Query T0515 putative carboxynorspermidine decarboxylase, Sinorhizobium meliloti, 365 residues
Match_columns 365
No_of_seqs 121 out of 2790
Neff 8.5
Searched_HMMs 15564
Date Fri May 21 18:04:49 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0515.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0515.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hkva2 c.1.6.1 (A:46-310) Dia 100.0 0 0 328.3 17.8 229 10-239 1-264 (265)
2 d1knwa2 c.1.6.1 (A:32-278) Dia 100.0 0 0 319.8 22.7 225 10-240 1-247 (247)
3 d7odca2 c.1.6.1 (A:44-283) Euk 100.0 0 0 313.0 22.6 222 10-239 1-240 (240)
4 d1twia2 c.1.6.1 (A:50-313) Dia 100.0 0 0 318.7 17.7 230 10-239 1-264 (264)
5 d1f3ta2 c.1.6.1 (A:44-283) Euk 100.0 0 0 311.9 22.7 222 10-239 1-240 (240)
6 d1twia1 b.49.2.3 (A:15-49,A:31 100.0 2.3E-33 1.5E-37 230.9 14.5 134 227-363 24-162 (170)
7 d1hkva1 b.49.2.3 (A:2-45,A:311 100.0 3.3E-34 2.1E-38 236.3 7.2 134 225-362 31-177 (181)
8 d1knwa1 b.49.2.3 (A:2-31,A:279 100.0 3.6E-32 2.3E-36 223.3 9.0 134 226-363 18-169 (174)
9 d1f3ta1 b.49.2.3 (A:14-43,A:28 100.0 2.2E-29 1.4E-33 205.4 7.8 134 219-354 12-166 (169)
10 d7odca1 b.49.2.3 (A:2-43,A:284 99.9 9.1E-26 5.8E-30 182.2 8.2 145 188-348 7-172 (177)
11 d1vfsa2 c.1.6.1 (A:13-249) Ala 99.4 2.6E-12 1.6E-16 95.9 11.6 176 10-197 1-195 (237)
12 d1rcqa2 c.1.6.1 (A:8-233) Alan 99.3 1.2E-11 7.8E-16 91.5 11.3 165 9-188 1-178 (226)
13 d1bd0a2 c.1.6.1 (A:12-244) Ala 99.3 4.2E-10 2.7E-14 81.6 16.5 183 9-196 1-190 (233)
14 d1rcqa2 c.1.6.1 (A:8-233) Alan 98.8 3.6E-08 2.3E-12 69.2 11.9 162 9-185 1-175 (226)
15 d1vfsa1 b.49.2.2 (A:4-12,A:250 94.8 0.067 4.3E-06 29.0 7.2 82 235-322 5-102 (145)
16 d1rcqa1 b.49.2.2 (A:1-7,A:234- 94.6 0.12 7.8E-06 27.3 8.0 79 238-322 5-100 (131)
17 d1bd0a1 b.49.2.2 (A:2-11,A:245 86.2 0.99 6.4E-05 21.5 7.6 76 238-321 9-100 (148)
18 d1dxea_ c.1.12.5 (A:) 2-dehydr 74.5 2.5 0.00016 18.9 14.4 184 21-228 7-211 (253)
19 g1uhe.1 b.52.2.1 (B:,A:) Pyruv 59.3 5 0.00032 17.0 5.2 67 278-351 47-114 (121)
20 d1i60a_ c.1.15.4 (A:) Hypothet 56.4 5.6 0.00036 16.7 8.6 82 148-231 54-143 (278)
21 d1wbha1 c.1.10.1 (A:1-213) KDP 51.5 6.7 0.00043 16.2 4.8 67 32-98 20-92 (213)
22 d1ct5a_ c.1.6.2 (A:) "Hypothet 47.7 7.6 0.00049 15.8 17.8 175 9-197 5-220 (244)
23 d1ppya_ b.52.2.1 (A:) Pyruvoyl 45.4 8.3 0.00053 15.6 5.6 67 279-350 49-115 (118)
24 d1olta_ c.1.28.2 (A:) Oxygen-i 43.5 8.9 0.00057 15.4 3.2 34 149-182 195-228 (441)
25 d1n62b2 d.133.1.1 (B:147-809) 43.5 8.9 0.00057 15.4 6.3 14 340-353 519-533 (663)
26 d2z1ca1 b.40.14.1 (A:2-72) Hyd 41.2 7.8 0.0005 15.7 2.1 16 305-320 30-45 (71)
27 d1lu4a_ c.47.1.10 (A:) Soluble 39.8 10 0.00065 15.0 3.7 36 329-364 92-131 (134)
28 d2f9ha1 b.161.1.1 (A:3-123) PT 36.4 11 0.00073 14.7 3.1 24 296-319 97-120 (121)
29 d2f9ha1 b.161.1.1 (A:3-123) PT 36.0 12 0.00074 14.7 3.1 25 295-319 96-120 (121)
30 d1izca_ c.1.12.5 (A:) Macropho 35.1 12 0.00077 14.6 9.6 100 20-119 30-146 (299)
31 d1d4ba_ d.15.2.1 (A:) Cell dea 34.4 11 0.00074 14.7 2.1 26 334-364 68-93 (122)
32 d1mxsa_ c.1.10.1 (A:) KDPG ald 34.0 12 0.0008 14.5 4.9 91 17-107 6-105 (216)
33 d1vhca_ c.1.10.1 (A:) Hypothet 32.3 13 0.00085 14.3 5.5 67 32-98 19-91 (212)
34 d2ot2a1 b.40.14.1 (A:1-90) Hyd 31.3 11 0.00073 14.7 1.7 16 305-320 37-52 (90)
35 d1ffvb2 d.133.1.1 (B:147-803) 29.0 15 0.00096 13.9 6.2 16 339-354 512-528 (657)
36 d1leha2 c.58.1.1 (A:1-134) Leu 24.2 15 0.00094 14.0 1.2 57 175-238 53-114 (134)
37 d1n62b2 d.133.1.1 (B:147-809) 21.6 21 0.0013 13.0 5.8 16 339-354 518-534 (663)
38 d1wa3a1 c.1.10.1 (A:2-203) KDP 21.2 21 0.0013 13.0 3.2 50 58-109 70-121 (202)
39 d1j8ua_ d.178.1.1 (A:) Phenyla 20.9 5.9 0.00038 16.5 -1.4 16 216-233 207-222 (307)
40 d1w32a_ c.1.8.3 (A:) Xylanase 20.8 18 0.0012 13.4 1.1 23 157-179 210-232 (346)
No 1
>d1hkva2 c.1.6.1 (A:46-310) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=0 Score=328.34 Aligned_cols=229 Identities=17% Similarity=0.161 Sum_probs=193.0
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCC--CCCCEEECCCCCHHHHH
Q ss_conf 5899999999999997217987987202158989999999808826772889999999707--98727704778866899
Q T0515 10 DKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERF--GKETHAYSVAYGDNEID 87 (365)
Q Consensus 10 d~~~i~~n~~~~~~~~~~~~~~i~yAvKaN~~~~vl~~l~~~g~g~dv~S~~El~~a~~~~--~~~~i~~~~~k~~~~i~ 87 (365)
|++.|++|+++++++|+. +++++||+||||++.|++.++++|+|+||+|++|+++|++.| +++++|++|+|++++++
T Consensus 1 D~~~lr~~~~~~~~af~~-~~~i~YA~KaN~~~~vl~~l~~~G~g~dvaS~~El~~al~~G~~~~~Ii~~gp~K~~~~l~ 79 (265)
T d1hkva2 1 DEDDFRSRCRETAAAFGS-GANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELT 79 (265)
T ss_dssp EHHHHHHHHHHHHHHTTS-GGGBEEEGGGSCCHHHHHHHHHHTCEEEECSHHHHHHHHHTTCCGGGEEECCSSCCHHHHH
T ss_pred CHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHEECCCCCHHHHHH
T ss_conf 979999999999985699-9869988633899999999997499759867515999998289989923355210035678
Q ss_pred HHHHCCC-EECCCCHHHHHHHHHHHC----CCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHH-----HHH----HHH
Q ss_conf 9997288-002189899999999725----88711311567774554344667887101314899-----999----973
Q T0515 88 EVVSHAD-KIIFNSISQLERFADKAA----GIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVP-----KVE----RVM 153 (365)
Q Consensus 88 ~a~~~g~-~i~iDs~~el~~i~~~~~----~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~~-----~~~----~~~ 153 (365)
.|+++|+ .+++||++||+++.+.++ ..++.+|+||++...++....+++..+|||++..+ ... ...
T Consensus 80 ~Al~~gv~~i~vDs~~El~~i~~~~~~~~~~~~v~lr~~p~~~~~~~~~~~~g~~~skFG~~~~~~~~~~~~~~~~~~~~ 159 (265)
T d1hkva2 80 AAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDH 159 (265)
T ss_dssp HHHHHTCCCEEECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEECSSCCSSSSEESTTSHHHHHHHHHHHCSS
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 89863855111454278999998865203342312233310124433311025533445652346678999999986167
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH--------HHCCCCCEEEECCCCCCCCCC----CCHHHHHHHHHHHHH
Q ss_conf 69048998506787677999999999999999--------844565166504777898889----788999999999861
Q T0515 154 DRINGFMIHNNCENKDFGLFDRMLGEIEERFG--------ALIARVDWVSLGGGIHFTGDD----YPVDAFSARLRAFSD 221 (365)
Q Consensus 154 ~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~idiGGG~~~~~~~----~~~~~~~~~i~~~~~ 221 (365)
.++.|+|||+|||+.+++.|.++++.+.+++. +.+.++++||+|||||++|.+ .+++.+++.+.+.++
T Consensus 160 l~~~GlH~HvGSq~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~l~~ldiGGG~~v~y~~~~~~~~~~~~~~~i~~~~~ 239 (265)
T d1hkva2 160 LRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVS 239 (265)
T ss_dssp EEEEEEECCCEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCEEECCCCBCCCSSTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 32666555411023445889999999998877678877886088864465458778667888889999999999999999
Q ss_pred ----CC---CEEEEEECCCEEEECC
Q ss_conf ----26---6089997162001055
Q T0515 222 ----RY---GVQIYLEPGEASITKS 239 (365)
Q Consensus 222 ----~~---~~~l~~EpGR~lva~a 239 (365)
++ +++||+||||||||++
T Consensus 240 ~~~~~~~~~~~~l~~EPGR~lvg~~ 264 (265)
T d1hkva2 240 DESTAVGLPTPKLVVEPGRAIAGPG 264 (265)
T ss_dssp HHHHTTTCCCCEEEBCCSHHHHSTT
T ss_pred HHHHHCCCCCCEEEEECCHHHHCCC
T ss_conf 9998629999789991852532589
No 2
>d1knwa2 c.1.6.1 (A:32-278) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=319.79 Aligned_cols=225 Identities=16% Similarity=0.215 Sum_probs=196.0
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCC------CCCEEECCCCCH
Q ss_conf 58999999999999972179879872021589899999998088267728899999997079------872770477886
Q T0515 10 DKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERFG------KETHAYSVAYGD 83 (365)
Q Consensus 10 d~~~i~~n~~~~~~~~~~~~~~i~yAvKaN~~~~vl~~l~~~g~g~dv~S~~El~~a~~~~~------~~~i~~~~~k~~ 83 (365)
|++.|+++++.+++. ..++||+|||+++.|++++++.|+|+||+|++|+++|+++|. +++++++|.|+.
T Consensus 1 D~~~ir~~~~~l~~~-----~~v~YA~KaN~~~~vl~~l~~~G~g~dv~S~~El~~al~~G~~~~~~~~~Ii~~g~~k~~ 75 (247)
T d1knwa2 1 DAQIIRRQIAALKQF-----DVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQ 75 (247)
T ss_dssp EHHHHHHHHHTTTTS-----SEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCTTTCTTSEEEEESCCCH
T ss_pred CHHHHHHHHHHHCCC-----CEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCHHHEEECCCCCHH
T ss_conf 979999999970378-----989997101898999999998499789829999999998077755675452532773104
Q ss_pred HHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHH------HHHHHHHCCCE
Q ss_conf 689999972880021898999999997258871131156777455434466788710131489------99999736904
Q T0515 84 NEIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDV------PKVERVMDRIN 157 (365)
Q Consensus 84 ~~i~~a~~~g~~i~iDs~~el~~i~~~~~~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~------~~~~~~~~~i~ 157 (365)
++++.+++.|+.+++||++|++++.+..++..+.+|+||+++.+++....+++..+|||++.. +.++..+.++.
T Consensus 76 ~~l~~a~~~~~~i~~ds~~el~~l~~~~~~~~i~lRinp~~~~~~~~~~~~~~~~sKFG~~~~~~~~~~~~~~~~~~~l~ 155 (247)
T d1knwa2 76 ATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLV 155 (247)
T ss_dssp HHHHHHHHHTCCEEESSHHHHHHHHHHSTTCEEEEEEECSCCSSCTTSCCSSSTTCCCSEEGGGHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 68999998763301014678999986423112320232364444554333322224555440222456566552155032
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC----CCHHHHHHHHHHHHHC------CCEEE
Q ss_conf 8998506787677999999999999999844565166504777898889----7889999999998612------66089
Q T0515 158 GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTGDD----YPVDAFSARLRAFSDR------YGVQI 227 (365)
Q Consensus 158 Gih~H~gs~~~~~~~~~~~l~~~~~~~~~~~~~~~~idiGGG~~~~~~~----~~~~~~~~~i~~~~~~------~~~~l 227 (365)
|+|||+|||+. ...+.+.+..+.+.+.+++.++++||+|||||++|.+ ++++.+++.++...++ .+++|
T Consensus 156 GlH~HigSq~~-~~~~~~~~~~~~~~~~~~g~~~~~ldiGGGf~v~y~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l 234 (247)
T d1knwa2 156 GIHMHIGSGVD-YAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKL 234 (247)
T ss_dssp EEECCCCCTTC-HHHHHHHHHHHHHHHHHHTCCCSEEECCCCCCCCCSTTCCCCCHHHHHHHHHHHHHHHHHHHTSCCEE
T ss_pred EEHHCCCCCCH-HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 20212476520-46789999998888863057751887568514347777899999999999999999999855999889
Q ss_pred EEECCCEEEECCE
Q ss_conf 9971620010550
Q T0515 228 YLEPGEASITKST 240 (365)
Q Consensus 228 ~~EpGR~lva~ag 240 (365)
|+|||||+|++||
T Consensus 235 ~~EPGR~lva~aG 247 (247)
T d1knwa2 235 EIEPGRFLVAQSG 247 (247)
T ss_dssp EECCSHHHHGGGE
T ss_pred EEECCHHHHHCCC
T ss_conf 9938788772589
No 3
>d7odca2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=0 Score=313.03 Aligned_cols=222 Identities=16% Similarity=0.174 Sum_probs=190.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCC--CCCCEEECCCCCHHHHH
Q ss_conf 5899999999999997217987987202158989999999808826772889999999707--98727704778866899
Q T0515 10 DKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERF--GKETHAYSVAYGDNEID 87 (365)
Q Consensus 10 d~~~i~~n~~~~~~~~~~~~~~i~yAvKaN~~~~vl~~l~~~g~g~dv~S~~El~~a~~~~--~~~~i~~~~~k~~~~i~ 87 (365)
|++.|++|+++|+++| |+++++||+||||++.|++.++++|+|+||+|++|+++|+++| ++++++++|+|++++|+
T Consensus 1 dl~~i~~~~~~~~~~~--p~v~~~YA~KaN~~~~il~~l~~~G~g~dv~S~~El~~a~~aG~~~~~Iv~~g~~K~~~~l~ 78 (240)
T d7odca2 1 DLGDILKKHLRWLKAL--PRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQLVQGLGVPAERVIYANPCKQVSQIK 78 (240)
T ss_dssp EHHHHHHHHHHHHHHC--TTEEEEEEGGGCCCHHHHHHHHHHTCEEEECSHHHHHHHHHTTCCGGGEEECCSSCCHHHHH
T ss_pred CHHHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCEEECCCCCCHHHHH
T ss_conf 9789999999999868--99879888523898999999998399817624268999984499943037427752067899
Q ss_pred HHHHCCCE-ECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHH------HHHHHCCCEEEE
Q ss_conf 99972880-02189899999999725887113115677745543446678871013148999------999736904899
Q T0515 88 EVVSHADK-IIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPK------VERVMDRINGFM 160 (365)
Q Consensus 88 ~a~~~g~~-i~iDs~~el~~i~~~~~~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~~~------~~~~~~~i~Gih 160 (365)
.|+++|+. +++||++|++++.+..+..++.+|++|..... +++..+|||++..+. +...+.++.|+|
T Consensus 79 ~a~~~g~~~~~~ds~~el~~i~~~~~~~~v~~ri~~~~~~~------~~~~~~kfG~~~~~~~~~~~~~~~~~l~l~GlH 152 (240)
T d7odca2 79 YAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIATDDSKA------VCRLSVKFGATLKTSRLLLERAKELNIDVIGVS 152 (240)
T ss_dssp HHHHTTCCEEEECSHHHHHHHHHHCTTCEEEEEBCC-----------------CCCBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC------CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 99886333422102778899987466566542234455544------367676653438999999998640694687611
Q ss_pred EEECCCCCCHHHHHHHHHHHHH---HHHHHCCCCCEEEECCCCCCCCCC-CCHHHHHHHHHHHHHC-----CCEEEEEEC
Q ss_conf 8506787677999999999999---999844565166504777898889-7889999999998612-----660899971
Q T0515 161 IHNNCENKDFGLFDRMLGEIEE---RFGALIARVDWVSLGGGIHFTGDD-YPVDAFSARLRAFSDR-----YGVQIYLEP 231 (365)
Q Consensus 161 ~H~gs~~~~~~~~~~~l~~~~~---~~~~~~~~~~~idiGGG~~~~~~~-~~~~~~~~~i~~~~~~-----~~~~l~~Ep 231 (365)
||+|||+.+++.|.++++.+.. .+.+.+.++++||+|||||++|+. .+++++++.+++.+++ .+++|++||
T Consensus 153 ~H~GSq~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ldiGGG~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~l~~EP 232 (240)
T d7odca2 153 FHVGSGCTDPDTFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEP 232 (240)
T ss_dssp CCCCSSCCCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECCCCCCCSSSSSSCHHHHHHHHHHHHHHHSCGGGTCEEEECC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 00010343288899999998888899998299805998488768788899999999999999999862648998899968
Q ss_pred CCEEEECC
Q ss_conf 62001055
Q T0515 232 GEASITKS 239 (365)
Q Consensus 232 GR~lva~a 239 (365)
|||+||+|
T Consensus 233 GR~lvA~A 240 (240)
T d7odca2 233 GRYYVASA 240 (240)
T ss_dssp SHHHHGGG
T ss_pred CHHHHCCC
T ss_conf 67985079
No 4
>d1twia2 c.1.6.1 (A:50-313) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=0 Score=318.74 Aligned_cols=230 Identities=16% Similarity=0.135 Sum_probs=195.6
Q ss_pred CHHHHHHHHHHHHHHHHC------CCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCC--CCCCEEECCCC
Q ss_conf 589999999999999721------7987987202158989999999808826772889999999707--98727704778
Q T0515 10 DKAKLTRNMERIAHVREK------SGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERF--GKETHAYSVAY 81 (365)
Q Consensus 10 d~~~i~~n~~~~~~~~~~------~~~~i~yAvKaN~~~~vl~~l~~~g~g~dv~S~~El~~a~~~~--~~~~i~~~~~k 81 (365)
+++.|++|+++++++|.. .+++++||+||||++.||+.+++.|+|+||+|++|+++|++.| ++++++++|.|
T Consensus 1 s~~~i~~n~~~~~~af~~~~~~~g~~~~i~YAvKaN~~~~vl~~l~~~G~g~Dv~S~~El~~al~~G~~~~~I~~~gp~k 80 (264)
T d1twia2 1 SEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCK 80 (264)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHSCCEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCGGGEEECCSSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCHH
T ss_conf 97999999999999999988851996699988456898999999998299805625148988764179743344678546
Q ss_pred CHHHHHHHHHCCC-EECCCCHHHHHHHHHHHC----CCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHH-----HHHH
Q ss_conf 8668999997288-002189899999999725----88711311567774554344667887101314899-----9999
Q T0515 82 GDNEIDEVVSHAD-KIIFNSISQLERFADKAA----GIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVP-----KVER 151 (365)
Q Consensus 82 ~~~~i~~a~~~g~-~i~iDs~~el~~i~~~~~----~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~~-----~~~~ 151 (365)
++++++.|+++|+ .+++||++|++++.+.++ ...+.+|+||..+...+..+.+++..+|||++..+ ....
T Consensus 81 ~~~~i~~a~~~gv~~~~~ds~~el~~i~~~a~~~~~~~~v~~Ri~~~~~~~~~~~~~~~~~~skfG~~~~~~~~~~~~~~ 160 (264)
T d1twia2 81 TKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKM 160 (264)
T ss_dssp CHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTSHHHHHHHH
T ss_pred HHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 78888774323121000010578888888898709983211022457774445430145533456662777788999999
Q ss_pred -H---HCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH---HHHCCCCCEEEECCCCCCCCCC----CCHHHHHHHHHHHH
Q ss_conf -7---36904899850678767799999999999999---9844565166504777898889----78899999999986
Q T0515 152 -V---MDRINGFMIHNNCENKDFGLFDRMLGEIEERF---GALIARVDWVSLGGGIHFTGDD----YPVDAFSARLRAFS 220 (365)
Q Consensus 152 -~---~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~---~~~~~~~~~idiGGG~~~~~~~----~~~~~~~~~i~~~~ 220 (365)
. ..++.|+|||+|||+.+++.|.++++.+.+++ ++.++++++||+|||||++|.+ .+++.+++.+.+.+
T Consensus 161 ~~~~~~l~~~GlH~H~gS~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ldiGGGf~v~y~~~~~~~~~~~~~~~i~~~l 240 (264)
T d1twia2 161 ALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLADAIINTM 240 (264)
T ss_dssp HHHCSSEEEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHHHTTCCCSEEECCCCBCCCSSSSSCCCCHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98731344344023201023442668999999999999999839986577613774656788889999999999999999
Q ss_pred HCC-----CEEEEEECCCEEEECC
Q ss_conf 126-----6089997162001055
Q T0515 221 DRY-----GVQIYLEPGEASITKS 239 (365)
Q Consensus 221 ~~~-----~~~l~~EpGR~lva~a 239 (365)
++. .++||+|||||+||+|
T Consensus 241 ~~~~~~~~~~~l~~EPGR~lva~A 264 (264)
T d1twia2 241 LKYKDKVEMPNLILEPGRSLVATA 264 (264)
T ss_dssp HTTTTTSCCCEEEECCSHHHHGGG
T ss_pred HHHCCCCCCCEEEECCCHHHEECC
T ss_conf 985056899769990868982369
No 5
>d1f3ta2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Trypanosoma brucei [TaxId: 5691]}
Probab=100.00 E-value=0 Score=311.90 Aligned_cols=222 Identities=16% Similarity=0.187 Sum_probs=192.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCC--CCCCEEECCCCCHHHHH
Q ss_conf 5899999999999997217987987202158989999999808826772889999999707--98727704778866899
Q T0515 10 DKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERF--GKETHAYSVAYGDNEID 87 (365)
Q Consensus 10 d~~~i~~n~~~~~~~~~~~~~~i~yAvKaN~~~~vl~~l~~~g~g~dv~S~~El~~a~~~~--~~~~i~~~~~k~~~~i~ 87 (365)
|++.|++++++|+++| |+++++||+||||++.||++++++|+|+||+|++|+++|++.| +++++|++|+|++++++
T Consensus 1 dl~~i~~~~~~~~~~~--p~v~~~YA~KaN~~~~il~~l~~~g~g~dv~S~~El~~al~~G~~~~~Iif~g~~k~~~ei~ 78 (240)
T d1f3ta2 1 DLGDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIGVPPEKIIYANPCKQISHIR 78 (240)
T ss_dssp EHHHHHHHHHHHHHHC--TTEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCGGGEEECCSSCCHHHHH
T ss_pred CHHHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCEEECCCCCHHHHHH
T ss_conf 9789999999999878--99879887501799999999998699868425136899998389964246506531057799
Q ss_pred HHHHCCC-EECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHH------HHHHCCCEEEE
Q ss_conf 9997288-0021898999999997258871131156777455434466788710131489999------99736904899
Q T0515 88 EVVSHAD-KIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKV------ERVMDRINGFM 160 (365)
Q Consensus 88 ~a~~~g~-~i~iDs~~el~~i~~~~~~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~~~~------~~~~~~i~Gih 160 (365)
.++++|+ .+++||++|++++.+..+..++.+|++++... .+++..+|||++..+.. ...+.++.|+|
T Consensus 79 ~a~~~g~~~~~~ds~~el~~i~~~~~~~~~~~ri~~~~~~------~~~~~~~kFGi~~~~~~~~~~~~~~~~~~l~GlH 152 (240)
T d1f3ta2 79 YARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRISTDDSL------ARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVS 152 (240)
T ss_dssp HHHHTTCCEEEECSHHHHHHHHHHCTTCEEEEEBCC----------------CCSCBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCC------CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 9987124532442101255555533555644221232222------4556655201337899999998733366456665
Q ss_pred EEECCCCCCHHHHHHHHHHHHHH---HHHHCCCCCEEEECCCCCCCCCC-CCHHHHHHHHHHHHHC-----CCEEEEEEC
Q ss_conf 85067876779999999999999---99844565166504777898889-7889999999998612-----660899971
Q T0515 161 IHNNCENKDFGLFDRMLGEIEER---FGALIARVDWVSLGGGIHFTGDD-YPVDAFSARLRAFSDR-----YGVQIYLEP 231 (365)
Q Consensus 161 ~H~gs~~~~~~~~~~~l~~~~~~---~~~~~~~~~~idiGGG~~~~~~~-~~~~~~~~~i~~~~~~-----~~~~l~~Ep 231 (365)
||+|||+.+++.|.++++.+..+ +.+.+.++++||+|||||+.|+. .+++.+++.+.+.+++ .+++||+||
T Consensus 153 ~H~GS~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ldiGGG~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~l~~EP 232 (240)
T d1f3ta2 153 FHVGSGSTDASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEP 232 (240)
T ss_dssp CCCCSCCSCTHHHHHHHHHHHHHHHHHHHTTCCCCEEECCCCCCSSTTSSSCHHHHHHHHHHHHHHHSCCCTTCEEEECC
T ss_pred EEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 42222026889999999988999999998299743550267657788899999999999999999864768997899932
Q ss_pred CCEEEECC
Q ss_conf 62001055
Q T0515 232 GEASITKS 239 (365)
Q Consensus 232 GR~lva~a 239 (365)
|||+||+|
T Consensus 233 GR~lva~A 240 (240)
T d1f3ta2 233 GRYYVASA 240 (240)
T ss_dssp SHHHHGGG
T ss_pred CHHHHCCC
T ss_conf 87985179
No 6
>d1twia1 b.49.2.3 (A:15-49,A:314-448) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=2.3e-33 Score=230.95 Aligned_cols=134 Identities=22% Similarity=0.278 Sum_probs=112.2
Q ss_pred EEEECCCEEEECCEEEEEEEEEECCC-CCEEEEECCCCCCCCCCHHCCCCCCCC---CCCCCCEEEEEEECCCCCCCEEE
Q ss_conf 99971620010550899999974047-746999826543102420102453233---77999437999706668763543
Q T0515 227 IYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLLIYRETAKV---LPNEGSHSYMICGKSCLAGDVFG 302 (365)
Q Consensus 227 l~~EpGR~lva~ag~lit~V~~~k~~-~~~~~i~d~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~G~~C~~~D~~~ 302 (365)
++.||||.+ ..+|+|+|+|+++|++ +++|+++|+|+++++ ++.++...+.. ...++.++++|+||+|+++|+|+
T Consensus 24 ~~~~~g~~~-~~~G~lvtrV~~vK~~~~~~~~ivDaG~n~l~-rp~~y~~~~~~~~~~~~~~~~~~~v~Gp~C~s~D~l~ 101 (170)
T d1twia1 24 LAEKFGTPL-YVMGYLLGKVHHIKETPVTKWVMIDAGMNDMM-RPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFG 101 (170)
T ss_dssp HHHHHCSSE-EEEEEEEEEEEEEEECSSCEEEEESCCTTTCC-HHHHHCCCCCEEESBCCSCEEEEEEECSSSCTTCEEE
T ss_pred EEEECCCEE-EEEEEEEEEEEEEEECCCEEEEEEECCHHHCC-CCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEE
T ss_conf 884078358-65679999999999549907999938567554-3154541003211245555068997076246410789
Q ss_pred CCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEE-CCHHHHHHH
Q ss_conf 0453898897778998278845513213678867880899977880899983-687999873
Q T0515 303 EFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVRE-FTYADYEQS 363 (365)
Q Consensus 303 ~~~~lp~l~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v~~~~dg~~~~ir~-~~~~d~~~~ 363 (365)
++..+|++++||+|+|.++|||+++|+|+||++|+|++|+++ +|++++||+ ||+||+++.
T Consensus 102 ~~~~lp~l~~GD~l~i~~~GAY~~smss~fN~~~~PaeVl~~-~g~~~lIr~ret~eDl~~~ 162 (170)
T d1twia1 102 RDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTS-KKGVFLIRERETYADLIAK 162 (170)
T ss_dssp EEEEEECCCTTCEEEEECCSSSSGGGCBCTTTCCCCEEEEEE-TTEEEEEECCCCHHHHTTT
T ss_pred EEEECCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCEEEEEE-CCEEEEEECCCCHHHHHHC
T ss_conf 862056568989999927057543505110289998299998-9989999858999999855
No 7
>d1hkva1 b.49.2.3 (A:2-45,A:311-447) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=3.3e-34 Score=236.32 Aligned_cols=134 Identities=19% Similarity=0.246 Sum_probs=113.6
Q ss_pred EEEEEECCCEEEECCEEEEEEEEEECC-----C-CCEEEEECCCCCCCCCCHHCCCCCCCCC-----CCCCCEEEEEEEC
Q ss_conf 089997162001055089999997404-----7-7469998265431024201024532337-----7999437999706
Q T0515 225 VQIYLEPGEASITKSTTLEVTVLDTLY-----N-GKNLAIVDSSIEAHMLDLLIYRETAKVL-----PNEGSHSYMICGK 293 (365)
Q Consensus 225 ~~l~~EpGR~lva~ag~lit~V~~~k~-----~-~~~~~i~d~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~G~ 293 (365)
++|++||||+++ +++.+.+|-.+|. + +++|+++|+||++++ +|.+|+..+... .+++..+++|+||
T Consensus 31 ~~~~~epgr~~~--~~~~ly~vg~vK~v~~k~~~~r~fv~vDgGm~d~i-RPaLY~A~h~i~~~~~~~~~~~~~~~VvGp 107 (181)
T d1hkva1 31 TQLAQEYGTPLF--VIITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNI-RTALYGAQYDVRLVSRVSDAPPVPARLVGK 107 (181)
T ss_dssp HHHHHHHCSSEE--EEEEEEECCEEEEEECSSSCEEEEEECSCCTTTCC-HHHHHCCCCCEEECSSCCCSCEEEEEEECS
T ss_pred HHHHCCCCCCEE--EEEEEEECCEEEEEECCCCCCCEEEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 054237896235--47899971028999416888667999657745564-421047635321344643467524556514
Q ss_pred CCCCCCEEECCCCCC-CCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEE-CCHHHHHH
Q ss_conf 668763543045389-8897778998278845513213678867880899977880899983-68799987
Q T0515 294 SCLAGDVFGEFRFAE-ELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVRE-FTYADYEQ 362 (365)
Q Consensus 294 ~C~~~D~~~~~~~lp-~l~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v~~~~dg~~~~ir~-~~~~d~~~ 362 (365)
+|+++|+|.++..+| ++++||+|+|.++|||+++|+||||++|+|++|+++ ||+.++||| ||+||.++
T Consensus 108 ~CesgDil~~d~~LP~~l~~GDlLai~~~GAYg~sMsSnyN~~prPaeV~V~-dg~~~lIrrREt~eDll~ 177 (181)
T d1hkva1 108 HCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVH-AGNARLVLRRETVDDLLS 177 (181)
T ss_dssp SSSTTCEEEEEEEEETTCCTTCEEEESCCSSSTGGGCBCGGGCCCCEEEEEE-TTEEEEEECCCCHHHHHT
T ss_pred CCCCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCEEEEE-CCEEEEEECCCCHHHHHH
T ss_conf 7765557411456753489969999843411124535332389998189998-994999985799999998
No 8
>d1knwa1 b.49.2.3 (A:2-31,A:279-422) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]}
Probab=99.97 E-value=3.6e-32 Score=223.29 Aligned_cols=134 Identities=19% Similarity=0.289 Sum_probs=108.1
Q ss_pred EEEEECCCEEEECCEEEEEEEEEECCC-CCEEEEECCCCCCCCCCHHCCCCCCCC---------CCCCCCEEEEEEECCC
Q ss_conf 899971620010550899999974047-746999826543102420102453233---------7799943799970666
Q T0515 226 QIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLLIYRETAKV---------LPNEGSHSYMICGKSC 295 (365)
Q Consensus 226 ~l~~EpGR~lva~ag~lit~V~~~k~~-~~~~~i~d~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~G~~C 295 (365)
+|+.|+||++++ .+|+|+|+++|++ +++|+++|+|+++++ ++.++...+.. ....+.++++|+||+|
T Consensus 18 ~l~~e~G~~~~~--~vlvtrV~~vK~~~g~~~~i~D~G~n~~~-rp~~y~~~~~~~~~~~~~~~~~~~~~~~~~I~Gp~C 94 (174)
T d1knwa1 18 RLPAEFGCPVWV--YVLITQVRSVKQMGSRHFVLVDAGFNDLM-RPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLC 94 (174)
T ss_dssp HHHHHHCSSEEE--EEEEEEEEEEEEETTEEEEEESCCTTTSC-HHHHHCCCCCEEEECTTCCCCTTCCEEEEEEECSSS
T ss_pred CCEECCCCEEEE--EEEEEEEEEEEECCCEEEEEECCCCCCCH-HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 222026967899--99999999999579929999906601177-777325201432000111122357736899980577
Q ss_pred CCCCEEECCCCC-------CCCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEE-CCHHHHHHH
Q ss_conf 876354304538-------98897778998278845513213678867880899977880899983-687999873
Q T0515 296 LAGDVFGEFRFA-------EELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVRE-FTYADYEQS 363 (365)
Q Consensus 296 ~~~D~~~~~~~l-------p~l~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v~~~~dg~~~~ir~-~~~~d~~~~ 363 (365)
+++|+|+++..+ |++++||+|+|.++|||+++|+|+||++|+|++|+++ ||++++||+ ||+||+++.
T Consensus 95 ~~~D~l~~~~~l~~~~~~~p~l~~GD~l~i~~~GAY~~s~ss~Fn~~~~Pa~V~~~-~g~~~lIr~ret~edl~~~ 169 (174)
T d1knwa1 95 ESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFD-NGQARLIRRRQTIEELLAL 169 (174)
T ss_dssp STTCBSSBCTTSCBCCEEEECCCTTCEEEEESCSSSSGGGCCCTTTCCCCCEEEEE-TTEEEEEECCCCHHHHHTT
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCEEEEE-CCEEEEEECCCCHHHHHHC
T ss_conf 88768820456552113477789999999931513021436645599988199999-9989999868999999853
No 9
>d1f3ta1 b.49.2.3 (A:14-43,A:284-422) Eukaryotic ornithine decarboxylase (ODC) {Trypanosoma brucei [TaxId: 5691]}
Probab=99.96 E-value=2.2e-29 Score=205.39 Aligned_cols=134 Identities=22% Similarity=0.283 Sum_probs=109.8
Q ss_pred HHHCCCEEEEEECCCEEEECCEEEEEEEEEECCCCC---------------EEEEECCCCCCCCCCHHCCCCCCC-----
Q ss_conf 861266089997162001055089999997404774---------------699982654310242010245323-----
Q T0515 219 FSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNGK---------------NLAIVDSSIEAHMLDLLIYRETAK----- 278 (365)
Q Consensus 219 ~~~~~~~~l~~EpGR~lva~ag~lit~V~~~k~~~~---------------~~~i~d~g~~~~~~~~~~~~~~~~----- 278 (365)
++++.++.+++|||||+| |++|+++|+.+|.... .++.+|.|+++.+.+.++......
T Consensus 12 ~~~~~~~~~~~epg~ffv--AfTLvt~VI~kr~~~~~~~~~~~~~~~~~~~~~yyindG~ygsf~~~l~d~~~~~~~~~~ 89 (169)
T d1f3ta1 12 LCKKISMNTCDEGDPFFV--AFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVVRPLPQR 89 (169)
T ss_dssp HHHHCC------CCCEEE--EEEEEEEEEEEEEC---------------CCEEEEESCCTTTGGGHHHHSCCCCCCEECS
T ss_pred HHHHCCCEEEECCCCEEE--EEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCEEEEEEC
T ss_conf 887559659975988279--999999999998714752222344457874169996887878985876155314466302
Q ss_pred -CCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEE
Q ss_conf -3779994379997066687635430453898897778998278845513213678867880899977880899983
Q T0515 279 -VLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVRE 354 (365)
Q Consensus 279 -~~~~~~~~~~~i~G~~C~~~D~~~~~~~lp~l~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v~~~~dg~~~~ir~ 354 (365)
..++++.++++|+||||++.|++.++..||++++||||+|+|+|||+++|+|+|||+++|+++.+..++..+++|+
T Consensus 90 ~~~~~~~~~~~~v~GptCds~D~i~~~~~lPel~vGD~L~~~n~GAYt~~~ss~FNGf~~p~v~yv~s~~~~~~ir~ 166 (169)
T d1f3ta1 90 EPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRE 166 (169)
T ss_dssp CCCTTCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSGGGCCCGGGCCCCEEEEECCSCSTTHHHH
T ss_pred CCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHC
T ss_conf 67888863789998226776454502420551257988999378845132267788988980899974987888302
No 10
>d7odca1 b.49.2.3 (A:2-43,A:284-418) Eukaryotic ornithine decarboxylase (ODC) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.92 E-value=9.1e-26 Score=182.18 Aligned_cols=145 Identities=20% Similarity=0.149 Sum_probs=109.3
Q ss_pred CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEECCEEEEEEEEEECCCC--------------
Q ss_conf 456516650477789888978899999999986126608999716200105508999999740477--------------
Q T0515 188 IARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNG-------------- 253 (365)
Q Consensus 188 ~~~~~~idiGGG~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~EpGR~lva~ag~lit~V~~~k~~~-------------- 253 (365)
++.+.++|.|+++ .. .+.... ..+.+..|||||.| |++|+++|+.+|...
T Consensus 7 ~~d~~~~d~g~~~---------~~---~~~~~~--~~v~~~~epg~~~v--AfTL~~~Vi~kr~~~~~~~~~~~~~~~~~ 70 (177)
T d7odca1 7 EFDCHILDEGFTA---------KD---ILDQKI--NEVSSSDDKDAFYV--AFTLAVNIIAKKTVWKEQPGSDDEDESNE 70 (177)
T ss_dssp TEEEEEECSSCCH---------HH---HHHHHH--C------CCCCEEE--EEEEEEEEEEEEEEC-------------C
T ss_pred CCCCCHHHCCCCH---------HH---HHCCCC--CEEEEECCCCEEEE--EEEEEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 5565342316214---------24---403235--51687158974787--89999999999874255666554344777
Q ss_pred -CEEEEECCCCCCCCCCHHCCCCCCCC------CCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCHHHH
Q ss_conf -46999826543102420102453233------77999437999706668763543045389889777899827884551
Q T0515 254 -KNLAIVDSSIEAHMLDLLIYRETAKV------LPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTM 326 (365)
Q Consensus 254 -~~~~i~d~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~G~~C~~~D~~~~~~~lp~l~~GD~l~~~~~GAY~~ 326 (365)
..++.++.|+++.+.+.++....+.. .+.++.++++|+||||++.|++++++.+|++++||||+|+|+||||+
T Consensus 71 ~~~~yyindGvygsf~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~GptCds~D~i~~~~~lP~l~vGD~L~f~~~GAYt~ 150 (177)
T d7odca1 71 QTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTV 150 (177)
T ss_dssp CEEEEEESCCTTTTTHHHHHSCCCCCCEESSCCCTTCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSG
T ss_pred CEEEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCCCCHH
T ss_conf 22899978987687657543545420010357887666178999874178887984554388545267899947885521
Q ss_pred HHHCCCCCCCCCEEEEEECCCE
Q ss_conf 3213678867880899977880
Q T0515 327 VKKNWFNGVKMPAIAIRELDGS 348 (365)
Q Consensus 327 ~~~s~fn~~~~p~~v~~~~dg~ 348 (365)
+|+++|||+++|.++.+.+.+.
T Consensus 151 ~~ss~FNGf~~p~v~~v~s~~~ 172 (177)
T d7odca1 151 AAASTFNGFQRPNIYYVMSRPM 172 (177)
T ss_dssp GGCCCGGGCCCCEEEEEEEHHH
T ss_pred HCCCCCCCCCCCEEEEEECHHH
T ss_conf 1056888988997999976558
No 11
>d1vfsa2 c.1.6.1 (A:13-249) Alanine racemase {Streptomyces lavendulae [TaxId: 1914]}
Probab=99.39 E-value=2.6e-12 Score=95.88 Aligned_cols=176 Identities=10% Similarity=-0.006 Sum_probs=123.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCC----CHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCCCEEECCCCCHH
Q ss_conf 5899999999999997217987987202158----9899999998088-2677288999999970798727704778866
Q T0515 10 DKAKLTRNMERIAHVREKSGAKALLALKCFA----TWSVFDLMRDYMD-GTTSSSLFEVRLGRERFGKETHAYSVAYGDN 84 (365)
Q Consensus 10 d~~~i~~n~~~~~~~~~~~~~~i~yAvKaN~----~~~vl~~l~~~g~-g~dv~S~~El~~a~~~~~~~~i~~~~~k~~~ 84 (365)
|+++|++|++.+++.. ++.+++..||||. ...|.+.+.+.|+ +|-|++..|....++.|.+..++..+...++
T Consensus 1 DL~al~~N~~~l~~~~--~~~~i~aVVKAnAYGhG~~~ia~~l~~~g~~~f~Va~~~EA~~lR~~g~~~~Il~l~~~~~~ 78 (237)
T d1vfsa2 1 DLDAVRANVRALRARA--PRSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALELRAAGIQGRIMCWLWTPGG 78 (237)
T ss_dssp EHHHHHHHHHHHHTTS--TTSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCSEEEECCCCTTC
T ss_pred CHHHHHHHHHHHHHHC--CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCEEECCCCCHH
T ss_conf 9799999999999768--99829999813157477999999999869998987400348899870468972002588727
Q ss_pred HHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHH------HHHH----HC
Q ss_conf 8999997288002189899999999725887113115677745543446678871013148999------9997----36
Q T0515 85 EIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPK------VERV----MD 154 (365)
Q Consensus 85 ~i~~a~~~g~~i~iDs~~el~~i~~~~~~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~~~------~~~~----~~ 154 (365)
+++.++++++.++++|.++++.+.+.+......++|.+.++.+.+ |+|+...+. .... ..
T Consensus 79 ~~~~~~~~~i~~~i~s~~~l~~l~~~a~~~~~~~~vhLkiDTGM~----------RlG~~~~e~~~l~~~~~~~~~~~~l 148 (237)
T d1vfsa2 79 PWREAIETDIDVSVSGMWALDEVRAAARAAGRTARIQLKADTGLG----------RNGCQPADWAELVGAAVAAQAEGTV 148 (237)
T ss_dssp CHHHHHHTTCEEEECSHHHHHHHHHHHHHHTSCEEEEEEBCSSCC----------SSSBCHHHHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCC----------CCCCCHHHHHHHHHHHHHHHCCCCE
T ss_conf 899999723452434198899999999965997269998558877----------7788835789999998865306863
Q ss_pred CCEEEEEEECCCCC-CHHHHHHHHHHHHHH---HHHHCCCCCEEEEC
Q ss_conf 90489985067876-779999999999999---99844565166504
Q T0515 155 RINGFMIHNNCENK-DFGLFDRMLGEIEER---FGALIARVDWVSLG 197 (365)
Q Consensus 155 ~i~Gih~H~gs~~~-~~~~~~~~l~~~~~~---~~~~~~~~~~idiG 197 (365)
.+.|+..|..+-.. +.....+.++.+.+. +...+.+...+.++
T Consensus 149 ~~~Gi~TH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~~~~~~~~h~a 195 (237)
T d1vfsa2 149 QVTGVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIA 195 (237)
T ss_dssp EEEEEECCCSSTTSTTCHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 26556512024531122668999999999999999718999858951
No 12
>d1rcqa2 c.1.6.1 (A:8-233) Alanine racemase {Pseudomonas aeruginosa [TaxId: 287]} SCOP: d1vfsa2 d1bd0a2
Probab=99.32 E-value=1.2e-11 Score=91.55 Aligned_cols=165 Identities=18% Similarity=0.100 Sum_probs=116.1
Q ss_pred ECHHHHHHHHHHHHHHHHCCCCEEEEEECCCC----CHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCC-CEEECCCCCH
Q ss_conf 55899999999999997217987987202158----989999999808826772889999999707987-2770477886
Q T0515 9 IDKAKLTRNMERIAHVREKSGAKALLALKCFA----TWSVFDLMRDYMDGTTSSSLFEVRLGRERFGKE-THAYSVAYGD 83 (365)
Q Consensus 9 ~d~~~i~~n~~~~~~~~~~~~~~i~yAvKaN~----~~~vl~~l~~~g~g~dv~S~~El~~a~~~~~~~-~i~~~~~k~~ 83 (365)
+|++.|++|++.+++.. +.+++..||||. ...|.+.+.+...+|.|++..|....++.|... +.+..+...+
T Consensus 1 Idl~al~~Ni~~~r~~~---~~~~~aVvKanAYGhG~~~ia~~l~~g~~~f~Va~~~EA~~lr~~g~~~~Ilvl~g~~~~ 77 (226)
T d1rcqa2 1 IDLQALRHNYRLAREAT---GARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIRQPILLLEGFFEA 77 (226)
T ss_dssp EEHHHHHHHHHHHHHHH---CSEEEEECHHHHHTTCHHHHHHHHTTTCSEEEESSHHHHHHHHHTTCCSCEEETTCCSSG
T ss_pred CCHHHHHHHHHHHHHCC---CCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCEEEECCCCCH
T ss_conf 98789999999998626---996899860475566888999999963625334418899999875310000356479898
Q ss_pred HHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHH------HH-HCCC
Q ss_conf 6899999728800218989999999972588711311567774554344667887101314899999------97-3690
Q T0515 84 NEIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVE------RV-MDRI 156 (365)
Q Consensus 84 ~~i~~a~~~g~~i~iDs~~el~~i~~~~~~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~~~~~------~~-~~~i 156 (365)
++++.++++++..+++|.++++.+.+.....+ +.|.+.++.+. .|+|++.++..+ .. ...+
T Consensus 78 ~~~~~~~~~~i~~~i~s~~~l~~~~~~~~~~~--~~vhlkiDtGm----------~R~G~~~~e~~~~~~~i~~~~~l~~ 145 (226)
T d1rcqa2 78 SELELIVAHDFWCVVHCAWQLEAIERASLARP--LNVWLKMDSGM----------HRVGFFPEDFRAAHERLRASGKVAK 145 (226)
T ss_dssp GGHHHHHHTTEEEEECSHHHHHHHHHCCCSSC--EEEEEEBCSSS----------CSSSBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHCCCCEEECCHHHHHHHHHHHCCCC--CCEEEEECCCC----------CCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 89999996077233548899999998623887--30477623667----------6144128889999998863367413
Q ss_pred EEEEEEECCCC-CCHHHHHHHHHHHHHHHHHHC
Q ss_conf 48998506787-677999999999999999844
Q T0515 157 NGFMIHNNCEN-KDFGLFDRMLGEIEERFGALI 188 (365)
Q Consensus 157 ~Gih~H~gs~~-~~~~~~~~~l~~~~~~~~~~~ 188 (365)
.|+..|..+-. .+.....+.+..+.+....+.
T Consensus 146 ~Gi~tHfa~ad~~~~~~~~~Q~~~F~~~~~~l~ 178 (226)
T d1rcqa2 146 IVMMSHFSRADELDCPRTEEQLAAFSAASQGLE 178 (226)
T ss_dssp EEEECCCSSTTCTTCTHHHHHHHHHHHHHTTCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 001122056500221799999999999997303
No 13
>d1bd0a2 c.1.6.1 (A:12-244) Alanine racemase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.26 E-value=4.2e-10 Score=81.63 Aligned_cols=183 Identities=13% Similarity=-0.008 Sum_probs=125.8
Q ss_pred ECHHHHHHHHHHHHHHHHCCCCEEEEEECCCC----CHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCCCEEECCCCCH
Q ss_conf 55899999999999997217987987202158----9899999998088-267728899999997079872770477886
Q T0515 9 IDKAKLTRNMERIAHVREKSGAKALLALKCFA----TWSVFDLMRDYMD-GTTSSSLFEVRLGRERFGKETHAYSVAYGD 83 (365)
Q Consensus 9 ~d~~~i~~n~~~~~~~~~~~~~~i~yAvKaN~----~~~vl~~l~~~g~-g~dv~S~~El~~a~~~~~~~~i~~~~~k~~ 83 (365)
+|++.|++|++.+++..+ ++.+++--||||. ...|.+.+.+.|+ +|-|++..|....++.+....++......+
T Consensus 1 Idl~al~~N~~~ir~~~~-~~~~i~aVVKAnAYGhG~~~ia~~l~~~G~~~f~Va~i~EA~~LR~~g~~~~Ilvl~~~~~ 79 (233)
T d1bd0a2 1 VDLDAIYDNVENLRRLLP-DDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVLGASRP 79 (233)
T ss_dssp EEHHHHHHHHHHHHHHSC-TTCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCSCEEECSCCCG
T ss_pred CCHHHHHHHHHHHHHHCC-CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCEEEECCCCCC
T ss_conf 978999999999998489-9896999972234758779999999965767431653020899998277644731268760
Q ss_pred HHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHH-HHCCCEEEEEE
Q ss_conf 68999997288002189899999999725887113115677745543446678871013148999999-73690489985
Q T0515 84 NEIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVER-VMDRINGFMIH 162 (365)
Q Consensus 84 ~~i~~a~~~g~~i~iDs~~el~~i~~~~~~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~~~~~~-~~~~i~Gih~H 162 (365)
++...+.++++.+++.|.++++.+.+.. .....++|.+.++.+.++..- ....+.....+.... ....+.|+..|
T Consensus 80 ~~~~~~~~~~i~~~v~~~~~~~~~~~~~-~~~~~~~vhLkvDTGM~RlG~---~~~e~~~~~~~~~~~~~~l~i~Gi~TH 155 (233)
T d1bd0a2 80 ADAALAAQQRIALTVFRSDWLEEASALY-SGPFPIHFHLKMDTGMGRLGV---KDEEETKRIVALIERHPHFVLEGLYTH 155 (233)
T ss_dssp GGHHHHHHTTEEEEECCHHHHHHHHHHC-CCSSCEEEEEEBCSSSCSSSB---CSHHHHHHHHHHHHHSTTEEEEEEECC
T ss_pred HHHHHHHHCCCCCEEEHHHHHHHHHHHH-CCCCCEEEEEEECCCCCCCCC---CHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 7788765414642343699865566520-357524789986256666789---848989999999850666424665312
Q ss_pred ECCC-CCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 0678-767799999999999999984456516650
Q T0515 163 NNCE-NKDFGLFDRMLGEIEERFGALIARVDWVSL 196 (365)
Q Consensus 163 ~gs~-~~~~~~~~~~l~~~~~~~~~~~~~~~~idi 196 (365)
..+- ..+.....+.++++.+....+..+...+.+
T Consensus 156 la~ad~~~~~~~~~q~~~f~~~~~~l~~~~~~~h~ 190 (233)
T d1bd0a2 156 FATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHC 190 (233)
T ss_dssp CSSTTSSCCHHHHHHHHHHHHHHTTCSSCCSEEEC
T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 04777522047899999999999863265630400
No 14
>d1rcqa2 c.1.6.1 (A:8-233) Alanine racemase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=98.84 E-value=3.6e-08 Score=69.23 Aligned_cols=162 Identities=17% Similarity=0.085 Sum_probs=111.7
Q ss_pred ECHHHHHHHHHHHHHHHHCCCCEEEEEECCC----CCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCE-EECCCCCH
Q ss_conf 5589999999999999721798798720215----898999999980882677288999999970798727-70477886
Q T0515 9 IDKAKLTRNMERIAHVREKSGAKALLALKCF----ATWSVFDLMRDYMDGTTSSSLFEVRLGRERFGKETH-AYSVAYGD 83 (365)
Q Consensus 9 ~d~~~i~~n~~~~~~~~~~~~~~i~yAvKaN----~~~~vl~~l~~~g~g~dv~S~~El~~a~~~~~~~~i-~~~~~k~~ 83 (365)
+|+++|++|++.+|+.. +.+++--|||| -...|.+.+.+.+.+|-|++..|....++.|....+ +.+.....
T Consensus 1 Idl~al~~N~~~ir~~~---~~~i~aVVKanAYGhG~~~va~~l~~g~~~faVa~~~Ea~~LR~~g~~~~Ilvl~~~~~~ 77 (226)
T d1rcqa2 1 IDLQALRHNYRLAREAT---GARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIRQPILLLEGFFEA 77 (226)
T ss_dssp EEHHHHHHHHHHHHHHH---CSEEEEECHHHHHTTCHHHHHHHHTTTCSEEEESSHHHHHHHHHTTCCSCEEETTCCSSG
T ss_pred CCHHHHHHHHHHHHHCC---CCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCCCEEEECCCCCH
T ss_conf 97899999999997454---995999981335617599999999966661135541008999972999855871146877
Q ss_pred HHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHH-------HHHCCC
Q ss_conf 6899999728800218989999999972588711311567774554344667887101314899999-------973690
Q T0515 84 NEIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVE-------RVMDRI 156 (365)
Q Consensus 84 ~~i~~a~~~g~~i~iDs~~el~~i~~~~~~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~~~~~-------~~~~~i 156 (365)
++...+.+++...++.|..+++.+....... .++|.+.++.+.+ |+|+...+..+ .....+
T Consensus 78 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~--~~~vhlkiDTGM~----------RlG~~~~e~~~~~~~~~~~~~l~~ 145 (226)
T d1rcqa2 78 SELELIVAHDFWCVVHCAWQLEAIERASLAR--PLNVWLKMDSGMH----------RVGFFPEDFRAAHERLRASGKVAK 145 (226)
T ss_dssp GGHHHHHHTTEEEEECSHHHHHHHHHCCCSS--CEEEEEEBCSSSC----------SSSBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHCCCCCEECCHHHHHHHHHHHHCC--CEEEEEEEECCCC----------CCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 8999998516661544299999999974125--2268999834643----------246685888888887641344330
Q ss_pred EEEEEEECCC-CCCHHHHHHHHHHHHHHHH
Q ss_conf 4899850678-7677999999999999999
Q T0515 157 NGFMIHNNCE-NKDFGLFDRMLGEIEERFG 185 (365)
Q Consensus 157 ~Gih~H~gs~-~~~~~~~~~~l~~~~~~~~ 185 (365)
.|+..|..+- ..+.....+.++.+.+...
T Consensus 146 ~gi~tHfa~ad~~~~~~~~~Q~~~F~~~~~ 175 (226)
T d1rcqa2 146 IVMMSHFSRADELDCPRTEEQLAAFSAASQ 175 (226)
T ss_dssp EEEECCCSSTTCTTCTHHHHHHHHHHHHHT
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 000354356541011689988899999985
No 15
>d1vfsa1 b.49.2.2 (A:4-12,A:250-385) Alanine racemase {Streptomyces lavendulae [TaxId: 1914]}
Probab=94.80 E-value=0.067 Score=29.01 Aligned_cols=82 Identities=16% Similarity=0.049 Sum_probs=54.3
Q ss_pred EEECCEEEEEEEEEECC----------------CCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf 01055089999997404----------------77469998265431024201024532337799943799970666876
Q T0515 235 SITKSTTLEVTVLDTLY----------------NGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAG 298 (365)
Q Consensus 235 lva~ag~lit~V~~~k~----------------~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~C~~~ 298 (365)
+..+...|-++|+.+|. ++...+++..|+...+.+.+........ ....+.|.|..| +
T Consensus 5 ~~kpV~~lka~Ii~ir~v~~Ge~VGYg~~~~a~~~~~ia~i~iGYaDG~~r~l~~~~~V~i----~g~~~pivGrVs--M 78 (145)
T d1vfsa1 5 VYAEIMTLRASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGIPRNASGRGPVLV----AGKIRRAAGRIA--M 78 (145)
T ss_dssp EEEEEEEEEEECCEEEEECTTCEESGGGCEECSSSEEEEEECCCTTTTCCGGGTTTCEEEE----TTEEEEBCSCCC--S
T ss_pred CCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEE----CCCCCCEECCCC--C
T ss_conf 5574079998987988818979830799621788723999964334573531347852043----563453112122--5
Q ss_pred CEEECCCCCCCCCCCCEEEEECCC
Q ss_conf 354304538988977789982788
Q T0515 299 DVFGEFRFAEELKVGDRISFQDAA 322 (365)
Q Consensus 299 D~~~~~~~lp~l~~GD~l~~~~~G 322 (365)
|.+.-+..-+++++||.+.+..-.
T Consensus 79 D~~~vdv~~~~~~~Gd~V~l~G~~ 102 (145)
T d1vfsa1 79 DQFVVDLGEDLAEAGDEAVILGDA 102 (145)
T ss_dssp SCEEEEEETCCCCTTCEEEEECCG
T ss_pred CEEEEECCCCCCCCCCEEEEEECC
T ss_conf 448981588767889999998679
No 16
>d1rcqa1 b.49.2.2 (A:1-7,A:234-357) Alanine racemase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=94.56 E-value=0.12 Score=27.35 Aligned_cols=79 Identities=11% Similarity=0.099 Sum_probs=51.9
Q ss_pred CCEEEEEEEEEECC----------------CCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEE
Q ss_conf 55089999997404----------------77469998265431024201024532337799943799970666876354
Q T0515 238 KSTTLEVTVLDTLY----------------NGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAGDVF 301 (365)
Q Consensus 238 ~ag~lit~V~~~k~----------------~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~C~~~D~~ 301 (365)
.+.+|-++|+.+|+ .+...+++..|+.+.+.+.+........ ..+.+.|.|..| +|.+
T Consensus 5 ~amsl~a~ii~vr~v~~G~~VGYg~~~~a~~~~~ia~v~iGYaDG~~r~~~~~~~v~i----~g~~~pi~GrVs--MD~~ 78 (131)
T d1rcqa1 5 RALTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAADGTLVFI----DGKPGRLVGRVS--MDML 78 (131)
T ss_dssp EEEEEEEEEEEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTCCTTCCTTCEEEE----TTEEEEBCSCCC--SSCE
T ss_pred EEEEEEEEEEEEEECCCCCCCCCCCEEECCCCEEEEEEEEECCCCEEEECCCCEEEEE----CCCCCEEECCCC--CCEE
T ss_conf 5489998998999829949755698278787459999973050356451444403786----584011403454--6679
Q ss_pred ECCCC-CCCCCCCCEEEEECCC
Q ss_conf 30453-8988977789982788
Q T0515 302 GEFRF-AEELKVGDRISFQDAA 322 (365)
Q Consensus 302 ~~~~~-lp~l~~GD~l~~~~~G 322 (365)
.-+.. .|++++||.+.+++-.
T Consensus 79 ~idv~~~~~~~~Gd~V~l~G~~ 100 (131)
T d1rcqa1 79 TVDLTDHPQAGLGSRVELWGPN 100 (131)
T ss_dssp EEECTTCTTCCTTCEEEEESSS
T ss_pred EEECCCCCCCCCCCEEEEECCC
T ss_conf 9987887307999999997999
No 17
>d1bd0a1 b.49.2.2 (A:2-11,A:245-382) Alanine racemase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=86.20 E-value=0.99 Score=21.50 Aligned_cols=76 Identities=13% Similarity=0.102 Sum_probs=48.3
Q ss_pred CCEEEEEEEEEECC----------------CCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEE
Q ss_conf 55089999997404----------------77469998265431024201024532337799943799970666876354
Q T0515 238 KSTTLEVTVLDTLY----------------NGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAGDVF 301 (365)
Q Consensus 238 ~ag~lit~V~~~k~----------------~~~~~~i~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~C~~~D~~ 301 (365)
++.+|-++|+.+|. .+...+++..|+...+.+.+.. .. ... ..+.+.|.|..| +|.+
T Consensus 9 ~~lsl~a~Ii~ir~l~~G~~VGYg~~~~a~~~~~ia~vpiGYaDG~~r~ls~-~~-vli---~G~~~piiGrIs--MD~~ 81 (148)
T d1bd0a1 9 AEFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQH-FH-VLV---DGQKAPIVGRIC--MDQC 81 (148)
T ss_dssp EEEEEEEECSEEEEECTTCEESGGGCEECCSSEEEEEESCCGGGTCCGGGGG-CE-EEE---TTEEEEEESCCC--SSCE
T ss_pred CCEEEEEEEEEEEEECCCCCCCCCCEEECCCCEEEEEEEEECCCCCCHHHHC-CC-CCC---CCCCCCCCCCCC--CCEE
T ss_conf 1089999926988737999311662897554437999976200474311001-43-323---562254126202--4279
Q ss_pred ECCCCCCCCCCCCEEEEECC
Q ss_conf 30453898897778998278
Q T0515 302 GEFRFAEELKVGDRISFQDA 321 (365)
Q Consensus 302 ~~~~~lp~l~~GD~l~~~~~ 321 (365)
.-+..- ++++||.+.+..-
T Consensus 82 ~VDv~~-~~~iGd~V~l~G~ 100 (148)
T d1bd0a1 82 MIRLPG-PLPVGTKVTLIGR 100 (148)
T ss_dssp EEECSS-CCCTTCEEEEEEE
T ss_pred EEECCC-CCCCCCEEEEECC
T ss_conf 994579-9899999999778
No 18
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]}
Probab=74.54 E-value=2.5 Score=18.94 Aligned_cols=184 Identities=9% Similarity=-0.084 Sum_probs=97.1
Q ss_pred HHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCC---EEE----ECHHHHHHH-HH--CCCCCCEEECCCCCHHHHHHHH
Q ss_conf 9999721798798720215898999999980882---677----288999999-97--0798727704778866899999
Q T0515 21 IAHVREKSGAKALLALKCFATWSVFDLMRDYMDG---TTS----SSLFEVRLG-RE--RFGKETHAYSVAYGDNEIDEVV 90 (365)
Q Consensus 21 ~~~~~~~~~~~i~yAvKaN~~~~vl~~l~~~g~g---~dv----~S~~El~~a-~~--~~~~~~i~~~~~k~~~~i~~a~ 90 (365)
+|+.+..-...+---++ -++|.+.+.+...|+- +|. .+..++... +. ..+...++.-|.-.+..+..++
T Consensus 7 lk~~l~~g~~~~G~~~~-~~~p~~~ei~a~~G~Dfv~iD~EHg~~~~~~~~~~i~a~~~~g~~~~VRvp~~~~~~i~~~L 85 (253)
T d1dxea_ 7 FKAALAAKQVQIGCWSA-LSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLL 85 (253)
T ss_dssp HHHHHHTTCCEEEEEEC-SCSHHHHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTTCSSEEEEECSSSCHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEC-CCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHH
T ss_conf 99999879987998864-89979999997089899998236687875677789999855699724207878789999998
Q ss_pred HCCCE-E---CCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 72880-0---2189899999999725887113115677745543446678871013148999999736904899850678
Q T0515 91 SHADK-I---IFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMDRINGFMIHNNCE 166 (365)
Q Consensus 91 ~~g~~-i---~iDs~~el~~i~~~~~~~~v~iRi~p~~~~~~~~~~~~~~~~~kfg~~~~~~~~~~~~~i~Gih~H~gs~ 166 (365)
+.|+. + .++|.+|.+++.+.++=.+.+.|- +.... ....++ ...+..+....++. +.-|
T Consensus 86 D~Ga~GIivP~v~s~eea~~~v~~~~ypP~G~Rg---~~~~~--------~~~~~~-~~~~~~~~~n~~~~-----vi~~ 148 (253)
T d1dxea_ 86 DIGFYNFLIPFVETKEEAELAVASTRYPPEGIRG---VSVSH--------RANMFG-TVADYFAQSNKNIT-----ILVQ 148 (253)
T ss_dssp HTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCC---CCSSS--------GGGGGG-TSTTHHHHHTTSCE-----EEEE
T ss_pred HCCCCEEEECCCCCHHHHHHHHHHHEECCCCCCC---CCCCE--------ECCCCC-CCCCCCCCCCCCEE-----EEEE
T ss_conf 4696689730259999999999962359999867---67430--------012246-43210112466568-----8752
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCEEEECC-------CCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 76779999999999999998445651665047-------778988897889999999998612660899
Q T0515 167 NKDFGLFDRMLGEIEERFGALIARVDWVSLGG-------GIHFTGDDYPVDAFSARLRAFSDRYGVQIY 228 (365)
Q Consensus 167 ~~~~~~~~~~l~~~~~~~~~~~~~~~~idiGG-------G~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 228 (365)
+++.+.... +.+++. -+-++.+-+|- |++..+.+..+....+.+.+.+++++...-
T Consensus 149 IEt~~av~n----leeI~a--v~giD~i~iGp~DLs~slG~~g~~~~p~v~~ai~~v~~~~~~~gk~~g 211 (253)
T d1dxea_ 149 IESQQGVDN----VDAIAA--TEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSG 211 (253)
T ss_dssp ECSHHHHHT----HHHHHT--STTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHH----HHHHHC--CCCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 256789987----888733--479756997257577643678887890689999999999998499768
No 19
>g1uhe.1 b.52.2.1 (B:,A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Helicobacter pylori [TaxId: 210]}
Probab=59.32 E-value=5 Score=17.00 Aligned_cols=67 Identities=21% Similarity=0.230 Sum_probs=43.6
Q ss_pred CCCCCCCCEEEEEEECCCCCCCEEECC-CCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECCCEEEE
Q ss_conf 337799943799970666876354304-53898897778998278845513213678867880899977880899
Q T0515 278 KVLPNEGSHSYMICGKSCLAGDVFGEF-RFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRT 351 (365)
Q Consensus 278 ~~~~~~~~~~~~i~G~~C~~~D~~~~~-~~lp~l~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v~~~~dg~~~~ 351 (365)
...+.+...+|.|-|+- |+ .++-+ -.-...++||.|++..-+-+......+| .|.++++++++.+.-
T Consensus 47 N~~NG~Rf~TYvI~g~~--sg-~I~lNGAAA~~~~~GD~vII~sy~~~~~~e~~~~----~P~vv~~d~~N~i~~ 114 (121)
T g1uhe.1 47 DVNNGERFSTYVILGKK--RG-EICVNGAAARKVAIGDVVIILAYASMNEDEINAH----KPSIVLVDEKNEILE 114 (121)
T ss_dssp ETTTCCEEEEECEEECS--TT-CEEEEGGGGGGCCTTCEEEEEEEEEECHHHHHHC----CCEEEEECTTSCEEE
T ss_pred ECCCCEEEEEEEEECCC--CC-EEEECCHHHEECCCCCEEEEEECCCCCHHHHHCC----CCEEEEECCCCCEEE
T ss_conf 99899388768984388--88-7985585642348999999998264798998348----877999999997842
No 20
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=56.37 E-value=5.6 Score=16.68 Aligned_cols=82 Identities=15% Similarity=0.041 Sum_probs=42.9
Q ss_pred HHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHH---HHHHHCCCCCEEEECCCC-CCCCC-CCCHHHHHHHHHH---H
Q ss_conf 99997369048998506787677999999999999---999844565166504777-89888-9788999999999---8
Q T0515 148 KVERVMDRINGFMIHNNCENKDFGLFDRMLGEIEE---RFGALIARVDWVSLGGGI-HFTGD-DYPVDAFSARLRA---F 219 (365)
Q Consensus 148 ~~~~~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~---~~~~~~~~~~~idiGGG~-~~~~~-~~~~~~~~~~i~~---~ 219 (365)
.....+..+.+++...+-...+.+...+.++.+.. ....++.+ .|-+..|. +.... +..+....+.+++ .
T Consensus 54 ~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 131 (278)
T d1i60a_ 54 YFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVK--YVVAVPLVTEQKIVKEEIKKSSVDVLTELSDI 131 (278)
T ss_dssp HHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCC--EEEEECCBCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9998699189975677778899899999999999999999974998--45566666888877799999999999999999
Q ss_pred HHCCCEEEEEEC
Q ss_conf 612660899971
Q T0515 220 SDRYGVQIYLEP 231 (365)
Q Consensus 220 ~~~~~~~l~~Ep 231 (365)
.++.|+++.+||
T Consensus 132 a~~~Gv~l~lE~ 143 (278)
T d1i60a_ 132 AEPYGVKIALEF 143 (278)
T ss_dssp HGGGTCEEEEEC
T ss_pred HHHHCCEEEEEE
T ss_conf 997398246431
No 21
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=51.49 E-value=6.7 Score=16.19 Aligned_cols=67 Identities=6% Similarity=-0.050 Sum_probs=37.2
Q ss_pred EEEEECCCCCHHHHHHHHHCCC-CEEEE--CHHHHH---HHHHCCCCCCEEECCCCCHHHHHHHHHCCCEECC
Q ss_conf 9872021589899999998088-26772--889999---9997079872770477886689999972880021
Q T0515 32 ALLALKCFATWSVFDLMRDYMD-GTTSS--SLFEVR---LGRERFGKETHAYSVAYGDNEIDEVVSHADKIIF 98 (365)
Q Consensus 32 i~yAvKaN~~~~vl~~l~~~g~-g~dv~--S~~El~---~a~~~~~~~~i~~~~~k~~~~i~~a~~~g~~i~i 98 (365)
+....+......+.+++.+.|. -+|+. ++.=++ ...+.+|+-.+=.|...+.+.++.+++.|+.+.+
T Consensus 20 vlr~~~~~~a~~~~~al~~~Gi~~iEitl~tp~a~~~I~~l~~~~p~~~vGaGTV~~~~~~~~a~~aGa~Fiv 92 (213)
T d1wbha1 20 VIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAI 92 (213)
T ss_dssp EECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEE
T ss_pred EEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCEEE
T ss_conf 9978999999999999998799889993798259999999999789871522304638999999977992997
No 22
>d1ct5a_ c.1.6.2 (A:) "Hypothetical" protein ybl036c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=47.73 E-value=7.6 Score=15.81 Aligned_cols=175 Identities=14% Similarity=0.103 Sum_probs=90.4
Q ss_pred ECHHH---HHHHHHHHHHHHHC-----------CCCEEEEEECCCCCHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCC
Q ss_conf 55899---99999999999721-----------79879872021589899999998088-26772889999999707987
Q T0515 9 IDKAK---LTRNMERIAHVREK-----------SGAKALLALKCFATWSVFDLMRDYMD-GTTSSSLFEVRLGRERFGKE 73 (365)
Q Consensus 9 ~d~~~---i~~n~~~~~~~~~~-----------~~~~i~yAvKaN~~~~vl~~l~~~g~-g~dv~S~~El~~a~~~~~~~ 73 (365)
||++. |..|++.+++-... ..+++.-..|.-|...|. .+.++|. .|.=.-..|+..=....+.+
T Consensus 5 ~d~~r~~ei~~~~~~i~~~I~~~~~~~~~~r~~~~V~LiaVsK~~~~~~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~ 83 (244)
T d1ct5a_ 5 YDEDRKTQLIAQYESVREVVNAEAKNVHVNENASKILLLVVSKLKPASDIQ-ILYDHGVREFGENYVQELIEKAKLLPDD 83 (244)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTC-------CCEEEEECTTSCHHHHH-HHHHHTCCEEEECCHHHHHHHHHHSCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH-HHHHCCCCHHHCCHHHHHHHHCCCCCCC
T ss_conf 877999999999999999999998876538997866999998999999999-9998498612004045565420123220
Q ss_pred --CEEECCCCCHHHHHHHHHCC-C-EE-CCCCHHHHHHHHHHHCC-------CCCEEECCCCCCCCCCCCCCCCCCCHHC
Q ss_conf --27704778866899999728-8-00-21898999999997258-------8711311567774554344667887101
Q T0515 74 --THAYSVAYGDNEIDEVVSHA-D-KI-IFNSISQLERFADKAAG-------IARGLRLNPQVSSSSFDLADPARPFSRL 141 (365)
Q Consensus 74 --~i~~~~~k~~~~i~~a~~~g-~-~i-~iDs~~el~~i~~~~~~-------~~v~iRi~p~~~~~~~~~~~~~~~~~kf 141 (365)
-+|.|+. -.+.++.++..- + .| ++||+.-++++.+.+.. ..+.+.||.. +..+|.
T Consensus 84 i~wHfIG~L-QsNKvk~i~~~~~~~~I~svds~kla~~l~~~~~~~~~~~~~~~~~iQVNi~------------~e~~Ks 150 (244)
T d1ct5a_ 84 IKWHFIGGL-QTNKCKDLAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTS------------HEDQKS 150 (244)
T ss_dssp CEEEECSCC-CGGGHHHHHHCTTEEEEEEECSHHHHHHHHHHHHHHCTTSCCEEEEEEBCCS------------SSCCSS
T ss_pred EEEEEECCC-CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECC------------CCCCCC
T ss_conf 121222455-5123999997336433331000120467778876531135762267765136------------666667
Q ss_pred CCC----HHHHHHHH------HCCCEEEEEEEC---CCC-CCHHHHHHHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 314----89999997------369048998506---787-677999999999999999844565166504
Q T0515 142 GEW----DVPKVERV------MDRINGFMIHNN---CEN-KDFGLFDRMLGEIEERFGALIARVDWVSLG 197 (365)
Q Consensus 142 g~~----~~~~~~~~------~~~i~Gih~H~g---s~~-~~~~~~~~~l~~~~~~~~~~~~~~~~idiG 197 (365)
|+. +.+..... ++++.|+..-.- +.. ..+...-+.+..+...+.........|.+|
T Consensus 151 G~~~~~~l~~~~~~~~~~~~~~l~l~GLM~i~p~~~~~~~~~~~~~F~~l~~l~~~l~~~~~~~~~LSMG 220 (244)
T d1ct5a_ 151 GLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGTSLKLSMG 220 (244)
T ss_dssp SBCCHHHHHHHHHHHHSTTCCSEEEEEEECCCCCC---------HHHHHHHHHHHHHHHHHCCCCEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECH
T ss_conf 8795789999999999975562102054333467888034578899999999999983537997977175
No 23
>d1ppya_ b.52.2.1 (A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Escherichia coli [TaxId: 562]}
Probab=45.39 E-value=8.3 Score=15.58 Aligned_cols=67 Identities=16% Similarity=0.102 Sum_probs=42.1
Q ss_pred CCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECCCEEE
Q ss_conf 377999437999706668763543045389889777899827884551321367886788089997788089
Q T0515 279 VLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVR 350 (365)
Q Consensus 279 ~~~~~~~~~~~i~G~~C~~~D~~~~~~~lp~l~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v~~~~dg~~~ 350 (365)
..+.+...+|.|-|+-= |+.+-...-.-...++||.|+|..-+-+......+| .|.++++++++.+.
T Consensus 49 v~NG~Rf~TYvI~g~~g-Sg~I~lNGaAAr~~~~GD~vII~sya~~~~~e~~~~----~P~vv~~d~~N~i~ 115 (118)
T d1ppya_ 49 VTNGKRFSTYAIAAERG-SRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTW----RPNVAYFEGDNEMK 115 (118)
T ss_dssp TTTCCEEEEEEEEECTT-CCCEECTTTTGGGCCTTCEEEEEEEEEEEHHHHHTC----CCEEEEEETTTEEE
T ss_pred CCCCCEEEEEEEECCCC-CCEEEECCHHHEECCCCCEEEEEECCCCCHHHHHCC----CCEEEEECCCCCEE
T ss_conf 99993899899875789-877996683431549999999998553798897248----97799999999887
No 24
>d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]}
Probab=43.51 E-value=8.9 Score=15.40 Aligned_cols=34 Identities=9% Similarity=-0.007 Sum_probs=18.0
Q ss_pred HHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9997369048998506787677999999999999
Q T0515 149 VERVMDRINGFMIHNNCENKDFGLFDRMLGEIEE 182 (365)
Q Consensus 149 ~~~~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~ 182 (365)
+...+..-..+.+-.|-...+.+.|.+.++.+.+
T Consensus 195 ~r~~g~~~vn~DLI~GlPgqT~~~~~~tl~~~~~ 228 (441)
T d1olta_ 195 AREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAE 228 (441)
T ss_dssp HHHTTCCSCEEEEEESCTTCCHHHHHHHHHHHHH
T ss_pred HHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 7741442362354432377603778899989985
No 25
>d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase molybdoprotein {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]}
Probab=43.50 E-value=8.9 Score=15.40 Aligned_cols=14 Identities=29% Similarity=0.226 Sum_probs=6.1
Q ss_pred EEEEE-CCCEEEEEE
Q ss_conf 89997-788089998
Q T0515 340 IAIRE-LDGSVRTVR 353 (365)
Q Consensus 340 ~v~~~-~dg~~~~ir 353 (365)
+|=++ +.|++++.|
T Consensus 519 eVeVD~~TG~v~v~r 533 (663)
T d1n62b2 519 IMDIDVDTGVAKTRR 533 (663)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCEEEEEE
T ss_conf 999986757489979
No 26
>d2z1ca1 b.40.14.1 (A:2-72) Hydrogenase expression/formation protein HypC {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=41.16 E-value=7.8 Score=15.74 Aligned_cols=16 Identities=19% Similarity=0.327 Sum_probs=13.0
Q ss_pred CCCCCCCCCCEEEEEC
Q ss_conf 5389889777899827
Q T0515 305 RFAEELKVGDRISFQD 320 (365)
Q Consensus 305 ~~lp~l~~GD~l~~~~ 320 (365)
.++|++++|||+.++.
T Consensus 30 ~lv~e~~vGDyVLVh~ 45 (71)
T d2z1ca1 30 DLMPDTKPGDWVIVHT 45 (71)
T ss_dssp TTSTTCCTTCEEEEET
T ss_pred EEECCCCCCCEEEEEE
T ss_conf 7308999998999960
No 27
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=39.85 E-value=10 Score=15.04 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=24.4
Q ss_pred HCCCCCCCCCEEEEEECCCEEEEEEE----CCHHHHHHHC
Q ss_conf 13678867880899977880899983----6879998734
Q T0515 329 KNWFNGVKMPAIAIRELDGSVRTVRE----FTYADYEQSL 364 (365)
Q Consensus 329 ~s~fn~~~~p~~v~~~~dg~~~~ir~----~~~~d~~~~~ 364 (365)
+..|.....|..++++.||.++.+.+ .+.+++..++
T Consensus 92 ~~~~~v~~~P~~~lid~~G~i~~v~~~~g~~~~~~l~~~l 131 (134)
T d1lu4a_ 92 WARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRV 131 (134)
T ss_dssp HHHTTCCSSSEEEEECTTSCEEEECCSSSCCCHHHHHHHH
T ss_pred HHHCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHH
T ss_conf 9983998277899990898599982667878999999999
No 28
>d2f9ha1 b.161.1.1 (A:3-123) PTS system, IIa component (PTSIIA) {Enterococcus faecalis [TaxId: 1351]} SCOP: d2f9hb1
Probab=36.38 E-value=11 Score=14.70 Aligned_cols=24 Identities=13% Similarity=0.290 Sum_probs=20.1
Q ss_pred CCCCEEECCCCCCCCCCCCEEEEE
Q ss_conf 876354304538988977789982
Q T0515 296 LAGDVFGEFRFAEELKVGDRISFQ 319 (365)
Q Consensus 296 ~~~D~~~~~~~lp~l~~GD~l~~~ 319 (365)
.++++......+|++++||.|.|.
T Consensus 97 lpG~i~v~~~~~P~i~vG~~I~~i 120 (121)
T d2f9ha1 97 IRNGVYLTPHQLPKITIGTTIDYL 120 (121)
T ss_dssp CTTEEEEESCSCCCCCTTCEEEEE
T ss_pred CCCEEEECCCCCCCEECCCEEEEE
T ss_conf 776278458878843338389987
No 29
>d2f9ha1 b.161.1.1 (A:3-123) PTS system, IIa component (PTSIIA) {Enterococcus faecalis [TaxId: 1351]}
Probab=36.02 E-value=12 Score=14.66 Aligned_cols=25 Identities=12% Similarity=0.279 Sum_probs=20.4
Q ss_pred CCCCCEEECCCCCCCCCCCCEEEEE
Q ss_conf 6876354304538988977789982
Q T0515 295 CLAGDVFGEFRFAEELKVGDRISFQ 319 (365)
Q Consensus 295 C~~~D~~~~~~~lp~l~~GD~l~~~ 319 (365)
|.++++......+|++++||.|.|.
T Consensus 96 ~lpG~i~v~~~~~P~i~vG~~I~~i 120 (121)
T d2f9ha1 96 VIRNGVYLTPHQLPKITIGTTIDYL 120 (121)
T ss_dssp SCTTEEEEESCSCCCCCTTCEEEEE
T ss_pred CCCCEEEECCCCCCCCCCCCEEEEE
T ss_conf 7898699867889978889999996
No 30
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]}
Probab=35.09 E-value=12 Score=14.57 Aligned_cols=100 Identities=6% Similarity=0.001 Sum_probs=61.5
Q ss_pred HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCC---EEE----ECHHHHHHH---H-HCC--CCCCEEECCCCCHHHH
Q ss_conf 99999721798798720215898999999980882---677----288999999---9-707--9872770477886689
Q T0515 20 RIAHVREKSGAKALLALKCFATWSVFDLMRDYMDG---TTS----SSLFEVRLG---R-ERF--GKETHAYSVAYGDNEI 86 (365)
Q Consensus 20 ~~~~~~~~~~~~i~yAvKaN~~~~vl~~l~~~g~g---~dv----~S~~El~~a---~-~~~--~~~~i~~~~~k~~~~i 86 (365)
++|+.+...+-...=..=+-|++.+.+.+...|+- +|. .+..++... . ..+ +...++.-|...+..|
T Consensus 30 ~l~~~~~~~~~~~~G~~~~~~s~~~~e~~a~~g~D~v~iD~EHg~~~~~~~~~~i~a~~~~~~~~~~~iVRvp~~~~~~I 109 (299)
T d1izca_ 30 ALKDAMADPSKTLMGVAHGIPSTFVTKVLAATKPDFVWIDVEHGMFNRLELHDAIHAAQHHSEGRSLVIVRVPKHDEVSL 109 (299)
T ss_dssp HHHHHHHCGGGCEEEEEECSCCHHHHHHHHHTCCSEEEEETTTSCCCHHHHHHHHHHHHHHTTTCSEEEEECCTTCHHHH
T ss_pred HHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
T ss_conf 99998645688136420207988999999749989999857889999999999999999847899974896898876799
Q ss_pred HHHHHCCCE-E---CCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 999972880-0---21898999999997258871131
Q T0515 87 DEVVSHADK-I---IFNSISQLERFADKAAGIARGLR 119 (365)
Q Consensus 87 ~~a~~~g~~-i---~iDs~~el~~i~~~~~~~~v~iR 119 (365)
..+++.|+. + .++|.+|++.+.+.++=.+.+.|
T Consensus 110 ~~~LD~Ga~GIivP~V~s~eea~~~v~~~rypP~G~R 146 (299)
T d1izca_ 110 STALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRR 146 (299)
T ss_dssp HHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCC
T ss_pred HHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 9999748684445610659999999984112238975
No 31
>d1d4ba_ d.15.2.1 (A:) Cell death-inducing effector B (CIDE-B), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.41 E-value=11 Score=14.68 Aligned_cols=26 Identities=23% Similarity=0.171 Sum_probs=18.0
Q ss_pred CCCCCEEEEEECCCEEEEEEECCHHHHHHHC
Q ss_conf 8678808999778808999836879998734
Q T0515 334 GVKMPAIAIRELDGSVRTVREFTYADYEQSL 364 (365)
Q Consensus 334 ~~~~p~~v~~~~dg~~~~ir~~~~~d~~~~~ 364 (365)
..+.|-.+++++||.. -..||||++|
T Consensus 68 ~i~~~~~lvLeeDGT~-----Vd~EeYFqtL 93 (122)
T d1d4ba_ 68 LLNGVLTLVLEEDGTA-----VDSEDFFQLL 93 (122)
T ss_dssp SCCSSCEEEETTTTEE-----ECSTHHHHHS
T ss_pred CCCCCEEEEEECCCCE-----ECCHHHHHCC
T ss_conf 9998738999479979-----8742676426
No 32
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=34.05 E-value=12 Score=14.46 Aligned_cols=91 Identities=10% Similarity=0.011 Sum_probs=51.4
Q ss_pred HHHHHHHHHHCCCC-EEEEEECCCCCHHHHHHHHHCCC-CEEEE--CHHHHHHH---HHCCCCCCEEECCCCCHHHHHHH
Q ss_conf 99999999721798-79872021589899999998088-26772--88999999---97079872770477886689999
Q T0515 17 NMERIAHVREKSGA-KALLALKCFATWSVFDLMRDYMD-GTTSS--SLFEVRLG---RERFGKETHAYSVAYGDNEIDEV 89 (365)
Q Consensus 17 n~~~~~~~~~~~~~-~i~yAvKaN~~~~vl~~l~~~g~-g~dv~--S~~El~~a---~~~~~~~~i~~~~~k~~~~i~~a 89 (365)
...++.+.+...++ -+...........+.+++.+.|+ .+|+. ++.=++.. ++.+|+-.+=.|...+.+.++.+
T Consensus 6 ~~~~i~~~l~~~~iipvl~~~~~~~a~~~~~al~~~Gi~~iEitl~~p~a~~~i~~l~~~~p~~~vGaGTV~~~~~~~~a 85 (216)
T d1mxsa_ 6 KAARIDAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAV 85 (216)
T ss_dssp HHHHHHHHHHHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHH
T ss_pred HHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHH
T ss_conf 89999999986997999978999999999999998799889996798069999999998489752311001208889999
Q ss_pred HHCCCEECC--CCHHHHHHH
Q ss_conf 972880021--898999999
Q T0515 90 VSHADKIIF--NSISQLERF 107 (365)
Q Consensus 90 ~~~g~~i~i--Ds~~el~~i 107 (365)
++.|+.+.+ ..-.|+-..
T Consensus 86 ~~aGa~FivsP~~~~~v~~~ 105 (216)
T d1mxsa_ 86 EAAGAQFVVTPGITEDILEA 105 (216)
T ss_dssp HHHTCSSEECSSCCHHHHHH
T ss_pred HHCCCCEEECCCCCHHHHHH
T ss_conf 86799899789984999999
No 33
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=32.29 E-value=13 Score=14.28 Aligned_cols=67 Identities=6% Similarity=-0.147 Sum_probs=37.6
Q ss_pred EEEEECCCCCHHHHHHHHHCCC-CEEEEC--HHHHHH---HHHCCCCCCEEECCCCCHHHHHHHHHCCCEECC
Q ss_conf 9872021589899999998088-267728--899999---997079872770477886689999972880021
Q T0515 32 ALLALKCFATWSVFDLMRDYMD-GTTSSS--LFEVRL---GRERFGKETHAYSVAYGDNEIDEVVSHADKIIF 98 (365)
Q Consensus 32 i~yAvKaN~~~~vl~~l~~~g~-g~dv~S--~~El~~---a~~~~~~~~i~~~~~k~~~~i~~a~~~g~~i~i 98 (365)
+...........+.+++.+.|. -+|+.- ++=++. ..+.+|+-.+=.|...+.++++.+++.|+.+.+
T Consensus 19 vlr~~~~~~~~~~~~al~~~Gi~~iEitl~~~~a~~~I~~l~~~~p~~~vGaGTV~~~~~~~~a~~aGa~Fiv 91 (212)
T d1vhca_ 19 VIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVV 91 (212)
T ss_dssp EECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred EEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
T ss_conf 9968999999999999998799889995788158999999986288734766314658999999861786897
No 34
>d2ot2a1 b.40.14.1 (A:1-90) Hydrogenase expression/formation protein HypC {Escherichia coli [TaxId: 562]}
Probab=31.27 E-value=11 Score=14.69 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=12.1
Q ss_pred CCCCCCCCCCEEEEEC
Q ss_conf 5389889777899827
Q T0515 305 RFAEELKVGDRISFQD 320 (365)
Q Consensus 305 ~~lp~l~~GD~l~~~~ 320 (365)
-..|++++|||+.++.
T Consensus 37 ~~~~e~~vGDyVLVH~ 52 (90)
T d2ot2a1 37 DENGQPRVGQWVLVHV 52 (90)
T ss_dssp CTTSCBCTTCEEEEET
T ss_pred CCCCCCCCCCEEEEEH
T ss_conf 6776468788999952
No 35
>d1ffvb2 d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydrogenase molybdoprotein {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=29.03 E-value=15 Score=13.93 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=7.7
Q ss_pred EEEEEE-CCCEEEEEEE
Q ss_conf 089997-7880899983
Q T0515 339 AIAIRE-LDGSVRTVRE 354 (365)
Q Consensus 339 ~~v~~~-~dg~~~~ir~ 354 (365)
++|=++ +.|++++.|-
T Consensus 512 ~eVeVD~~TG~v~V~r~ 528 (657)
T d1ffvb2 512 CVVDIDRATGETKVRRF 528 (657)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred EEEEEEECCCCEEEEEE
T ss_conf 99999823697798099
No 36
>d1leha2 c.58.1.1 (A:1-134) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}
Probab=24.18 E-value=15 Score=14.00 Aligned_cols=57 Identities=12% Similarity=0.066 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHCC--CCCEEEECCCCCCCC---CCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEC
Q ss_conf 999999999998445--651665047778988---8978899999999986126608999716200105
Q T0515 175 RMLGEIEERFGALIA--RVDWVSLGGGIHFTG---DDYPVDAFSARLRAFSDRYGVQIYLEPGEASITK 238 (365)
Q Consensus 175 ~~l~~~~~~~~~~~~--~~~~idiGGG~~~~~---~~~~~~~~~~~i~~~~~~~~~~l~~EpGR~lva~ 238 (365)
.++.++..+...+-. .+--+.+|||=.+-. ....-+++...+.+++.+. +|+|+.++
T Consensus 53 ~al~dvlrLA~~MT~K~ala~lp~GGgK~vI~~dp~~~~~~el~r~~~~~v~~L-------~g~yi~a~ 114 (134)
T d1leha2 53 EAIEDALRLARGMTYKNAAAGLNLGGGKTVIIGDPFADKNEDMFRALGRFIQGL-------NGRYITAE 114 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCEEEEEEEESCTTTTCCHHHHHHHHHHHHTT-------TTSEEBCB
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHC-------CCCEECCC
T ss_conf 999999999999788776417888885565545988899999999999999857-------99688169
No 37
>d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase molybdoprotein {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} SCOP: d1zxib2 d1ffvb2 d1t3qb2
Probab=21.61 E-value=21 Score=13.05 Aligned_cols=16 Identities=25% Similarity=0.127 Sum_probs=7.4
Q ss_pred EEEEEE-CCCEEEEEEE
Q ss_conf 089997-7880899983
Q T0515 339 AIAIRE-LDGSVRTVRE 354 (365)
Q Consensus 339 ~~v~~~-~dg~~~~ir~ 354 (365)
++|-++ +.|++++.|-
T Consensus 518 ~eVeVD~~TG~v~v~~~ 534 (663)
T d1n62b2 518 CIMDIDVDTGVAKTRRF 534 (663)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred EEEEEEECCCCEEEEEE
T ss_conf 99999606883799999
No 38
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=21.20 E-value=21 Score=12.99 Aligned_cols=50 Identities=10% Similarity=-0.097 Sum_probs=26.8
Q ss_pred ECHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCEE--CCCCHHHHHHHHH
Q ss_conf 288999999970798727704778866899999728800--2189899999999
Q T0515 58 SSLFEVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKI--IFNSISQLERFAD 109 (365)
Q Consensus 58 ~S~~El~~a~~~~~~~~i~~~~~k~~~~i~~a~~~g~~i--~iDs~~el~~i~~ 109 (365)
-+..+++.+...|.+=+ .+|+..++-++.+.++++.+ -+-+.+|+.+-.+
T Consensus 70 ~~~~~~~~a~~aGa~fi--vsP~~~~~v~~~~~~~~i~~iPGv~TpsEi~~A~~ 121 (202)
T d1wa3a1 70 TSVEQCRKAVESGAEFI--VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMK 121 (202)
T ss_dssp CSHHHHHHHHHHTCSEE--ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEE--ECCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHH
T ss_conf 33789999986056477--47877399999998659956178186889999997
No 39
>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]} SCOP: d2paha_ d1mmka_ d1mmta_ d3paha_ d1kw0a_ d1tdwa_ d1phza2 d1toha_ d2toha_ d1mlwa_
Probab=20.93 E-value=5.9 Score=16.51 Aligned_cols=16 Identities=13% Similarity=0.328 Sum_probs=7.8
Q ss_pred HHHHHHCCCEEEEEECCC
Q ss_conf 999861266089997162
Q T0515 216 LRAFSDRYGVQIYLEPGE 233 (365)
Q Consensus 216 i~~~~~~~~~~l~~EpGR 233 (365)
+-.+.-|+| |+-|.|-
T Consensus 207 lYWfTVEFG--Li~e~g~ 222 (307)
T d1j8ua_ 207 IYWFTVEFG--LCKQGDS 222 (307)
T ss_dssp HHHHTTTTC--EEEETTE
T ss_pred HEEEEEEEE--EEECCCC
T ss_conf 212022555--4524997
No 40
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]}
Probab=20.81 E-value=18 Score=13.43 Aligned_cols=23 Identities=13% Similarity=0.247 Sum_probs=9.6
Q ss_pred EEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 48998506787677999999999
Q T0515 157 NGFMIHNNCENKDFGLFDRMLGE 179 (365)
Q Consensus 157 ~Gih~H~gs~~~~~~~~~~~l~~ 179 (365)
.|++.|.+.+..+.+.+.+.++.
T Consensus 210 IG~Q~H~~~~~p~~~~~~~~l~~ 232 (346)
T d1w32a_ 210 VGFQMHVMNDYPSIANIRQAMQK 232 (346)
T ss_dssp EEECCEEESSSSCHHHHHHHHHH
T ss_pred EEEEEECCCCCCCHHHHHHHHHH
T ss_conf 78874215789998999999999
Done!