Query T0524 NP_389718.1, Bacillus subtilis, 325 residues
Match_columns 325
No_of_seqs 129 out of 1996
Neff 9.4
Searched_HMMs 22458
Date Fri May 21 18:04:46 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/hhm/T0524.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/hhm/T0524.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k25_A SLR1438 protein; struct 100.0 0 0 331.0 30.4 279 7-322 6-288 (289)
2 3dcd_A Galactose mutarotase re 100.0 0 0 332.8 28.5 284 15-322 2-293 (307)
3 1nsx_A Galactose mutarotase; e 100.0 0 0 301.7 30.4 301 4-324 2-342 (347)
4 1lur_A Aldose 1-epimerase; vit 100.0 0 0 297.1 29.2 297 7-321 4-336 (339)
5 3imh_A Galactose-1-epimerase; 100.0 0 0 296.0 29.5 299 1-324 1-333 (338)
6 1yga_A Hypothetical 37.9 kDa p 100.0 0 0 296.6 27.7 301 12-321 9-341 (342)
7 1z45_A GAL10 bifunctional prot 100.0 0 0 286.2 32.9 296 11-320 371-698 (699)
8 1snz_A Aldose 1-epimerase; mut 100.0 0 0 284.9 31.5 291 13-320 21-341 (344)
9 2cir_A Hexose-6-phosphate muta 100.0 0 0 298.1 11.2 271 4-321 2-289 (297)
10 2hta_A Putative enzyme related 100.0 0 0 278.2 23.4 265 1-321 29-307 (309)
11 1jov_A HI1317; hypothetical pr 100.0 4E-43 0 260.8 25.1 250 1-319 9-269 (270)
12 3bs6_A Inner membrane protein 96.4 0.029 1.3E-06 29.4 14.7 131 14-174 4-137 (280)
13 1k1x_A 4-alpha-glucanotransfer 95.6 0.072 3.2E-06 27.2 11.1 45 4-48 389-433 (659)
14 3blc_A Inner membrane protein 95.4 0.085 3.8E-06 26.8 15.1 131 14-174 35-168 (330)
15 4ubp_B Protein (urease (chain 86.6 1.1 4.8E-05 20.6 5.4 32 148-181 18-49 (126)
16 1e9y_A Urease alpha subunit; h 81.5 1.4 6.2E-05 19.9 4.0 32 148-181 117-148 (238)
17 1ejx_B Urease beta subunit; al 79.1 2.2 9.7E-05 18.8 5.3 32 148-181 12-43 (101)
18 1yew_A Particulate methane mon 59.6 6.1 0.00027 16.3 5.2 15 305-319 321-335 (382)
19 1v7w_A Chitobiose phosphorylas 52.8 7.9 0.00035 15.7 4.6 35 143-177 118-152 (807)
20 3isy_A Bsupi, intracellular pr 47.2 9.8 0.00043 15.1 5.7 33 142-174 6-38 (120)
21 3mi6_A Alpha-galactosidase; NE 42.6 12 0.00051 14.7 14.8 63 117-188 128-192 (745)
22 3chx_A PMOB; membrane protein, 40.7 12 0.00055 14.6 3.2 15 305-319 326-340 (392)
23 1so9_A Cytochrome C oxidase as 32.1 6.9 0.00031 16.0 -0.1 37 137-174 43-82 (164)
24 2g8g_A Capsid; adeno-associate 30.7 18 0.00081 13.6 1.9 17 26-42 112-128 (524)
25 1s58_A B19 parvovirus capsid; 21.2 21 0.00094 13.2 0.7 16 26-41 140-155 (554)
No 1
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=0 Score=330.98 Aligned_cols=279 Identities=20% Similarity=0.351 Sum_probs=219.4
Q ss_pred EEECCCEEEEEEECC--CEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCC-CCEECCCEEEEC
Q ss_conf 865198159999879--73999992138499999989997439966899588638873245000665-404219879879
Q T0524 7 KITYLGTPAIKAGNE--HLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGTFSFR 83 (325)
Q Consensus 7 ~~~~~G~~~i~L~n~--~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~-~~Ri~~g~f~~~ 83 (325)
++.=+++- +.|+|+ .++++|+|++||.|+||+.+ ++|+||.++...+...++.++|+|+||| +|||++|.|.++
T Consensus 6 ~~~~~~~t-~~l~~~~~~~~v~v~P~~Ga~i~s~~~~--g~e~L~~~~~~~~~~~~~~~gG~p~lfP~~gRi~~g~~~~~ 82 (289)
T 3k25_A 6 FTPDRPLT-YHLEDDQSLARLSLVPGRGGLVTEWTVQ--GQPILYFDRERFQDPSLSVRGGIPILFPICGNLPQDQFNHA 82 (289)
T ss_dssp EECCBCCE-EEEEETTTTEEEEEEGGGTSEEEEEEET--TEECBCBCTTGGGSTTSCCCBSBCEEBSCSSCCGGGEEEET
T ss_pred ECCCCCEE-EEEECCCCCEEEEECCCCCCEEEEEEEC--CEEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEC
T ss_conf 16999889-9999289828999872379899999989--99998559378626777537888188878480589948489
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEE
Q ss_conf 97999446898665556876566216999821367824999999845788500469844999999997589089999998
Q T0524 84 GRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKHATVM 163 (325)
Q Consensus 84 G~~~~l~~~~~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i~~~v~ 163 (325)
|+.|+++ +||++|+.+|+++..+..... .+.+.+.+++++..+|||+|+++++|+|.+++|+++++++
T Consensus 83 g~~~~l~---------~HG~~~~~~w~~~~~~~~~~~---~~~~~l~~~~~~~~~~P~~~~~~~~y~L~~~~L~~~~~v~ 150 (289)
T 3k25_A 83 GKSYRLK---------QHGFARDLPWEVIGQQTQDNA---RLDLRLSHNDATLEAFPFAFELVFSYQLQGHSLRIEQRIA 150 (289)
T ss_dssp TEEEECC---------TTBSGGGSCCEEEEEECSSSE---EEEEEEECCHHHHTTSCSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CEEEECC---------CCCCCCCCCCEEEEEECCCCC---EEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEE
T ss_conf 9796257---------785515775167786317882---6899996472300249985699999999277269999998
Q ss_pred ECCCCEEEEEHHHCCEEEECCC-CEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 4778615531001453650799-719998477078876765788741357873434466105733246047882478887
Q T0524 164 NKGKEAFPWGIGYHTTFIFPAE-SSLFSLTADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQKRGG 242 (325)
Q Consensus 164 N~g~~~~p~~~~~H~yf~~~~~-~~~l~~~~~~~~~~d~~~~pt~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 242 (325)
|.|+++|||++|+||||++++. ..++.+++... ++.... .... +.....+....+|+.+... .
T Consensus 151 N~~~~~~p~~~g~HpyF~~~~~~~~~~~~~~~~~--~~~~~~---~~~~------~~~~~~~~~~~~d~~~~~~-----~ 214 (289)
T 3k25_A 151 NLGDQRMPFSLGFHPYFFCREKLGITLAIPANDY--LDQKTG---DCHG------YDGQLNLTSPELDLAFTQI-----S 214 (289)
T ss_dssp ECSSSCEEECCEECCEEECSCCTTCEEECSCSEE--EETTTC---CEEE------CCSCCCTTSSEEEEEECCC-----S
T ss_pred CCCCCCEEEEEEECCEECCCCCEEEEEEECCCCE--ECCCCC---CCCC------CCCCEECCCCCCCEEEEEC-----C
T ss_conf 2799777999782754725873048997457520--224558---7435------5774010565441034306-----8
Q ss_pred CCEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEE
Q ss_conf 62799996899759999985997759996488678839993254788878888777636758978997699999999986
Q T0524 243 ENQAVIYHQHAHISIIYKADEQFKHWVVYNADGKQGYLCPEPYTWVTNAVNLDLPSSLTGLQVLEPGEETTAKSSITIEL 322 (325)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~vciEP~t~~~da~n~~~~~~~~g~~~L~PGe~~~~~~~i~ie~ 322 (325)
.....+.++..+.++.+..++.++++++|++++ ++||||||||++|||+|. +.++++|+|||+++++++|+|.-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vwtp~~-~~~vciEP~t~~~da~n~-----~~~l~~L~PGe~~~~~~~~~v~~ 288 (289)
T 3k25_A 215 QPRAHFIDPDRNLKIEVSFSELYQTLVLWTVAG-KDYLCLEPWSGPRNALNS-----GEQLAWVEPYSSRSAWVNFQVST 288 (289)
T ss_dssp SSEEEEEETTTTEEEEEEECTTCCEEEEEEESS-SCEEEEEEESSCTTHHHH-----CTTCEEECTTEEEEEEEEEEEEC
T ss_pred CCCEEEEECCCCCEEEEEECCCCCEEEEECCCC-CCEEEEECCCCCCCCCCC-----CCCCEEECCCCEEEEEEEEEEEE
T ss_conf 982278816898189999889998799927899-989999374889985548-----99988989999199999999997
No 2
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=0 Score=332.81 Aligned_cols=284 Identities=19% Similarity=0.318 Sum_probs=218.7
Q ss_pred EEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCC-CCEECCCEEEECCEEEEECCCC
Q ss_conf 999987973999992138499999989997439966899588638873245000665-4042198798799799944689
Q T0524 15 AIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGTFSFRGRTYHFDINE 93 (325)
Q Consensus 15 ~i~L~n~~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~-~~Ri~~g~f~~~G~~~~l~~~~ 93 (325)
.++|+|+.++++|+ .+||+|+||+++..++++||+++...+ .+|.|+||| +|||++|.|.++|+.|+++
T Consensus 2 ~~tleN~~l~v~v~-~~Ga~l~s~~~~~~~~e~L~~~~~~~~------~~~~p~l~P~~gRi~~g~~~~~g~~~~l~--- 71 (307)
T 3dcd_A 2 DYTIENNMIKVVIS-DHGAEIQSVKSAHTDEEFMWQANPEIW------GRHAPVLFPIVGRLKNDEYTYKGKTYHLG--- 71 (307)
T ss_dssp EEEEECSSEEEEEE-TBTTEEEEEEETTTCCBCBCCCCTTTC------CCSSCEEBSCSSCCGGGEEEETTEEEECC---
T ss_pred EEEEECCCEEEEEE-CCCCEEEEEEECCCCEEEEECCCHHHH------CCCCCEEEEECCCCCCCEEEECCCEEEEC---
T ss_conf 89999699999997-569799999979999688973886883------78996899882641899076779798566---
Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCEEEEE
Q ss_conf 86655568765662169998213678249999998457885004698449999999975890899999984778615531
Q T0524 94 KDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKHATVMNKGKEAFPWG 173 (325)
Q Consensus 94 ~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i~~~v~N~g~~~~p~~ 173 (325)
+||++|+++|++...+++ .+++.+..+.++.++|||+|+++++|+|++++|+++++++|.|++++||+
T Consensus 72 ------~HG~~~~~~w~v~~~~~~------~~~l~l~~~~~~~~~~P~~~~l~~~~~L~~~~L~i~~~v~N~~~~~~p~~ 139 (307)
T 3dcd_A 72 ------QHGFARNADFEVENHTKE------SITFLLKDNEETRKVYPFKFEFRVNYNLMNNLLEENFSVVNKSDETMIFG 139 (307)
T ss_dssp ------TTBSGGGSBCEEEEEETT------EEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSSCEEEC
T ss_pred ------CCCCCCCCCEEEEECCCC------EEEEEECCCHHHHCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCEEEE
T ss_conf ------679957852699982798------17999704824620599876999999962564899999993888637884
Q ss_pred HHHCCEEEECCCCE----EEEECCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEE
Q ss_conf 00145365079971----99984770788767657887413578-73434466105733246047882478887627999
Q T0524 174 IGYHTTFIFPAESS----LFSLTADQQWELDERLLPTGKLMDVP-YKEALHEGMDLRHKQLDDVFLSSYQKRGGENQAVI 248 (325)
Q Consensus 174 ~~~H~yf~~~~~~~----~l~~~~~~~~~~d~~~~pt~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 248 (325)
+|+||||++++... .+.+........+...++++...... ...+......+....+++...... ..+....+.+
T Consensus 140 ~g~HpYF~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~l 218 (307)
T 3dcd_A 140 VGGHPGFNLPTDHGENKEDFYFDMHPSVTRVRIPLKDASLDWNNRSLAPTDSLIALSDDLFKDDALIYE-LRGNDNKVSL 218 (307)
T ss_dssp EEECCEEECCCTTSCCGGGEEEEEESCCCEEECCEETTEECGGGCEEECTTSCEECCSGGGTTSCEEEE-CCSSCEEEEE
T ss_pred EECCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEE-CCCCCCEEEE
T ss_conf 052405855865572000389981456521211368773035667305667604414543256549994-4898618999
Q ss_pred EECCCCEEEEEEECCCCCEEEEECCC-CCCCEEEEECCCCCCCCCCCCCC-CCCCCCEEECCCCEEEEEEEEEEEE
Q ss_conf 96899759999985997759996488-67883999325478887888877-7636758978997699999999986
Q T0524 249 YHQHAHISIIYKADEQFKHWVVYNAD-GKQGYLCPEPYTWVTNAVNLDLP-SSLTGLQVLEPGEETTAKSSITIEL 322 (325)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~v~~~~-~~~~~vciEP~t~~~da~n~~~~-~~~~g~~~L~PGe~~~~~~~i~ie~ 322 (325)
.++..+.++.+..+ .++++++|++. +.++||||||||++|||+|.+.. ..+.|++.|+|||+++++++|++..
T Consensus 219 ~~~~~~~~l~~~~~-~~p~~~vwt~~~~~~~~vcvEP~t~~~da~n~~~~~~~~~g~~~L~pge~~~~~~~it~~~ 293 (307)
T 3dcd_A 219 RTDKNKFHVNVWTR-DAPFVGIWSQYPKTDNYVCIEPWWGIADRDDADGDLEHKYGMNHLKPGKEFQAGFSMTYHS 293 (307)
T ss_dssp EETTSSCEEEEEEE-TCSEEEEECCSSSCCSEEEEEEEESCCCBTTCCSBGGGCTTCEEECTTCEEEEEEEEEEEC
T ss_pred EECCCCCEEEEEEC-CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEC
T ss_conf 96899829999848-9997999899999998999914478998567732001277988989999999999999986
No 3
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=100.00 E-value=0 Score=301.68 Aligned_cols=301 Identities=18% Similarity=0.222 Sum_probs=233.2
Q ss_pred CEEEEEC-CCEEEEEEECCC-EEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEECCCEEE
Q ss_conf 0578651-981599998797-39999921384999999899974399668995886388732450006654042198798
Q T0524 4 FIEKITY-LGTPAIKAGNEH-LEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFS 81 (325)
Q Consensus 4 ~~~~~~~-~G~~~i~L~n~~-l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~~~Ri~~g~f~ 81 (325)
.|+...| +|.+.|+|+|+. +++.|++ +||.|.+|+.++ .+++..++..+.+..++.+.|+.++|++|||++|.|.
T Consensus 2 ~i~~~~~g~~~~~~tL~N~~g~~v~i~~-~GA~i~~~~~~~--~~vvlg~~~~~~y~~~~~~~Ga~iGr~anRI~~g~f~ 78 (347)
T 1nsx_A 2 SIKIRDFGLGSDLISLTNKAGVTISFTN-LGARIVDWQKDG--KHLILGFDSAKEYLEKDAYPGATVGPTAGRIKDGLVK 78 (347)
T ss_dssp CEEEEEEETTEEEEEEECTTSCEEEEET-BTTEEEEEEETT--EESBCCCSSHHHHHHTCSCTTCEECSBCSEEGGGEEE
T ss_pred CEEEECCCCCCEEEEEECCCCCEEEEEC-CCEEEEEECCCC--CEEEECCCCHHHHHHCCCCCCCEECCCCCCCCCCEEE
T ss_conf 4377017984269999959983999979-886999703699--7589669998998317885275714516711388040
Q ss_pred ECCEEEEECCCCCCCCCCCCCCC---CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEE
Q ss_conf 79979994468986655568765---662169998213678249999998457885004698449999999975890899
Q T0524 82 FRGRTYHFDINEKDKHNHLHGFL---YHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFK 158 (325)
Q Consensus 82 ~~G~~~~l~~~~~~~~~~~HG~~---~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i 158 (325)
++|+.|+|+.|++ ++++||.. ..+.|++...+. .....+++++... +...+||+++.++++|+|+++. ++
T Consensus 79 ~~G~~y~L~~Ne~--~~~lHGG~~g~~~~~w~~~~~~~-~~~~~v~~~~~~~---dg~~GyPg~~~~~vtY~L~~~~-~l 151 (347)
T 1nsx_A 79 ISGKDYILNQNEG--PQTLHGGEESIHTKLWTYEVTDL-GAEVQVKFSLVSN---DGTNGYPGKIEMSVTHSFDDDN-KW 151 (347)
T ss_dssp ETTEEEECCCCBT--TBEETTSTTCGGGSBCEEEEEEC-SSEEEEEEEEEEC---TTGGGCCSCEEEEEEEEEETTS-EE
T ss_pred ECCEEEEECCCCC--CCCCCCCCCCCCCCCEEEEEECC-CCCEEEEEEEEEC---CCCCCCCEEEEEEEEEEECCCC-EE
T ss_conf 8998999147889--87557886555760024676527-8843899999968---9878875789999999964598-48
Q ss_pred EEEEEECCCCEEEEEHHHCCEEEECC------CCEEEEECCCCEEEE-CCCCCCCCCCCCC-CCCCCCCCCCCCCC----
Q ss_conf 99998477861553100145365079------971999847707887-6765788741357-87343446610573----
Q T0524 159 HATVMNKGKEAFPWGIGYHTTFIFPA------ESSLFSLTADQQWEL-DERLLPTGKLMDV-PYKEALHEGMDLRH---- 226 (325)
Q Consensus 159 ~~~v~N~g~~~~p~~~~~H~yf~~~~------~~~~l~~~~~~~~~~-d~~~~pt~~~~~~-~~~~~~~~~~~~~~---- 226 (325)
.++++|.+++++|+++++||||++++ .+++|.++++.++++ |+..+|||++.++ ...+||+....+..
T Consensus 152 ~i~~~a~s~~~tp~nlt~H~YFnL~g~~~~~i~~h~L~i~a~~~l~~~D~~~iPtG~~~~v~~t~~Dfr~~~~i~~~~~~ 231 (347)
T 1nsx_A 152 KIHYEAISDKDTVFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNS 231 (347)
T ss_dssp EEEEEEEESSCEECBCEECCEECTTSSTTSCGGGSEEEECEEEECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHHC
T ss_pred EEEEEEECCCCEEEECCCCCCEECCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHC
T ss_conf 99999743775476406525064477556752007999803758996278877678255477998656677284542412
Q ss_pred --------CCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC-------------CCCEEEEECC
Q ss_conf --------3246047882478887627999968997599999859977599964886-------------7883999325
Q T0524 227 --------KQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-------------KQGYLCPEPY 285 (325)
Q Consensus 227 --------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~-------------~~~~vciEP~ 285 (325)
..+|++|....... ....+.+.. ++++|++++++ +.+++||... ....||||||
T Consensus 232 ~~~~~~~~~G~D~~f~l~~~~~-~~~~~~l~~--~~~~l~v~T~~--p~~qvYT~n~l~~~~~~~~~~~~~~~giclEpq 306 (347)
T 1nsx_A 232 NMEQVQLVKGIDHPFLLDQLGL-DKEQARLTL--DDTSISVFTDQ--PSIVIFTANFGDLGTLYHEKKQVHHGGITFECQ 306 (347)
T ss_dssp CCHHHHHHTSCEEEEEESSCBT-TSCCEEEEE--TTEEEEEEESS--SEEEEECCCCTTCCCEETTEECCTTCCEECEEE
T ss_pred CHHHHCCCCCCCCCEEECCCCC-CCCEEEEEE--CCCEEEEEECC--CEEEEEECCCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf 0244113578886347456778-730389974--89608999389--979999077677655678876787789999557
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCEEE--EEEEEEEEECC
Q ss_conf 4788878888777636758978997699--99999998617
Q T0524 286 TWVTNAVNLDLPSSLTGLQVLEPGEETT--AKSSITIELNH 324 (325)
Q Consensus 286 t~~~da~n~~~~~~~~g~~~L~PGe~~~--~~~~i~ie~~~ 324 (325)
.+|||+|++.+.+ ++|+|||+++ ..++|+++++|
T Consensus 307 -~~Pda~N~~~f~~----i~L~pge~y~~~t~Y~f~~~~~~ 342 (347)
T 1nsx_A 307 -VSPGSEQIPELGD----ISLKAGEKYQATTIYSLHTKLEH 342 (347)
T ss_dssp -SCTTTTTCGGGCC----CEECTTCEEEEEEEEEEEECC--
T ss_pred -CCCCCCCCCCCCC----EEECCCCEEEEEEEEEEEEEEEC
T ss_conf -8998657778998----08999999988999999998752
No 4
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=100.00 E-value=0 Score=297.14 Aligned_cols=297 Identities=19% Similarity=0.259 Sum_probs=232.5
Q ss_pred EEECCCEE--EEEEECCC-EEEEEECCCCCEEEEEEEC---CCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEECCCEE
Q ss_conf 86519815--99998797-3999992138499999989---997439966899588638873245000665404219879
Q T0524 7 KITYLGTP--AIKAGNEH-LEMIVVPEWGSNVISLVDK---TTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTF 80 (325)
Q Consensus 7 ~~~~~G~~--~i~L~n~~-l~~~i~p~~Ga~i~s~~~~---~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~~~Ri~~g~f 80 (325)
+.-+.|+. .|+|+|+. +++.|++ +||.|.||+.. |...+++..++..+.+..++.+.|+.++|++|||++|.|
T Consensus 4 ~~~~~~~~~~~i~l~N~~g~~v~i~~-~GA~i~~~~vpd~~G~~~~vvlg~~~~~~y~~~~~~~Ga~iGr~anRI~~g~f 82 (339)
T 1lur_A 4 HHHHHSMASGFIEIANKQGLTATLLP-FGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTL 82 (339)
T ss_dssp -------CCCCEEEECSSSCEEEEET-BTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCTTCEECSBCSEEGGGEE
T ss_pred CCCCCCCCCCEEEEECCCCCEEEEEC-CCCEEEEEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCEECCCCCEEECCEE
T ss_conf 43456555756999969995999989-69299999988888988142888999899953888606588773685789889
Q ss_pred EECCEEEEECCCCCCCCCCCCCCC---CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEE
Q ss_conf 879979994468986655568765---66216999821367824999999845788500469844999999997589089
Q T0524 81 SFRGRTYHFDINEKDKHNHLHGFL---YHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLF 157 (325)
Q Consensus 81 ~~~G~~~~l~~~~~~~~~~~HG~~---~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~ 157 (325)
.++|+.|+|++|++ ++.+||.. +.+.|+++..+.+ .. .+.+. +++...+||+++.++++|+|+++. .
T Consensus 83 ~~~G~~y~L~~Ne~--~n~lHGg~~g~~~~~W~v~~~~~~--~v--~l~~~---~~~g~~GyPg~l~~~vtY~L~~~~-~ 152 (339)
T 1lur_A 83 HFDGKQYTMTPNNG--PHYLHGGPNGLGYRKWEVVRHAPE--SV--SFSVR---ANEQDDGLPGDAKIDVTYTVNDRN-Q 152 (339)
T ss_dssp EETTEEEECCCSBT--TBEETTCTTSGGGSBCEEEEEETT--EE--EEEEE---EEHHHHSSSSEEEEEEEEEECTTS-E
T ss_pred EECCEEEEECCCCC--CCCCCCCCCCCCEECCEEEEECCC--CE--EEEEE---CCCCCCCCCCEEEEEEEEEECCCC-E
T ss_conf 89999999148999--855588877631352114770587--22--99998---178767877448999999965698-6
Q ss_pred EEEEEEECCCCEEEEEHHHCCEEEECC----CCEEEEECCCCEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCC----
Q ss_conf 999998477861553100145365079----9719998477078876765788741357-8734344661057332----
Q T0524 158 KHATVMNKGKEAFPWGIGYHTTFIFPA----ESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLRHKQ---- 228 (325)
Q Consensus 158 i~~~v~N~g~~~~p~~~~~H~yf~~~~----~~~~l~~~~~~~~~~d~~~~pt~~~~~~-~~~~~~~~~~~~~~~~---- 228 (325)
+.+++++.+++++|+++++|+||++.+ .+++|+++++.++++|+..+|||.+.+. ...+||+.+..+....
T Consensus 153 l~i~~~a~~d~~tp~nlt~H~YFNL~g~~~i~~h~L~i~a~~~l~~D~~~iPtG~~~~v~~t~~Dfr~~~~l~~~~~d~~ 232 (339)
T 1lur_A 153 LIIEHHATCDTPGLLALTNHAYWNLDGSDTVAEHFLEMEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAE 232 (339)
T ss_dssp EEEEEEEECSSCEECBCEECCEECSSCCSCSTTCEEEECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSS
T ss_pred EEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999975598705785154413257887767739998668588758555206754634688765558630575322434
Q ss_pred ----CCEEEEECCCCC--CCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC------------CCCEEEEECCCCCCC
Q ss_conf ----460478824788--87627999968997599999859977599964886------------788399932547888
Q T0524 229 ----LDDVFLSSYQKR--GGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG------------KQGYLCPEPYTWVTN 290 (325)
Q Consensus 229 ----~d~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~------------~~~~vciEP~t~~~d 290 (325)
.|+++....... .....+.+.++.+|++|++..+. +.+++|++.. .+..||||||+ +||
T Consensus 233 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~sg~~l~v~t~~--p~~qvYT~n~l~~~~~~g~~~~~~~gi~lEpq~-~Pd 309 (339)
T 1lur_A 233 ELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTSY--PVIHLYASKFLDCKGKKGEHYKANKALAIEPQF-HSA 309 (339)
T ss_dssp CCCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEESS--SEEEEECCTTCCEECGGGCEECTTCCEEEEEES-CTT
T ss_pred EEEECCCCEEEECCCCCCCCCEEEEEECCCCCEEEEEECCC--CEEEEECCCCCCCCCCCCCCCCCCCEEEEECCC-CCC
T ss_conf 03602786798437898775169999639988599996799--889996898777778788796888889995469-998
Q ss_pred CCCCCCCCCCCCCEEECCCCEEEEEEEEEEE
Q ss_conf 7888877763675897899769999999998
Q T0524 291 AVNLDLPSSLTGLQVLEPGEETTAKSSITIE 321 (325)
Q Consensus 291 a~n~~~~~~~~g~~~L~PGe~~~~~~~i~ie 321 (325)
|+|++.+.+ ++|+|||.++.++.+++.
T Consensus 310 A~N~~~f~~----~iL~pge~y~~~t~Y~Fs 336 (339)
T 1lur_A 310 APNFDHFPD----VSLRPGDHYCQEIVYTFS 336 (339)
T ss_dssp GGGCTTSCC----CEECTTCCEEEEEEEEEE
T ss_pred CCCCCCCCC----EEECCCCEEEEEEEEEEE
T ss_conf 556778998----089999999889999987
No 5
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein structure initiative; 1.76A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=0 Score=296.02 Aligned_cols=299 Identities=16% Similarity=0.218 Sum_probs=230.5
Q ss_pred CCCCEEEEEC---CCEE--EEEEECCC-EEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCE
Q ss_conf 9730578651---9815--99998797-3999992138499999989997439966899588638873245000665404
Q T0524 1 MANFIEKITY---LGTP--AIKAGNEH-LEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFPPNR 74 (325)
Q Consensus 1 ~~~~~~~~~~---~G~~--~i~L~n~~-l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~~~R 74 (325)
|.|-++...| +|.+ .|+|+|+. +++.|++ +||.|.+|+.++ .+++..++..+.+..++.+.|+.++|++||
T Consensus 1 ~~m~~~~~~~~~~~g~~v~~itl~N~~g~~v~i~~-~GA~i~~~~~~~--~~vvlg~d~~~~y~~~~~~~Ga~~Gp~anR 77 (338)
T 3imh_A 1 MSLKTNFVKYERKDNKDLCEITLENDAGMAVKVLN-YGATLEKVLLDG--ENMILSLNSPEDYSKERNFLGGTVGRIAGR 77 (338)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEEECSSSEEEEEET-BTTEEEEEEETT--EECBCCCSSGGGGGTSCCCTTCEECSBCSE
T ss_pred CCEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEC-CCCEEEEEEECC--EEEEECCCCHHHHHHCCCCCCCCCCCCCCE
T ss_conf 94067520530289989999999969983999987-591999999899--128852899899842888468680675884
Q ss_pred ECCCEEEECCEEEEECCCCCCCCCCCCCCC-CC-CCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 219879879979994468986655568765-66-2169998213678249999998457885004698449999999975
Q T0524 75 ISDGTFSFRGRTYHFDINEKDKHNHLHGFL-YH-EKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIK 152 (325)
Q Consensus 75 i~~g~f~~~G~~~~l~~~~~~~~~~~HG~~-~~-~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~ 152 (325)
|++|.|.++|+.|+|++|++.. ++||.. .. ..|+.... .+.....+++++.. ++...+||++++++++|+|+
T Consensus 78 I~~g~f~~~G~~y~L~~Ne~~~--~~HGg~g~~~~~~~~~~~-~~~~~~~v~l~~~~---~~g~~GyPg~~~~~vtY~L~ 151 (338)
T 3imh_A 78 VRAGQWKHGNEIHQLPLNDGDN--HIHGGIGTDMHVWDFRPS-CDSEHARVDLTLFD---PDGNNDYPGNLKLHARYELD 151 (338)
T ss_dssp EGGGEEEETTEEEECCCCBTTB--EETTSSCGGGSBCEEEEE-ECSSEEEEEEEEEE---CTTGGGCCSCEEEEEEEEEE
T ss_pred EECCEEEECCEEEECCCCCCCC--CCCCCCCCCCCCEEEEEE-ECCCCCEEEEEEEC---CCCCCCCCEEEEEEEEEEEE
T ss_conf 5588998899999666889976--658985568750578887-14776489999974---88678998789999999991
Q ss_pred CCEEEEEEEEEECCCCEEEEEHHHCCEEEECC--CCEEEEECCCCEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCC---
Q ss_conf 89089999998477861553100145365079--9719998477078876765788741357-87343446610573---
Q T0524 153 ENTLFKHATVMNKGKEAFPWGIGYHTTFIFPA--ESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLRH--- 226 (325)
Q Consensus 153 ~~~L~i~~~v~N~g~~~~p~~~~~H~yf~~~~--~~~~l~~~~~~~~~~d~~~~pt~~~~~~-~~~~~~~~~~~~~~--- 226 (325)
++. ++.++++|.+++++|+++++||||++.+ ++++|+++++.++++|+..+|||.+.+. ...+||+....+..
T Consensus 152 ~~~-~l~i~~~~~~~~~tp~~l~~HpYFnL~~~~~d~~L~i~a~~~l~~D~~~iPtG~~~~~~~t~~DFr~~~~i~~~~~ 230 (338)
T 3imh_A 152 NEN-NLHYLLEAVSDKLTIFNPVNHTYFNLGERAEDLNLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALN 230 (338)
T ss_dssp TTS-EEEEEEEEEESSSEECBCEECCEECTTSCGGGCEEEECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHT
T ss_pred CCC-EEEEEEEEECCCCCCEECCCCCEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
T ss_conf 388-5999999714764410225447898887640015653356599847545657871136797331448622132231
Q ss_pred ---------CCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC-----------CCCEEEEECCC
Q ss_conf ---------3246047882478887627999968997599999859977599964886-----------78839993254
Q T0524 227 ---------KQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-----------KQGYLCPEPYT 286 (325)
Q Consensus 227 ---------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~-----------~~~~vciEP~t 286 (325)
..+|++|..... ...+.+. .++++|.+++++ +.+++||+.. ....||||||
T Consensus 231 ~~~~~~~~~~G~D~~fvl~~~----~~~a~l~--~~g~~l~v~td~--p~~qvYT~~~l~~~~~~~~~~~~~giclEpq- 301 (338)
T 3imh_A 231 SDDSQIKLRNGLDHPFILNGN----NPAALLS--SNKHRLIVKTNA--PALVLYAGNHFNHTGIVNNIGQYDGITFEAQ- 301 (338)
T ss_dssp SCCHHHHHHTSCEEEEEECSC----SCSEEEE--CSSEEEEEEESS--SEEEEECCTTCCSBTTBTTCCTTSCEECEEE-
T ss_pred CCCHHCCCCCCCCCCEECCCC----CCEEEEE--CCCCEEEEEECC--CEEEEECCCCCCCCCCCCCCCCCCEEEEECC-
T ss_conf 430111125688742674799----7489996--588289999789--9899988887787666788897078999443-
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEECC
Q ss_conf 78887888877763675897899769999999998617
Q T0524 287 WVTNAVNLDLPSSLTGLQVLEPGEETTAKSSITIELNH 324 (325)
Q Consensus 287 ~~~da~n~~~~~~~~g~~~L~PGe~~~~~~~i~ie~~~ 324 (325)
++|||+|. + +.++|+|||+++.++++++|--|
T Consensus 302 ~~Pda~N~--~----~~ivL~pge~y~~~t~y~F~~~~ 333 (338)
T 3imh_A 302 CPPAEGND--L----GQITLLPFEKFKRTVDWKFEEGH 333 (338)
T ss_dssp SCCCSSSC--C----GGGEECTTCCEEEEEEEEEEECC
T ss_pred CCCCCCCC--C----CCEEECCCCEEEEEEEEEEECCC
T ss_conf 79998665--8----98189899999899999980787
No 6
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=0 Score=296.56 Aligned_cols=301 Identities=19% Similarity=0.237 Sum_probs=232.1
Q ss_pred CEEEEEEECC-CEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEECCCEEEECCEEEEEC
Q ss_conf 8159999879-739999921384999999899974399668995886388732450006654042198798799799944
Q T0524 12 GTPAIKAGNE-HLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYHFD 90 (325)
Q Consensus 12 G~~~i~L~n~-~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~~~Ri~~g~f~~~G~~~~l~ 90 (325)
..+.|+|+|+ +++|.|++ +||.|.||+.++ ++++..++..+.+..++.++|+.++|++|||++|.|.++|++|+|+
T Consensus 9 ~~~~itl~n~~~~~~~i~~-~GA~i~~l~~~~--~~vvlg~~~~~~Y~~~~~~~Ga~iGr~ANRI~~g~f~~~G~~y~L~ 85 (342)
T 1yga_A 9 KYGVITIGDEKKFQATIAP-LGATLVDLKVNG--QSVVQGYSNVQDYLTDGNMMGATVGRYANRIAKGVFSLDDGPHKLT 85 (342)
T ss_dssp TTCCEEEEETTTEEEEEET-BTTEEEEEEETT--EECBCCCSSGGGGTTCSSCTTCEECSBCSEEGGGEEEETTEEEECC
T ss_pred EEEEEEEECCCCEEEEEEC-CCEEEEEEEECC--EEEEECCCCHHHHHCCCCCCCCEECCCCCEEECCEEEECCEEEECC
T ss_conf 5999999789966999987-790999999999--5889479998998118981652844555747688999999999926
Q ss_pred CCCCCCCCCCCCCCC-CCCEEEEEEE-CCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECC--CEEEEEEEEEECC
Q ss_conf 689866555687656-6216999821-36782499999984578850046984499999999758--9089999998477
Q T0524 91 INEKDKHNHLHGFLY-HEKWNVVTTK-QTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKE--NTLFKHATVMNKG 166 (325)
Q Consensus 91 ~~~~~~~~~~HG~~~-~~~w~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~--~~L~i~~~v~N~g 166 (325)
+|++...++.|+..+ .+.|++...+ .+.....+++.+....+++...+||++++++++|+|.+ .+|+++++++|.+
T Consensus 86 ~Ne~~~~lhgg~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~GfPg~~~~~v~y~L~~~~~~L~i~~~~~n~~ 165 (342)
T 1yga_A 86 VNNCGNTNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDMEYQAQLVR 165 (342)
T ss_dssp CCBTTBEETTGGGCGGGSBCEECCCEEEETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEECCC
T ss_conf 78898734424699772688899964278745999999930467886578216899999999922676237899996366
Q ss_pred CCEEEEEHHHCCEEEECC-------CCEEEEECCCCEEEECC-CCCCCCCCCCC-CCCCCCCCCCCCCCC--CCCEEEEE
Q ss_conf 861553100145365079-------97199984770788767-65788741357-873434466105733--24604788
Q T0524 167 KEAFPWGIGYHTTFIFPA-------ESSLFSLTADQQWELDE-RLLPTGKLMDV-PYKEALHEGMDLRHK--QLDDVFLS 235 (325)
Q Consensus 167 ~~~~p~~~~~H~yf~~~~-------~~~~l~~~~~~~~~~d~-~~~pt~~~~~~-~~~~~~~~~~~~~~~--~~d~~~~~ 235 (325)
++++|+++++||||++++ .++.+.+++..++++++ ..+|+|...+. ...++++.+..+... .+|+.+..
T Consensus 166 ~~~tp~nlt~H~YFnL~g~~~~~~i~~~~l~~~a~~~~~~~d~~~~ptg~~~~~~~t~fd~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1yga_A 166 GDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDTPVFDCTFII 245 (342)
T ss_dssp SSEEECBCEECCCBCTTTTTCTTCCTTEEEEESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSSCCCCEEEEEC
T ss_pred CCCCEEEECCCCEECCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEC
T ss_conf 87746883364458556766557501258998158489805767887421430147642234641022222211013521
Q ss_pred CC----------CCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC------CCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 24----------78887627999968997599999859977599964886------788399932547888788887776
Q T0524 236 SY----------QKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG------KQGYLCPEPYTWVTNAVNLDLPSS 299 (325)
Q Consensus 236 ~~----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~------~~~~vciEP~t~~~da~n~~~~~~ 299 (325)
.. ........+.+.++.+|++|.+++++ +.+++||+.. .+.+|||||| .+|||+|++.+.
T Consensus 246 d~~~~~~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~~--p~~qvYT~n~l~~~~~~~~giclEpq-~~pda~N~~~~~- 321 (342)
T 1yga_A 246 DANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTTE--PTVHLYTGDNLCGKFVPRSGFAVQQG-RYVDAINRDEWR- 321 (342)
T ss_dssp TTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEEEEESS--SEEEEECCTTCCTTSCTTSCBEEEEE-SCSSGGGCHHHH-
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECC--CEEEEECCCCCCCCCCCCCEEEEECC-CCCCCCCCCCCC-
T ss_conf 48866431336676763589999948998099999289--98999828878997689779999799-898976674799-
Q ss_pred CCCCEEECCCCEEEEEEEEEEE
Q ss_conf 3675897899769999999998
Q T0524 300 LTGLQVLEPGEETTAKSSITIE 321 (325)
Q Consensus 300 ~~g~~~L~PGe~~~~~~~i~ie 321 (325)
+.++|+|||+++.+++++++
T Consensus 322 --~~i~L~pge~y~~~t~y~F~ 341 (342)
T 1yga_A 322 --GCVLLKRGEVYTSKTQYKFD 341 (342)
T ss_dssp --GGGEEETTCCEEEEEEEEEE
T ss_pred --CCEEECCCCEEEEEEEEEEE
T ss_conf --98588998989889999997
No 7
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, , isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=0 Score=286.18 Aligned_cols=296 Identities=18% Similarity=0.243 Sum_probs=235.1
Q ss_pred CCEEEEEEECC-CEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCC-CCCCCCCCCCCCCCEECCCEEEECCEEEE
Q ss_conf 98159999879-73999992138499999989997439966899588638-87324500066540421987987997999
Q T0524 11 LGTPAIKAGNE-HLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHD-TPTLYGIPILFPPNRISDGTFSFRGRTYH 88 (325)
Q Consensus 11 ~G~~~i~L~n~-~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~-~~~~~G~p~~~~~~Ri~~g~f~~~G~~~~ 88 (325)
.....++|+|+ +++++|++ +||.|.+|+..+ .+++..++....|.. ++.++|+.+||++|||++|.|.++|++|+
T Consensus 371 ~~~~~~t~~n~~~~~v~~~~-~Ga~i~~~~~~~--~~vvlg~~~~~~y~~~~~~y~Ga~iGr~anRI~~g~~~~~g~~y~ 447 (699)
T 1z45_A 371 YDARFVTIGAGTRFQATFAN-LGASIVDLKVNG--QSVVLGYENEEGYLNPDSAYIGATIGRYANRISKGKFSLCNKDYQ 447 (699)
T ss_dssp TTSEEEEESTTSSEEEEEES-BTTCEEEEEETT--EECBCCCSSHHHHTCTTCCCTTCEECSBCSEEGGGEEEETTEEEE
T ss_pred CCEEEEEEECCCCEEEEEEE-CCCEEEEECCCC--CEEEECCCCHHHHCCCCCCEECCCCCCCCCEEECCEEEECCEEEE
T ss_conf 31279999448736999981-685999967199--788837999899707899741867557668686889999999999
Q ss_pred ECCCCCCCCCCCCCCC---CCCCEEEEEEE-CCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEC--CCEEEEEEEE
Q ss_conf 4468986655568765---66216999821-3678249999998457885004698449999999975--8908999999
Q T0524 89 FDINEKDKHNHLHGFL---YHEKWNVVTTK-QTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIK--ENTLFKHATV 162 (325)
Q Consensus 89 l~~~~~~~~~~~HG~~---~~~~w~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~--~~~L~i~~~v 162 (325)
|++|++ .+++||.. ..+.|+....+ .+....++++.+ .+++...|||+++.++++|+|+ ++.|++.++.
T Consensus 448 l~~N~~--~~~lHGg~~g~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~~~~G~PG~l~~~v~y~l~~~~~~l~i~~~~ 522 (699)
T 1z45_A 448 LTVNNG--VNANHSSIGSFHRKRFLGPIIQNPSKDVFTAEYML---IDNEKDTEFPGDLLVTIQYTVNVAQKSLEIVYKG 522 (699)
T ss_dssp CCCCBT--TBEETTGGGCGGGSBCEEEEEEEEETTEEEEEEEE---EECGGGSSSSSEEEEEEEEEEETTTTEEEEEEEE
T ss_pred ECCCCC--CCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEE---ECCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEE
T ss_conf 278999--98778998888854886777750788669999998---8898889988078999999996699917999999
Q ss_pred EECCCCEEEEEHHHCCEEEECC------CCEEEEECCCCEEEECCCCCCCCCCCCC-CCCCCCCCCCCCC--CCCCCEEE
Q ss_conf 8477861553100145365079------9719998477078876765788741357-8734344661057--33246047
Q T0524 163 MNKGKEAFPWGIGYHTTFIFPA------ESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLR--HKQLDDVF 233 (325)
Q Consensus 163 ~N~g~~~~p~~~~~H~yf~~~~------~~~~l~~~~~~~~~~d~~~~pt~~~~~~-~~~~~~~~~~~~~--~~~~d~~~ 233 (325)
++++++++|++++.|+||++.+ .++.|.++++..+++|+..+|||.+.++ ...+|++.+..+. ...+|++|
T Consensus 523 ~~~~d~~t~~n~tnH~YfNL~g~~~~~i~~h~l~i~a~~~~~~d~~~iPtG~~~~v~~t~~d~~~~~~i~~~~~~~d~~~ 602 (699)
T 1z45_A 523 KLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQFDCCF 602 (699)
T ss_dssp EEEESSEEECBCEECCEECTTTTSCSSSTTEEEEESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCCCEEEE
T ss_pred EECCCCCEEEECCCCCEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCEECCCCCCCCCCCEECCCCCCCCCCEE
T ss_conf 70577523655146441723788775424429984678497407877758870406799987888603576688987228
Q ss_pred EECCCCC---------CCCCEEEEEECCCCEEEEEEECCCCCEEEEECCC------CCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 8824788---------8762799996899759999985997759996488------678839993254788878888777
Q T0524 234 LSSYQKR---------GGENQAVIYHQHAHISIIYKADEQFKHWVVYNAD------GKQGYLCPEPYTWVTNAVNLDLPS 298 (325)
Q Consensus 234 ~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~------~~~~~vciEP~t~~~da~n~~~~~ 298 (325)
....... .....+.+.+|.+|++|++.+++ |.+++||+. +.+..||||||. +|||+|++.+.
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~l~v~t~~--p~~~~yt~n~~~~~~~~~~g~~lE~q~-~pda~n~~~f~ 679 (699)
T 1z45_A 603 VVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLSTE--PTYQFYTGDFLSAGYEARQGFAIEPGR-YIDAINQENWK 679 (699)
T ss_dssp ESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEESS--SEEEEECCTTCCTTCCTTSCEEEEEES-CSSGGGCTTTG
T ss_pred EECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECC--CEEEEECCCCCCCCCCCCCEEEEECCC-CCCCCCCCCCC
T ss_conf 867987643334667872499999908989889999689--769996899889887998889982689-98866786899
Q ss_pred CCCCCEEECCCCEEEEEEEEEE
Q ss_conf 6367589789976999999999
Q T0524 299 SLTGLQVLEPGEETTAKSSITI 320 (325)
Q Consensus 299 ~~~g~~~L~PGe~~~~~~~i~i 320 (325)
+ .++|+|||++...+.+++
T Consensus 680 ~---~i~l~~g~~y~~~t~y~F 698 (699)
T 1z45_A 680 D---CVTLKNGETYGSKIVYRF 698 (699)
T ss_dssp G---GGEEETTCEEEEEEEEEE
T ss_pred C---CEECCCCCEEEEEEEEEE
T ss_conf 8---655399598988999997
No 8
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=0 Score=284.87 Aligned_cols=291 Identities=20% Similarity=0.249 Sum_probs=229.2
Q ss_pred EEEEEEECCCEEEEEECCCCCEEEEEEEC---CCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEECCCEEEECCEEEEE
Q ss_conf 15999987973999992138499999989---997439966899588638873245000665404219879879979994
Q T0524 13 TPAIKAGNEHLEMIVVPEWGSNVISLVDK---TTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYHF 89 (325)
Q Consensus 13 ~~~i~L~n~~l~~~i~p~~Ga~i~s~~~~---~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~~~Ri~~g~f~~~G~~~~l 89 (325)
++.++|+|+.+++.|++ +||.|.||+.+ |+..+++..++..+.+..++.++|+.++|++|||++|.|.++|++|+|
T Consensus 21 v~~~tl~n~~~~v~i~~-~GA~i~~l~~~~~~G~~~~vvlg~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~~y~l 99 (344)
T 1snz_A 21 VEKFQLQSDLLRVDIIS-WGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHL 99 (344)
T ss_dssp EEEEEEECSSCEEEEET-BTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTTCEECSBCSEEGGGEEEETTEEEEC
T ss_pred EEEEEEECCCEEEEEEC-CCCEEEEEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCEEEEECCCEECCEEEECCEEEEC
T ss_conf 99999987999999977-59099999988889988772778999899942788668786527882599989989999981
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCE
Q ss_conf 46898665556876566216999821367824999999845788500469844999999997589089999998477861
Q T0524 90 DINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKHATVMNKGKEA 169 (325)
Q Consensus 90 ~~~~~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i~~~v~N~g~~~ 169 (325)
+.|++...++.|++.+...|+....... .+ .+.+. +.+...+||+.+.++++|+|.++.+.++++ |.++++
T Consensus 100 ~~n~~~~~~~g~~~~~~~~~~~~~~~~~--~v--~~~~~---~~~~~~g~Pg~~~~~v~y~l~~~~~~~~~~--~~~~~~ 170 (344)
T 1snz_A 100 AINKEPNSLHGGVRGFDKVLWTPRVLSN--GV--QFSRI---SPDGEEGYPGELKVWVTYTLDGGELIVNYR--AQASQA 170 (344)
T ss_dssp CCTBTTBEETTSSSCGGGSBCEEEEETT--EE--EEEEE---ECTTGGGCCSCEEEEEEEEEETTEEEEEEE--EEESSC
T ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCC--EE--EEEEE---ECCCCCCCCCCEEEEEEEEECCCCEEEEEE--CCCCCC
T ss_conf 6788986433578860268988315442--69--99998---067768987415589999904882377884--157878
Q ss_pred EEEEHHHCCEEEECC------CCEEEEECCCCEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCC------CCCCEEEEEC
Q ss_conf 553100145365079------9719998477078876765788741357-87343446610573------3246047882
Q T0524 170 FPWGIGYHTTFIFPA------ESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLRH------KQLDDVFLSS 236 (325)
Q Consensus 170 ~p~~~~~H~yf~~~~------~~~~l~~~~~~~~~~d~~~~pt~~~~~~-~~~~~~~~~~~~~~------~~~d~~~~~~ 236 (325)
+|+++++|+||+++. +.+.+.+++..++++|+..+||+...+. ....|++....+.. ...++.+...
T Consensus 171 tp~~~~~h~yfnl~~~~~~~i~~~~l~i~a~~~~~~d~~~iptg~~~~~~~~~~Df~~~~~i~~~~~~~~~~~~d~~~~~ 250 (344)
T 1snz_A 171 TPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCL 250 (344)
T ss_dssp EECBCEECCCBCTTCTTCSCCTTCEEEECEEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHHTTCCCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCEECCCCCCCCCCCCCCCCEEE
T ss_conf 66322242032347554452001110003044998776457567643566883031077443521000233212553254
Q ss_pred CCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC--------------CCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 478887627999968997599999859977599964886--------------788399932547888788887776367
Q T0524 237 YQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG--------------KQGYLCPEPYTWVTNAVNLDLPSSLTG 302 (325)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~--------------~~~~vciEP~t~~~da~n~~~~~~~~g 302 (325)
.........+.+.++.++++|.+..+ .+++++||+.. .+..||||||+ +|||+|++.+ +
T Consensus 251 ~~~~~~~~~~~l~~~~s~~~l~v~s~--~p~l~vyT~~~~~~~~~~~~g~~~~~~~giclEPq~-~PDA~N~~~~----~ 323 (344)
T 1snz_A 251 KGSKEKHFCARVHHAASGRVLEVYTT--QPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQN-WPDAVNQPRF----P 323 (344)
T ss_dssp CCCSSCEEEEEEEETTTTEEEEEEES--SSEEEEECCTTCEEEEECGGGCEEETTSCBEEEEES-CTTGGGCTTS----C
T ss_pred CCCCCCCCEEEEEECCCCCEEEECCC--CCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCCCCC----C
T ss_conf 26887731389980899946787389--989999878987864437788466887899996888-9876578889----9
Q ss_pred CEEECCCCEEEEEEEEEE
Q ss_conf 589789976999999999
Q T0524 303 LQVLEPGEETTAKSSITI 320 (325)
Q Consensus 303 ~~~L~PGe~~~~~~~i~i 320 (325)
.++|+|||+++.++++++
T Consensus 324 ~~vL~pge~y~~~t~y~F 341 (344)
T 1snz_A 324 PVLLRPGEEYDHTTWFKF 341 (344)
T ss_dssp CCEECTTSCEEEEEEEEE
T ss_pred CEEECCCCEEEEEEEEEE
T ss_conf 849999898989999999
No 9
>2cir_A Hexose-6-phosphate mutarotase; mannose-6-phosphate-1-epimerase, galactose-6-phosphate-1- epimerase, hypothetical protein, isomerase; HET: BG6; 1.6A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=0 Score=298.12 Aligned_cols=271 Identities=17% Similarity=0.196 Sum_probs=190.4
Q ss_pred CEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCC-CCEECCCEEEE
Q ss_conf 05786519815999987973999992138499999989997439966899588638873245000665-40421987987
Q T0524 4 FIEKITYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGTFSF 82 (325)
Q Consensus 4 ~~~~~~~~G~~~i~L~n~~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~-~~Ri~~g~f~~ 82 (325)
.|+.+. +.....+++|+..+++|. .+||.|+||+.. ++|+||+++.+.+...+++++|+|+||| +||..+
T Consensus 2 ~~~~~~-~~~~l~~~~~~~~~a~i~-~~Ga~l~s~~~~--g~e~L~~s~~a~~~~~~~irGGiPvlfP~~G~~~~----- 72 (297)
T 2cir_A 2 PIKETD-KEVVLTHPADETTSVHIL-KYGATVYSWKLK--SEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNST----- 72 (297)
T ss_dssp CEEECS-SEEEEEETTEEEEEEEEE-TBTTEEEEEEET--TEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSS-----
T ss_pred CEEECC-CEEEEECCCCCCEEEEEE-CCCCEEEEEEEC--CEEEEECCCHHHCCCCCCCCCCCEEEEEEECCCCC-----
T ss_conf 746768-748999069997899998-789299999989--98988438777617999755888398833088988-----
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEC-CCCCCCCCCCEEEEEEEEEEECCCEEEEEEE
Q ss_conf 997999446898665556876566216999821367824999999845-7885004698449999999975890899999
Q T0524 83 RGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLS-ELPHVQKQFPHHAVVRMTYTIKENTLFKHAT 161 (325)
Q Consensus 83 ~G~~~~l~~~~~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~~~~~~~t~~L~~~~L~i~~~ 161 (325)
+|+.| .+++|||+|+++|++++++.++. ..+++.+.+. ++++++++|||+|+++++|+|.+++|+++++
T Consensus 73 ~g~~~---------~lp~HGfaR~~~W~v~~~~~~~~-~~v~~~l~~~~~~~~~~~~yPf~f~l~~~y~L~~~~L~~~~~ 142 (297)
T 2cir_A 73 DEHLS---------KLPQHGLARNSTWEFLGQTKENP-PTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIE 142 (297)
T ss_dssp STTGG---------GSCTTBSGGGSBCEEEEEEEETT-EEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECSSEEEEEEE
T ss_pred CCCCC---------CCCCCCCCCCCCEEEEEECCCCC-CEEEEEEEECCCCHHHHHCCCCEEEEEEEEEECCCEEEEEEE
T ss_conf 98626---------89888522564369988605887-469999984679977982188417999999988984899999
Q ss_pred EEECC-CCEEEEEHHHCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 98477-86155310014536507997199984770788767657887413578734344661057332460478824788
Q T0524 162 VMNKG-KEAFPWGIGYHTTFIFPAESSLFSLTADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQKR 240 (325)
Q Consensus 162 v~N~g-~~~~p~~~~~H~yf~~~~~~~~l~~~~~~~~~~d~~~~pt~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 240 (325)
|+|+| +++|||++|+||||++++...............|.. . +. ......+.......+|++|.....
T Consensus 143 v~N~g~~~~mpf~~G~HpYF~v~~~~~~~~~~l~~~~~~d~~-~--~~------~~~~~~~~~~~~~~~D~vy~~~~~-- 211 (297)
T 2cir_A 143 VENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQL-L--KE------SYVDKHPVVTFNQETDVIYQNVSA-- 211 (297)
T ss_dssp EECCCSSCCEEEEEEECCEEECSCGGGEEEESCTTCEEEETT-T--TE------EEECCSSSBCCSSCEEEEECCCCT--
T ss_pred EEECCCCCCEEEEEECCCEEECCCCCCEEECCCCCCEEEEEC-C--CC------CCCCCCCCCCCCCCEEEEECCCCC--
T ss_conf 991997742287785262684486452388268886056403-6--77------625678724168540479827998--
Q ss_pred CCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC--------------CCCEEEEECCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 87627999968997599999859977599964886--------------7883999325478887888877763675897
Q T0524 241 GGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG--------------KQGYLCPEPYTWVTNAVNLDLPSSLTGLQVL 306 (325)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~--------------~~~~vciEP~t~~~da~n~~~~~~~~g~~~L 306 (325)
...+.+.+ .+.++.+...+.+++++||||+. .+.||||||++ ..++++|
T Consensus 212 --~~~i~~~~--~~~~~~~~~~~~~~~~vvWnP~~~~~~~~~d~ep~~~~~~~vCVEp~~-------------~~~~v~L 274 (297)
T 2cir_A 212 --ERAIQIVD--KGVQIHTLKRYNLPDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGH-------------VHDFISL 274 (297)
T ss_dssp --TCCEEEEE--TTEEEEEEEEESCCEEEEEECHHHHHHHCTTCCSTTGGGGEEEEEEEE-------------EEEEEEE
T ss_pred --CEEEEEEC--CCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCC-------------CCCCEEE
T ss_conf --73999958--996099999389997999799744676111148887647989989455-------------7998898
Q ss_pred CCCCEEEEEEEEEEE
Q ss_conf 899769999999998
Q T0524 307 EPGEETTAKSSITIE 321 (325)
Q Consensus 307 ~PGe~~~~~~~i~ie 321 (325)
+|||+|+.+++|+.+
T Consensus 275 ~PGes~~~~q~l~~~ 289 (297)
T 2cir_A 275 APGKKWNAYQLLCKE 289 (297)
T ss_dssp CTTCEEEEEEEEECC
T ss_pred CCCCEEEEEEEEECC
T ss_conf 999969999999536
No 10
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, mutarotase, YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=0 Score=278.23 Aligned_cols=265 Identities=15% Similarity=0.211 Sum_probs=199.9
Q ss_pred CCCCEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCC-CCEECCCE
Q ss_conf 97305786519815999987973999992138499999989997439966899588638873245000665-40421987
Q T0524 1 MANFIEKITYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGT 79 (325)
Q Consensus 1 ~~~~~~~~~~~G~~~i~L~n~~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~-~~Ri~~g~ 79 (325)
++..+....++++++|+|+|...+|+|+ .+||+|+||+.++ +.|+||.++...+...+++++|+||||| +|+
T Consensus 29 ~~~~~~~~~~~~l~~i~i~~~~~~a~i~-l~GA~l~Sw~~~~-~~e~Lw~s~~a~~~~~~aiRGGiPicfP~fG~----- 101 (309)
T 2hta_A 29 LTPVLSRRQLDDLDLIVVDHPQVKASFA-LQGAHLLSWKPVG-EEEVLWLSNNTPFKTGVALRGGVPICWPWFGP----- 101 (309)
T ss_dssp CSSSEEEEEETTEEEEEEEETTEEEEEE-TBTTEEEEEEETT-SCCCBCBCTTCCCCTTCCCSBSBCEEBSCCSS-----
T ss_pred CCCCEEEEEECCCCEEEEECCCEEEEEE-CCCCEEEEEEECC-CCEEEEECCHHHCCCCCCCCCCCEEEEEECCC-----
T ss_conf 5873678852996589997899899998-8898998999499-98889808254036888767888698623289-----
Q ss_pred EEECCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEE
Q ss_conf 98799799944689866555687656621699982136782499999984578850046984499999999758908999
Q T0524 80 FSFRGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKH 159 (325)
Q Consensus 80 f~~~G~~~~l~~~~~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i~ 159 (325)
....++|+|||+|++.|++.+.++++++..++ +.+.+++++++.|||+|+++++|+|.. +
T Consensus 102 -------------~~~~~lp~HGFAR~~~W~l~~~~~~~~~~~v~--~~L~~~~~t~~~~P~~f~l~~~~~L~~-----~ 161 (309)
T 2hta_A 102 -------------AAQQGLPSHGFARNLPWALKAHNEDDNGVMLT--FELQSSEATRKYWPHDFTLLARFKVGK-----T 161 (309)
T ss_dssp -------------CSSTTCCTTBSGGGSBCEEEEEEECSSCEEEE--EEEECCHHHHHHSCCCCEEEEEEEESS-----S
T ss_pred -------------CCCCCCCCCCCEECCCEEEEEECCCCCCEEEE--EEECCCCCHHHHCCEEEEEEEEEECCC-----E
T ss_conf -------------98788987633126854899843889818999--997898302331750079999998686-----5
Q ss_pred EEEEECCCCEEEEEHHHCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 99984778615531001453650799719998477078876765788741357873434466105733246047882478
Q T0524 160 ATVMNKGKEAFPWGIGYHTTFIFPAESSLFSLTADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQK 239 (325)
Q Consensus 160 ~~v~N~g~~~~p~~~~~H~yf~~~~~~~~l~~~~~~~~~~d~~~~pt~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 239 (325)
++|+|+++++|||++|+||||++++... +.+........|... ..... ....+........|.+|..
T Consensus 162 l~v~N~~~~~~pf~~glHpYF~V~d~~~-~~v~gl~~~~~D~~~--~~~~~------~~~~~~~~~~~~~driy~~---- 228 (309)
T 2hta_A 162 CEIELEAHGEFATTSALHSYFNVGDIAN-VKVSGLGDRFIDKVN--DAKEG------VLTDGIQTFPDRTDRVYLN---- 228 (309)
T ss_dssp EEEEEEEESSEEEEEEECCEEECSCGGG-CEEECCCSEEEETTT--TTEEE------ECSSSCEECSSCEEEEESS----
T ss_pred EEEEECCCCCCCCCCCCCCEEECCCHHC-CEEECCCCCCCCCCC--CCCCC------EECCCCCCCCCCEEEEECC----
T ss_conf 9999745885101502584066576002-089767853030355--75442------5258855246855799758----
Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCC-------------CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 88762799996899759999985997759996488-------------67883999325478887888877763675897
Q T0524 240 RGGENQAVIYHQHAHISIIYKADEQFKHWVVYNAD-------------GKQGYLCPEPYTWVTNAVNLDLPSSLTGLQVL 306 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~-------------~~~~~vciEP~t~~~da~n~~~~~~~~g~~~L 306 (325)
....+.+.++..+++|.+..+ .++++|||||+ ++++||||||++.. ..+.|
T Consensus 229 --~~~~~~i~d~~~~r~i~i~~~-g~~~~VVWnP~~~~a~~m~D~~~~~~~~fvCVEP~~~~-------------~~~~~ 292 (309)
T 2hta_A 229 --PEACSVIHDATLNRTIDVVHH-HHLNVVGWNPGPALSVSMGDMPDDGYKTFVCVETVYAT-------------APQQA 292 (309)
T ss_dssp --CCSEEEEEETTTTEEEEEEEE-SCSEEEEEECHHHHHHHCTTSCTTGGGGEEEEEEEEEE-------------EEEEE
T ss_pred --CCCCEEEEECCCCCEEEEEEC-CCCEEEEECCCHHHCCCCCCCCCCCCCCEEEECCCCCC-------------CCCCC
T ss_conf --998689997899988999974-99839997963464230123766788888997980069-------------98453
Q ss_pred CCCCEEEEEEEEEEE
Q ss_conf 899769999999998
Q T0524 307 EPGEETTAKSSITIE 321 (325)
Q Consensus 307 ~PGe~~~~~~~i~ie 321 (325)
.||++++.+++|+|+
T Consensus 293 ~~g~~~~~~q~i~v~ 307 (309)
T 2hta_A 293 TEEKPSRLAQTICVA 307 (309)
T ss_dssp BTTBCEEEEEEEEEE
T ss_pred CCCCCEEEEEEEEEE
T ss_conf 799967999999997
No 11
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=4e-43 Score=260.85 Aligned_cols=250 Identities=14% Similarity=0.120 Sum_probs=184.3
Q ss_pred CCCCEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCC-CCEECCCE
Q ss_conf 97305786519815999987973999992138499999989997439966899588638873245000665-40421987
Q T0524 1 MANFIEKITYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGT 79 (325)
Q Consensus 1 ~~~~~~~~~~~G~~~i~L~n~~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~-~~Ri~~g~ 79 (325)
|+..++.+.++++++|+|+|...+|.|. .+||+|+||+.++.+.++||.++.+.+...+++++|+|+||| +|+
T Consensus 9 ~~~~~~~~~~~~l~~~~l~~~~~~a~i~-l~Ga~l~s~~~~~g~~~~Lw~s~~a~~~~~~~IRGGiPv~fP~fG~----- 82 (270)
T 1jov_A 9 LTPELHLVQHNDIPVLHLKHAVGTAKIS-LQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGG----- 82 (270)
T ss_dssp EETTEEEEEETTEEEEEEEETTEEEEEE-TBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGG-----
T ss_pred CCCCEEEEECCCCCEEEEECCCEEEEEE-CCCCEEEEEEECCCCEEEEEECCHHHCCCCCCCCCCCEECCCCCCC-----
T ss_conf 4895377602990289994899899998-9996899999799980379948478637999634866264530399-----
Q ss_pred EEECCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEE
Q ss_conf 98799799944689866555687656621699982136782499999984578850046984499999999758908999
Q T0524 80 FSFRGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKH 159 (325)
Q Consensus 80 f~~~G~~~~l~~~~~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i~ 159 (325)
.+.|+|||+|+++|++.+++.+.....+++.+ ..||+.|+++++|+|+ ++
T Consensus 83 ----------------~~~p~HGFAR~~~W~l~~~~~~~~~~~l~~~l---------~~~~~~~~~~~~~~lt-----~~ 132 (270)
T 1jov_A 83 ----------------VKQPAHGTARIRLWQLSHYYISVHKVRLEFEL---------FSDLNIIEAKVSMVFT-----DK 132 (270)
T ss_dssp ----------------GSSSTTBSGGGSBCEEEEEEEETTEEEEEEEE---------ECTTSCEEEEEEEEES-----SS
T ss_pred ----------------CCCCCCCCCCCCCEEEEEECCCCCEEEEEECC---------CCCCCCCCEEEEEEEC-----CE
T ss_conf ----------------99898975127624997761776238997234---------5787632189999934-----23
Q ss_pred EEEEECCCCEEEEEHHHCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 99984778615531001453650799719998477078876765788741357873434466105733246047882478
Q T0524 160 ATVMNKGKEAFPWGIGYHTTFIFPAESSLFSLTADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQK 239 (325)
Q Consensus 160 ~~v~N~g~~~~p~~~~~H~yf~~~~~~~~l~~~~~~~~~~d~~~~pt~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 239 (325)
++++|+++.++||++|+||||++++............. .++.. ...... ... .......|.+|...
T Consensus 133 ~~v~n~~~~~~~f~~glHpYF~v~d~~~~~v~gl~~~~-~~~~~---~~~~~~------~~~-~~~~~~~d~iy~~~--- 198 (270)
T 1jov_A 133 CHLTFTHYGEESAQAALHTYFNIGDINQVEVQGLPETC-FNSLN---QQQENV------PSP-RHISENVDCIYSAE--- 198 (270)
T ss_dssp EEEEEEECCSSCEEEEECCEEECSCGGGEEEESCCSEE-EETTT---TEEEEC------CSS-BCCSSCEEEEEECS---
T ss_pred EEEEECCCCCCEEEEEEEEEEECCCCCCEEEECCCCCC-EECCC---CCCEEC------CCC-CCCCCCEEEEEECC---
T ss_conf 79997469971477754012751783216996788644-10001---532103------787-13577787999179---
Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC----------CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 887627999968997599999859977599964886----------7883999325478887888877763675897899
Q T0524 240 RGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG----------KQGYLCPEPYTWVTNAVNLDLPSSLTGLQVLEPG 309 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~----------~~~~vciEP~t~~~da~n~~~~~~~~g~~~L~PG 309 (325)
...+.+.++..+++|.+... .+++++||||+. ++.||||||+.. ...|+||
T Consensus 199 ---~~~~~i~d~~~~~~i~i~~~-g~~~~vVWnP~~~~a~~m~d~~~~~fvCVEpa~~---------------~~~L~PG 259 (270)
T 1jov_A 199 ---NMQNQILDKSFNRTIALHHH-NASQFVLWNPWHKKTSGMSETGYQKMLCLETARI---------------HHLLEFG 259 (270)
T ss_dssp ---SSEEEEEETTTTEEEEEEEE-SCSEEEEEECTTSCCTTCCTTGGGGEEEEEEEEE---------------EEEECTT
T ss_pred ---CCCEEEEECCCCCEEEEEEC-CCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCC---------------CCCCCCC
T ss_conf ---98789997899988999984-9996899797410004174478867899792677---------------7608899
Q ss_pred CEEEEEEEEE
Q ss_conf 7699999999
Q T0524 310 EETTAKSSIT 319 (325)
Q Consensus 310 e~~~~~~~i~ 319 (325)
|+++++++|+
T Consensus 260 es~t~~~~i~ 269 (270)
T 1jov_A 260 ESLSVEISLK 269 (270)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEEE
T ss_conf 9199999992
No 12
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=96.44 E-value=0.029 Score=29.42 Aligned_cols=131 Identities=14% Similarity=0.146 Sum_probs=62.2
Q ss_pred EEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCC-CCEECCCEEEECCEEEEECCC
Q ss_conf 5999987973999992138499999989997439966899588638873245000665-404219879879979994468
Q T0524 14 PAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGTFSFRGRTYHFDIN 92 (325)
Q Consensus 14 ~~i~L~n~~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~-~~Ri~~g~f~~~G~~~~l~~~ 92 (325)
+.|+++|+.++++|- ..||+|.|+..|. +-...+ ...|.. ++.. .++..-..+.+. ..+
T Consensus 4 ~~itv~nd~~~~~is-~~Gg~I~~~~Lk~----y~~~~~-----~~~p~~----L~~~~~~~~~~~~~g~~------~~~ 63 (280)
T 3bs6_A 4 KLISVKTDVLDLTIN-TRGGDVEQALLPA----YPKELN-----STQPFQ----LLETSPQFIYQAQSGLT------GRD 63 (280)
T ss_dssp CEEEEECSSCEEEEE-TBTTEEEEEEEEE----EESSTT-----CCSEEE----EEEEETTEEEEEEEEEE------STT
T ss_pred CEEEEECCCEEEEEE-CCCCEEEEEECCC----CCCCCC-----CCCCEE----ECCCCCCCEEEEEEEEE------CCC
T ss_conf 199998896999998-9997785878157----854427-----999859----72689985147861000------257
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCE--EEEEEEEEECCCCEE
Q ss_conf 986655568765662169998213678249999998457885004698449999999975890--899999984778615
Q T0524 93 EKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENT--LFKHATVMNKGKEAF 170 (325)
Q Consensus 93 ~~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~--L~i~~~v~N~g~~~~ 170 (325)
......+..-..++................+.++.... -...++.+|+|.++. +.++++|+|.+..+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vt~~~~~~----------~g~~v~k~ytf~~d~Y~i~~~~~v~N~s~~~~ 133 (280)
T 3bs6_A 64 GPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDA----------AGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPL 133 (280)
T ss_dssp CTTSGGGSSCCBCBCSCSEEECCTTCSEEEEEEEEECT----------TCCEEEEEEEEETTCCEEEEEEEEECCSSSCE
T ss_pred CCCCCCCCCCCCEEECCCCEEECCCCCCEEEEEEEECC----------CCEEEEEEEEECCCCEEEEEEEEEEECCCCCC
T ss_conf 87764677774348447723754898507999999879----------98599999998899578999999992688864
Q ss_pred EEEH
Q ss_conf 5310
Q T0524 171 PWGI 174 (325)
Q Consensus 171 p~~~ 174 (325)
....
T Consensus 134 ~~~~ 137 (280)
T 3bs6_A 134 EISS 137 (280)
T ss_dssp EEEE
T ss_pred CCCE
T ss_conf 1143
No 13
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=95.63 E-value=0.072 Score=27.22 Aligned_cols=45 Identities=20% Similarity=0.352 Sum_probs=37.6
Q ss_pred CEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEE
Q ss_conf 057865198159999879739999921384999999899974399
Q T0524 4 FIEKITYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLL 48 (325)
Q Consensus 4 ~~~~~~~~G~~~i~L~n~~l~~~i~p~~Ga~i~s~~~~~~~~~~l 48 (325)
.+....++|.+=|.++|+.+.+.|.|..||.|.+|..++....+.
T Consensus 389 ~~~D~d~DG~~Ei~~~~~~~~~~~~~~~gg~i~E~d~~~~~~N~~ 433 (659)
T 1k1x_A 389 KILDVDFDGRAEIMVENDGFIATIKPHYGGSIFELSSKRKAVNYN 433 (659)
T ss_dssp EEECSSSSSSCEEEEECSSEEEEEETTTTTEEEEEEETTTTEETT
T ss_pred EEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCC
T ss_conf 541347899868999769668999138984799960565221200
No 14
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic domain, transmembrane, chaperone; 2.50A {Escherichia coli K12}
Probab=95.43 E-value=0.085 Score=26.81 Aligned_cols=131 Identities=15% Similarity=0.167 Sum_probs=61.0
Q ss_pred EEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCC-CCEECCCEEEECCEEEEECCC
Q ss_conf 5999987973999992138499999989997439966899588638873245000665-404219879879979994468
Q T0524 14 PAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGTFSFRGRTYHFDIN 92 (325)
Q Consensus 14 ~~i~L~n~~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~-~~Ri~~g~f~~~G~~~~l~~~ 92 (325)
+.|+++|+.++++|- .+||.|.++..|. +-...+ ...|... +.. .++.....+.+-+ .+
T Consensus 35 ~~itvetd~~~~~~s-~~GG~I~~~~Lk~----y~~~~~-----~~~p~~l----~~~~~~~~~~~~~~l~~------~~ 94 (330)
T 3blc_A 35 KLISVKTDVLDLTIN-TRGGDVEQALLPA----YPKELN-----STQPFQL----LETSPQFIYQAQSGLTG------RD 94 (330)
T ss_dssp CEEEEECSSCEEEEE-TBTCCEEEEEEEE----EESSTT-----CSSEEEE----EEECSSCEEEEEEEEES------TT
T ss_pred CEEEEECCCEEEEEE-CCCCEEEEEECCC----CCCCCC-----CCCCEEE----CCCCCCCCEEEEEEEEC------CC
T ss_conf 879998897999997-9997785866167----853327-----9998497----05898762156541012------67
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCE--EEEEEEEEECCCCEE
Q ss_conf 986655568765662169998213678249999998457885004698449999999975890--899999984778615
Q T0524 93 EKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENT--LFKHATVMNKGKEAF 170 (325)
Q Consensus 93 ~~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~--L~i~~~v~N~g~~~~ 170 (325)
......+..-..+................+++++.. .. -.+.++.+|+|.++. +.++++|+|.|..++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vtf~~~--~~--------~g~~v~k~ytf~~~~Y~i~~~~~v~N~s~~~~ 164 (330)
T 3blc_A 95 GPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYT--DA--------AGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPL 164 (330)
T ss_dssp CTTSGGGCSCCBCBCSCSEEECCTTCCEEEEEEEEE--CT--------TSCEEEEEEEEETTCCEEEEEEEEECCSSSCE
T ss_pred CCCCCCCCCCCCEEECCCEEEECCCCCCEEEEEEEE--CC--------CCEEEEEEEEECCCCEEEEEEEEEEECCCCCC
T ss_conf 877546777752372577057348996069999998--89--------98699999998689468999999994788865
Q ss_pred EEEH
Q ss_conf 5310
Q T0524 171 PWGI 174 (325)
Q Consensus 171 p~~~ 174 (325)
....
T Consensus 165 ~~~~ 168 (330)
T 3blc_A 165 EISS 168 (330)
T ss_dssp EEEE
T ss_pred CCCC
T ss_conf 1130
No 15
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=86.61 E-value=1.1 Score=20.57 Aligned_cols=32 Identities=22% Similarity=0.299 Sum_probs=23.0
Q ss_pred EEEECCCEEEEEEEEEECCCCEEEEEHHHCCEEE
Q ss_conf 9997589089999998477861553100145365
Q T0524 148 TYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFI 181 (325)
Q Consensus 148 t~~L~~~~L~i~~~v~N~g~~~~p~~~~~H~yf~ 181 (325)
.+.|....-.++++|+|+|++|..+ |.|.-|.
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRpIQV--GSH~HF~ 49 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQV--GSHIHFV 49 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEE--ETTSCGG
T ss_pred CEEECCCCCEEEEEEEECCCCCEEE--CCCCCHH
T ss_conf 7887699977899977379864686--1655845
No 16
>1e9y_A Urease alpha subunit; hydrolase, dodecamer, acetohydroxamic acid; HET: KCX; 3.0A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=81.47 E-value=1.4 Score=19.94 Aligned_cols=32 Identities=28% Similarity=0.322 Sum_probs=22.9
Q ss_pred EEEECCCEEEEEEEEEECCCCEEEEEHHHCCEEE
Q ss_conf 9997589089999998477861553100145365
Q T0524 148 TYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFI 181 (325)
Q Consensus 148 t~~L~~~~L~i~~~v~N~g~~~~p~~~~~H~yf~ 181 (325)
.+.|....-.++++|+|+|++|..+ |.|.-|.
T Consensus 117 ~I~ln~gr~~~~l~V~N~GDRPIQV--GSH~HF~ 148 (238)
T 1e9y_A 117 DITINEGKKAVSVKVKNVGDRPVQI--GSHFHFF 148 (238)
T ss_dssp EEETTTTCCCCEEEEEECSSSCEEE--ETTSCGG
T ss_pred CCCCCCCCCEEEEEEECCCCCCEEE--CCCCCHH
T ss_conf 6013799866999995699875054--3654245
No 17
>1ejx_B Urease beta subunit; alpha-beta barrel, nickel metalloenzyme, temperature dependent structural changes, hydrolase; HET: KCX; 1.60A {Klebsiella aerogenes} SCOP: b.85.3.1 PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* 1fwe_B* 1fwf_B* 1fwg_B* 1fwh_B* ...
Probab=79.11 E-value=2.2 Score=18.82 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=23.0
Q ss_pred EEEECCCEEEEEEEEEECCCCEEEEEHHHCCEEE
Q ss_conf 9997589089999998477861553100145365
Q T0524 148 TYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFI 181 (325)
Q Consensus 148 t~~L~~~~L~i~~~v~N~g~~~~p~~~~~H~yf~ 181 (325)
.+.|....-.++++|+|+||+|..+ |.|.-|.
T Consensus 12 ~I~lN~gr~~~~l~V~N~GDRpIQV--GSH~HF~ 43 (101)
T 1ejx_B 12 QIALNTGRATCRVVVENHGDRPIQV--GSHYHFA 43 (101)
T ss_dssp EEECSTTCCEEEEEEEECSSSCEEE--ETTSCGG
T ss_pred CEEECCCCCEEEEEEEECCCCCEEE--CCCCCHH
T ss_conf 7887699967899977279863587--3545536
No 18
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, copper, zinc, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus str}
Probab=59.56 E-value=6.1 Score=16.31 Aligned_cols=15 Identities=33% Similarity=0.534 Sum_probs=11.8
Q ss_pred EECCCCEEEEEEEEE
Q ss_conf 978997699999999
Q T0524 305 VLEPGEETTAKSSIT 319 (325)
Q Consensus 305 ~L~PGe~~~~~~~i~ 319 (325)
-++||||++..++.+
T Consensus 321 pI~PGETk~v~v~a~ 335 (382)
T 1yew_A 321 PLAPGETRTVDVTAS 335 (382)
T ss_dssp CBCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEE
T ss_conf 759996248999961
No 19
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=52.78 E-value=7.9 Score=15.66 Aligned_cols=35 Identities=9% Similarity=-0.071 Sum_probs=23.9
Q ss_pred EEEEEEEEECCCEEEEEEEEEECCCCEEEEEHHHC
Q ss_conf 99999999758908999999847786155310014
Q T0524 143 AVVRMTYTIKENTLFKHATVMNKGKEAFPWGIGYH 177 (325)
Q Consensus 143 ~~~~~t~~L~~~~L~i~~~v~N~g~~~~p~~~~~H 177 (325)
.++++.+..+++..-+.++|+|.++++..+++..+
T Consensus 118 ~e~~~fV~~~~~vev~rl~l~N~s~~~r~L~l~~y 152 (807)
T 1v7w_A 118 ARKTLFVPKGEDAEIWDVVIKNTSDQVRTISAFSF 152 (807)
T ss_dssp EEEEEECCTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEE
T ss_conf 99999986999889999999969799089999999
No 20
>3isy_A Bsupi, intracellular proteinase inhibitor; NP_388994.1, intracellular proteinase inhibitor (bsupi) from bacillus subtilis, structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=47.23 E-value=9.8 Score=15.15 Aligned_cols=33 Identities=9% Similarity=0.177 Sum_probs=26.1
Q ss_pred EEEEEEEEEECCCEEEEEEEEEECCCCEEEEEH
Q ss_conf 499999999758908999999847786155310
Q T0524 142 HAVVRMTYTIKENTLFKHATVMNKGKEAFPWGI 174 (325)
Q Consensus 142 ~~~~~~t~~L~~~~L~i~~~v~N~g~~~~p~~~ 174 (325)
++.+.+...-..+.+.+.++++|.++++..+..
T Consensus 6 ~~~~~~~~~~~~e~v~~~ltl~N~~~~~v~l~F 38 (120)
T 3isy_A 6 EVVLSIDAIQEPEQIKFNMSLKNQSERAIEFQF 38 (120)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEECSSSCEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEEEECCCCCEEEEE
T ss_conf 079984100278529999999918997689897
No 21
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=42.60 E-value=12 Score=14.73 Aligned_cols=63 Identities=13% Similarity=0.201 Sum_probs=40.2
Q ss_pred CCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEC--CCEEEEEEEEEECCCCEEEEEHHHCCEEEECCCCEE
Q ss_conf 678249999998457885004698449999999975--890899999984778615531001453650799719
Q T0524 117 TDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIK--ENTLFKHATVMNKGKEAFPWGIGYHTTFIFPAESSL 188 (325)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~--~~~L~i~~~v~N~g~~~~p~~~~~H~yf~~~~~~~~ 188 (325)
+++..++++++. |.. . .++++++|++. .+.|....+|+|.|++++.+....=..+.+|.....
T Consensus 128 ~~~~~~l~i~l~--D~~-----~--~l~v~l~y~i~~~~~vi~~~~~i~N~g~~~v~l~~~~s~~l~~~~~~~~ 192 (745)
T 3mi6_A 128 DDDAQTLVVSFN--DRI-----T--GLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLNRALSSQLDLPDANYD 192 (745)
T ss_dssp CCCCEEEEEEEE--ETT-----T--CCEEEEEEEEEGGGTEEEEEEEEECCSSSCEEEEEEEEEEEEESCCCCE
T ss_pred CCCCCEEEEEEE--ECC-----C--CEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCE
T ss_conf 898518999999--679-----8--9399999999789998999999998999888985042052557865548
No 22
>3chx_A PMOB; membrane protein, copper, methane, beta barrel; 3.90A {Methylosinus trichosporium}
Probab=40.75 E-value=12 Score=14.56 Aligned_cols=15 Identities=33% Similarity=0.559 Sum_probs=10.5
Q ss_pred EECCCCEEEEEEEEE
Q ss_conf 978997699999999
Q T0524 305 VLEPGEETTAKSSIT 319 (325)
Q Consensus 305 ~L~PGe~~~~~~~i~ 319 (325)
-++|||+++..++.+
T Consensus 326 pI~PGETr~v~v~a~ 340 (392)
T 3chx_A 326 PLAPGETKTIEVKVQ 340 (392)
T ss_dssp CCCTTCCCCCCEEEE
T ss_pred CCCCCCCEEEEEEEE
T ss_conf 669996158999962
No 23
>1so9_A Cytochrome C oxidase assembly protein CTAG; immunoglobulin-like fold, copper protein, structural proteomics in europe, spine; NMR {Sinorhizobium meliloti} SCOP: b.146.1.1 PDB: 1sp0_A
Probab=32.06 E-value=6.9 Score=15.99 Aligned_cols=37 Identities=14% Similarity=0.014 Sum_probs=24.2
Q ss_pred CCCCEEEEE---EEEEEECCCEEEEEEEEEECCCCEEEEEH
Q ss_conf 469844999---99999758908999999847786155310
Q T0524 137 KQFPHHAVV---RMTYTIKENTLFKHATVMNKGKEAFPWGI 174 (325)
Q Consensus 137 ~~~P~~~~~---~~t~~L~~~~L~i~~~v~N~g~~~~p~~~ 174 (325)
.+.|+.|.- .+++.. +..-.+.+.++|.+++++.-..
T Consensus 43 ~~lpW~F~P~~~~v~V~p-Ge~~~v~y~a~N~s~~~~~g~A 82 (164)
T 1so9_A 43 AGLPWEFVPVQRDIDVRI-GETVQIMYRAKNLASTPTTGQA 82 (164)
T ss_dssp TTSCEEEECSCSEEEECT-TCCCCEEEEEEECSSSCEECCC
T ss_pred CCCCEEEEECCCCEEEEC-CCEEEEEEEEECCCCCCEEEEE
T ss_conf 995089974676558727-9878899998899998389999
No 24
>2g8g_A Capsid; adeno-associated virus serotype 4, gene therapy, icosahedral virus; HET: D5M; 3.20A {Adeno-associated virus - 4}
Probab=30.70 E-value=18 Score=13.61 Aligned_cols=17 Identities=24% Similarity=0.235 Sum_probs=8.7
Q ss_pred EEECCCCCEEEEEEECC
Q ss_conf 99921384999999899
Q T0524 26 IVVPEWGSNVISLVDKT 42 (325)
Q Consensus 26 ~i~p~~Ga~i~s~~~~~ 42 (325)
++..++=|.|.=+.+..
T Consensus 112 ~~~ndLTatv~Vf~D~~ 128 (524)
T 2g8g_A 112 TVANNLTSTVQIFADSS 128 (524)
T ss_dssp EEEECTTCCEEEEEETT
T ss_pred EEECCCCEEEEEEECCC
T ss_conf 98247630789997689
No 25
>1s58_A B19 parvovirus capsid; icosahedral capsid, beta-barrel, icosahedral virus; 3.50A {Human parvovirus B19} SCOP: b.121.5.2
Probab=21.20 E-value=21 Score=13.24 Aligned_cols=16 Identities=25% Similarity=0.190 Sum_probs=7.1
Q ss_pred EEECCCCCEEEEEEEC
Q ss_conf 9992138499999989
Q T0524 26 IVVPEWGSNVISLVDK 41 (325)
Q Consensus 26 ~i~p~~Ga~i~s~~~~ 41 (325)
+|..++=|.|.=+.+.
T Consensus 140 t~nNdLTatv~Vf~D~ 155 (554)
T 1s58_A 140 QVTDSATGRLCMLVDH 155 (554)
T ss_dssp EECCCSSCCBCBEECS
T ss_pred EEECCCCEEEEEEECC
T ss_conf 8725764078999778
Done!