Query T0524 NP_389718.1, Bacillus subtilis, 325 residues
Match_columns 325
No_of_seqs 129 out of 1996
Neff 9.4
Searched_HMMs 15564
Date Fri May 21 18:04:42 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0524.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0524.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1z45a1 b.30.5.4 (A:358-699) G 100.0 0 0 297.1 31.2 294 13-320 16-341 (342)
2 d1lura_ b.30.5.4 (A:) Aldose 1 100.0 0 0 296.7 30.4 289 14-320 3-325 (329)
3 d1nsza_ b.30.5.4 (A:) Galactos 100.0 0 0 294.1 30.9 299 4-322 1-339 (340)
4 d1so0a_ b.30.5.4 (A:) Galactos 100.0 0 0 291.5 31.0 290 13-320 21-341 (344)
5 d1jova_ b.30.5.7 (A:) Hypothet 100.0 5.6E-45 0 270.3 24.8 250 1-319 9-269 (269)
6 d1k1xa2 b.30.5.8 (A:385-659) 4 95.5 0.058 3.7E-06 26.9 14.2 159 2-174 3-190 (275)
7 d4ubpb_ b.85.3.1 (B:) Urease, 88.3 0.55 3.5E-05 21.3 5.4 31 149-181 15-45 (122)
8 d4ubpb_ b.85.3.1 (B:) Urease, 82.9 1.1 7.2E-05 19.6 5.4 32 148-181 14-45 (122)
9 d1e9ya1 b.85.3.1 (A:106-238) U 82.4 0.85 5.5E-05 20.2 4.0 32 148-181 12-43 (133)
10 d1ejxb_ b.85.3.1 (B:) Urease, 78.7 1.6 0.0001 18.8 5.3 31 149-181 13-43 (101)
11 d1v7wa2 b.30.5.3 (A:1-270) Chi 69.9 2.6 0.00017 17.5 5.9 33 143-175 118-150 (270)
12 d1so9a_ b.146.1.1 (A:) Cytochr 20.7 14 0.0009 13.3 0.5 35 138-173 24-61 (131)
13 d1s58a_ b.121.5.2 (A:) Parvovi 20.5 13 0.00084 13.5 0.3 16 26-41 122-137 (536)
14 d1lp3a_ b.121.5.2 (A:) Dependo 20.2 20 0.0013 12.5 1.7 25 263-288 416-440 (519)
No 1
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=0 Score=297.09 Aligned_cols=294 Identities=18% Similarity=0.228 Sum_probs=227.1
Q ss_pred EEEEEEECCC-EEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCC-CCCCCCCCCCCCCCEECCCEEEECCEEEEEC
Q ss_conf 1599998797-3999992138499999989997439966899588638-8732450006654042198798799799944
Q T0524 13 TPAIKAGNEH-LEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHD-TPTLYGIPILFPPNRISDGTFSFRGRTYHFD 90 (325)
Q Consensus 13 ~~~i~L~n~~-l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~-~~~~~G~p~~~~~~Ri~~g~f~~~G~~~~l~ 90 (325)
.+.|+|+|+. +++.|++ +||.|.||+.++ .+++...+..+.|.. ++.+.|+.++|++|||++|.|.++|+.|+|+
T Consensus 16 ~~~~tl~n~~~~~v~i~~-~GA~i~~l~~~~--~~vvlg~d~~~~Y~~~~~~y~Ga~iGr~AnRI~~g~f~~~G~~y~L~ 92 (342)
T d1z45a1 16 ARFVTIGAGTRFQATFAN-LGASIVDLKVNG--QSVVLGYENEEGYLNPDSAYIGATIGRYANRISKGKFSLCNKDYQLT 92 (342)
T ss_dssp SEEEEESTTSSEEEEEES-BTTCEEEEEETT--EECBCCCSSHHHHTCTTCCCTTCEECSBCSEEGGGEEEETTEEEECC
T ss_pred EEEEEEECCCCEEEEEEC-CCEEEEEEEECC--EEEEECCCCHHHHHCCCCCEECCEECCCCCEEECCEEEECCEEEEEC
T ss_conf 699999899966999978-890999998999--17881799989970679863787834648834699999999999905
Q ss_pred CCCCCCCCCCCCCCC---CCCEEEEE-EECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECC--CEEEEEEEEEE
Q ss_conf 689866555687656---62169998-2136782499999984578850046984499999999758--90899999984
Q T0524 91 INEKDKHNHLHGFLY---HEKWNVVT-TKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKE--NTLFKHATVMN 164 (325)
Q Consensus 91 ~~~~~~~~~~HG~~~---~~~w~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~--~~L~i~~~v~N 164 (325)
+|++. +.+||... .+.|++.. .+.+....++++.+. +.+...+||+++.++++|+|++ ..|+++++++|
T Consensus 93 ~Ne~~--~~lHgg~~g~~~~~w~~~~~~~~~~~~~~~~~~~~---~~~~~~GfPg~~~~~vtY~L~~~~~~l~i~~~~~~ 167 (342)
T d1z45a1 93 VNNGV--NANHSSIGSFHRKRFLGPIIQNPSKDVFTAEYMLI---DNEKDTEFPGDLLVTIQYTVNVAQKSLEIVYKGKL 167 (342)
T ss_dssp CCBTT--BEETTGGGCGGGSBCEEEEEEEEETTEEEEEEEEE---ECGGGSSSSSEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred CCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEE---CCCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEC
T ss_conf 78997--65654457877144577887416773489999988---89877780068999999999235785089999950
Q ss_pred CCCCEEEEEHHHCCEEEECC------CCEEEEECCCCEEEECCCCCCCCCCCCC-CCCCCCCCCCCCC--CCCCCEEEEE
Q ss_conf 77861553100145365079------9719998477078876765788741357-8734344661057--3324604788
Q T0524 165 KGKEAFPWGIGYHTTFIFPA------ESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLR--HKQLDDVFLS 235 (325)
Q Consensus 165 ~g~~~~p~~~~~H~yf~~~~------~~~~l~~~~~~~~~~d~~~~pt~~~~~~-~~~~~~~~~~~~~--~~~~d~~~~~ 235 (325)
.+++++|+++++||||++++ .+++|++++..++++|+..+|||...+. ...+++..+..+. ...+|+++..
T Consensus 168 ~~d~~tP~nl~~H~YFNL~g~~~~~i~~h~L~i~a~~~~~~d~~~iPTG~~~~v~~t~~df~~~~~i~~~~~~~d~~~~~ 247 (342)
T d1z45a1 168 TAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQFDCCFVV 247 (342)
T ss_dssp EESSEEECBCEECCEECTTTTSCSSSTTEEEEESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCCCEEEEES
T ss_pred CCCCCEEEEEECCEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEE
T ss_conf 57861488861311686168775135303788756889987466654334457778853322654345565521024410
Q ss_pred CCCC---------CCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC------CCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 2478---------887627999968997599999859977599964886------7883999325478887888877763
Q T0524 236 SYQK---------RGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG------KQGYLCPEPYTWVTNAVNLDLPSSL 300 (325)
Q Consensus 236 ~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~------~~~~vciEP~t~~~da~n~~~~~~~ 300 (325)
.... ......+.+.++.+|++|.+.++. +.+++|++.. ....||||||+ +|||+|++.+.+
T Consensus 248 d~~~~~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~~--p~~qvYT~~~~~~~~~~~~g~clEpq~-~PdA~N~~~~~~- 323 (342)
T d1z45a1 248 DENAKPSQINTLNNELTLIVKAFHPDSNITLEVLSTE--PTYQFYTGDFLSAGYEARQGFAIEPGR-YIDAINQENWKD- 323 (342)
T ss_dssp CSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEESS--SEEEEECCTTCCTTCCTTSCEEEEEES-CSSGGGCTTTGG-
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCC--CEEEEECCCCCCCCCCCCCEEEEECCC-CCCCCCCCCCCC-
T ss_conf 5887632225556764168999928989689998289--879998898678888888899995888-987557868998-
Q ss_pred CCCEEECCCCEEEEEEEEEE
Q ss_conf 67589789976999999999
Q T0524 301 TGLQVLEPGEETTAKSSITI 320 (325)
Q Consensus 301 ~g~~~L~PGe~~~~~~~i~i 320 (325)
+++|+|||++...+.+++
T Consensus 324 --~i~L~pGe~y~~~t~y~F 341 (342)
T d1z45a1 324 --CVTLKNGETYGSKIVYRF 341 (342)
T ss_dssp --GGEEETTCEEEEEEEEEE
T ss_pred --CEEECCCCEEEEEEEEEE
T ss_conf --767099698999999997
No 2
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00 E-value=0 Score=296.68 Aligned_cols=289 Identities=20% Similarity=0.277 Sum_probs=228.3
Q ss_pred EEEEEECCC-EEEEEECCCCCEEEEEEEC---CCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEECCCEEEECCEEEEE
Q ss_conf 599998797-3999992138499999989---997439966899588638873245000665404219879879979994
Q T0524 14 PAIKAGNEH-LEMIVVPEWGSNVISLVDK---TTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYHF 89 (325)
Q Consensus 14 ~~i~L~n~~-l~~~i~p~~Ga~i~s~~~~---~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~~~Ri~~g~f~~~G~~~~l 89 (325)
-.|+|+|+. +++.|++ +||.|.||+.+ |...+++..++..+.+..++.++|+.++|++|||++|.|.++|++|+|
T Consensus 3 ~~i~l~N~~g~~v~i~~-~GA~i~~l~~pd~~g~~~~vvlg~d~~~~Y~~~~~~~Ga~igr~aNRI~~g~f~~~G~~y~L 81 (329)
T d1lura_ 3 GFIEIANKQGLTATLLP-FGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQYTM 81 (329)
T ss_dssp CCEEEECSSSCEEEEET-BTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCTTCEECSBCSEEGGGEEEETTEEEEC
T ss_pred CEEEEECCCCCEEEEEC-CCCEEEEEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCEECCCCCEEECCEEEECCEEEEE
T ss_conf 67999979993999988-79299999988878988030878999899820887647582670770648869899999882
Q ss_pred CCCCCCCCCCCCCCCCC---CCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECC
Q ss_conf 46898665556876566---216999821367824999999845788500469844999999997589089999998477
Q T0524 90 DINEKDKHNHLHGFLYH---EKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKHATVMNKG 166 (325)
Q Consensus 90 ~~~~~~~~~~~HG~~~~---~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i~~~v~N~g 166 (325)
++|++ ++++||.... +.|+++....+ .. ++.+. +.+...+||++++++++|+|+++. .+.+++++.+
T Consensus 82 ~~N~~--~n~lHGg~~g~~~~~w~v~~~~~~--~v--~~~~~---~~~~~~GyPg~l~~~vtY~L~~~~-~l~i~~~a~~ 151 (329)
T d1lura_ 82 TPNNG--PHYLHGGPNGLGYRKWEVVRHAPE--SV--SFSVR---ANEQDDGLPGDAKIDVTYTVNDRN-QLIIEHHATC 151 (329)
T ss_dssp CCSBT--TBEETTCTTSGGGSBCEEEEEETT--EE--EEEEE---EEHHHHSSSSEEEEEEEEEECTTS-EEEEEEEEEC
T ss_pred CCCCC--CCCCCCCCCCCCEEEEEEEEECCC--EE--EEEEE---ECCCCCCCCCCEEEEEEEEECCCC-EEEEEEEEEE
T ss_conf 36778--863466779843677778860576--06--99998---248766765426899999982487-8999978860
Q ss_pred CCEEEEEHHHCCEEEECC----CCEEEEECCCCEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCC--------CCCEEE
Q ss_conf 861553100145365079----9719998477078876765788741357-873434466105733--------246047
Q T0524 167 KEAFPWGIGYHTTFIFPA----ESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLRHK--------QLDDVF 233 (325)
Q Consensus 167 ~~~~p~~~~~H~yf~~~~----~~~~l~~~~~~~~~~d~~~~pt~~~~~~-~~~~~~~~~~~~~~~--------~~d~~~ 233 (325)
++++|+++++|+||++.. .+++|+++++.++++|+..+|||.+.+. ...+||+.+..+... .+|++|
T Consensus 152 d~~tp~nlt~H~YFnL~~~~~i~~h~L~i~a~~~l~~d~~~iPtG~~~~v~~t~~Dfr~~~~l~~~~~~~~~~~~~d~~~ 231 (329)
T d1lura_ 152 DTPGLLALTNHAYWNLDGSDTVAEHFLEMEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEELLDLDNDL 231 (329)
T ss_dssp SSCEECBCEECCEECSSCCSCSTTCEEEECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSSCCCCCEEEE
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCE
T ss_conf 65321232466516413222355708995767199747543644321354355334436434543334544314137877
Q ss_pred EECCCCCC--CCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC------------CCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 88247888--7627999968997599999859977599964886------------788399932547888788887776
Q T0524 234 LSSYQKRG--GENQAVIYHQHAHISIIYKADEQFKHWVVYNADG------------KQGYLCPEPYTWVTNAVNLDLPSS 299 (325)
Q Consensus 234 ~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~------------~~~~vciEP~t~~~da~n~~~~~~ 299 (325)
........ ....+.+.++.+|++|++..+. +.+++|++.. .+..||||||+ +|||+|++.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~l~~~~sg~~l~v~t~~--p~~qvYT~~~l~~~~~~g~~~~~~~gi~lEpq~-~PdA~N~~~f~~ 308 (329)
T d1lura_ 232 VITKKTPPSTPSTYLRFWSEKSGIELSITTSY--PVIHLYASKFLDCKGKKGEHYKANKALAIEPQF-HSAAPNFDHFPD 308 (329)
T ss_dssp EECCCCC----CCCEEEECTTTCEEEEEEESS--SEEEEECCTTCCEECGGGCEECTTCCEEEEEES-CTTGGGCTTSCC
T ss_pred EEEECCCCCCCCEEEEEECCCCCEEEEEECCC--CEEEEECCCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCCCCCCC
T ss_conf 98531468875134899679876699996799--889996898767778798796899989997369-998546678998
Q ss_pred CCCCEEECCCCEEEEEEEEEE
Q ss_conf 367589789976999999999
Q T0524 300 LTGLQVLEPGEETTAKSSITI 320 (325)
Q Consensus 300 ~~g~~~L~PGe~~~~~~~i~i 320 (325)
++|+|||+++.++.+++
T Consensus 309 ----~~L~pge~y~~~~~y~F 325 (329)
T d1lura_ 309 ----VSLRPGDHYCQEIVYTF 325 (329)
T ss_dssp ----CEECTTCCEEEEEEEEE
T ss_pred ----EEECCCCEEEEEEEEEE
T ss_conf ----18999999988999998
No 3
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]}
Probab=100.00 E-value=0 Score=294.08 Aligned_cols=299 Identities=18% Similarity=0.221 Sum_probs=231.3
Q ss_pred CEEEEEC-CCEEEEEEECCC-EEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEECCCEEE
Q ss_conf 0578651-981599998797-39999921384999999899974399668995886388732450006654042198798
Q T0524 4 FIEKITY-LGTPAIKAGNEH-LEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFS 81 (325)
Q Consensus 4 ~~~~~~~-~G~~~i~L~n~~-l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~~~Ri~~g~f~ 81 (325)
.|+...| +|.+.|+|+|+. +++.|++ +||.|.+|+.++ ++++..++....+..++.+.|+.++|++|||++|.|.
T Consensus 1 ~~~~~~fg~~~~~~tl~N~~gl~v~i~~-~GA~i~~~~~~~--~~vvlg~d~~~~y~~~~~~~Ga~vGp~anRI~~g~f~ 77 (340)
T d1nsza_ 1 SIKIRDFGLGSDLISLTNKAGVTISFTN-LGARIVDWQKDG--KHLILGFDSAKEYLEKDAYPGATVGPTAGRIKDGLVK 77 (340)
T ss_dssp CEEEEEEETTEEEEEEECTTSCEEEEET-BTTEEEEEEETT--EESBCCCSSHHHHHHHCSCTTCEECSBCSEEGGGEEE
T ss_pred CCEECCCCCCEEEEEEECCCCCEEEEEC-CCEEEEEECCCC--CEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9367028985069999949981999979-995999820499--7589469998998308883076814536714488301
Q ss_pred ECCEEEEECCCCCCCCCCCCCCCC---CCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEE
Q ss_conf 799799944689866555687656---62169998213678249999998457885004698449999999975890899
Q T0524 82 FRGRTYHFDINEKDKHNHLHGFLY---HEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFK 158 (325)
Q Consensus 82 ~~G~~~~l~~~~~~~~~~~HG~~~---~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i 158 (325)
++|+.|+|++|++ ++++||... .+.|++...+. +....+++++.. .+...+||++++++++|+|+++. .+
T Consensus 78 ~~G~~~~L~~Ne~--~~~lHGG~~g~~~~~w~~~~~~~-~~~~~v~f~~~~---~~g~~GfPg~~~~~vtY~L~~~~-~l 150 (340)
T d1nsza_ 78 ISGKDYILNQNEG--PQTLHGGEESIHTKLWTYEVTDL-GAEVQVKFSLVS---NDGTNGYPGKIEMSVTHSFDDDN-KW 150 (340)
T ss_dssp ETTEEEECCCCBT--TBEETTSTTCGGGSBCEEEEEEC-SSEEEEEEEEEE---CTTGGGCCSCEEEEEEEEEETTC-EE
T ss_pred CCCEEEEECCCCC--CCCCCCCCCCCCCEEEEEEEECC-CCCCEEEEEEEC---CCCCCCCCCCEEEEEEEEECCCC-EE
T ss_conf 8998987168889--86213454565643566776627-886179999985---76456866416899999972698-08
Q ss_pred EEEEEECCCCEEEEEHHHCCEEEECC------CCEEEEECCCCEEEE-CCCCCCCCCCCCC-CCCCCCCCCCCCCC----
Q ss_conf 99998477861553100145365079------971999847707887-6765788741357-87343446610573----
Q T0524 159 HATVMNKGKEAFPWGIGYHTTFIFPA------ESSLFSLTADQQWEL-DERLLPTGKLMDV-PYKEALHEGMDLRH---- 226 (325)
Q Consensus 159 ~~~v~N~g~~~~p~~~~~H~yf~~~~------~~~~l~~~~~~~~~~-d~~~~pt~~~~~~-~~~~~~~~~~~~~~---- 226 (325)
.++++|.+++++|+++++||||++.+ .+++|+++++.++++ |+..+|||++.+. ...+||+....+..
T Consensus 151 ~i~~~a~~~~~tp~nlt~H~YFnL~g~~~~~i~~h~L~i~a~~~l~~~D~~~iPTG~~~~v~~t~~Dfr~~~~l~~~~~~ 230 (340)
T d1nsza_ 151 KIHYEAISDKDTVFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNS 230 (340)
T ss_dssp EEEEEEEESSCEECBCEECCEECTTSCTTSCGGGCEEEECEEEECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHTC
T ss_pred EEEEEEEECCCCEEEECCCCCEECCCCCCCCCCHHEEEECCCEEEEECCCCCCCCCEECCCCCCCCCCCCCEEECCCCCC
T ss_conf 99999982776056614665200388755642000462037579997378766575151442343245676030641013
Q ss_pred --------CCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCC-------------CCCCEEEEECC
Q ss_conf --------324604788247888762799996899759999985997759996488-------------67883999325
Q T0524 227 --------KQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNAD-------------GKQGYLCPEPY 285 (325)
Q Consensus 227 --------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~-------------~~~~~vciEP~ 285 (325)
..+|++|...... .....+.+.. ++++|+++++. +.+++||.. .....||||||
T Consensus 231 ~~~~~~~~~G~D~~fvl~~~~-~~~~~~~l~~--~~~~l~v~T~~--p~~qvYT~n~~~~~~~~~~~~~~~~~gi~lEpq 305 (340)
T d1nsza_ 231 NMEQVQLVKGIDHPFLLDQLG-LDKEQARLTL--DDTSISVFTDQ--PSIVIFTANFGDLGTLYHEKKQVHHGGITFECQ 305 (340)
T ss_dssp CCHHHHHHTSCEEEEEESSCB-TTSCCEEEEE--TTEEEEEEESS--SEEEEECCCCTTCCCEETTEECCTTCCEECEEE
T ss_pred CHHHHCCCCCCCCCEEECCCC-CCCCEEEEEC--CCCCEEEEECC--CEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf 133412567888745625678-8742369943--99758999689--989998377677655578876788788999647
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCEEEEEE--EEEEEE
Q ss_conf 4788878888777636758978997699999--999986
Q T0524 286 TWVTNAVNLDLPSSLTGLQVLEPGEETTAKS--SITIEL 322 (325)
Q Consensus 286 t~~~da~n~~~~~~~~g~~~L~PGe~~~~~~--~i~ie~ 322 (325)
.+|||+|++.+.+ ++|+|||+++.++ +|+++.
T Consensus 306 -~~Pda~N~~~f~~----~~L~pge~y~~~t~Y~Fs~~~ 339 (340)
T d1nsza_ 306 -VSPGSEQIPELGD----ISLKAGEKYQATTIYSLHTKL 339 (340)
T ss_dssp -SCTTTTTCGGGCC----CEECTTCEEEEEEEEEEEECC
T ss_pred -CCCCCCCCCCCCC----EEECCCCEEEEEEEEEEEEEE
T ss_conf -8998657778998----289998999889999999982
No 4
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=0 Score=291.48 Aligned_cols=290 Identities=21% Similarity=0.275 Sum_probs=221.4
Q ss_pred EEEEEEECCCEEEEEECCCCCEEEEEEEC---CCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEECCCEEEECCEEEEE
Q ss_conf 15999987973999992138499999989---997439966899588638873245000665404219879879979994
Q T0524 13 TPAIKAGNEHLEMIVVPEWGSNVISLVDK---TTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYHF 89 (325)
Q Consensus 13 ~~~i~L~n~~l~~~i~p~~Ga~i~s~~~~---~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~~~Ri~~g~f~~~G~~~~l 89 (325)
+..++|+|+++++.|++ +||.|.+|+.+ |...+++..++..+.+..++.++|+.++|++|||++|.|.++|+.|+|
T Consensus 21 v~~~tl~n~~l~v~i~~-~GA~i~~l~~~d~~G~~~~vvlg~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~~y~l 99 (344)
T d1so0a_ 21 VEKFQLQSDLLRVDIIS-WGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHL 99 (344)
T ss_dssp EEEEEEECSSCEEEEET-BTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTTCEECSBCSEEGGGEEEETTEEEEC
T ss_pred EEEEEEECCCEEEEEEC-CCCEEEEEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCEEECCCCEEECCEEEECCEEEEE
T ss_conf 99999986999999978-69099999988889978664968999899840788668784047880069979989999972
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCE
Q ss_conf 46898665556876566216999821367824999999845788500469844999999997589089999998477861
Q T0524 90 DINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKHATVMNKGKEA 169 (325)
Q Consensus 90 ~~~~~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i~~~v~N~g~~~ 169 (325)
++|++...++.|+..+...|+..... .... .+.+. +++...+||++++++++|+|.++.+.++ ++|.++++
T Consensus 100 ~~n~~~~~~hg~~~~~~~~~~~~~~~--~~~v--~~~~~---~~~~~~gfPg~~~~~vty~l~~~~~~~~--~~~~s~~~ 170 (344)
T d1so0a_ 100 AINKEPNSLHGGVRGFDKVLWTPRVL--SNGV--QFSRI---SPDGEEGYPGELKVWVTYTLDGGELIVN--YRAQASQA 170 (344)
T ss_dssp CCSBTTBEETTSSSCGGGSBCEEEEE--TTEE--EEEEE---ECTTGGGCCSCEEEEEEEEEETTEEEEE--EEEEESSC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEECC--EEEE--EEEEE---ECCCCCCCCCEEEEEEEEEECCCCEEEE--EECCCCCC
T ss_conf 46778765324789744578774023--0069--99999---5676689660478999999158832678--83155766
Q ss_pred EEEEHHHCCEEEECC------CCEEEEECCCCEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCC-------CCCEEEEE
Q ss_conf 553100145365079------9719998477078876765788741357-873434466105733-------24604788
Q T0524 170 FPWGIGYHTTFIFPA------ESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLRHK-------QLDDVFLS 235 (325)
Q Consensus 170 ~p~~~~~H~yf~~~~------~~~~l~~~~~~~~~~d~~~~pt~~~~~~-~~~~~~~~~~~~~~~-------~~d~~~~~ 235 (325)
+|+++++|+||+++. +++.|.+++..++++|+..+||+...+. ...++++....+... ..++.+ .
T Consensus 171 tp~~lt~H~yfnl~~~~~~~i~~~~L~i~a~~~l~~d~~~iPtg~~~~~~~~~~df~~~~~i~~~~~~~~~~~~~~~~-~ 249 (344)
T d1so0a_ 171 TPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNF-C 249 (344)
T ss_dssp EECBCEECCCBCTTCTTCSCCTTCEEEECEEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHHHTCCCCEEEE-E
T ss_pred CCCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEE-E
T ss_conf 410000443231056655301121688425708988875675775234668841024741012001210244000015-6
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC--------------CCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 2478887627999968997599999859977599964886--------------78839993254788878888777636
Q T0524 236 SYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG--------------KQGYLCPEPYTWVTNAVNLDLPSSLT 301 (325)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~--------------~~~~vciEP~t~~~da~n~~~~~~~~ 301 (325)
..........+.+.++.++++|++..+ ++++++||+.. ....||||||+ +|||+|++.+.
T Consensus 250 ~~~~~~~~~~a~l~~~~s~~~l~v~t~--~p~~~vYT~~~~~~~~~~~~g~~~~~~~giclEpq~-~pdA~N~~~~~--- 323 (344)
T d1so0a_ 250 LKGSKEKHFCARVHHAASGRVLEVYTT--QPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQN-WPDAVNQPRFP--- 323 (344)
T ss_dssp ECCSSSCEEEEEEEETTTTEEEEEEES--SSEEEEECCTTCCSCCBCGGGCBCCTTSCBEEEEES-CTTGGGCTTSC---
T ss_pred ECCCCCCCCEEEEECCCCCEEEEECCC--CCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCCCCCC---
T ss_conf 527777631179990899818997699--988999889877864437788465887899996888-98765788999---
Q ss_pred CCEEECCCCEEEEEEEEEE
Q ss_conf 7589789976999999999
Q T0524 302 GLQVLEPGEETTAKSSITI 320 (325)
Q Consensus 302 g~~~L~PGe~~~~~~~i~i 320 (325)
.++|+|||+++.+.++++
T Consensus 324 -~~iL~pge~y~~~t~y~F 341 (344)
T d1so0a_ 324 -PVLLRPGEEYDHTTWFKF 341 (344)
T ss_dssp -CCEECTTCCEEEEEEEEE
T ss_pred -CEEECCCCEEEEEEEEEE
T ss_conf -869999898989999999
No 5
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]}
Probab=100.00 E-value=5.6e-45 Score=270.28 Aligned_cols=250 Identities=14% Similarity=0.126 Sum_probs=185.5
Q ss_pred CCCCEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCC-CCEECCCE
Q ss_conf 97305786519815999987973999992138499999989997439966899588638873245000665-40421987
Q T0524 1 MANFIEKITYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGT 79 (325)
Q Consensus 1 ~~~~~~~~~~~G~~~i~L~n~~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~~~~~~~~~~~~~~~G~p~~~~-~~Ri~~g~ 79 (325)
||.-++..+.+|+++|+|+|+.++|+|.. +||+|+||+.+..+.|+||+++.+.+...+++++|+|+||| +|+
T Consensus 9 ~~~~~~~~~~~~l~~i~i~~~~~~a~i~~-~Ga~l~s~~~~~~~~e~Lw~s~~a~~~~~~~IRGGiPi~fP~fG~----- 82 (269)
T d1jova_ 9 LTPELHLVQHNDIPVLHLKHAVGTAKISL-QGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGG----- 82 (269)
T ss_dssp EETTEEEEEETTEEEEEEEETTEEEEEET-BTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGG-----
T ss_pred CCCEEEEECCCCCCEEEEECCCEEEEEEC-CCCEEEEEEECCCCCEEEEECCHHHCCCCCCCCCCCCEECCCCCC-----
T ss_conf 58807851319954899948988999989-998999999799991489838745436778634886030766599-----
Q ss_pred EEECCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEE
Q ss_conf 98799799944689866555687656621699982136782499999984578850046984499999999758908999
Q T0524 80 FSFRGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKH 159 (325)
Q Consensus 80 f~~~G~~~~l~~~~~~~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~t~~L~~~~L~i~ 159 (325)
.++++|||+|++.|++++++.+.....+++.+ ..|||.|+++++|+|+ ++
T Consensus 83 ----------------~~~p~HGFAR~~~w~l~~~~~~~~~~~l~~~l---------~~~~~~f~~~~~~~lt-----l~ 132 (269)
T d1jova_ 83 ----------------VKQPAHGTARIRLWQLSHYYISVHKVRLEFEL---------FSDLNIIEAKVSMVFT-----DK 132 (269)
T ss_dssp ----------------GSSSTTBSGGGSBCEEEEEEEETTEEEEEEEE---------ECTTSCEEEEEEEEES-----SS
T ss_pred ----------------CCCCCCCCCCCCCEEEEEEECCCCEEEEEEEE---------CCCCCCCEEEEEEEEC-----CE
T ss_conf ----------------99998852136640898770677508999973---------1687721199999933-----17
Q ss_pred EEEEECCCCEEEEEHHHCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 99984778615531001453650799719998477078876765788741357873434466105733246047882478
Q T0524 160 ATVMNKGKEAFPWGIGYHTTFIFPAESSLFSLTADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQK 239 (325)
Q Consensus 160 ~~v~N~g~~~~p~~~~~H~yf~~~~~~~~l~~~~~~~~~~d~~~~pt~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 239 (325)
++++|++..+|||++|+||||++++............. .++. ....... .........+|.+|...
T Consensus 133 ~~l~n~~~~~~pf~~g~HpyF~v~d~~~~~v~gl~~~~-~~~~---~~~~~~~-------~~~~~~~~~~D~i~~~~--- 198 (269)
T d1jova_ 133 CHLTFTHYGEESAQAALHTYFNIGDINQVEVQGLPETC-FNSL---NQQQENV-------PSPRHISENVDCIYSAE--- 198 (269)
T ss_dssp EEEEEEECCSSCEEEEECCEEECSCGGGEEEESCCSEE-EETT---TTEEEEC-------CSSBCCSSCEEEEEECS---
T ss_pred EEEEECCCCCCCCEECCCCEEECCCCCCEEEECCCCCC-CCCC---CCCCCCC-------CCCCCCCCCEEEEECCC---
T ss_conf 99998469974320203613742882215996687633-0100---0433005-------88724674744996079---
Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCC----------CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 887627999968997599999859977599964886----------7883999325478887888877763675897899
Q T0524 240 RGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG----------KQGYLCPEPYTWVTNAVNLDLPSSLTGLQVLEPG 309 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~----------~~~~vciEP~t~~~da~n~~~~~~~~g~~~L~PG 309 (325)
...+.+.++..++++.+..+ .+++++||||+. +++||||||+.+ ..+|+||
T Consensus 199 ---~~~~~i~d~~~~~~i~v~~~-g~~~~vVWnP~~~~a~~~~d~~~~~fvCVEp~~~---------------~~~L~PG 259 (269)
T d1jova_ 199 ---NMQNQILDKSFNRTIALHHH-NASQFVLWNPWHKKTSGMSETGYQKMLCLETARI---------------HHLLEFG 259 (269)
T ss_dssp ---SSEEEEEETTTTEEEEEEEE-SCSEEEEEECTTSCCTTCCTTGGGGEEEEEEEEE---------------EEEECTT
T ss_pred ---CCCEEEEECCCCCEEEEEEE-CCCCEEEECCCCCHHCCCCCCCCCCEEEECCCCC---------------CCEECCC
T ss_conf ---98689996899988999981-8984899898500001064468878899791667---------------7667899
Q ss_pred CEEEEEEEEE
Q ss_conf 7699999999
Q T0524 310 EETTAKSSIT 319 (325)
Q Consensus 310 e~~~~~~~i~ 319 (325)
|+++.+++|+
T Consensus 260 es~~~~~~ir 269 (269)
T d1jova_ 260 ESLSVEISLK 269 (269)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEEC
T ss_conf 8199999979
No 6
>d1k1xa2 b.30.5.8 (A:385-659) 4-alpha-glucanotransferase, C-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=95.46 E-value=0.058 Score=26.86 Aligned_cols=159 Identities=18% Similarity=0.214 Sum_probs=80.9
Q ss_pred CCCEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEC-CCCHHHHCCCCCCC--------CC------
Q ss_conf 7305786519815999987973999992138499999989997439966-89958863887324--------50------
Q T0524 2 ANFIEKITYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLRE-PETAESFHDTPTLY--------GI------ 66 (325)
Q Consensus 2 ~~~~~~~~~~G~~~i~L~n~~l~~~i~p~~Ga~i~s~~~~~~~~~~l~~-~~~~~~~~~~~~~~--------G~------ 66 (325)
++-+....|+|.+=|.|+|+.+.+.+.|..||.|++|..+.....++-. ....+.|....... |+
T Consensus 3 ~~~~~DfD~DG~~Ev~l~~~~~~~~~~p~~GG~l~Eld~k~~~~Nl~dTL~Rr~E~YH~~~~~~~~~~~~~egi~siHe~ 82 (275)
T d1k1xa2 3 ENKILDVDFDGRAEIMVENDGFIATIKPHYGGSIFELSSKRKAVNYNDVLPRRWEHYHEVPEATKPEKESEEGIASIHEL 82 (275)
T ss_dssp CCEEECSSSSSSCEEEEECSSEEEEEETTTTTEEEEEEETTTTEETTCCCCCCCCTTCC---------------------
T ss_pred CCCEECCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 64011567899611799768689999107798799981255334556742035312113442388633576676678895
Q ss_pred ---------CCCCCCCEECCCEEEECCEEEEECCCCCC-----CCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCC
Q ss_conf ---------00665404219879879979994468986-----6555687656621699982136782499999984578
Q T0524 67 ---------PILFPPNRISDGTFSFRGRTYHFDINEKD-----KHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSEL 132 (325)
Q Consensus 67 ---------p~~~~~~Ri~~g~f~~~G~~~~l~~~~~~-----~~~~~HG~~~~~~w~v~~~~~~~~~~~~~~~~~~~~~ 132 (325)
-.+.| ..-+... +.. |-+++.... ....-.|--.+.++++.... +..++...-...
T Consensus 83 ~~~k~e~l~~~L~y-D~~~R~s--~iD--Hf~~~~~tle~~~~~~~~E~gDF~~~~y~~~~~~---~~v~l~r~G~v~-- 152 (275)
T d1k1xa2 83 GKQIPEEIRRELAY-DWQLRAI--LQD--HFIKPEETLDNYRLVKYHELGDFVNQPYEYEMIE---NGVKLWREGGVY-- 152 (275)
T ss_dssp --CCCHHHHTTCCC-CSSCCCE--EEE--EEECTTCCHHHHHTTCSCCCBSCSSSCCEEEEET---TEEEEEEEEEEE--
T ss_pred HCCCCCCHHHHCCC-CCCCCCE--EEE--EECCCCCCHHHHHCCCCCCCCCCCCCCEEEEECC---CCEEEEEECCCC--
T ss_conf 01233002644366-6535754--588--7237887888875478300156557735744226---738999978631--
Q ss_pred CCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCEEEEEH
Q ss_conf 850046984499999999758908999999847786155310
Q T0524 133 PHVQKQFPHHAVVRMTYTIKENTLFKHATVMNKGKEAFPWGI 174 (325)
Q Consensus 133 ~~~~~~~P~~~~~~~t~~L~~~~L~i~~~v~N~g~~~~p~~~ 174 (325)
..-..+++++..|+|..+++.+.|++.+.++.+.-|++
T Consensus 153 ----~~~~~p~~l~K~~~l~~~~~~v~y~~~~e~~~~~~f~v 190 (275)
T d1k1xa2 153 ----AEEKIPARVEKKIELTEDGFIAKYRVLLEKPYKALFGV 190 (275)
T ss_dssp ----SSSEEEEEEEEEEEEETTEEEEEEEEEESSCCCEEEEE
T ss_pred ----CCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCEEEEE
T ss_conf ----35635659999999817826999999348984312899
No 7
>d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]}
Probab=88.30 E-value=0.55 Score=21.32 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=22.9
Q ss_pred EEECCCEEEEEEEEEECCCCEEEEEHHHCCEEE
Q ss_conf 997589089999998477861553100145365
Q T0524 149 YTIKENTLFKHATVMNKGKEAFPWGIGYHTTFI 181 (325)
Q Consensus 149 ~~L~~~~L~i~~~v~N~g~~~~p~~~~~H~yf~ 181 (325)
+.|....-.++++|+|+||+|..+ |.|.-|.
T Consensus 15 I~lN~gr~~~~l~V~NtGDRpIQV--GSH~HF~ 45 (122)
T d4ubpb_ 15 IEINAGREKTTIRVSNTGDRPIQV--GSHIHFV 45 (122)
T ss_dssp EETTTTSCEEEEEEEECSSSCEEE--ETTSCGG
T ss_pred EEECCCCCEEEEEEEECCCCCEEE--CCCCCHH
T ss_conf 886599977899987479863255--2635736
No 8
>d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]} SCOP: d1e9ya1 d1ejxb_
Probab=82.87 E-value=1.1 Score=19.58 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=23.0
Q ss_pred EEEECCCEEEEEEEEEECCCCEEEEEHHHCCEEE
Q ss_conf 9997589089999998477861553100145365
Q T0524 148 TYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFI 181 (325)
Q Consensus 148 t~~L~~~~L~i~~~v~N~g~~~~p~~~~~H~yf~ 181 (325)
.+.|....=.++++|+|+||+|. +.|.|.-|.
T Consensus 14 ~I~lN~gr~~~~l~V~NtGDRpI--QVGSHyHF~ 45 (122)
T d4ubpb_ 14 EIEINAGREKTTIRVSNTGDRPI--QVGSHIHFV 45 (122)
T ss_dssp EEETTTTSCEEEEEEEECSSSCE--EEETTSCGG
T ss_pred CEEECCCCCEEEEEEEECCCCCE--EECCEECHH
T ss_conf 67866999668998864688532--325310578
No 9
>d1e9ya1 b.85.3.1 (A:106-238) Urease, beta-subunit {Helicobacter pylori [TaxId: 210]}
Probab=82.36 E-value=0.85 Score=20.24 Aligned_cols=32 Identities=31% Similarity=0.382 Sum_probs=22.8
Q ss_pred EEEECCCEEEEEEEEEECCCCEEEEEHHHCCEEE
Q ss_conf 9997589089999998477861553100145365
Q T0524 148 TYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFI 181 (325)
Q Consensus 148 t~~L~~~~L~i~~~v~N~g~~~~p~~~~~H~yf~ 181 (325)
.+.|....-.++++|+|+|++|.. .|.|.-|.
T Consensus 12 ~I~lN~gr~~~~l~V~NtGDRpIQ--VGSH~HF~ 43 (133)
T d1e9ya1 12 DITINEGKKAVSVKVKNVGDRPVQ--IGSHFHFF 43 (133)
T ss_dssp EEETTTTCCCCEEEEEECSSSCEE--EETTSCGG
T ss_pred CEEECCCCCEEEEEEEECCCCCEE--ECCCCCHH
T ss_conf 688669996799998737886325--52635746
No 10
>d1ejxb_ b.85.3.1 (B:) Urease, beta-subunit {Klebsiella aerogenes [TaxId: 28451]}
Probab=78.69 E-value=1.6 Score=18.75 Aligned_cols=31 Identities=19% Similarity=0.327 Sum_probs=23.1
Q ss_pred EEECCCEEEEEEEEEECCCCEEEEEHHHCCEEE
Q ss_conf 997589089999998477861553100145365
Q T0524 149 YTIKENTLFKHATVMNKGKEAFPWGIGYHTTFI 181 (325)
Q Consensus 149 ~~L~~~~L~i~~~v~N~g~~~~p~~~~~H~yf~ 181 (325)
+.|..+.-.++++|+|+||+|.. .|.|.-|.
T Consensus 13 I~lN~gr~~~~l~V~NtGDRpIQ--VGSH~HF~ 43 (101)
T d1ejxb_ 13 IALNTGRATCRVVVENHGDRPIQ--VGSHYHFA 43 (101)
T ss_dssp EECSTTCCEEEEEEEECSSSCEE--EETTSCGG
T ss_pred EEECCCCCEEEEEEEECCCCCEE--ECCCCCHH
T ss_conf 88769996799998747886236--61624757
No 11
>d1v7wa2 b.30.5.3 (A:1-270) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]}
Probab=69.91 E-value=2.6 Score=17.46 Aligned_cols=33 Identities=9% Similarity=-0.055 Sum_probs=21.7
Q ss_pred EEEEEEEEECCCEEEEEEEEEECCCCEEEEEHH
Q ss_conf 999999997589089999998477861553100
Q T0524 143 AVVRMTYTIKENTLFKHATVMNKGKEAFPWGIG 175 (325)
Q Consensus 143 ~~~~~t~~L~~~~L~i~~~v~N~g~~~~p~~~~ 175 (325)
.++++.+..+++.=-..++++|.++++--+++.
T Consensus 118 ~e~t~fVp~~d~vEv~~l~l~N~s~~~R~Lsvt 150 (270)
T d1v7wa2 118 ARKTLFVPKGEDAEIWDVVIKNTSDQVRTISAF 150 (270)
T ss_dssp EEEEEECCTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEEEECCCCCEEEEEE
T ss_conf 999999827998899999999799992799999
No 12
>d1so9a_ b.146.1.1 (A:) Cytochrome C oxidase assembly protein CtaG {Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]}
Probab=20.74 E-value=14 Score=13.34 Aligned_cols=35 Identities=14% Similarity=0.026 Sum_probs=21.3
Q ss_pred CCCEEEEE---EEEEEECCCEEEEEEEEEECCCCEEEEE
Q ss_conf 69844999---9999975890899999984778615531
Q T0524 138 QFPHHAVV---RMTYTIKENTLFKHATVMNKGKEAFPWG 173 (325)
Q Consensus 138 ~~P~~~~~---~~t~~L~~~~L~i~~~v~N~g~~~~p~~ 173 (325)
+.|+.|.- .+++.. +..-.+.+.++|.+++++.-.
T Consensus 24 ~lpW~F~P~~~~i~V~p-Ge~~~v~y~a~N~s~~~~~g~ 61 (131)
T d1so9a_ 24 GLPWEFVPVQRDIDVRI-GETVQIMYRAKNLASTPTTGQ 61 (131)
T ss_dssp TSCEEEECSCSEEEECT-TCCCCEEEEEEECSSSCEECC
T ss_pred CCCEEEEECCEEEEEEC-CCEEEEEEEEECCCCCCEEEE
T ss_conf 98479993653899937-973999999999999839999
No 13
>d1s58a_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Human parvovirus B19 [TaxId: 10798]}
Probab=20.46 E-value=13 Score=13.53 Aligned_cols=16 Identities=25% Similarity=0.190 Sum_probs=7.3
Q ss_pred EEECCCCCEEEEEEEC
Q ss_conf 9992138499999989
Q T0524 26 IVVPEWGSNVISLVDK 41 (325)
Q Consensus 26 ~i~p~~Ga~i~s~~~~ 41 (325)
+|..++=|.|.=+.+.
T Consensus 122 t~~NdLTatv~Vf~D~ 137 (536)
T d1s58a_ 122 QVTDSATGRLCMLVDH 137 (536)
T ss_dssp EECCCSSCCBCBEECS
T ss_pred EEECCCCEEEEEEECC
T ss_conf 8715764078999768
No 14
>d1lp3a_ b.121.5.2 (A:) Dependovirus capsid protein {Adeno-associated virus, aav-2 [TaxId: 272636]}
Probab=20.17 E-value=20 Score=12.46 Aligned_cols=25 Identities=8% Similarity=-0.075 Sum_probs=11.9
Q ss_pred CCCCEEEEECCCCCCCEEEEECCCCC
Q ss_conf 99775999648867883999325478
Q T0524 263 EQFKHWVVYNADGKQGYLCPEPYTWV 288 (325)
Q Consensus 263 ~~~~~~~v~~~~~~~~~vciEP~t~~ 288 (325)
+.++.|.+=+|++ +=||=+=|+-+.
T Consensus 416 p~~Gg~gm~~PPp-qIFIK~~PvP~n 440 (519)
T d1lp3a_ 416 PLMGGFGLKHPPP-QILIKNTPVPAN 440 (519)
T ss_dssp CTTSSEEESSCSC-CEEEEECCCBCC
T ss_pred CCCCCCCCCCCCC-EEEEECCCCCCC
T ss_conf 7777641579997-689864666889
Done!