Query T0522 NP_384335.1, SINORHIZOBIUM MELILOTI 1021, 134 residues
Match_columns 134
No_of_seqs 115 out of 1096
Neff 6.9
Searched_HMMs 15564
Date Fri May 21 18:04:02 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0522.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0522.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2oika1 d.13.1.1 (A:6-144) His 100.0 3.7E-29 2.4E-33 206.4 8.6 120 15-134 15-134 (139)
2 d1fita_ d.13.1.1 (A:) FHIT (fr 99.9 1.3E-25 8.3E-30 183.6 9.4 132 3-134 1-145 (146)
3 d1fita_ d.13.1.1 (A:) FHIT (fr 99.9 3.7E-25 2.4E-29 180.6 10.1 120 15-134 13-145 (146)
4 d1y23a_ d.13.1.1 (A:) Hit {Bac 99.9 1.5E-24 9.5E-29 176.7 9.2 120 13-134 14-138 (139)
5 d1emsa1 d.13.1.1 (A:281-440) N 99.9 5.2E-24 3.3E-28 173.2 10.7 119 16-134 31-160 (160)
6 d1kpfa_ d.13.1.1 (A:) Protein 99.7 8E-17 5.2E-21 126.9 8.5 92 13-106 13-109 (111)
7 d1xqua_ d.13.1.1 (A:) Putative 99.6 1.6E-16 1E-20 125.0 6.7 89 14-102 16-110 (113)
8 d1z84a2 d.13.1.2 (A:196-351) G 99.6 1.6E-15 1E-19 118.6 9.0 116 11-132 27-152 (156)
9 d1guqa2 d.13.1.2 (A:178-348) G 99.6 6.3E-16 4.1E-20 121.2 5.3 120 10-132 29-160 (171)
10 d1vlra1 d.13.1.3 (A:146-337) m 97.7 3.5E-05 2.2E-09 52.0 6.2 69 31-99 66-138 (192)
11 d2pofa1 d.13.1.4 (A:31-250) CD 93.4 0.032 2.1E-06 32.9 3.2 83 12-96 23-114 (220)
12 d1z84a1 d.13.1.2 (A:23-195) Ga 85.5 0.69 4.4E-05 24.3 4.6 58 37-97 104-169 (173)
13 d1guqa1 d.13.1.2 (A:2-177) Gal 79.9 1.9 0.00013 21.4 5.2 61 37-97 107-170 (176)
14 d1r2ra_ c.1.1.1 (A:) Triosepho 45.3 9.4 0.00061 17.0 3.1 28 107-134 163-190 (246)
15 d1b9ba_ c.1.1.1 (A:) Triosepho 41.8 12 0.00074 16.5 3.1 28 107-134 167-194 (252)
16 d1neya_ c.1.1.1 (A:) Triosepho 40.7 12 0.00077 16.4 3.0 28 107-134 164-191 (247)
17 d1m6ja_ c.1.1.1 (A:) Triosepho 39.7 13 0.00084 16.1 3.1 28 107-134 173-200 (260)
18 d2btma_ c.1.1.1 (A:) Triosepho 35.9 15 0.00096 15.8 3.0 28 107-134 166-193 (251)
19 d1mg4a_ d.15.11.1 (A:) Doublec 32.4 17 0.0011 15.4 3.0 52 24-79 7-61 (101)
20 d1n55a_ c.1.1.1 (A:) Triosepho 31.4 18 0.0011 15.3 3.1 28 107-134 166-193 (249)
21 d1mo0a_ c.1.1.1 (A:) Triosepho 31.3 18 0.0011 15.3 3.0 27 107-133 172-198 (257)
22 d1kv5a_ c.1.1.1 (A:) Triosepho 30.5 18 0.0012 15.2 3.1 28 107-134 166-193 (249)
23 d1trea_ c.1.1.1 (A:) Triosepho 30.0 19 0.0012 15.1 3.1 28 107-134 167-194 (255)
24 d1n55a_ c.1.1.1 (A:) Triosepho 29.3 19 0.0012 15.1 3.1 28 107-134 166-193 (249)
25 d1ml4a1 c.78.1.1 (A:2-151) Asp 28.0 20 0.0013 14.9 4.8 35 41-75 3-37 (150)
26 d1o5xa_ c.1.1.1 (A:) Triosepho 26.8 21 0.0014 14.8 3.1 27 107-133 163-189 (246)
27 d2ff4a3 b.26.1.2 (A:284-382) P 24.5 18 0.0012 15.2 1.7 41 11-51 21-61 (99)
28 d1pn0a3 d.16.1.2 (A:241-341) P 23.0 16 0.001 15.5 1.2 69 13-81 12-87 (101)
29 d1mg4a_ d.15.11.1 (A:) Doublec 22.1 26 0.0017 14.2 3.0 28 24-51 7-34 (101)
30 d1we3a1 a.129.1.1 (A:3-138,A:4 22.0 26 0.0017 14.2 3.2 32 52-83 7-38 (255)
31 d2affa1 b.26.1.2 (A:3-100) Ant 21.2 27 0.0017 14.1 2.3 43 10-52 20-62 (98)
No 1
>d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]}
Probab=99.95 E-value=3.7e-29 Score=206.40 Aligned_cols=120 Identities=24% Similarity=0.435 Sum_probs=113.4
Q ss_pred EEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHE
Q ss_conf 76641561479851077887448873345623122089989999999999999999985244663022320114423113
Q T0522 15 IPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGALGNIVRQLHVH 94 (134)
Q Consensus 15 ~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~in~~~~g~~vpHlH~H 94 (134)
-+|.+.+.|.++|+.+|.+|||+||+||+|+++++||+++++.+++..++++++++++.++++++|+.++||+|||+|+|
T Consensus 15 ~ii~e~~~~~v~l~~~p~~pGh~Lvipk~H~~~l~dL~~~e~~~l~~~~~~~~~~l~~~~~~~~~n~~~~g~~v~HlH~H 94 (139)
T d2oika1 15 EILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDKINLASLGNMTPHVHWH 94 (139)
T ss_dssp EEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEECCSSSCSCEEE
T ss_pred EEEEECCCEEEEECCCCCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEE
T ss_conf 28997897999986799998689874100023064404889998887787786887754002556899756877768999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 2013368765786221588888889889999999999849
Q T0522 95 VIARREGDPNWPGPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 95 iIPR~~~D~~~p~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
|||||++|+.||+++|+.+.+..+++++.++++++||++|
T Consensus 95 viPR~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~lr~~L 134 (139)
T d2oika1 95 VIPRFKRDRHFPNSVWGETKRESLPQALDQGSTTALKKAI 134 (139)
T ss_dssp EEEECTTSSSTTSCTTSCCCSCCCCCCCCHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9505678878885530778786698789999999999999
No 2
>d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.3e-25 Score=183.58 Aligned_cols=132 Identities=20% Similarity=0.225 Sum_probs=116.8
Q ss_pred CCCCCHHHHHCCEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 76316366528876641561479851077887448873345623122089989999999999999999985244663022
Q T0522 3 TFTLDERLERDGIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIG 82 (134)
Q Consensus 3 ~~~l~~~l~~d~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~in~~ 82 (134)
+|+..+.+...+.+|.+.+.|.++++.+|..|||+||+||+|++++.||++++..+++.+++++++++++.++++++|+.
T Consensus 1 ~~~f~~~~i~p~~ii~e~e~~~afld~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~ 80 (146)
T d1fita_ 1 SFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFS 80 (146)
T ss_dssp CEEETTEEECGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 93123532582659998997999987777998379999522025877766899999999999999988862466258888
Q ss_pred -----HHCCHHHHHHHEEECCCCCCCCCCCCCCCCCCCC--------CCCHHHHHHHHHHHHHHC
Q ss_conf -----3201144231132013368765786221588888--------889889999999999849
Q T0522 83 -----ALGNIVRQLHVHVIARREGDPNWPGPVWGFGKAE--------PWPEEEHRTFAARIMENL 134 (134)
Q Consensus 83 -----~~g~~vpHlH~HiIPR~~~D~~~p~~v~~~~~~~--------~~~~~e~~~l~~~ir~~L 134 (134)
.+||+|+|+|+||||||+||..+...+|+...+. ....+|+.+.+++||+.+
T Consensus 81 ~~~g~~agq~v~HlH~HiiPR~~gD~~~~~~~~~~~~~~~~~~~~~~~r~~ee~~~~a~~lr~~~ 145 (146)
T d1fita_ 81 MQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKHDKEDFPASWRSEEEMAAEAAALRVYF 145 (146)
T ss_dssp ECCSGGGTCCSSSCCEEEEEECTTC--------------------CCCCCHHHHHHHHHHHHHTT
T ss_pred ECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 71665568997779999966867876666500355502044455222588999999999999851
No 3
>d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]} SCOP: d2fhia_ d3fita_ d1emsa1
Probab=99.92 E-value=3.7e-25 Score=180.62 Aligned_cols=120 Identities=21% Similarity=0.200 Sum_probs=109.0
Q ss_pred EEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH-----HCCHHH
Q ss_conf 766415614798510778874488733456231220899899999999999999999852446630223-----201144
Q T0522 15 IPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGA-----LGNIVR 89 (134)
Q Consensus 15 ~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~in~~~-----~g~~vp 89 (134)
.+|.+.+.|.++++.+|..|||+||+||+|+++++||+++++.+++..++++++++++.++++++|+.+ .||+||
T Consensus 13 ~ii~e~~~~~af~d~~P~~pgH~LViPK~h~~~l~dl~~~e~~~l~~~~~~v~~~l~~~~~~~g~n~~~~~g~~~Gq~v~ 92 (146)
T d1fita_ 13 VVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVK 92 (146)
T ss_dssp GEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGTCCSS
T ss_pred EEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
T ss_conf 27864783899853888885048984021213323467578889999999988888741387524798875711010047
Q ss_pred HHHHEEECCCCCCCCCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHC
Q ss_conf 23113201336876578622158888--------8889889999999999849
Q T0522 90 QLHVHVIARREGDPNWPGPVWGFGKA--------EPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 90 HlH~HiIPR~~~D~~~p~~v~~~~~~--------~~~~~~e~~~l~~~ir~~L 134 (134)
|+|+||||||+||..|++++|+.... ...+.+|+++.+++||+.+
T Consensus 93 H~HiHiIPr~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~~A~~lr~~~ 145 (146)
T d1fita_ 93 HVHVHVLPRKAGDFHRNDSIYEELQKHDKEDFPASWRSEEEMAAEAAALRVYF 145 (146)
T ss_dssp SCCEEEEEECTTC--------------------CCCCCHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 52178885237898887300003331132102246789889999999999863
No 4
>d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]}
Probab=99.91 E-value=1.5e-24 Score=176.74 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=107.7
Q ss_pred CCEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH-----HHCCH
Q ss_conf 8876641561479851077887448873345623122089989999999999999999985244663022-----32011
Q T0522 13 DGIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIG-----ALGNI 87 (134)
Q Consensus 13 d~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~in~~-----~~g~~ 87 (134)
.+.+|.|.+.+.++++.+|..|||+||+||+|++++.||+++++.+++..++++++++++.++++|+|+. ..||+
T Consensus 14 p~~~i~ede~~~af~d~~P~~~GH~LViPk~H~~~~~dL~~~~~~~l~~~~~~~~~~l~~~~~~~g~~i~~n~g~~agq~ 93 (139)
T d1y23a_ 14 PSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQS 93 (139)
T ss_dssp CCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCSEEEEEEEESGGGTCC
T ss_pred CCCEEEECCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEE
T ss_conf 75679877978998668889985799997213245211104788889999999888876401567748986777430574
Q ss_pred HHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 44231132013368765786221588888889889999999999849
Q T0522 88 VRQLHVHVIARREGDPNWPGPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 88 vpHlH~HiIPR~~~D~~~p~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
|||+|+||||||++|..| +..|. ..+...+++++++++++||++|
T Consensus 94 v~H~H~HviPR~~~~~~~-~~~~~-~~~~~~~~e~~~~~~~~i~~~L 138 (139)
T d1y23a_ 94 VFHYHMHIIPRYGKGDGF-GAVWK-THADDYKPEDLQNISSSIAKRL 138 (139)
T ss_dssp SSSCCEEEEEECSTTCSE-EEEEC-CCGGGSCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCCCCCC-CCCCC-CCCCCCCHHHHHHHHHHHHHHC
T ss_conf 478999997243289886-53566-6778789999999999999960
No 5
>d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.90 E-value=5.2e-24 Score=173.23 Aligned_cols=119 Identities=18% Similarity=0.129 Sum_probs=103.8
Q ss_pred EEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH-----HCCHHHH
Q ss_conf 66415614798510778874488733456231220899899999999999999999852446630223-----2011442
Q T0522 16 PIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGA-----LGNIVRQ 90 (134)
Q Consensus 16 ~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~in~~~-----~g~~vpH 90 (134)
++.+.+.|.++++.+|..|||+||+||+|+.+++||++++..+++.+++++++++++.++++++|+.+ +||+|+|
T Consensus 31 ii~ede~~~af~Di~P~~pgH~LVIPK~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~g~ni~~n~G~~aGq~V~H 110 (160)
T d1emsa1 31 IFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPH 110 (160)
T ss_dssp EEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCCSGGGTCCSSS
T ss_pred EEEECCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEE
T ss_conf 89967979999878999997489998603222455446789999988777655655403663478721567888807737
Q ss_pred HHHEEECCCCCCCCCCCC-----CCC-CCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 311320133687657862-----215-88888889889999999999849
Q T0522 91 LHVHVIARREGDPNWPGP-----VWG-FGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 91 lH~HiIPR~~~D~~~p~~-----v~~-~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
+|+||||||++|..++.. .|. .+.+.+.+.+|+.+.+++||+.|
T Consensus 111 lHiHIIPR~~~D~~~~~~~~~~~~~~~~~~~~~~s~eel~~eA~~lR~~l 160 (160)
T d1emsa1 111 VHIHILPRRAGDFGDNEIYQKLASHDKEPERKPRSNEQMAEEAVVYRNLM 160 (160)
T ss_dssp CCEEEEEECSSCC-------------------CCCHHHHHHHHHHHHTTC
T ss_pred EEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 89999777578765321444330034220027661999999999999529
No 6
>d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=8e-17 Score=126.95 Aligned_cols=92 Identities=17% Similarity=0.138 Sum_probs=82.8
Q ss_pred CCEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH-----HHCCH
Q ss_conf 8876641561479851077887448873345623122089989999999999999999985244663022-----32011
Q T0522 13 DGIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIG-----ALGNI 87 (134)
Q Consensus 13 d~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~in~~-----~~g~~ 87 (134)
.+.+|.|.+.+.++++.+|..|||+||+||+|++++.||++++...++.+.+.+.+++++...++++|+. .+||+
T Consensus 13 p~~ivyede~~~af~D~~P~~~gH~LViPk~H~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~n~g~~agq~ 92 (111)
T d1kpfa_ 13 PAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQS 92 (111)
T ss_dssp CCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSCGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEECCCHHHHTCC
T ss_pred CCCEEEECCCEEEEECCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
T ss_conf 76689968979998668998895389863100010334436799999999999999999847897779988578657743
Q ss_pred HHHHHHEEECCCCCCCCCC
Q ss_conf 4423113201336876578
Q T0522 88 VRQLHVHVIARREGDPNWP 106 (134)
Q Consensus 88 vpHlH~HiIPR~~~D~~~p 106 (134)
|+|+|+|||||.+ ..||
T Consensus 93 V~HlH~Hiip~~~--l~wp 109 (111)
T d1kpfa_ 93 VYHVHLHVLGGRQ--MHWP 109 (111)
T ss_dssp SSSCCEEEEESSC--CCSS
T ss_pred CCEEEEEEECCCC--CCCC
T ss_conf 4463899708986--8999
No 7
>d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]}
Probab=99.64 E-value=1.6e-16 Score=125.01 Aligned_cols=89 Identities=13% Similarity=0.047 Sum_probs=80.5
Q ss_pred CEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH-HCCCCCCH-----HHHCCH
Q ss_conf 876641561479851077887448873345623122089989999999999999999985-24466302-----232011
Q T0522 14 GIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKA-TGAEKINI-----GALGNI 87 (134)
Q Consensus 14 ~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~-~~~~~in~-----~~~g~~ 87 (134)
+.+|.|.+.+.++++.+|..|||+||+||+|+.++.||++++...++.+++.+.+++++. +.++++|+ ...||+
T Consensus 16 ~~ivyede~~~af~d~~P~~~gH~LViPk~H~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~agq~ 95 (113)
T d1xqua_ 16 STIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEKGYRLITNCGVAAGQT 95 (113)
T ss_dssp BCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTTCEEEECCCSTTTTCC
T ss_pred CCEEEECCCEEEEECCCCCCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
T ss_conf 55798689789987799999855998623111202220201589999999999988776066888549988375136665
Q ss_pred HHHHHHEEECCCCCC
Q ss_conf 442311320133687
Q T0522 88 VRQLHVHVIARREGD 102 (134)
Q Consensus 88 vpHlH~HiIPR~~~D 102 (134)
|+|+|+|||||++..
T Consensus 96 v~HlH~Hvip~~~~~ 110 (113)
T d1xqua_ 96 VFHLHYHLLGGVDMG 110 (113)
T ss_dssp SCSCCEEEEESSCCC
T ss_pred CCEEEEEEECCCCCC
T ss_conf 375089970760047
No 8
>d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.61 E-value=1.6e-15 Score=118.65 Aligned_cols=116 Identities=14% Similarity=0.076 Sum_probs=93.7
Q ss_pred HHCCEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH-------
Q ss_conf 5288766415614798510778874488733456231220899899999999999999999852446630223-------
Q T0522 11 ERDGIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGA------- 83 (134)
Q Consensus 11 ~~d~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~in~~~------- 83 (134)
.....+|.+.+.+.+++...+.+|||++|+||+|+.++.||++++..+++.+++++.+++++.++.+.+|+..
T Consensus 27 ~~~~riV~e~~~~~a~~p~~p~~p~h~lIiPk~h~~~~~~l~~~e~~~l~~~~~~v~~~l~~~~~~~~~n~~~~~~p~~~ 106 (156)
T d1z84a2 27 KSKHFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPYNYMIHTSPLKV 106 (156)
T ss_dssp HHHSEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEECCCTTC
T ss_pred CCCCEEEEECCCEEEEECCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCC
T ss_conf 28988999899899997368776767999866043533029999999999999999999998609976537662388887
Q ss_pred --HCCHHHHHHHEEECCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHH
Q ss_conf --2011442311320133687657862215888-888898899999999998
Q T0522 84 --LGNIVRQLHVHVIARREGDPNWPGPVWGFGK-AEPWPEEEHRTFAARIME 132 (134)
Q Consensus 84 --~g~~vpHlH~HiIPR~~~D~~~p~~v~~~~~-~~~~~~~e~~~l~~~ir~ 132 (134)
.++.++|+|+|++||.++.+ |.-||.+. -.+.++|+ .+++||+
T Consensus 107 ~~~~~~~~H~hi~~~Pr~~~~a---G~E~~tg~~~n~~~PE~---~A~~LR~ 152 (156)
T d1z84a2 107 TESQLPYTHWFLQIVPQLSGVG---GFEIGTGCYINPVFPED---VAKVMRE 152 (156)
T ss_dssp CGGGGGGCCCEEEEEECCCCCC---HHHHHHSCCEESSCHHH---HHHHHHH
T ss_pred CCCCCEEEEEEEEECCCCCCCC---CCEEECCCCCCCCCHHH---HHHHHHH
T ss_conf 6667606899999668777624---02134143607999999---9999874
No 9
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]}
Probab=99.58 E-value=6.3e-16 Score=121.18 Aligned_cols=120 Identities=14% Similarity=0.087 Sum_probs=91.5
Q ss_pred HHHCCEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHH-----
Q ss_conf 652887664156147985107788744887334562312208998999999999999999998524466-30223-----
Q T0522 10 LERDGIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEK-INIGA----- 83 (134)
Q Consensus 10 l~~d~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~-in~~~----- 83 (134)
++....+|.+.+.+.++++..|.+|||+||+||+|+.++.+|++++..+|+.+++++.+++++.+++++ +|+..
T Consensus 29 ~~~~~RiV~e~e~~~af~~~~p~~p~h~lIiPk~h~~~~~~l~~~e~~~L~~~~~~v~~~l~~~~~~~~~y~~~~~~~p~ 108 (171)
T d1guqa2 29 LADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPF 108 (171)
T ss_dssp HHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECCCS
T ss_pred CCCCCEEEEECCEEEEEECCCCCCCCEEEEECCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
T ss_conf 55787599989909999767889963589964531099345999999999999999999999860698433666300765
Q ss_pred --HCCHHHHHHHEEECCCCCCCCCCCCCC----CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf --201144231132013368765786221----5888888898899999999998
Q T0522 84 --LGNIVRQLHVHVIARREGDPNWPGPVW----GFGKAEPWPEEEHRTFAARIME 132 (134)
Q Consensus 84 --~g~~vpHlH~HiIPR~~~D~~~p~~v~----~~~~~~~~~~~e~~~l~~~ir~ 132 (134)
.++.++|+|+|++||+..+....+... +...-.+..+| +.+++||+
T Consensus 109 ~~~~~~~~H~Hihi~Pr~~r~~~~~~~~~g~E~~~~~~~~~~pE---~~A~~LR~ 160 (171)
T d1guqa2 109 NGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAE---QAAERLRA 160 (171)
T ss_dssp SSSCCTTCCCEEEEECCEEEETTEECCCCHHHHHTCCEESSCHH---HHHHHHHT
T ss_pred CCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHH---HHHHHHHH
T ss_conf 46778356899998467667788542206654522434789989---99999971
No 10
>d1vlra1 d.13.1.3 (A:146-337) mRNA decapping enzyme DcpS C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.75 E-value=3.5e-05 Score=52.03 Aligned_cols=69 Identities=16% Similarity=0.108 Sum_probs=53.8
Q ss_pred CCCCEEEEEECCCC-CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCC--CCCCHHH-HCCHHHHHHHEEECCC
Q ss_conf 78874488733456-23122089989999999999999999985244--6630223-2011442311320133
Q T0522 31 RRWPWLILVPQRAD-IKEVFELTPLDQAMLTFETNLVAAGLKKATGA--EKINIGA-LGNIVRQLHVHVIARR 99 (134)
Q Consensus 31 ~~~PG~~LV~pk~H-v~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~--~~in~~~-~g~~vpHlH~HiIPR~ 99 (134)
+.-.-|+|++|++| +.++.||+++...-+..+.....+++.+.++. +++.+.. .+.++.|+|+|+|..-
T Consensus 66 ~~~~lhlL~I~~r~~I~SlrDL~~ehlpLL~~m~~~~~~~i~~~~gi~~~~~Rig~H~~PSv~HLHlHvi~~~ 138 (192)
T d1vlra1 66 QLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLRVYLHYLPSYYHLHVHFTALG 138 (192)
T ss_dssp CSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEESSCSSSSCEEEEEETT
T ss_pred CCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCEEEEEEEEEECC
T ss_conf 5557699999766898984878886999999999999999999709973545999979998800378998516
No 11
>d2pofa1 d.13.1.4 (A:31-250) CDP-diacylglycerol pyrophosphatase CDH {Escherichia coli [TaxId: 562]}
Probab=93.40 E-value=0.032 Score=32.93 Aligned_cols=83 Identities=12% Similarity=0.094 Sum_probs=57.8
Q ss_pred HCCEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHH------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH--
Q ss_conf 288766415614798510778874488733456231220------899899999999999999999852446630223--
Q T0522 12 RDGIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFE------LTPLDQAMLTFETNLVAAGLKKATGAEKINIGA-- 83 (134)
Q Consensus 12 ~d~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~d------L~~ee~~~l~~~~~~v~~~l~~~~~~~~in~~~-- 83 (134)
..|..+..-+.+ |+| +|..-|-+-|++|...++.|.+ -++..+..=|..-..+++.+.+...-+.+..++
T Consensus 23 ~pC~~Vd~~~gy-vvl-KD~~G~~qyLliPt~rIsGIEsP~Ll~~~~pnyf~~AW~aR~~v~~~~g~~lpd~~lsLaINS 100 (220)
T d2pofa1 23 SPCAEVKPNAGY-VVL-KDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINS 100 (220)
T ss_dssp TTSSEEETTTTE-EEE-ECSSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBC
T ss_pred CCCEEEECCCCE-EEE-ECCCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEECC
T ss_conf 997067068997-999-479998227885155546753841327898618999998727888974898883014788537
Q ss_pred -HCCHHHHHHHEEE
Q ss_conf -2011442311320
Q T0522 84 -LGNIVRQLHVHVI 96 (134)
Q Consensus 84 -~g~~vpHlH~HiI 96 (134)
.|-+-.||||||=
T Consensus 101 ~~gRSQdQLHIHI~ 114 (220)
T d2pofa1 101 RTGRTQNHFHIHIS 114 (220)
T ss_dssp GGGCSCCSCCEEEE
T ss_pred CCCCCCCCEEEEHH
T ss_conf 77767241365653
No 12
>d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=85.45 E-value=0.69 Score=24.34 Aligned_cols=58 Identities=10% Similarity=0.237 Sum_probs=43.8
Q ss_pred EEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH--------HHHCCHHHHHHHEEEC
Q ss_conf 887334562312208998999999999999999998524466302--------2320114423113201
Q T0522 37 ILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINI--------GALGNIVRQLHVHVIA 97 (134)
Q Consensus 37 ~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~in~--------~~~g~~vpHlH~HiIP 97 (134)
++|...+|-..+.+|+.++...++.+.+.-.+.+.+ -+++++ ..+|-+.+|-|..|+.
T Consensus 104 VIi~sp~H~~~l~~~~~e~i~~v~~~~~~r~~~l~~---~~~i~yV~iF~N~G~~aGaSl~HPH~QI~a 169 (173)
T d1z84a1 104 VVIESPVHSIQLSDIDPVGIGDILIAYKKRINQIAQ---HDSINYIQVFKNQGASAGASMSHSHSQMMA 169 (173)
T ss_dssp EEECCSSSSCCGGGSCHHHHHHHHHHHHHHHHHHTT---CTTCCEEEEEEEESGGGTCCCSSCEEEEEE
T ss_pred EEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC---CCCCEEEEEEEECCCCCCCCCCCCCEEEEE
T ss_conf 688670104784129999999999999999999971---899619998714485576079887710466
No 13
>d1guqa1 d.13.1.2 (A:2-177) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]}
Probab=79.91 E-value=1.9 Score=21.44 Aligned_cols=61 Identities=16% Similarity=0.040 Sum_probs=43.9
Q ss_pred EEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC--CH-HHHCCHHHHHHHEEEC
Q ss_conf 8873345623122089989999999999999999985244663--02-2320114423113201
Q T0522 37 ILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKI--NI-GALGNIVRQLHVHVIA 97 (134)
Q Consensus 37 ~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~i--n~-~~~g~~vpHlH~HiIP 97 (134)
++|-..+|...+.+|+.++...++.+.+.-...+.+..+.--+ |. ..+|-+.+|-|..|+.
T Consensus 107 VIi~sp~H~~~l~~~~~~~i~~vl~a~~~R~~~l~~~i~yv~iFkN~G~~aGaSl~HPH~QI~a 170 (176)
T d1guqa1 107 VICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPGGQIWA 170 (176)
T ss_dssp EEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHCSEEEEEEEESGGGTCSCCSSEEEEEE
T ss_pred EEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEE
T ss_conf 8888814023943488999999999999999975679778997746685464788888710466
No 14
>d1r2ra_ c.1.1.1 (A:) Triosephosphate isomerase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=45.28 E-value=9.4 Score=17.03 Aligned_cols=28 Identities=18% Similarity=0.443 Sum_probs=24.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6221588888889889999999999849
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
.|+|..++....++++.+++...||..|
T Consensus 163 EPvWAIGTG~~a~~~~i~~~~~~Ir~~l 190 (246)
T d1r2ra_ 163 EPVWAIGTGKTATPQQAQEVHEKLRGWL 190 (246)
T ss_dssp CCGGGSSSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 7565326887766055666678877788
No 15
>d1b9ba_ c.1.1.1 (A:) Triosephosphate isomerase {Thermotoga maritima [TaxId: 2336]}
Probab=41.78 E-value=12 Score=16.47 Aligned_cols=28 Identities=25% Similarity=0.414 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6221588888889889999999999849
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
.|+|..++....++++.+++...||+.|
T Consensus 167 EPvWAIGtG~~a~~~~i~~~~~~Ir~~l 194 (252)
T d1b9ba_ 167 EPVWAIGTGRVATPQQAQEVHAFIRKLL 194 (252)
T ss_dssp CCGGGSSSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 5521356666778688888788889999
No 16
>d1neya_ c.1.1.1 (A:) Triosephosphate isomerase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.66 E-value=12 Score=16.37 Aligned_cols=28 Identities=29% Similarity=0.482 Sum_probs=24.3
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6221588888889889999999999849
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
.|+|..++....++++..++...||+.|
T Consensus 164 EPvWAIGtG~~a~~~~i~~~~~~Ir~~l 191 (247)
T d1neya_ 164 EPVWAIGTGLAATPEDAQDIHASIRKFL 191 (247)
T ss_dssp CCGGGTTTSCCCCHHHHHHHHHHHHHHH
T ss_pred CCHHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 6510146776667266654567888899
No 17
>d1m6ja_ c.1.1.1 (A:) Triosephosphate isomerase {Entamoeba histolytica [TaxId: 5759]}
Probab=39.66 E-value=13 Score=16.13 Aligned_cols=28 Identities=18% Similarity=0.423 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6221588888889889999999999849
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
.|+|..++....++++.+++...||+.|
T Consensus 173 EPvWAIGTG~~a~~~~i~~~~~~Ir~~l 200 (260)
T d1m6ja_ 173 EPVWAIGTGKTATPDQAQEVHQYIRKWM 200 (260)
T ss_dssp CCGGGSSSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 6331146886568177777778888898
No 18
>d2btma_ c.1.1.1 (A:) Triosephosphate isomerase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=35.91 E-value=15 Score=15.75 Aligned_cols=28 Identities=18% Similarity=0.498 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6221588888889889999999999849
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
.|+|..++....++++.+++.+.||+-|
T Consensus 166 EPvWAIGTG~~a~~~~i~e~~~~Ir~~l 193 (251)
T d2btma_ 166 EPIWAIGTGKSSTPEDANSVCGHIRSVV 193 (251)
T ss_dssp CCGGGTTTSCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 6301245566788266666689999999
No 19
>d1mg4a_ d.15.11.1 (A:) Doublecortin-like kinase Dclk {Human (Homo sapiens) [TaxId: 9606]} SCOP: d1uf0a_ d1mfwa_ d1mjda_
Probab=32.37 E-value=17 Score=15.39 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=30.9
Q ss_pred EEEEEECCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHH---HHHHHHHHHCCCCC
Q ss_conf 798510778874488733456231220899899999999999---99999985244663
Q T0522 24 QMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNL---VAAGLKKATGAEKI 79 (134)
Q Consensus 24 ~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~~ee~~~l~~~~~~---v~~~l~~~~~~~~i 79 (134)
.++-+-|+.+||..+++.++.+.+|..|=++ +.+.++. +..++++.|.++|.
T Consensus 7 ~v~rNGD~~~~g~~~~i~~r~~~sfd~lL~~----lT~~l~~~~~l~~~VRklyt~~G~ 61 (101)
T d1mg4a_ 7 RFYRNGDRYFKGIVYAISPDRFRSFEALLAD----LTRTLSDNVNLPQGVRTIYTIDGL 61 (101)
T ss_dssp EEEETTCSSCCCEEEEECTTTCSSHHHHHHH----HHHHHCCSSSSTTCCCEEEETTSS
T ss_pred EEEECCCCCCCCEEEEECCCCCCCHHHHHHH----HHHHHHCCCCCCCCCEEEEECCCC
T ss_conf 9973898799977888658765777889999----888740487888550087506888
No 20
>d1n55a_ c.1.1.1 (A:) Triosephosphate isomerase {Leishmania mexicana [TaxId: 5665]}
Probab=31.37 E-value=18 Score=15.28 Aligned_cols=28 Identities=18% Similarity=0.368 Sum_probs=24.1
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6221588888889889999999999849
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
.|+|..+.....++++..++...||..|
T Consensus 166 EPvWAIGtG~~a~~~~i~~~~~~Ir~~l 193 (249)
T d1n55a_ 166 EPVWAIGTGKVATPEQAQEVHLLLRKWV 193 (249)
T ss_dssp CCGGGSSSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 6532036786667588888899999999
No 21
>d1mo0a_ c.1.1.1 (A:) Triosephosphate isomerase {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=31.27 E-value=18 Score=15.27 Aligned_cols=27 Identities=22% Similarity=0.411 Sum_probs=23.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 622158888888988999999999984
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMEN 133 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~ 133 (134)
.|+|..+.....++++..++...||+.
T Consensus 172 EPvWAIGtG~~a~~~~i~e~~~~Ir~~ 198 (257)
T d1mo0a_ 172 EPVWAIGTGKTASGEQAQEVHEWIRAF 198 (257)
T ss_dssp CCGGGTTTSCCCCHHHHHHHHHHHHHH
T ss_pred CCHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 654213655445656665678889999
No 22
>d1kv5a_ c.1.1.1 (A:) Triosephosphate isomerase {Trypanosoma brucei [TaxId: 5691]}
Probab=30.46 E-value=18 Score=15.19 Aligned_cols=28 Identities=21% Similarity=0.366 Sum_probs=23.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6221588888889889999999999849
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
.|+|..++....++++..++...||..|
T Consensus 166 EPvWAIGtG~~a~~~~i~~~~~~Ir~~l 193 (249)
T d1kv5a_ 166 EPVWAIGTGKVATPQQAQEAHALISSWV 193 (249)
T ss_dssp CCGGGSSSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 7521136555555235555667777888
No 23
>d1trea_ c.1.1.1 (A:) Triosephosphate isomerase {Escherichia coli [TaxId: 562]}
Probab=29.98 E-value=19 Score=15.13 Aligned_cols=28 Identities=18% Similarity=0.458 Sum_probs=23.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6221588888889889999999999849
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
.|+|..++....++++..++.+.||+.|
T Consensus 167 EPvWAIGtG~~a~~~~~~~~~~~ir~~l 194 (255)
T d1trea_ 167 EPVWAIGTGKSATPAQAQAVHKFIRDHI 194 (255)
T ss_dssp CCGGGSSSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 5165315554667410245678888888
No 24
>d1n55a_ c.1.1.1 (A:) Triosephosphate isomerase {Leishmania mexicana [TaxId: 5665]} SCOP: d1qdsa_ d1amka_ d1tcdb_ d1tcda_ d1suxa_ d1tpfa_ d1tpfb_ d1tpea_ d1kv5a_ d1ttia_ d1tria_ d1ttja_ d1ml1a_ d1dkwa_ d1wyia1 d1r2ra_ d1r2rb_ d1sw3a_ d1tph1_ d8tima_ d1tpb1_ d1spqa_ d1spqb_ d1tpwa_ d1tpc1_ d1sw7a_ d1tpua_ d1tima_ d1sw0a_ d1su5a_ d1ssda_ d1tpva_ d7tima_ d1m6ja_ d3ypia_ d1neya_ d1mo0b_ d1mo0a_ d1o5xa_ d1vgaa_ d1tmha_ d1b9ba_ d1b9bb_ d2btma_ d1treb_ d1trea_ d1btma_ d1aw2a_ d1aw2b_
Probab=29.26 E-value=19 Score=15.06 Aligned_cols=28 Identities=18% Similarity=0.368 Sum_probs=24.1
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6221588888889889999999999849
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMENL 134 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~L 134 (134)
.|+|..++....++++.+++...||+.|
T Consensus 166 EPvWAIGtG~~as~~~i~~~~~~Ir~~l 193 (249)
T d1n55a_ 166 EPVWAIGTGKVATPEQAQEVHLLLRKWV 193 (249)
T ss_dssp CCGGGSSSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 1532368886544246677899999999
No 25
>d1ml4a1 c.78.1.1 (A:2-151) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=28.05 E-value=20 Score=14.92 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=29.3
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 34562312208998999999999999999998524
Q T0522 41 QRADIKEVFELTPLDQAMLTFETNLVAAGLKKATG 75 (134)
Q Consensus 41 pk~Hv~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~ 75 (134)
+.+|.-++.|+++++...++..+..+.+..++.-.
T Consensus 3 ~~kh~l~~~dls~~ei~~ll~~A~~lk~~~~~~~~ 37 (150)
T d1ml4a1 3 KGRDVISIRDFSKEDIETVLATAERLERELKEKGQ 37 (150)
T ss_dssp TTCCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 89497632108999999999999999875202566
No 26
>d1o5xa_ c.1.1.1 (A:) Triosephosphate isomerase {Plasmodium falciparum [TaxId: 5833]}
Probab=26.80 E-value=21 Score=14.78 Aligned_cols=27 Identities=19% Similarity=0.415 Sum_probs=23.4
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 622158888888988999999999984
Q T0522 107 GPVWGFGKAEPWPEEEHRTFAARIMEN 133 (134)
Q Consensus 107 ~~v~~~~~~~~~~~~e~~~l~~~ir~~ 133 (134)
.|+|..++....++++..++...||+.
T Consensus 163 EPvWAIGTG~~as~~~i~e~~~~Ir~~ 189 (246)
T d1o5xa_ 163 EPLWAIGTGKTATPEQAQLVHKEIRKI 189 (246)
T ss_dssp CCGGGSSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 650012589876640110014677778
No 27
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.51 E-value=18 Score=15.21 Aligned_cols=41 Identities=12% Similarity=0.041 Sum_probs=28.9
Q ss_pred HHCCEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHC
Q ss_conf 52887664156147985107788744887334562312208
Q T0522 11 ERDGIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFEL 51 (134)
Q Consensus 11 ~~d~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL 51 (134)
....+.||+.+.|.+.|.+..-.+-|+.+..+...-.+.|+
T Consensus 21 ~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~~~~i~Dl 61 (99)
T d2ff4a3 21 QAAATRIGRLHDNDIVLDSANVSRHHAVIVDTGTNYVINDL 61 (99)
T ss_dssp CSSEEEEESSTTSSEECCCTTSCTTCEEEEECSSCEEEEEC
T ss_pred CCCCEEEEECCCCCEEECCCCCCCEEEEEEEECCEEEEEEC
T ss_conf 99888981476899998896626036999975998999999
No 28
>d1pn0a3 d.16.1.2 (A:241-341) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}
Probab=23.03 E-value=16 Score=15.50 Aligned_cols=69 Identities=16% Similarity=0.129 Sum_probs=39.2
Q ss_pred CCEEEEECCEEEEEEEECCCCCEEEEEECCCCC--CCHHHCCHHHHHHHH-----HHHHHHHHHHHHHHCCCCCCH
Q ss_conf 887664156147985107788744887334562--312208998999999-----999999999998524466302
Q T0522 13 DGIPIGTLGLCQMRLMNDRRWPWLILVPQRADI--KEVFELTPLDQAMLT-----FETNLVAAGLKKATGAEKINI 81 (134)
Q Consensus 13 d~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv--~~l~dL~~ee~~~l~-----~~~~~v~~~l~~~~~~~~in~ 81 (134)
|+++....|..+..--..+.--|-+|++||++- .-+.+|+.+...+-- -....+.++.++.+.|=++.+
T Consensus 12 D~~~~TdFPDiR~~~~I~S~~~G~vl~IPRE~~l~R~Yv~l~~~~~~~~~~~~~~iT~e~i~~~a~~i~~Py~l~~ 87 (101)
T d1pn0a3 12 DAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYTFDV 87 (101)
T ss_dssp EEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSCCEE
T ss_pred EEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEC
T ss_conf 8678458999853789993798749999878992899998576545455654334899999999998618938624
No 29
>d1mg4a_ d.15.11.1 (A:) Doublecortin-like kinase Dclk {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.10 E-value=26 Score=14.21 Aligned_cols=28 Identities=11% Similarity=0.122 Sum_probs=21.8
Q ss_pred EEEEEECCCCCEEEEEECCCCCCCHHHC
Q ss_conf 7985107788744887334562312208
Q T0522 24 QMRLMNDRRWPWLILVPQRADIKEVFEL 51 (134)
Q Consensus 24 ~v~L~~~~~~PG~~LV~pk~Hv~~l~dL 51 (134)
.++-+=|+.+||..+++.++.+.++..|
T Consensus 7 ~~~rNGD~~~~g~~~~i~~r~~~s~d~l 34 (101)
T d1mg4a_ 7 RFYRNGDRYFKGIVYAISPDRFRSFEAL 34 (101)
T ss_dssp EEEETTCSSCCCEEEEECTTTCSSHHHH
T ss_pred EEEECCCCCCCCEEEEECCCCCCCHHHH
T ss_conf 9996999899989999895313899999
No 30
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]}
Probab=21.96 E-value=26 Score=14.19 Aligned_cols=32 Identities=22% Similarity=0.163 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 99899999999999999999852446630223
Q T0522 52 TPLDQAMLTFETNLVAAGLKKATGAEKINIGA 83 (134)
Q Consensus 52 ~~ee~~~l~~~~~~v~~~l~~~~~~~~in~~~ 83 (134)
.++++..+..-+..++.+++..+||.|-|+..
T Consensus 7 ~~~ar~~l~~gv~~la~av~~tlGP~G~~v~i 38 (255)
T d1we3a1 7 DEAARRALERGVNAVANAVKVTLGPRGRNVVL 38 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 79999999996999998886155878574999
No 31
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.24 E-value=27 Score=14.10 Aligned_cols=43 Identities=9% Similarity=-0.011 Sum_probs=31.0
Q ss_pred HHHCCEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCHHHCC
Q ss_conf 6528876641561479851077887448873345623122089
Q T0522 10 LERDGIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELT 52 (134)
Q Consensus 10 l~~d~~~i~~~~~~~v~L~~~~~~PG~~LV~pk~Hv~~l~dL~ 52 (134)
|.+..+.||+.+.|.+.|....-.+-|+.+.....--.+.|++
T Consensus 20 L~~~~~~IGr~~~~di~l~~~~is~~Ha~i~~~~~~~~i~d~~ 62 (98)
T d2affa1 20 LSLSTCLFGRGIECDIRIQLPVVSKQHCKIEIHEQEAILHNFS 62 (98)
T ss_dssp CCSSEEEEESSTTSSEEECCTTSCSSBEEEEECSSCEEEEECC
T ss_pred ECCCCEEEEECCCCCEEECCCCCCCEEEEEEEECCEEEEEECC
T ss_conf 7998889801878989958988271039999958989999899
Done!