37 6.44e+01
d1qpxa1 b.1.11.1 Pilus chaperone PapD, N-domain 37 6.45e+01
d1wida_ b.142.1.2 DNA-binding protein RAV1 37 6.48e+01
d1qw9a1 b.71.1.2 Alpha-l-arabinofuranosidase 37 6.61e+01
d1vpma_ d.38.1.1 Acyl-CoA hydrolase BH0798 38 6.78e+01
d1svma_ c.37.1.20 Papillomavirus large T antigen helicase d 40 6.95e+01
d1wj9a2 d.58.53.1 Hypothetical protein TTHB192 36 7.05e+01
d1q8ya_ d.144.1.7 Sky1p 39 7.10e+01
d1v9ya_ d.110.3.2 Direct oxygen sensor protein, DOS 37 7.35e+01
d1tig__ d.68.1.1 Translation initiation factor IF3, C-termi 35 7.44e+01
d1khba1 c.91.1.1 Cytosolic phosphoenolpyruvate carboxykinas 39 7.47e+01
d1gr0a1 c.2.1.3 Myo-inositol 1-phosphate synthase 38 7.66e+01
d1ogya1 b.52.2.2 Periplasmic nitrate reductase alpha chain, 35 7.74e+01
d1kzla2 b.43.4.3 Riboflavin synthase 36 7.82e+01
d1pn5a1 a.77.1.5 NALP1 35 7.83e+01
d1dar_2 c.37.1.8 Elongation factor G (EF-G), N-terminal (G) 38 7.90e+01
d1gy8a_ c.2.1.2 Uridine diphosphogalactose-4-epimerase (UDP 39 8.05e+01
d1oaoc_ e.26.1.3 Bifunctional carbon monoxide dehydrogenase 39 8.06e+01
d1xpna_ b.3.7.1 Hypothetical protein PA1324 36 8.08e+01
d1j0ma2 b.24.1.1 Xanthan lyase 35 8.10e+01
d1vpba_ d.283.1.1 Putative modulator of DNA gyrase BT3649 41 8.19e+01
d1qmha1 c.47.2.1 RNA 3'-terminal phosphate cyclase, RPTC, i 35 8.23e+01
d1i8da2 b.43.4.3 Riboflavin synthase 36 8.25e+01
d1daba_ b.80.1.7 Virulence factor P.69 pertactin 43 8.49e+01
d1ubkl_ e.18.1.1 Nickel-iron hydrogenase, large subunit 41 8.56e+01
d1fnoa3 d.58.19.1 Peptidase T (tripeptidase) 35 8.62e+01
d1t2wa_ b.100.1.1 Sortase A 37 8.74e+01
d1s4ka_ a.35.1.6 Putative cytoplasmic protein YdiL 35 8.80e+01
d1ll8a_ d.110.3.5 N-terminal PAS domain of Pas kinase 37 9.00e+01
d1njha_ b.128.1.1 Hypothetical protein YojF 35 9.07e+01
d1rqpa1 b.141.1.1 5'-fluoro-5'-deoxyadenosine synthase 35 9.14e+01
d1q25a1 b.64.1.1 Cation-independent mannose-6-phosphate rec 36 9.22e+01
d1kb9a2 d.185.1.1 Cytochrome bc1 core subunit 1 39 9.27e+01
d2pvaa_ d.153.1.3 Penicillin V acylase 39 9.38e+01
d2cuaa_ b.6.1.2 Cytochrome c oxidase 35 9.41e+01
d1g6oa_ c.37.1.11 Hexameric traffic ATPase, HP0525 38 9.71e+01
d1eo9a_ b.3.6.1 Protocatechuate-3,4-dioxygenase, alpha chai 38 9.77e+01
d1a3qa2 b.2.5.3 p52 subunit of NF-kappa B (NFKB), N-termina 36 9.88e+01
d1ds1a_ b.82.2.2 Clavaminate synthase 40 9.97e+01
Alignments:
Subject = d1mwva1 a.93.1.3 Catalase-peroxidase KatG
length=377 filtered_length=376 Neff=15.117
Smith-Waterman score = 50 Evalue = 4.33e+00
QUERY 15 YMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKV 102
CONSENSUS_1 15 YVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKA 102
++ +++++ +++ ++ +G + +++D++GK+K + +T+ ++ ++++ + +A+ ++Y+++++ +++++++W ++ D+ ++
CONSENSUS_2 287 GEWKKSPAGANQWEPVDGEDLVPDADDKTGKVKWTLLTSDLVLGSDP=ELRAIVEVYADNQEK~~~~FFDDFAAAWVKLGNLDVGPLT 369
d1mwva1 316 WELTKSPAGAHQWVAKGADAVIPDAFDPSKKHRPTMLTTDLSLRFDP=AYEKISRRFHENPEQ~~~~FADAFARAWFKLTHRDMGPRA 398
Subject = d1wjua_ d.15.1.1 NEDD8 ultimate buster-1, NUB1
length=100 filtered_length=92 Neff=10.967
Smith-Waterman score = 41 Evalue = 7.33e+00
QUERY 68 LRLYVDQDDN=skneISSIEVKSYEEIQKADLPEKVKDKFTI 108
CONSENSUS_1 68 LKLYVKGKKG=....IKGIEVTSWEEVKKEDIPKKALEKLEV 108
L+++VK G ++ EV++ + E++ +K+++K+++
CONSENSUS_2 18 LQIFVKTLTGK~~~~TITLEVEPSDTITVENVKAKIADKEGI 55
d1wjua_ 18 IEVFLPPRLKK~~~~DRKNLLETRLHITGRELRSKIAETFGL 55
Subject = d1pn0a3 d.16.1.2 Phenol hydroxylase
length=101 filtered_length=101 Neff=9.851
Smith-Waterman score = 41 Evalue = 7.45e+00
QUERY 63 NKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 63 RKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
R+G +++LYV + G +K++E ++ +++++EDI ++A++ L
CONSENSUS_2 41 REGGLVRLYVQLPGG~~~~AKAGERADRSDITLEDILEAARKIL 80
d1pn0a3 41 RENNLVRFYVQLQAR~~~~AEKGGRVDRTKFTPEVVIANAKKIF 80
Subject = d1mxa_3 d.130.1.1 S-adenosylmethionine synthetase
length=152 filtered_length=151 Neff=10.053
Smith-Waterman score = 43 Evalue = 7.79e+00
QUERY 46 KKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKD 104
CONSENSUS_1 46 EKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALE 104
++ ++++ G+ ++D +L++ Y K+ +G +G+E +WE+++K D+ KKA++
CONSENSUS_2 99 RENFDLRPGGIIKDLDLLRPIYRKT===AAYG~~~~HFGREDFPWEKLDKVDALKKAAG 150
d1mxa_3 99 REFFDLRPYGLIQMLDLLHPIYKET===AAYG~~~~HFGREHFPWEKTDKAQLLRDAAG 150
Subject = d1ovna2 c.47.1.7 Windbeutel, N-terminal domain
length=101 filtered_length=99 Neff=15.081
Smith-Waterman score = 42 Evalue = 8.13e+00
QUERY 17 QIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFTI 108
CONSENSUS_1 17 QITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLEV 108
++++ +K+ ++++D+ ++++++ D +E + + +++++ +++ L++ ++ + ++++++++ + ++ED+ + ++++L++
CONSENSUS_2 17 IYEELAKELKGDDDDVVIAKVDVAKVDADENK======DLASKYGVSIRGFPTLLLFKNGK~~~~KVPVPYDYEGARTLEDLVEFLKKNLGK 98
d1ovna2 38 AFTAFSKSAHKATKDLLIATVGVKDYGELENK======ALGDRYKVDDKNFPSIFLFKGNA~~~~DEYVQLPSHVDVTLDNLKAFVSANTPL 119
Subject = d1h16a_ c.7.1.1 Pyruvate formate-lyase, PFL
length=759 filtered_length=741 Neff=12.630
Smith-Waterman score = 48 Evalue = 1.01e+01
QUERY 43 DGVKKQITFRSTKKENDHKLNKY===AFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKD 104
CONSENSUS_1 43 DGKEKEVTFTAGKKELDHNLRKG===AYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALE 104
+G ++++ + ++D++LRK+ A+L+ Y +++ + ++G++ +++ V+++ + ++ ++
CONSENSUS_2 661 NGILLNLKLVPSALGGDEGLRKENLVALLRGYFDKSAS~~~~VLGGHHIQFNVVDRDTLLDAQKH 721
d1h16a_ 661 DGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEAS~~~~IEGGQHLNVNVMNREMLLDAMEN 721
Subject = d1ogya2 c.81.1.1 Periplasmic nitrate reductase alpha chain
length=649 filtered_length=647 Neff=15.345
Smith-Waterman score = 48 Evalue = 1.30e+01
QUERY 40 YDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQK 95
CONSENSUS_1 40 YDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKK 95
+D+D +K ++++ ++ + ++R G+Y+K +++++++ + G++ +++EE+K+
CONSENSUS_2 222 VDKDFIAKHTEGFDEALDSGYGPRDGHYKKSTWGYGDD~~~~ALGHPRCNFEELKA 273
d1ogya2 243 VNRDFVDRHTNFALGATDIGYGLRPEHQLQLAAKGAAD~~~~AGAMTPTDFETFAA 294
Subject = d1px5a1 a.160.1.2 2'-5'-oligoadenylate synthetase 1, OAS1,
length=146 filtered_length=145 Neff=8.317
Smith-Waterman score = 41 Evalue = 1.31e+01
QUERY 36 TLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSY 90
CONSENSUS_1 36 TLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSW 90
T+ +++ +++ +++ G++++ + ++K+ L +Y++ ++ ++ +V ++
CONSENSUS_2 36 TVYAWEQGCGKDDFNLAEGFRTVLELVLKYRQLCIYWTVYYD~~~~FEDPTVRNF 86
d1px5a1 36 TVYAWEQGSRKTDFSTAQGFQTVLELVLKHQKLCIFWEAYYD~~~~FTNPVVGRC 86
Subject = d1gwea_ e.5.1.1 Catalase I
length=471 filtered_length=469 Neff=13.196
Smith-Waterman score = 46 Evalue = 1.34e+01
QUERY 5 SLNRIGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKD 104
CONSENSUS_1 5 QLNPIGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALE 104
+ N +GG + + ++ ++K +++ ++Y+Y+ D+D ++ +++ +++ +++ +++ + + ++ I++++++ + +V++ D+ K++++
CONSENSUS_2 356 EPNSFGGGRPEEPAFAEPPLKLSGDAVRYRYASEADDDDFSQAGALYRNLLSPAEKERLVDNLAGELGGVTEE~~~~IRERVLAYFAKVDP=DLGKRVAK 450
d1gwea_ 383 VPNSNGDSWSDETGPVDDGWEADGTLTREAQALRADDDDFGQAGTLVREVFSDQERDDFVETVAGALKGVRQD~~~~VQARAFEYWKNVDA=TIGQRIED 477
QUERY 105 KFTI 108
CONSENSUS_1 105 KLEV 108
+L++
CONSENSUS_2 451 ALGL 454
d1gwea_ 478 EVKR 481
Subject = d3gcb__ d.3.1.1 Bleomycin hydrolase
length=458 filtered_length=448 Neff=13.609
Smith-Waterman score = 46 Evalue = 1.36e+01
QUERY 13 VYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFT 107
CONSENSUS_1 13 EYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLE 107
++ ++++++ + + +++ + L GY+ D +++++++ K + + +++Y+++ ++ ++ +++ ++ V+K+ +PK++L++L+
CONSENSUS_2 354 GIDLGLDKAERLDCGESLLDHAVLLVGYGLDENDGGPKYWIVKNSWGEDWGEKGYFRM=SRDWFD~~~~ECVYGIV====VDKKYLPKELLKILD 439
d3gcb__ 354 GYNLPQQKASRIRYHESLMTHAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVM=TQKYFE~~~~EYCFQIV====VDINELPKELASKFT 439
Subject = d1rfea_ b.45.1.1 Hypothetical protein Rv2991
length=160 filtered_length=158 Neff=17.962
Smith-Waterman score = 44 Evalue = 1.40e+01
QUERY 9 IGKDVYYMQIKGEGTIEKVDGRNLR=NYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADL 98
CONSENSUS_1 9 IGGDEYYVQITGDGKKKGEKGDGGY=SYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDI 98
+ ++++Y+ ++++++K ++ + + + + + D + + V+++++ ++++++ K+++L+ ++++ G ++ E + + + +D+
CONSENSUS_2 44 YDDGGLYFFTSAGSRKARNLAANPRVALLVDDPDGLALYRSVRVEGTAELVEDEEAKEELLSRLLEKYLG~~~~GLADELSEPLASRPDDW 130
d1rfea_ 44 VIDGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTG~~~~PYTDECKPMVDQMMNKR 130
Subject = d1aru__ a.93.1.1 Fungal peroxidase (ligninase)
length=318 filtered_length=313 Neff=14.645
Smith-Waterman score = 45 Evalue = 1.54e+01
QUERY 13 VYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEI 93
CONSENSUS_1 13 EYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEV 93
+++V++ + G + +++++++++++ + +++E+ +T+ ++ L+++ R +A+ + ++++++ +++++++W ++
CONSENSUS_2 185 DFFVNLLDLGTELTPSPFDNGYFK======NLLRGEGLLTSDLALLSDP=RTRAIVERFAANQEA~~~~FFDDFAAAWVKL 254
d1aru__ 203 QFYIETLLKGTTQPGPSLGFAEEL======SPFPGEFRMRSDALLARDS=RTACRWQSMTSSNEV~~~~MGQRYRAAMAKM 272
Subject = d1r6va_ c.41.1.1 Fervidolysin
length=649 filtered_length=633 Neff=17.374
Smith-Waterman score = 48 Evalue = 1.70e+01
QUERY 7 NRIGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKAD 97
CONSENSUS_1 7 NPIGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKED 97
+++ +++Y+V+++++ ++++ +++ G+++++ + D + ++++ +A+K+++D+ ++++ +V +++ +K ++++ +++ + +
CONSENSUS_2 5 ASVVPGRYIVKFKDGVSAAALAAALGAVVLGRLGELDVYHLALRGLAVKLLKDVLRLLALPGVKAVEPDVK~~~~LKRAKLDALRKDPDVE 91
d1r6va_ 27 GEYTEGKILVGYNDRSEVDKIVKAVNGKVVLELPQIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYK~~~~RELIKPTVVKPNPDMY 113
Subject = d1gvfa_ c.1.10.2 Tagatose-1,6-bisphosphate aldolase
length=284 filtered_length=282 Neff=13.989
Smith-Waterman score = 44 Evalue = 1.77e+01
QUERY 39 AYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFTI 108
CONSENSUS_1 39 GYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLEV 108
G +++ +K +++ ++K ++D LR+ + ++ +++ +G+++ ++ + +E I + ++EK+E+
CONSENSUS_2 211 GVPDEEIRKAIKLGVAKVNIDTDLRLAFTAAVREYLAEN~~~~PDGFDPRKLLKPAREAIKEVVKEKIEL 276
d1gvfa_ 211 DVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAEN~~~~PQGNDPRYYMRVGMDAMKEVVRNKINV 276
Subject = d1uwda_ d.52.8.2 Hypothetical protein TM0487
length=102 filtered_length=101 Neff=15.762
Smith-Waterman score = 40 Evalue = 1.87e+01
QUERY 48 QITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFTI 108
CONSENSUS_1 48 EVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLEV 108
++T+T+ +L +++R++ +L+ + + + ++E+T + +++ I ++A+++L++
CONSENSUS_2 46 TLTLTTPGCPLADLIRDDIEAALKALPGVE~~~~DVEVELTWDPPWTPDRISEEARLALGL 102
d1uwda_ 46 LMTMTTPMCPLAGMILSDAEEAIKKIEGVN~~~~NVEVELTFDPPWTPERMSPELREKFGV 102
Subject = d1kshb_ b.1.18.8 GMP-PDE delta
length=149 filtered_length=146 Neff=7.247
Smith-Waterman score = 40 Evalue = 1.91e+01
QUERY 5 SLNRIGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLR 69
CONSENSUS_1 5 QLNPIGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLK 69
+L + ++ ++ +IT+D ++ + + + ++ ++ + +E++F++G++ + +L +++Y++
CONSENSUS_2 20 KLRDLETGKVLFEITKDPSVPDIEIEARFPPKF==LKLKAVGAEIEFSVGEPIKNFRLIERHYFR 82
d1kshb_ 20 NLRDAETGKILWQGTEDLSVPGVEHEARVPKKI==LKCKAVSRELNFSSTEQMEKFRLEQKVYFK 82
Subject = d1k12a_ b.18.1.15 Fucose binding lectin
length=158 filtered_length=155 Neff=18.148
Smith-Waterman score = 43 Evalue = 1.92e+01
QUERY 12 DVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEE 92
CONSENSUS_1 12 DEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEE 92
++Y +Q+ +DG+ ++++ ++ ++G ++G+ ++++++ ++ + Y++++ +G++G ++ E++ + +
CONSENSUS_2 88 TSYKIQVSDDGTSWDGVN===WVKVFTGNSDAGTVVTILLDPPVVAR========YVRILPTGSNG~~~~LSLAELEVYGC 153
d1k12a_ 88 SGAEINIGQHLASNGVNN===PECSVIGSMATGETKTFHCPAPMIGR========YVVTYLPTSES~~~~LHLCEVEVNVD 153
Subject = d1pmhx_ b.18.1.18 Beta-1,4-mannanase ManA
length=183 filtered_length=167 Neff=1.665
Smith-Waterman score = 41 Evalue = 2.01e+01
QUERY 23 TIEKVDGRNLRNYTLPAYDED~~GVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEI~QKADLPEKVKDKFTI 108
CONSENSUS_1 23 KKKGEKGDGGYSYTLKGYDED~~GKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEV~KKEDIPKKALEKLEV 108
+K++ G++ +++L + D + + +++ + + + + L G + + ++++++ IK I+++++ + K DI+ ++++K +V
CONSENSUS_2 73 GKFDFTGYKTLEFELFIPNDD..KISGGLAVAVVIDDGWKIL==GDFFNINYNDGNA~~~~IK=INGKDYAVI.KCFDILYDFRTKARV 154
d1pmhx_ 73 GQFDFTGYKSVEFEMFIPYDEfsKSQGGFAYKVVINDGWKEL==GSEFNITANAGKK~~~~VK=INGKDYTVIhKAFAIPEDFRTKKRA 154
Subject = d2nlra_ b.29.1.11 Family 12 endo-1,4-beta-glucanase (cellul
length=222 filtered_length=219 Neff=11.539
Smith-Waterman score = 42 Evalue = 2.03e+01
QUERY 22 GTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYE 91
CONSENSUS_1 22 GKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWE 91
G++ G+ + GG++++L + +G+ K ++F A++ + + ++ +++L+ V++++ ++++++T+++
CONSENSUS_2 135 GSPVGTVTLGGTTWDL=YKGPNGGWKVYSFVAPGPITSFSGDLKDFLDYLVDNGYL~~~~SDSQYLTVVQ 199
d2nlra_ 135 GSPVGTASVGGRTWEV=WSGGNGSNDVLSFVAPSAISGWSFDVMDFVRATVARGLA~~~~ENDWYLTSVQ 199
Subject = d1hnf_1 b.1.1.1 CD2, first domain
length=101 filtered_length=97 Neff=3.990
Smith-Waterman score = 38 Evalue = 2.23e+01
QUERY 11 KDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGV 45
CONSENSUS_1 11 GDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGK 45
+D+Y V ++G+ K+K+ + D+ Y++++YD+DGK
CONSENSUS_2 54 DDTYEVLANGTLKIKHLMRDDSGIYKVSVYDKDGK 88
d1hnf_1 54 KDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGK 88
Subject = d1fada_ a.77.1.2 FADD (Mort1)
length=95 filtered_length=92 Neff=15.707
Smith-Waterman score = 39 Evalue = 2.42e+01
QUERY 45 VKKQITFRSTKKENDHKLNKYAFLRLYVD==QDDNskneISSIEVKSYEEIQKADLPEKVKDKFT 107
CONSENSUS_1 45 KEKEVTFTAGKKELDHNLRKGAYLKLYVK==GKKG....IKGIEVTSWEEVKKEDIPKKALEKLE 107
+E+E++ ++ ++D + + A+L+L ++ GK++ + G+ ++++++++++D+ +K+++ LE
CONSENSUS_2 34 SEEEIDRIEEDNPRDLKEQAYALLRLWKEREGKDA~~~~TVGALLEALRKIGRRDLAEKLEDLLE 94
d1fada_ 34 SEAKMDGIEEKYPRSLSERVRESLKVWKNAEKKNA~~~~SVAGLVKALRTCRLNLVADLVEEAQE 94
Subject = d1eu1a2 c.81.1.1 Dimethylsulfoxide reductase (DMSO reductas
length=607 filtered_length=605 Neff=15.122
Smith-Waterman score = 45 Evalue = 2.70e+01
QUERY 23 TIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFT 107
CONSENSUS_1 23 KKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLE 107
++K++K G ++ +++ + +F +++ L++ L ++++L+ +++ G ++G++ +++V+ +++ + + +KL+
CONSENSUS_2 2 VVKDGKVVGVEGDPDHPANRGLLCVKGDFVHSPDRLKYPLVRKGWLEKGGGADRG~~~~LRGDGE==FVRVSWDEALDLVADKLK 80
d1eu1a2 17 RVENGRAVAFEPWDKDPAPSHQLPGVLDSIYSPTRIKYPMVRREFLEKGVNADRS~~~~TRGNGD==FVRVTWDEALDLVARELK 95
Subject = d1ppja2 d.185.1.1 Cytochrome bc1 core subunit 1
length=196 filtered_length=195 Neff=18.354
Smith-Waterman score = 43 Evalue = 2.70e+01
QUERY 42 EDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 42 EDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
E+ K++ ++ +++E + L ++ + L + G++ +++++++E+V++ED+ + A++ L
CONSENSUS_2 109 ERAKAQLLAGLLLSLESPSGLASRLGRQLLYGGDPD~~~~PLEELLERIEAVTLEDVKRVAKKYL 169
d1ppja2 122 LRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRI~~~~PLAEWESRIAEVDARVVREVCSKYF 182
Subject = d1p53a1 b.1.1.3 Intercellular cell adhesion molecule-1 (ICA
length=84 filtered_length=84 Neff=5.440
Smith-Waterman score = 37 Evalue = 2.71e+01
QUERY 44 GVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEV 87
CONSENSUS_1 44 GKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEV 87
G+ +++++A+++ + + +A L++ + ++++E+
CONSENSUS_2 42 GPPAQLLLNASEEDDGRSFFCSAALEVAGELLLK~~~~NQTLEL 81
d1p53a1 42 GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHK~~~~NQTREL 81
Subject = d1f00i1 b.1.14.1 Intimin
length=95 filtered_length=91 Neff=13.264
Smith-Waterman score = 38 Evalue = 2.75e+01
QUERY 16 MQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKEND 59
CONSENSUS_1 16 VQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELD 59
+++++D+ + ++++ ++ T++ +++ + +EVTF+A++ +L+
CONSENSUS_2 6 LTVSKDNAVADGVDAITLTATVTDNGNPVAGQEVTFSATNGTLS 49
d1f00i1 6 IKADKTTAVANGQDAITYTVKVMKGDKPVSNQEVTFTTTLGKLS 49
Subject = d1f9va_ c.37.1.9 Kinesin motor Ncd (non-claret disjunctiona
length=325 filtered_length=324 Neff=11.707
Smith-Waterman score = 42 Evalue = 2.90e+01
QUERY 9 IGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADL 98
CONSENSUS_1 9 IGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDI 98
++ D+ ++ +D ++ + +GY+ + +Y + G K+ T+ ++++ + ++ ++ + ++ +++++ ++ + S+ E+ E+I
CONSENSUS_2 41 FDPDATQEEVFEDVAPLVDSVLDGYNGCIFAYGQTGSGKTYTMLGDDRGIIPRALEDLFERIEKLKDEN~~~~LEFLVRVSYLEIYNEEI 126
d1f9va_ 58 FDQQDTNVDVFKEVGQLVQSSLDGYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKG~~~~WDYKVNCEFIEIYNENI 143
Subject = d1kcw_5 b.6.1.3 Ceruloplasmin
length=148 filtered_length=147 Neff=16.905
Smith-Waterman score = 41 Evalue = 2.94e+01
QUERY 15 YMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQD 75
CONSENSUS_1 15 YVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGK 75
+++ +++++ + K++ ++YT ++++ +++ ++F++G+ + ++++G +++++K+K
CONSENSUS_2 12 FLDKGDNRIGGKYKKVVFREYTDGTFTDGVERPAWLFNGGIPGPLIRAEVGDTVRVTLKNK 72
d1kcw_5 43 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNM 103
Subject = d1adt_2 g.51.1.1 First Zn-domain of early E2A DNA-binding p
length=120 filtered_length=119 Neff=5.966
Smith-Waterman score = 38 Evalue = 2.95e+01
QUERY 45 VKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEI 93
CONSENSUS_1 45 KEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEV 93
KE++V+++ ++++ + L++G + VK++ G +++++ + V
CONSENSUS_2 28 KEHLVELDVTSENGQRALKEGPGRAKIVKNRWG~~~~RNVVQLRNEDAV 72
d1adt_2 28 KEHVIEMDVTSENGQRALKEQSSKAKIVKNRWG~~~~RNVVQISNTDAR 72
Subject = d1m7sa_ e.5.1.1 Catalase I
length=460 filtered_length=459 Neff=13.100
Smith-Waterman score = 43 Evalue = 3.12e+01
QUERY 40 YDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPE 100
CONSENSUS_1 40 YDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPK 100
+++DG+ + V F+ ++ +NL ++ KL + K+ ++ + +E+++++D PK
CONSENSUS_2 175 VNADGERVYVKFHFKPDQGVKNLTDDEAAKL===AGKD~~~~PDFHTRDLYEAIEAGDFPK 228
d1m7sa_ 199 VNAKGEVHYVKFHWKSLQGIKNLDPKEVAQV===QSKD~~~~YSHLTNDLVGAIKKGDFPK 252
Subject = d1gw0a1 b.6.1.3 Laccase
length=147 filtered_length=146 Neff=17.582
Smith-Waterman score = 41 Evalue = 3.13e+01
QUERY 13 VYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEV 87
CONSENSUS_1 13 EYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEV 87
++++ + ++++ + + D ++++ +D+ + + +T+++++ ++R+G ++++V+++ + ++++ +
CONSENSUS_2 7 DAALVLPAAAATREYEFDLTVGEVTIAPDGGVERPVWTINGQFPGPLIRVREGDRVRIRVVNNLT~~~~DEPHSI 77
d1gw0a1 22 DYEVSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLV~~~~TNGTSI 92
Subject = d1u2ca1 b.1.6.2 Dystroglycan, N-terminal domain
length=103 filtered_length=101 Neff=17.366
Smith-Waterman score = 39 Evalue = 3.15e+01
QUERY 26 KVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDH 60
CONSENSUS_1 26 GEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDH 60
++++ G YS+T+ + D +G++ + TFT + +++++
CONSENSUS_2 63 TADDVGTYSITVTATDGGGATASATFTITVNPVND 97
d1u2ca1 63 LDTDKGVHYISVSAARLGANGSHVPQTSSVFSIEV 97
Subject = d1hzta_ d.113.1.2 Isopentenyl diphosphate isomerase
length=153 filtered_length=149 Neff=17.416
Smith-Waterman score = 41 Evalue = 3.17e+01
QUERY 48 QITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKD 104
CONSENSUS_1 48 EVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALE 104
++++ A+++ ++ + ++++L+++G+ ++++EV++++ V+++++++ +++
CONSENSUS_2 71 RFRYLASQPGGFPEHLLLGVFALRLDGELV~~~~PDPDEVEDARWVSLDELLELLAA 123
d1hzta_ 71 DFRYRATDPSGIVENEVCPVFAARTTSALQ~~~~INDDEVMDYQWCDLADVLHGIDA 123
Subject = d1kexa_ b.18.1.2 B1 domain of neuropilin-1
length=155 filtered_length=152 Neff=17.283
Smith-Waterman score = 41 Evalue = 3.22e+01
QUERY 12 DVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSY 90
CONSENSUS_1 12 DEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSW 90
++Y++Q+ +DG++ ++ DGG + +++G ++ + ++ +++ ++ + Y++++ + +G ++ ++ +
CONSENSUS_2 84 TSYKLQYSDDGENWTTVKDGGGDKVFAGNSDGDTVVLNLLDPPVVAR========YVRILPLTWHG~~~~GIALRLELY 150
d1kexa_ 84 KTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITR========FVRIKPATWET~~~~GISMRFEVY 150
Subject = d1d7pm_ b.18.1.2 C2 domain of factor VIII
length=159 filtered_length=157 Neff=17.115
Smith-Waterman score = 41 Evalue = 3.30e+01
QUERY 12 DVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSY 90
CONSENSUS_1 12 DEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSW 90
++Y +Q+ +DG++ ++ DGG + +++G ++ + ++ +++ ++ + Y++++ + +G +++ ++ +
CONSENSUS_2 88 TSYKLQYSDDGSNWTTVKDGGGDKVFTGNTDGDTVVLNLLDPPIVAR========YVRILPLTWHG~~~~RIALRLELY 154
d1d7pm_ 88 KEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNCLDPPLLTR========YLRIHPQSWVH~~~~QIALRMEVL 154
Subject = d1jdra_ a.93.1.1 Cytochrome c peroxidase, CCP
length=281 filtered_length=278 Neff=15.065
Smith-Waterman score = 42 Evalue = 3.60e+01
QUERY 38 PAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 38 KGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
++Y ++ K++++ +T+ ++ L+++ + +A+++LY+++++ ++++++++ ++ D++ +++ ++
CONSENSUS_2 206 NAYYKNLKAGKGLLTSDLALLSDP=ETRALVELYAANQEA~~~~FFKDFAAAMVKLGNLDVLTGSDGEI 269
d1jdra_ 219 NNEQWDSKSGYMMLPTDYSLIQDP=KYLSIVKEYANDQDK~~~~FFKDFSKAFEKLLENGITFPKDAPS 282
Subject = d1os1a2 c.109.1.1 Phosphoenolpyruvate (PEP) carboxykinase (
length=224 filtered_length=219 Neff=10.726
Smith-Waterman score = 40 Evalue = 3.65e+01
QUERY 41 DEDGVKKQITFRST~K~KENDHKLNKYAFLRLYVDQDDNskneISSIEV 87
CONSENSUS_1 41 DEDGKEKEVTFTAG~K~KELDHNLRKGAYLKLYVKGKKG....IKGIEV 87
+++ E+++ + + K K++++++ ++++ +L+ + ++ ++G+++
CONSENSUS_2 71 RDPSTEDTIWWGDV.K.KNNNKPISPETFDALKERVLDY~~~~LSGKDL 115
d1os1a2 71 RDDTTRDTFWWADKgKgKNDNKPLSPETWQHLKGLVTRQ~~~~LSGKRL 115
Subject = d1f42a3 b.1.2.1 The p40 domain of interleukin-12 (IL-12 bet
length=95 filtered_length=92 Neff=16.652
Smith-Waterman score = 38 Evalue = 3.80e+01
QUERY 10 GKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneIS 83
CONSENSUS_1 10 GGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IK 83
+++++ ++ + ++++G + +Y++ +++ +E +V + ++++ + + +++ ++++ +++G ++
CONSENSUS_2 15 KSGSLLLSWEPPESADVDGGSFILGYEVRYREKGSDEWKVVEVTSFTVTGLKPGTEYVFRVRARNAAG~~~~VG 84
d1f42a3 15 NSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDKTSATVICRKNASISVRAQDRYY~~~~SS 84
Subject = d1a8i__ c.87.1.4 Glycogen phosphorylase
length=829 filtered_length=821 Neff=14.157
Smith-Waterman score = 44 Evalue = 3.81e+01
QUERY 6 LNRIGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKA 96
CONSENSUS_1 6 LNPIGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKE 96
++++G+++ ++ +++ ++++ ++DG ++L D++ KE ++++G+ +++++ + ++ + +++++ +++ S+ E++++
CONSENSUS_2 694 AEEVGEENIFIFGLTAEEVEELRADGYDARDLYEADPELKEVLDLIASGFFSPGDPGLFEPLVDSLLENDYY~~~~LVLADFDSYLEAQEK 780
d1a8i__ 694 AEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRF~~~~KVFADYEEYVKCQER 780
Subject = d1q6wa_ d.38.1.4 Monoamine oxidase regulatory protein
length=133 filtered_length=132 Neff=17.833
Smith-Waterman score = 40 Evalue = 3.82e+01
QUERY 11 KDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGV 45
CONSENSUS_1 11 GDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGK 45
GD+++++++ +++ +++++G+ ++++ ++++DG+
CONSENSUS_2 84 GDTLRAEVEVLEVRESKGRRGIVTLRVEVLNQDGE 118
d1q6wa_ 102 GDTIAASAEVVEKQDFDEKSGVVTYKLEVKNQRGE 136
Subject = d2scub2 d.142.1.4 Succinyl-CoA synthetase, beta-chain, N-te
length=204 filtered_length=203 Neff=16.000
Smith-Waterman score = 41 Evalue = 4.01e+01
QUERY 16 MQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 16 VQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
V+++++ + +E+ +++ +++L++++ + ++++V+ ++LD+ +++ YL +++++++G + + + V E++ +++ E++
CONSENSUS_2 26 VKLALSSEEAVEAAEELLGKRLVTAQTGAEGLLVNGVLVEEMLDI==ARELYLGVLLDRAFG~~~~PVVLIGSTEGGVDIEEVADTSPELI 110
d2scub2 60 VKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDI==AKELYLGAVVDRSSR~~~~RVVFMASTEGGVEIEKVAEETPHLI 144
Subject = d1gm5a2 b.40.4.9 RecG "wedge" domain
length=180 filtered_length=178 Neff=17.669
Smith-Waterman score = 41 Evalue = 4.14e+01
QUERY 5 SLNRIGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLY==VDQDDNskneISSIEVKSYEEIQKADLPEKV 102
CONSENSUS_1 5 QLNPIGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLY==VKGKKG....IKGIEVTSWEEVKKEDIPKKA 102
+++ ++ +E ++ + ++++ ++ +G +++ D++G+ + V F+ + ++L + L++GA L ++ V+ ++G ++++++ ++E ++ E+ ++
CONSENSUS_2 53 PIAELRPGEKVTVAGIVVSVRVIRTKRGKMLIVTLEDGTGSLELVFFNGVYAKLKKLLKVGARLLVSGKVERFDG~~~~GLQLVHPDYELLDEEEALEGR 148
d1gm5a2 53 KLNDLLPGEKVTTQGKIVSVETKKFQNMNILTAVLSDGLVHVPLKWFNQDYLQTYLKQLTGKEVFVTGTVKSNAY~~~~TGQYEIHNAEVTPKEGEYVRR 148
QUERY 103 KDKF 106
CONSENSUS_1 103 LEKL 106
L+ +
CONSENSUS_2 149 LVPV 152
d1gm5a2 149 ILPI 152
Subject = d1lkxa_ c.37.1.9 Myosin S1, motor domain
length=654 filtered_length=654 Neff=11.142
Smith-Waterman score = 42 Evalue = 4.15e+01
QUERY 52 RSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSY 90
CONSENSUS_1 52 TAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSW 90
+A + +D R G ++++++++K I G++++++
CONSENSUS_2 110 NAKTVRNDNSSRFGKFIEIHFDAKGK~~~~IVGAKIETY 144
d1lkxa_ 140 NAKTLRNDNSSRFGKYMEMQFNAVGS~~~~PIGGKITNY 174
Subject = d1wuua1 d.14.1.5 Galactokinase
length=190 filtered_length=189 Neff=17.561
Smith-Waterman score = 41 Evalue = 4.39e+01
QUERY 9 IGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKV 102
CONSENSUS_1 9 IGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKA 102
+GG ++ + I+ + + ++ D+G++ + + + ++++++ ++++L+ + ++++ L++ ++ K ++G+++++++ + ++DIP +A
CONSENSUS_2 22 YGGPVLAAAIDLYTYVAVRPRDDGKIRLSSLDLDIDLGDILELSLDGLGLIVDDGAEGWLNYVLGVLKL~~~~LRGKGLKGLDILIDSDIPLGA 111
d1wuua1 47 NQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANYVKGVIQY~~~~YPAAPLPGFSAVVVSSVPLGG 136
Subject = d1d0ya2 c.37.1.9 Myosin S1, motor domain
length=691 filtered_length=691 Neff=11.627
Smith-Waterman score = 42 Evalue = 4.47e+01
QUERY 52 RSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSY 90
CONSENSUS_1 52 TAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSW 90
+A + +D R G ++++++++K I G++++++
CONSENSUS_2 159 NAKTVRNDNSSRFGKFIEIHFDAKGK~~~~IVGAKIETY 193
d1d0ya2 181 NAKTTRNNNSSRFGKFIEIQFNNAGF~~~~ISGASIQSY 215
Subject = d1p80a2 e.5.1.1 Catalase II
length=545 filtered_length=542 Neff=13.530
Smith-Waterman score = 42 Evalue = 4.76e+01
QUERY 28 DGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPE 100
CONSENSUS_1 28 KGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPK 100
+G+G ++L +++DG+ + V F+ ++ +NL ++ KL + K+ ++ + +E+++++D P+
CONSENSUS_2 218 NGFGVHTFKL==VNADGERVYVKFHFKPDQGVKNLTDDEAAKL===AGKD~~~~PDFHRRDLYEAIEAGDYPE 281
d1p80a2 244 EGFGIHTFRL==INAEGKATFVRFHWKPLAGKASLVWDEAQKL===TGRD~~~~PDFHRRELWEAIEAGDFPE 307
Subject = d1tqna_ a.104.1.1 Mammalian cytochrome P450 3a4
length=457 filtered_length=456 Neff=14.779
Smith-Waterman score = 42 Evalue = 4.92e+01
QUERY 46 KKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYE 91
CONSENSUS_1 46 EKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWE 91
+K+++ + ++ +++++ ++++++ L+ + K++ +KG++ ++++
CONSENSUS_2 208 LKVIKEHKETLDKNNPRKRNDFIDLLLDLKEK~~~~EKGEDGSELT 249
d1tqna_ 223 RKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS~~~~KETESHKALS 264
Subject = d1djxa3 c.1.18.1 Phospholipase C isozyme D1 (PLC-D1)
length=327 filtered_length=325 Neff=14.225
Smith-Waterman score = 41 Evalue = 5.00e+01
QUERY 6 LNRIGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDD 76
CONSENSUS_1 6 LNPIGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKK 76
++ ++ ++Y++ ++ ++ ++++ + Y++ +++E+ +K ++ ++++ + ++ K+ ++++Y KG +
CONSENSUS_2 191 AKELSDLVVYCKSVKFRGFEDALKENKSFYEISSLSETKALKLLKESGAELV===RHNKRFLSRVYPKGTR 258
d1djxa3 191 VPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFV===RHNVSCLSRIYPAGWR 258
Subject = d1kcw_3 b.6.1.3 Ceruloplasmin
length=175 filtered_length=174 Neff=16.948
Smith-Waterman score = 40 Evalue = 5.09e+01
QUERY 13 VYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQD 75
CONSENSUS_1 13 EYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGK 75
+++++ ++++ + K+ +YT ++++ +++ +++++G+ ++++G ++++VK K
CONSENSUS_2 9 SVFLTRGPTRIGGKYKKVVFREYTDGTFTDGVERPAWLVNGGIPGPLIRAEVGDTVRVTVKNK 71
d1kcw_3 41 AVFFEQGTTRIGGSYKKLVYREYTDASFTNRKERGPEEEHLGILGPVIWAEVGDTIRVTFHNK 103
Subject = d1hr6b2 d.185.1.1 Mitochondrial processing peptidase (MPP)
length=207 filtered_length=206 Neff=18.112
Smith-Waterman score = 41 Evalue = 5.14e+01
QUERY 42 EDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 42 EDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
E+ K++ ++ ++ E + L ++ + L+++G++ ++++ +E+V++ED+ + A++ L
CONSENSUS_2 119 ERAKNQLLASLLLSLESPSGLASRLGRLLLYGGDPD~~~~YLEELLERIEAVTAEDVKRVAKKYL 179
d1hr6b2 129 NRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRL~~~~SPEEVFEQVDKITKDDIIMWANYRL 189
Subject = d1fm4a_ d.129.3.1 Major tree pollen allergen
length=159 filtered_length=153 Neff=15.497
Smith-Waterman score = 39 Evalue = 5.16e+01
QUERY 26 KVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 26 GEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
++++++ ++ +L ++D+++ + ++++ G +L++ + A LK+ KG++G ++ + + ++E V +++P++ L+++
CONSENSUS_2 60 DGGPAKTVKERLEALDDENRSLSYSIIEGDVLLEPLKSYSATLKVVPKGDGG~~~~CVVKWTIEFETVGDDEPPEEELKAG 136
d1fm4a_ 60 EGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPDGG~~~~CVLKISNKYHTKGNHEVKAEQVKAS 136
Subject = d1j8ca_ d.15.1.1 Ubiquitin-like N-terminal domain of PLIC-2
length=71 filtered_length=71 Neff=10.451
Smith-Waterman score = 35 Evalue = 5.26e+01
QUERY 68 LRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFTI 108
CONSENSUS_1 68 LKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLEV 108
++++VK +G + EV++ + + E++ +K+++K ++
CONSENSUS_2 1 MQIFVKTLTG~~~~KITLEVEPSDTI==ENVKAKIQDKEGI 35
d1j8ca_ 33 IKVTVKTPKE~~~~KEEFAVPENSSV==QQFKEAISKRFKS 67
Subject = d1uaia_ b.29.1.18 Polyguluronate lyase
length=223 filtered_length=220 Neff=11.255
Smith-Waterman score = 39 Evalue = 5.27e+01
QUERY 8 RIGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDED 43
CONSENSUS_1 8 PIGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDED 43
+++G++++V I+G+ K++ + +++G+ ++ +Y++D
CONSENSUS_2 162 NVSGGTLTVTINGELKLDISWAGDGFYFKAGVYNQD 197
d1uaia_ 162 VVSGGKIKVYYNGVLQTTISHTSSGNYFKAGAYTQA 197
Subject = d1cmba_ a.43.1.5 Met repressor, MetJ (MetR)
length=104 filtered_length=102 Neff=2.941
Smith-Waterman score = 36 Evalue = 5.29e+01
QUERY 15 YMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFT 107
CONSENSUS_1 15 YVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLE 107
Y++ +++++ +++ ++ +LK+ +++ ++++V + + + +L +A+L + G + + + + + ++IP++A+++LE
CONSENSUS_2 11 YAEHGKKSEQVKKITVSIPLKVLKVLTDERTRRQV==NNLRHATNSELLCEAFLHAFT====G~~~~QPLPDDDDLRKDRPDGIPAEAKLLLE 93
d1cmba_ 11 YAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQV==NNLRHATNSELLCEAFLHAFT====G~~~~QPLPDDADLRKERSDEIPEAAKEIMR 93
Subject = d1u5ua_ e.5.1.2 Allene oxide synthase-lipoxygenase protein,
length=347 filtered_length=338 Neff=12.432
Smith-Waterman score = 40 Evalue = 5.82e+01
QUERY 10 GKDVYYMQIK===GEGTIEKVDGRNLRN~~~YTLPAYDEDGVKKQITFRSTKKENDHKLNKYAF===LRLYVDQDDNskneISSIEVKSYEEI=QKADLP 99
CONSENSUS_1 10 GGDEYYVQIT===GDGKKKGEKGDGGYS~~~YTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAY===LKLYVKGKKG....IKGIEVTSWEEV=KKEDIP 99
+G+ +YV+++ + G+K+ + ++ +++ + ++ DE K + + + ++++L +++++G+Y L++ V + + +++ ++ + +V +++D+P
CONSENSUS_2 183 DGKAVYVKFHFKPDQGVKNLTDEEAKLV...GAGVVADEAAKLAGKDPDFLRRDLYEAIEAGDYKWDLYVQVMEEAD~~~~KFDFDPFDLTKVWPEDDFP 278
d1u5ua_ 202 DGKVRYCRYRALPGDVDIKEEDESGRLTeeeQRKIWIFSRHENEKRPDDYLRKEYVERLQKGPVNYRLQIQIHEASP~~~~DDTATIFHAGILWDKETHP 297
QUERY 100 EKVKDKFTI 108
CONSENSUS_1 100 KKALEKLEV 108
KL +
CONSENSUS_2 279 LIPVGKLVL 287
d1u5ua_ 298 WFDLAKVSI 306
Subject = d1m22a_ c.117.1.1 Peptide amidase Pam
length=452 filtered_length=450 Neff=16.573
Smith-Waterman score = 42 Evalue = 5.95e+01
QUERY 12 DVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFTI 108
CONSENSUS_1 12 DEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLEV 108
++YYV + +++++ ++ +G+++ + ++E + +E+ +++++++++++++ L ++++++ +K+++V+++ + ++ ++A+E+++V
CONSENSUS_2 278 AAYYVLLLAEAASNLARYLGVRYGPRASLAELVALLELYAKSRAEGFGPEVLGRILLGAGLSAADY~~~~LKALKVRRLLARRLGLDFAAAFEDVDV 370
d1m22a_ 316 EAERTLLLYEFKAGLERYFNTHRAPLRSLADLIAFNQAHSKQELGLFGQELLVEADATAGLADPAY~~~~IRARSDARRLAGPEGIDAALAAHQLDA 408
Subject = d1ppjb2 d.185.1.1 Cytochrome bc1 core subunit 2
length=191 filtered_length=191 Neff=18.026
Smith-Waterman score = 40 Evalue = 6.35e+01
QUERY 42 EDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFT 107
CONSENSUS_1 42 EDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLE 107
E+ K++ ++ ++ E L ++ + L++ G++ +++++ +++V++ED+ + A++ L+
CONSENSUS_2 110 ERAKNQLKGSLLLSLESPSGLAERLGRLLLYGGDLD~~~~PLEELLERIDAVTLEDVKRVAKKYLS 171
d1ppjb2 123 QAAKNKLKAGYLMSVESSEGFLDEVGSQALAAGSYT~~~~PPSTVLQQIDAVADADVINAAKKFVS 184
Subject = d1ddf__ a.77.1.2 Fas
length=127 filtered_length=115 Neff=15.139
Smith-Waterman score = 37 Evalue = 6.44e+01
QUERY 45 VKKQITFRSTKKENDHKLNKYAFLRLYVD==QDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 45 KEKEVTFTAGKKELDHNLRKGAYLKLYVK==GKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
+E+E++ ++ ++D + ++ ++L+ ++ GK++ + ++ ++++++++++D+ +K++++L
CONSENSUS_2 39 SEAEIDRIEHENPRDLKEQIYQLLRKWKQREGKDA~~~~TVETLLKALRKIGLRDLAEKIEDLL 98
d1ddf__ 39 NEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKE~~~~AYDTLIKDLKKANLCTLAEKIQTII 98
Subject = d1qpxa1 b.1.11.1 Pilus chaperone PapD, N-domain
length=124 filtered_length=123 Neff=13.943
Smith-Waterman score = 37 Evalue = 6.45e+01
QUERY 41 DEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDK 105
CONSENSUS_1 41 DEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEK 105
++++K+++V F+++ + +++ L+++++G+ + + ++ +S + ++IP+K ++
CONSENSUS_2 40 GDGDKTPDVPFVVTPPLFRLEPGSEQLLRIIRTGGAA~~~~PLPADRESLFWLNVLEIPPKPKDG 100
d1qpxa1 40 ENQEKIITGPVIATPPVQRLDPGAKSMVRLSTTPDIS~~~~KLPQDRESLFYFNLREIPPRSEKA 100
Subject = d1wida_ b.142.1.2 DNA-binding protein RAV1
length=117 filtered_length=115 Neff=15.217
Smith-Waterman score = 37 Evalue = 6.48e+01
QUERY 18 IKGEGTIEKVDGRNLRNYTLP=AYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneIS 83
CONSENSUS_1 18 ITGDGKKKGEKGDGGYSYTLK=GYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IK 83
++++G++ + ++++G +++++ Y ++++ ++T ++ ++D++L+ G ++ ++ ++++G ++
CONSENSUS_2 40 ADKKGVELVLEDLHGKVWKFRYVYRGSSRRYVLTGGWSDFVKDNGLKAGDVCVFELDKGEG~~~~GE 102
d1wida_ 40 VSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQD~~~~QQ 102
Subject = d1qw9a1 b.71.1.2 Alpha-l-arabinofuranosidase
length=131 filtered_length=127 Neff=13.669
Smith-Waterman score = 37 Evalue = 6.61e+01
QUERY 10 GKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITF==RSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFT 107
CONSENSUS_1 10 GGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTF==TAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLE 107
+G+ + ++++++ +++ GD Y + ++DEDG+E +++ ++++++D +L+ +++ +V +++ ++G +++++ ++ E++ + ++++
CONSENSUS_2 14 RGTLLPLTLSSPTYDTEDFGDVPYLDASASKDEDGGELIIKVVNLDPTEAVDLDLDLRGLGAASVAEGTV~~~~LTGDDLKAENTFEPEKVVPVETSDAK 109
d1qw9a1 14 XGVALHPVISSPKYDSKDFTDVPYLESIAVYNEEKEEVTIFAVNRDMEDALLLECDVRSFEDYRVIEHIV~~~~LEHDNVKQTNSAQSSPVVPHRNGDAQ 109
QUERY 108 I 108
CONSENSUS_1 108 V 108
+
CONSENSUS_2 110 L 110
d1qw9a1 110 L 110
Subject = d1vpma_ d.38.1.1 Acyl-CoA hydrolase BH0798
length=133 filtered_length=132 Neff=17.038
Smith-Waterman score = 38 Evalue = 6.78e+01
QUERY 13 VYYMQIKGEGTIEKVDGR=NLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDN 77
CONSENSUS_1 13 EYYVQITGDGKKKGEKGD=GGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG 77
E+ V++ ++ ++GE+ ++T+ + DEDGK ++V + E +++L ++A + + +++
CONSENSUS_2 66 EVEVEVEAEDLRTGERRLVATALFTFVALDEDGKPVPVPPLVPETEEEKRLYEEALRRRELRLERR 131
d1vpma_ 88 EVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRA 153
Subject = d1svma_ c.37.1.20 Papillomavirus large T antigen helicase d
length=362 filtered_length=353 Neff=14.082
Smith-Waterman score = 40 Evalue = 6.95e+01
QUERY 35 YTLPAYDEDGVKKQITFRSTKKENDHKLNKY=AFLRLYVDQDDNskneISSIEVKSYEEIQKADL 98
CONSENSUS_1 35 YTLKGYDEDGKEKEVTFTAGKKELDHNLRKG=AYLKLYVKGKKG....IKGIEVTSWEEVKKEDI 98
+T+ + + ++++++++ ++KE+ ++++++ + L+L+ ++++ ++ +++ + + +D+
CONSENSUS_2 76 ATMVRHYKRAEMVQLSMLEWIKERFKKILEEARKLLLSTNEGDT~~~~GDWKAGVKFLKFELVDL 136
d1svma_ 76 VDTVLAKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADI~~~~EEWMAGVAWLHCLLPKM 136
Subject = d1wj9a2 d.58.53.1 Hypothetical protein TTHB192
length=124 filtered_length=123 Neff=10.496
Smith-Waterman score = 36 Evalue = 7.05e+01
QUERY 18 IKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVK 88
CONSENSUS_1 18 ITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVT 88
++++G+ ++++G G + L + ++G++ +++ ++ + + +++ ++YL+++ K++ ++G+ +T
CONSENSUS_2 17 VRRLGRNGKRVGLLGEAEQLAWLARKGERHGFELLEAEAGPAVLILADGYLQVRRRKKGR~~~~KGGRRIT 83
d1wj9a2 17 AKRLAATGKRVALKTPAEKVAWLERRLEEGGFRLLEGERGPWVQILQDTFLEVRRKKDGE~~~~EAGKLLQ 83
Subject = d1q8ya_ d.144.1.7 Sky1p
length=333 filtered_length=320 Neff=11.631
Smith-Waterman score = 39 Evalue = 7.10e+01
QUERY 46 KKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPE 100
CONSENSUS_1 46 EKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPK 100
EK ++F+++K+ ++ +++YL+ +++ ++ + +E ++++ +++++ +
CONSENSUS_2 280 EKMLVFDPDKRITAEEALAHPYLAGLHDPSDE~~~~PVADEPFDFSFEDLDELKE 330
d1q8ya_ 309 SPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI~~~~RVPDRELYGSGSDIPGWFE 359
Subject = d1v9ya_ d.110.3.2 Direct oxygen sensor protein, DOS
length=96 filtered_length=96 Neff=19.458
Smith-Waterman score = 37 Evalue = 7.35e+01
QUERY 24 IEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHK 61
CONSENSUS_1 24 KKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHN 61
++G++ +GG++++L G+++DG++ V++++++ +++++
CONSENSUS_2 50 AGGRARLGGWRGELRGRRKDGSLFWVELSISPVRDEGG 87
d1v9ya_ 67 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK 104
Subject = d1tig__ d.68.1.1 Translation initiation factor IF3, C-termi
length=88 filtered_length=87 Neff=12.437
Smith-Waterman score = 35 Evalue = 7.44e+01
QUERY 47 KQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 47 KEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
KE++++ +++E D ++++++ +K +G+K ++ + E+ ++ +++L+++
CONSENSUS_2 4 KEIKLRPKIDEHDLEVKLKQARKFLEDGDKV~~~~KVTLRFRG=REIAHPELGLELLDRV 58
d1tig__ 4 KEVRLSPTIEEHDFNTKLRNARKFLEKGDKV~~~~KATIRFKG=RAITHKEIGQRVLDRL 58
Subject = d1khba1 c.91.1.1 Cytosolic phosphoenolpyruvate carboxykinas
length=363 filtered_length=362 Neff=11.431
Smith-Waterman score = 39 Evalue = 7.47e+01
QUERY 33 RNYTLPAYDEDGVKKQITFRSTKKEND====HKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFTI 108
CONSENSUS_1 33 YSYTLKGYDEDGKEKEVTFTAGKKELD====HNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLEV 108
+ ++ + ++D++E+ + ++ ++++LD + + ++ ++++ ++ ++ + + + ++E ++D+P+++LE+LE+
CONSENSUS_2 280 WILDRVEGEADAVETPIGLLPKYEDLDLEGLDKEDLEELFSVDKEEWLE~~~~ELELIEEYFFEKLGDDLPAELLEELEA 355
d1khba1 280 WMFNRIDGKASTKLTPIGYIPKEDALNLKGLGHINMMELFSISKEFWDK~~~~EVEDIEKYLVDQVNADLPCEIEREILA 355
Subject = d1gr0a1 c.2.1.3 Myo-inositol 1-phosphate synthase
length=244 filtered_length=231 Neff=11.485
Smith-Waterman score = 38 Evalue = 7.66e+01
QUERY 46 KKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFTI 108
CONSENSUS_1 46 EKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLEV 108
+++V ++ +++ +++++ + + ++++KG + ++G+ + + E++ K+ + +K ++++++
CONSENSUS_2 59 ARKVGKDLAEAIFRAPNLTIPLPDVPLKGVIV~~~~RRGPVLDGLEKLRKDIREFKEANAVDI 117
d1gr0a1 59 AKKVGFDLSDAIFASENNTIKIADVAPTNVIV~~~~QRGPTLDGIGKYYADTIELSDAEPVDV 117
Subject = d1ogya1 b.52.2.2 Periplasmic nitrate reductase alpha chain,
length=76 filtered_length=75 Neff=14.813
Smith-Waterman score = 35 Evalue = 7.74e+01
QUERY 58 NDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADL 98
CONSENSUS_1 58 LDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDI 98
+++ +++G++++++ + + + ++++ ++V+++ +
CONSENSUS_2 3 AKLGIKDGDLVRVSSRRGEV~~~~VARVKARVTDRVRPGVV 39
d1ogya1 47 RSRGLNRGSEVRVISRRGEI~~~~RTRLETRGRNRMPRGVV 83
Subject = d1kzla2 b.43.4.3 Riboflavin synthase
length=110 filtered_length=108 Neff=14.593
Smith-Waterman score = 36 Evalue = 7.82e+01
QUERY 36 TLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRL 70
CONSENSUS_1 36 TLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKL 70
T+ +++++G+ +++T++++++EL + L++++++ +
CONSENSUS_2 16 TILSIEKLGGSLRLTIELPDAELLKYLVLKGSIAV 50
d1kzla2 16 EIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIAL 50
Subject = d1pn5a1 a.77.1.5 NALP1
length=93 filtered_length=91 Neff=12.615
Smith-Waterman score = 35 Evalue = 7.83e+01
QUERY 68 LRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFT 107
CONSENSUS_1 68 LKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLE 107
L + + G + + ++ ++ +E+++++D+ ++++++++
CONSENSUS_2 56 LLVEHYGEER~~~~AWDVTLKILEKINLNDLAERLKKEIG 91
d1pn5a1 56 YLVAQYGEQR~~~~AWDLALHTWEQMGLRSLCAQAQEGAG 91
Subject = d1dar_2 c.37.1.8 Elongation factor G (EF-G), N-terminal (G)
length=249 filtered_length=249 Neff=11.157
Smith-Waterman score = 38 Evalue = 7.90e+01
QUERY 31 NLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 31 GGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
++++ ++ +D+D EK + ++ LD+ ++++ L + + ++ + +++ + EE+++E++ + +++++
CONSENSUS_2 146 DLLKMKALLFDGDLGEKVEEVDIPADLLDLAEELREELLEALAELDD~~~~ELLEKYLEGEELTEEELKAALRKAT 217
d1dar_2 179 DVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDE~~~~NIMLKYLEGEEPTEEELVAAIRKGT 250
Subject = d1gy8a_ c.2.1.2 Uridine diphosphogalactose-4-epimerase (UDP
length=347 filtered_length=342 Neff=12.702
Smith-Waterman score = 39 Evalue = 8.05e+01
QUERY 49 ITFRSTKKENDHKL~~~~~NKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFT 107
CONSENSUS_1 49 VTFTAGKKELDHNL~~~~~RKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLE 107
+ + A+ ++ +++ +++ L+++ ++ + + G+ V ++ + +D+ + ++ LE
CONSENSUS_2 194 LPALAQVAVGRRPH.....LEREKLSVFGDDYPT~~~~PDGTGVRDY==IHVVDLADAHVLALE 251
d1gy8a_ 230 GRVMSDIAPDQRLTihedaSTDKRMPIFGTDYPT~~~~PDGTCVRDY==VHVCDLASAHILALD 287
Subject = d1oaoc_ e.26.1.3 Bifunctional carbon monoxide dehydrogenase
length=729 filtered_length=607 Neff=9.558
Smith-Waterman score = 39 Evalue = 8.06e+01
QUERY 17 QIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLR~LYVDQDDNskneISSIEVKSYEEIQKADL 98
CONSENSUS_1 17 QITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLK~LYVKGKKG....IKGIEVTSWEEVKKEDI 98
++++ +++ +++ +++ ++ G + + +E + + G + ++++RK+ + L +++ G ++ + V++ +E++ +++
CONSENSUS_2 288 LVRKLLTEDLKDLLVWKVLEVRGGKVVVEEIDIPVDFGPAFEGERIRKDDLYV.LGGPKTPG~~~~FELVLVKDMDEIEDGKV 366
d1oaoc_ 288 IPDWFFSVEDYDKIVQIAMETRGIKLTKIKLDLPINFGPAFEGESIRKGDMYVeMGGNRTPA~~~~FELVRTVSESEITDGKI 366
Subject = d1xpna_ b.3.7.1 Hypothetical protein PA1324
length=159 filtered_length=142 Neff=4.535
Smith-Waterman score = 36 Evalue = 8.08e+01
QUERY 5 SLNRIGKDVYYMQ==IKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFR 52
CONSENSUS_1 5 QLNPIGGDEYYVQ==ITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFT 52
++ + ++YYV ++ + ++G+ + +G + ++G+ K+V++T
CONSENSUS_2 109 EFRDLPDGTYYVTGSFVWTASSDGSYSPQGGLLLKRVTLKGGETKKVLLT 158
d1xpna_ 120 DFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLT 169
Subject = d1j0ma2 b.24.1.1 Xanthan lyase
length=118 filtered_length=115 Neff=7.096
Smith-Waterman score = 35 Evalue = 8.10e+01
QUERY 12 DVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFR 52
CONSENSUS_1 12 DEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFT 52
+ + + +++D ++++++ ++G ++T++ + +G+ K+++++
CONSENSUS_2 76 GKAATVVSADPGVSVLDLANGITLTVNTAGLAGASKKIKLK 116
d1j0ma2 76 ARSAEGYSADPGITVTQLAPTIKFTVNVNGAKGKSFHASFQ 116
Subject = d1vpba_ d.283.1.1 Putative modulator of DNA gyrase BT3649
length=424 filtered_length=423 Neff=17.355
Smith-Waterman score = 41 Evalue = 8.19e+01
QUERY 42 EDGVKKQITFRSTK=KENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQK 95
CONSENSUS_1 42 EDGKEKEVTFTAGK=KELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKK 95
E+++++ V+++ G+ +++++ ++G ++++V+G+ G + ++ +S E+++K
CONSENSUS_2 15 ERSRSLSVRVRNGEVETVSSSRDRGVGVRVIVGGRVG~~~~FASTSDLSEEALEK 65
d1vpba_ 30 YSSSNTSFELRDAKMDRLQQASEGGLSLSLYVDGRYG~~~~SISTNRLNRKELET 80
Subject = d1qmha1 c.47.2.1 RNA 3'-terminal phosphate cyclase, RPTC, i
length=95 filtered_length=94 Neff=12.957
Smith-Waterman score = 35 Evalue = 8.23e+01
QUERY 55 KKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 55 KKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
+++L++++ G + L+++ ++G + G+ + V+ ED+ ++A E+L
CONSENSUS_2 40 VRGLRSGKGPGSGILLVAETENG~~~~CLGFSALGERGVPAEDVGREAAEEL 87
d1qmha1 40 IHNLPRDQGPGNTVSLEVESENI~~~~TERFFVVGEKRVSAEVVAAQLVKEV 87
Subject = d1i8da2 b.43.4.3 Riboflavin synthase
length=113 filtered_length=112 Neff=14.518
Smith-Waterman score = 36 Evalue = 8.25e+01
QUERY 36 TLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRL 70
CONSENSUS_1 36 TLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKL 70
++ ++++G+ +++T++++++EL + L++G+++ +
CONSENSUS_2 15 EIVSIEKLGNSLRLTIELPDAELLKYLVLGGSIAV 49
d1i8da2 15 EVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGI 49
Subject = d1daba_ b.80.1.7 Virulence factor P.69 pertactin
length=539 filtered_length=537 Neff=20.816
Smith-Waterman score = 43 Evalue = 8.49e+01
QUERY 25 EKVDGRNLRNYTLPAYDEDGVKKQITFRSTKK 56
CONSENSUS_1 25 KGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKK 56
+G+ + G+++YTL + + +G+ + +T++++
CONSENSUS_2 510 GGTVTAGAGTYTL=TAGGNGN===WYLTSTLA 537
d1daba_ 510 DGKVDIGTYRYRL=AANGNGQ===WSLVGAKA 537
Subject = d1ubkl_ e.18.1.1 Nickel-iron hydrogenase, large subunit
length=508 filtered_length=508 Neff=16.854
Smith-Waterman score = 41 Evalue = 8.56e+01
QUERY 5 SLNRIGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKV 102
CONSENSUS_1 5 QLNPIGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKA 102
+L+P+ D ++ ++ + K++++ + + T++ Y++ +++++++++ + + +++ ++ G +++L V+ ++G +++++ + E + ++P +A
CONSENSUS_2 282 DLPPGDPDKIREFVAHSFYKDLDELHPWDGETEPFYKRLDGVGKYSWVKAPRYGGGPVEVGPLARLLVGVAWG~~~~LPLAQPYLGEFLLDFGVPVGA 375
d1ubkl_ 308 NIKPFDKMQIEEHVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPRYMGEPMETGPLAQVLIAYSQG~~~~HPKVKAVTDAVLAKLGVGPEA 401
Subject = d1fnoa3 d.58.19.1 Peptidase T (tripeptidase)
length=113 filtered_length=113 Neff=10.106
Smith-Waterman score = 35 Evalue = 8.62e+01
QUERY 25 EKVDGRNLRNYTLPAYDEDG=VKKQITFRSTKKENDHKLNKYAFLRLYVDQDD 76
CONSENSUS_1 25 KGEKGDGGYSYTLKGYDEDG=KEKEVTFTAGKKELDHNLRKGAYLKLYVKGKK 76
+G+ + +Y + +D++G ++++ +++ ++L+++L ++ ++L +K+++
CONSENSUS_2 60 TGNVEKAELKYIIRDFDREGFEARKALLKEIVDKLNAKLGPEGRVELELKDQY 112
d1fnoa3 60 KGTVDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSY 112
Subject = d1t2wa_ b.100.1.1 Sortase A
length=145 filtered_length=143 Neff=15.063
Smith-Waterman score = 37 Evalue = 8.74e+01
QUERY 60 HKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPE 100
CONSENSUS_1 60 HNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPK 100
++L+KG ++++++G++ + +VTS E V+++D+++
CONSENSUS_2 73 DKLKKGDKIYVTDAGGTY~~~~VY==RVTSIEVVDPDDVDV 107
d1t2wa_ 73 KAAKKGSMVYFKVGNETR~~~~KY==KMTSIRDVKPTDVGV 107
Subject = d1s4ka_ a.35.1.6 Putative cytoplasmic protein YdiL
length=120 filtered_length=112 Neff=3.125
Smith-Waterman score = 35 Evalue = 8.80e+01
QUERY 60 HKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKAD==LPEKVKDKF 106
CONSENSUS_1 60 HNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKED==IPKKALEKL 106
+ LRK +L + ++ + G++ +W++ +K+D IP ++++L
CONSENSUS_2 9 QALRKILFLDIEEAADYI~~~~GGGVDSETWQRWEKGDLAIPDEVIAEL 53
d1s4ka_ 9 QALRRIFDMTIEECTIYI~~~~TQDNNSATWQRWEAGDIPISPEIIARL 53
Subject = d1ll8a_ d.110.3.5 N-terminal PAS domain of Pas kinase
length=114 filtered_length=113 Neff=19.035
Smith-Waterman score = 37 Evalue = 9.00e+01
QUERY 24 IEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHK 61
CONSENSUS_1 24 KKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHN 61
++G++++ G++++L +++DG+ V++++++ ++D++
CONSENSUS_2 65 AAGGGRGLGFEGELRLRRKDGSLFPVELSISPLRDDGG 102
d1ll8a_ 65 EADGHAAVVFGTVVDIISRSGEKIPVSVWMKRMRQERR 102
Subject = d1njha_ b.128.1.1 Hypothetical protein YojF
length=118 filtered_length=116 Neff=3.638
Smith-Waterman score = 35 Evalue = 9.07e+01
QUERY 6 LNRIGKDVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEI 93
CONSENSUS_1 6 LNPIGGDEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEV 93
L+ + ++ +Y+++ ++ + ++ D+G+ ++ ++ + K VT++ GK ++D + R G L+L + G + EV+ ++
CONSENSUS_2 15 LDRFANKPVYLHLETTNGAYASHFDEGF=FSAGAFIRNAK===VTYERGKITGDGPYRVGLKLGLGWVYAEG~~~~LTHFEVDEKGRL 94
d1njha_ 15 LERYADRPVYIHLETTTGSYSAHLNEKN=MTVVAYIRNAK===VTYHQAKIKGNGPYRVGLKTEEGWIYAEG~~~~LTEYTVDEENRL 94
Subject = d1rqpa1 b.141.1.1 5'-fluoro-5'-deoxyadenosine synthase
length=106 filtered_length=104 Neff=12.904
Smith-Waterman score = 35 Evalue = 9.14e+01
QUERY 58 NDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKAD 97
CONSENSUS_1 58 LDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKED 97
++ L+ G L++ ++G+++ ++ + V+++++V++++
CONSENSUS_2 34 AELGLGLGDKLEVRIGGVYE~~~~LRLPFVRTFGDVAPIG 69
d1rqpa1 34 EKAGIGYGARLRLTLDGVLP~~~~FEAPLTPTFADAGEIG 69
Subject = d1q25a1 b.64.1.1 Cation-independent mannose-6-phosphate rec
length=123 filtered_length=120 Neff=14.600
Smith-Waterman score = 36 Evalue = 9.22e+01
QUERY 42 EDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKS 89
CONSENSUS_1 42 EDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTS 89
E+G++ ++++++G++ +++N R+ + + ++ +++ G ++ + ++
CONSENSUS_2 60 ERGGKLLLSYSNGDPCPNGNHRYSTVITFVCDRTAG~~~~TPVFIEED 103
d1q25a1 60 KTASRSLLEFNTTVNCKQQNHKIQSSITFLCGKTLG~~~~TPEFVTAT 103
Subject = d1kb9a2 d.185.1.1 Cytochrome bc1 core subunit 1
length=205 filtered_length=203 Neff=18.197
Smith-Waterman score = 39 Evalue = 9.27e+01
QUERY 70 LYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 70 LYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
L++ G++ ++++++ +++V++ED+ + A++ L
CONSENSUS_2 142 LLLGGDLD~~~~PLEELLERIDAVTAEDVKRVAKKYL 174
d1kb9a2 155 VLIKGSKL~~~~SLGEAFKKIDAITVKDVKAWAGKRL 187
Subject = d2pvaa_ d.153.1.3 Penicillin V acylase
length=342 filtered_length=339 Neff=14.478
Smith-Waterman score = 39 Evalue = 9.38e+01
QUERY 40 YDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKFTI 108
CONSENSUS_1 40 YDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKLEV 108
+D++G+ ++++ G+ +++++ + L + +++ +++ ++ ++ E+ + K L +L++
CONSENSUS_2 157 SDKSGDSAVIEPINGGL====KIYDNPVGVLTNSPDFD~~~~WHLTNLNNYLNLSPETPKPKTLGGLDL 217
d2pvaa_ 157 TDASGESIVIEPDKTGI====TIHRKTIGVMTNSPGYE~~~~WHQTNLRAYIGVTPNPPQDIMMGDLDL 217
Subject = d2cuaa_ b.6.1.2 Cytochrome c oxidase
length=118 filtered_length=117 Neff=3.060
Smith-Waterman score = 35 Evalue = 9.41e+01
QUERY 33 RNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKV 102
CONSENSUS_1 33 YSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKA 102
Y+Y+ + + + ++ F+ + + L ++A ++++V++ + I + +V +++ VK + P ++
CONSENSUS_2 18 YEYSDFLGPLEFDSYMLGFRLLDVDNRIVLPLNAQIRILVTAADV~~~~IHSWTVPALG=VKVDGTPGRL 82
d2cuaa_ 22 AQAVVQTGPNQYTVYVLAFAFGYQPNPIEVPQGAEIVFKITSPDV~~~~IHGFHVEGTN=INVEVLPGEV 86
Subject = d1g6oa_ c.37.1.11 Hexameric traffic ATPase, HP0525
length=306 filtered_length=305 Neff=12.167
Smith-Waterman score = 38 Evalue = 9.71e+01
QUERY 16 MQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDD 76
CONSENSUS_1 16 VQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKK 76
++I+++ ++ + DG + + + + +++ ++++ A++ +++L++++ ++L+V+G++
CONSENSUS_2 26 IHIEPYELVVRFRIDGVLHEVAVLPLAAALVSRLKILARLDIAEKRLPQDGRISLLVDGRL 86
d1g6oa_ 43 ICYNGNKVVWVLKNNGEWQPFDVRDRKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNL 103
Subject = d1eo9a_ b.3.6.1 Protocatechuate-3,4-dioxygenase, alpha chai
length=202 filtered_length=198 Neff=15.909
Smith-Waterman score = 38 Evalue = 9.77e+01
QUERY 14 YYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLYVDQDDNskneISSIEVKSYEE 92
CONSENSUS_1 14 YYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLYVKGKKG....IKGIEVTSWEE 92
+YV+ + + ++++ D+ + +L++ +++G+ + ++++ + +D + GA++ + ++ G + +++ S+++
CONSENSUS_2 13 FYVAGAPLLAGGAGLVDSDLRRDLVTEGAPGE==PLLLEGRVLDGDGKPVPGALVEIWQADADG~~~~RYSGQDDSRGA 85
d1eo9a_ 13 YVHIGLLPKQANIEVFEHNLDNNLVQDNTQGQ==RIRLEGQVFDGLSLPLRDVLIEIWQADTNG~~~~VYPSQADTQGK 85
Subject = d1a3qa2 b.2.5.3 p52 subunit of NF-kappa B (NFKB), N-termina
length=184 filtered_length=183 Neff=8.481
Smith-Waterman score = 36 Evalue = 9.88e+01
QUERY 60 HKLNKYAFLRLYVDQDDNskneISSIEVKSYEEIQKADLPEKVKDKF 106
CONSENSUS_1 60 HNLRKGAYLKLYVKGKKG....IKGIEVTSWEEVKKEDIPKKALEKL 106
++ ++ ++ +++V++++ + + + ++ VKK+++ ++++++L
CONSENSUS_2 76 KDCEDKGVCTVEVGPEDM~~~~VASFPNLGIQCVKKKEVEEALKKRL 118
d1a3qa2 76 KQCSELGICAVSVGPKDM~~~~TAQFNNLGVLHVTKKNMMGTMIQKL 118
Subject = d1ds1a_ b.82.2.2 Clavaminate synthase
length=323 filtered_length=313 Neff=18.361
Smith-Waterman score = 40 Evalue = 9.97e+01
QUERY 12 DVYYMQIKGEGTIEKVDGRNLRNYTLPAYDEDGVKKQITFRSTKKENDHKLNKYAFLRLY 71
CONSENSUS_1 12 DEYYVQITGDGKKKGEKGDGGYSYTLKGYDEDGKEKEVTFTAGKKELDHNLRKGAYLKLY 71
++ ++++ +G+++G++++ ++++ L+ + D+++K + F+ G ++ +++ ++A+ +L+
CONSENSUS_2 192 EGLRAVHSVPGSFGGGGERPRVVHPLVRLHPDTGRKLLRFNPGFVGPITEESRAALDELL 251
d1ds1a_ 192 LDRRMPCCVDVAFRGGVDDPGAIAQVKPLYGDADDPFLGYDRELLAPEDPADKEAVAALS 251
Parameters:
E-value cutoff: 1.000e+02
Maximal number of hits to display: 300
Lambda_ungapped: 3.1760e-01
Expected value of positional scores: -5.2090e-01
Gap opening: 10
Gap extension: 1
This page was generated on August 31, 2008 06:14 PM