Query T0532 YP_210662.1, Bacteroides fragilis nctc 9343, 506 residues
Match_columns 506
No_of_seqs 241 out of 2874
Neff 9.9
Searched_HMMs 22458
Date Fri May 21 18:07:56 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/hhm/T0532.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/hhm/T0532.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ejn_A SUSD homolog; YP_212639 100.0 0 0 617.0 32.4 466 21-506 2-472 (474)
2 3ehm_A SUSD homolog; glycan bi 100.0 0 0 567.7 33.1 470 19-506 2-523 (532)
3 3gzs_A Uncharacterized SUSD su 100.0 0 0 561.7 32.3 455 23-506 2-512 (515)
4 3cgh_A SUSD homolog; NP_812895 100.0 0 0 554.9 37.0 464 22-506 2-514 (516)
5 3fdh_A SUSD homolog; NP_810946 100.0 0 0 492.0 29.2 465 19-506 1-496 (499)
6 3iv0_A SUSD homolog; NP_809186 100.0 0 0 328.1 24.8 402 25-484 7-475 (481)
7 3ihv_A SUSD homolog; NP_813570 100.0 0 0 327.4 25.0 430 28-483 10-529 (535)
8 3i4g_A SUSD-like carbohydrate 100.0 0 0 315.7 27.3 377 33-448 19-463 (528)
9 3jq1_A SUSD superfamily protei 100.0 0 0 320.0 21.1 399 30-483 5-475 (481)
10 3ckc_A SUSD; TPR repeat, carbo 100.0 0 0 310.6 24.6 416 19-483 1-520 (527)
11 3lew_A SUSD-like carbohydrate 100.0 0 0 303.5 27.8 388 30-485 14-485 (495)
12 3jq0_A SUSD superfamily protei 100.0 0 0 302.9 28.0 428 31-484 5-487 (493)
13 3jys_A SUSD superfamily protei 100.0 0 0 307.1 23.2 356 82-484 85-494 (499)
14 3kez_A Putative sugar binding 100.0 0 0 297.1 30.4 379 32-484 17-454 (461)
15 3hdx_A SUSD homolog, SUSD supe 100.0 0 0 306.9 20.7 408 29-484 5-472 (478)
16 3l22_A SUSD superfamily protei 100.0 0 0 302.9 18.0 396 29-484 12-440 (441)
17 2fo7_A Synthetic consensus TPR 43.3 11 0.00048 14.6 2.4 27 347-373 104-130 (136)
18 2f2f_C CDT C, cytolethal diste 40.3 6.8 0.0003 15.7 0.9 26 1-30 1-26 (186)
19 1na0_A Designed protein CTPR3; 34.6 15 0.00066 13.8 3.0 30 346-375 9-38 (125)
20 1na3_A Designed protein CTPR2; 30.2 18 0.00079 13.3 3.5 31 345-375 8-38 (91)
21 1hxi_A PEX5, peroxisome target 28.4 19 0.00085 13.2 3.3 31 345-375 50-80 (121)
22 3ma5_A Tetratricopeptide repea 27.4 20 0.00088 13.1 3.8 31 345-375 6-36 (100)
23 2kat_A Uncharacterized protein 24.7 22 0.00099 12.8 3.1 30 346-375 19-48 (115)
24 2kc7_A BFR218_protein; tetratr 24.2 23 0.001 12.7 3.1 29 346-374 35-63 (99)
25 2w5v_A Alkaline phosphatase; p 22.0 15 0.00065 13.8 0.0 20 1-22 1-20 (375)
26 2jep_A Xyloglucanase; family 5 20.6 16 0.00072 13.6 0.0 12 1-12 2-13 (395)
27 2jpu_A ORF C02003 protein; sol 20.0 28 0.0012 12.2 3.8 37 342-378 3-39 (129)
28 2ho1_A Type 4 fimbrial biogene 20.0 28 0.0012 12.2 4.7 29 346-374 175-203 (252)
No 1
>3ejn_A SUSD homolog; YP_212639.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.50A {Bacteroides fragilis nctc 9343} SCOP: a.118.8.6
Probab=100.00 E-value=0 Score=616.99 Aligned_cols=466 Identities=33% Similarity=0.610 Sum_probs=371.1
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 73112578878676346889999999986320012200234353311125665556536654441778999999999999
Q T0532 21 DKFDEINTDPDATTKVTSSLLATGLLLDITSSSASKSFIYDELLAKQMAWGESMEDYQYNVFGRSGFGGYTTLINAQKMV 100 (506)
Q Consensus 21 ~dfld~n~dp~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~Y~~i~~~n~~i 100 (506)
.||+|+|+||+.+++++++++|++++.+......... .....+..........+..+...|..+|..|.+++.+|
T Consensus 2 ~Df~diN~nPn~~t~~~~~~ll~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~i~~~~~~i 76 (474)
T 3ejn_A 2 GNLEEMNIDPDNATQTHPKLLLTQICMNAFKRGTDGM-----YATKKVIQADGESADQYYKWTRGSFGYYDNLRNVQKMG 76 (474)
T ss_dssp --------------CCCTHHHHHHHHHHHHCCCSGGG-----TTTTSEEESSSCCTTTTTCCCBCCCTHHHHHHHHHHHH
T ss_pred CCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH-----HHHHEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8902226898965766999999999999997110143-----25641575002454000004577999999999999999
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-CC
Q ss_conf 731566799999999999999999999861898642255776-4445678788899999999999999984455566-55
Q T0532 101 ESVSDDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGE-LGLVRPKYNTQKEVMNFILSDLETAYELFSTAKD-FD 178 (506)
Q Consensus 101 ~~~~~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~-~~~~~p~~~s~~evy~~I~~dL~~A~~~L~~~~~-~~ 178 (506)
+.+++.++++++|||+|||||+||.|+|+||||||+++..+. .....|+|++++|||++|++||++|+++|+.... ..
T Consensus 77 ~~~~~~~~~~~~a~A~~lRA~~y~~L~d~yGdvPy~~~~~~~~~~~~~p~~ds~~eVY~~I~~dL~~Ai~~L~~~~~~~~ 156 (474)
T 3ejn_A 77 EEAERVNAPVYTALTKFFRAYYFYELTLRFGDIPYSQALKGEKEEIYTPEYDAQEDVFAGILQELREADEILANDASVID 156 (474)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHSSBCCTTTTC------CCCCCBCHHHHHHHHHHHHHHHHHHHHTCCCCCT
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 86322457999999999999999999998689710002556765335877784999999999999999985643423444
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 54224775899999999999999998624646899999999999874388424622012552015776201011333466
Q T0532 179 GDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASGSLMESNEDNLQMKYADKANTVYPFHNTNTKH 258 (506)
Q Consensus 179 ~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (506)
.+.+++|++.||+++|++|++|++|++.++........++.....+..++++.+.++++.+.+.......++.+. ..
T Consensus 157 ~d~~~~g~~~kw~~~A~sL~~r~~l~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~ 233 (474)
T 3ejn_A 157 GDIIYNGNSTQWRKLINSFRLKVLMTLSNHTTVGNINIASEFKNIATNSPLMNSLADNGQLVYLDQQGNRYPQFN---AQ 233 (474)
T ss_dssp TCTTTTTCHHHHHHHHHHHHHHHHHHTTTCSEETTEEHHHHHHHHHHHSCCCCSGGGCEEECCCSSTTCSCTTTT---CC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEE---CC
T ss_conf 331247609999999999999999985042336689999999998651575245034456631357787551242---35
Q ss_pred CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55420048999875136885025556416655456644566543145546655554555432333345676557787888
Q T0532 259 AGYAMLSTMLIDKFKATGDIRMFYYAKPAKAKLNEGVTADSWDAYIGTDPSLPFEQIEKAYATEQYSGFNARYTDYPSGE 338 (506)
Q Consensus 259 ~~~~~~s~~~~~~~~~~~DpR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (506)
+....++..+++.+.+.+|||+..++.+................+.+.+.+..............+...+......+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~d~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (474)
T 3ejn_A 234 WSGYYMDDTFIQRMRERRDPRLFIFSAQTNKGKTEGKPIDDFSSYEGGDPAAPYSDAIIKVSEGTISPINDRFRTDPIVE 313 (474)
T ss_dssp CTTEEEBHHHHHHHHHTTCTTHHHHBCCCHHHHHTTCCTTCGGGCCCBCTTSCSCCHHHHHC---CCCBCGGGTSCSSCC
T ss_pred CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 67632126899874267897500113446665445764554322005775665666432356664046665446688888
Q ss_pred CEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCC--CCCH
Q ss_conf 52115268999999999985789823799999999999997302331000013455554456776652144335--7760
Q T0532 339 PVVRLGYAEQNFILAEAAVRGWISGDASAYYKKAIRAHMEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQL--SGEK 416 (506)
Q Consensus 339 ~~~~~r~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 416 (506)
|+++||||||+||+|||++|+|+.++|+++|++||++||++|++...+...+ .....+..++..+.+.+ +++.
T Consensus 314 ~~~i~ryAEv~Li~AEA~~r~g~~~~A~~~y~~gi~as~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 388 (474)
T 3ejn_A 314 PTMLMGYAELQQILAEAVVRGWISGNAQTYYEKGIRASFSFYETHAKDYAGY-----LNENAVAQYLKEPLVDFTQASGT 388 (474)
T ss_dssp CEEEECHHHHHHHHHHHHHTTSSCSCHHHHHHHHHHHHHHHHHHHSGGGGGG-----SSHHHHHHHTTSTTTCGGGCCSH
T ss_pred CEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH-----CCCCCHHHHHCCCCCCCCCCCCH
T ss_conf 8787529999999999998449976699999999999999846554310110-----24431255430654544556686
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCHHHHHHHHHHHC-CCC
Q ss_conf 8899999999999963687114665110127870034567777777775315631772034416789999999742-888
Q T0532 417 EADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLPINPATNRNTMNDRLPMRWMYPKSESDYNLEHQNEALERQF-GGV 495 (506)
Q Consensus 417 ~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgyP~l~~~~~~~~~~~~~~~p~R~~yp~~e~~~N~~~~~~a~~~~~-~g~ 495 (506)
+++||+|++|||||+|+++++|+|+|+||||||.|+.+. .+.+|+||+||++|++.|++||++||++|. ||+
T Consensus 389 ~~~l~~I~~qk~ia~~~~g~~e~w~d~RRtg~P~~~~~~-------~~~~p~R~~Yp~~E~~~N~~n~~~a~~~~~~~g~ 461 (474)
T 3ejn_A 389 EEQIERIIMQKYLVTFYQGNWDSFYEQLRTGYPDFRRPA-------GTEIPKRWMYPQGEYDNNGTNVETAITRQFGAGN 461 (474)
T ss_dssp HHHHHHHHHHHHTTCSSSSTTHHHHHHHHHCCSCCCCCT-------TCCCCCCCBCCHHHHHHSHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC-------CCCCEEEEECCHHHHHCCHHHHHHHHHHHHCCCC
T ss_conf 999999999999997589735189999970998774888-------8876355315822765389999999998745898
Q ss_pred CCCCCCCCCCC
Q ss_conf 66666445349
Q T0532 496 DDVNKLMWILQ 506 (506)
Q Consensus 496 d~~~~~~Ww~~ 506 (506)
|.++|||||.|
T Consensus 462 d~~~~~~wWdk 472 (474)
T 3ejn_A 462 DKINQATWWQK 472 (474)
T ss_dssp CCTTCCCGGGS
T ss_pred CCCCCCCCEEC
T ss_conf 64578486327
No 2
>3ehm_A SUSD homolog; glycan binding, mucin O-glycan binding, tetratrico-peptide repeat, sugar binding protein; 2.00A {Bacteroides thetaiotaomicron} PDB: 3ehn_A*
Probab=100.00 E-value=0 Score=567.72 Aligned_cols=470 Identities=17% Similarity=0.253 Sum_probs=324.1
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-----HHHCCCCC------------HHHHHHHHHHCCCCCC---CCCCC
Q ss_conf 6773112578878676346889999999986-----32001220------------0234353311125665---55653
Q T0532 19 SCDKFDEINTDPDATTKVTSSLLATGLLLDI-----TSSSASKS------------FIYDELLAKQMAWGES---MEDYQ 78 (506)
Q Consensus 19 SC~dfld~n~dp~~~t~~~~~~~~~~~~~~~-----~~~~~~~~------------~~~~~~~~~~~~~~~~---~~~~~ 78 (506)
|| ||+|||+||+.++++++..++.+.+... ........ .+..+.++++++.... ....+
T Consensus 2 ss-Df~diNtnPn~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 80 (532)
T 3ehm_A 2 AS-DYEAVNTNPYGVSDGELGPLKYGARFMNMQQRVIPIGSPSLTTGPGNDLQNTDLISSGNYIGYFGNNNNWGFNNEAN 80 (532)
T ss_dssp ---------------------CHHHHHHHHHHHHHHTTCBCGGGTTHHHHHHHHHTTTTHHHHTTSEEESCCGGGCSGGG
T ss_pred CC-CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
T ss_conf 86-50320689785782221146678899999976302444211456530478887763363000014566656566650
Q ss_pred CC----CCCCHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66----54441778999999999999731----56679999999999999999999986189864225577644456787
Q T0532 79 YN----VFGRSGFGGYTTLINAQKMVESV----SDDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELGLVRPKY 150 (506)
Q Consensus 79 ~~----~~~~~w~~~Y~~i~~~n~~i~~~----~~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~~~~~p~~ 150 (506)
++ .....|..+|..|.+++..|..+ ++.++++++|||||||||+||.|+|+||+|||+++... ...|+|
T Consensus 81 y~~~~~~~~~~W~~~Y~~i~~~~~~i~~~~~~~~~~~~~~~~a~A~~lRA~~y~~L~d~fG~vP~~~a~~~---~~~p~~ 157 (532)
T 3ehm_A 81 WNFTDSRMNYAYQNFYSQIFLPWNEIYEIAKDSDSPSEQAILEIANIVRNIAWLRATDVFGPIAYNSAGDG---SIAPKF 157 (532)
T ss_dssp TCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCBCCTTTTSC---CSSCCC
T ss_pred EECCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC---CCCCCC
T ss_conf 22457321133999999999999999998752562568999999999999999999986497105441134---678887
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 88899999999999999984455566---555422477589999999999999999862464689999999999987438
Q T0532 151 NTQKEVMNFILSDLETAYELFSTAKD---FDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASG 227 (506)
Q Consensus 151 ~s~~evy~~I~~dL~~A~~~L~~~~~---~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (506)
++++|||++|++||++|+++|+.... ...|.+++|++.||+++|++|++|++|+++++....+....+.+. ....+
T Consensus 158 ds~~eVY~~I~~dL~eA~~~L~~~~~~~~~~~d~~~~G~~~kw~~~An~l~lr~~~~~~~~~~~~A~~~~~~~~-~~~~~ 236 (532)
T 3ehm_A 158 DSQEVVYRSMLADLSKSVELLNTISYSVMAQYDLIYNGNVQNWVKLANSLMLRIVVRVHFIDETLAKEYITKAL-DPKNG 236 (532)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHTTCCSCCSGGGCTTTTTCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-CGGGT
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCC
T ss_conf 75899999999999999986212555554431054066399999999899999998763110468899999998-50136
Q ss_pred CCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 84246220125520157762010113334665542004899987513688502555641665545664456654314554
Q T0532 228 SLMESNEDNLQMKYADKANTVYPFHNTNTKHAGYAMLSTMLIDKFKATGDIRMFYYAKPAKAKLNEGVTADSWDAYIGTD 307 (506)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~DpR~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 307 (506)
+++.++++++.+.+.+.....++.+. ...+++...++..+++.|.+.+|||+..++.+........... .+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~l~~~~Dpr~~~~~~~~~~~~~~~~~~----~~~~~~ 311 (532)
T 3ehm_A 237 GVIEDISSEAKIKSSDKMPLLNSMLA-SVNEYNETRMGATIWGYLDGYKDPRLSAYFTEGTYGSGSWAQT----GYFPVA 311 (532)
T ss_dssp CCCCSGGGCEEECCCSSSCCBCTTHH-HHTTSCCEEEBHHHHHHHHHTTCTHHHHHBCCEEESSTTSCEE----ECCCBC
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCEE-EECCCCCCEECHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCC----CCCCCC
T ss_conf 74046156543046778875333000-1148776133525666531679966756202155777741024----740135
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 66555545554323333456765577878885211526899999999998578982379999999999999730233100
Q T0532 308 PSLPFEQIEKAYATEQYSGFNARYTDYPSGEPVVRLGYAEQNFILAEAAVRGWISGDASAYYKKAIRAHMEFIASNTPDE 387 (506)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~s~~~~~~~~~~~ 387 (506)
........ ...+..............|+++||||||+||+|||++|+|..++|+++|++||++||++|++...+.
T Consensus 312 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~ryAEv~Li~AEA~~r~~~~~~A~~~y~~gi~as~~~~~~~~~~~ 386 (532)
T 3ehm_A 312 PTNSKSKS-----ETSYSAKFASRPKVDSNSPLYWFRASETYFLKAEAALYNLIGGDPKTFYEQGINISFQEQGVSGVAT 386 (532)
T ss_dssp TTCCSCCC-----CSTTSGGGSCCBCCCTTCCEEEECHHHHHHHHHHHHHTTSSSSCHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred CCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 56775655-----5544334566545678887511128877677889987089866599999999998898735420777
Q ss_pred HHCCCCCCCCHHHH---------HHHHHC------CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCC
Q ss_conf 00134555544567---------766521------443357760889999999999996368711466511012787003
Q T0532 388 EVYHHGHPITEEAI---------AAFLET------PAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLP 452 (506)
Q Consensus 388 ~~~~~~~~~~~~~~---------~~~~~~------~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgyP~l~ 452 (506)
+......+...... ...... ......++.+++||+|++|||||+|+ +++|+|+|+||||||.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~-~~~E~w~d~RRtg~P~~~ 465 (532)
T 3ehm_A 387 YLSGTGKPTGLTGSNYKYGTYNHDLSIGNTSPKWDDYTGNLSKQEEQLQKIITQKYLALYP-NAVEAWTEYRRTGFPYLM 465 (532)
T ss_dssp HHTCCCCCCCBCTTTCCSSSCCBCTTTTCCCSSTTCCCCSSCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHCCSCCC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC-CHHHHHHHHHCCCCCCCC
T ss_conf 8623677655555310001111210010001332100245656799999999999999589-702389999800897655
Q ss_pred CCCCC------CCCCCCCCCCEEEECCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 45677------7777777531563177203441678999999974288866666445349
Q T0532 453 INPAT------NRNTMNDRLPMRWMYPKSESDYNLEHQNEALERQFGGVDDVNKLMWILQ 506 (506)
Q Consensus 453 ~~~~~------~~~~~~~~~p~R~~yp~~e~~~N~~~~~~a~~~~~~g~d~~~~~~Ww~~ 506 (506)
+.... ..+...+.+|+||+||++|++.||++++ |+.+ +||+|.+++||||.|
T Consensus 466 ~~~~~~~~~~~~~~~~~~~~p~R~~Yp~~e~~~N~~~~~-~~~~-~~g~d~~~~~~wWdk 523 (532)
T 3ehm_A 466 KPMDEAAPGRIGASIEDCRVPERFRFAPTAYNSNPNMAE-IPTL-LGGGDIGATKLWWVR 523 (532)
T ss_dssp CCSCTTHHHHTTCCTTTCSSCSCCCCCTTHHHHCGGGGG-HHHH-HTSCSSTTSCCTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCHHHHH-HHHH-HCCCCCCCCCCCCCC
T ss_conf 664457866556776788623784067878862988999-9998-479974676060118
No 3
>3gzs_A Uncharacterized SUSD superfamily protein; structural genomics, joint center for structural genomics, JCSG; 2.09A {Bacteroides fragilis nctc 9343}
Probab=100.00 E-value=0 Score=561.69 Aligned_cols=455 Identities=20% Similarity=0.287 Sum_probs=327.9
Q ss_pred CCCCCCCCCCCCCCCHHH--H-----HHHHHHHHHHHCCCC------------CHHHHHHHHHHCCCCCCC-----CCCC
Q ss_conf 112578878676346889--9-----999999863200122------------002343533111256655-----5653
Q T0532 23 FDEINTDPDATTKVTSSL--L-----ATGLLLDITSSSASK------------SFIYDELLAKQMAWGESM-----EDYQ 78 (506)
Q Consensus 23 fld~n~dp~~~t~~~~~~--~-----~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-----~~~~ 78 (506)
|+|||+||+.++++++.. + ++.++..+....... ..+.+++++++++..... ...+
T Consensus 2 ~ediN~nPn~~t~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~ 81 (515)
T 3gzs_A 2 SEDINRNPLLPTKEDEKMDGVIYGAYLPNLEKSVIPIGTASESTEPVNRYQIGVNLAGDAWAGYMSPRDNKFNGSKNFTN 81 (515)
T ss_dssp -------------------CGGGGTHHHHHHHTTTTCBCTTTCSHHHHHHHHHTTTTHHHHTTSEEESSCCHHHHCSGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 63357997748720003432023679999998654301443355641178998876505320000577777666654311
Q ss_pred CC----CCCCHHHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66----54441778999999999999731566---799999999999999999999861898642255776444567878
Q T0532 79 YN----VFGRSGFGGYTTLINAQKMVESVSDD---NVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELGLVRPKYN 151 (506)
Q Consensus 79 ~~----~~~~~w~~~Y~~i~~~n~~i~~~~~~---~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~~~~~p~~~ 151 (506)
|+ .....|...|..|..++..|..+.++ .+.+++|+|+|||||+|+.|||+||||||+|+.++ ...|+||
T Consensus 82 y~~~~~~~~~~w~~~Y~~~~~~~~~i~~~~~~~~~~~~~~~a~A~i~rA~~~~~ltd~yGdiPysea~~~---~~~p~yd 158 (515)
T 3gzs_A 82 YFMYENWVNYVYSFMVTDVYSPWMQIKRISQDEGTRNDEIYALAQIIKIAALHRTTDMFGPIPYSQVGKG---SFKVAYD 158 (515)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHHHHHHSSEECTTTTSS---CSSCCEE
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC---CCCCCCC
T ss_conf 4634631002489999999999999999860443223889999999999999999988088122101258---8788877
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCC------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 8899999999999999984455566------5554224775899999999999999998624646899999999999874
Q T0532 152 TQKEVMNFILSDLETAYELFSTAKD------FDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVA 225 (506)
Q Consensus 152 s~~evy~~I~~dL~~A~~~L~~~~~------~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (506)
++++||++|++||++|++.|+.... ...|.+|+|++.||+++|++|+||++||++++.++.+.+..+ ..+..
T Consensus 159 s~~eVY~~I~~dLd~Ai~~L~~~~~~~~~~~~~~d~~y~Gd~~kW~k~ansL~lR~~l~~~~~~~~~a~~~~~--~~~~~ 236 (515)
T 3gzs_A 159 SQESVYRSFLKELEEAVQTLDDYSNKSKEVLPAFDIVYNGDVNKWMRFANSLMLRLAIRVRFADAGLAKEYAE--KAVKH 236 (515)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTCSBSSTTTCTTTTTBHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHH--HHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH--HHHHC
T ss_conf 6999999999999999997653134444320123343288899999999999999998740003467999999--98741
Q ss_pred CCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 38842462201255201577620101133346655420048999875136885025556416655456644566543145
Q T0532 226 SGSLMESNEDNLQMKYADKANTVYPFHNTNTKHAGYAMLSTMLIDKFKATGDIRMFYYAKPAKAKLNEGVTADSWDAYIG 305 (506)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~DpR~~~~~~~~~~~~~~~~~~~~~~~~~g 305 (506)
..+++.++++++.+.+.......++++... ..++..+++..+++.|.+.+|||+..++.+.... .+
T Consensus 237 ~~~~~~s~~~~~~~~~~~~~~~~n~~~~~~-~~~~~~~~s~~~~~~l~~~~DPR~~~~~~~~~~~-------------~~ 302 (515)
T 3gzs_A 237 PAGLINSKELAAQMGKGAGLQMKNPLKVIN-EEYNDTRMGATIYSYLAGYNDARAAVYFVKNNGF-------------KA 302 (515)
T ss_dssp TTCCCCSGGGCEEESEETTEECBCHHHHHH-HTSCCEEEBHHHHHHHHHTTCTTHHHHBCCTTCC-------------CC
T ss_pred CCCCCCCHHHHHHHCCCCCCCCCCCHHHHH-CCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC-------------CC
T ss_conf 236567367677625687767567177760-5552177899999986268996643310357886-------------55
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 5466555545554323333456765577878885211526899999999998578-982379999999999999730233
Q T0532 306 TDPSLPFEQIEKAYATEQYSGFNARYTDYPSGEPVVRLGYAEQNFILAEAAVRGW-ISGDASAYYKKAIRAHMEFIASNT 384 (506)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g-~~~~A~~~y~~gi~~s~~~~~~~~ 384 (506)
...+.... ...+..+. ........|.++||+||++||+|||++|+| ..|+|+++|++||++||++|+...
T Consensus 303 ~~~~~~~~-------~~~~~~~s--~~~~~~~~~~~~~~~aE~~fi~AEa~~r~~~~~g~a~~~y~~gi~as~~~~~~~~ 373 (515)
T 3gzs_A 303 VRCGIAKS-------GDAYNGFT--RPNVHEDDPLYWMKASEVCFLKAEGALAGFDMGGSAGDFYNAGIRMSFSENGLDN 373 (515)
T ss_dssp BCSSCCCC-------TTTTTTSC--CBCCCTTCCEEEECHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHHTTCCH
T ss_pred EECCCCCC-------CCCCCCCC--CCCCCCCCCCCEEEHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCH
T ss_conf 11012577-------66567777--7665456764022133431200799970699876589999999999999856121
Q ss_pred CCHHHCCCCCCCC---------HHHHHHHHH--CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCCC
Q ss_conf 1000013455554---------456776652--14433577608899999999999963687114665110127870034
Q T0532 385 PDEEVYHHGHPIT---------EEAIAAFLE--TPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLPI 453 (506)
Q Consensus 385 ~~~~~~~~~~~~~---------~~~~~~~~~--~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgyP~l~~ 453 (506)
.+...+....... ......+.. .+.+..+++.+++||+|++|||||+|++ ++|+|+|+||||||.+.+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~le~I~~Qk~ialf~~-g~E~w~d~RRtgyP~~~~ 452 (515)
T 3gzs_A 374 SSAETYLKDSTRKPANYTDTSNGELSANAPSSITIRWENGATEEEKLERIITQKYLAIFPN-GQEAWTEWRRTGYPRQIV 452 (515)
T ss_dssp HHHHHHHTCCSCCCCCBCCSSCGGGCBCCSCCCCSSCCTTSCHHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHCCSCCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHCCCCCCC
T ss_conf 4589987404435311345312100012222221234567786999999999999997686-266899998518986567
Q ss_pred CCCCCC-------CCCCCCCCEEEECCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 567777-------77777531563177203441678999999974288866666445349
Q T0532 454 NPATNR-------NTMNDRLPMRWMYPKSESDYNLEHQNEALERQFGGVDDVNKLMWILQ 506 (506)
Q Consensus 454 ~~~~~~-------~~~~~~~p~R~~yp~~e~~~N~~~~~~a~~~~~~g~d~~~~~~Ww~~ 506 (506)
.+.... +.....+|+||+||++|++.|++|+++||++++||+|.++|||||.|
T Consensus 453 ~~~~~~~~~~~~~~~~~~~~p~R~~YP~~E~~~N~~n~~~a~~~~~~g~d~~~~~~wWdk 512 (515)
T 3gzs_A 453 VAENKTNSAVLIGNGYDLGGVRRLPYPRTEYEQNGENLHNAISQYLGGVDNAATKVWWDK 512 (515)
T ss_dssp CSCCCCSSCCCCCCSSSSCSCCCCCCCHHHHHHSHHHHHHHHHHHSTTCCSTTSCCTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 766767765545677777860573066768750999999999986089975678781208
No 4
>3cgh_A SUSD homolog; NP_812895.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.118.8.6
Probab=100.00 E-value=0 Score=554.86 Aligned_cols=464 Identities=19% Similarity=0.270 Sum_probs=324.3
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHHCCCCCH--------HHHHHHHHHCCCCCCCCC---CCCCCCCCHH---
Q ss_conf 31125788786763468899999-99986320012200--------234353311125665556---5366544417---
Q T0532 22 KFDEINTDPDATTKVTSSLLATG-LLLDITSSSASKSF--------IYDELLAKQMAWGESMED---YQYNVFGRSG--- 86 (506)
Q Consensus 22 dfld~n~dp~~~t~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~~w--- 86 (506)
||+|+|+||+.+++++++.++.+ ++..+......... +..+.+++++........ .+++ ....|
T Consensus 2 Df~diN~nPn~~t~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (516)
T 3cgh_A 2 NYENINSNPYEAPDLSADGYALGSAMNNLAGCVVSPDVNTAQFTDCLLGGPLGGYFADSNAGFTETISNFN-PKDDWSRV 80 (516)
T ss_dssp --------CCCCCCTTSSHHHHHHHHHHHHTTTSCSSHHHHHHHHTTTHHHHTTSEEECCTTCCSCTTTTC-CCHHHHTH
T ss_pred CHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCEEE-ECCCHHHH
T ss_conf 86452789797786673157899999999986207530238999998776540110035566566544012-14723666
Q ss_pred ----HHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf ----7899999-99999997315667999999999999999999998618986422557764445678788899999999
Q T0532 87 ----FGGYTTL-INAQKMVESVSDDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELGLVRPKYNTQKEVMNFIL 161 (506)
Q Consensus 87 ----~~~Y~~i-~~~n~~i~~~~~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~~~~~p~~~s~~evy~~I~ 161 (506)
...|..+ ..+..+++..+++++++++|||+|||||+||.|+|+||||||+++..+ +...|+|+++++||++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~A~~lRA~~y~~L~d~fGdvP~~~a~~~--~~~~p~~ds~~~VY~~I~ 158 (516)
T 3cgh_A 81 FLKSDKIIPTLYSNLTQVKLVSQNTNDPVPYAIAQVIKVAAMHRVTDAFGPIPYSQIGAN--GEIATPYDSQEVTYNTFF 158 (516)
T ss_dssp HHHCTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSSBCCTTCCTT--CCCCSCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCHHHHHHHHH
T ss_conf 788899999999999999976324540899999999999999999998588312203667--666888888999999999
Q ss_pred HHHHHHHHHCCCCCC----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHE
Q ss_conf 999999984455566----5554224775899999999999999998624646899999999999874388424622012
Q T0532 162 SDLETAYELFSTAKD----FDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASGSLMESNEDNL 237 (506)
Q Consensus 162 ~dL~~A~~~L~~~~~----~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (506)
+||++|+..|+.... ...+.+++|++.||+++|++|++|++|++.++....+.+.++.+ .....+++++++++++
T Consensus 159 ~dL~eAi~~L~~~~~~~~~~~~d~~~~G~~~~w~~~a~sl~~r~~l~~~~~~~~~a~~~~~~~-~~~~~~~~~~s~~~~~ 237 (516)
T 3cgh_A 159 DELNAAIATLNENSNEQLVPTADYIYKGDVKKWIRFANSLKLRLAIRIAYANPVKAQQMAEEA-VNPANGGVIESNADNA 237 (516)
T ss_dssp HHHHHHHHHHHHTTTCBCCGGGCTTTTTBHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHH-HCGGGTCCCCSGGGCE
T ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCC
T ss_conf 999999986210476433442034307629999999999999999986403679999999998-7521477611333110
Q ss_pred EEEECCCCCCCCCC------------CCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 55201577620101------------133346655420048999875136885025556416655456644566543145
Q T0532 238 QMKYADKANTVYPF------------HNTNTKHAGYAMLSTMLIDKFKATGDIRMFYYAKPAKAKLNEGVTADSWDAYIG 305 (506)
Q Consensus 238 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~s~~~~~~~~~~~DpR~~~~~~~~~~~~~~~~~~~~~~~~~g 305 (506)
.+.+.....+.... .......++...++..+++.+.+.+|||+..++.+...... .+.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dpr~~~~~~~~~~~~~---------~~~g 308 (516)
T 3cgh_A 238 TWNYFETSQNPIYVATRYNQVQTSDHGGVPCLTGGDTHAAADIICYMNGYKDNRREKFFTKSEWAGQ---------DYVG 308 (516)
T ss_dssp EECCCTTSCCHHHHHHHTTCCCGGGTTTSCCCSCSSEEEBHHHHHHHHHTTCTTHHHHBCCCCSTTC---------SCCC
T ss_pred EECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCC---------CEEC
T ss_conf 0024568788521100234445666433301366653110579998504689306544034666665---------1003
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 5466555545554323333456765577878885211526899999999998578--98237999999999999973023
Q T0532 306 TDPSLPFEQIEKAYATEQYSGFNARYTDYPSGEPVVRLGYAEQNFILAEAAVRGW--ISGDASAYYKKAIRAHMEFIASN 383 (506)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g--~~~~A~~~y~~gi~~s~~~~~~~ 383 (506)
...+....... .....++ ........|+++||||||+||+|||++|+| .+++|+++|++||++||++|++.
T Consensus 309 ~~~~~~~~~~~--~~~~~~s-----~~~~~~~~~~~i~ryAEv~Li~AEA~~r~g~~~~~~A~~~y~~gi~~s~~~~~~~ 381 (516)
T 3cgh_A 309 MRRGIVIPELK--TTGHKYS-----GVNIAPTSPLYWMNAAEVAFLRAEGQAVFNFSMGGTAESFYNQGIRLSFEQWGAD 381 (516)
T ss_dssp BCSSSCCCCTT--TTGGGSC-----CBCCCTTCCEEEECHHHHHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCCCCC--CCCCCCC-----CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 43566676545--4466566-----5555777861352288888889999997389877169999999999999984612
Q ss_pred CCCHHHCCCCC-------CCCHHHHHHHHHCCCCC--CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCCCC
Q ss_conf 31000013455-------55445677665214433--5776088999999999999636871146651101278700345
Q T0532 384 TPDEEVYHHGH-------PITEEAIAAFLETPAIQ--LSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLPIN 454 (506)
Q Consensus 384 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgyP~l~~~ 454 (506)
........... +.....+..+.....+. .+++.+++||+|++|||||+|++ ++|+|+|+||||||+|.+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~qk~ia~~~~-~~e~w~d~RRtg~P~~~~~ 460 (516)
T 3cgh_A 382 GVEDYLKDDVNKPTAYTDPAGTNTYQNALSNITIKWNDSADKEEKQERIIVQKWIANWQL-GNEAWADFRRTGYPKLIPV 460 (516)
T ss_dssp CHHHHHTCCSCCCCCBCCTTSSSCBCSCSCCCCSSCCTTSCHHHHHHHHHHHHHHHTTTC-HHHHHHHHHHHCCSCCCCC
T ss_pred CHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-HHHHHHHHHCCCCCCCCCC
T ss_conf 177886530256311367322115666543202234567887999999999999995787-1658999981299755578
Q ss_pred CCCC--CCCCCCCCCEEEECCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 6777--777777531563177203441678999999974288866666445349
Q T0532 455 PATN--RNTMNDRLPMRWMYPKSESDYNLEHQNEALERQFGGVDDVNKLMWILQ 506 (506)
Q Consensus 455 ~~~~--~~~~~~~~p~R~~yp~~e~~~N~~~~~~a~~~~~~g~d~~~~~~Ww~~ 506 (506)
+... .....+.+|+||+||++|++.||+||++|++++++|+|.++|||||.|
T Consensus 461 ~~~~~~~~~~~~~~p~R~~yp~~e~~~N~~n~~~a~~~~~~g~d~~~~~vwWd~ 514 (516)
T 3cgh_A 461 KENKSGGVVDSEKGARRMPYPLDEFVSNKANVEYAIANYLHGADNMATDVWWAS 514 (516)
T ss_dssp SSCCSTTSSCTTTCCCSCCCCTTHHHHSHHHHHHHHHHTSCSCSSTTSCCTTCC
T ss_pred CCCCCCCCCCCCCCCEEEECCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 768887756788861685148317651999999999985189975688587428
No 5
>3fdh_A SUSD homolog; NP_810946.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: PG4; 1.75A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=0 Score=492.05 Aligned_cols=465 Identities=21% Similarity=0.228 Sum_probs=322.1
Q ss_pred CCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHCCCCCC---------CCCCCCCCCCCHHH
Q ss_conf 677-311257887867634688999999998632001220-0234353311125665---------55653665444177
Q T0532 19 SCD-KFDEINTDPDATTKVTSSLLATGLLLDITSSSASKS-FIYDELLAKQMAWGES---------MEDYQYNVFGRSGF 87 (506)
Q Consensus 19 SC~-dfld~n~dp~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~w~ 87 (506)
+|+ +|+|+|+||+.++++++++++++++.........+. ..+...+.+++..... ......+.+...|.
T Consensus 1 g~~d~~d~in~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 80 (499)
T 3fdh_A 1 GSEDTMDRINKDHDHTTSVASRFILADVITSTAFSNASGDINTYASSYIEYEVGVDNQLYYAEVRENEPSSSSTFNNSWN 80 (499)
T ss_dssp -----------------CCCHHHHHHHHHHHHHHTTTSSHHHHHHHHHTTSEEECSHHHHHHHTTSSGGGCTTTTHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCHHH
T ss_conf 98765464789989646579999999999997776328618889999999985666521023430134567775426599
Q ss_pred HHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC----CCCCCCCCCHHHHHHH
Q ss_conf 89999999999997315----667999999999999999999998618986422557764----4456787888999999
Q T0532 88 GGYTTLINAQKMVESVS----DDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGEL----GLVRPKYNTQKEVMNF 159 (506)
Q Consensus 88 ~~Y~~i~~~n~~i~~~~----~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~----~~~~p~~~s~~evy~~ 159 (506)
.+|..|.+||.+|+.++ ++++++++|||+|||||+||+|+++||+||++++..... ....|+|++++|||++
T Consensus 81 ~~Y~~I~~~N~~i~~~~~~~~~~~~~~~~geA~~lRA~~y~~L~~~fG~vP~~~~~~~~~~~~~~~~~~~~~s~~evy~~ 160 (499)
T 3fdh_A 81 GIYSSLKNARIIIDQCGEGGRDHGNDVTRGMAEVMAAYNCALIADFFGDAPCSQAALVDEKGSPVYMTPKMDTQQEIYTQ 160 (499)
T ss_dssp HHHHHHHHHHHHHHHTSTTSTTTTCHHHHHHHHHHHHHHHHHHHHHHCSEECTTCCC----------CCCEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999999766335565799999999999999999999985677432234566677742247787849999999
Q ss_pred HHHHHHHHHHHCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf 99999999984455566---555422477589999999999999999862464689999999999987438842462201
Q T0532 160 ILSDLETAYELFSTAKD---FDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASGSLMESNEDN 236 (506)
Q Consensus 160 I~~dL~~A~~~L~~~~~---~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (506)
|++||++|+++|+.... ...+.+++|++.||+++|++|++|+++++.++............ ......+.++.++
T Consensus 161 I~~dL~~A~~~L~~~~~~~~~~~~~~~~g~~~k~~~~a~~l~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 237 (499)
T 3fdh_A 161 IISYLDDAIANLQKEDLADVTEQDFLYAGDADKWLKFAYGLKARYTMRLINRSSNKSADYEKVL---DYVSKSFTSADDQ 237 (499)
T ss_dssp HHHHHHHHHHHTTSCCSSCCTTTCTTTTTCHHHHHHHHHHHHHHHHHHTGGGCSCHHHHHHHHH---HHHHTSCSSGGGS
T ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH---HHHHCCCCCCHHH
T ss_conf 9999999998532244434320455625309999999999999998540224056789999998---6441144661567
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 25520157762010113334665542004899987513688502555641665545664456654314554665555455
Q T0532 237 LQMKYADKANTVYPFHNTNTKHAGYAMLSTMLIDKFKATGDIRMFYYAKPAKAKLNEGVTADSWDAYIGTDPSLPFEQIE 316 (506)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~DpR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (506)
+.+.+....+. .+++. ....++....+..+++.|.+.+|||+..++....................+...+..
T Consensus 238 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~DpR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 310 (499)
T 3fdh_A 238 AAFDIYDSNNI-NPFYG-FYNSRAGFGASTSLGTKLLAYNDPRANRAFFTPIVDKKRSQVAANDPSLVPAPNGSP----- 310 (499)
T ss_dssp EEECCCBTTBC-CHHHH-HHHHHCCEEEBHHHHHHHHHHTCGGGGTSEECCCBTTBEEBCCTTCGGGCCBCTTCC-----
T ss_pred HHHHHCCCCCC-CCCCE-ECCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-----
T ss_conf 77752156776-65300-004677633351688875136996610155234556655533467763124677776-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHC------
Q ss_conf 54323333456765577878885211526899999999998578982379999999999999730233100001------
Q T0532 317 KAYATEQYSGFNARYTDYPSGEPVVRLGYAEQNFILAEAAVRGWISGDASAYYKKAIRAHMEFIASNTPDEEVY------ 390 (506)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~s~~~~~~~~~~~~~~------ 390 (506)
..................|.++||+|||+|++|||++|+|. +|+++|.+||++++..+..........
T Consensus 311 ----~~~~~~~~~~~~~~~~~~~~~~~r~aev~l~~AEa~~r~g~--~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 384 (499)
T 3fdh_A 311 ----DQSTSKYGISAFVYAKTAPTLLMSYHELMFLKAEALCRLNR--DAEDALKEAVVAGLLNAENSISIAIKELGSGLN 384 (499)
T ss_dssp ----CSCSSSSCEEGGGGCTTCCEEEECHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEE
T ss_pred ----CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf ----66544456554445677764311299998899999987389--789999999999999987543457887511346
Q ss_pred -CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC--HHHHHHCHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -3455554456776652144335776088999999999999636871--1466511012787003456777777777531
Q T0532 391 -HHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHP--YDVYYDYRRTGYPVLPINPATNRNTMNDRLP 467 (506)
Q Consensus 391 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~--~e~w~d~RRtgyP~l~~~~~~~~~~~~~~~p 467 (506)
.....+.......+.... ...++.+++||+|++|||||||+++. +|+|+|+||+|+|.....+... ....+.+|
T Consensus 385 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~le~I~~er~iel~~eg~~~~e~w~D~rR~g~~~~~~~~~~~-~~~~~~~~ 461 (499)
T 3fdh_A 385 TNSSEVITETSAGKYFDDV--VKAKYAANPLQETMIQKYLAMWGASGEATETYNDFRRMKGLNENFITLTN-PNNSSKFP 461 (499)
T ss_dssp CCSCCCCCHHHHHHHHHHT--HHHHHHHSHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHTTCCCSCCCC-TTHHHHCC
T ss_pred CCCHHHHHHHHHHHHCCCC--CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCE
T ss_conf 5410123343433310222--23465699999999999999673745531169898613997213666667-87887452
Q ss_pred EEEECCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 563177203441678999999974288866666445349
Q T0532 468 MRWMYPKSESDYNLEHQNEALERQFGGVDDVNKLMWILQ 506 (506)
Q Consensus 468 ~R~~yp~~e~~~N~~~~~~a~~~~~~g~d~~~~~~Ww~~ 506 (506)
+|||||++|++.||+++|.. ++|+|.+++||||++
T Consensus 462 ~r~piP~~E~~~Npn~~q~~----g~g~~~~~~~~ww~~ 496 (499)
T 3fdh_A 462 LRYPYGNSDTAANPEVKAAY----GNGDYVYSEPVWWAG 496 (499)
T ss_dssp SSCCCCHHHHHHCHHHHHHH----TTSGGGGTCCCGGGT
T ss_pred EEEECCHHHHHHCHHHHHCC----CCCCCCCCCCCCCCC
T ss_conf 89854899997698767066----799975677101289
No 6
>3iv0_A SUSD homolog; NP_809186.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=0 Score=328.05 Aligned_cols=402 Identities=12% Similarity=0.078 Sum_probs=231.5
Q ss_pred CCCCCCCCC--CCCCHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHCCCCC-------------------CCCCCCCC
Q ss_conf 257887867--634688999999998632001220---023435331112566-------------------55565366
Q T0532 25 EINTDPDAT--TKVTSSLLATGLLLDITSSSASKS---FIYDELLAKQMAWGE-------------------SMEDYQYN 80 (506)
Q Consensus 25 d~n~dp~~~--t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------------------~~~~~~~~ 80 (506)
++..|.... ++.+.+..++++|..+........ ..+++..++...... .......+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (481)
T 3iv0_A 7 KLSGDDFWAQGNETNAEAFLLSIYNSFRNATMSQRPFLTYSGDMRCAPITAYSTGDKYVAYLANNDMGELRNTYPDDARG 86 (481)
T ss_dssp -----CTTTTCCHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHTTTTCCEEESSTTCHHHHHHHTTCHHHHHHHSSSSTTT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 48830155679999999999999999872056787510003422456300357776431146773376875267688775
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 54441778999999999999731------566799999999999999999999861898642255776444567878889
Q T0532 81 VFGRSGFGGYTTLINAQKMVESV------SDDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELGLVRPKYNTQK 154 (506)
Q Consensus 81 ~~~~~w~~~Y~~i~~~n~~i~~~------~~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~~~~~p~~~s~~ 154 (506)
.+...|..+|..|.+||.+|+++ +++++++++|||+|||||+||.|+++||+|||.+... +...|+|++++
T Consensus 87 ~~~~~W~~~Y~~I~~aN~~i~~i~~~~~~~~~~~~~~~aeA~~lRA~~y~~L~~~~G~vP~~~~~~---~~~~~~~~s~~ 163 (481)
T 3iv0_A 87 GLIMQWDVFYTAIQDANILLAEIDKVPGMDELKRSRFKAEAIFMRSLSYFFIVRAFGDVPYYTNAY---NEAPLPRTNMV 163 (481)
T ss_dssp TTTTCCHHHHHHHHHHHHHHHHGGGSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSEECCCCC-------CCCEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC---CCCCCCCCCHH
T ss_conf 176789999999999999998330589999999999999999999999999998809920774677---65577878899
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH----HHHHHHC
Q ss_conf 999999999999998445556655----54224775899999999999999998624646899999999----9998743
Q T0532 155 EVMNFILSDLETAYELFSTAKDFD----GDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKER----FARIVAS 226 (506)
Q Consensus 155 evy~~I~~dL~~A~~~L~~~~~~~----~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~----~~~~~~~ 226 (506)
|||++|++||++|++.|+...... ......|+++|| +|++|++|++|++..+....+....+. ...+...
T Consensus 164 evy~~I~~dL~~Ai~~l~~~~~~~~~~~~~~~~~gr~~k~--aa~al~ar~~l~~~~~d~~~a~~~~~~a~~~~~~~~~~ 241 (481)
T 3iv0_A 164 IVLQNCLADLQPLLDDDPGAEVLPWSYSSYSSKGIRASRG--SVIALMMHINLWLVQFDAQNKEQYYRNVVSLGEELERN 241 (481)
T ss_dssp HHHHHHHHHHHHHHHTCTTSCSSCSCCSSTTTTTTSCCHH--HHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEHH--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999861712121676566563003602099--99999999999971755656899999999999999745
Q ss_pred CCCCCCCHHHEEEEECCCCCCCCCCCCCCCC-----------------------CC-CCCCHHHHHHHHHH-CCCCCEEE
Q ss_conf 8842462201255201577620101133346-----------------------65-54200489998751-36885025
Q T0532 227 GSLMESNEDNLQMKYADKANTVYPFHNTNTK-----------------------HA-GYAMLSTMLIDKFK-ATGDIRMF 281 (506)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~-~~~~~s~~~~~~~~-~~~DpR~~ 281 (506)
.+.................+.+..+...... .. .....+......+. ..+|+|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~r~~ 321 (481)
T 3iv0_A 242 NGAYSLLDINRSSVIFAGGSDEGLFEIAQNINFNEIFMMNAKFSDNVSYSCLNKSMPLFCYSGDYLMTLFPMYEDDARKE 321 (481)
T ss_dssp TTSCCCCCGGGHHHHHHSCCTTEEEEECCBGGGTBCCCGGGCHHHHSCCGGGTCSSCSEEECHHHHHHHSCTTSCCHHHH
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHE
T ss_conf 78533677036667643588520145531467665455565456776656557777755557830555400237873111
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCEEHHHHHHHHHHHHHHHHHC
Q ss_conf 556416655456644566543145546655554555432333345676--557787888521152689999999999857
Q T0532 282 YYAKPAKAKLNEGVTADSWDAYIGTDPSLPFEQIEKAYATEQYSGFNA--RYTDYPSGEPVVRLGYAEQNFILAEAAVRG 359 (506)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~ 359 (506)
.++.+....... ....++...++..... .........++++||+|||+||+|||++|+
T Consensus 322 ~~~~~~~~~~~~--------------------~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~R~aEv~L~~AEA~~~~ 381 (481)
T 3iv0_A 322 LWFDEKIYSTSV--------------------SSSAPKEIKKFWNIDTYGNGTITSNSGNQIVFRYAGALLLYAEALAAL 381 (481)
T ss_dssp HHBCTTTTCCCC--------------------CTTSCCCBCTTCBCEEETTTEEESBCSCEEEEEHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCC--------------------CCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
T ss_conf 452464335777--------------------656675102305655567888767757744654999999999999984
Q ss_pred CC-CCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 89-82379999999999999730233100001345555445677665214433577608899999999999963687114
Q T0532 360 WI-SGDASAYYKKAIRAHMEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYD 438 (506)
Q Consensus 360 g~-~~~A~~~y~~gi~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e 438 (506)
|. .++|++++++ ||... + .+ ...++.++.++.|++|||+||++|+.
T Consensus 382 g~~~~~A~~~ln~-vR~ra--------------------------~--~~--~~~~~~~~~~~~I~~Er~~El~~Eg~-- 428 (481)
T 3iv0_A 382 GTNDTKACELLNR-VRNRA--------------------------H--AS--EINTSGSELMDAIFWERCRELIGEGH-- 428 (481)
T ss_dssp TSCHHHHHHHHHH-HHHHT--------------------------T--CC--CCCCCHHHHHHHHHHHHHHHTTTSSC--
T ss_pred CCCHHHHHHHHHH-HHHHC--------------------------C--CC--CCCCCHHHHHHHHHHHHHHHHHCCCH--
T ss_conf 9898999999999-99970--------------------------9--99--78878999999999999999982504--
Q ss_pred HHHHCHHCCCCCCCCCCCCCCC-CCCCCCCEEEECCCCHHHCCHHHH
Q ss_conf 6651101278700345677777-777753156317720344167899
Q T0532 439 VYYDYRRTGYPVLPINPATNRN-TMNDRLPMRWMYPKSESDYNLEHQ 484 (506)
Q Consensus 439 ~w~d~RRtgyP~l~~~~~~~~~-~~~~~~p~R~~yp~~e~~~N~~~~ 484 (506)
+|+|+||+|.|........... ........++|+|++|++.||+..
T Consensus 429 r~~Dl~R~g~~~~~~~~~~~~~~~~~~~~~~~~PiP~~ei~~N~~l~ 475 (481)
T 3iv0_A 429 YYYDLVRTGKVYNRNYCMNPMTRTNFNVGAWTWPIHRNALKNNTQIG 475 (481)
T ss_dssp HHHHHHHHTGGGCTTTCSSCCCHHHHHTTTTSCCCCTHHHHHCTTCC
T ss_pred HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCC
T ss_conf 99999972978874344676565666888679558899995488997
No 7
>3ihv_A SUSD homolog; NP_813570.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=0 Score=327.37 Aligned_cols=430 Identities=15% Similarity=0.077 Sum_probs=240.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHCCCCCCC-------CCC----CCCCCCCHHHHHHHHHH
Q ss_conf 8878676346889999999986320012--2002343533111256655-------565----36654441778999999
Q T0532 28 TDPDATTKVTSSLLATGLLLDITSSSAS--KSFIYDELLAKQMAWGESM-------EDY----QYNVFGRSGFGGYTTLI 94 (506)
Q Consensus 28 ~dp~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~----~~~~~~~~w~~~Y~~i~ 94 (506)
++....+..+.+..++++|..+...... ......+..++.+..+... ..+ ..+.+.+.|..+|..|.
T Consensus 10 ~~~~~~~~~~~~~~l~g~Y~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~Y~~I~ 89 (535)
T 3ihv_A 10 KKNYMNNAEEAKDVLLGVYRTNTLDAMYGYYLSILFNLGTDISQVEGSGNENFRIIPTNSFPTTQSEVQQTWAALYTGIY 89 (535)
T ss_dssp HHTSCCSHHHHHHHHHHHHHGGGSCCCCCTTTTTGGGCSSSSEEESSSSCCGGGTTTTTCCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 60362499999999999998520358566227776125764155488884688898717758886389999999999999
Q ss_pred HHHHHHHHCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9999997315----------66799999999999999999999861898642255-776444567878889999999999
Q T0532 95 NAQKMVESVS----------DDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEAL-QGELGLVRPKYNTQKEVMNFILSD 163 (506)
Q Consensus 95 ~~n~~i~~~~----------~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~-~~~~~~~~p~~~s~~evy~~I~~d 163 (506)
+||.+|+.++ +..+++++|||+|||||+||.|+++||+|||.+.. ........++|+++++||++|++|
T Consensus 90 ~aN~~i~~i~~~~~~~~~~~~~~~~~~~gea~~lRA~~y~~L~~~yG~vP~~~~~~~~~~~~~~~~r~t~~evy~~I~~d 169 (535)
T 3ihv_A 90 RANDFLERISNKIGSYTTTDKKLATLYIAEARALRGMFYFELVRRFGNVVLMTSTQMSNQNPATYVQSAPEKVYEYIEDD 169 (535)
T ss_dssp HHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCSHHHHTSCGGGCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999984542566666669999999999999999999999998629904981577777642235779899999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHCC--CCCCCCHHH--
Q ss_conf 9999984455566555422477589999999999999999862464---689999999999987438--842462201--
Q T0532 164 LETAYELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKKE---SDADLKVKERFARIVASG--SLMESNEDN-- 236 (506)
Q Consensus 164 L~~A~~~L~~~~~~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~-- 236 (506)
|++|++.||...+........|+++|| +|++|++|++|.+.... ......+++...+++.++ .++.+..+.
T Consensus 170 L~~A~~~Lp~~~~~~~~~~~~gr~tk~--aA~al~arv~L~~~~~~~~~~~~~~~A~~~~~~vi~~~~y~L~~~y~~~f~ 247 (535)
T 3ihv_A 170 LLYACDILPYATDDQYRESNDYRFSKG--AALGLLTKVYATWAGYPVKDESKWEAAAKTARILVESGKHGLLKDYEQLWK 247 (535)
T ss_dssp HHHHHHHCCCTTTCCSSSCCTTSCCHH--HHHHHHHHHHHHHHSTTTCCTTHHHHHHHHHHHHHHTTSCCCCSCHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCHHHH--HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 999997387555666674335720899--999999999998235655663899999999999997589727677999987
Q ss_pred -------------EEEEECCCCCCCC--CCC-----CC-----CCCCC-----CCCCHHHHHHHHHHCCCCCEEEEEEEC
Q ss_conf -------------2552015776201--011-----33-----34665-----542004899987513688502555641
Q T0532 237 -------------LQMKYADKANTVY--PFH-----NT-----NTKHA-----GYAMLSTMLIDKFKATGDIRMFYYAKP 286 (506)
Q Consensus 237 -------------~~~~~~~~~~~~~--~~~-----~~-----~~~~~-----~~~~~s~~~~~~~~~~~DpR~~~~~~~ 286 (506)
+.+.+........ ... .. ....+ .................|+|....+.+
T Consensus 248 ~~~~~~~~~~E~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~~~ 327 (535)
T 3ihv_A 248 NTCNGTWDPTESLIEISFYSPTVSGNSDPVGRIGKWNGVKTTAIAGVRGSCAANVKVVHTFVLDWREDVSDIRRDLSIAN 327 (535)
T ss_dssp HHHTTCCCTTTEEEEECCCCSCCCSSSCCCBCTTTTTSCCBCCBTTTBCCBCCCEEECHHHHHHHHTSTTCTHHHHHEES
T ss_pred HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 64136779840688876025666777664444244467666544577777678587887665404888776445642124
Q ss_pred CCCCCCCC---CCCCCC-C---CCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHH
Q ss_conf 66554566---445665-4---314554665----555455543233334567655778788852115268999999999
Q T0532 287 AKAKLNEG---VTADSW-D---AYIGTDPSL----PFEQIEKAYATEQYSGFNARYTDYPSGEPVVRLGYAEQNFILAEA 355 (506)
Q Consensus 287 ~~~~~~~~---~~~~~~-~---~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~AEv~ll~AEA 355 (506)
........ ...... . ......... .......++...++..............++++||+||||||+|||
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~aEv~L~~AEA 407 (535)
T 3ihv_A 328 YQYTDTKKSLWVAGASDTDESAAEKDADPTKAQKNKQNYTPAKWDIQKYVTTNSFINNDKSNVNWYFLRYADVLLLYAEA 407 (535)
T ss_dssp EEECSSCEEETTCCTTCCHHHHHHHHHCTTSSHHHHTTCEECTTCHHHHCCSCCCCCSSCBCCCEEEEEHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHH
T ss_conf 42347764246514666555543135665445555666554330355436777666888787874785089999999999
Q ss_pred HHHCC--CCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 98578--9823799999999999997302331000013455554456776652144335776088999999999999636
Q T0532 356 AVRGW--ISGDASAYYKKAIRAHMEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFM 433 (506)
Q Consensus 356 ~~r~g--~~~~A~~~y~~gi~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~ 433 (506)
++|++ +...|.+++++ ||... +..... ..........+.+..++.|+.||++||++
T Consensus 408 ~~~l~~g~~~~A~~~ln~-vR~Ra---~~~~~~------------------~~~~~~~~~~~~~~~~~~I~~ER~~El~~ 465 (535)
T 3ihv_A 408 LNEWKHGPDAEAYNAINA-VRRRG---YGNPSN------------------TSACDLPQGLDETSFREAVRKERSYELSF 465 (535)
T ss_dssp HHHHHTSCCHHHHHHHHH-HHHHH---TTCCSC------------------CTTTSCCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCCHHHHHHHHHH-HHHHC---CCCCCC------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 998549988999999999-99971---898654------------------55444457789999999999999999977
Q ss_pred CCCHHHHHHCHHCCCCCCCC----------CCCCCC-C-C----CCCCCCEEEECCCCHHHCCHHH
Q ss_conf 87114665110127870034----------567777-7-7----7775315631772034416789
Q T0532 434 QHPYDVYYDYRRTGYPVLPI----------NPATNR-N-T----MNDRLPMRWMYPKSESDYNLEH 483 (506)
Q Consensus 434 ~~~~e~w~d~RRtgyP~l~~----------~~~~~~-~-~----~~~~~p~R~~yp~~e~~~N~~~ 483 (506)
|++ +|+|+||+|.+.... ...... + . ....--..+|+|++|++.||+.
T Consensus 466 Eg~--R~~Dl~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PIP~~ei~~Np~l 529 (535)
T 3ihv_A 466 EGH--RRQDLIRWGIYYKTVQATAKELGYWWEGTGSPNYSVATYTEEGKHELFPIPQRDMDLCIQF 529 (535)
T ss_dssp SSC--HHHHHHHTTCHHHHHHHHHHHHHHHCCSSSCCCCTHHHHCCTTTTTSCCCCHHHHHHCTTC
T ss_pred CCC--HHHHHHHCCCHHHHHHHCCCCCCEECCCCCCCCCCCEECCCCCCEEEECCCHHHHHHCCCC
T ss_conf 685--6999986295898865205666401145566554310023577527818889999238999
No 8
>3i4g_A SUSD-like carbohydrate binding protein BF1063; YP_210668.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=100.00 E-value=0 Score=315.74 Aligned_cols=377 Identities=14% Similarity=0.103 Sum_probs=210.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCC---------HHHHHHHHHHCCCCCCC-----------CCCCCCCCCCHHHHHHHH
Q ss_conf 7634688999999998632001220---------02343533111256655-----------565366544417789999
Q T0532 33 TTKVTSSLLATGLLLDITSSSASKS---------FIYDELLAKQMAWGESM-----------EDYQYNVFGRSGFGGYTT 92 (506)
Q Consensus 33 ~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~w~~~Y~~ 92 (506)
.+..+.+..++++|..+........ ....+..++........ ...........|..+|..
T Consensus 19 ~t~~~~~~~l~g~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~Y~~ 98 (528)
T 3i4g_A 19 NSESNAELALTSLYRGSLTDGVEYNPSDWWSYHGMIMMEHLSDNAFDRRGENNPFFKISSGNLTADNAFIKRYWETSYKR 98 (528)
T ss_dssp GCHHHHHHHHHHHHHTTCCSBCCSSCSSTTSTTTTGGGGGGSTTEEETTCTTSHHHHHHHTCCCTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 69999999999999987633655577653333301113223666540578762778986486078860588899999999
Q ss_pred HHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999999997315----6679999999999999999999986189864225577644456787888999999999999999
Q T0532 93 LINAQKMVESVS----DDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELGLVRPKYNTQKEVMNFILSDLETAY 168 (506)
Q Consensus 93 i~~~n~~i~~~~----~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~~~~~p~~~s~~evy~~I~~dL~~A~ 168 (506)
|.+||.+|+.++ ++++++++|||+|||||+||.|+++||+||+.+......+...++|+|++|||++|++||++|+
T Consensus 99 I~~aN~~I~~i~~~~~~~~k~~~~gea~~lRA~~yf~L~~~fG~vP~~~~~~~~~~~~~~~r~t~~evy~~I~~DL~~A~ 178 (528)
T 3i4g_A 99 IGYCNRFLVGIQNSSESEKKTRMIAEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQADILKWCVTEFTAAA 178 (528)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHTCSBCCCCSCCCHHHHTTCCCBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999816469988999999999999999999999998499746446778642013688999999999999899999
Q ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC-CC-C-------------
Q ss_conf 84455566555422477589999999999999999862464689999999999987438842-46-2-------------
Q T0532 169 ELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASGSLM-ES-N------------- 233 (506)
Q Consensus 169 ~~L~~~~~~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~------------- 233 (506)
++||........ ..|+++|| +|.+|++|++|.+.++.. +.... .+++...+.. .. .
T Consensus 179 ~~Lp~~~~~~~~--~~gr~tk~--aa~allar~~l~~~~~~~-a~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 249 (528)
T 3i4g_A 179 ADLPRFSAIPAG--EAGRACKQ--AALAFLGRTCMLQKDWKS-GAKAF----HDIMELGDNAINANYQELFYPSTGTSNK 249 (528)
T ss_dssp HHSCCGGGCCGG--GTTSCCHH--HHHHHHHHHHHHHTCHHH-HHHHH----HHHHHHCCCCCCSCSGGGGSTTTTTSSS
T ss_pred HHCCCCCCCCCC--CCCHHHHH--HHHHHHHHHHHCCCCHHH-HHHHH----HHHHHHCCCCCCCCHHHHHCCCCCCCCC
T ss_conf 856556666623--05668899--999999999850122999-99999----9988742555565277762332367873
Q ss_pred HHHEEEEECCCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHH--------------------CCCCCEEEEEEECCCCC
Q ss_conf 2012552015776201---011333466554200489998751--------------------36885025556416655
Q T0532 234 EDNLQMKYADKANTVY---PFHNTNTKHAGYAMLSTMLIDKFK--------------------ATGDIRMFYYAKPAKAK 290 (506)
Q Consensus 234 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~--------------------~~~DpR~~~~~~~~~~~ 290 (506)
+..+...+........ ........+++...++..+++.+. ..+|||+...+......
T Consensus 250 E~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~r~~~t~~~~~~~ 329 (528)
T 3i4g_A 250 ENIFYIQYLENYLGTGLPQHALSAKDGGWSLVNPAADLYESYEFKDGTPFSYDDPRYDPSNLGKDRDPRLDYTIYYNGAI 329 (528)
T ss_dssp SEEEEEEECTTSSCBCHHHHHSCGGGTCCCCEEECHHHHTTSCBTTSCCCCTTSTTCCTTCTTTTBCHHHHHHEEETTCE
T ss_pred HHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCE
T ss_conf 11312340257665542013334578875654662567763024688404567754332223334565321388647824
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 4566--44566543145546655554555432333345676557-78788852115268999999999985789823799
Q T0532 291 LNEG--VTADSWDAYIGTDPSLPFEQIEKAYATEQYSGFNARYT-DYPSGEPVVRLGYAEQNFILAEAAVRGWISGDASA 367 (506)
Q Consensus 291 ~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~AEv~ll~AEA~~r~g~~~~A~~ 367 (506)
.... .......................++...|+........ ......++++||+||||||+|||++|.|...++..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~i~R~aE~yL~~AEA~~~~g~~~~~~~ 409 (528)
T 3i4g_A 330 FMGTEYKMSPDYSAAKKEKLDYTSEASRTGFMMRKYFEESTPINDVQSANGLTPVIRYAEVLLGYLECLVEDNQTITQGI 409 (528)
T ss_dssp ETTEECCCBTTSCGGGTCBCSSSSSSCSSSEEECTTCCTTSCCSCTTSBCEEEEEEEHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 21764212566454556666656666766514762467777777766667753787446899999999998189944799
Q ss_pred H---HHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCH
Q ss_conf 9---9999999999730233100001345555445677665214433577608899999999999963687114665110
Q T0532 368 Y---YKKAIRAHMEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYR 444 (506)
Q Consensus 368 ~---y~~gi~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~R 444 (506)
+ +++ ||.- +....+. ....+.+..++.|+.||++||++|++ +|+|+|
T Consensus 410 a~~~ln~-vR~R--------------------------a~~~~~~-~~~~t~~~~~~~I~~ER~~El~~EG~--R~~Dl~ 459 (528)
T 3i4g_A 410 LDETINA-VRGR--------------------------ASVNMPP-VTEVTPAKLREIVRHERRIELAMEGI--RYWDIM 459 (528)
T ss_dssp HHHTHHH-HHTC--------------------------TTTCCCC-CCCCCHHHHHHHHHHHHHHHTTTSSC--HHHHHH
T ss_pred HHHHHHH-HHHH--------------------------CCCCCCC-CCCCCHHHHHHHHHHHHHHHHHCCCC--HHHHHH
T ss_conf 9999999-9986--------------------------4899877-66579999999999999999876787--599997
Q ss_pred HCCC
Q ss_conf 1278
Q T0532 445 RTGY 448 (506)
Q Consensus 445 Rtgy 448 (506)
|+|.
T Consensus 460 R~g~ 463 (528)
T 3i4g_A 460 RWGI 463 (528)
T ss_dssp HHTC
T ss_pred HCCC
T ss_conf 4580
No 9
>3jq1_A SUSD superfamily protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=0 Score=320.04 Aligned_cols=399 Identities=16% Similarity=0.149 Sum_probs=232.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCH-----HHHHHHHHHCCCCCC----------CCCCCCCCCCCHHHHHHHHHH
Q ss_conf 78676346889999999986320012200-----234353311125665----------556536654441778999999
Q T0532 30 PDATTKVTSSLLATGLLLDITSSSASKSF-----IYDELLAKQMAWGES----------MEDYQYNVFGRSGFGGYTTLI 94 (506)
Q Consensus 30 p~~~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~----------~~~~~~~~~~~~w~~~Y~~i~ 94 (506)
....++.+.+..++++|..+......... ......++....... ......+.....|..+|..|.
T Consensus 5 ~~~~t~~~~~~~l~g~Y~~l~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~Y~~I~ 84 (481)
T 3jq1_A 5 TFWKDETDFNLALTSCYTPLKNALNGGYYGTRGVMLRIARADEVDFRNDISDVYTVNRFTNSNTNSLTQGMFYQFYNALY 84 (481)
T ss_dssp CCCCSHHHHHHHHHHTTHHHHCSSSCCTTSHHHHHHHHTTSSSEEECSSSHHHHHHHHTCCCTTCHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 23359999999999999987623457744302566522466644047880378898637548875148889999999999
Q ss_pred HHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999731-------5667999999999999999999998618986422557764445678788899999999999999
Q T0532 95 NAQKMVESV-------SDDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELGLVRPKYNTQKEVMNFILSDLETA 167 (506)
Q Consensus 95 ~~n~~i~~~-------~~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~~~~~p~~~s~~evy~~I~~dL~~A 167 (506)
+||.+|+.+ +++++++++|||+|||||+||.|+++||+||+............++|+|++|||++|++||++|
T Consensus 85 ~aN~~i~~i~~~~~~~~~~~k~~~~gea~flRA~~Yf~L~~~yG~vP~~~~~~~~~~~~~~~r~t~~ev~~~I~~DL~~A 164 (481)
T 3jq1_A 85 RTNSIMQKLEEKKEQFSTDFQNSVKGECLFIRGFYLFQLAKEFKDAPLRLTASQSPSTFPLAKSSQADIWAQAKEDLKTA 164 (481)
T ss_dssp HHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHSSEECCCCCCSSCCCSCCCEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999983440687789999999999999999999999999708970786246763336668798999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC---CCCCCCHHHEEEEECCC
Q ss_conf 984455566555422477589999999999999999862464689999999999987438---84246220125520157
Q T0532 168 YELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASG---SLMESNEDNLQMKYADK 244 (506)
Q Consensus 168 ~~~L~~~~~~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 244 (506)
+++|+.... .|+++|| +|.+|++|++|...++.. +++...+++.+. .++....+.+.......
T Consensus 165 ~~~l~~~~~-------~gr~tk~--aa~al~arvyL~~~~~~~-----A~~~a~~vi~~~~~~~L~~~~~~~f~~~~~~~ 230 (481)
T 3jq1_A 165 ASLLPITNK-------IGKPTQG--AAYAALGKIYVYEENWQE-----AINVLEPLTQNPYTYKLVEDFNWNFDDTHENN 230 (481)
T ss_dssp HHHSCSSCS-------TTSCCHH--HHHHHHHHHHHHTTCHHH-----HHHHHGGGGSTTCCCCCCSSGGGGGSSTTTTC
T ss_pred HHCCCCCCC-------CCCCCHH--HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 855975423-------6831399--999999999872024699-----99999999853555323332787644430156
Q ss_pred CCCCC-----------C------------------CCCCCCCCCCCCCHHHHHHHHHHCCC------CCEEEEEEECCCC
Q ss_conf 76201-----------0------------------11333466554200489998751368------8502555641665
Q T0532 245 ANTVY-----------P------------------FHNTNTKHAGYAMLSTMLIDKFKATG------DIRMFYYAKPAKA 289 (506)
Q Consensus 245 ~~~~~-----------~------------------~~~~~~~~~~~~~~s~~~~~~~~~~~------DpR~~~~~~~~~~ 289 (506)
.+..+ . .......++....++..+++.+...+ |+|+...+.....
T Consensus 231 ~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~~~~~~ 310 (481)
T 3jq1_A 231 AESIFELLIEDVGGTDLWGDGENINSTQSNTRPKEYAAAEVGGWYEANPTQQIMDIFWKEKDKDGNFDYRARCSVAWDYE 310 (481)
T ss_dssp TTEEEEECTTCC-----C----------CCCHHHHHSCGGGTCCCCEEECHHHHHHHHSSBCTTSSBCHHHHHHEECSST
T ss_pred HHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCC
T ss_conf 20110134215787544577654113445666654566566875566772899988762377545645442313674377
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 5456644566543145546-655554555432333345676---557787888521152689999999999857898237
Q T0532 290 KLNEGVTADSWDAYIGTDP-SLPFEQIEKAYATEQYSGFNA---RYTDYPSGEPVVRLGYAEQNFILAEAAVRGWISGDA 365 (506)
Q Consensus 290 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g~~~~A 365 (506)
.. .+.+... ..........+...++..... .........++++||+||||||+|||++|+|...+|
T Consensus 311 ~~----------~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~R~aE~~L~~AEA~~~~g~~~~A 380 (481)
T 3jq1_A 311 GC----------TYYQRPFREVFAQDKWKTYWILKYQNWKTQKDEPAPPKSFINERAIRYADVLLMLAEAYMNKGALDTS 380 (481)
T ss_dssp TC----------EETTEEHHHHSCGGGTTCCEECTTSCTTTCSSCCSSCSSCCCEEEEEHHHHHHHHHHHHHHHTCHHHH
T ss_pred CC----------CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHH
T ss_conf 85----------12477665434567753202441367666777777877766604642888999999999853995889
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHH
Q ss_conf 99999999999997302331000013455554456776652144335776088999999999999636871146651101
Q T0532 366 SAYYKKAIRAHMEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRR 445 (506)
Q Consensus 366 ~~~y~~gi~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RR 445 (506)
.+++|+ ||.-. ..+......+.+..++.|+.||++||++|+. +|+|+||
T Consensus 381 ~~~lN~-vR~Ra----------------------------~~~~~~~~~~~~~~~~~I~~ER~~El~~Eg~--R~~Dl~R 429 (481)
T 3jq1_A 381 IGYINQ-IRRRA----------------------------NLNDYSGPITKEGVFEDLVHQRAIEFFVEGE--RFYDLRR 429 (481)
T ss_dssp HHHHHH-HHHHT----------------------------TCCCCCSCSSHHHHHHHHHHHHHHHTTTTTC--HHHHHHH
T ss_pred HHHHHH-HHHHC----------------------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--HHHHHHC
T ss_conf 999999-99743----------------------------8997877448999999999999999981675--8999960
Q ss_pred CCCCCCCCCCCCC------CCCCCCCCCE--EEECCCCHHHCCHHH
Q ss_conf 2787003456777------7777775315--631772034416789
Q T0532 446 TGYPVLPINPATN------RNTMNDRLPM--RWMYPKSESDYNLEH 483 (506)
Q Consensus 446 tgyP~l~~~~~~~------~~~~~~~~p~--R~~yp~~e~~~N~~~ 483 (506)
+|...-....... ........++ -+|+|++|++.||+.
T Consensus 430 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PIP~~ei~~Np~l 475 (481)
T 3jq1_A 430 WGLLEQTLKTCDDTRYKNYQTGKSDNINKFNYFPIPAKELDTNPLC 475 (481)
T ss_dssp HTCHHHHHHTTCHHHHHHHHTTEETTEEGGGSCCCCHHHHHHCTTC
T ss_pred CCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCC
T ss_conf 4818998630267664454235656677417957889999429998
No 10
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar binding protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=100.00 E-value=0 Score=310.64 Aligned_cols=416 Identities=12% Similarity=0.109 Sum_probs=224.2
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC--------------------HHHHHHHHHHCCCC--CCC--
Q ss_conf 677311257887867634688999999998632001220--------------------02343533111256--655--
Q T0532 19 SCDKFDEINTDPDATTKVTSSLLATGLLLDITSSSASKS--------------------FIYDELLAKQMAWG--ESM-- 74 (506)
Q Consensus 19 SC~dfld~n~dp~~~t~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~--~~~-- 74 (506)
+|+|++..+.|+...++...+..++++|..+......+. +...+..++...++ ...
T Consensus 1 gc~dLD~~P~d~~~~~~~~~~~~l~~~Y~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~~tD~~~~~~~~~~~~ 80 (527)
T 3ckc_A 1 GINDLDISPIDPQTGGSFDQQGVFVKGYAMLGVTGQKGIDGSPDLDGQDEGESGFYRTTFNCNELPTDECLWAWQKNQDI 80 (527)
T ss_dssp ----------------CCCHHHHHHHHHHTTTBCC----------CCSCTTTTCHHHHHHHHHHTTSSSEEESCTTSTTH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCHHH
T ss_conf 98746899899888221767399999998544246567777764236556656421121221454551047156770578
Q ss_pred -------CCCCCCCCCCHHHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf -------56536654441778999999999999731---56679999999999999999999986189864225577644
Q T0532 75 -------EDYQYNVFGRSGFGGYTTLINAQKMVESV---SDDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELG 144 (506)
Q Consensus 75 -------~~~~~~~~~~~w~~~Y~~i~~~n~~i~~~---~~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~~ 144 (506)
.+.....+.+.|..+|..|.+||.+|+++ +++++++++|||+|||||+||.|+++||+||+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~W~~~Y~~I~~~N~~i~~~~~~~~~~~~~~~aEA~flRA~~yf~L~~~fG~vP~~~~~~---- 156 (527)
T 3ckc_A 81 PQLTSISWSPSSQRTEWVYVRLGYDITQYNFFLDQTEGMTDAETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFS---- 156 (527)
T ss_dssp HHHHHTCCCTTCHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHSEEEECSSCS----
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC----
T ss_conf 9986575088860578899999999999999998065899999999999999999999999999848812424666----
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHH
Q ss_conf 4567878889999999999999998445556655542247758999999999999999986246--46899999999999
Q T0532 145 LVRPKYNTQKEVMNFILSDLETAYELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKK--ESDADLKVKERFAR 222 (506)
Q Consensus 145 ~~~p~~~s~~evy~~I~~dL~~A~~~L~~~~~~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~--~~~~~~~~~~~~~~ 222 (506)
...++|.|++|||++|++||++|+++|+..... ..|+++|| +|.+|++|++|+.... ..+...+ ++....
T Consensus 157 ~~~~~r~s~~ev~~~I~~DL~~A~~~l~~~~~~-----~~gr~tk~--aA~al~ar~~L~~~~~~~~~~~~~a-~~~a~~ 228 (527)
T 3ckc_A 157 NDLPVEKKGTELYTYIQNELNEIEADMYEPRQA-----PFGRADKA--ANWLLRARLYLNAGVYTGQTDYAKA-EEYASK 228 (527)
T ss_dssp SSCCEEEEHHHHHHHHHHHHHHHGGGSCCTTCS-----CTTSCCHH--HHHHHHHHHHHTHHHHHSSCCHHHH-HHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCHHHH--HHHHHHHHHHHHHCCCCCCHHHHHH-HHHHHH
T ss_conf 666687899999999999999998737666544-----46724199--9999999999750121232438999-999865
Q ss_pred HHHCC-CCCCCCHHHEE--------------EEECCCCCC--CC--------------CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 87438-84246220125--------------520157762--01--------------0113334665542004899987
Q T0532 223 IVASG-SLMESNEDNLQ--------------MKYADKANT--VY--------------PFHNTNTKHAGYAMLSTMLIDK 271 (506)
Q Consensus 223 ~~~~~-~~~~~~~~~~~--------------~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~s~~~~~~ 271 (506)
+...+ .......+.+. +........ .. ........+++...++..+++.
T Consensus 229 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
T 3ckc_A 229 VIGSAYKLCTNYSELFMADNDENENAMQEIILPIRQDGVKTRNYGGSTYLVCGTRVAGMPRMGTTNGWSCIFARAAMVQK 308 (527)
T ss_dssp HHTSSCCCCSSGGGGGSTTTTTCHHHHTTEEEEECCCHHHHGGGBHHHHHHHTTCCTTCTTCSSSCCCCCEEECHHHHTT
T ss_pred HHHHHHCCCCCHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 14432112333776654322366211312301001366666665760122014555677766666776665676899998
Q ss_pred HHCCCC-CEEEE-EEECCCCCCCCC-----------C--------CCCCC-CCCCCCC------CCCCCCCCCCCCCCCC
Q ss_conf 513688-50255-564166554566-----------4--------45665-4314554------6655554555432333
Q T0532 272 FKATGD-IRMFY-YAKPAKAKLNEG-----------V--------TADSW-DAYIGTD------PSLPFEQIEKAYATEQ 323 (506)
Q Consensus 272 ~~~~~D-pR~~~-~~~~~~~~~~~~-----------~--------~~~~~-~~~~g~~------~~~~~~~~~~~~~~~~ 323 (506)
+....+ ++... ............ . ..... ..+.... ..........++...+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~k 388 (527)
T 3ckc_A 309 FFSNLEDVPMLPADVEIPTKGLDTDEQIDAFDAEHGIRTEDMIKAAGDDRALLYSGVGGGRRKIQTDAISGFTDGLSIVK 388 (527)
T ss_dssp TCSSGGGSCCCCTTSCCCSSSCCSHHHHHHHHHHTTCSHHHHHHHHTCTTCCEECSSTTSCCCSSCSSCCSGGGSCEECC
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 73357777666665446555556654333322345643232001367764124203567665333455566666630320
Q ss_pred CCCCCCC----CCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHH
Q ss_conf 3456765----577878885211526899999999998578982379999999999999730233100001345555445
Q T0532 324 YSGFNAR----YTDYPSGEPVVRLGYAEQNFILAEAAVRGWISGDASAYYKKAIRAHMEFIASNTPDEEVYHHGHPITEE 399 (506)
Q Consensus 324 ~~~~~~~----~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~s~~~~~~~~~~~~~~~~~~~~~~~ 399 (506)
+...... ........++++||+||||||+|||+++.|+ +|.+++|+ ||.. .+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~R~aev~L~~AEA~~~~g~--~A~~~iN~-vR~R---ag------------------ 444 (527)
T 3ckc_A 389 WQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTRAEAIFRQGG--DATGDINE-LRKR---AN------------------ 444 (527)
T ss_dssp SCSSCTTCCCCSCSSSCCCCEEEEETHHHHHHHHHHHHHTTC--CCHHHHHH-HHHH---TT------------------
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCC--HHHHHHHH-HHHH---CC------------------
T ss_conf 235567777667775455226886389999999999875176--59999999-9986---49------------------
Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCCCCCC-----CCCCCCCCCCCEEEECCC
Q ss_conf 677665214433577608899999999999963687114665110127870034567-----777777775315631772
Q T0532 400 AIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLPINPA-----TNRNTMNDRLPMRWMYPK 474 (506)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgyP~l~~~~~-----~~~~~~~~~~p~R~~yp~ 474 (506)
.+.. +.+..++.|+.||++||++|++ +|+|+||+|.+.-..... ..........-.-+|+|+
T Consensus 445 -------~~~~----~~~~~~~~I~~ER~~El~~Eg~--R~~Dl~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~PIP~ 511 (527)
T 3ckc_A 445 -------CTRK----VQTVTEQELIDEWAREFYLEGR--RRSDLVRFGMFTTNKYLWDWKGGAMNGTSVASYYNKYPIPV 511 (527)
T ss_dssp -------CSSC----CSSCCHHHHHHHHHHHHTTSSC--HHHHHHHTTCSSSTTCCCTTGGGCTTCCCCCGGGGSCCCCH
T ss_pred -------CCCC----CHHHHHHHHHHHHHHHHHCCCC--HHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCH
T ss_conf -------9977----7799999999999999973065--89999855945440403345676555666788727957889
Q ss_pred CHHHCCHHH
Q ss_conf 034416789
Q T0532 475 SESDYNLEH 483 (506)
Q Consensus 475 ~e~~~N~~~ 483 (506)
+|++.||+.
T Consensus 512 ~ei~~N~~l 520 (527)
T 3ckc_A 512 SDINNNRNM 520 (527)
T ss_dssp HHHHHCTTC
T ss_pred HHHHHCCCC
T ss_conf 999409898
No 11
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=100.00 E-value=0 Score=303.52 Aligned_cols=388 Identities=13% Similarity=0.052 Sum_probs=218.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCC-H------HHHHHHHHHCCCCCCCCC----------CCCCCCCCHHHHHHHH
Q ss_conf 7867634688999999998632001220-0------234353311125665556----------5366544417789999
Q T0532 30 PDATTKVTSSLLATGLLLDITSSSASKS-F------IYDELLAKQMAWGESMED----------YQYNVFGRSGFGGYTT 92 (506)
Q Consensus 30 p~~~t~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~w~~~Y~~ 92 (506)
....+..+.+..++++|..+........ . ...+..++....+..... .........|...|..
T Consensus 14 ~~~~~~~~~~~~l~g~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~Y~~ 93 (495)
T 3lew_A 14 SVFGKTGDAEKVLNGGWNYLMETFNSYANPGYGAMLRANDAMGSDVVLNSKYGFRTHNEFSAIYGKGGTNTLSWLLAYRV 93 (495)
T ss_dssp --CCBHHHHHHHHHHHHHHHHHCBSSTTCBTTHHHHHHHHHTSSSEEECSSTTTHHHHTTCTTTTTCHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 44079999999999999998863577776530034304311067632157766320002135668887320159999999
Q ss_pred HHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------CCCCC-CCCCCCCCCCCCCCCHHHH
Q ss_conf 99999999731-----56679999999999999999999986189----------86422-5577644456787888999
Q T0532 93 LINAQKMVESV-----SDDNVNAYDGLAHFIKAYKIFYMSMEMGD----------LPYEE-ALQGELGLVRPKYNTQKEV 156 (506)
Q Consensus 93 i~~~n~~i~~~-----~~~~~~~~~geA~~lRA~~y~~L~~~yG~----------VP~~e-~~~~~~~~~~p~~~s~~ev 156 (506)
|.+||.+|+.+ +++++++++|||+|||||+||.|+++||+ ||+.. ..........++|+|++||
T Consensus 94 I~~aN~~i~~i~~~~~~~~~~~~~~aeA~~lRA~~yf~L~~~fG~~~~~~~~~~~vP~~~~~~~~~~~~~~~~r~t~~ev 173 (495)
T 3lew_A 94 INDCNGVLDNIDAAEGTQADRNRIKGQALALRGFLYLHLASCYSFAIDKDPDAVCAPIYTQSTDETIAAEGKPASSVSEV 173 (495)
T ss_dssp HHHHHHHHHHGGGCBSCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTTCTTSEEECCCCSCC-CHHHHSCCCCEEHHHH
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 99999999715479999999999999999999999999999848876666655688642455775432113577879999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC-CCHH
Q ss_conf 999999999999844555665554224775899999999999999998624646899999999999874388424-6220
Q T0532 157 MNFILSDLETAYELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASGSLME-SNED 235 (506)
Q Consensus 157 y~~I~~dL~~A~~~L~~~~~~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (506)
|++|++||++|++.||....... .|+++|| +|++|++|++|++.++.. +++...+++..++... ..+.
T Consensus 174 y~~I~~dL~~A~~~Lp~~~~~~~----~gr~~k~--aA~al~ar~~L~~~~~~~-----a~~~a~~vi~~~~~~l~~~~y 242 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDA----KHKIDNE--VVLGILSRACLYARQWEK-----AKTYSDKLLAKDNYLMTESEY 242 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSS----TTSCCHH--HHHHHHHHHHHHTTCHHH-----HHHHHHHHHHHCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCH----HHHHHHH--HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHCCCCCCCCHHH
T ss_conf 99999999999984401467400----0033599--999999999986300999-----999999998658863663377
Q ss_pred HEEEEECCCCCCCCCCCCCCCCCCCCC-------------------CHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 125520157762010113334665542-------------------0048999875136885025556416655456644
Q T0532 236 NLQMKYADKANTVYPFHNTNTKHAGYA-------------------MLSTMLIDKFKATGDIRMFYYAKPAKAKLNEGVT 296 (506)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~s~~~~~~~~~~~DpR~~~~~~~~~~~~~~~~~ 296 (506)
...+. ...+.+..+........... .++..+.. +...+|+|...++........
T Consensus 243 ~~~~~--~~~~~E~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~r~~~~~~~~~~~~~---- 315 (495)
T 3lew_A 243 KAGFN--SVDNKEWIWGHAQTNDQSNASYQFHYLDTTTKGSYYYSFNVDPYFRD-LFEDGDYRKEMLFWATDPGAD---- 315 (495)
T ss_dssp TSCSC--CTTCTTEEEEECCBTTBCSGGGGHHHHCSSSTTCSCCCEEECGGGGG-GSCTTCTTGGGEEEECCTTSC----
T ss_pred HHHCC--CCCCHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHH-HHCCCCCCCCCEEECCCCCCC----
T ss_conf 76404--67870554100035787774310000146777776665568889987-403687312222323678876----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 56654314554665555455543233334567655778788852115268999999999985789823799999999999
Q T0532 297 ADSWDAYIGTDPSLPFEQIEKAYATEQYSGFNARYTDYPSGEPVVRLGYAEQNFILAEAAVRGWISGDASAYYKKAIRAH 376 (506)
Q Consensus 297 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~s 376 (506)
... .....+...++. . ........++++||+|||+||+|||++|.|+ .+|.+++|+ ||..
T Consensus 316 -----------~~~---~~~~~~~~~~~~---~-~~~~~~~~~~~i~R~aEv~L~~AEA~~~~~~-~~A~~~iN~-vR~R 375 (495)
T 3lew_A 316 -----------VES---AAYVWMRNSKFR---F-RDIENQLGDIVLMRVAEIYLINAEAKAHLND-PDAINKLND-LKTA 375 (495)
T ss_dssp -----------TTT---CCEEEEEECSSC---C-SBTTTTBCCEEEEEHHHHHHHHHHHHHHTTC-TTHHHHHHH-HHHH
T ss_pred -----------CCC---CCEECCCCCCCC---C-CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCC-HHHHHHHHH-HHHH
T ss_conf -----------677---511303455446---5-7877787875786799999999999988488-889999999-9997
Q ss_pred HHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCCCC--
Q ss_conf 997302331000013455554456776652144335776088999999999999636871146651101278700345--
Q T0532 377 MEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLPIN-- 454 (506)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgyP~l~~~-- 454 (506)
. +.+......+.++.++.|+.||++||++||+ +|+|+||+|.+.....
T Consensus 376 a----------------------------g~~~~~~~~t~~~~~~~I~~ER~~El~~EG~--r~~Dl~Rw~~~~~~~~~~ 425 (495)
T 3lew_A 376 R----------------------------GAKTIHTNLSQQDLLETIWLERRKELWGEGF--SLIDIIRNQQTVVRNAYP 425 (495)
T ss_dssp H----------------------------TCCCCCSCCCHHHHHHHHHHHHHHHSTTSSC--HHHHHHHTTCCCCCCCCC
T ss_pred C----------------------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--HHHHHHHCCCHHHCCCCC
T ss_conf 1----------------------------9996678789999999999999999980762--899998718454304433
Q ss_pred ----------CCCC--------CC-------CCCCCCC----EEEECCCCHHHCCHHHHH
Q ss_conf ----------6777--------77-------7777531----563177203441678999
Q T0532 455 ----------PATN--------RN-------TMNDRLP----MRWMYPKSESDYNLEHQN 485 (506)
Q Consensus 455 ----------~~~~--------~~-------~~~~~~p----~R~~yp~~e~~~N~~~~~ 485 (506)
.... .+ ......| .=+|+|++|++.||+.+|
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~y~~PIP~~ei~~Npnl~q 485 (495)
T 3lew_A 426 EGPIDYIYTDENGQTHTLKKKTQGHRFFNFPDKSAFCPNSKYYLYRITDSEELANKNLYK 485 (495)
T ss_dssp CCCEEEEEEC---CEEEEEEEEECCCCCSCTTSCCCCTTCGGGCCCCCHHHHHHCTTTTS
T ss_pred CCCCCCEECCCCCCCEEEECCCCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHCCCCCC
T ss_conf 455320110467750121013455302312444446667703781889999972978301
No 12
>3jq0_A SUSD superfamily protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE GOL SO4; 1.13A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=0 Score=302.92 Aligned_cols=428 Identities=16% Similarity=0.127 Sum_probs=221.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC----CCCC---CCC------CCCCCCCCHHHHHHHHHHHHH
Q ss_conf 867634688999999998632001220023435331112----5665---556------536654441778999999999
Q T0532 31 DATTKVTSSLLATGLLLDITSSSASKSFIYDELLAKQMA----WGES---MED------YQYNVFGRSGFGGYTTLINAQ 97 (506)
Q Consensus 31 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~------~~~~~~~~~w~~~Y~~i~~~n 97 (506)
...++.+.+..++++|..+..... ..+.+++..++... .+.. ... ...+.....|..+|..|.+||
T Consensus 5 ~~~t~~~~~~~l~g~Y~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~Y~~I~~aN 83 (493)
T 3jq0_A 5 YWKNPDQFTAFNTGLHALLREKSY-NFFLLGEPRADIYGDNPIGGEASQGMERLPFNTINKENVGISNYGDMYKIINQIN 83 (493)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHTHH-HHHHHHSTTSSSEEECCTTCCCCTTGGGTTTTCCBTTBCSSCGGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCC-CEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 886999999999999998770177-8178524334313567766774046678762877988755056999999999999
Q ss_pred HHHHHC------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCC---CCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999731------5667999999999999999999998618986422-5577---64445678788899999999999999
Q T0532 98 KMVESV------SDDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEE-ALQG---ELGLVRPKYNTQKEVMNFILSDLETA 167 (506)
Q Consensus 98 ~~i~~~------~~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e-~~~~---~~~~~~p~~~s~~evy~~I~~dL~~A 167 (506)
.+|+.+ +++++++++|||+|||||+||.|+++||+||+.. ...+ +.....++|++++|||++|++||++|
T Consensus 84 ~~I~~~~~~~~~~~~~~~~~~gea~flRA~~yf~L~~~fG~vP~~~~~~~~~~~~~~~~~~~r~t~~evy~~I~~DL~~A 163 (493)
T 3jq0_A 84 QMIAKTTETTILTEATQNYYLGEAYGMRAYLYFHLLRSWGDVVLYLDYTEGQNLDLSNITKGVSPATEVMEQIKKDIQAS 163 (493)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHSSBCCCCCCCC----------CCCBCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99970315899999999999999999999999999986599856677776667760220457688999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHCCCCCC--CCHHHEEEEEC
Q ss_conf 9844555665554224775899999999999999998624646---899999999999874388424--62201255201
Q T0532 168 YELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKKES---DADLKVKERFARIVASGSLME--SNEDNLQMKYA 242 (506)
Q Consensus 168 ~~~L~~~~~~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 242 (506)
+++|+........ .++++| .+|.+|++|++|++..... .....+++...++..++.... +..+.+ ...
T Consensus 164 ~~~L~~~~~~~~~---~~~~~k--~aa~~l~ar~~L~~~~~~~~~~~~~~~a~~~~~~vi~~~~~~l~~~y~~~f--~~~ 236 (493)
T 3jq0_A 164 ENAFGSDYSFKLG---RHFWSA--AATQMLKGEAYLWSGRQMNGGNSDYTIAKNAFENVKKADVGLVTSSFKDIF--SFE 236 (493)
T ss_dssp HHHHTTCCSCTTC---TTSCCH--HHHHHHHHHHHHHHHHHSSCTHHHHHHHHHHHHHHTTSSCCCCCSCHHHHH--CGG
T ss_pred HHHCCCCCCCCCC---CCCHHH--HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH--HCC
T ss_conf 8757344655556---440409--999999999999851012365214999999999998668662404688874--013
Q ss_pred CCCCCCCCCCCCCCC----CCCCCC------HHHHHHHHHHCC-CCC-----EEEEEE----ECCCCCCCCCCCCCCCCC
Q ss_conf 577620101133346----655420------048999875136-885-----025556----416655456644566543
Q T0532 243 DKANTVYPFHNTNTK----HAGYAM------LSTMLIDKFKAT-GDI-----RMFYYA----KPAKAKLNEGVTADSWDA 302 (506)
Q Consensus 243 ~~~~~~~~~~~~~~~----~~~~~~------~s~~~~~~~~~~-~Dp-----R~~~~~----~~~~~~~~~~~~~~~~~~ 302 (506)
+..+.+..+...... .++... ....++..+... ..+ ...... ..............+...
T Consensus 237 ~~~~~E~If~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~r~ 316 (493)
T 3jq0_A 237 NKKNKEMIFTIHNGKDEYEMWGGYYRMRLIPAQDKMVKIYCDENGNSFVGTPDAQLNGLTQLQVRREFYFKGFRNNDTRW 316 (493)
T ss_dssp GTTCTTEEEEECCBTTTBCGGGGTTHHHHCCCHHHHHHTCBCTTSCCCTTSGGGGCCCCBSSEECGGGGGTSCCTTCTHH
T ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 67880169988723776666566445544577531222010478851146775445776555654688987512577520
Q ss_pred CCC--C--CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH-
Q ss_conf 145--5--4665555455543233334567-655778788852115268999999999985789823799999999999-
Q T0532 303 YIG--T--DPSLPFEQIEKAYATEQYSGFN-ARYTDYPSGEPVVRLGYAEQNFILAEAAVRGWISGDASAYYKKAIRAH- 376 (506)
Q Consensus 303 ~~g--~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~s- 376 (506)
... . ...........++...++.... ..........++++||+|||+||+|||+++.|+ +|.+++++ ||..
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~i~R~aE~~L~~AEA~~~~g~--~a~~~iN~-VR~Ra 393 (493)
T 3jq0_A 317 TTSLKAVYKKDAQGVVSYFGPITYKFQGTMLEGGSTRSFLDDFPIYRYADCLLQLAMAKVLLGE--DPTEEINA-VRERA 393 (493)
T ss_dssp HHHEEEEEEECTTSCEEEEEEEECSCCCBCCTTCSSCBCCCCEEEEEHHHHHHHHHHHHHHTTC--CCHHHHHH-HHHHH
T ss_pred CEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCC--CHHHHHHH-HHHHH
T ss_conf 1021033344467765555640110157667788777663037998658999999999998586--49999999-99982
Q ss_pred -HHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCCCCC
Q ss_conf -9973023310000134555544567766521443357760889999999999996368711466511012787003456
Q T0532 377 -MEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLPINP 455 (506)
Q Consensus 377 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgyP~l~~~~ 455 (506)
+..+.......... . .......+.. ......+.+..++.|+.||++||++|+. +|+|+||+|++......
T Consensus 394 ~~~~~~~~~~~~~~~-~----~~~~~~~~~~--~~~~~~~~~~~~~~I~~ER~~El~~Eg~--r~~Dl~R~g~~~~~~~~ 464 (493)
T 3jq0_A 394 YGSKYFNEHKAEIAY-P----NDNDPEFYTD--NKWMKPDNAGALEAILKERLREFMFEGK--RWYDIRLLGWDYVHQYS 464 (493)
T ss_dssp HCHHHHHHCHHHHST-T----CCCCHHHHTT--CTTCCCGGGCHHHHHHHHHHHHCTTSSC--HHHHHHHHCHHHHHHHC
T ss_pred CCCCCCHHHHHHCCC-C----CCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHCCCC--HHHHHHHCCCCCCCCCC
T ss_conf 475100034431045-6----5443222333--2224678999999999999999865371--99999761975003468
Q ss_pred CCCCCCCCCCCCEEEECCCCHHHCCHHHH
Q ss_conf 77777777753156317720344167899
Q T0532 456 ATNRNTMNDRLPMRWMYPKSESDYNLEHQ 484 (506)
Q Consensus 456 ~~~~~~~~~~~p~R~~yp~~e~~~N~~~~ 484 (506)
.. ......+|+|++|++.||+..
T Consensus 465 ~~------~~~~~~~PIP~~ei~~N~~l~ 487 (493)
T 3jq0_A 465 SA------EQSRLLWPIDAGTLTNNSALK 487 (493)
T ss_dssp CC------CGGGSSCCCCHHHHHHCTTCC
T ss_pred CC------CCCEEEECCCHHHHHHCCCCC
T ss_conf 78------874179488899993189987
No 13
>3jys_A SUSD superfamily protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=0 Score=307.13 Aligned_cols=356 Identities=11% Similarity=0.106 Sum_probs=200.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 44417789999999999997315----66799999999999999999999861898642255776444567878889999
Q T0532 82 FGRSGFGGYTTLINAQKMVESVS----DDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELGLVRPKYNTQKEVM 157 (506)
Q Consensus 82 ~~~~w~~~Y~~i~~~n~~i~~~~----~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~~~~~p~~~s~~evy 157 (506)
+...|..+|..|.+||.+|+.++ +.++++++|||+|||||+||.|+++||+||+.+.. .....++|.|++|||
T Consensus 85 ~~~~W~~~Y~~I~~aN~~i~~i~~~~~~~~k~~~~gEA~flRA~~Yf~L~~~yG~vP~~~~~---~~~~~~~r~t~~evy 161 (499)
T 3jys_A 85 IEGVYQRCMYIVALVNEFLKNIPNAPESIDKESYIAQARFNRAFAYYVLMDMFALPPFITEK---NYSIEPAPLSREDLF 161 (499)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHHSCCBCCCTT---SCCSSCCBCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC---CCCCCCCCCCHHHHH
T ss_conf 99999999999999999998332699888999999999999999999999980897677578---765556778999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHH-CCCCCCCCH
Q ss_conf 99999999999844555665554224775899999999999999998624646--899999999999874-388424622
Q T0532 158 NFILSDLETAYELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKKES--DADLKVKERFARIVA-SGSLMESNE 234 (506)
Q Consensus 158 ~~I~~dL~~A~~~L~~~~~~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~ 234 (506)
++|++||++|+++||.... ..|+++|| +|.+|++|++|++..+.. ..+ ++++...+++. .+.+.+...
T Consensus 162 ~~I~~DL~~A~~~Lp~~~~------~~gr~tk~--aa~al~arv~L~~~~~~~~~~~~-~a~~~a~~vi~~gy~L~~~y~ 232 (499)
T 3jys_A 162 NWIEAELNEIKPNLPSPRS------EYGVADQA--VASALLARMYLNAEIYTGKARYT-ECINACNEVIKAGYQLADNYA 232 (499)
T ss_dssp HHHHHHHHHHGGGSCCTTS------STTSCCHH--HHHHHHHHHHHTHHHHHSSCCHH-HHHHHHHHHHHTTCCCCSCTG
T ss_pred HHHHHHHHHHHHCCCCCCC------CCCCCCHH--HHHHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHCCCCCCCCHH
T ss_conf 9999999999970898854------47841599--99999999999865203407799-999999998733763211288
Q ss_pred HHEE----------------EEECCCCCCCCCC------------------CCCCCCCCCCCCHHHHHHHHHHCCCC--C
Q ss_conf 0125----------------5201577620101------------------13334665542004899987513688--5
Q T0532 235 DNLQ----------------MKYADKANTVYPF------------------HNTNTKHAGYAMLSTMLIDKFKATGD--I 278 (506)
Q Consensus 235 ~~~~----------------~~~~~~~~~~~~~------------------~~~~~~~~~~~~~s~~~~~~~~~~~D--p 278 (506)
+.+. ..+.......+.. ......+++...++..+++.+...+| |
T Consensus 233 ~~f~~~~~~~~~~~~E~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (499)
T 3jys_A 233 DLFKADNGENPDTKKEIIYPIIFDGDKTQSWGMAAIIIGARGAEDKDVLLAHSGVDQGWAGFRATSNLVHLFDFQNDEEP 312 (499)
T ss_dssp GGGSTTTTTCHHHHTTEEEEECCCCC---CCHHHHHHHTTSCSCCHHHHHHHHSCSCCCCCEECCHHHHHTSCBSSTTSC
T ss_pred HHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 87543157886567247877640578777767530311466777755324555666887676588888765430278443
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCEEHHHHHHHHHHHHH
Q ss_conf 025556416655456644566543145546655554555432333345676----5577878885211526899999999
Q T0532 279 RMFYYAKPAKAKLNEGVTADSWDAYIGTDPSLPFEQIEKAYATEQYSGFNA----RYTDYPSGEPVVRLGYAEQNFILAE 354 (506)
Q Consensus 279 R~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~r~AEv~ll~AE 354 (506)
|..............+.... ............++...++..... .........++++||+||||||+||
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~i~R~aEvyL~~AE 385 (499)
T 3jys_A 313 KASEIQDKRGIFYDKGRSID-------ITSSVSGTFETEGWSVFKFSNLNSNGQPGKNTLWVDTDFPMFRLGDIYLMYAE 385 (499)
T ss_dssp CGGGBSSTTCCEECTTCBSS-------CCSCSTTCTTTBSCEECCSCSBCTTSCBCSCSSSCCCCEEEEEHHHHHHHHHH
T ss_pred CCCCCCCCCCEECCCCCCCC-------CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH
T ss_conf 22101356642315886422-------35566774335673056530346778877554455466367535899999999
Q ss_pred HHHHCCCCC--CHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 998578982--379999999999999730233100001345555445677665214433577608899999999999963
Q T0532 355 AAVRGWISG--DASAYYKKAIRAHMEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASF 432 (506)
Q Consensus 355 A~~r~g~~~--~A~~~y~~gi~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~ 432 (506)
|+++.|+.. +|.+++|+ ||.-. +... ........+.+..++.|+.||++||+
T Consensus 386 A~~~~g~~~~a~A~~~iN~-VR~Ra---g~~~----------------------~~~~~~~~~~~~~~~~I~~ER~~El~ 439 (499)
T 3jys_A 386 AVARGGEGSKASAVEYINA-LRKRA---YGDD----------------------KHNISENWLEENNFRNLLDERGRELY 439 (499)
T ss_dssp HHHTTCSSCHHHHHHHHHH-HHHHH---HSSS----------------------SSCCCHHHHHTTTTHHHHHHHHHHHT
T ss_pred HHHHHCCCCHHHHHHHHHH-HHHHC---CCCC----------------------CCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9998589988999999999-99970---8998----------------------66657420479999999999999997
Q ss_pred CCCCHHHHHHCHHCCCCCCCCCC-----CCCCCCCCCCCCEEEECCCCHHHCCHHHH
Q ss_conf 68711466511012787003456-----77777777753156317720344167899
Q T0532 433 MQHPYDVYYDYRRTGYPVLPINP-----ATNRNTMNDRLPMRWMYPKSESDYNLEHQ 484 (506)
Q Consensus 433 ~~~~~e~w~d~RRtgyP~l~~~~-----~~~~~~~~~~~p~R~~yp~~e~~~N~~~~ 484 (506)
+|++ +|+|+||.|...-.... ...........-.-+|+|++|++.||+..
T Consensus 440 ~Eg~--R~~Dl~Rw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PIP~~ei~~Np~l~ 494 (499)
T 3jys_A 440 WEGI--RRTDLVRFDLLTSGSYTWDFKGGINTGVGVNKRYNVYPIPVTDLTVNGNLQ 494 (499)
T ss_dssp TSSC--HHHHHHHTTCSSCSSSCCTTGGGCTTCCCCCGGGGSCCCCHHHHHHCTTCC
T ss_pred CCCC--HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCC
T ss_conf 4374--899997449512255222234666667767888079588899994189998
No 14
>3kez_A Putative sugar binding protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=0 Score=297.09 Aligned_cols=379 Identities=18% Similarity=0.160 Sum_probs=220.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHCCCCCCCCC---------CCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 676346889999999986320012--200234353311125665556---------536654441778999999999999
Q T0532 32 ATTKVTSSLLATGLLLDITSSSAS--KSFIYDELLAKQMAWGESMED---------YQYNVFGRSGFGGYTTLINAQKMV 100 (506)
Q Consensus 32 ~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~w~~~Y~~i~~~n~~i 100 (506)
..+..+.+..++++|..+...... ....+.+..++.+........ ...+...+.|..+|..|.+||.+|
T Consensus 17 ~~t~~~~~~~l~g~Y~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~Y~~I~~aN~~l 96 (461)
T 3kez_A 17 INVLSDIEFTLNGIYSTMQSSDAYSGRLVYYGDVTGDDMQAVSSTKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLIL 96 (461)
T ss_dssp CSSHHHHHHHHHHHHHHHTSTTTTTTHHHHHHHHTSSSEEESSTTSTTHHHHTTCCCTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 17999999999999998743787760688877633655042588743235763455788745779999999999999999
Q ss_pred HHCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---------CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 7315--------66799999999999999999999861898642255---------776444567878889999999999
Q T0532 101 ESVS--------DDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEAL---------QGELGLVRPKYNTQKEVMNFILSD 163 (506)
Q Consensus 101 ~~~~--------~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~---------~~~~~~~~p~~~s~~evy~~I~~d 163 (506)
+.++ ++.+++++|||+|||||+||.|+++||++|+.... ........++|+|++|||++|++|
T Consensus 97 ~~i~~~~~~~~~~~~k~~~~gEA~flRA~~yf~L~~~~G~~~~~~~~~~~~vPl~~~~~~~~~~~~r~t~~ev~~~I~~d 176 (461)
T 3kez_A 97 MNVDKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYLKDNGASLGVPIVKELSTIDSKPARNTVAECYTEIISD 176 (461)
T ss_dssp TTGGGSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHTTCSBCCCCCCSCCCTTCCCCCCBHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 87643888865599999999999999999999999981977356875456887314666743345657699999999988
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHEEEEEC
Q ss_conf 99999844555665554224775899999999999999998624646899999999999874-38842462201255201
Q T0532 164 LETAYELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVA-SGSLMESNEDNLQMKYA 242 (506)
Q Consensus 164 L~~A~~~L~~~~~~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (506)
|++|++.||.... .|+++|| +|++|++|++|++.++.. +...+.+.+..... .+.+.+..++...+...
T Consensus 177 L~~A~~~Lp~~~~-------~~r~tk~--aA~allarv~L~~~~~~~-A~~~a~~vi~~~~~~~y~l~~~~~~~~~~~~~ 246 (461)
T 3kez_A 177 LKNSTELLSGDFN-------KGKVNRW--AAMTLLSRVYLYKGEYNE-ALTMAENAIKGAEKEGYALWTNEEYPTAWGND 246 (461)
T ss_dssp HHHHHHHSCCSCC-------TTSCCHH--HHHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHHHTCCCCCTTTHHHHTTSC
T ss_pred HHHHHHHCCCCCC-------CCCCCHH--HHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC
T ss_conf 8877763234433-------4235088--887799999987168799-99999999977664275655672677875154
Q ss_pred CCCCC--CCCCC--C--------------CCCCCCCCCCHHHHHHHHHHCC-CCCEEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 57762--01011--3--------------3346655420048999875136-8850255564166554566445665431
Q T0532 243 DKANT--VYPFH--N--------------TNTKHAGYAMLSTMLIDKFKAT-GDIRMFYYAKPAKAKLNEGVTADSWDAY 303 (506)
Q Consensus 243 ~~~~~--~~~~~--~--------------~~~~~~~~~~~s~~~~~~~~~~-~DpR~~~~~~~~~~~~~~~~~~~~~~~~ 303 (506)
..... ...+. . ......+...++..+++.+... .|.|...+....
T Consensus 247 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~~~~---------------- 310 (461)
T 3kez_A 247 ASASNPGEILFEIVNLTTDSPGKESMGYLNSYNGYDDMCITCSFYQLLKKDPKDVRLKILSFDK---------------- 310 (461)
T ss_dssp CBTTBCTTEEEEECCBTTBCCCTTSHHHHTCTTTTCCEEECHHHHHHHHTSTTCGGGGGEEEET----------------
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCC----------------
T ss_conf 3457760013443125678898766665555575665557778998752287544333431377----------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 45546655554555432333345676557787888521152689999999999857898237999999999999973023
Q T0532 304 IGTDPSLPFEQIEKAYATEQYSGFNARYTDYPSGEPVVRLGYAEQNFILAEAAVRGWISGDASAYYKKAIRAHMEFIASN 383 (506)
Q Consensus 304 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~s~~~~~~~ 383 (506)
.......++.. .........++++||+||||||+|||++|.|+.++|.+++|+ ||... +.
T Consensus 311 ------------~~~~~~~k~~~---~~~~~~~~~~~~i~R~aEv~L~~AEA~~~~g~~~~A~~~iN~-vR~Ra---g~- 370 (461)
T 3kez_A 311 ------------KYYAYVNKYQP---QQGENITDANIPLIRLSEAYLNAAEAAVQTGDNAKAVKYLNS-IVQRA---NP- 370 (461)
T ss_dssp ------------TTEEEETTCCC---CTTCCGGGCCEEEEEHHHHHHHHHHHHHHTTCHHHHHHHHHH-HHHHH---CT-
T ss_pred ------------CCCCCCCCCCC---CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHH-HHHHC---CC-
T ss_conf ------------53232334456---689877778715777899999999999875880789999889-99845---88-
Q ss_pred CCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCCCCCCC---C--
Q ss_conf 31000013455554456776652144335776088999999999999636871146651101278700345677---7--
Q T0532 384 TPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLPINPAT---N-- 458 (506)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgyP~l~~~~~~---~-- 458 (506)
+.. ..+.+..++.|+.||++||++|++ +|+|+||+|.......... .
T Consensus 371 ------------------------~~~--~~~~~~~~~~I~~ER~~El~~EG~--R~~Dl~R~g~~~~~~~~~~~~~~~~ 422 (461)
T 3kez_A 371 ------------------------ENS--VEGKTLTLENVLDERRKELVAEGH--RMYDVIRNGMTVKRIDVKDSDINKT 422 (461)
T ss_dssp ------------------------TCC--CTTCCCCHHHHHHHHHHHHTTTTC--HHHHHHTTTCCEECCCCCCGGGTTC
T ss_pred ------------------------CCC--CCCHHHHHHHHHHHHHHHHHHCCC--HHHHHHHCCCHHHHHCCCCCCCCCC
T ss_conf ------------------------877--778899999999999999981575--7999855585787530236764444
Q ss_pred -CCCC-----CCCCCEEEECCCCHHHCCHHHH
Q ss_conf -7777-----7753156317720344167899
Q T0532 459 -RNTM-----NDRLPMRWMYPKSESDYNLEHQ 484 (506)
Q Consensus 459 -~~~~-----~~~~p~R~~yp~~e~~~N~~~~ 484 (506)
.+.. ...--.-+|+|++|++.||+..
T Consensus 423 ~~~~~~~~~~~~~~~~~~PIP~~ei~~Np~l~ 454 (461)
T 3kez_A 423 KHNTAYMEYDWNFHKILLPIPKKEMDANPNMK 454 (461)
T ss_dssp CCCCSCCEECTTCGGGSCCCCHHHHHHCTTCC
T ss_pred CCCCCCCCCCCCCCEEEECCCHHHHHCCCCCC
T ss_conf 56654332478877379368899993099987
No 15
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=0 Score=306.94 Aligned_cols=408 Identities=14% Similarity=0.057 Sum_probs=221.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHCCCCCC-----------CCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 87867634688999999998632001220--0234353311125665-----------5565366544417789999999
Q T0532 29 DPDATTKVTSSLLATGLLLDITSSSASKS--FIYDELLAKQMAWGES-----------MEDYQYNVFGRSGFGGYTTLIN 95 (506)
Q Consensus 29 dp~~~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~w~~~Y~~i~~ 95 (506)
+....|..+.+..++++|..+........ +..++..++....... ..........+.|..+|..|.+
T Consensus 5 ~~~~~t~~~~~~~l~g~Y~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~Y~~I~~ 84 (478)
T 3hdx_A 5 TQQWKTLEDTRSALMGVYGLTRAALADNNTHWICGDLRKGDFTVYKRSDLQAVSDNELNKPYDLLKKVSNWRRFYAVINA 84 (478)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHGGGHHHHHHTTTTCSCEESSCHHHHHHHTTCTTSSCHHHHHHHCCHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 53228999999999999999872056764467641003564253588734333136123578788642359999999999
Q ss_pred HHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999731----------56679999999999999999999986189864225577644456787888999999999999
Q T0532 96 AQKMVESV----------SDDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELGLVRPKYNTQKEVMNFILSDLE 165 (506)
Q Consensus 96 ~n~~i~~~----------~~~~~~~~~geA~~lRA~~y~~L~~~yG~VP~~e~~~~~~~~~~p~~~s~~evy~~I~~dL~ 165 (506)
||.+|+.+ +++++++++|||+|||||+||.|+++||+||+.+..........++|+|++|||++|++||+
T Consensus 85 ~N~~i~~~~~~~~~~~~~~~~~~~~~~aeA~~lRA~~y~~L~~~yG~vP~~~~~~~~~~~~~~~r~s~~evy~~ii~dL~ 164 (478)
T 3hdx_A 85 ASVFMEKAPRTVELDRSYSEQNLKYDIAQVRALRAFAYFYMVRIWGDVPLVTYSYDNGTFPSMPRTDAQTVLSYAKAELL 164 (478)
T ss_dssp HHHHHHHTHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHSSBCCCCSCCCTTCCCCCCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999732025556766699999999999999999999999983489815566777543246687888999999999999
Q ss_pred HHHHHCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHH--
Q ss_conf 9998445556655542--------247758999999999999999986246468999999999998743884246220--
Q T0532 166 TAYELFSTAKDFDGDP--------ILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASGSLMESNED-- 235 (506)
Q Consensus 166 ~A~~~L~~~~~~~~~~--------~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (506)
+|++.||......... ..++.++| .+|++|++|++|++.++... ...+...+.....-...+....+
T Consensus 165 ~A~~~Lp~~~~~~~~~~~~~~~~~~~~~~~~k--~aa~al~arv~l~~~~~~~a-~~~a~~vi~~~~~~~~~~~~~~~~~ 241 (478)
T 3hdx_A 165 TAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNK--LSAYSVLAHICAWQGNYAEA-ETYSAFIIDHASEINAKYTSIADLT 241 (478)
T ss_dssp HHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCH--HHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHGGGGTCCCCCHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHCCCCHHHHCCCC
T ss_conf 99972720125654333210356788899899--99999998998852104789-9999999843110154300102444
Q ss_pred -HEEEEECCCCC-CCCCCCCCCC-----------------------CCCC-CCCHHHHHHHHHHCCCCCEEEEEEECCCC
Q ss_conf -12552015776-2010113334-----------------------6655-42004899987513688502555641665
Q T0532 236 -NLQMKYADKAN-TVYPFHNTNT-----------------------KHAG-YAMLSTMLIDKFKATGDIRMFYYAKPAKA 289 (506)
Q Consensus 236 -~~~~~~~~~~~-~~~~~~~~~~-----------------------~~~~-~~~~s~~~~~~~~~~~DpR~~~~~~~~~~ 289 (506)
.....+..... ....+..... .... .......+...+....|+|..........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~r~~~~~~~~~~ 321 (478)
T 3hdx_A 242 SETGLFYSNASVKGSRILGFNFAHNDNEATQSGHLEQLTLAYPLVQKSYPEIYISKDSLFSIFTNFDDLRFGIIDTIKYS 321 (478)
T ss_dssp STTSTTBTTCTTGGGCSEEECCC---------CCHHHHHCCTTTSSCSSCSEECCHHHHHHHCCCTTCTTSSSCCSSTTC
T ss_pred CCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 20000101345677603455641156777777865654334566567666555672288873246776332222233346
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 545664456654314554665555455543233334-5676557787888521152689999999999857898237999
Q T0532 290 KLNEGVTADSWDAYIGTDPSLPFEQIEKAYATEQYS-GFNARYTDYPSGEPVVRLGYAEQNFILAEAAVRGWISGDASAY 368 (506)
Q Consensus 290 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~AEv~ll~AEA~~r~g~~~~A~~~ 368 (506)
+..................+. .............++++||+|||+||+|||++|+|+.++|.++
T Consensus 322 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~aEv~L~~AEA~~~~g~~~~A~~~ 386 (478)
T 3hdx_A 322 ---------------SYYVQNLNEETPVFSKIKIIQDGSAKDNDFGVFGSSIVFTRLEDITLLRAEALCALNRSTEAVSY 386 (478)
T ss_dssp ---------------CSSEECTTSSSCEECSCCCBC---------CCBCBCEEEECHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ---------------CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf ---------------54233467653012235204677767787776651489976688999999999985881899999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCC
Q ss_conf 99999999997302331000013455554456776652144335776088999999999999636871146651101278
Q T0532 369 YKKAIRAHMEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGY 448 (506)
Q Consensus 369 y~~gi~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgy 448 (506)
+|+ ||... +. ...+.. .....+.+..++.|+.||++||++|+. .|+|+||.|.
T Consensus 387 lN~-vR~ra---g~-----------~~~~~~----------~~~~~~~~~~~~~I~~ER~~El~~Eg~--r~~Dl~R~~~ 439 (478)
T 3hdx_A 387 LNM-IRTNR---GL-----------REVSFK----------KDFGNNRESLIAEIFEERRRELMGEGW--RWYDLVRRQK 439 (478)
T ss_dssp HHH-HHTTT---TC-----------CCCCHH----------HHHTTCHHHHHHHHHHHHHHHTTTTTC--HHHHHHHHHH
T ss_pred HHH-HHHHC---CC-----------CCCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHCCC--HHHHHHHCCC
T ss_conf 999-99965---99-----------977765----------566678999999999999999981275--9999850696
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCHHHH
Q ss_conf 700345677777777753156317720344167899
Q T0532 449 PVLPINPATNRNTMNDRLPMRWMYPKSESDYNLEHQ 484 (506)
Q Consensus 449 P~l~~~~~~~~~~~~~~~p~R~~yp~~e~~~N~~~~ 484 (506)
..... .......... ...+|+|++|++.||+..
T Consensus 440 ~~~~~-~~~~~~~~~~--~~~~PiP~~ei~~N~~l~ 472 (478)
T 3hdx_A 440 LMKDN-EAFLRLISSG--GIYWPVSEDIITANSQIE 472 (478)
T ss_dssp HHCCC-HHHHHHHHHT--TTSCCCCHHHHHHCTTCC
T ss_pred HHHHC-CCCCCCCCCC--EEEECCCHHHHHHCCCCC
T ss_conf 04306-4535556888--089648899994289988
No 16
>3l22_A SUSD superfamily protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.05A {Bacteroides fragilis}
Probab=100.00 E-value=0 Score=302.90 Aligned_cols=396 Identities=16% Similarity=0.130 Sum_probs=222.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCC-----CHHHHHHHHHHCCCCCCCC-----------CCCCCCCCCHHHHHHHH
Q ss_conf 8786763468899999999863200122-----0023435331112566555-----------65366544417789999
Q T0532 29 DPDATTKVTSSLLATGLLLDITSSSASK-----SFIYDELLAKQMAWGESME-----------DYQYNVFGRSGFGGYTT 92 (506)
Q Consensus 29 dp~~~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~w~~~Y~~ 92 (506)
+....+..+.+.+++++|..+....... .....+..++......... ....+.....|...|..
T Consensus 12 ~~~~~~~~~~~~~l~g~Y~~l~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~Y~~ 91 (441)
T 3l22_A 12 NDIFTSPTRIEATLNGLYAAIKNTGTKSLMGGKSYLVFDNRGDDVINISNNLVTLFNTYNMNVGITDAENADTWTYAYLA 91 (441)
T ss_dssp -CCCCSHHHHHHHHHHHHHHHHBCSSCBSTTTHHHHHHHHHSSSEEECCCCGGGTHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 66737999999999999999871587676675045410103665465578831122421456688763688999999999
Q ss_pred HHHHHHHHHHCC------HHHHHHHHHHHHHHHHHHHHHHHHHH----------CCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 999999997315------66799999999999999999999861----------89864225577644456787888999
Q T0532 93 LINAQKMVESVS------DDNVNAYDGLAHFIKAYKIFYMSMEM----------GDLPYEEALQGELGLVRPKYNTQKEV 156 (506)
Q Consensus 93 i~~~n~~i~~~~------~~~~~~~~geA~~lRA~~y~~L~~~y----------G~VP~~e~~~~~~~~~~p~~~s~~ev 156 (506)
|.+||.+|+.++ ++++++++|||+|||||+||.|+++| |+||+............++|.+++||
T Consensus 92 I~~aN~~i~~i~~~~~~~~~~~~~~~geA~~lRA~~y~~L~~~y~~~~~~~~~~~~vp~~~~~~~~~~~~~~~r~t~~ev 171 (441)
T 3l22_A 92 INKVNTFLQSLEGAREVAGENYDRYVQEAKFVRALAYYYLNNLYPTPYSVNPDAKSVPLRLTAEAGTENNNMPRSTVKQI 171 (441)
T ss_dssp HHHHHHHHHHHHTTHHHHGGGHHHHHHHHHHHHHHHHHHHTTTSSCCTTTCTTCBCCCCCCSCCCSSTTCCCCCCBHHHH
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHH
T ss_conf 99999999721158988999999999999999999999999984676666776798754721577621023564329999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf 99999999999984455566555422477589999999999999999862464689999999999987438842462201
Q T0532 157 MNFILSDLETAYELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASGSLMESNEDN 236 (506)
Q Consensus 157 y~~I~~dL~~A~~~L~~~~~~~~~~~~~g~~~kw~~~A~aL~ar~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (506)
|++|++||++|+.+||....... .|+++| .+|++|++|+||++.++.. + .+ ....+....+.....+.
T Consensus 172 ~~~I~~dL~~A~~~l~~~~~~~~----~gr~~k--~aa~al~Arv~L~~~~~~~----A-~~-~a~~v~~~~l~~~~~~~ 239 (441)
T 3l22_A 172 YEHILSDLENISALDTEVNTYTG----VTHATQ--AAANMLKMRVYMAMNEWDK----A-IT-AGELVTGYSLPEDVTLI 239 (441)
T ss_dssp HHHHHHHTSCCTTSBCCSSSHHH----HHSCBH--HHHHHHHHHHHHHTTCHHH----H-HH-HHHTCCSCCCCSCTTGG
T ss_pred HHHHHHHHHHHHHHCCCCCCCCC----CCCCCH--HHHHHHHHHHHHCCCCHHH----H-HH-HHHHHHHCCCHHHHHHH
T ss_conf 99999999999873765555568----875669--9999999999853101699----9-99-99998716635778987
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 25520157762010113334665542004899987513688502555641665545664456654314554665555455
Q T0532 237 LQMKYADKANTVYPFHNTNTKHAGYAMLSTMLIDKFKATGDIRMFYYAKPAKAKLNEGVTADSWDAYIGTDPSLPFEQIE 316 (506)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~DpR~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (506)
+.... .+.+..+........... ....+...+. ..+.... ............ ....+.+.. ....
T Consensus 240 ~~~~~---~~~e~i~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~-----~~~~d~~~~-~~~~ 304 (441)
T 3l22_A 240 YKAPY---FSQESIFSLPMADTNIPN-TQQSLAEYYY-DGKIMLI----DTKSGIMSKPDY-----SLATDKRII-AFKG 304 (441)
T ss_dssp GSTTS---CCTTEEEEECCCTTTCCC-TTCSHHHHHT-TSSSEEE----CTTTSGGGSGGG-----SCTTCHHHH-HHBC
T ss_pred HCCCC---CCCCEEEEEECCCCCCCC-CCCHHEEEEC-CCCCCCC----CCCCCCCCCCCC-----CCCCCCCEE-ECCC
T ss_conf 34567---995147987515788877-7540104522-6874345----565543346655-----457773024-3136
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCC
Q ss_conf 543233334567655778788852115268999999999985-7898237999999999999973023310000134555
Q T0532 317 KAYATEQYSGFNARYTDYPSGEPVVRLGYAEQNFILAEAAVR-GWISGDASAYYKKAIRAHMEFIASNTPDEEVYHHGHP 395 (506)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~AEv~ll~AEA~~r-~g~~~~A~~~y~~gi~~s~~~~~~~~~~~~~~~~~~~ 395 (506)
......++.. ......++++||++|||||+|||+++ +|..+.|.+++|. ||... +....
T Consensus 305 ~~~~~~k~~~------~~~~~~~~~~~R~aE~yL~~AEA~~~~~g~~~~A~~~lN~-vR~Ra---~~~~~---------- 364 (441)
T 3l22_A 305 EKDLLMKFTD------AKTKLQWVPIFRYAETLLDLAECYANKAGGEATAKSLLKQ-VRGRS---VDAAT---------- 364 (441)
T ss_dssp GGGCBCSSCC------TTTCCCCEEEEEHHHHHHHHHHHHHTSTTCHHHHHHHHHH-HHHHH---SCGGG----------
T ss_pred CCCEEEECCC------CCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHH-HHHHH---CCCCC----------
T ss_conf 7742422567------8887477514339999999999999861997999999999-99972---56877----------
Q ss_pred CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 54456776652144335776088999999999999636871146651101278700345677777777753156317720
Q T0532 396 ITEEAIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLPINPATNRNTMNDRLPMRWMYPKS 475 (506)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~le~I~~Qk~ia~~~~~~~e~w~d~RRtgyP~l~~~~~~~~~~~~~~~p~R~~yp~~ 475 (506)
.+......+++..+++|+.||++||++|++ +|+|+||+|.+....................||+|++
T Consensus 365 -----------~~~~~~~~t~~~~~~~I~~ER~~El~~EG~--r~~Dl~R~~~~~~~~~~~~~~~~~~~~~~~~~PIP~~ 431 (441)
T 3l22_A 365 -----------DPLNIDNLSGDALKEAIYNEKRLEFIGEGI--RGIDIMRRGEHFIKVGENETINVGPSDEKYTWPIPQV 431 (441)
T ss_dssp -----------CSCCGGGCCHHHHHHHHHHHHHHHTTTSSC--HHHHHHHTTCCEEEECSSCEEEECTTSGGGSCCCCHH
T ss_pred -----------CCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--HHHHHHCCCCCHHHCCCCCCCCCCCCCCEEEECCCHH
T ss_conf -----------865666568999999999999999984885--6999845998132126776201588886279479899
Q ss_pred HHHCCHHHH
Q ss_conf 344167899
Q T0532 476 ESDYNLEHQ 484 (506)
Q Consensus 476 e~~~N~~~~ 484 (506)
|+..||+..
T Consensus 432 Ei~~Npnl~ 440 (441)
T 3l22_A 432 ELLLNKDIN 440 (441)
T ss_dssp HHHHCTTTT
T ss_pred HHHHCCCCC
T ss_conf 994486989
No 17
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=43.30 E-value=11 Score=14.59 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 999999999985789823799999999
Q T0532 347 EQNFILAEAAVRGWISGDASAYYKKAI 373 (506)
Q Consensus 347 Ev~ll~AEA~~r~g~~~~A~~~y~~gi 373 (506)
++++.+|....+.|+...|...|+++|
T Consensus 104 ~~~~~~a~~~~~~~~~~~A~~~~~~al 130 (136)
T 2fo7_A 104 EAWYNLGNAYYKQGDYDEAIEYYQKAL 130 (136)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 999999999999689999999999999
No 18
>2f2f_C CDT C, cytolethal distending toxin C; actinobacillus actinomycetemcomitans, oligomerization, stability and toxic activity; 2.40A {Aggregatibacter actinomycetemcomitans} SCOP: b.42.2.1
Probab=40.29 E-value=6.8 Score=15.74 Aligned_cols=26 Identities=23% Similarity=0.384 Sum_probs=10.5
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 912789999999999973677311257887
Q T0532 1 MKRINKYISLLLATALLASCDKFDEINTDP 30 (506)
Q Consensus 1 MKki~~~i~~~~~~~~~tSC~dfld~n~dp 30 (506)
|||+. | ++++.+.++|+...+-+.+|
T Consensus 1 mkK~~--i--~f~~~l~~~~~s~~~~~~~P 26 (186)
T 2f2f_C 1 MKKYL--L--SFLLSMILTLTSHAESNPDP 26 (186)
T ss_dssp ----------------------------CC
T ss_pred CCHHH--H--HHHHHHHHHCCCCCCCCCCC
T ss_conf 93237--9--99999997512455468997
No 19
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1
Probab=34.62 E-value=15 Score=13.78 Aligned_cols=30 Identities=30% Similarity=0.325 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 899999999998578982379999999999
Q T0532 346 AEQNFILAEAAVRGWISGDASAYYKKAIRA 375 (506)
Q Consensus 346 AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~ 375 (506)
||+|+.++++..+.|+-..|...|++.++.
T Consensus 9 ~~~y~~lg~~~~~~~~~~~A~~~~~~~~~~ 38 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 38 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 999999999999968999999999999876
No 20
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=30.17 E-value=18 Score=13.34 Aligned_cols=31 Identities=29% Similarity=0.294 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 6899999999998578982379999999999
Q T0532 345 YAEQNFILAEAAVRGWISGDASAYYKKAIRA 375 (506)
Q Consensus 345 ~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~ 375 (506)
.||+++.++..+.+.++-..|...|+..++.
T Consensus 8 ~a~a~~~lg~~~~~~~~~~~A~~~~~~~~~~ 38 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 38 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 6999999999999968999999999999874
No 21
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=28.39 E-value=19 Score=13.16 Aligned_cols=31 Identities=16% Similarity=-0.117 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 6899999999998578982379999999999
Q T0532 345 YAEQNFILAEAAVRGWISGDASAYYKKAIRA 375 (506)
Q Consensus 345 ~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~ 375 (506)
.+++++.+|.+..+.|....|..+|+++|+.
T Consensus 50 ~~~a~~~lg~~~~~~g~~~~Ai~~~~~al~~ 80 (121)
T 1hxi_A 50 REEAWRSLGLTQAENEKDGLAIIALNHARML 80 (121)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 9999999729999948857677889999986
No 22
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=27.40 E-value=20 Score=13.05 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 6899999999998578982379999999999
Q T0532 345 YAEQNFILAEAAVRGWISGDASAYYKKAIRA 375 (506)
Q Consensus 345 ~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~ 375 (506)
.++.++.+|.+....|+...|..+|+++|+.
T Consensus 6 ~~~a~~~lg~~~~~~g~~~~Ai~~~~~ai~~ 36 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVET 36 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf 5999999999999959999999999987724
No 23
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=24.72 E-value=22 Score=12.76 Aligned_cols=30 Identities=13% Similarity=-0.010 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 899999999998578982379999999999
Q T0532 346 AEQNFILAEAAVRGWISGDASAYYKKAIRA 375 (506)
Q Consensus 346 AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~ 375 (506)
+++++.+|.+..+.|+...|..+|+++|+.
T Consensus 19 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 48 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDF 48 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 999999999999859989999999999987
No 24
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=24.23 E-value=23 Score=12.70 Aligned_cols=29 Identities=21% Similarity=0.157 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 89999999999857898237999999999
Q T0532 346 AEQNFILAEAAVRGWISGDASAYYKKAIR 374 (506)
Q Consensus 346 AEv~ll~AEA~~r~g~~~~A~~~y~~gi~ 374 (506)
+++++.++-+..+.|+...|...|+++++
T Consensus 35 ~~a~~~lG~~~~~~g~~~~Ai~~~~kAl~ 63 (99)
T 2kc7_A 35 DEAYYLMGNAYRKLGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999866186621529999999999997
No 25
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=21.96 E-value=15 Score=13.82 Aligned_cols=20 Identities=40% Similarity=0.537 Sum_probs=8.3
Q ss_pred CCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9127899999999999736773
Q T0532 1 MKRINKYISLLLATALLASCDK 22 (506)
Q Consensus 1 MKki~~~i~~~~~~~~~tSC~d 22 (506)
|| ++++++++++ +++.||..
T Consensus 1 m~-~~~~~~~~~~-l~~~~~~~ 20 (375)
T 2w5v_A 1 MK-LKKIVFTLIA-LGLFSCKT 20 (375)
T ss_dssp ----------------------
T ss_pred CC-CHHHHHHHHH-HHHHHHHH
T ss_conf 97-0799999999-99999764
No 26
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=20.61 E-value=16 Score=13.56 Aligned_cols=12 Identities=25% Similarity=0.232 Sum_probs=6.6
Q ss_pred CCHHHHHHHHHH
Q ss_conf 912789999999
Q T0532 1 MKRINKYISLLL 12 (506)
Q Consensus 1 MKki~~~i~~~~ 12 (506)
|||.+++.+.++
T Consensus 2 ~k~~~~~~~~~~ 13 (395)
T 2jep_A 2 FKKWKKFGISSL 13 (395)
T ss_dssp ------------
T ss_pred CHHHHHHHHHHH
T ss_conf 188999999999
No 27
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=20.04 E-value=28 Score=12.20 Aligned_cols=37 Identities=22% Similarity=0.014 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 1526899999999998578982379999999999999
Q T0532 342 RLGYAEQNFILAEAAVRGWISGDASAYYKKAIRAHME 378 (506)
Q Consensus 342 ~~r~AEv~ll~AEA~~r~g~~~~A~~~y~~gi~~s~~ 378 (506)
+-+.||.||-.||-.+.-|+.-.|-.-|-+++...+.
T Consensus 3 ~~~~Ae~yl~EA~e~L~KGD~vQASEK~ykAaee~VK 39 (129)
T 2jpu_A 3 ISTSAEVYYEEAEEFLSKGDLVQACEKYYKAAEEAIK 39 (129)
T ss_dssp SSCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 5878999999999999646888888999999999999
No 28
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2fi7_A
Probab=20.01 E-value=28 Score=12.19 Aligned_cols=29 Identities=14% Similarity=0.100 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 89999999999857898237999999999
Q T0532 346 AEQNFILAEAAVRGWISGDASAYYKKAIR 374 (506)
Q Consensus 346 AEv~ll~AEA~~r~g~~~~A~~~y~~gi~ 374 (506)
.++++.+|+.+.+.|+...|..+|++.++
T Consensus 175 ~~~~~~la~~~~~~~~~~~A~~~l~~~~~ 203 (252)
T 2ho1_A 175 PSVALEMADLLYKEREYVPARQYYDLFAQ 203 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999999986999999999999985
Done!