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The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Each neighbour has links to pairwise structural alignment with the query structure, to pre-computed structural neighbours in the Dali Database,
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Summary
No: Chain Z rmsd lali nres %id PDB Description
1: 1wu7-A 35.0 2.6 407 424 24 PDB MOLECULE: HISTIDYL-TRNA SYNTHETASE;
Pairwise Structural Alignments
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
No 1: Query=mol1A Sbjct=1wu7A Z-score=35.0
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DSSP LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLEELLLLLEEEHHHHhHHHL---- Query KINFSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLqAKGN---- 56 ident || | | | | | || | | | | Sbjct RLQIEKIRGFRDFYPEDXDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLY-RIKSgeel 59 DSSP LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLEELLLLLEEELHHH-HLLLlllh DSSP LLLLLLLLLL-lLLEEELLLLHHHHHHHHHHHhHHLLLLEEEEELLEEELLL------LL Query QNIIYGLEPI-lEARALKFDQTVPLAAYIARHlNDLTFPFARYQXDVVFRGE------FR 109 ident | | | || | | | | | | Sbjct LQQTYSFVDKggREVTLIPEATPSTVRXVTSR-KDLQRPLRWYSFPKVWRYEepqagrYR 118 DSSP HHHLLEEELLllLEEEELLLLHHHHHHHHLLL-LLLLLLEEEEELLEEELLLllllllLL DSSP EEEEEEEEEELllLLLHHHHHHHHHHHHHHHHHHLL-LLEEEEEEEHHHHHHHHHHLLLL Query QFRQCDIDVVGreKLSLLYDAQXPAIITEIFEAVNI-GDFVIRINNRKVLTGFFQSLNIS 168 ident | | | | || | | |||| || | Sbjct EHYQFNADIFG--SDSPEADAEVIALASSILDRLGLqDIYEIRINSRKIXEEIIGGXTSS 176 DSSP EEEEEEEEEEL--LLLHHHHHHHHHHHHHHHHHLLLlLLEEEEEEEHHHHHHHHHLLLLL DSSP HhhHHHHHHHHLLHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHLLLLlhhhHHHHHHHHH Query EtqIKSCISIIDNLEKIGEAKVKLELEKEGINPEQTQKIIDFVKIDGsvddVLDKLKHLS 228 ident | |||| || | || | | | Sbjct D--PFSVFSIIDRYHKISREEFVDQLRSAGIGEDGVSXIADLCSGTR----GIDEXARIT 230 DSSP L--HHHHHHHHHLLLLLLHHHHHHHHHHLLLLHHHHHHHHHHHHLLL----LHHHHHHHL DSSP HHllllhhhHHHHHHHHHHHHHHHHLLLLHhhEEELLLLLLLLLLEEEEEEEEEELLlHH Query QTlpeseqfNLGVSELETVITGVRNLGVPDkrFCIDLAIARGLNYYTGTVYETTLIGhEA 288 ident | || | | ||| |||| | | Sbjct GK------sSEEIARXAAVEDLLASYGVKN--VRYDFSIVRGLSYYTGIVFEAYDRS-GQ 281 DSSP LL------lLHHHHHHHHHHHHHHHLLLLL--LEELLLLLLLLLLLLLEEEEEEELL-LL DSSP HLLLLEEEEELLLLHHHLLLLLLEEEEEEEHHHHHHHHHhLLLLLLLLllLLLEEELLLL Query LGSICSGGRYEELVGTFIGEKXPGVGISIGLTRLISRLLkAGILNTLPptPAQVVVVNXQ 348 ident | |||| | || | || | | | Sbjct FRAILGGGRYDNLASLXSGESVPAVGFGXGDAVISLLLK-RENVQIPR-eKKSVYICRVG 339 DSSP LLLLLEEEELLLHHHHHHLLLLLEEEEEEEHHHHHHHHH-HLLLLLLL-lLLEEEEEEEL DSSP HHHHHHHHHHHHHHHHLLLLEEELLLLLLHHHHHHHHHHHLLLEEEELLHHHHHLLLLEE Query DELXPTYLKVSQQLRQAGLNVITNFEKRQLGKQFQAADKQGIRFCVIIGADEAAAQKSSL 408 ident | || | || | | | | | | || | Sbjct KINSSIXNEYSRKLRERGXNVTVEIXERGLSAQLKYASAIGADFAVIFGERDLERGVVTI 399 DSSP LLLHHHHHHHHHHHHLLLLEEEELLLLLLHHHHHHHHHHLLLLEEEEEEHHHHHLLEEEE DSSP EELLLLEEEELL-LLHHHHHHHLL- Query KDLQSGEQVEVA-ADLAEEIKRRL- 431 ident | | | | Sbjct RNXYTGSQENVGlDSVVEHLISQAt 424 DSSP EELLLLLEEEEEhHHHHHHHHHLLl