Results

Matches to full PDB Dali: mol1A,

Query: mol1A

Select neighbours (check boxes) for viewing as multiple structural alignment or 3D superimposition. The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious. Each neighbour has links to pairwise structural alignment with the query structure, to pre-computed structural neighbours in the Dali Database, and to the PDB format coordinate file where the neighbour is superimposed onto the query structure.

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Summary

    No:  Chain   Z    rmsd lali nres  %id PDB  Description
   1:  1i9y-A 39.8  1.4  274   336   30 PDB  MOLECULE: PHOSPHATIDYLINOSITOL PHOSPHATE PHOSPHATASE;                


Pairwise Structural Alignments

Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.

No 1: Query=mol1A Sbjct=1i9yA Z-score=39.8

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DSSP  ----------------------LEEEEEEEEELLLLLLLLLLLHHHHLLLleeellllll
Query ----------------------DMISVFIGTWNMGSVPPPKNVTSWFTSKglgktldevt   38
ident                            |    |            |              
Sbjct ydpiheyvnhelrkrenefsehKNVKIFVASYNLNGCSATTKLENWLFPE----------   50
DSSP  llhhhhhhhhhhlllhhhleeeEEEEEEEEEEELLLLLLLLLLHHHHLLL----------


DSSP  LLLLLLEEEEEELLLL-------LLHHHHHHHHHHHHHHHHL--LLLEEEEEEEELLEEE
Query VTIPHDIYVFGTQENS-------VGDREWLDLLRGGLKELTD--LDYRPIAMQSLWNIKV   89
ident  |   |||| | ||            |||       |         |       |     
Sbjct NTPLADIYVVGFQEIVqltsadpAKRREWESCVKRLLNGKCTsgPGYVQLRSGQLVGTAL  110
DSSP  LLLLLLEEEEEEELLLllllllhHHHHHHHHHHHHHHHHLLLllLLEEEEEEEEELLEEE


DSSP  EEEELHHHHHHEEEEEEEEEEL----LEEEEEEEEELLEEEEEEEEELLLLLLLHHHHHH
Query AVLVKPEHENRISHVSTSSVKT----KGAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQ  145
ident     |      |  |     ||    ||||   |    |   |   ||  |      |  
Sbjct MIFCKESCLPSIKNVEGTVKKTglgnKGAVAIRFDYEDTGLCFITSHLAAGYTNYDERDH  170
DSSP  EEEEEHHHHHHEEEEEEEEEELllllLEEEEEEEEELLEEEEEEEEELLLLLLLHHHHHH


DSSP  HHHHHHHHLLLlLLLLlLHHHlLLEEEEEEELLLLLLLLHHHHHHHHHLLLLHHHHLLLH
Query NYLDILRLLSLgDRQLnDISLrFTHLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQ  205
ident  |  |   |    |    |        |||| |||      |    |       |   ||
Sbjct DYRTIASGLRF-RRGR-SIFN-HDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQ  227
DSSP  HHHHHHHHLLL-HHHL-LLLL-LLEEEEEEELLLLLLLLHHHHHHHHHLLLHHHHHLLLH


DSSP  HHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLlLLLLLL-LLLLLLLEEEEEELllllLE
Query LNLEREKHKVFLRFSEEEISFPPTYRYERGSRdTYAWHK-TNVPSWCDRILWKSypetHI  264
ident ||      |||  |||  | |||||    |    |       || | ||||         
Sbjct LNKQMLTGKVFPFFSELPITFPPTYKFDIGTD-IYDTSDkHRVPAWTDRILYRG----EL  282
DSSP  HHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL-LLLLLLlLLLLLLLEEEEEEL----LL


DSSP  EEEEEEELLlLLLLLLLLEEEEEEEELLL--------------------------
Query ICNSYGCTDdIVTSDHSPVFGTFEVGVTS--------------------------  293
ident    ||        ||| |   | |                               
Sbjct VPHSYQSVP-LYYSDHRPIYATYEANIVKvdrekkkilfeelynqrkqevrdasq  336
DSSP  EEEEEEELL-LLLLLLLLEEEEEEEEEEEelhhhhhhhhhhhhhhhhhhhhhhll