Query T0526 NP_417039.1, Escherichia coli k12, 290 residues
Match_columns 290
No_of_seqs 130 out of 2009
Neff 9.3
Searched_HMMs 22458
Date Fri May 21 18:05:31 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/hhm/T0526.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/hhm/T0526.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k25_A SLR1438 protein; struct 100.0 0 0 325.0 29.5 261 1-289 12-288 (289)
2 3dcd_A Galactose mutarotase re 100.0 0 0 323.7 30.1 270 3-289 2-293 (307)
3 3imh_A Galactose-1-epimerase; 100.0 1.4E-45 0 304.6 27.9 278 2-289 19-331 (338)
4 1yga_A Hypothetical 37.9 kDa p 100.0 1.4E-45 0 302.3 28.7 285 1-288 10-341 (342)
5 1z45_A GAL10 bifunctional prot 100.0 1.1E-44 0 297.8 31.1 282 1-287 373-698 (699)
6 1nsx_A Galactose mutarotase; e 100.0 2.7E-44 0 295.4 28.9 279 2-289 13-338 (347)
7 1lur_A Aldose 1-epimerase; vit 100.0 5.6E-44 0 293.3 30.4 281 3-290 14-338 (339)
8 2cir_A Hexose-6-phosphate muta 100.0 4.2E-44 0 294.1 16.9 254 4-289 13-290 (297)
9 1snz_A Aldose 1-epimerase; mut 100.0 1.2E-41 0 278.8 27.0 281 2-288 22-342 (344)
10 2hta_A Putative enzyme related 100.0 5.1E-41 2.8E-45 274.7 21.4 247 1-289 41-308 (309)
11 1jov_A HI1317; hypothetical pr 100.0 3.1E-38 1.4E-42 257.2 21.9 237 1-286 21-269 (270)
12 3bs6_A Inner membrane protein 97.0 0.016 7E-07 32.7 13.8 126 2-145 4-137 (280)
13 3blc_A Inner membrane protein 96.0 0.062 2.8E-06 28.9 16.1 125 3-145 36-168 (330)
14 3mi6_A Alpha-galactosidase; NE 81.9 1.9 8.3E-05 19.6 15.0 58 98-155 129-188 (745)
15 1ejx_B Urease beta subunit; al 81.2 2 8.8E-05 19.5 6.4 31 119-151 12-42 (101)
16 4ubp_B Protein (urease (chain 77.3 2.6 0.00012 18.7 6.1 30 120-151 19-48 (126)
17 1yew_A Particulate methane mon 72.4 3.5 0.00015 17.9 4.8 26 117-142 256-281 (382)
18 1e9y_A Urease alpha subunit; h 67.8 4.3 0.00019 17.3 5.0 31 119-151 117-147 (238)
19 2x41_A Beta-glucosidase; hydro 64.5 5 0.00022 16.9 3.6 19 272-290 661-679 (721)
20 3isy_A Bsupi, intracellular pr 63.6 5.2 0.00023 16.8 6.0 34 113-146 6-39 (120)
21 2cqs_A Cellobiose phosphorylas 46.0 10 0.00045 15.0 11.8 49 95-147 118-168 (842)
22 3chx_A PMOB; membrane protein, 39.4 3.6 0.00016 17.8 -0.6 24 119-142 264-287 (392)
23 1v7w_A Chitobiose phosphorylas 32.1 17 0.00075 13.6 11.8 48 97-148 103-152 (807)
24 1nkg_A Rhamnogalacturonase B; 31.1 17 0.00077 13.5 4.6 34 3-36 10-46 (508)
25 2kl8_A OR15; structural genomi 26.2 21 0.00094 13.0 3.0 16 116-131 31-46 (85)
26 1k1x_A 4-alpha-glucanotransfer 25.3 22 0.00098 12.9 16.4 58 87-145 514-574 (659)
27 1yyc_A LEA protein, putative l 20.2 28 0.0012 12.3 1.5 26 119-144 56-81 (174)
No 1
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=0 Score=324.99 Aligned_cols=261 Identities=18% Similarity=0.323 Sum_probs=208.3
Q ss_pred CEEEEEECC--CEEEEEEC-CCCEEEEEEECCEEEEECCCCCCH----HHCCCCCEEEEEEEECCCCEEEECCEEEEECC
Q ss_conf 938998769--84999917-896999999799608935898002----10566738854433302986887997999554
Q T0526 1 MTIYTLSHG--SLKLDVSD-QGGVIEGFWRDTTPLLRPGKKSGV----ATDASCFPLVPFANRVSGNRFVWQGREYQLQP 73 (290)
Q Consensus 1 m~~~~L~~~--~~~~~i~~-~Ga~i~s~~~~g~~~l~~~~~~~~----~~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~ 73 (290)
|+ +.|+|+ .++++|.| +||.|+||+.+|+|+||..+.... ..++|+|+||||+||+++|+|.++|+.|+++
T Consensus 12 ~t-~~l~~~~~~~~v~v~P~~Ga~i~s~~~~g~e~L~~~~~~~~~~~~~~~gG~p~lfP~~gRi~~g~~~~~g~~~~l~- 89 (289)
T 3k25_A 12 LT-YHLEDDQSLARLSLVPGRGGLVTEWTVQGQPILYFDRERFQDPSLSVRGGIPILFPICGNLPQDQFNHAGKSYRLK- 89 (289)
T ss_dssp CE-EEEEETTTTEEEEEEGGGTSEEEEEEETTEECBCBCTTGGGSTTSCCCBSBCEEBSCSSCCGGGEEEETTEEEECC-
T ss_pred EE-EEEECCCCCEEEEECCCCCCEEEEEEECCEEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCEEEECC-
T ss_conf 89-9999289828999872379899999989999985593786267775378881888784805899484899796257-
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCC---EEEEEECC-----CCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEE
Q ss_conf 47886677877433534799981698---89999754-----78885659999999849906999999835895069862
Q T0526 74 NVEWDAHYLHGDGWLGEWQCVSHSDD---SLCLVYEH-----RSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGT 145 (290)
Q Consensus 74 n~~~~~~~~HG~ar~~~w~v~~~~~~---~~~l~~~~-----~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~ 145 (290)
+||++|..+|++.+...+ .+++.+.. ..|||+|+++++|+|.+++|+++++++|+|+++|||++
T Consensus 90 --------~HG~~~~~~w~~~~~~~~~~~~~~~~l~~~~~~~~~~P~~~~~~~~y~L~~~~L~~~~~v~N~~~~~~p~~~ 161 (289)
T 3k25_A 90 --------QHGFARDLPWEVIGQQTQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQGHSLRIEQRIANLGDQRMPFSL 161 (289)
T ss_dssp --------TTBSGGGSCCEEEEEECSSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEETTEEEEEEEEEECSSSCEEECC
T ss_pred --------CCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCEEEEE
T ss_conf --------785515775167786317882689999647230024998569999999927726999999827997779997
Q ss_pred CCCCEEECCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCCC-CCEEEEEECCCCCEEEEE
Q ss_conf 3541482189866999146146865665567632678862325476460611113000689-954999978999589999
Q T0526 146 GWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGW-NGQARIEQPQEGYAIIME 224 (290)
Q Consensus 146 g~HpyF~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~~~~~-~~~~~l~~~~~~~~i~i~ 224 (290)
|+||||++++..++++........+... .....+.....+....+|+++... +....+.++..+.++.++
T Consensus 162 g~HpyF~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (289)
T 3k25_A 162 GFHPYFFCREKLGITLAIPANDYLDQKT---------GDCHGYDGQLNLTSPELDLAFTQISQPRAHFIDPDRNLKIEVS 232 (289)
T ss_dssp EECCEEECSCCTTCEEECSCSEEEETTT---------CCEEECCSCCCTTSSEEEEEECCCSSSEEEEEETTTTEEEEEE
T ss_pred EECCEECCCCCEEEEEEECCCCEECCCC---------CCCCCCCCCEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 8275472587304899745752022455---------8743557740105654410343068982278816898189999
Q ss_pred ECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEE
Q ss_conf 85999889998089888766567749991056788888788888617978998399999999985
Q T0526 225 TTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEW 289 (290)
Q Consensus 225 ~~~~~~~~~v~~~~~~~~~~~~~~~vciEP~~~~~da~n~~~~~~~~~L~PGe~~~~~~~i~ve~ 289 (290)
.+..++++++|++. .++|||||||+|++||+|.. .++++|+|||+++..++|+|.+
T Consensus 233 ~~~~~~~~~vwtp~-------~~~~vciEP~t~~~da~n~~--~~l~~L~PGe~~~~~~~~~v~~ 288 (289)
T 3k25_A 233 FSELYQTLVLWTVA-------GKDYLCLEPWSGPRNALNSG--EQLAWVEPYSSRSAWVNFQVST 288 (289)
T ss_dssp ECTTCCEEEEEEES-------SSCEEEEEEESSCTTHHHHC--TTCEEECTTEEEEEEEEEEEEC
T ss_pred ECCCCCEEEEECCC-------CCCEEEEECCCCCCCCCCCC--CCCEEECCCCEEEEEEEEEEEE
T ss_conf 88999879992789-------99899993748899855489--9988989999199999999997
No 2
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=0 Score=323.67 Aligned_cols=270 Identities=17% Similarity=0.289 Sum_probs=208.6
Q ss_pred EEEEECCCEEEEEECCCCEEEEEEE--CCEEEEECCCCCCHHHCCCCCEEEEEEEECCCCEEEECCEEEEECCCCCCCCC
Q ss_conf 8998769849999178969999997--99608935898002105667388544333029868879979995544788667
Q T0526 3 IYTLSHGSLKLDVSDQGGVIEGFWR--DTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAH 80 (290)
Q Consensus 3 ~~~L~~~~~~~~i~~~Ga~i~s~~~--~g~~~l~~~~~~~~~~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~n~~~~~~ 80 (290)
.+||+|+.++|+|+++||.|+||+. .|+|+||+.++ .+..++.|+||||+||+++|+|.++|+.|+|+
T Consensus 2 ~~tleN~~l~v~v~~~Ga~l~s~~~~~~~~e~L~~~~~--~~~~~~~p~l~P~~gRi~~g~~~~~g~~~~l~-------- 71 (307)
T 3dcd_A 2 DYTIENNMIKVVISDHGAEIQSVKSAHTDEEFMWQANP--EIWGRHAPVLFPIVGRLKNDEYTYKGKTYHLG-------- 71 (307)
T ss_dssp EEEEECSSEEEEEETBTTEEEEEEETTTCCBCBCCCCT--TTCCCSSCEEBSCSSCCGGGEEEETTEEEECC--------
T ss_pred EEEEECCCEEEEEECCCCEEEEEEECCCCEEEEECCCH--HHHCCCCCEEEEECCCCCCCEEEECCCEEEEC--------
T ss_conf 89999699999997569799999979999688973886--88378996899882641899076779798566--------
Q ss_pred CCCCCCCCCEEEEEEECCCEEEEEECC-----CCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEECCCCEEECCC
Q ss_conf 787743353479998169889999754-----788856599999998499069999998358950698623541482189
Q T0526 81 YLHGDGWLGEWQCVSHSDDSLCLVYEH-----RSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSP 155 (290)
Q Consensus 81 ~~HG~ar~~~w~v~~~~~~~~~l~~~~-----~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~g~HpyF~~~~ 155 (290)
+|||+|.++|++++.++++++|++.. ++|||+|+++++|+|++++|+++++++|.|+++|||++|+||||++++
T Consensus 72 -~HG~~~~~~w~v~~~~~~~~~l~l~~~~~~~~~~P~~~~l~~~~~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~l~~ 150 (307)
T 3dcd_A 72 -QHGFARNADFEVENHTKESITFLLKDNEETRKVYPFKFEFRVNYNLMNNLLEENFSVVNKSDETMIFGVGGHPGFNLPT 150 (307)
T ss_dssp -TTBSGGGSBCEEEEEETTEEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSSCEEECEEECCEEECCC
T ss_pred -CCCCCCCCCEEEEECCCCEEEEEECCCHHHHCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEECCEEEECCC
T ss_conf -6799578526999827981799970482462059987699999996256489999999388863788405240585586
Q ss_pred CCE-----EEECCCEEEEECCCCCCCC-CCCCCCCCCCCCCCEEECCCEECCC---C--CCCCCEEEEEECCCCCEEEEE
Q ss_conf 866-----9991461468656655676-3267886232547646061111300---0--689954999978999589999
Q T0526 156 QTR-----IQAQASGYWLEREQWLAGE-FCEQLPQELDFNQPAPLPRQWVNNG---F--AGWNGQARIEQPQEGYAIIME 224 (290)
Q Consensus 156 ~~~-----l~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~d~~---~--~~~~~~~~l~~~~~~~~i~i~ 224 (290)
... +.+............++++ .........+......+.+..+++. + .+.++.+.+..+..+.++.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~ 230 (307)
T 3dcd_A 151 DHGENKEDFYFDMHPSVTRVRIPLKDASLDWNNRSLAPTDSLIALSDDLFKDDALIYELRGNDNKVSLRTDKNKFHVNVW 230 (307)
T ss_dssp TTSCCGGGEEEEEESCCCEEECCEETTEECGGGCEEECTTSCEECCSGGGTTSCEEEECCSSCEEEEEEETTSSCEEEEE
T ss_pred CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEE
T ss_conf 55720003899814565212113687730356673056676044145432565499944898618999968998299998
Q ss_pred ECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCC----CCCCCEEECCCCEEEEEEEEEEEE
Q ss_conf 85999889998089888766567749991056788888788----888617978998399999999985
Q T0526 225 TTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRP----EGGDLIALAPGESTTSEMSLRVEW 289 (290)
Q Consensus 225 ~~~~~~~~~v~~~~~~~~~~~~~~~vciEP~~~~~da~n~~----~~~~~~~L~PGe~~~~~~~i~ve~ 289 (290)
. +.++++++|+..+. .++|||||||+|+|||+|.+ ++.++++|+|||+++.+++|++++
T Consensus 231 ~-~~~p~~~vwt~~~~-----~~~~vcvEP~t~~~da~n~~~~~~~~~g~~~L~pge~~~~~~~it~~~ 293 (307)
T 3dcd_A 231 T-RDAPFVGIWSQYPK-----TDNYVCIEPWWGIADRDDADGDLEHKYGMNHLKPGKEFQAGFSMTYHS 293 (307)
T ss_dssp E-ETCSEEEEECCSSS-----CCSEEEEEEEESCCCBTTCCSBGGGCTTCEEECTTCEEEEEEEEEEEC
T ss_pred E-CCCCEEEEECCCCC-----CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEC
T ss_conf 4-89997999899999-----998999914478998567732001277988989999999999999986
No 3
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein structure initiative; 1.76A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.4e-45 Score=304.62 Aligned_cols=278 Identities=15% Similarity=0.170 Sum_probs=222.6
Q ss_pred EEEEEECCC-EEEEEECCCCEEEEEEECCEEEEECCCCCCHH---HCCCCCEEEEEEEECCCCEEEECCEEEEECCCCCC
Q ss_conf 389987698-49999178969999997996089358980021---05667388544333029868879979995544788
Q T0526 2 TIYTLSHGS-LKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVA---TDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEW 77 (290)
Q Consensus 2 ~~~~L~~~~-~~~~i~~~Ga~i~s~~~~g~~~l~~~~~~~~~---~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~n~~~ 77 (290)
..|||+|+. ++|+|+++||.|++|+.++++++.+++....+ +.+.+.+|+||+|||++|+|.++|+.|+|++|++.
T Consensus 19 ~~itl~N~~g~~v~i~~~GA~i~~~~~~~~~vvlg~d~~~~y~~~~~~~Ga~~Gp~anRI~~g~f~~~G~~y~L~~Ne~~ 98 (338)
T 3imh_A 19 CEITLENDAGMAVKVLNYGATLEKVLLDGENMILSLNSPEDYSKERNFLGGTVGRIAGRVRAGQWKHGNEIHQLPLNDGD 98 (338)
T ss_dssp EEEEEECSSSEEEEEETBTTEEEEEEETTEECBCCCSSGGGGGTSCCCTTCEECSBCSEEGGGEEEETTEEEECCCCBTT
T ss_pred EEEEEECCCCCEEEEECCCCEEEEEEECCEEEEECCCCHHHHHHCCCCCCCCCCCCCCEEECCEEEECCEEEECCCCCCC
T ss_conf 99999969983999987591999999899128852899899842888468680675884558899889999966688997
Q ss_pred CCCCCCC---CCCCCEEE---EEEECCCEEEEEECC----CCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEECC
Q ss_conf 6677877---43353479---998169889999754----7888565999999984990699999983589506986235
Q T0526 78 DAHYLHG---DGWLGEWQ---CVSHSDDSLCLVYEH----RSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGW 147 (290)
Q Consensus 78 ~~~~~HG---~ar~~~w~---v~~~~~~~~~l~~~~----~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~g~ 147 (290)
. ++|| +.+. .|. +.+.+..+++|++.. .+||++++++++|+|+++. +++++++|.+++++|+++|+
T Consensus 99 ~--~~HGg~g~~~~-~~~~~~~~~~~~~~v~l~~~~~~g~~GyPg~~~~~vtY~L~~~~-~l~i~~~~~~~~~tp~~l~~ 174 (338)
T 3imh_A 99 N--HIHGGIGTDMH-VWDFRPSCDSEHARVDLTLFDPDGNNDYPGNLKLHARYELDNEN-NLHYLLEAVSDKLTIFNPVN 174 (338)
T ss_dssp B--EETTSSCGGGS-BCEEEEEECSSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTS-EEEEEEEEEESSSEECBCEE
T ss_pred C--CCCCCCCCCCC-CEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEECCC-EEEEEEEEECCCCCCEECCC
T ss_conf 6--65898556875-05788871477648999997488678998789999999991388-59999997147644102254
Q ss_pred CCEEECCC---CCEEEECCCEEEEECCCCCCCC-CCCCCCCCCCCCCCEEECCC------------EECCCCCCCCCEEE
Q ss_conf 41482189---8669991461468656655676-32678862325476460611------------11300068995499
Q T0526 148 HPYFPLSP---QTRIQAQASGYWLEREQWLAGE-FCEQLPQELDFNQPAPLPRQ------------WVNNGFAGWNGQAR 211 (290)
Q Consensus 148 HpyF~~~~---~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~------------~~d~~~~~~~~~~~ 211 (290)
||||++++ +++|++++..++..++..+|++ ...+.++.+||+.++.+++. .+|++|........
T Consensus 175 HpYFnL~~~~~d~~L~i~a~~~l~~D~~~iPtG~~~~~~~t~~DFr~~~~i~~~~~~~~~~~~~~~G~D~~fvl~~~~~~ 254 (338)
T 3imh_A 175 HTYFNLGERAEDLNLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGLDHPFILNGNNPA 254 (338)
T ss_dssp CCEECTTSCGGGCEEEECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHHTSCEEEEEECSCSCS
T ss_pred CCEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHCCCCCCCCCCEECCCCCCE
T ss_conf 47898887640015653356599847545657871136797331448622132231430111125688742674799748
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEECCCCCC-----CCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEE
Q ss_conf 9978999589999859998899980898887-----66567749991056788888788888617978998399999999
Q T0526 212 IEQPQEGYAIIMETTPPAPCYFIFVSDPAFD-----KGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLR 286 (290)
Q Consensus 212 l~~~~~~~~i~i~~~~~~~~~~v~~~~~~~~-----~~~~~~~vciEP~~~~~da~n~~~~~~~~~L~PGe~~~~~~~i~ 286 (290)
...+.++++++|+++. |++++|+++.... ....+..|||||| ++|||+|. ++ .++|+|||+++..++++
T Consensus 255 a~l~~~g~~l~v~td~--p~~qvYT~~~l~~~~~~~~~~~~~giclEpq-~~Pda~N~--~~-~ivL~pge~y~~~t~y~ 328 (338)
T 3imh_A 255 ALLSSNKHRLIVKTNA--PALVLYAGNHFNHTGIVNNIGQYDGITFEAQ-CPPAEGND--LG-QITLLPFEKFKRTVDWK 328 (338)
T ss_dssp EEEECSSEEEEEEESS--SEEEEECCTTCCSBTTBTTCCTTSCEECEEE-SCCCSSSC--CG-GGEECTTCCEEEEEEEE
T ss_pred EEEECCCCEEEEEECC--CEEEEECCCCCCCCCCCCCCCCCCEEEEECC-CCCCCCCC--CC-CEEECCCCEEEEEEEEE
T ss_conf 9996588289999789--9899988887787666788897078999443-79998665--89-81898999998999999
Q ss_pred EEE
Q ss_conf 985
Q T0526 287 VEW 289 (290)
Q Consensus 287 ve~ 289 (290)
+|+
T Consensus 329 F~~ 331 (338)
T 3imh_A 329 FEE 331 (338)
T ss_dssp EEE
T ss_pred EEC
T ss_conf 807
No 4
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-45 Score=302.27 Aligned_cols=285 Identities=14% Similarity=0.135 Sum_probs=226.8
Q ss_pred CEEEEEECC-CEEEEEECCCCEEEEEEECCEEEEECCCCCCHH---HCCCCCEEEEEEEECCCCEEEECCEEEEECCCCC
Q ss_conf 938998769-849999178969999997996089358980021---0566738854433302986887997999554478
Q T0526 1 MTIYTLSHG-SLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVA---TDASCFPLVPFANRVSGNRFVWQGREYQLQPNVE 76 (290)
Q Consensus 1 m~~~~L~~~-~~~~~i~~~Ga~i~s~~~~g~~~l~~~~~~~~~---~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~n~~ 76 (290)
+.+|||+|+ +++|+|.++||.|+||+.++++++++++....+ +.+.+++|+||+|||++|+|.++|+.|+|++|++
T Consensus 10 ~~~itl~n~~~~~~~i~~~GA~i~~l~~~~~~vvlg~~~~~~Y~~~~~~~Ga~iGr~ANRI~~g~f~~~G~~y~L~~Ne~ 89 (342)
T 1yga_A 10 YGVITIGDEKKFQATIAPLGATLVDLKVNGQSVVQGYSNVQDYLTDGNMMGATVGRYANRIAKGVFSLDDGPHKLTVNNC 89 (342)
T ss_dssp TCCEEEEETTTEEEEEETBTTEEEEEEETTEECBCCCSSGGGGTTCSSCTTCEECSBCSEEGGGEEEETTEEEECCCCBT
T ss_pred EEEEEEECCCCEEEEEECCCEEEEEEEECCEEEEECCCCHHHHHCCCCCCCCEECCCCCEEECCEEEECCEEEECCCCCC
T ss_conf 99999978996699998779099999999958894799989981189816528445557476889999999999267889
Q ss_pred CCCCCCCCCCC-CCEEEE---EEECCCEEEEEEC---------CCCCCCCEEEEEEEEEEC--CEEEEEEEEEECCCCCE
Q ss_conf 86677877433-534799---9816988999975---------478885659999999849--90699999983589506
Q T0526 77 WDAHYLHGDGW-LGEWQC---VSHSDDSLCLVYE---------HRSGVYHYRVSQAFHLTA--DTLTVTLSVTNQGAETL 141 (290)
Q Consensus 77 ~~~~~~HG~ar-~~~w~v---~~~~~~~~~l~~~---------~~~~P~~~~l~~~~~L~~--~~L~v~~~v~N~g~~~~ 141 (290)
+..++.|+..+ .+.|++ .+.+.+.+.+++. .++||++++++++|+|.+ .+|+++++++|.+++++
T Consensus 90 ~~~lhgg~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~GfPg~~~~~v~y~L~~~~~~L~i~~~~~n~~~~~t 169 (342)
T 1yga_A 90 GNTNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDMEYQAQLVRGDAT 169 (342)
T ss_dssp TBEETTGGGCGGGSBCEECCCEEEETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEEEEEEEEEESSEE
T ss_pred CCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCC
T ss_conf 87344246997726888999642787459999999304678865782168999999999226762378999963668774
Q ss_pred EEEECCCCEEECCC--------CCEEEECCCEEEEECCC-CCCCC-CCCCCCCCCCCCCCEEECCCE--------ECCCC
Q ss_conf 98623541482189--------86699914614686566-55676-326788623254764606111--------13000
Q T0526 142 PFGTGWHPYFPLSP--------QTRIQAQASGYWLEREQ-WLAGE-FCEQLPQELDFNQPAPLPRQW--------VNNGF 203 (290)
Q Consensus 142 p~~~g~HpyF~~~~--------~~~l~~~~~~~~~~~~~-~~~~~-~~~~~~~~~d~~~~~~~~~~~--------~d~~~ 203 (290)
||++++||||++++ ++.+++++..++..++. .+|++ ...+..+.+||+.++.+.+.. +|+.|
T Consensus 170 p~nlt~H~YFnL~g~~~~~~i~~~~l~~~a~~~~~~~d~~~~ptg~~~~~~~t~fd~~~~~~~~~~~~~~~~~~~~d~~~ 249 (342)
T 1yga_A 170 PINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDTPVFDCTFIIDANK 249 (342)
T ss_dssp ECBCEECCCBCTTTTTCTTCCTTEEEEESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSSCCCCEEEEECTTTT
T ss_pred EEEECCCCEECCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
T ss_conf 68833644585567665575012589981584898057678874214301476422346410222222110135214886
Q ss_pred CCC----------CCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEE
Q ss_conf 689----------9549999789995899998599988999808988876656774999105678888878888861797
Q T0526 204 AGW----------NGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIAL 273 (290)
Q Consensus 204 ~~~----------~~~~~l~~~~~~~~i~i~~~~~~~~~~v~~~~~~~~~~~~~~~vciEP~~~~~da~n~~~~~~~~~L 273 (290)
... ...+++.++.+|++++|.++. |++++|+++...+...++.+|||||| .+|||+|++++.++++|
T Consensus 250 ~~~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~~--p~~qvYT~n~l~~~~~~~~giclEpq-~~pda~N~~~~~~~i~L 326 (342)
T 1yga_A 250 DLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTTE--PTVHLYTGDNLCGKFVPRSGFAVQQG-RYVDAINRDEWRGCVLL 326 (342)
T ss_dssp TCCSSBCTTTSCCEEEEEEECTTTCCEEEEEESS--SEEEEECCTTCCTTSCTTSCBEEEEE-SCSSGGGCHHHHGGGEE
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECC--CEEEEECCCCCCCCCCCCCEEEEECC-CCCCCCCCCCCCCCEEE
T ss_conf 6431336676763589999948998099999289--98999828878997689779999799-89897667479998588
Q ss_pred CCCCEEEEEEEEEEE
Q ss_conf 899839999999998
Q T0526 274 APGESTTSEMSLRVE 288 (290)
Q Consensus 274 ~PGe~~~~~~~i~ve 288 (290)
+|||+++..++++++
T Consensus 327 ~pge~y~~~t~y~F~ 341 (342)
T 1yga_A 327 KRGEVYTSKTQYKFD 341 (342)
T ss_dssp ETTCCEEEEEEEEEE
T ss_pred CCCCEEEEEEEEEEE
T ss_conf 998989889999997
No 5
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, , isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=1.1e-44 Score=297.80 Aligned_cols=282 Identities=16% Similarity=0.155 Sum_probs=236.2
Q ss_pred CEEEEEECC-CEEEEEECCCCEEEEEEECCEEEEECCCCCCHHH----CCCCCEEEEEEEECCCCEEEECCEEEEECCCC
Q ss_conf 938998769-8499991789699999979960893589800210----56673885443330298688799799955447
Q T0526 1 MTIYTLSHG-SLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVAT----DASCFPLVPFANRVSGNRFVWQGREYQLQPNV 75 (290)
Q Consensus 1 m~~~~L~~~-~~~~~i~~~Ga~i~s~~~~g~~~l~~~~~~~~~~----~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~n~ 75 (290)
|.+|||+|+ +++|.|.++||.|++++.+|++++.+++....|. .+.|++++|++|||++|+|.++|+.|+|++|+
T Consensus 373 ~~~~t~~n~~~~~v~~~~~Ga~i~~~~~~~~~vvlg~~~~~~y~~~~~~y~Ga~iGr~anRI~~g~~~~~g~~y~l~~N~ 452 (699)
T 1z45_A 373 ARFVTIGAGTRFQATFANLGASIVDLKVNGQSVVLGYENEEGYLNPDSAYIGATIGRYANRISKGKFSLCNKDYQLTVNN 452 (699)
T ss_dssp SEEEEESTTSSEEEEEESBTTCEEEEEETTEECBCCCSSHHHHTCTTCCCTTCEECSBCSEEGGGEEEETTEEEECCCCB
T ss_pred EEEEEEECCCCEEEEEEECCCEEEEECCCCCEEEECCCCHHHHCCCCCCEECCCCCCCCCEEECCEEEECCEEEEECCCC
T ss_conf 27999944873699998168599996719978883799989970789974186755766868688999999999927899
Q ss_pred CCCCCCCCCCC---CCCEEE---EEEECCCEEEEEEC------CCCCCCCEEEEEEEEEE--CCEEEEEEEEEECCCCCE
Q ss_conf 88667787743---353479---99816988999975------47888565999999984--990699999983589506
Q T0526 76 EWDAHYLHGDG---WLGEWQ---CVSHSDDSLCLVYE------HRSGVYHYRVSQAFHLT--ADTLTVTLSVTNQGAETL 141 (290)
Q Consensus 76 ~~~~~~~HG~a---r~~~w~---v~~~~~~~~~l~~~------~~~~P~~~~l~~~~~L~--~~~L~v~~~v~N~g~~~~ 141 (290)
+. +++||.. ..+.|. +.+.+.+.+++++. ..+||++++++++|+|+ ++.|++.++.++++++++
T Consensus 453 ~~--~~lHGg~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~G~PG~l~~~v~y~l~~~~~~l~i~~~~~~~~d~~t 530 (699)
T 1z45_A 453 GV--NANHSSIGSFHRKRFLGPIIQNPSKDVFTAEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEIVYKGKLTAGEAT 530 (699)
T ss_dssp TT--BEETTGGGCGGGSBCEEEEEEEEETTEEEEEEEEEECGGGSSSSSEEEEEEEEEEETTTTEEEEEEEEEEEESSEE
T ss_pred CC--CCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCCE
T ss_conf 99--8778998888854886777750788669999998889888998807899999999669991799999970577523
Q ss_pred EEEECCCCEEECCC-------CCEEEECCCEEEEECCCCCCCCC-CCCCCCCCCCCCCEEECC--CEECCCCCCCC----
Q ss_conf 98623541482189-------86699914614686566556763-267886232547646061--11130006899----
Q T0526 142 PFGTGWHPYFPLSP-------QTRIQAQASGYWLEREQWLAGEF-CEQLPQELDFNQPAPLPR--QWVNNGFAGWN---- 207 (290)
Q Consensus 142 p~~~g~HpyF~~~~-------~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~--~~~d~~~~~~~---- 207 (290)
|+++++|+||++++ ++.+++++..+...++..+|++. .++.++.+||+.++.++. ..+|++|....
T Consensus 531 ~~n~tnH~YfNL~g~~~~~i~~h~l~i~a~~~~~~d~~~iPtG~~~~v~~t~~d~~~~~~i~~~~~~~d~~~~~~~~~~~ 610 (699)
T 1z45_A 531 PINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQFDCCFVVDENAKP 610 (699)
T ss_dssp ECBCEECCEECTTTTSCSSSTTEEEEESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCCCEEEEESCSSCCC
T ss_pred EEECCCCCEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCEECCCCCCCCCCCEECCCCCCCCCCEEEECCCCCC
T ss_conf 65514644172378877542442998467849740787775887040679998788860357668898722886798764
Q ss_pred -----------CEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCC
Q ss_conf -----------549999789995899998599988999808988876656774999105678888878888861797899
Q T0526 208 -----------GQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPG 276 (290)
Q Consensus 208 -----------~~~~l~~~~~~~~i~i~~~~~~~~~~v~~~~~~~~~~~~~~~vciEP~~~~~da~n~~~~~~~~~L~PG 276 (290)
..+++..+.+|+.+++.++. |.+++|+++........+..||+||+ .+|||+|++++++.++|+||
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~sg~~l~v~t~~--p~~~~yt~n~~~~~~~~~~g~~lE~q-~~pda~n~~~f~~~i~l~~g 687 (699)
T 1z45_A 611 SQINTLNNELTLIVKAFHPDSNITLEVLSTE--PTYQFYTGDFLSAGYEARQGFAIEPG-RYIDAINQENWKDCVTLKNG 687 (699)
T ss_dssp CCSBCTTSCCEEEEEEEETTTTEEEEEEESS--SEEEEECCTTCCTTCCTTSCEEEEEE-SCSSGGGCTTTGGGGEEETT
T ss_pred CCCCCCCCCCEEEEEEEECCCCCEEEEEECC--CEEEEECCCCCCCCCCCCCEEEEECC-CCCCCCCCCCCCCCEECCCC
T ss_conf 3334667872499999908989889999689--76999689988988799888998268-99886678689986553995
Q ss_pred CEEEEEEEEEE
Q ss_conf 83999999999
Q T0526 277 ESTTSEMSLRV 287 (290)
Q Consensus 277 e~~~~~~~i~v 287 (290)
|++...+.+++
T Consensus 688 ~~y~~~t~y~F 698 (699)
T 1z45_A 688 ETYGSKIVYRF 698 (699)
T ss_dssp CEEEEEEEEEE
T ss_pred CEEEEEEEEEE
T ss_conf 98988999997
No 6
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=100.00 E-value=2.7e-44 Score=295.37 Aligned_cols=279 Identities=18% Similarity=0.203 Sum_probs=220.0
Q ss_pred EEEEEECCC-EEEEEECCCCEEEEEEECCEEEEECCCCCCHH---HCCCCCEEEEEEEECCCCEEEECCEEEEECCCCCC
Q ss_conf 389987698-49999178969999997996089358980021---05667388544333029868879979995544788
Q T0526 2 TIYTLSHGS-LKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVA---TDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEW 77 (290)
Q Consensus 2 ~~~~L~~~~-~~~~i~~~Ga~i~s~~~~g~~~l~~~~~~~~~---~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~n~~~ 77 (290)
.+|||+|+. ++|+|+++||.|++|+.++++++.+++..+.+ ..+.+.+++||+|||++|+|.++|+.|+|++|++.
T Consensus 13 ~~~tL~N~~g~~v~i~~~GA~i~~~~~~~~~vvlg~~~~~~y~~~~~~~Ga~iGr~anRI~~g~f~~~G~~y~L~~Ne~~ 92 (347)
T 1nsx_A 13 DLISLTNKAGVTISFTNLGARIVDWQKDGKHLILGFDSAKEYLEKDAYPGATVGPTAGRIKDGLVKISGKDYILNQNEGP 92 (347)
T ss_dssp EEEEEECTTSCEEEEETBTTEEEEEEETTEESBCCCSSHHHHHHTCSCTTCEECSBCSEEGGGEEEETTEEEECCCCBTT
T ss_pred EEEEEECCCCCEEEEECCCEEEEEECCCCCEEEECCCCHHHHHHCCCCCCCEECCCCCCCCCCEEEECCEEEEECCCCCC
T ss_conf 69999959983999979886999703699758966999899831788527571451671138804089989991478898
Q ss_pred CCCCCCCCC---CCCEEEEEEE---CCCEEEEEECC----CCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEECC
Q ss_conf 667787743---3534799981---69889999754----7888565999999984990699999983589506986235
Q T0526 78 DAHYLHGDG---WLGEWQCVSH---SDDSLCLVYEH----RSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGW 147 (290)
Q Consensus 78 ~~~~~HG~a---r~~~w~v~~~---~~~~~~l~~~~----~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~g~ 147 (290)
+++||.. ..+.|++... ++.+|+|++.. .+||++++++++|+|+++. ++.++++|.+++++|+++++
T Consensus 93 --~~lHGG~~g~~~~~w~~~~~~~~~~~~v~~~~~~~dg~~GyPg~~~~~vtY~L~~~~-~l~i~~~a~s~~~tp~nlt~ 169 (347)
T 1nsx_A 93 --QTLHGGEESIHTKLWTYEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDN-KWKIHYEAISDKDTVFNPTG 169 (347)
T ss_dssp --BEETTSTTCGGGSBCEEEEEECSSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTS-EEEEEEEEEESSCEECBCEE
T ss_pred --CCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEECCCC-EEEEEEEEECCCCEEEECCC
T ss_conf --755788655576002467652788438999999689878875789999999964598-48999997437754764065
Q ss_pred CCEEECCC-------CCEEEECCCEEEEE-CCCCCCCC-CCCCCCCCCCCCCCEEECCC------------EECCCCCCC
Q ss_conf 41482189-------86699914614686-56655676-32678862325476460611------------113000689
Q T0526 148 HPYFPLSP-------QTRIQAQASGYWLE-REQWLAGE-FCEQLPQELDFNQPAPLPRQ------------WVNNGFAGW 206 (290)
Q Consensus 148 HpyF~~~~-------~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~~~~d~~~~~~~~~~------------~~d~~~~~~ 206 (290)
||||++++ +++|++++..++.. ++..+|++ ..++.++.+||+.++.+++. .+|+||...
T Consensus 170 H~YFnL~g~~~~~i~~h~L~i~a~~~l~~~D~~~iPtG~~~~v~~t~~Dfr~~~~i~~~~~~~~~~~~~~~G~D~~f~l~ 249 (347)
T 1nsx_A 170 NVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLD 249 (347)
T ss_dssp CCEECTTSSTTSCGGGSEEEECEEEECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHHCCCHHHHHHTSCEEEEEES
T ss_pred CCCEECCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCEEEC
T ss_conf 25064477556752007999803758996278877678255477998656677284542412024411357888634745
Q ss_pred C-----CEEEEEECCCCCEEEEEECCCCCEEEEEECCCCC-------CCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEC
Q ss_conf 9-----5499997899958999985999889998089888-------766567749991056788888788888617978
Q T0526 207 N-----GQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAF-------DKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALA 274 (290)
Q Consensus 207 ~-----~~~~l~~~~~~~~i~i~~~~~~~~~~v~~~~~~~-------~~~~~~~~vciEP~~~~~da~n~~~~~~~~~L~ 274 (290)
. ..+++.. ++++++|.++. |.+++|+++... .....+..|||||| ++|||+|.++++. ++|+
T Consensus 250 ~~~~~~~~~~l~~--~~~~l~v~T~~--p~~qvYT~n~l~~~~~~~~~~~~~~~giclEpq-~~Pda~N~~~f~~-i~L~ 323 (347)
T 1nsx_A 250 QLGLDKEQARLTL--DDTSISVFTDQ--PSIVIFTANFGDLGTLYHEKKQVHHGGITFECQ-VSPGSEQIPELGD-ISLK 323 (347)
T ss_dssp SCBTTSCCEEEEE--TTEEEEEEESS--SEEEEECCCCTTCCCEETTEECCTTCCEECEEE-SCTTTTTCGGGCC-CEEC
T ss_pred CCCCCCCEEEEEE--CCCEEEEEECC--CEEEEEECCCCCCCCCCCCCCCCCCCEEEEECC-CCCCCCCCCCCCC-EEEC
T ss_conf 6778730389974--89608999389--979999077677655678876787789999557-8998657778998-0899
Q ss_pred CCCEEEEEEEEEEEE
Q ss_conf 998399999999985
Q T0526 275 PGESTTSEMSLRVEW 289 (290)
Q Consensus 275 PGe~~~~~~~i~ve~ 289 (290)
|||++...+.+++++
T Consensus 324 pge~y~~~t~Y~f~~ 338 (347)
T 1nsx_A 324 AGEKYQATTIYSLHT 338 (347)
T ss_dssp TTCEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEEEE
T ss_conf 999998899999999
No 7
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=100.00 E-value=5.6e-44 Score=293.31 Aligned_cols=281 Identities=14% Similarity=0.194 Sum_probs=229.4
Q ss_pred EEEEECCC-EEEEEECCCCEEEEEEE---CC--EEEEECCCCCCHH---HCCCCCEEEEEEEECCCCEEEECCEEEEECC
Q ss_conf 89987698-49999178969999997---99--6089358980021---0566738854433302986887997999554
Q T0526 3 IYTLSHGS-LKLDVSDQGGVIEGFWR---DT--TPLLRPGKKSGVA---TDASCFPLVPFANRVSGNRFVWQGREYQLQP 73 (290)
Q Consensus 3 ~~~L~~~~-~~~~i~~~Ga~i~s~~~---~g--~~~l~~~~~~~~~---~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~ 73 (290)
+|+|+|+. ++|+|.++||.|++|+. +| ++++++++....+ +.+.+.+++||+|||++|+|.++|+.|+|++
T Consensus 14 ~i~l~N~~g~~v~i~~~GA~i~~~~vpd~~G~~~~vvlg~~~~~~y~~~~~~~Ga~iGr~anRI~~g~f~~~G~~y~L~~ 93 (339)
T 1lur_A 14 FIEIANKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQYTMTP 93 (339)
T ss_dssp CEEEECSSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCTTCEECSBCSEEGGGEEEETTEEEECCC
T ss_pred EEEEECCCCCEEEEECCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCEECCCCCEEECCEEEECCEEEEECC
T ss_conf 69999699959999896929999998888898814288899989995388860658877368578988989999999148
Q ss_pred CCCCCCCCCCCCC---CCCEEEEEEECCCEEEEEECC----CCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEEC
Q ss_conf 4788667787743---353479998169889999754----788856599999998499069999998358950698623
Q T0526 74 NVEWDAHYLHGDG---WLGEWQCVSHSDDSLCLVYEH----RSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTG 146 (290)
Q Consensus 74 n~~~~~~~~HG~a---r~~~w~v~~~~~~~~~l~~~~----~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~g 146 (290)
|++. +.+||.. +.+.|+++++++++++|++.. .+||+++.++++|+|+++. .+.+++++.+++++|++++
T Consensus 94 Ne~~--n~lHGg~~g~~~~~W~v~~~~~~~v~l~~~~~~g~~GyPg~l~~~vtY~L~~~~-~l~i~~~a~~d~~tp~nlt 170 (339)
T 1lur_A 94 NNGP--HYLHGGPNGLGYRKWEVVRHAPESVSFSVRANEQDDGLPGDAKIDVTYTVNDRN-QLIIEHHATCDTPGLLALT 170 (339)
T ss_dssp SBTT--BEETTCTTSGGGSBCEEEEEETTEEEEEEEEEHHHHSSSSEEEEEEEEEECTTS-EEEEEEEEECSSCEECBCE
T ss_pred CCCC--CCCCCCCCCCCEECCEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCC-EEEEEEEEECCCCCEEEEC
T ss_conf 9998--555888776313521147705872299998178767877448999999965698-6999999755987057851
Q ss_pred CCCEEECC-----CCCEEEECCCEEEEECCCCCCCC-CCCCCCCCCCCCCCEEECCCEECC--------CCCCC------
Q ss_conf 54148218-----98669991461468656655676-326788623254764606111130--------00689------
Q T0526 147 WHPYFPLS-----PQTRIQAQASGYWLEREQWLAGE-FCEQLPQELDFNQPAPLPRQWVNN--------GFAGW------ 206 (290)
Q Consensus 147 ~HpyF~~~-----~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~d~--------~~~~~------ 206 (290)
+||||+++ .++.+++++..++..++..+|++ ...+.++.+||+.++.+++...|. +|...
T Consensus 171 ~H~YFNL~g~~~i~~h~L~i~a~~~l~~D~~~iPtG~~~~v~~t~~Dfr~~~~l~~~~~d~~~~~~~d~~~~~~~~~~~~ 250 (339)
T 1lur_A 171 NHAYWNLDGSDTVAEHFLEMEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEELLDLDNDLVITKKTPPS 250 (339)
T ss_dssp ECCEECSSCCSCSTTCEEEECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSSCCCCCEEEEEECCCCC--
T ss_pred CCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCC
T ss_conf 54413257887767739998668588758555206754634688765558630575322434036027867984378987
Q ss_pred --CCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCC------CCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCE
Q ss_conf --95499997899958999985999889998089888------7665677499910567888887888886179789983
Q T0526 207 --NGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAF------DKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGES 278 (290)
Q Consensus 207 --~~~~~l~~~~~~~~i~i~~~~~~~~~~v~~~~~~~------~~~~~~~~vciEP~~~~~da~n~~~~~~~~~L~PGe~ 278 (290)
...+++.++.+|+++++..+. |++++|+++... ..+..+..|||||| .+|||+|.+++.. ++|+|||.
T Consensus 251 ~~~~~~~l~~~~sg~~l~v~t~~--p~~qvYT~n~l~~~~~~g~~~~~~~gi~lEpq-~~PdA~N~~~f~~-~iL~pge~ 326 (339)
T 1lur_A 251 TPSTYLRFWSEKSGIELSITTSY--PVIHLYASKFLDCKGKKGEHYKANKALAIEPQ-FHSAAPNFDHFPD-VSLRPGDH 326 (339)
T ss_dssp --CCCEEEECTTTCEEEEEEESS--SEEEEECCTTCCEECGGGCEECTTCCEEEEEE-SCTTGGGCTTSCC-CEECTTCC
T ss_pred CCCEEEEEECCCCCEEEEEECCC--CEEEEECCCCCCCCCCCCCCCCCCCEEEEECC-CCCCCCCCCCCCC-EEECCCCE
T ss_conf 75169999639988599996799--88999689877777878879688888999546-9998556778998-08999999
Q ss_pred EEEEEEEEEEEC
Q ss_conf 999999999859
Q T0526 279 TTSEMSLRVEWL 290 (290)
Q Consensus 279 ~~~~~~i~ve~~ 290 (290)
++..+.++++.+
T Consensus 327 y~~~t~Y~Fs~~ 338 (339)
T 1lur_A 327 YCQEIVYTFSHV 338 (339)
T ss_dssp EEEEEEEEEEEC
T ss_pred EEEEEEEEEECC
T ss_conf 988999998717
No 8
>2cir_A Hexose-6-phosphate mutarotase; mannose-6-phosphate-1-epimerase, galactose-6-phosphate-1- epimerase, hypothetical protein, isomerase; HET: BG6; 1.6A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=4.2e-44 Score=294.12 Aligned_cols=254 Identities=15% Similarity=0.173 Sum_probs=187.9
Q ss_pred EEEECCCEEEEEECCCCEEEEEEECCEEEEECCCCCC----HHHCCCCCEEEEEEEECCCCEEEECCEEEEECCCCCCCC
Q ss_conf 9987698499991789699999979960893589800----210566738854433302986887997999554478866
Q T0526 4 YTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSG----VATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDA 79 (290)
Q Consensus 4 ~~L~~~~~~~~i~~~Ga~i~s~~~~g~~~l~~~~~~~----~~~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~n~~~~~ 79 (290)
..++|+..+|+|+.+||+|+||+.+|+|+||..+... ...++|.|+||||+||+.+ +|+.|+|
T Consensus 13 ~~~~~~~~~a~i~~~Ga~l~s~~~~g~e~L~~s~~a~~~~~~~irGGiPvlfP~~G~~~~-----~g~~~~l-------- 79 (297)
T 2cir_A 13 THPADETTSVHILKYGATVYSWKLKSEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNST-----DEHLSKL-------- 79 (297)
T ss_dssp EETTEEEEEEEEETBTTEEEEEEETTEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSS-----STTGGGS--------
T ss_pred ECCCCCCEEEEEECCCCEEEEEEECCEEEEECCCHHHCCCCCCCCCCCEEEEEEECCCCC-----CCCCCCC--------
T ss_conf 906999789999878929999998998988438777617999755888398833088988-----9862689--------
Q ss_pred CCCCCCCCCCEEEEEEECC---CEEEEEECC--------CCCCCCEEEEEEEEEECCEEEEEEEEEECC-CCCEEEEECC
Q ss_conf 7787743353479998169---889999754--------788856599999998499069999998358-9506986235
Q T0526 80 HYLHGDGWLGEWQCVSHSD---DSLCLVYEH--------RSGVYHYRVSQAFHLTADTLTVTLSVTNQG-AETLPFGTGW 147 (290)
Q Consensus 80 ~~~HG~ar~~~w~v~~~~~---~~~~l~~~~--------~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g-~~~~p~~~g~ 147 (290)
++|||+|+++|+|+++++ .++++++.. +.|||+|+++++|+|.+++|+++++|+|+| +++|||++|+
T Consensus 80 -p~HGfaR~~~W~v~~~~~~~~~~v~~~l~~~~~~~~~~~~yPf~f~l~~~y~L~~~~L~~~~~v~N~g~~~~mpf~~G~ 158 (297)
T 2cir_A 80 -PQHGLARNSTWEFLGQTKENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLF 158 (297)
T ss_dssp -CTTBSGGGSBCEEEEEEEETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECSSEEEEEEEEECCCSSCCEEEEEEE
T ss_pred -CCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHHHCCCCEEEEEEEEEECCCEEEEEEEEEECCCCCCEEEEEEC
T ss_conf -8885225643699886058874699999846799779821884179999999889848999999919977422877852
Q ss_pred CCEEECCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 41482189866999146146865665567632678862325476460611113000689954999978999589999859
Q T0526 148 HPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTP 227 (290)
Q Consensus 148 HpyF~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~i~i~~~~ 227 (290)
||||++++...+.+.........+......... ..+.......+|++|....+...+.+...+.++.+....
T Consensus 159 HpYF~v~~~~~~~~~~l~~~~~~d~~~~~~~~~--------~~~~~~~~~~~D~vy~~~~~~~~i~~~~~~~~~~~~~~~ 230 (297)
T 2cir_A 159 HTYFRIEDIEGTMVSNLAGMKLYDQLLKESYVD--------KHPVVTFNQETDVIYQNVSAERAIQIVDKGVQIHTLKRY 230 (297)
T ss_dssp CCEEECSCGGGEEEESCTTCEEEETTTTEEEEC--------CSSSBCCSSCEEEEECCCCTTCCEEEEETTEEEEEEEEE
T ss_pred CCEEECCCCCCEEECCCCCCEEEEECCCCCCCC--------CCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEEC
T ss_conf 626844864523882688860564036776256--------787241685404798279987399995899609999938
Q ss_pred CCCEEEEEECC-------CCCCC-CCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEE
Q ss_conf 99889998089-------88876-6567749991056788888788888617978998399999999985
Q T0526 228 PAPCYFIFVSD-------PAFDK-GYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEW 289 (290)
Q Consensus 228 ~~~~~~v~~~~-------~~~~~-~~~~~~vciEP~~~~~da~n~~~~~~~~~L~PGe~~~~~~~i~ve~ 289 (290)
+++.+++|++. ..... ..+++||||||.+. .++++|+|||+|+.+++|..+.
T Consensus 231 ~~~~~vvWnP~~~~~~~~~d~ep~~~~~~~vCVEp~~~----------~~~v~L~PGes~~~~q~l~~~~ 290 (297)
T 2cir_A 231 NLPDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHV----------HDFISLAPGKKWNAYQLLCKEE 290 (297)
T ss_dssp SCCEEEEEECHHHHHHHCTTCCSTTGGGGEEEEEEEEE----------EEEEEECTTCEEEEEEEEECC-
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCC----------CCCEEECCCCEEEEEEEEECCC
T ss_conf 99979997997446761111488876479899894557----------9988989999699999995366
No 9
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=1.2e-41 Score=278.76 Aligned_cols=281 Identities=18% Similarity=0.187 Sum_probs=223.0
Q ss_pred EEEEEECCCEEEEEECCCCEEEEEEEC---C--EEEEECCCCCCHH---HCCCCCEEEEEEEECCCCEEEECCEEEEECC
Q ss_conf 389987698499991789699999979---9--6089358980021---0566738854433302986887997999554
Q T0526 2 TIYTLSHGSLKLDVSDQGGVIEGFWRD---T--TPLLRPGKKSGVA---TDASCFPLVPFANRVSGNRFVWQGREYQLQP 73 (290)
Q Consensus 2 ~~~~L~~~~~~~~i~~~Ga~i~s~~~~---g--~~~l~~~~~~~~~---~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~ 73 (290)
..|||+|++++|+|.++||.|++|+.. | .+++++++....+ +.+.+++|+||+|||++|+|.++|+.|+|+.
T Consensus 22 ~~~tl~n~~~~v~i~~~GA~i~~l~~~~~~G~~~~vvlg~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~~y~l~~ 101 (344)
T 1snz_A 22 EKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHLAI 101 (344)
T ss_dssp EEEEEECSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTTCEECSBCSEEGGGEEEETTEEEECCC
T ss_pred EEEEEECCCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCEEEEECCCEECCEEEECCEEEECCC
T ss_conf 99999879999999775909999998888998877277899989994278866878652788259998998999998167
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECC----CCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEECCCC
Q ss_conf 4788667787743353479998169889999754----788856599999998499069999998358950698623541
Q T0526 74 NVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEH----RSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHP 149 (290)
Q Consensus 74 n~~~~~~~~HG~ar~~~w~v~~~~~~~~~l~~~~----~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~g~Hp 149 (290)
|++...++.|++.+...|...+.++++++|.+.. .+|||.++++++|+|.++.+.+++ +|.+++++|+++++|+
T Consensus 102 n~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~Pg~~~~~v~y~l~~~~~~~~~--~~~~~~~tp~~~~~h~ 179 (344)
T 1snz_A 102 NKEPNSLHGGVRGFDKVLWTPRVLSNGVQFSRISPDGEEGYPGELKVWVTYTLDGGELIVNY--RAQASQATPVNLTNHS 179 (344)
T ss_dssp TBTTBEETTSSSCGGGSBCEEEEETTEEEEEEEECTTGGGCCSCEEEEEEEEEETTEEEEEE--EEEESSCEECBCEECC
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEE--ECCCCCCCCCCCCCCC
T ss_conf 88986433578860268988315442699999806776898741558999990488237788--4157878663222420
Q ss_pred EEECC-------CCCEEEECCCEEEEECCCCCCCC-CCCCCCCCCCCCCCEEECCCEE-------CCCCC-----CCCCE
Q ss_conf 48218-------98669991461468656655676-3267886232547646061111-------30006-----89954
Q T0526 150 YFPLS-------PQTRIQAQASGYWLEREQWLAGE-FCEQLPQELDFNQPAPLPRQWV-------NNGFA-----GWNGQ 209 (290)
Q Consensus 150 yF~~~-------~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------d~~~~-----~~~~~ 209 (290)
||++. +++.+++++...+..++..+|++ ...+..+.+||+.++.+++... |..+. .....
T Consensus 180 yfnl~~~~~~~i~~~~l~i~a~~~~~~d~~~iptg~~~~~~~~~~Df~~~~~i~~~~~~~~~~~~d~~~~~~~~~~~~~~ 259 (344)
T 1snz_A 180 YFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEKHFC 259 (344)
T ss_dssp CBCTTCTTCSCCTTCEEEECEEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHHTTCCCCEEEEEECCCSSCEEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCE
T ss_conf 32347554452001110003044998776457567643566883031077443521000233212553254268877313
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEECCCCCC--------CCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEE
Q ss_conf 999978999589999859998899980898887--------665677499910567888887888886179789983999
Q T0526 210 ARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFD--------KGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTS 281 (290)
Q Consensus 210 ~~l~~~~~~~~i~i~~~~~~~~~~v~~~~~~~~--------~~~~~~~vciEP~~~~~da~n~~~~~~~~~L~PGe~~~~ 281 (290)
+++.++.+++.+++..+ .+++++|+++.... ....+.+||||||+ +|||+|.+++. .++|+|||+++.
T Consensus 260 ~~l~~~~s~~~l~v~s~--~p~l~vyT~~~~~~~~~~~~g~~~~~~~giclEPq~-~PDA~N~~~~~-~~vL~pge~y~~ 335 (344)
T 1snz_A 260 ARVHHAASGRVLEVYTT--QPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQN-WPDAVNQPRFP-PVLLRPGEEYDH 335 (344)
T ss_dssp EEEEETTTTEEEEEEES--SSEEEEECCTTCEEEEECGGGCEEETTSCBEEEEES-CTTGGGCTTSC-CCEECTTSCEEE
T ss_pred EEEEECCCCCEEEECCC--CCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCCCCCC-CEEECCCCEEEE
T ss_conf 89980899946787389--989999878987864437788466887899996888-98765788899-849999898989
Q ss_pred EEEEEEE
Q ss_conf 9999998
Q T0526 282 EMSLRVE 288 (290)
Q Consensus 282 ~~~i~ve 288 (290)
++++++.
T Consensus 336 ~t~y~Fs 342 (344)
T 1snz_A 336 TTWFKFS 342 (344)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
T ss_conf 9999999
No 10
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, mutarotase, YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=5.1e-41 Score=274.70 Aligned_cols=247 Identities=11% Similarity=0.076 Sum_probs=188.9
Q ss_pred CEEEEEECCCEEEEEECCCCEEEEEEEC-CEEEEECCCCCC----HHHCCCCCEEEEEEEECCCCEEEECCEEEEECCCC
Q ss_conf 9389987698499991789699999979-960893589800----21056673885443330298688799799955447
Q T0526 1 MTIYTLSHGSLKLDVSDQGGVIEGFWRD-TTPLLRPGKKSG----VATDASCFPLVPFANRVSGNRFVWQGREYQLQPNV 75 (290)
Q Consensus 1 m~~~~L~~~~~~~~i~~~Ga~i~s~~~~-g~~~l~~~~~~~----~~~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~n~ 75 (290)
|++++|+|+..+|+|+.+||+|+||+.. ++|+||..+... ...++|+|+||||+|+.++
T Consensus 41 l~~i~i~~~~~~a~i~l~GA~l~Sw~~~~~~e~Lw~s~~a~~~~~~aiRGGiPicfP~fG~~~~---------------- 104 (309)
T 2hta_A 41 LDLIVVDHPQVKASFALQGAHLLSWKPVGEEEVLWLSNNTPFKTGVALRGGVPICWPWFGPAAQ---------------- 104 (309)
T ss_dssp EEEEEEEETTEEEEEETBTTEEEEEEETTSCCCBCBCTTCCCCTTCCCSBSBCEEBSCCSSCSS----------------
T ss_pred CCEEEEECCCEEEEEECCCCEEEEEEECCCCEEEEECCHHHCCCCCCCCCCCEEEEEECCCCCC----------------
T ss_conf 6589997899899998889899899949998889808254036888767888698623289987----------------
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCC----EEEEEECC-----CCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEEC
Q ss_conf 886677877433534799981698----89999754-----788856599999998499069999998358950698623
Q T0526 76 EWDAHYLHGDGWLGEWQCVSHSDD----SLCLVYEH-----RSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTG 146 (290)
Q Consensus 76 ~~~~~~~HG~ar~~~w~v~~~~~~----~~~l~~~~-----~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~g 146 (290)
.++|.|||||+++|++++++++ .++|++.. ..|||+|+++++|+|.. +++|+|+++++|||++|
T Consensus 105 --~~lp~HGFAR~~~W~l~~~~~~~~~~~v~~~L~~~~~t~~~~P~~f~l~~~~~L~~-----~l~v~N~~~~~~pf~~g 177 (309)
T 2hta_A 105 --QGLPSHGFARNLPWALKAHNEDDNGVMLTFELQSSEATRKYWPHDFTLLARFKVGK-----TCEIELEAHGEFATTSA 177 (309)
T ss_dssp --TTCCTTBSGGGSBCEEEEEEECSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEESS-----SEEEEEEEESSEEEEEE
T ss_pred --CCCCCCCCEECCCEEEEEECCCCCCEEEEEEECCCCCHHHHCCEEEEEEEEEECCC-----EEEEEECCCCCCCCCCC
T ss_conf --88987633126854899843889818999997898302331750079999998686-----59999745885101502
Q ss_pred CCCEEECCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCCCCCEEEEEECCCCCEEEEEEC
Q ss_conf 54148218986699914614686566556763267886232547646061111300068995499997899958999985
Q T0526 147 WHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETT 226 (290)
Q Consensus 147 ~HpyF~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~i~i~~~ 226 (290)
+||||++++..++++.+......+. ......... .......+..+|++|....+.+.|.++..++.|++..+
T Consensus 178 lHpYF~V~d~~~~~v~gl~~~~~D~-~~~~~~~~~-------~~~~~~~~~~~driy~~~~~~~~i~d~~~~r~i~i~~~ 249 (309)
T 2hta_A 178 LHSYFNVGDIANVKVSGLGDRFIDK-VNDAKEGVL-------TDGIQTFPDRTDRVYLNPEACSVIHDATLNRTIDVVHH 249 (309)
T ss_dssp ECCEEECSCGGGCEEECCCSEEEET-TTTTEEEEC-------SSSCEECSSCEEEEESSCCSEEEEEETTTTEEEEEEEE
T ss_pred CCCEEECCCHHCCEEECCCCCCCCC-CCCCCCCEE-------CCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEC
T ss_conf 5840665760020897678530303-557544252-------58855246855799758998689997899988999974
Q ss_pred CCCCEEEEEECC-------CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEE
Q ss_conf 999889998089-------888766567749991056788888788888617978998399999999985
Q T0526 227 PPAPCYFIFVSD-------PAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEW 289 (290)
Q Consensus 227 ~~~~~~~v~~~~-------~~~~~~~~~~~vciEP~~~~~da~n~~~~~~~~~L~PGe~~~~~~~i~ve~ 289 (290)
+++..+||++. .++++..+++|||||||+. ...+.+.||++++.+++|+|+.
T Consensus 250 -g~~~~VVWnP~~~~a~~m~D~~~~~~~~fvCVEP~~~----------~~~~~~~~g~~~~~~q~i~v~~ 308 (309)
T 2hta_A 250 -HHLNVVGWNPGPALSVSMGDMPDDGYKTFVCVETVYA----------TAPQQATEEKPSRLAQTICVAK 308 (309)
T ss_dssp -SCSEEEEEECHHHHHHHCTTSCTTGGGGEEEEEEEEE----------EEEEEEBTTBCEEEEEEEEEEC
T ss_pred -CCCEEEEECCCHHHCCCCCCCCCCCCCCEEEECCCCC----------CCCCCCCCCCCEEEEEEEEEEC
T ss_conf -9983999796346423012376678888899798006----------9984537999679999999974
No 11
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=3.1e-38 Score=257.17 Aligned_cols=237 Identities=17% Similarity=0.159 Sum_probs=179.9
Q ss_pred CEEEEEECCCEEEEEECCCCEEEEEEEC-C-EEEEECCCCCC----HHHCCCCCEEEEEEEECCCCEEEECCEEEEECCC
Q ss_conf 9389987698499991789699999979-9-60893589800----2105667388544333029868879979995544
Q T0526 1 MTIYTLSHGSLKLDVSDQGGVIEGFWRD-T-TPLLRPGKKSG----VATDASCFPLVPFANRVSGNRFVWQGREYQLQPN 74 (290)
Q Consensus 1 m~~~~L~~~~~~~~i~~~Ga~i~s~~~~-g-~~~l~~~~~~~----~~~~~~~~~l~P~~~r~~~~~~~~~G~~~~l~~n 74 (290)
|++++|+|+..+|+|+.+||+|+||+.+ | +|+||.++... ...++|+|+||||+|+..
T Consensus 21 l~~~~l~~~~~~a~i~l~Ga~l~s~~~~~g~~~~Lw~s~~a~~~~~~~IRGGiPv~fP~fG~~~---------------- 84 (270)
T 1jov_A 21 IPVLHLKHAVGTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVK---------------- 84 (270)
T ss_dssp EEEEEEEETTEEEEEETBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGGS----------------
T ss_pred CCEEEEECCCEEEEEECCCCEEEEEEECCCCEEEEEECCHHHCCCCCCCCCCCEECCCCCCCCC----------------
T ss_conf 0289994899899998999689999979998037994847863799963486626453039999----------------
Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCC--EEEEEECCCCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEECCCCEEE
Q ss_conf 7886677877433534799981698--89999754788856599999998499069999998358950698623541482
Q T0526 75 VEWDAHYLHGDGWLGEWQCVSHSDD--SLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFP 152 (290)
Q Consensus 75 ~~~~~~~~HG~ar~~~w~v~~~~~~--~~~l~~~~~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~g~HpyF~ 152 (290)
.|.|||||+++|++++++++ .+.+++....+||.|+++++|+|+ ++++++|+++++|||++|+||||+
T Consensus 85 -----~p~HGFAR~~~W~l~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~lt-----~~~~v~n~~~~~~~f~~glHpYF~ 154 (270)
T 1jov_A 85 -----QPAHGTARIRLWQLSHYYISVHKVRLEFELFSDLNIIEAKVSMVFT-----DKCHLTFTHYGEESAQAALHTYFN 154 (270)
T ss_dssp -----SSTTBSGGGSBCEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEES-----SSEEEEEEECCSSCEEEEECCEEE
T ss_pred -----CCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEC-----CEEEEEECCCCCCEEEEEEEEEEE
T ss_conf -----8989751276249977617762389972345787632189999934-----237999746997147775401275
Q ss_pred CCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 18986699914614686566556763267886232547646061111300068995499997899958999985999889
Q T0526 153 LSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCY 232 (290)
Q Consensus 153 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~ 232 (290)
+++..++.+.+......++... .. .... .+..+ ...+|++|......+.+.++..++.+.+..+ +++..
T Consensus 155 v~d~~~~~v~gl~~~~~~~~~~-~~--~~~~------~~~~~-~~~~d~iy~~~~~~~~i~d~~~~~~i~i~~~-g~~~~ 223 (270)
T 1jov_A 155 IGDINQVEVQGLPETCFNSLNQ-QQ--ENVP------SPRHI-SENVDCIYSAENMQNQILDKSFNRTIALHHH-NASQF 223 (270)
T ss_dssp CSCGGGEEEESCCSEEEETTTT-EE--EECC------SSBCC-SSCEEEEEECSSSEEEEEETTTTEEEEEEEE-SCSEE
T ss_pred CCCCCCEEEECCCCCCEECCCC-CC--EECC------CCCCC-CCCEEEEEECCCCCEEEEECCCCCEEEEEEC-CCCCE
T ss_conf 1783216996788644100015-32--1037------87135-7778799917998789997899988999984-99968
Q ss_pred EEEECCC----CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEE
Q ss_conf 9980898----88766567749991056788888788888617978998399999999
Q T0526 233 FIFVSDP----AFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLR 286 (290)
Q Consensus 233 ~v~~~~~----~~~~~~~~~~vciEP~~~~~da~n~~~~~~~~~L~PGe~~~~~~~i~ 286 (290)
+||++.. ++.+..+++||||||... ..+|+|||+++.+++|+
T Consensus 224 vVWnP~~~~a~~m~d~~~~~fvCVEpa~~------------~~~L~PGes~t~~~~i~ 269 (270)
T 1jov_A 224 VLWNPWHKKTSGMSETGYQKMLCLETARI------------HHLLEFGESLSVEISLK 269 (270)
T ss_dssp EEEECTTSCCTTCCTTGGGGEEEEEEEEE------------EEEECTTCEEEEEEEEC
T ss_pred EEECCCCCCCCCCCCCCCCCEEEECCCCC------------CCCCCCCCEEEEEEEEE
T ss_conf 99797410004174478867899792677------------76088999199999992
No 12
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=96.95 E-value=0.016 Score=32.69 Aligned_cols=126 Identities=12% Similarity=0.118 Sum_probs=62.5
Q ss_pred EEEEEECCCEEEEEECCCCEEEEEEECCEEEEECCCCCCHHHCCCCCE-EEE-EEEECCCCEEEECCEEEEECCCCCCCC
Q ss_conf 389987698499991789699999979960893589800210566738-854-433302986887997999554478866
Q T0526 2 TIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFP-LVP-FANRVSGNRFVWQGREYQLQPNVEWDA 79 (290)
Q Consensus 2 ~~~~L~~~~~~~~i~~~Ga~i~s~~~~g~~~l~~~~~~~~~~~~~~~~-l~P-~~~r~~~~~~~~~G~~~~l~~n~~~~~ 79 (290)
..|+|+|+-++++|+.+||.|.++..+.- - ...+ ...|+ |+. -.++..-..+.+ +..+.....
T Consensus 4 ~~itv~nd~~~~~is~~Gg~I~~~~Lk~y--~--~~~~-----~~~p~~L~~~~~~~~~~~~~g~------~~~~~~~~~ 68 (280)
T 3bs6_A 4 KLISVKTDVLDLTINTRGGDVEQALLPAY--P--KELN-----STQPFQLLETSPQFIYQAQSGL------TGRDGPDNP 68 (280)
T ss_dssp CEEEEECSSCEEEEETBTTEEEEEEEEEE--E--SSTT-----CCSEEEEEEEETTEEEEEEEEE------ESTTCTTSG
T ss_pred CEEEEECCCEEEEEECCCCEEEEEECCCC--C--CCCC-----CCCCEEECCCCCCCEEEEEEEE------ECCCCCCCC
T ss_conf 19999889699999899977858781578--5--4427-----9998597268998514786100------025787764
Q ss_pred CCCCCCCCCCEEE--EEEECCC--EEEEEECCCCCCCCEEEEEEEEEECCE--EEEEEEEEECCCCCEEEEE
Q ss_conf 7787743353479--9981698--899997547888565999999984990--6999999835895069862
Q T0526 80 HYLHGDGWLGEWQ--CVSHSDD--SLCLVYEHRSGVYHYRVSQAFHLTADT--LTVTLSVTNQGAETLPFGT 145 (290)
Q Consensus 80 ~~~HG~ar~~~w~--v~~~~~~--~~~l~~~~~~~P~~~~l~~~~~L~~~~--L~v~~~v~N~g~~~~p~~~ 145 (290)
.+..-..+..... ....+.+ +++|+..... ..+++.+|++..+. +.++++|+|.++++.....
T Consensus 69 ~~~~~~~~~~~~~~~~l~~~~~~~~vt~~~~~~~---g~~v~k~ytf~~d~Y~i~~~~~v~N~s~~~~~~~~ 137 (280)
T 3bs6_A 69 ANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAA---GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISS 137 (280)
T ss_dssp GGSSCCBCBCSCSEEECCTTCSEEEEEEEEECTT---CCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEEE
T ss_pred CCCCCCCEEECCCCEEECCCCCCEEEEEEEECCC---CEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCE
T ss_conf 6777743484477237548985079999998799---85999999988995789999999926888641143
No 13
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic domain, transmembrane, chaperone; 2.50A {Escherichia coli K12}
Probab=95.99 E-value=0.062 Score=28.94 Aligned_cols=125 Identities=11% Similarity=0.123 Sum_probs=61.2
Q ss_pred EEEEECCCEEEEEECCCCEEEEEEECCEEEEECCCCCCHHHCCCCC-EEEEEEEECCCCEEEECCEEEEECCCCCCCCCC
Q ss_conf 8998769849999178969999997996089358980021056673-885443330298688799799955447886677
Q T0526 3 IYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCF-PLVPFANRVSGNRFVWQGREYQLQPNVEWDAHY 81 (290)
Q Consensus 3 ~~~L~~~~~~~~i~~~Ga~i~s~~~~g~~~l~~~~~~~~~~~~~~~-~l~P~~~r~~~~~~~~~G~~~~l~~n~~~~~~~ 81 (290)
.|+|+|+.++++|+.+||.|.++..+. +- ...+ ...| .|+. .-....+.. +.--+..+......+
T Consensus 36 ~itvetd~~~~~~s~~GG~I~~~~Lk~--y~--~~~~-----~~~p~~l~~---~~~~~~~~~--~~~l~~~~~~~~~~~ 101 (330)
T 3blc_A 36 LISVKTDVLDLTINTRGGDVEQALLPA--YP--KELN-----STQPFQLLE---TSPQFIYQA--QSGLTGRDGPDNPAN 101 (330)
T ss_dssp EEEEECSSCEEEEETBTCCEEEEEEEE--EE--SSTT-----CSSEEEEEE---ECSSCEEEE--EEEEESTTCTTSGGG
T ss_pred EEEEECCCEEEEEECCCCEEEEEECCC--CC--CCCC-----CCCCEEECC---CCCCCCEEE--EEEEECCCCCCCCCC
T ss_conf 799988979999979997785866167--85--3327-----999849705---898762156--541012678775467
Q ss_pred CCCCCCCC---EEEEEEECCC--EEEEEECCCCCCCCEEEEEEEEEECCE--EEEEEEEEECCCCCEEEEE
Q ss_conf 87743353---4799981698--899997547888565999999984990--6999999835895069862
Q T0526 82 LHGDGWLG---EWQCVSHSDD--SLCLVYEHRSGVYHYRVSQAFHLTADT--LTVTLSVTNQGAETLPFGT 145 (290)
Q Consensus 82 ~HG~ar~~---~w~v~~~~~~--~~~l~~~~~~~P~~~~l~~~~~L~~~~--L~v~~~v~N~g~~~~p~~~ 145 (290)
..-..+.. .+.+. .+.+ .++|+..... .+.++.+|+|..+. +.++++|+|.|.+++....
T Consensus 102 ~~~~~~~~~~~~~~l~-~~~~~~~vtf~~~~~~---g~~v~k~ytf~~~~Y~i~~~~~v~N~s~~~~~~~~ 168 (330)
T 3blc_A 102 GPRPLYNVEKDAYVLA-EGQNELQVPMTYTDAA---GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISS 168 (330)
T ss_dssp CSCCBCBCSCSEEECC-TTCCEEEEEEEEECTT---SCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEEE
T ss_pred CCCCCEEECCCEEEEC-CCCCCEEEEEEEECCC---CEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCC
T ss_conf 7775237257705734-8996069999998899---86999999986894689999999947888651130
No 14
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=81.88 E-value=1.9 Score=19.64 Aligned_cols=58 Identities=17% Similarity=0.262 Sum_probs=37.5
Q ss_pred CCEEEEEECCCCCCCCEEEEEEEEEEC--CEEEEEEEEEECCCCCEEEEECCCCEEECCC
Q ss_conf 988999975478885659999999849--9069999998358950698623541482189
Q T0526 98 DDSLCLVYEHRSGVYHYRVSQAFHLTA--DTLTVTLSVTNQGAETLPFGTGWHPYFPLSP 155 (290)
Q Consensus 98 ~~~~~l~~~~~~~P~~~~l~~~~~L~~--~~L~v~~~v~N~g~~~~p~~~g~HpyF~~~~ 155 (290)
++.-+|.+....--..++++++|++.+ +-++...+|+|+|++++.+.-..=..+.+++
T Consensus 129 ~~~~~l~i~l~D~~~~l~v~l~y~i~~~~~vi~~~~~i~N~g~~~v~l~~~~s~~l~~~~ 188 (745)
T 3mi6_A 129 DDAQTLVVSFNDRITGLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLNRALSSQLDLPD 188 (745)
T ss_dssp CCCEEEEEEEEETTTCCEEEEEEEEEGGGTEEEEEEEEECCSSSCEEEEEEEEEEEEESC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCC
T ss_conf 985189999996798939999999978999899999999899988898504205255786
No 15
>1ejx_B Urease beta subunit; alpha-beta barrel, nickel metalloenzyme, temperature dependent structural changes, hydrolase; HET: KCX; 1.60A {Klebsiella aerogenes} SCOP: b.85.3.1 PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* 1fwe_B* 1fwf_B* 1fwg_B* 1fwh_B* ...
Probab=81.18 E-value=2 Score=19.48 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=23.0
Q ss_pred EEEEECCEEEEEEEEEECCCCCEEEEECCCCEE
Q ss_conf 999849906999999835895069862354148
Q T0526 119 AFHLTADTLTVTLSVTNQGAETLPFGTGWHPYF 151 (290)
Q Consensus 119 ~~~L~~~~L~v~~~v~N~g~~~~p~~~g~HpyF 151 (290)
.+.|..+.=+++++|+|+||+|..+ |.|--|
T Consensus 12 ~I~lN~gr~~~~l~V~N~GDRpIQV--GSH~HF 42 (101)
T 1ejx_B 12 QIALNTGRATCRVVVENHGDRPIQV--GSHYHF 42 (101)
T ss_dssp EEECSTTCCEEEEEEEECSSSCEEE--ETTSCG
T ss_pred CEEECCCCCEEEEEEEECCCCCEEE--CCCCCH
T ss_conf 7887699967899977279863587--354553
No 16
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=77.29 E-value=2.6 Score=18.72 Aligned_cols=30 Identities=27% Similarity=0.435 Sum_probs=22.3
Q ss_pred EEEECCEEEEEEEEEECCCCCEEEEECCCCEE
Q ss_conf 99849906999999835895069862354148
Q T0526 120 FHLTADTLTVTLSVTNQGAETLPFGTGWHPYF 151 (290)
Q Consensus 120 ~~L~~~~L~v~~~v~N~g~~~~p~~~g~HpyF 151 (290)
+.|..+.-+++++|+|+||+|..+ |.|--|
T Consensus 19 I~lN~gr~~~~l~V~NtGDRpIQV--GSH~HF 48 (126)
T 4ubp_B 19 IEINAGREKTTIRVSNTGDRPIQV--GSHIHF 48 (126)
T ss_dssp EETTTTSCEEEEEEEECSSSCEEE--ETTSCG
T ss_pred EEECCCCCEEEEEEEECCCCCEEE--CCCCCH
T ss_conf 887699977899977379864686--165584
No 17
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, copper, zinc, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus str}
Probab=72.42 E-value=3.5 Score=17.95 Aligned_cols=26 Identities=15% Similarity=0.491 Sum_probs=17.3
Q ss_pred EEEEEEECCEEEEEEEEEECCCCCEE
Q ss_conf 99999849906999999835895069
Q T0526 117 SQAFHLTADTLTVTLSVTNQGAETLP 142 (290)
Q Consensus 117 ~~~~~L~~~~L~v~~~v~N~g~~~~p 142 (290)
.-+|.+-+.+|+++++|||.|++|..
T Consensus 256 ~a~Y~VPGR~l~~~~~VTN~g~~~v~ 281 (382)
T 1yew_A 256 DATYRVPGRAMRMKLTITNHGNSPIR 281 (382)
T ss_dssp EEEEESSCSEEEEEEEEEECSSSCEE
T ss_pred CCEEECCCCEEEEEEEEECCCCCCEE
T ss_conf 55763478179999999748987468
No 18
>1e9y_A Urease alpha subunit; hydrolase, dodecamer, acetohydroxamic acid; HET: KCX; 3.0A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=67.83 E-value=4.3 Score=17.33 Aligned_cols=31 Identities=23% Similarity=0.374 Sum_probs=22.9
Q ss_pred EEEEECCEEEEEEEEEECCCCCEEEEECCCCEE
Q ss_conf 999849906999999835895069862354148
Q T0526 119 AFHLTADTLTVTLSVTNQGAETLPFGTGWHPYF 151 (290)
Q Consensus 119 ~~~L~~~~L~v~~~v~N~g~~~~p~~~g~HpyF 151 (290)
.+.|..+.-+++++|+|+||+|..+ |.|--|
T Consensus 117 ~I~ln~gr~~~~l~V~N~GDRPIQV--GSH~HF 147 (238)
T 1e9y_A 117 DITINEGKKAVSVKVKNVGDRPVQI--GSHFHF 147 (238)
T ss_dssp EEETTTTCCCCEEEEEECSSSCEEE--ETTSCG
T ss_pred CCCCCCCCCEEEEEEECCCCCCEEE--CCCCCH
T ss_conf 6013799866999995699875054--365424
No 19
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=64.52 E-value=5 Score=16.93 Aligned_cols=19 Identities=37% Similarity=0.473 Sum_probs=13.9
Q ss_pred EECCCCEEEEEEEEEEEEC
Q ss_conf 9789983999999999859
Q T0526 272 ALAPGESTTSEMSLRVEWL 290 (290)
Q Consensus 272 ~L~PGe~~~~~~~i~ve~~ 290 (290)
.|+|||+.+..++|..+.|
T Consensus 661 ~L~pGes~~v~~~~~~~~l 679 (721)
T 2x41_A 661 LLNPGESEEVVLEIPVRDL 679 (721)
T ss_dssp CBCTTCEEEEEEEEEGGGG
T ss_pred CCCCCCEEEEEEEECHHHE
T ss_conf 5499982899999878890
No 20
>3isy_A Bsupi, intracellular proteinase inhibitor; NP_388994.1, intracellular proteinase inhibitor (bsupi) from bacillus subtilis, structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=63.58 E-value=5.2 Score=16.82 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=27.7
Q ss_pred CEEEEEEEEEECCEEEEEEEEEECCCCCEEEEEC
Q ss_conf 6599999998499069999998358950698623
Q T0526 113 HYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTG 146 (290)
Q Consensus 113 ~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~g 146 (290)
++.+++...-.++.+.+.++++|.++++.++...
T Consensus 6 ~~~~~~~~~~~~e~v~~~ltl~N~~~~~v~l~F~ 39 (120)
T 3isy_A 6 EVVLSIDAIQEPEQIKFNMSLKNQSERAIEFQFS 39 (120)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEECSSSCEEEEES
T ss_pred EEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEC
T ss_conf 0799841002785299999999189976898977
No 21
>2cqs_A Cellobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: BGC; 2.00A {Cellvibrio gilvus} PDB: 2cqt_A*
Probab=45.99 E-value=10 Score=15.01 Aligned_cols=49 Identities=14% Similarity=0.052 Sum_probs=30.7
Q ss_pred EECCCEEEEEECCCCCCCCEEEEEEEEE--ECCEEEEEEEEEECCCCCEEEEECC
Q ss_conf 8169889999754788856599999998--4990699999983589506986235
Q T0526 95 SHSDDSLCLVYEHRSGVYHYRVSQAFHL--TADTLTVTLSVTNQGAETLPFGTGW 147 (290)
Q Consensus 95 ~~~~~~~~l~~~~~~~P~~~~l~~~~~L--~~~~L~v~~~v~N~g~~~~p~~~g~ 147 (290)
..+.+.++|+.... ..+.++++-+ +++.-..+++|+|+++++..+.+..
T Consensus 118 ~~~~~~~~f~~~~~----gi~~e~~~fV~~~~~vev~~v~l~N~s~~~r~L~l~~ 168 (842)
T 2cqs_A 118 RHGLGYSRITGERN----GLKVETLFFVPLGENAEVQKVTVTNTSDAPKTATLFS 168 (842)
T ss_dssp EECSSEEEEEEEET----TEEEEEEEECCTTCSEEEEEEEEEECSSSCEEEEEEE
T ss_pred EECCCEEEEEEEEC----CEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEE
T ss_conf 97798789999969----9999999999189998999999997979958999999
No 22
>3chx_A PMOB; membrane protein, copper, methane, beta barrel; 3.90A {Methylosinus trichosporium}
Probab=39.36 E-value=3.6 Score=17.85 Aligned_cols=24 Identities=29% Similarity=0.504 Sum_probs=13.1
Q ss_pred EEEEECCEEEEEEEEEECCCCCEE
Q ss_conf 999849906999999835895069
Q T0526 119 AFHLTADTLTVTLSVTNQGAETLP 142 (290)
Q Consensus 119 ~~~L~~~~L~v~~~v~N~g~~~~p 142 (290)
+|.+-+.+|+++++|+|.|+++..
T Consensus 264 ~Y~VPgR~l~~~~~VtN~g~~~vr 287 (392)
T 3chx_A 264 VYKVPGRELTIQVKVTNKTDEPLK 287 (392)
T ss_dssp EECSSSSEEEECCCC---------
T ss_pred EEECCCCEEEEEEEEECCCCCCEE
T ss_conf 762478179999999748987568
No 23
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=32.14 E-value=17 Score=13.64 Aligned_cols=48 Identities=4% Similarity=-0.038 Sum_probs=29.5
Q ss_pred CCCEEEEEECCCCCCCCEEEEEEEEE--ECCEEEEEEEEEECCCCCEEEEECCC
Q ss_conf 69889999754788856599999998--49906999999835895069862354
Q T0526 97 SDDSLCLVYEHRSGVYHYRVSQAFHL--TADTLTVTLSVTNQGAETLPFGTGWH 148 (290)
Q Consensus 97 ~~~~~~l~~~~~~~P~~~~l~~~~~L--~~~~L~v~~~v~N~g~~~~p~~~g~H 148 (290)
+.+..+++.... ..++++++-+ +++....+++|+|.++++..+.+..+
T Consensus 103 g~~~~~f~~~~~----gi~~e~~~fV~~~~~vev~rl~l~N~s~~~r~L~l~~y 152 (807)
T 1v7w_A 103 GLSYSKFQCDYN----GIHARKTLFVPKGEDAEIWDVVIKNTSDQVRTISAFSF 152 (807)
T ss_dssp ETTEEEEEEEET----TEEEEEEEECCTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCCEEEEEEEEC----CEEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEE
T ss_conf 698799999839----99999999986999889999999969799089999999
No 24
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10
Probab=31.14 E-value=17 Score=13.54 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=27.7
Q ss_pred EEEEECC---CEEEEEECCCCEEEEEEECCEEEEECC
Q ss_conf 8998769---849999178969999997996089358
Q T0526 3 IYTLSHG---SLKLDVSDQGGVIEGFWRDTTPLLRPG 36 (290)
Q Consensus 3 ~~~L~~~---~~~~~i~~~Ga~i~s~~~~g~~~l~~~ 36 (290)
-+.|.++ +|.+.|..-.|.|+|++++|.|+.+..
T Consensus 10 ~~viD~g~~~~l~~tv~k~~gdi~si~y~G~el~~~~ 46 (508)
T 1nkg_A 10 AYVIDTNAPNQLKFTVSRSSCDITSIIHYGTELQYSS 46 (508)
T ss_dssp EEEEECCCTTCEEEEEETTTCCEEEEEETTEECBCSS
T ss_pred EEEEECCCCCCEEEEEECCCCCEEEEEECCEEEECCC
T ss_conf 1998289875369999879986898888999844168
No 25
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=26.18 E-value=21 Score=13.00 Aligned_cols=16 Identities=13% Similarity=0.385 Sum_probs=9.5
Q ss_pred EEEEEEEECCEEEEEE
Q ss_conf 9999998499069999
Q T0526 116 VSQAFHLTADTLTVTL 131 (290)
Q Consensus 116 l~~~~~L~~~~L~v~~ 131 (290)
-+++|+|+++.|++.+
T Consensus 31 gtvtytldgndleiri 46 (85)
T 2kl8_A 31 GTVTYTLDGNDLEIRI 46 (85)
T ss_dssp CEEEEEECSSCEEEEE
T ss_pred CEEEEEECCCEEEEEE
T ss_conf 5589995497169998
No 26
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=25.30 E-value=22 Score=12.90 Aligned_cols=58 Identities=17% Similarity=0.130 Sum_probs=39.4
Q ss_pred CCCEEEEEEECCCEEEEEECC---CCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEE
Q ss_conf 353479998169889999754---78885659999999849906999999835895069862
Q T0526 87 WLGEWQCVSHSDDSLCLVYEH---RSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGT 145 (290)
Q Consensus 87 r~~~w~v~~~~~~~~~l~~~~---~~~P~~~~l~~~~~L~~~~L~v~~~v~N~g~~~~p~~~ 145 (290)
.+.+++.. ...++++|+.+- ...+.+++++-.|+++.+++.++|+++|.++....|..
T Consensus 514 ~~~~y~~~-~~~~~~~~~~~g~~~~~~~~~~~~~K~~~~~~~~~~~~y~~~~~~~~~~~f~~ 574 (659)
T 1k1x_A 514 VNQPYEYE-MIENGVKLWREGGVYAEEKIPARVEKKIELTEDGFIAKYRVLLEKPYKALFGV 574 (659)
T ss_dssp SSSCCEEE-EETTEEEEEEEEEEESSSEEEEEEEEEEEEETTEEEEEEEEEESSCCCEEEEE
T ss_pred CCCCCEEE-EECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCEEEEE
T ss_conf 46762346-41571699996761346756548999999718950899999507985201468
No 27
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=20.23 E-value=28 Score=12.27 Aligned_cols=26 Identities=15% Similarity=0.212 Sum_probs=20.1
Q ss_pred EEEEECCEEEEEEEEEECCCCCEEEE
Q ss_conf 99984990699999983589506986
Q T0526 119 AFHLTADTLTVTLSVTNQGAETLPFG 144 (290)
Q Consensus 119 ~~~L~~~~L~v~~~v~N~g~~~~p~~ 144 (290)
.+++++-++.+.++|+|..+.++|+.
T Consensus 56 ~vsl~~~tl~~~l~V~NPN~~~Lpi~ 81 (174)
T 1yyc_A 56 GVTRDGVDYHAKVSVKNPYSQSIPIC 81 (174)
T ss_dssp EECSSSEEEEEEEEEEECSSSCCBCC
T ss_pred EECCCEEEEEEEEEEECCCCCCCCCC
T ss_conf 54322069999999999798770033
Done!