Query T0535 FGD5, Homo sapiens, 294 residues
Match_columns 294
No_of_seqs 122 out of 2258
Neff 9.9
Searched_HMMs 22458
Date Fri May 21 18:05:14 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/hhm/T0535.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/hhm/T0535.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ky9_A Proto-oncogene VAV; cal 100.0 0 0 337.9 29.1 283 2-294 196-505 (587)
2 2vrw_B P95VAV, VAV1, proto-onc 100.0 0 0 331.0 33.7 282 2-294 24-333 (406)
3 2pz1_A RHO guanine nucleotide 100.0 0 0 324.3 33.7 288 2-294 117-438 (466)
4 2dfk_A Collybistin II; DH doma 100.0 0 0 317.9 34.1 288 2-294 40-361 (402)
5 3ksy_A SOS-1, SON of sevenless 100.0 0 0 325.2 25.8 285 4-293 201-543 (1049)
6 2z0q_A XPLN, RHO guanine nucle 100.0 0 0 320.6 27.6 286 2-294 18-344 (346)
7 1xcg_A PDZ-rhogef, RHO guanine 100.0 0 0 301.2 33.6 288 2-294 20-364 (368)
8 1txd_A RHO guanine nucleotide 100.0 0 0 298.8 32.3 287 2-294 23-367 (385)
9 1dbh_A Protein (human SOS 1); 100.0 0 0 298.7 27.1 287 2-293 2-346 (354)
10 1foe_A T-lymphoma invasion and 100.0 8.4E-45 0 290.4 31.4 287 2-294 10-364 (377)
11 3jzy_A Intersectin 2; C2 domai 100.0 0 0 324.6 0.0 289 1-294 25-360 (510)
12 2rgn_B RHOA/RAC/CDC42 exchange 100.0 2.8E-45 0 293.8 24.9 283 2-294 11-316 (354)
13 1kz7_A Guanine nucleotide exch 100.0 1.3E-44 0 289.2 24.2 285 2-294 10-323 (353)
14 1nty_A Triple functional domai 100.0 1.6E-41 1.4E-45 270.3 29.6 279 2-294 8-306 (311)
15 3gf9_A Intersectin 2; structur 100.0 1.4E-35 6.4E-40 234.0 20.1 183 2-189 97-290 (295)
16 1by1_A Protein (PIX); RHO-GTPa 100.0 1.1E-34 4.7E-39 228.7 14.7 180 1-188 11-198 (209)
17 1zc3_B Exocyst complex protein 99.4 2.8E-12 1.2E-16 91.6 9.5 90 205-294 1-105 (113)
18 1v61_A RAC/CDC42 guanine nucle 99.1 1.9E-10 8.3E-15 80.5 8.4 89 206-294 22-124 (132)
19 1fho_A UNC-89; pleckstrin homo 99.1 4.4E-11 2E-15 84.3 5.2 91 203-294 2-110 (119)
20 2q13_A DCC-interacting protein 98.0 0.0006 2.7E-08 40.7 20.5 81 212-294 278-373 (385)
21 2dhk_A TBC1 domain family memb 97.6 0.00011 4.7E-09 45.3 6.7 71 224-294 25-102 (119)
22 2cof_A Protein KIAA1914; PH do 97.6 0.00026 1.2E-08 42.9 7.9 81 214-294 10-99 (107)
23 1dyn_A Dynamin; signal transdu 97.6 0.00046 2.1E-08 41.4 9.0 82 211-294 11-115 (125)
24 1w1g_A HPDK1, 3-phosphoinositi 97.5 0.00075 3.3E-08 40.1 9.4 96 194-293 35-136 (151)
25 2i5f_A Pleckstrin; PH domain, 97.5 0.00023 1E-08 43.2 6.6 85 210-294 5-107 (109)
26 1btk_A Bruton'S tyrosine kinas 97.5 0.00085 3.8E-08 39.8 9.3 33 262-294 97-130 (169)
27 2dkp_A Pleckstrin homology dom 97.4 0.00053 2.4E-08 41.0 7.9 85 208-294 17-117 (128)
28 1wg7_A Dedicator of cytokinesi 97.4 0.00067 3E-08 40.4 8.2 87 207-294 13-122 (150)
29 2coc_A FYVE, rhogef and PH dom 97.4 0.00028 1.2E-08 42.7 6.0 81 213-294 9-104 (112)
30 2yry_A Pleckstrin homology dom 97.4 0.00056 2.5E-08 40.9 7.5 86 207-294 17-118 (122)
31 2d9y_A Pleckstrin homology dom 97.4 0.00089 4E-08 39.6 8.4 83 211-294 10-107 (117)
32 3feh_A Centaurin-alpha-1; stru 97.3 0.00086 3.8E-08 39.7 7.7 83 210-294 267-370 (386)
33 1upq_A PEPP1; PH domain, phosp 97.3 0.0007 3.1E-08 40.3 6.9 86 207-294 6-107 (123)
34 1u5f_A SRC-associated adaptor 97.3 0.0011 4.7E-08 39.2 7.8 83 210-294 15-117 (148)
35 2da0_A 130-kDa phosphatidylino 97.2 0.00066 3E-08 40.4 6.7 68 224-294 26-99 (114)
36 1eaz_A Tandem PH domain contai 97.2 0.00065 2.9E-08 40.5 6.5 85 208-294 10-109 (125)
37 2cod_A Centaurin-delta 1; ARF 97.2 0.0008 3.6E-08 39.9 6.8 84 209-294 5-97 (115)
38 1wgq_A FYVE, rhogef and PH dom 97.2 0.0013 5.8E-08 38.6 7.9 82 212-294 8-101 (109)
39 1u5e_A SRC-associated adaptor 97.2 0.00081 3.6E-08 39.9 6.5 83 210-294 104-206 (211)
40 1v89_A Hypothetical protein KI 97.2 0.0013 5.7E-08 38.7 7.4 81 212-294 8-110 (118)
41 2dtc_A RAL guanine nucleotide 97.1 0.0027 1.2E-07 36.7 8.9 72 223-294 22-110 (126)
42 2dn6_A KIAA0640 protein; PH do 97.1 0.0019 8.3E-08 37.7 8.0 82 211-294 7-101 (115)
43 1pls_A Pleckstrin homology dom 97.1 0.0014 6.1E-08 38.5 7.3 81 212-294 5-99 (113)
44 3cxb_B Pleckstrin homology dom 97.1 0.0015 6.9E-08 38.2 7.5 74 220-294 15-99 (112)
45 3a8p_A T-lymphoma invasion and 97.1 0.0017 7.4E-08 38.0 7.5 73 222-294 36-122 (263)
46 1v5p_A Pleckstrin homology dom 97.1 0.002 8.9E-08 37.5 7.9 71 223-294 30-118 (126)
47 1x1g_A Pleckstrin 2; PH domain 97.1 0.00074 3.3E-08 40.1 5.4 89 206-294 12-122 (129)
48 2d9v_A Pleckstrin homology dom 97.1 0.0024 1.1E-07 37.0 8.0 85 210-294 6-112 (130)
49 1u5d_A SKAP55, SRC kinase-asso 97.1 0.0011 4.7E-08 39.2 6.2 69 224-294 22-103 (108)
50 1x1f_A Signal-transducing adap 97.0 0.0018 7.9E-08 37.8 7.0 81 212-294 18-111 (149)
51 2j59_M RHO-GTPase activating p 97.0 0.0028 1.2E-07 36.6 7.8 72 223-294 27-109 (168)
52 1fao_A Dual adaptor of phospho 97.0 0.0025 1.1E-07 36.9 7.5 80 213-294 19-110 (126)
53 2r09_A Cytohesin-3; autoinhibi 96.9 0.0019 8.3E-08 37.7 6.5 80 213-294 214-326 (347)
54 2ys3_A UNC-112-related protein 96.9 0.0011 4.8E-08 39.1 5.1 72 223-294 26-110 (137)
55 2d9x_A Oxysterol binding prote 96.9 0.0013 6E-08 38.6 5.3 83 212-294 8-102 (120)
56 1v5u_A SBF1, SET binding facto 96.9 0.0056 2.5E-07 34.8 8.5 83 211-294 7-109 (117)
57 2dhi_A Evectin-2, pleckstrin h 96.8 0.0032 1.4E-07 36.2 7.0 85 210-294 6-112 (120)
58 1x05_A Pleckstrin; PH domain, 96.8 0.002 9.1E-08 37.4 6.0 85 210-294 16-118 (129)
59 2w2x_D 1-phosphatidylinositol- 96.8 0.0026 1.2E-07 36.8 6.4 82 213-294 13-117 (124)
60 2d9w_A Docking protein 2; PH d 96.8 0.0034 1.5E-07 36.1 6.9 83 212-294 12-119 (127)
61 2kcj_A Pleckstrin homology dom 96.8 0.0012 5.5E-08 38.8 4.6 82 213-294 8-99 (108)
62 1v88_A Oxysterol binding prote 96.8 0.0031 1.4E-07 36.3 6.6 81 212-294 8-122 (130)
63 2p0d_A RHO GTPase-activating p 96.7 0.0045 2E-07 35.3 7.2 36 259-294 85-122 (129)
64 1wi1_A Calcium-dependent activ 96.7 0.0058 2.6E-07 34.7 7.4 32 263-294 76-108 (126)
65 1v5m_A SH2 and PH domain-conta 96.7 0.0019 8.3E-08 37.7 4.8 34 261-294 93-128 (136)
66 1unq_A RAC-alpha serine/threon 96.6 0.0063 2.8E-07 34.4 7.4 84 210-294 6-108 (125)
67 2coa_A Protein kinase C, D2 ty 96.6 0.0037 1.6E-07 35.9 5.9 82 211-294 7-117 (125)
68 1btn_A Beta-spectrin; signal t 96.6 0.016 6.9E-07 32.1 9.0 73 222-294 20-106 (106)
69 1qqg_A IRS-1, insulin receptor 96.4 0.01 4.5E-07 33.2 7.4 35 260-294 75-110 (264)
70 1wjm_A Beta-spectrin III; PH d 96.4 0.0061 2.7E-07 34.5 5.9 72 223-294 30-115 (123)
71 3a8n_A TIAM-1, T-lymphoma inva 96.3 0.003 1.3E-07 36.4 4.1 73 222-294 36-122 (279)
72 2rov_A RHO-associated protein 96.3 0.0042 1.9E-07 35.5 4.6 34 261-294 73-113 (117)
73 1fgy_A GRP1; PH domain, signal 96.2 0.018 8E-07 31.7 7.5 25 270-294 94-118 (127)
74 2d9z_A Protein kinase C, NU ty 96.0 0.015 6.5E-07 32.2 6.5 82 211-294 7-121 (129)
75 2rlo_A Centaurin-gamma 1; spli 95.4 0.018 8E-07 31.7 4.8 33 262-294 88-122 (128)
76 1dro_A Beta-spectrin; cytoskel 94.9 0.027 1.2E-06 30.6 4.6 73 222-294 29-117 (122)
77 2adz_A Alpha-1-syntrophin; pro 87.2 0.86 3.8E-05 21.4 5.0 35 259-293 137-174 (178)
78 1mai_A Phospholipase C delta-1 83.5 1.5 6.9E-05 19.8 6.5 32 261-292 83-117 (131)
79 3hie_A Protein PSL1, exocyst c 60.9 5.7 0.00025 16.4 8.2 55 239-293 86-145 (171)
80 2fjl_A 1-phosphatidylinositol- 54.6 7.2 0.00032 15.7 4.0 32 263-294 111-146 (150)
81 3f1i_H Hepatocyte growth facto 38.0 13 0.00059 14.1 5.7 53 16-71 3-56 (98)
82 3a58_A Exocyst complex compone 24.0 23 0.001 12.7 8.0 53 241-293 158-215 (320)
No 1
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckstrin homology domain, C1 domain, acetylation; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=100.00 E-value=0 Score=337.91 Aligned_cols=283 Identities=16% Similarity=0.225 Sum_probs=240.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 068999999999999999768999-9999998731024566789889988712888999998999999998862478750
Q T0535 2 SRALVIAQELLSSEKAYVELQHLN-LDFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWESQQ 80 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~-~~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~~~ 80 (294)
.||.+||+||++||++||+.|.++ ..|+.||.. +++++++..||+||++|+.+|+.|+.+|+++...|.. .
T Consensus 196 ~kR~~vi~Ell~TE~~YV~~L~~l~~~y~~pL~~-------~l~~~~i~~IF~ni~eI~~~h~~fL~~Le~~~~~~~~-~ 267 (587)
T 3ky9_A 196 DKRCCCLREIQQTEEKYTDTLGSIQQHFLKPLQR-------FLKPQDIEIIFINIEDLLRVHTHFLKEMKEALGTPGA-A 267 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHT-------TSCTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSSTT-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC-C
T ss_conf 9999999999999999999999999999999871-------0999999999748999999999999999998769862-6
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 18999999875557-88998600789999999985009999999998------627802567788876447789999986
Q T0535 81 KVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREF------EQSTAKHRLLRVVQRLFQYQVLLTDYL 153 (294)
Q Consensus 81 ~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~------~~~~l~~~L~~PiQRl~kY~lLl~~ll 153 (294)
.+|++|+.+.++|. |..||.|++.+...+.++.+.++.|..++.++ .+++|.++|++|+||++||+|||++|+
T Consensus 268 ~ig~~Fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRl~rY~LLL~eLl 347 (587)
T 3ky9_A 268 NLYQVFIKYKERFLVYGRYCSQVESASKHLDRVAAAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQELV 347 (587)
T ss_dssp SHHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHHHTCHHHHTTTTHHHHHHHSSSCCHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999888889999999819999999999987468899999999658325787889999888877889999999999
Q ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCC----CCCCEE
Q ss_conf 427898836799999999999999999888876-678999999862044210002144543346431234----542002
Q T0535 154 NNLCPDSAEYDNTQGALSLISKVTDRANDSEQG-ENLQKLVHIEHSVRGQGDLLQPGREFLKEGTLKVTG----KNRRPR 228 (294)
Q Consensus 154 k~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~-~~~~~~~~~~~~~~~~~~l~~~~r~~i~~g~~~~~~----~~~~~~ 228 (294)
|+|| +|||+..|+.|++.++.++..+|+.++. ++..++.+++..+.+++..+...++++++|.+.+.. +...++
T Consensus 348 K~Tp-d~~D~~~L~~Al~~ik~v~~~iNe~~r~~E~~~~l~~l~~~i~~~~~~l~~~grll~~G~~~v~~~~~~~~~~r~ 426 (587)
T 3ky9_A 348 KHTQ-EAMEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENLDQSLAHYGRPKIDGELKITSVERRSKMDRY 426 (587)
T ss_dssp HTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEETCCSCGGGGCCEEEEEEEEEECSSCCSCEEEE
T ss_pred HHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEE
T ss_conf 6099-753689999999999999999999998778999999999863366443256871799811367631689843689
Q ss_pred EEEECCEEEEEEEECCCEEEEEEEEEECCC-----------CCCCCCEEEEEEC---CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 565155379998614872787556641225-----------5667601788708---38999818989999999999719
Q T0535 229 HLFLNDVLLYTYPQKDGKYRLKNTLAVSRP-----------VEKVPYALKIETS---ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 229 ~fLf~D~li~~k~~~~~~~~~~~~i~l~~~-----------~~~~~~~f~i~~~---~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+|||+|+||+|+++ ++.|.++..+++... ....++.|.+... ++|+|+|.|.++|+.|+++|++|
T Consensus 427 ~fLF~d~Ll~~K~k-~~~~~~k~~i~L~~~~v~~~~~~~~d~~~~~~~f~i~~~~~~~sf~l~a~s~eek~~W~~~i~~a 505 (587)
T 3ky9_A 427 AFLLDKALLICKRR-GDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMA 505 (587)
T ss_dssp EEEETTEEEEEEEE-TTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEEC-CCCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 99508889999853-88530013888363478866766666766670599997799948999979999999999999999
No 2
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, polymorphism, metal-binding, phosphoprotein, exchange factor, RAC, zinc, GTPase; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=100.00 E-value=0 Score=331.02 Aligned_cols=282 Identities=17% Similarity=0.266 Sum_probs=237.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 0689999999999999997689999-999998731024566789889988712888999998999999998862478750
Q T0535 2 SRALVIAQELLSSEKAYVELQHLNL-DFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWESQQ 80 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~~-~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~~~ 80 (294)
+||.+||+||++||++||+.|.++. .|+.|+. .++++++++.||+|+++|+.+|+.|+.+|+++..+|. ..
T Consensus 24 ~kR~~vi~Eli~TE~~Yv~~L~~l~~~f~~~l~-------~~~~~~~~~~iF~ni~~i~~~h~~~l~~L~~~~~~~~-~~ 95 (406)
T 2vrw_B 24 DKRCCCLREIQQTEEKYTDTLGSIQQHFMKPLQ-------RFLKPQDMETIFVNIEELFSVHTHFLKELKDALAGPG-AT 95 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHT-------TTSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSGG-GT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC-CC
T ss_conf 999999999999999999999999999999998-------5199999999974899999999999999999870896-13
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 18999999875557-889986007899999999850099999999986------27802567788876447789999986
Q T0535 81 KVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREFE------QSTAKHRLLRVVQRLFQYQVLLTDYL 153 (294)
Q Consensus 81 ~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~~------~~~l~~~L~~PiQRl~kY~lLl~~ll 153 (294)
.+|++|+.+.++|. |..||.++..+...+.++.+.++.|..++++++ +++|.++|++|+||++||+|||++|+
T Consensus 96 ~i~~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~~~~~~~~~~~~~l~L~~~L~~PvQRl~rY~LLL~~ll 175 (406)
T 2vrw_B 96 TLYQVFIKYKERFLVYGRYCSQVESASKHLDQVATAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQELV 175 (406)
T ss_dssp THHHHHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSCCHHHHTTHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999988889999999805999999999986268899999998705103788879999998877879999999997
Q ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCH-HCCCCCCCCCCCCCCCC---CCC-CCE
Q ss_conf 427898836799999999999999999888876-678999999862044210-00214454334643123---454-200
Q T0535 154 NNLCPDSAEYDNTQGALSLISKVTDRANDSEQG-ENLQKLVHIEHSVRGQGD-LLQPGREFLKEGTLKVT---GKN-RRP 227 (294)
Q Consensus 154 k~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~-~~~~~~~~~~~~~~~~~~-l~~~~r~~i~~g~~~~~---~~~-~~~ 227 (294)
|+|| +|||+.+++.|++.++.++..+|+..+. ++..++.+++..+.+.+. +..++| ++.+|.+.+. +++ ..+
T Consensus 176 k~T~-~~~d~~~l~~a~~~i~~v~~~vne~~~~~e~~~~l~~i~~~i~~~~~~l~~~~r-~~~~g~~~~~~~~~k~~~~r 253 (406)
T 2vrw_B 176 KHTQ-DATEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENLDQSLANYGR-PKIDGELKITSVERRSKTDR 253 (406)
T ss_dssp HHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEESCSSCGGGGCS-EEEEEEEEEECSSCCSCEEE
T ss_pred HCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCEE
T ss_conf 2599-813189999999999999999989999988999999999863267533333566-43223201220257987336
Q ss_pred EEEEECCEEEEEEEECCCEEEEEEEEEECC-----------CCCCCCCEEEEEE---CCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 256515537999861487278755664122-----------5566760178870---83899981898999999999971
Q T0535 228 RHLFLNDVLLYTYPQKDGKYRLKNTLAVSR-----------PVEKVPYALKIET---SESCLLSASSCAERDEWYGCLSR 293 (294)
Q Consensus 228 ~~fLf~D~li~~k~~~~~~~~~~~~i~l~~-----------~~~~~~~~f~i~~---~~~~~l~a~s~~ek~~W~~~i~~ 293 (294)
++|||||+||+|+++ ++.|.++..+++.. +....++.|.+.. .++++|+|.|+++|+.|+++|++
T Consensus 254 ~~fLFnD~Ll~~k~~-~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~sf~l~a~s~eek~~W~~~i~~ 332 (406)
T 2vrw_B 254 YAFLLDKALLICKRR-GDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEM 332 (406)
T ss_dssp EEEEESSEEEEEEEE-TTEEEEEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEEEC-CCCCCCCEEEEECCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHH
T ss_conf 899846879999721-7753000378733268896366666776564699999779980799993899999999999999
Q ss_pred C
Q ss_conf 9
Q T0535 294 A 294 (294)
Q Consensus 294 A 294 (294)
|
T Consensus 333 a 333 (406)
T 2vrw_B 333 A 333 (406)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 3
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protein; 2.25A {Homo sapiens} PDB: 2dx1_A
Probab=100.00 E-value=0 Score=324.26 Aligned_cols=288 Identities=18% Similarity=0.299 Sum_probs=241.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC-
Q ss_conf 0689999999999999997689-99999999873102456678988998871288899999899999999886247875-
Q T0535 2 SRALVIAQELLSSEKAYVELQH-LNLDFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWESQ- 79 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~-l~~~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~~- 79 (294)
++|-.||+||++||++||++|. ++..|+.|+... .++++.+++..||+|+++|+.+|+.|+..|+.+...+...
T Consensus 117 ~~R~~vI~ELi~TE~~Yv~~L~~l~~~y~~pl~~~----~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~~~~~~~ 192 (466)
T 2pz1_A 117 QMRTNVINEILSTERDYIKHLRDICEGYVRQCRKR----ADMFSEEQLRTIFGNIEDIYRCQKAFVKALEQRFNRERPHL 192 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHC----TTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999999855878744----57999899999971699999999999999999984279743
Q ss_pred CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 018999999875557-889986007899999999850099999999986------2780256778887644778999998
Q T0535 80 QKVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREFE------QSTAKHRLLRVVQRLFQYQVLLTDY 152 (294)
Q Consensus 80 ~~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~~------~~~l~~~L~~PiQRl~kY~lLl~~l 152 (294)
..||++|+.+.++|. |..||.+++.+...+.++.+ ++.|..++..++ .+++.++|++|+||++||++||++|
T Consensus 193 ~~Ig~~fl~~~~~f~~Y~~Y~~~~~~a~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~L~s~L~~PvQRi~kY~lLL~eL 271 (466)
T 2pz1_A 193 SELGACFLEHQADFQIYSEYCNNHPNACVELSRLTK-LSKYVYFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAEL 271 (466)
T ss_dssp CCCHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 279999998677779999999807999999999974-0578999999873610145787999867764455679999999
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCC--CHHCCCCCCCCCCCCCCCCCC----CC
Q ss_conf 6427898836799999999999999999888876-6789999998620442--100021445433464312345----42
Q T0535 153 LNNLCPDSAEYDNTQGALSLISKVTDRANDSEQG-ENLQKLVHIEHSVRGQ--GDLLQPGREFLKEGTLKVTGK----NR 225 (294)
Q Consensus 153 lk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~-~~~~~~~~~~~~~~~~--~~l~~~~r~~i~~g~~~~~~~----~~ 225 (294)
+++||++|||+..++.|+..++.++..||+.++. ++..++.+++..+.++ ..++..+|.++++|.+..... +.
T Consensus 272 lk~T~~~h~d~~~l~~Al~~~~~v~~~ine~~r~~e~~~~l~~l~~~i~~~~~~~l~~~~r~li~~g~l~~~~~~~~k~~ 351 (466)
T 2pz1_A 272 LKYTHPQHRDFKDVEAALHAMKNVAQLINERKRRLENIDKIAQWQSSIEDWEGEDLLVRSSELIYSGELTRVTQPQAKSQ 351 (466)
T ss_dssp HHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSBTCCSSCHHHHCSCEEEEEEEEEECTTTCCEE
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
T ss_conf 97448898329999999999999999999999999819999999975125656410035761110142799823678762
Q ss_pred CEEEEEECCEEEEEEEEC--CCEEEEEEEEEECCCC-------------CCCCCEEEEEE---CCEEEEEECCHHHHHHH
Q ss_conf 002565155379998614--8727875566412255-------------66760178870---83899981898999999
Q T0535 226 RPRHLFLNDVLLYTYPQK--DGKYRLKNTLAVSRPV-------------EKVPYALKIET---SESCLLSASSCAERDEW 287 (294)
Q Consensus 226 ~~~~fLf~D~li~~k~~~--~~~~~~~~~i~l~~~~-------------~~~~~~f~i~~---~~~~~l~a~s~~ek~~W 287 (294)
.+.+|||+|+||+|++.. ...+.++..+++.... ...+++|.|.. .+.++|+|.|.++|+.|
T Consensus 352 ~r~~fLF~d~ll~~k~~~~~~~~~~~k~~i~l~~l~v~~~~d~~~~~~~~~~~~~f~i~~~~~~~~~~l~a~s~eek~~W 431 (466)
T 2pz1_A 352 QRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRW 431 (466)
T ss_dssp EEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHH
T ss_pred EEEEEEECCEEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCHHHHHHH
T ss_conf 38999833606899711578861799999874760899898987554333355138999789996899998999999999
Q ss_pred HHHHHHC
Q ss_conf 9999719
Q T0535 288 YGCLSRA 294 (294)
Q Consensus 288 ~~~i~~A 294 (294)
+++|++|
T Consensus 432 ~~~i~~~ 438 (466)
T 2pz1_A 432 LKAFARE 438 (466)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999999
No 4
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=0 Score=317.90 Aligned_cols=288 Identities=18% Similarity=0.276 Sum_probs=242.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC-C
Q ss_conf 068999999999999999768999-99999987310245667898899887128889999989999999988624787-5
Q T0535 2 SRALVIAQELLSSEKAYVELQHLN-LDFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWES-Q 79 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~-~~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~-~ 79 (294)
++|..||+||++||++||++|.++ ..|+.|+... .++++.++++.||+||++|+++|+.|+..|+.+..+++. .
T Consensus 40 ~~R~~vi~Ell~TE~~Yv~~L~~l~~~f~~~l~~~----~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~~~ 115 (402)
T 2dfk_A 40 QMRANVINEIMSTERHYIKHLKDICEGYLKQCRKR----RDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNNDDPHL 115 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHC----TTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 99999999999999999999999999999999866----79999999999984899999999999999999872799605
Q ss_pred CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 018999999875557-889986007899999999850099999999986------2780256778887644778999998
Q T0535 80 QKVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREFE------QSTAKHRLLRVVQRLFQYQVLLTDY 152 (294)
Q Consensus 80 ~~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~~------~~~l~~~L~~PiQRl~kY~lLl~~l 152 (294)
..||++|+.+.+.|. |..||.+++.+...+.++. +++.|..|++.++ +.++.++|++|+||++||++||++|
T Consensus 116 ~~ig~~f~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~-~~~~f~~f~~~~~~~~~~~~~~l~~~L~~PvqRl~rY~lLL~~l 194 (402)
T 2dfk_A 116 SEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLM-KDSRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAEL 194 (402)
T ss_dssp CCCHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHT-TSHHHHHHHHHHHHHTTCCSCCHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH-CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 38999999976778898998807720899999985-35688999999873811146885899999999999869999999
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCC--CHHCCCCCCCCCCCCCCCCC----CCC
Q ss_conf 6427898836799999999999999999888876-6789999998620442--10002144543346431234----542
Q T0535 153 LNNLCPDSAEYDNTQGALSLISKVTDRANDSEQG-ENLQKLVHIEHSVRGQ--GDLLQPGREFLKEGTLKVTG----KNR 225 (294)
Q Consensus 153 lk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~-~~~~~~~~~~~~~~~~--~~l~~~~r~~i~~g~~~~~~----~~~ 225 (294)
+++||++|||+..+..|++.++.++..+|+..+. +...++.+++..+.+. ..++.++|.++++|.+.... ++.
T Consensus 195 ~k~t~~~~~d~~~L~~a~~~i~~~~~~in~~~~~~e~~~~l~~l~~~i~~~~~~~l~~~~r~~i~~g~l~~~~~~~~~~~ 274 (402)
T 2dfk_A 195 LKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGDDILDRSSELIYTGEMAWIYQPYGRNQ 274 (402)
T ss_dssp HHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSBTCCSSCGGGTCCCEEEEEEEEEESSTTCCCE
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEECCCCCCC
T ss_conf 71068886249999999999999999999999998855459999975103555420024540000143035413677774
Q ss_pred CEEEEEECCEEEEEEEEC--CCEEEEEEEEEECCCC-------------CCCCCEEEEEEC---CEEEEEECCHHHHHHH
Q ss_conf 002565155379998614--8727875566412255-------------667601788708---3899981898999999
Q T0535 226 RPRHLFLNDVLLYTYPQK--DGKYRLKNTLAVSRPV-------------EKVPYALKIETS---ESCLLSASSCAERDEW 287 (294)
Q Consensus 226 ~~~~fLf~D~li~~k~~~--~~~~~~~~~i~l~~~~-------------~~~~~~f~i~~~---~~~~l~a~s~~ek~~W 287 (294)
.+++|||+|+||+|+++. .+.+.++..+++.... ...+++|.|... +.++++|.|.+||+.|
T Consensus 275 ~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~l~a~s~~ek~~W 354 (402)
T 2dfk_A 275 QRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRW 354 (402)
T ss_dssp EEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHH
T ss_pred EEEEEEECCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEECCHHHHHHH
T ss_conf 02566633537889735667763488778755654899930788654454457635998679985999994999999999
Q ss_pred HHHHHHC
Q ss_conf 9999719
Q T0535 288 YGCLSRA 294 (294)
Q Consensus 288 ~~~i~~A 294 (294)
+++|++|
T Consensus 355 ~~~i~~~ 361 (402)
T 2dfk_A 355 LRAFREE 361 (402)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999999
No 5
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=100.00 E-value=0 Score=325.21 Aligned_cols=285 Identities=17% Similarity=0.214 Sum_probs=233.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC---C
Q ss_conf 8999999999999999768999-99999987310245667898899887128889999989999999988624787---5
Q T0535 4 ALVIAQELLSSEKAYVELQHLN-LDFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWES---Q 79 (294)
Q Consensus 4 ~~~ii~Eli~tE~~Yv~~l~l~-~~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~---~ 79 (294)
..-||+||++||++||++|.++ +.|+.|+... .++++.++++.||+||++|+.+|+.|+..|+++++.|+. .
T Consensus 201 y~eVV~ELi~TE~~YV~~L~~li~~F~~pL~~~----~~ils~~~i~~IF~NIe~I~~lh~~fL~~Le~~~e~~~~~~~~ 276 (1049)
T 3ksy_A 201 YYDLVKAFMAEIRQYIRELNLIIKVFREPFVSN----SKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPH 276 (1049)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHC----TTTSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHCCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 999999999999999999999999999999757----7999999999997589999999999999999998562458874
Q ss_pred CHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH------HHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 01899999987555---788998600789999999985--0099999999------986278025677888764477899
Q T0535 80 QKVADVFLAREQGF---DHHAHILQFDRYLGLLSENCL--HSPRLAAAVR------EFEQSTAKHRLLRVVQRLFQYQVL 148 (294)
Q Consensus 80 ~~i~~~f~~~~~~~---~y~~y~~~~~~~~~~l~~~~~--~~~~f~~~~~------~~~~~~l~~~L~~PiQRl~kY~lL 148 (294)
+.+|+||.++.+.+ .|..||.|+..+...+..+.+ +...+..+.. .+.+.+|.+||++||||++||++|
T Consensus 277 ~~IGdiF~~l~~~l~F~vY~~Yc~n~~~a~~~l~~l~~l~k~~~~~~~~~~~~~~~~~~~l~L~s~Li~PvQRi~RY~LL 356 (1049)
T 3ksy_A 277 PLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFEL 356 (1049)
T ss_dssp CCCHHHHHHHHHTTTTSHHHHHHHHHHCTTHHHHHHTTSSSTTHHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 74999999876663460379999687989999999999731378899999986251013788689874689988889999
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHCCC--C
Q ss_conf 999864278988367999999999999999998888766-----------------------789999998620442--1
Q T0535 149 LTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSEQGE-----------------------NLQKLVHIEHSVRGQ--G 203 (294)
Q Consensus 149 l~~llk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~~-----------------------~~~~~~~~~~~~~~~--~ 203 (294)
|++|+++|| +|+|+..+++|+..++++...+|+..+.. ...++.+++..+.++ .
T Consensus 357 Lk~Llk~Tp-~h~D~~~L~~Al~~ik~l~~~ine~~~~~~~~~r~~e~~~~~~~~~~~~k~~~i~~l~eiq~~i~g~~~~ 435 (1049)
T 3ksy_A 357 LKQLEEKSE-DQEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDGWEGK 435 (1049)
T ss_dssp HHHHHHSCC-CHHHHHHHHHHHHHTHHHHHHHHHHTTSTTHHHHHHHHC-------------CCSHHHHHHHTSSSCCSS
T ss_pred HHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999997498-9605899999999999999999999999999988888876530012233367899999999743488766
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECC---------CEEEEEEEEEECC-------CCCCCCCEEE
Q ss_conf 00021445433464312345420025651553799986148---------7278755664122-------5566760178
Q T0535 204 DLLQPGREFLKEGTLKVTGKNRRPRHLFLNDVLLYTYPQKD---------GKYRLKNTLAVSR-------PVEKVPYALK 267 (294)
Q Consensus 204 ~l~~~~r~~i~~g~~~~~~~~~~~~~fLf~D~li~~k~~~~---------~~~~~~~~i~l~~-------~~~~~~~~f~ 267 (294)
++..++|.++++|.+...++++.+++|||+|+||+||++.. ..|.+++.+++.+ +.++.+|+|.
T Consensus 436 ~l~~~~r~fi~eG~L~k~~~~keR~~FLFnd~Lli~K~~~~~~~~~~~~~~~y~~K~~i~L~~~~I~d~~D~~~~knaF~ 515 (1049)
T 3ksy_A 436 DIGQCCNEFIMEGTLTRVGAKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFE 515 (1049)
T ss_dssp CGGGTCSCCCCEEEEEETTCSSCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSSSCCSEEE
T ss_pred CCCCCCCEEEEEEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCEEEE
T ss_conf 54467865899857898068816999831574788623444555456778614787677636767886899766751589
Q ss_pred EEE--CCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 870--83899981898999999999971
Q T0535 268 IET--SESCLLSASSCAERDEWYGCLSR 293 (294)
Q Consensus 268 i~~--~~~~~l~a~s~~ek~~W~~~i~~ 293 (294)
+.+ +.+++|+|.|.+||+.||++|.+
T Consensus 516 i~~~~~~~~~f~A~S~eEK~~Wms~L~~ 543 (1049)
T 3ksy_A 516 IILKDENSVIFSAKSAEEKNNWMAALIS 543 (1049)
T ss_dssp ECCTTSCCEEEECSSHHHHHHHHHHHHH
T ss_pred EECCCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 9648987699982988999999999987
No 6
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=100.00 E-value=0 Score=320.60 Aligned_cols=286 Identities=17% Similarity=0.235 Sum_probs=236.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 06899999999999999976899999-99998731024566789889988712888999998999999998862478750
Q T0535 2 SRALVIAQELLSSEKAYVELQHLNLD-FHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWESQQ 80 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~~~-~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~~~ 80 (294)
.||..||+||++||++||++|.++.+ |+.|+... ++++++++..||+|+++|+.+|+.|+..|+++...|....
T Consensus 18 ~kR~~~i~Eli~tE~~Yv~~L~~l~~~y~~~l~~~-----~~l~~~~~~~iF~ni~~I~~~h~~~l~~L~~~~~~~~~~~ 92 (346)
T 2z0q_A 18 IKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKL-----SIMTEQELNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTE 92 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHT-----TSSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCTTSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 99999999999999999999999999999999767-----9999999999986699999999999999999986059932
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 18999999875557-88998600789999999985009999999998------627802567788876447789999986
Q T0535 81 KVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREF------EQSTAKHRLLRVVQRLFQYQVLLTDYL 153 (294)
Q Consensus 81 ~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~------~~~~l~~~L~~PiQRl~kY~lLl~~ll 153 (294)
.+|++|..+.++|. |..||.||+.+...+..+. +++.|..+++++ .++++.++|++|+||++||++||++++
T Consensus 93 ~ig~~f~~~~~~~~~Y~~Y~~~~~~~~~~l~~~~-~~~~f~~~l~~~~~~~~~~~~~l~~~L~~PvqRl~rY~llL~~ll 171 (346)
T 2z0q_A 93 HVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKK-QDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREIL 171 (346)
T ss_dssp CCHHHHHHHGGGGGHHHHHHHHHHHHHHHHHHHT-TCHHHHCC-------------CTTTGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4899999874440589999837377899999875-226899999999819533578889999889999998999999997
Q ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCC-CCHHCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 427898836799999999999999999888876678-999999862044-210002144543346431234542002565
Q T0535 154 NNLCPDSAEYDNTQGALSLISKVTDRANDSEQGENL-QKLVHIEHSVRG-QGDLLQPGREFLKEGTLKVTGKNRRPRHLF 231 (294)
Q Consensus 154 k~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~~~~-~~~~~~~~~~~~-~~~l~~~~r~~i~~g~~~~~~~~~~~~~fL 231 (294)
++||++|||+..+++|++.+++++..||+..+..+. .....+.....+ ...+..++|.++++|.++. +++..+++||
T Consensus 172 k~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~~e~~~~~~~l~~~~~~~~~~l~~~~R~li~~G~l~~-~~~~~~~~fL 250 (346)
T 2z0q_A 172 RHTPNDNPDQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKN-NRGVKLHVFL 250 (346)
T ss_dssp HTSCTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCSTTCCCHHHHTCCCEEEEEEEEE-TTSCEEEEEE
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECEEEC-CCCCEEEEEE
T ss_conf 048999858999999999999999987676689999999999887774132000356512677531651-7982579996
Q ss_pred ECCEEEEEEEECCC---E-EEEEEEEEECCCC----------------------CCCCCEEEEEE-----CCEEEEEECC
Q ss_conf 15537999861487---2-7875566412255----------------------66760178870-----8389998189
Q T0535 232 LNDVLLYTYPQKDG---K-YRLKNTLAVSRPV----------------------EKVPYALKIET-----SESCLLSASS 280 (294)
Q Consensus 232 f~D~li~~k~~~~~---~-~~~~~~i~l~~~~----------------------~~~~~~f~i~~-----~~~~~l~a~s 280 (294)
|+|+||+|+++..+ . +.++..+|+.... ...+++|.+.. ..+++|+|.|
T Consensus 251 F~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~a~s 330 (346)
T 2z0q_A 251 FQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQTHSLQAND 330 (346)
T ss_dssp ESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEEEEEECSS
T ss_pred CCCEEEEEEEECCCCCCEEEEEECCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECC
T ss_conf 38769999970478762158874221456448998777754335310121236766570489999739997799999699
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 89999999999719
Q T0535 281 CAERDEWYGCLSRA 294 (294)
Q Consensus 281 ~~ek~~W~~~i~~A 294 (294)
.+||+.|+++|++|
T Consensus 331 ~~ek~~W~~~i~~a 344 (346)
T 2z0q_A 331 TFNKQQWLNCIRQA 344 (346)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999996
No 7
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=0 Score=301.21 Aligned_cols=288 Identities=19% Similarity=0.229 Sum_probs=231.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 0689999999999999997689999-999998731024566789889988712888999998999999998862478750
Q T0535 2 SRALVIAQELLSSEKAYVELQHLNL-DFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWESQQ 80 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~~-~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~~~ 80 (294)
.||..||+||++||++||++|.++. .|+.|+... ++++++++..||+|+++|+.+|+.|+..|++..+.|....
T Consensus 20 ~kRq~vi~Eli~tE~~yv~~L~~l~~~f~~~l~~~-----~~l~~~~~~~lF~ni~~l~~~h~~~l~~L~~~~~~~~~~~ 94 (368)
T 1xcg_A 20 IDRQEVINELFVTEASHLRTLRVLDLIFYQRMKKE-----NLMPREELARLFPNLPELIEIHNSWCEAMKKLREEGPIIK 94 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHT-----TSSCHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHTCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999999999998756-----8999999999961899999999999999999985688765
Q ss_pred HHHHHHHHHHH------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCHHHHHHHHHHHHHHHH
Q ss_conf 18999999875------557-889986007899999999850099999999986------27802567788876447789
Q T0535 81 KVADVFLAREQ------GFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREFE------QSTAKHRLLRVVQRLFQYQV 147 (294)
Q Consensus 81 ~i~~~f~~~~~------~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~~------~~~l~~~L~~PiQRl~kY~l 147 (294)
.+|++|+.+.. ++. |..||.++..+...+.+..+.++.|..+++.++ ++++.++|++|+||++||++
T Consensus 95 ~ig~~f~~~~~~~~~~~~~~~Y~~Y~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~s~L~~P~QRi~rY~l 174 (368)
T 1xcg_A 95 EISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPL 174 (368)
T ss_dssp CCHHHHHHHHSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHHHTSGGGTTCCHHHHTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 38999998511666899999999999849989999999840468899999997504001578889999999988877208
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCC-------------CHHCCCCCCCC
Q ss_conf 999986427898836799999999999999999888876-6789999998620442-------------10002144543
Q T0535 148 LLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSEQG-ENLQKLVHIEHSVRGQ-------------GDLLQPGREFL 213 (294)
Q Consensus 148 Ll~~llk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~-~~~~~~~~~~~~~~~~-------------~~l~~~~r~~i 213 (294)
||++++++||++|||+..+..|++.++.++..+|+..+. ++..++.++....... ......++.++
T Consensus 175 lL~~llk~t~~~~~d~~~l~~a~~~~~~v~~~vn~~~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 254 (368)
T 1xcg_A 175 LLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSLDLTTRKMI 254 (368)
T ss_dssp HHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHSCSCTTTGGGGGCCGGGSCEE
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHCCCCCCCEEEE
T ss_conf 99999853699955888899899999999999999999999999999999711434300102220022214344650699
Q ss_pred CCCCCCCC---CCCCCEEEEEECCEEEEEEEECCCE----------------EEEEEEEEEC----CCCCCCCCEEEEEE
Q ss_conf 34643123---4542002565155379998614872----------------7875566412----25566760178870
Q T0535 214 KEGTLKVT---GKNRRPRHLFLNDVLLYTYPQKDGK----------------YRLKNTLAVS----RPVEKVPYALKIET 270 (294)
Q Consensus 214 ~~g~~~~~---~~~~~~~~fLf~D~li~~k~~~~~~----------------~~~~~~i~l~----~~~~~~~~~f~i~~ 270 (294)
++|.+... ++...+++|||+|+|++|+++..+. +..+..+.+. .+..+.+++|.+..
T Consensus 255 ~~g~l~~~~~~~~~~~~~~fLf~d~ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~l~~ 334 (368)
T 1xcg_A 255 HEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKRAFFIIC 334 (368)
T ss_dssp EEEEEEECCSSSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSCSSEEEEEE
T ss_pred EECCEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCEECCCEEEECCCCCCCEEEEEE
T ss_conf 95662454137983479999818869999860576652124555544455310005705612135755789998389998
Q ss_pred ------CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf ------838999818989999999999719
Q T0535 271 ------SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 271 ------~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
.++++|+|.|.+||+.|+++|.+|
T Consensus 335 ~~~~~~~~~~~l~a~s~~ek~~W~~~i~~a 364 (368)
T 1xcg_A 335 TSKLGPPQIYELVALTSSDKNTWMELLEEA 364 (368)
T ss_dssp CCSSSTTCEEEEECSSHHHHHHHHHHHHHH
T ss_pred ECCCCCCEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 527999769999959999999999999999
No 8
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=100.00 E-value=0 Score=298.77 Aligned_cols=287 Identities=20% Similarity=0.212 Sum_probs=231.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC--
Q ss_conf 0689999999999999997689999-9999987310245667898899887128889999989999999988624787--
Q T0535 2 SRALVIAQELLSSEKAYVELQHLNL-DFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWES-- 78 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~~-~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~-- 78 (294)
.||-.||.||++||++||++|.++. .|+.|+... ++++++++..||+|+++|+++|+.|+..|+.+...++.
T Consensus 23 ~kR~~vi~ELi~tE~~Yv~~L~~l~~~y~~~l~~~-----~~l~~~~~~~lF~ni~~l~~~h~~~l~~L~~~~~~~~~~~ 97 (385)
T 1txd_A 23 IKRQEVINELFYTERAHVRTLKVLDQVFYQRVSRE-----GILSPSELRKIFSNLEDILQLHIGLNEQMKAVRKRNETSV 97 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHH-----TCSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999999999988756-----9999999999971799999999999999999985557885
Q ss_pred CCHHHHHHHHHHH------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCHHHHHHHHHHHHHH
Q ss_conf 5018999999875------55-78899860078999999998500999999999862------78025677888764477
Q T0535 79 QQKVADVFLAREQ------GF-DHHAHILQFDRYLGLLSENCLHSPRLAAAVREFEQ------STAKHRLLRVVQRLFQY 145 (294)
Q Consensus 79 ~~~i~~~f~~~~~------~~-~y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~~~------~~l~~~L~~PiQRl~kY 145 (294)
...+|++|..++. ++ .|..||.+++.+...+.++.+.++.|..|++.++. +++.+||++|+||++||
T Consensus 98 ~~~i~~~~~~~~~~~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~f~~~~~~~~~~~~l~l~~~L~~PvqRi~rY 177 (385)
T 1txd_A 98 IDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKY 177 (385)
T ss_dssp CCCCHHHHHHHHSTHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHHHSGGGTTCCHHHHTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 22399999998655418999988999997178899999999821888889999985132006787899986588888778
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCC-------------HHCCCCCC
Q ss_conf 89999986427898836799999999999999999888876-67899999986204421-------------00021445
Q T0535 146 QVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSEQG-ENLQKLVHIEHSVRGQG-------------DLLQPGRE 211 (294)
Q Consensus 146 ~lLl~~llk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~-~~~~~~~~~~~~~~~~~-------------~l~~~~r~ 211 (294)
+|||++|+++|+ +|||+..++.|++.++.++..||+..+. ++..++.+++..+.+.+ .+..++|.
T Consensus 178 ~LLL~~llk~t~-~~~d~~~l~~a~~~i~~v~~~ine~~~~~e~~~~l~~i~~~i~~~~~~~~~~~~~~~~~~l~~~~R~ 256 (385)
T 1txd_A 178 PLLLDNIAKYTE-WPTEREKVKKAADHCRQILNFVNQAVKEAENKQRLEDYQRRLDTSSLKLSEYPNVEELRNLDLTKRK 256 (385)
T ss_dssp HHHHHHHHHTCC-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC-------CHHHHTCCGGGSC
T ss_pred HHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCE
T ss_conf 999987863599-9746889998799999999999999999999999999999840454320014531443144456651
Q ss_pred CCCCCCCCCCCC---CCCEEEEEECCEEEEEEEECCC----------------EEEEEEEEEECC-----CCCCCCCEEE
Q ss_conf 433464312345---4200256515537999861487----------------278755664122-----5566760178
Q T0535 212 FLKEGTLKVTGK---NRRPRHLFLNDVLLYTYPQKDG----------------KYRLKNTLAVSR-----PVEKVPYALK 267 (294)
Q Consensus 212 ~i~~g~~~~~~~---~~~~~~fLf~D~li~~k~~~~~----------------~~~~~~~i~l~~-----~~~~~~~~f~ 267 (294)
++++|.+...++ ...+++|||+|++++|+++... ++.++..+++.. ...+.+..|.
T Consensus 257 ll~~G~l~~~~~~~k~~~~~~fLF~d~ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~f~ 336 (385)
T 1txd_A 257 MIHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATDNKALFV 336 (385)
T ss_dssp EEEEEEEEEESSSSCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC-CCEEEE
T ss_pred EEEECCEEEECCCCCEEEEEEEECCCEEEEEEEECCCCCEECCCCCCCCCCCCCEEECCCEECCCEEEEECCCCCCCEEE
T ss_conf 89953637761689735799995079799999846755210232112466666310058166232367745889885799
Q ss_pred EEEC----CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 8708----38999818989999999999719
Q T0535 268 IETS----ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 268 i~~~----~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+... ..|+|+|.|.+||+.|+++|++|
T Consensus 337 i~~~~~~~~~~~l~a~s~~ek~~W~~~I~~~ 367 (385)
T 1txd_A 337 ISMSDNGAQIYELVAQTVSEKTVWQDLICRM 367 (385)
T ss_dssp EEECSSCEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 9994699718999979999999999999999
No 9
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=100.00 E-value=0 Score=298.74 Aligned_cols=287 Identities=17% Similarity=0.231 Sum_probs=228.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC---
Q ss_conf 06899999999999999976899999-99998731024566789889988712888999998999999998862478---
Q T0535 2 SRALVIAQELLSSEKAYVELQHLNLD-FHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWE--- 77 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~~~-~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~--- 77 (294)
|+++.||+||++||++||++|.++.+ |+.|+... .+++++++++.||+|+++|+++|+.|+..|+.+...|+
T Consensus 2 ~~~~~ii~Eli~tE~~Yv~~L~~l~~~y~~pL~~~----~~~l~~~~~~~lF~ni~~i~~~h~~fl~~L~~~~~~~~~~~ 77 (354)
T 1dbh_A 2 QTYYDLVKAFMAEIRQYIRELNLIIKVFREPFVSN----SKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGS 77 (354)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHC----TTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCCTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 30999999999999999999999999999999767----79999999999974999999999999999999983625687
Q ss_pred CCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH---HHHHHHH-----HHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 7501899999987555---7889986007899999999850---0999999-----999862780256778887644778
Q T0535 78 SQQKVADVFLAREQGF---DHHAHILQFDRYLGLLSENCLH---SPRLAAA-----VREFEQSTAKHRLLRVVQRLFQYQ 146 (294)
Q Consensus 78 ~~~~i~~~f~~~~~~~---~y~~y~~~~~~~~~~l~~~~~~---~~~f~~~-----~~~~~~~~l~~~L~~PiQRl~kY~ 146 (294)
....+|++|..+.+.+ .|..||.|++.+...+..+.+. ...+... ...+.++++.++|++|+||++||+
T Consensus 78 ~~~~i~~~f~~~~~~~~~~~Y~~Y~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~L~~PvQRl~rY~ 157 (354)
T 1dbh_A 78 PHPLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYF 157 (354)
T ss_dssp SSCCCHHHHHHHHHTTTTHHHHHHHHHHTSTTHHHHHHHHHHSTTHHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 53559999997616631518999996699999999999985664889999999872632346786899867999998899
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH----------------------HHHHHCC--
Q ss_conf 999998642789883679999999999999999988887667-899999----------------------9862044--
Q T0535 147 VLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSEQGEN-LQKLVH----------------------IEHSVRG-- 201 (294)
Q Consensus 147 lLl~~llk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~~~-~~~~~~----------------------~~~~~~~-- 201 (294)
|||++|+++|| +|||+..+++|++.++.+...+|+..+..+ ..++.+ ++..+.+
T Consensus 158 LLL~~L~k~t~-~~~d~~~l~~al~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (354)
T 1dbh_A 158 ELLKQLEEKSE-DQEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDGWE 236 (354)
T ss_dssp HHHHHHHHHCS-CHHHHHHHHHHHHHTHHHHHHHHHHHHSHHHHHHHHHTC-------------CTHHHHHHHTTEESCC
T ss_pred HHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999971369-97469999999999999999999999989999999999987763123321113999999998622567
Q ss_pred CCHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEC---------CCEEEEEEEEEECCC-------CCCCCCE
Q ss_conf 210002144543346431234542002565155379998614---------872787556641225-------5667601
Q T0535 202 QGDLLQPGREFLKEGTLKVTGKNRRPRHLFLNDVLLYTYPQK---------DGKYRLKNTLAVSRP-------VEKVPYA 265 (294)
Q Consensus 202 ~~~l~~~~r~~i~~g~~~~~~~~~~~~~fLf~D~li~~k~~~---------~~~~~~~~~i~l~~~-------~~~~~~~ 265 (294)
...+..++|.+++.|.+....++..+++|||+|++++|+++. ...|.++..+++... ..+.+++
T Consensus 237 ~~~l~~~~~~l~~~g~l~~~~~~~~~~~fLF~d~lv~~k~~~~~~~~~~~~~~~~~~k~~~~l~~~~v~~~~~~~~~~~~ 316 (354)
T 1dbh_A 237 GKDIGQCCNEFIMEGTLTRVGAKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHA 316 (354)
T ss_dssp SSCGGGTCCCEEEEEEEEETTCSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSSSCCSE
T ss_pred CCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCCEE
T ss_conf 76335678658995023330256536999618779999614444444567887279986888445088988998767627
Q ss_pred EEEEEC--CEEEEEECCHHHHHHHHHHHHH
Q ss_conf 788708--3899981898999999999971
Q T0535 266 LKIETS--ESCLLSASSCAERDEWYGCLSR 293 (294)
Q Consensus 266 f~i~~~--~~~~l~a~s~~ek~~W~~~i~~ 293 (294)
|.|... .+++|+|.|.+||+.|+++|.+
T Consensus 317 f~i~~~~~~~~~l~a~s~~ek~~W~~~L~~ 346 (354)
T 1dbh_A 317 FEIILKDENSVIFSAKSAEEKNNWMAALIS 346 (354)
T ss_dssp EEECCTTSCCEEEECSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 999957998899993999999999999999
No 10
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=8.4e-45 Score=290.38 Aligned_cols=287 Identities=16% Similarity=0.223 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 06899999999999999976899999-99998731024566789889988712888999998999999998862478750
Q T0535 2 SRALVIAQELLSSEKAYVELQHLNLD-FHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWESQQ 80 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~~~-~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~~~ 80 (294)
.|+..||+||++||++||++|.++.+ |..|+.. .++++++++..||+|+++|+.+|+.|+..|+.+...|....
T Consensus 10 ~k~~~vi~ELi~TE~~Yv~~L~~l~~~y~~pl~~-----~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~~~ 84 (377)
T 1foe_A 10 DKLRKVICELLETERTYVKDLNCLMERYLKPLQK-----ETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDGVRLVPDLE 84 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHT-----SSSSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 9999999999999999999999999999999855-----79999999999966799999999999999999885553555
Q ss_pred -------------HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHCCCHHHHHHHHHH
Q ss_conf -------------18999999875557-88998600789999999985009999999998-----627802567788876
Q T0535 81 -------------KVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREF-----EQSTAKHRLLRVVQR 141 (294)
Q Consensus 81 -------------~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~-----~~~~l~~~L~~PiQR 141 (294)
.+|++|..+.+.+. |..||.+|..+...+.++ ++++.|..+++.+ .++++.++|++|+||
T Consensus 85 ~~~~~~~~~~~~~~i~~~f~~~~~~~~~Y~~Y~~~~~~~~~~l~~~-~~~~~f~~fl~~~~~~~~~~~~l~~~L~~PiQR 163 (377)
T 1foe_A 85 KLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKA-KTDTAFKAFLDAQNPRQQHSSTLESYLIKPIQR 163 (377)
T ss_dssp GCCSGGGGHHHHHHHHHHHHHHTTGGGGHHHHHHHTTTHHHHHTTT-TTCHHHHHHHHHHCTTCCGGGSHHHHTTHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 5664254222366899999998999889999996438999999998-507689999999632125799888998589988
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHC---CCCHHCCCCCCCCCCC
Q ss_conf 44778999998642789883679999999999999999988887667-89999998-6204---4210002144543346
Q T0535 142 LFQYQVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSEQGEN-LQKLVHIE-HSVR---GQGDLLQPGREFLKEG 216 (294)
Q Consensus 142 l~kY~lLl~~llk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~~~-~~~~~~~~-~~~~---~~~~l~~~~r~~i~~g 216 (294)
++||++||++++|+||++|||+..++.|++.++.++..||+..+..+ ..++.+.. .... .......+++.+++.+
T Consensus 164 i~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~v~~~ine~~r~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 243 (377)
T 1foe_A 164 VLKYPLLLRELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAVFDQLIAEQTGEKKEVADLSMGDLLLHTS 243 (377)
T ss_dssp HTTHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSCSSCCCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
T ss_conf 85689999999961899985599999999999999999999999999999999999888606777756478886389887
Q ss_pred CCCC--------CCCCCCEEEEEECCEEEEEEEECC------------------CEEEEEEEEEECCC-------CC-CC
Q ss_conf 4312--------345420025651553799986148------------------72787556641225-------56-67
Q T0535 217 TLKV--------TGKNRRPRHLFLNDVLLYTYPQKD------------------GKYRLKNTLAVSRP-------VE-KV 262 (294)
Q Consensus 217 ~~~~--------~~~~~~~~~fLf~D~li~~k~~~~------------------~~~~~~~~i~l~~~-------~~-~~ 262 (294)
.+.. .++...+++|||+|++++|+++.. ..+.++..+++... .. ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~fLf~d~lll~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~ 323 (377)
T 1foe_A 244 VIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVRALPSADAEA 323 (377)
T ss_dssp EEESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEECCCCTTTTS
T ss_pred EEEEECCCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCC
T ss_conf 69993577645688861899999699399999747655331245553211246875278867770213577357865333
Q ss_pred CCEEEEE---------ECCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 6017887---------0838999818989999999999719
Q T0535 263 PYALKIE---------TSESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 263 ~~~f~i~---------~~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
...+.+. +...+.++|.|.++|..|+++|.+|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~s~~ek~~W~~~i~~~ 364 (377)
T 1foe_A 324 NAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSI 364 (377)
T ss_dssp CCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 55321353100136888628999889999999999999999
No 11
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), SH3 domain, endocytosis; 1.56A {Homo sapiens} PDB: 1ki1_B
Probab=100.00 E-value=0 Score=324.64 Aligned_cols=289 Identities=18% Similarity=0.198 Sum_probs=235.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC-
Q ss_conf 90689999999999999997689999-9999987310245667898899887128889999989999999988624787-
Q T0535 1 QSRALVIAQELLSSEKAYVELQHLNL-DFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWES- 78 (294)
Q Consensus 1 ~~~~~~ii~Eli~tE~~Yv~~l~l~~-~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~- 78 (294)
++||..||+||++||++||++|.++. .|+.|+... ++++.+++..||+|+++|+++|+.|++.|+.+...+..
T Consensus 25 e~kR~~vi~Eli~TE~~Yv~~L~~l~~~y~~~l~~~-----~~l~~~~~~~iF~ni~~i~~~h~~~l~~L~~~~~~~~~~ 99 (510)
T 3jzy_A 25 ERKRQGYIHELIQTEERYMADLQLVVEVFQKRMAES-----GFLTEGEMALIFVNWKELIMSNTKLLKALRVRKKTGGEK 99 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999999999999999999999999988567-----999988999986799999999999999999998556777
Q ss_pred --CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCHHHHHHHHHHHHHHHHHH
Q ss_conf --5018999999875557-889986007899999999850099999999986------2780256778887644778999
Q T0535 79 --QQKVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREFE------QSTAKHRLLRVVQRLFQYQVLL 149 (294)
Q Consensus 79 --~~~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~~------~~~l~~~L~~PiQRl~kY~lLl 149 (294)
...+|++|..+.+++. |..||.++..+...+.++.++++.|..+++.++ ++++.++|++|+||++||++||
T Consensus 100 ~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~~~~~l~~~~~~~~~f~~f~~~~~~~~~~~~~~l~~~L~~PvQRl~rY~lLL 179 (510)
T 3jzy_A 100 MPVQMIGDILAAELSHMQAYIRFCSCQLNGAALLQQKTDEDTDFKEFLKKLASDPRCKGMPLSSFLLKPMQRITRYPLLI 179 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 73639999999987778999999983688999999976117989999999851832368778999877777676789999
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCC----------CHHCCCCCCCCCCCCC
Q ss_conf 9986427898836799999999999999999888876-6789999998620442----------1000214454334643
Q T0535 150 TDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSEQG-ENLQKLVHIEHSVRGQ----------GDLLQPGREFLKEGTL 218 (294)
Q Consensus 150 ~~llk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~-~~~~~~~~~~~~~~~~----------~~l~~~~r~~i~~g~~ 218 (294)
++|+++||++|||+..+++|++.++.++..||+..+. ++..++.+++..+... .....++|.++++|.+
T Consensus 180 ~~Llk~t~~~~~d~~~l~~Al~~i~~v~~~ine~~~~~e~~~~l~~i~~~i~~~~~~~~~~~~~~~~~~~~r~li~eG~l 259 (510)
T 3jzy_A 180 RSILENTPESHADHSSLKLALERAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLAEQLIFNSLTNCLGPRKLLHSGKL 259 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEEECCE
T ss_conf 99997188877649999999999999999998999999999999999986044554200035761000367349997617
Q ss_pred CCCCCCCCEEEEEECCEEEEEEEECCCE-----------------EEEEEEEEECC-------CCCCCCCEEEEEE-CCE
Q ss_conf 1234542002565155379998614872-----------------78755664122-------5566760178870-838
Q T0535 219 KVTGKNRRPRHLFLNDVLLYTYPQKDGK-----------------YRLKNTLAVSR-------PVEKVPYALKIET-SES 273 (294)
Q Consensus 219 ~~~~~~~~~~~fLf~D~li~~k~~~~~~-----------------~~~~~~i~l~~-------~~~~~~~~f~i~~-~~~ 273 (294)
...++++.+++|||+|+||+|++++... ..++..+++.. +.....++|.+.+ .+.
T Consensus 260 ~~~~~~~~~~~fLF~D~Llitk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~f~i~~~~~~ 339 (510)
T 3jzy_A 260 YKTKSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPSSDEPVFHISHIDRV 339 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EECCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCEE
T ss_conf 87589956999970988999986503444566412100136774589735410134257865877666406999158706
Q ss_pred EEEEECCHHHHHHHHHHHHHC
Q ss_conf 999818989999999999719
Q T0535 274 CLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 274 ~~l~a~s~~ek~~W~~~i~~A 294 (294)
++|+|.|.+||+.|+++|++|
T Consensus 340 ~~l~a~s~~ek~~W~~~I~~a 360 (510)
T 3jzy_A 340 YTLRTDNINERTAWVQKIKAA 360 (510)
T ss_dssp ---------------------
T ss_pred EEEECCCHHHHHHHHHHHHHH
T ss_conf 999619999999999999999
No 12
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, signaling complex, protein-protein complex, rhogef; HET: GDP; 3.50A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=293.75 Aligned_cols=283 Identities=20% Similarity=0.274 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH-HHHHHHHHHCCCCC
Q ss_conf 0689999999999999997689999-999998731024566789889988712888999998999-99999886247875
Q T0535 2 SRALVIAQELLSSEKAYVELQHLNL-DFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGI-LEELEERLSNWESQ 79 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~~-~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~-l~~L~~~~~~~~~~ 79 (294)
+||++||+||++||++||++|.++. .|+.|+.... .+....+++..||+|+++|+.+|+.| +..++.+.. ..
T Consensus 11 ~kr~~vi~ELi~tE~~Yv~~L~~l~~~y~~~L~~~~---~~~~~~~~~~~iF~ni~~i~~~h~~~ll~~l~~~~~---~~ 84 (354)
T 2rgn_B 11 ERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQG---VPESLRGRDRIVFGNIQQIYEWHRDYFLQELQRCLK---DP 84 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHC---CCSSSGGGHHHHHTTHHHHHHHHHHTHHHHHHHHHS---CG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC---CH
T ss_conf 999999999999999999999999999999998569---987778899998558999999999999999998542---52
Q ss_pred CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 018999999875557-8899860078999999998500999999999862780256778887644778999998642789
Q T0535 80 QKVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREFEQSTAKHRLLRVVQRLFQYQVLLTDYLNNLCP 158 (294)
Q Consensus 80 ~~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~~~~~l~~~L~~PiQRl~kY~lLl~~llk~t~~ 158 (294)
..+|++|..+.++|. |..||.|++.+...+.+.......+.. ...+.+.++.++|++|+||++||++||++|+++||+
T Consensus 85 ~~ig~~f~~~~~~f~~Y~~Y~~n~~~~~~~l~~~~~~~~~~~~-~~~~~~~~l~~~L~~PiqRi~rY~llL~~llk~t~~ 163 (354)
T 2rgn_B 85 DWLAQLFIKHERRLHMYVVYCQNKPKSEHVVSEFGDSYFEELR-QQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYNR 163 (354)
T ss_dssp GGHHHHHHHTTTTTHHHHHHHHTSHHHHHHHTTTSHHHHHHHH-HHHCCSSCHHHHTTHHHHHHTSHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8889999999986103308986859999999999988999985-030368996898744888998726899999842899
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC--CCCCCEEEEEECCEE
Q ss_conf 883679999999999999999988887667899999986204421000214454334643123--454200256515537
Q T0535 159 DSAEYDNTQGALSLISKVTDRANDSEQGENLQKLVHIEHSVRGQGDLLQPGREFLKEGTLKVT--GKNRRPRHLFLNDVL 236 (294)
Q Consensus 159 ~~~d~~~l~~a~~~~~~~~~~in~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~i~~g~~~~~--~~~~~~~~fLf~D~l 236 (294)
+|+|++.+..|.+.+..++..+|+........ +....+...+.+..+++.++.+|..... +++..+++|||+|+|
T Consensus 164 ~~~d~~~l~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fLF~d~l 240 (354)
T 2rgn_B 164 AGMDTADLEQAVEVMCFVPKRCNDMMTLGRLR---GFEGKLTAQGKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQII 240 (354)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHHHHHHHGGGCB---SCCSCSTTSCCEEEEEEEEEECC-------CCCCEEEEEEESSEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCEE
T ss_conf 98145789999999999999999999887889---999887511543357726998244330024787414888606458
Q ss_pred EEEEEECCC-------EEEEEEEEEECC-----CCCCCCCEEEEEE------CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 999861487-------278755664122-----5566760178870------838999818989999999999719
Q T0535 237 LYTYPQKDG-------KYRLKNTLAVSR-----PVEKVPYALKIET------SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 237 i~~k~~~~~-------~~~~~~~i~l~~-----~~~~~~~~f~i~~------~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
++|+++.++ .|.++..++++. ..++.++.|.+.. .+.++|+|.|.++|..|+.+|++|
T Consensus 241 l~~k~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~~~~~f~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~ 316 (354)
T 2rgn_B 241 IFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQI 316 (354)
T ss_dssp EEEEECC--------CCEEEEEEEEGGGEEEEESGGGCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9986245654556776227875888410588876789985599998068999779999769999999999999999
No 13
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=100.00 E-value=1.3e-44 Score=289.25 Aligned_cols=285 Identities=20% Similarity=0.242 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCC-CCCCCCHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHCCCC
Q ss_conf 06899999999999999976899999-99998731024-56678988998871288899999899-99999988624787
Q T0535 2 SRALVIAQELLSSEKAYVELQHLNLD-FHGAVRALDDD-HEDTLAREELRQGLSELPAIHDLHQG-ILEELEERLSNWES 78 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~~~-~~~~l~~~~~~-~~~~l~~~~~~~lF~ni~~i~~~h~~-~l~~L~~~~~~~~~ 78 (294)
.+|..||+||++||++||++|.++.+ |+.|+...... ..+..+.+++..||+|+++|+.+|+. |++.|+.+...
T Consensus 10 ~~R~~vi~Eli~TE~~Yv~~L~~l~~~f~~~l~~~~~~~~~~~~~~~~~~~iF~ni~~i~~~h~~~~l~~l~~~~~~--- 86 (353)
T 1kz7_A 10 ILRRHVMNELLDTERAYVEELLCVLEGYAAEMDNPLMAHLISTGLQNKKNILFGNMEEIYHFHNRIFLRELESCIDC--- 86 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGCTTTTTTSCHHHHHTHHHHHTTHHHHHHHHHHTHHHHHHTTTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC---
T ss_conf 99999999999999999999999999999999865423688831077999986489999999999999999986546---
Q ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 5018999999875557-88998600789999999985009999999998-627802567788876447789999986427
Q T0535 79 QQKVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREF-EQSTAKHRLLRVVQRLFQYQVLLTDYLNNL 156 (294)
Q Consensus 79 ~~~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~-~~~~l~~~L~~PiQRl~kY~lLl~~llk~t 156 (294)
+..+|++|+++.+.|. |..||.||+.+.+.+.++. +++.|..+.+.. .+.++.++|++|+||++||+|||++|+++|
T Consensus 87 ~~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~-~~~~~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~Llk~t 165 (353)
T 1kz7_A 87 PELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCS-DCPFFQECQKKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKYS 165 (353)
T ss_dssp GGGHHHHHHTTTTGGGHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHTCSSCHHHHHTHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 188999999841689999999857388999999986-0868999986026688979998678867757899999998549
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCC------CCCCC--CCCCCCCEE
Q ss_conf 8988367999999999999999998888766789999998620442100021445433------46431--234542002
Q T0535 157 CPDSAEYDNTQGALSLISKVTDRANDSEQGENLQKLVHIEHSVRGQGDLLQPGREFLK------EGTLK--VTGKNRRPR 228 (294)
Q Consensus 157 ~~~~~d~~~l~~a~~~~~~~~~~in~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~i~------~g~~~--~~~~~~~~~ 228 (294)
| +|||+..++.|++.++.++..+|+..+..+... ....+...+.+...+...+. .+.+. ..+++..++
T Consensus 166 p-~~~d~~~l~~Al~~i~~~~~~vn~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T 1kz7_A 166 K-HCEGAEDLQEALSSILGILKAVNDSMHLIAITG---YDGNLGDLGKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRH 241 (353)
T ss_dssp T-TSTTHHHHHHHHHHHHHHHHHHHHHHHHTTEES---CCSCGGGGCCEEEEEEEEEEECCCCC-----CCCSSSCEEEE
T ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCCCCCCEEEECCCCCCCCEEHHHHCCCCCEEE
T ss_conf 9-984599999999999999999989999999984---475599870110278526722554442000012126874589
Q ss_pred EEEECCEEEEEEEECC--------CEEEEEEEEEECC-----CCCCCCCEEEEEE---CCEEEEEECCHHHHHHHHHHHH
Q ss_conf 5651553799986148--------7278755664122-----5566760178870---8389998189899999999997
Q T0535 229 HLFLNDVLLYTYPQKD--------GKYRLKNTLAVSR-----PVEKVPYALKIET---SESCLLSASSCAERDEWYGCLS 292 (294)
Q Consensus 229 ~fLf~D~li~~k~~~~--------~~~~~~~~i~l~~-----~~~~~~~~f~i~~---~~~~~l~a~s~~ek~~W~~~i~ 292 (294)
+|||+|++|+|+++.. +.|.++..+++.. +.++.++.|.|.. ...|+|+|+|.++|+.|+++|+
T Consensus 242 ~fLF~d~ll~~k~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~~~~~f~l~~~~~~~~~~l~a~s~~ek~~W~~~i~ 321 (353)
T 1kz7_A 242 LFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVKGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIR 321 (353)
T ss_dssp EEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBTTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHH
T ss_conf 99978868999752446654346875425667876853778678999764699988998399999599999999999999
Q ss_pred HC
Q ss_conf 19
Q T0535 293 RA 294 (294)
Q Consensus 293 ~A 294 (294)
+|
T Consensus 322 ~~ 323 (353)
T 1kz7_A 322 KV 323 (353)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 14
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releasing factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B
Probab=100.00 E-value=1.6e-41 Score=270.28 Aligned_cols=279 Identities=22% Similarity=0.283 Sum_probs=202.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHCCCCC
Q ss_conf 068999999999999999768999-999999873102456678988998871288899999899-999999886247875
Q T0535 2 SRALVIAQELLSSEKAYVELQHLN-LDFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQG-ILEELEERLSNWESQ 79 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~-~~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~-~l~~L~~~~~~~~~~ 79 (294)
.||.+||+||++||++||++|.++ ..|+.|+........+.+.. +...||+|+++|+.+|+. |+..++.. +...
T Consensus 8 ~kR~~vi~El~~tE~~Yv~~L~~l~~~y~~~l~~~~~~~~~~~~~-~~~~lF~ni~~i~~~h~~~ll~~le~~---~~~~ 83 (311)
T 1nty_A 8 RRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVN-KELIIFGNMQEIYEFHNNIFLKELEKY---EQLP 83 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTTT-CHHHHHTTHHHHHHHHHHTHHHHHHHT---TTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH-HHHHHHCCHHHHHHHHHHHHHHHHHHH---HCCH
T ss_conf 999999999999999999999999999999998614248710000-598874279999999999889999975---4271
Q ss_pred CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 018999999875557-889986007899999999850099999999-986278025677888764477899999864278
Q T0535 80 QKVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVR-EFEQSTAKHRLLRVVQRLFQYQVLLTDYLNNLC 157 (294)
Q Consensus 80 ~~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~-~~~~~~l~~~L~~PiQRl~kY~lLl~~llk~t~ 157 (294)
.++|++|..+.+.|. |..||.+++.+...+.+..+ ..+..+.. ...+.++.++|++|+||++||++||++++++||
T Consensus 84 ~~ig~~f~~~~~~f~~Y~~Y~~~~~~a~~~l~~~~~--~~~~~~~~~~~~~~~L~~~L~~P~qRl~rY~lLL~~llk~t~ 161 (311)
T 1nty_A 84 EDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHAG--SYFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCE 161 (311)
T ss_dssp GGTHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHTT--THHHHHHHHHTCSSCHHHHHTHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH--HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 899999997333545699988476999999999899--999999962056767889984689999989999999872598
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHC-CCCCCCCCCCCCCCCCCCCCEEEEEECCEE
Q ss_conf 9883679999999999999999988887667899999986204421000-214454334643123454200256515537
Q T0535 158 PDSAEYDNTQGALSLISKVTDRANDSEQGENLQKLVHIEHSVRGQGDLL-QPGREFLKEGTLKVTGKNRRPRHLFLNDVL 236 (294)
Q Consensus 158 ~~~~d~~~l~~a~~~~~~~~~~in~~~~~~~~~~~~~~~~~~~~~~~l~-~~~r~~i~~g~~~~~~~~~~~~~fLf~D~l 236 (294)
++||| ++.|++.+..+...+|+..+..+.... .......+.++ ..++.+...|. ..+++..+++|||+|+|
T Consensus 162 ~~~~d---l~~a~~~~~~v~~~vn~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~fLF~d~l 233 (311)
T 1nty_A 162 EGKGE---IKDGLEVMLSVPKRANDAMHLSMLEGF---DENIESQGELILQESFQVWDPKT--LIRKGRERHLFLFEMSL 233 (311)
T ss_dssp TTCTT---HHHHHHHHHHHHHHHHHHHHHTTEESC---CSCSGGGCCEEEEEEEEEECSSS--SSCCEEEEEEEEESSEE
T ss_pred CCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHCCEEEECCEEEECCCC--CCCCCCEEEEEEECCEE
T ss_conf 75699---999999999999999999988866401---34555313125655637862642--22432134677464737
Q ss_pred EEEEEECCC----EEEEEEEEEECC-----CCCCCCCEEEEE------ECCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 999861487----278755664122-----556676017887------0838999818989999999999719
Q T0535 237 LYTYPQKDG----KYRLKNTLAVSR-----PVEKVPYALKIE------TSESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 237 i~~k~~~~~----~~~~~~~i~l~~-----~~~~~~~~f~i~------~~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
|+|++.+.+ .|.++..+++.+ ..++.+..|.+. ...+++|+|+|.+||+.|+++|++|
T Consensus 234 l~~k~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~ 306 (311)
T 1nty_A 234 VFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREV 306 (311)
T ss_dssp EEEEEEECTTCCEEEEEEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9998635567885179966877565388985789973289998327999859999839999999999999999
No 15
>3gf9_A Intersectin 2; structural genomics consortium, guanine nucleotide exchange factor, SGC, SH3 domain, endocytosis; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=233.97 Aligned_cols=183 Identities=15% Similarity=0.145 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC--
Q ss_conf 068999999999999999768999-99999987310245667898899887128889999989999999988624787--
Q T0535 2 SRALVIAQELLSSEKAYVELQHLN-LDFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWES-- 78 (294)
Q Consensus 2 ~~~~~ii~Eli~tE~~Yv~~l~l~-~~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~-- 78 (294)
++|..|++||++||++||++|.++ ..|+.|+... ++++++++..||+|+++|+.+|+.|+..|+.+...+..
T Consensus 97 ~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~pl~~~-----~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~~~ 171 (295)
T 3gf9_A 97 RKRQGYIHELIQTEERYMADLQLVVEVFQKRMAES-----GFLTEGEMALIFVNWKELIMSNTKLLKALRVRKKTGGEKM 171 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHH-----SSSCHHHHHHHHTTHHHHHHHHHHHHHHHHTTC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999989999999999999999999866-----8999899999828999999999999999999985566556
Q ss_pred -CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf -5018999999875557-889986007899999999850099999999986------27802567788876447789999
Q T0535 79 -QQKVADVFLAREQGFD-HHAHILQFDRYLGLLSENCLHSPRLAAAVREFE------QSTAKHRLLRVVQRLFQYQVLLT 150 (294)
Q Consensus 79 -~~~i~~~f~~~~~~~~-y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~~------~~~l~~~L~~PiQRl~kY~lLl~ 150 (294)
...||++|+.+.+++. |..||.+++.+...+.+..++++.|..+++.+. +++|.++|++|+||++||++||+
T Consensus 172 ~~~~Ig~~f~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~L~~~L~~PvQRi~rY~llL~ 251 (295)
T 3gf9_A 172 PVQMIGDILAAELSHMQAYIRFCSCQLNGAALLQQKTDEDTDFKEFLKKLASDPRCKGMPLSSFLLKPMQRITRYPLLIR 251 (295)
T ss_dssp -CCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTSTTTTTCCHHHHTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 33089999999988757899998714889999999870179999999999809223686879998089989989999999
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 986427898836799999999999999999888876678
Q T0535 151 DYLNNLCPDSAEYDNTQGALSLISKVTDRANDSEQGENL 189 (294)
Q Consensus 151 ~llk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~~~~ 189 (294)
+|+|+||++|||+..++.|++.++.++..||+.++..+.
T Consensus 252 ~llk~T~~~h~d~~~l~~al~~~~~i~~~iNe~~r~~En 290 (295)
T 3gf9_A 252 SILENTPESHADHSSLKLALERAEELCSQVNEGVREKEN 290 (295)
T ss_dssp HHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999858999843999999999999999999999999998
No 16
>1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1
Probab=100.00 E-value=1.1e-34 Score=228.67 Aligned_cols=180 Identities=16% Similarity=0.207 Sum_probs=156.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9068999999999999999768999-999999873102456678988998871288899999899999999886247875
Q T0535 1 QSRALVIAQELLSSEKAYVELQHLN-LDFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWESQ 79 (294)
Q Consensus 1 ~~~~~~ii~Eli~tE~~Yv~~l~l~-~~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~~~~~~~~~ 79 (294)
++++-.||+||++||++||++|..+ ..|+.|+... +.++++++..||+|+++|+.+|+.|+..|+.+...|...
T Consensus 11 ~~~~~~ii~ELi~TE~~Yv~~L~~l~~~y~~pl~~~-----~~l~~~~~~~lF~ni~~i~~~h~~fl~~L~~~~~~~~~~ 85 (209)
T 1by1_A 11 KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTS-----EKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQ 85 (209)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----SSSSSSGGGTTHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 899999999999999999999999999999998647-----899999999998359999998999999999988589507
Q ss_pred CHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 018999999875557--88998600789999999985009999999998-----62780256778887644778999998
Q T0535 80 QKVADVFLAREQGFD--HHAHILQFDRYLGLLSENCLHSPRLAAAVREF-----EQSTAKHRLLRVVQRLFQYQVLLTDY 152 (294)
Q Consensus 80 ~~i~~~f~~~~~~~~--y~~y~~~~~~~~~~l~~~~~~~~~f~~~~~~~-----~~~~l~~~L~~PiQRl~kY~lLl~~l 152 (294)
.++|++|+.+.+.|. |..||.+++.+...+.+.. +.|..|++.+ .+.++.++|++|+||++||++||++|
T Consensus 86 ~~ig~~fl~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~---~~~~~f~~~~~~~~~~~~~L~~~Li~PvQRl~rY~lLL~~l 162 (209)
T 1by1_A 86 QRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHS---EELGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLKEL 162 (209)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TTHHHHTTTTCCCSSTTTHHHHHTTSTTTGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 589999999888885789999975899999999953---68999999763344667788998644888996799999999
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 642789883679999999999999999988887667
Q T0535 153 LNNLCPDSAEYDNTQGALSLISKVTDRANDSEQGEN 188 (294)
Q Consensus 153 lk~t~~~~~d~~~l~~a~~~~~~~~~~in~~~~~~~ 188 (294)
+++||++|+|+..|..|++.++.++..||+.++..+
T Consensus 163 lk~t~~~~~d~~~L~~a~~~~~~~~~~iNe~~r~~E 198 (209)
T 1by1_A 163 ERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKE 198 (209)
T ss_dssp HHSSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 974899980499999999999999999999999999
No 17
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=99.37 E-value=2.8e-12 Score=91.63 Aligned_cols=90 Identities=23% Similarity=0.357 Sum_probs=69.8
Q ss_pred HCCCCCCCCCCCCCCCC-C---CC-CCEEEEEECCEEEEEEEECC--CEEEEEEEEEECCC-------CCCCCCEEEEEE
Q ss_conf 00214454334643123-4---54-20025651553799986148--72787556641225-------566760178870
Q T0535 205 LLQPGREFLKEGTLKVT-G---KN-RRPRHLFLNDVLLYTYPQKD--GKYRLKNTLAVSRP-------VEKVPYALKIET 270 (294)
Q Consensus 205 l~~~~r~~i~~g~~~~~-~---~~-~~~~~fLf~D~li~~k~~~~--~~~~~~~~i~l~~~-------~~~~~~~f~i~~ 270 (294)
+..|||.++++|.+... . +. ..+++|||||+|++|++... ++|.++..+++... .+...++|.+.+
T Consensus 1 l~~pgR~Li~eG~l~~~~~~~~k~~~~~~~fLFnD~Ll~~k~~~~~~~~~~~~~~~~l~~~~v~~~~d~~~~~~~f~i~~ 80 (113)
T 1zc3_B 1 LETPGQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLM 80 (113)
T ss_dssp ----CCCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEEE
T ss_pred CCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEECCEEEEEEECCCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEEECC
T ss_conf 98999799994179998567798642699997458589999716667447521352243100122034445102479647
Q ss_pred -CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf -838999818989999999999719
Q T0535 271 -SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 271 -~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
.++++++|.|.+||..|+++|++|
T Consensus 81 ~~~~~~~~a~s~~ek~~Wi~~i~~a 105 (113)
T 1zc3_B 81 FPESRIFQAENAKIKREWLEVLEET 105 (113)
T ss_dssp TTEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 9808999979999999999999999
No 18
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.12 E-value=1.9e-10 Score=80.48 Aligned_cols=89 Identities=11% Similarity=0.217 Sum_probs=66.8
Q ss_pred CCCCCCCCCCCCCCCC----CCCCCEEEEEECCEEEEEEEEC-CCEEEEEEEEEECCC-------CCCCCCEEEEEE--C
Q ss_conf 0214454334643123----4542002565155379998614-872787556641225-------566760178870--8
Q T0535 206 LQPGREFLKEGTLKVT----GKNRRPRHLFLNDVLLYTYPQK-DGKYRLKNTLAVSRP-------VEKVPYALKIET--S 271 (294)
Q Consensus 206 ~~~~r~~i~~g~~~~~----~~~~~~~~fLf~D~li~~k~~~-~~~~~~~~~i~l~~~-------~~~~~~~f~i~~--~ 271 (294)
+...+.++++|.+.+. .+.+.+++|||+|+|++||+.. .+.|.++..+++... .+..+++|.|.+ .
T Consensus 22 l~~~G~li~~g~~~~~~~~~~k~k~R~lfLF~~~Ll~~K~~~~~~~~~~k~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~ 101 (132)
T 1v61_A 22 IKTLGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEGSDCMFEITGSTV 101 (132)
T ss_dssp STTTCCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCBCSTTCSSSSSCCCEEEECSSS
T ss_pred HHHCCCEEEEEEEEEEECCCCCCEEEEEEEECCEEEEEEECCCCCCEEEEEEECHHHCEECCCCCCCCCCCEEEEECCCC
T ss_conf 56568889998899996478871379999958989999973688835882110100010002335657664067751788
Q ss_pred CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 38999818989999999999719
Q T0535 272 ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 ~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+.++++|.|++||++|+++|+++
T Consensus 102 ~~~~l~a~s~eek~~W~~~L~~~ 124 (132)
T 1v61_A 102 ERIVVHCNNNQDFQEWMEQLNRL 124 (132)
T ss_dssp CEEEECCCCSHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHH
T ss_conf 57999929999999999999999
No 19
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=99.12 E-value=4.4e-11 Score=84.28 Aligned_cols=91 Identities=12% Similarity=0.197 Sum_probs=66.6
Q ss_pred CHHCCCCCCCCCCCCCCCC---CCCCCEEEEEECCEEEEEEEECC---CEEEEEEEEEECCC----CCCCCCEEEEEECC
Q ss_conf 1000214454334643123---45420025651553799986148---72787556641225----56676017887083
Q T0535 203 GDLLQPGREFLKEGTLKVT---GKNRRPRHLFLNDVLLYTYPQKD---GKYRLKNTLAVSRP----VEKVPYALKIETSE 272 (294)
Q Consensus 203 ~~l~~~~r~~i~~g~~~~~---~~~~~~~~fLf~D~li~~k~~~~---~~~~~~~~i~l~~~----~~~~~~~f~i~~~~ 272 (294)
+++...|+ ++.+|...+. ++.+.+++|||+|+||+|+++.. ..|.+++.|++.+. .+++++.|.+.+.+
T Consensus 2 g~i~~~G~-ll~~~~~~v~~~~~k~k~R~vFLF~~~Ll~~K~~~~~~~~~y~~K~~i~l~~~~v~d~~~d~~~F~l~~~~ 80 (119)
T 1fho_A 2 GDTGKLGR-IIRHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTDEDTIVLQPQE 80 (119)
T ss_dssp CSCCCCCC-SSEEEEEEECSTTCSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTTCCEEEEECCS
T ss_pred CCHHHCCC-EEEEEEEEEEECCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCEEEEEECC
T ss_conf 77465977-39972599994799861789999678799998516899965999479987967979779998489999689
Q ss_pred --------EEEEEECCHHHHHHHHHHHHHC
Q ss_conf --------8999818989999999999719
Q T0535 273 --------SCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 273 --------~~~l~a~s~~ek~~W~~~i~~A 294 (294)
.+.++|.|+++|+.|+++|.+|
T Consensus 81 ~~~~~~~i~~~l~a~s~~~K~~W~~~I~e~ 110 (119)
T 1fho_A 81 PGLPSFRIKPKDFETSEYVRKAWLRDIAEE 110 (119)
T ss_dssp TTCCCBCCCCCSSSSCSHHHHHHHHHHHTC
T ss_pred CCCCCEEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 997515898772059868999999999999
No 20
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transport; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=98.00 E-value=0.0006 Score=40.69 Aligned_cols=81 Identities=19% Similarity=0.250 Sum_probs=48.7
Q ss_pred CCCCCCCCCC------CCCCCEEEEEECCEEEEEEEECCCEEEEEEEEEEC------CCCCCCCCEEEEEEC---CEEEE
Q ss_conf 4334643123------45420025651553799986148727875566412------255667601788708---38999
Q T0535 212 FLKEGTLKVT------GKNRRPRHLFLNDVLLYTYPQKDGKYRLKNTLAVS------RPVEKVPYALKIETS---ESCLL 276 (294)
Q Consensus 212 ~i~~g~~~~~------~~~~~~~~fLf~D~li~~k~~~~~~~~~~~~i~l~------~~~~~~~~~f~i~~~---~~~~l 276 (294)
..++|.+... .+.+.+++|++.+-.++...+.+.. -...|.|. .+..+-++||.|.+. .+++|
T Consensus 278 ~~~~G~L~~~~~~~~~~~~w~rr~~~~~~~~l~~~~~~~~~--~~~~i~l~~~~v~~~~~~~r~~cF~i~~~~~~~~~~l 355 (385)
T 2q13_A 278 TRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGDVA--GGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSIL 355 (385)
T ss_dssp SCCEEEEEEC--------CCEEEEEEEETTEEEEECSSCSS--CEEEEECTTCEEEEECCTTCSSEEEEECTTSCBCCCE
T ss_pred CEEEEEEEEECCCCCCCCCCCEEEEEEECCEEEEECCCCCC--CCEEEECCEEEEEECCCCCCCCEEEEEECCCCCEEEE
T ss_conf 50431555125789987665127999989999996279878--8638987815998678888881389997499834999
Q ss_pred EECCHHHHHHHHHHHHHC
Q ss_conf 818989999999999719
Q T0535 277 SASSCAERDEWYGCLSRA 294 (294)
Q Consensus 277 ~a~s~~ek~~W~~~i~~A 294 (294)
+|.|.+|++.|+.+|+.|
T Consensus 356 qA~s~~~~~~Wi~~l~~~ 373 (385)
T 2q13_A 356 QAESKKDHEEWICTINNI 373 (385)
T ss_dssp ECSSHHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHH
T ss_conf 739999999999999999
No 21
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.65 E-value=0.00011 Score=45.28 Aligned_cols=71 Identities=15% Similarity=0.174 Sum_probs=47.4
Q ss_pred CCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECC-----CCCCCCCEEEEEE-CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 420025651-5537999861487278755664122-----5566760178870-838999818989999999999719
Q T0535 224 NRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSR-----PVEKVPYALKIET-SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 224 ~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~-----~~~~~~~~f~i~~-~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+.+.++|.+ ++.+.+...+..........|+|.. ..++.+++|.|.. .+.+.|.|.|.++++.|+++|++|
T Consensus 25 ~WkkRwfvL~~~~l~ly~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~f~i~~~~~~~~f~a~s~~~~~~W~~ai~~~ 102 (119)
T 2dhk_A 25 GWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMK 102 (119)
T ss_dssp CCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEECTTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEECCEEEEEECCCHHHCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 703789999799557998276111012342355550368613433313431579849999829999999999999999
No 22
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.58 E-value=0.00026 Score=42.89 Aligned_cols=81 Identities=22% Similarity=0.311 Sum_probs=49.9
Q ss_pred CCCCCCC-CCCCCCEEEEEECCEEEEEEEECCCEEEEEEEEEECC------CCCCCCCEEEEEEC--CEEEEEECCHHHH
Q ss_conf 3464312-3454200256515537999861487278755664122------55667601788708--3899981898999
Q T0535 214 KEGTLKV-TGKNRRPRHLFLNDVLLYTYPQKDGKYRLKNTLAVSR------PVEKVPYALKIETS--ESCLLSASSCAER 284 (294)
Q Consensus 214 ~~g~~~~-~~~~~~~~~fLf~D~li~~k~~~~~~~~~~~~i~l~~------~~~~~~~~f~i~~~--~~~~l~a~s~~ek 284 (294)
.+|-+.+ ..+..+.|+|.+.+-.+..-+.....-..+..|.|.. ...+.+++|.|.+. +.+.|+|.|.+|+
T Consensus 10 ~~gyL~k~~~~~WkkRwfvL~~~~L~yyk~~~~~~~p~~~I~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~l~A~s~~e~ 89 (107)
T 2cof_A 10 TSSYLNVLVNSQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEM 89 (107)
T ss_dssp TCCEEEEEETTEEEEEEEEECSSCEEEECSSTTCSEEEEEECTTTCEEECCCBTTBSCEEEEEETTEEEEEEECSSHHHH
T ss_pred EEEEEECCCCCCCCCEEEEEECCEEEEECCCCHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHH
T ss_conf 43553004799913189999799981755510001210301216864346633466506887626982479854999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999719
Q T0535 285 DEWYGCLSRA 294 (294)
Q Consensus 285 ~~W~~~i~~A 294 (294)
+.|+.+|.+|
T Consensus 90 ~~Wi~aL~~~ 99 (107)
T 2cof_A 90 GHWLGLLLSE 99 (107)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 23
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 2ys1_A
Probab=97.56 E-value=0.00046 Score=41.38 Aligned_cols=82 Identities=16% Similarity=0.235 Sum_probs=49.8
Q ss_pred CCCCCCCCCCCC-----CCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEEC--------CCCCCCCCEEEEEEC-----
Q ss_conf 543346431234-----5420025651-553799986148727875566412--------255667601788708-----
Q T0535 211 EFLKEGTLKVTG-----KNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVS--------RPVEKVPYALKIETS----- 271 (294)
Q Consensus 211 ~~i~~g~~~~~~-----~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~--------~~~~~~~~~f~i~~~----- 271 (294)
..+++|.+...+ +..+.++|.+ ++.|.+.+.... ..-++.+++. ......+++|.+.+.
T Consensus 11 ~V~k~GwL~k~~~~~~~~~WkkRwfVL~~~~L~yyk~~~~--~~~~~~i~l~~~~~~~~~~~~~~~~~~F~l~~~~~~~~ 88 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEE--KEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNV 88 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTC--SCEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCS
T ss_pred EEEEEEEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCC--CCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCCCCCC
T ss_conf 0899822499789876677346699998999989888665--56445401346300011245445544212028776313
Q ss_pred ----CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf ----38999818989999999999719
Q T0535 272 ----ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 ----~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+.+.|+|.|.+|++.|+.+|.+|
T Consensus 89 ~~~~r~~~l~a~s~~e~~~W~~al~~A 115 (125)
T 1dyn_A 89 YKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp STTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 467506999809999999999999986
No 24
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=97.51 E-value=0.00075 Score=40.10 Aligned_cols=96 Identities=18% Similarity=0.205 Sum_probs=60.8
Q ss_pred HHHHHHCCCCHHCCCCCCCCCCCCCCCC-CCCCCEEEEEEC-CEEEEEEEECCCEEEEEEEEEECCCC---CCCCCEEEE
Q ss_conf 9986204421000214454334643123-454200256515-53799986148727875566412255---667601788
Q T0535 194 HIEHSVRGQGDLLQPGREFLKEGTLKVT-GKNRRPRHLFLN-DVLLYTYPQKDGKYRLKNTLAVSRPV---EKVPYALKI 268 (294)
Q Consensus 194 ~~~~~~~~~~~l~~~~r~~i~~g~~~~~-~~~~~~~~fLf~-D~li~~k~~~~~~~~~~~~i~l~~~~---~~~~~~f~i 268 (294)
..+.....+.. ..+++..+++|.+... +...+.|+|++. +-+++.+...+ -..++.|+++... ...+++|.|
T Consensus 35 ~~q~~~~~~~~-~~~~~~IlK~G~L~Krgg~~wKkRwFvLt~~~llYY~d~~~--~~~KG~I~Ls~~~~ve~~~~~~F~I 111 (151)
T 1w1g_A 35 EKQAGGNPWHQ-FVENNLILKMGPVDKRKGLFARRRQLLLTEGPHLYYVDPVN--KVLKGEIPWSQELRPEAKNFKTFFV 111 (151)
T ss_dssp HHHHHHCTTGG-GTTTCCEEEEEEEEEEETTEEEEEEEEEETTTEEEEEETTT--TEEEEEECCCTTCEEEESSSSEEEE
T ss_pred HHHHCCCCCCC-CCCCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEECCC--CCCCCCEEEEECCCCCCCCCCEEEE
T ss_conf 87753685534-46787389999998146770106899995894899980664--5404733521011323578725999
Q ss_pred EEC-CEEEEEECCHHHHHHHHHHHHH
Q ss_conf 708-3899981898999999999971
Q T0535 269 ETS-ESCLLSASSCAERDEWYGCLSR 293 (294)
Q Consensus 269 ~~~-~~~~l~a~s~~ek~~W~~~i~~ 293 (294)
.+. .+|.|.+ +..++++|+++|++
T Consensus 112 ~tp~RtY~l~d-s~~e~~~Wv~aI~~ 136 (151)
T 1w1g_A 112 HTPNRTYYLMD-PSGNAHKWCRKIQE 136 (151)
T ss_dssp EETTEEEEEEC-TTSCHHHHHHHHHH
T ss_pred ECCCEEEEEEC-CHHHHHHHHHHHHH
T ss_conf 71884899977-84779999999999
No 25
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=97.48 E-value=0.00023 Score=43.17 Aligned_cols=85 Identities=22% Similarity=0.303 Sum_probs=49.1
Q ss_pred CCCCCCCCCCCCC---CCCCEEEE-EECCEEEEEEEECCCEEEEEEEEEECC------------CCCCCCCEEEEEEC--
Q ss_conf 4543346431234---54200256-515537999861487278755664122------------55667601788708--
Q T0535 210 REFLKEGTLKVTG---KNRRPRHL-FLNDVLLYTYPQKDGKYRLKNTLAVSR------------PVEKVPYALKIETS-- 271 (294)
Q Consensus 210 r~~i~~g~~~~~~---~~~~~~~f-Lf~D~li~~k~~~~~~~~~~~~i~l~~------------~~~~~~~~f~i~~~-- 271 (294)
+..+++|.+...+ ++.+.++| |.++.+.+..........-++.+++.. .....+++|.|.+.
T Consensus 5 ~~iikeG~L~K~~~~~k~Wk~r~~vL~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~ 84 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADE 84 (109)
T ss_dssp CCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTTC
T ss_pred CCEEEEEEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCC
T ss_conf 85999999998879999807899999878016999836665565665024673799951223445567772599995898
Q ss_pred CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 38999818989999999999719
Q T0535 272 ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 ~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
..+.|+|.|.+|+..|+++|+.|
T Consensus 85 ~~~~~~a~s~~e~~~Wi~ai~~a 107 (109)
T 2i5f_A 85 VHYFLQAATPKERTEWIKAIQMA 107 (109)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHHHHHHHHHH
T ss_conf 39999859999999999999997
No 26
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=97.47 E-value=0.00085 Score=39.76 Aligned_cols=33 Identities=15% Similarity=0.334 Sum_probs=27.8
Q ss_pred CCCEEEEEE-CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 760178870-838999818989999999999719
Q T0535 262 VPYALKIET-SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 262 ~~~~f~i~~-~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
.+++|.|.. ...++|+|.|.+|++.|+++|.+|
T Consensus 97 ~~~~F~i~~~~r~~~L~Aes~ee~~~WI~aL~~~ 130 (169)
T 1btk_A 97 FPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNV 130 (169)
T ss_dssp CCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 7721899959907999849999999999999999
No 27
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=97.43 E-value=0.00053 Score=41.01 Aligned_cols=85 Identities=18% Similarity=0.269 Sum_probs=51.7
Q ss_pred CCCCCCCCCCCCCCC----CCCCEEEEEEC-CEEEEEEEECCCEEEEEEEEEECC---------CCCCCCCEEEEEEC--
Q ss_conf 144543346431234----54200256515-537999861487278755664122---------55667601788708--
Q T0535 208 PGREFLKEGTLKVTG----KNRRPRHLFLN-DVLLYTYPQKDGKYRLKNTLAVSR---------PVEKVPYALKIETS-- 271 (294)
Q Consensus 208 ~~r~~i~~g~~~~~~----~~~~~~~fLf~-D~li~~k~~~~~~~~~~~~i~l~~---------~~~~~~~~f~i~~~-- 271 (294)
+....+++|.+...+ +..+.++|.+. +.|.+.+... . ...++.|++.. +...-+++|.|...
T Consensus 17 ~~~~~~k~G~L~K~~~~~~k~WkkR~fvL~~~~L~y~~~~~-~-~~~~~~i~l~~~~v~~~~~~~~~~~~~~F~i~~~~~ 94 (128)
T 2dkp_A 17 PNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEK-E-EGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNM 94 (128)
T ss_dssp TTSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT-C-CSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSS
T ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCEEEEECCCC-C-CCCCCEECCCCEEEEEECCCCCCCCCCEEEEECCCC
T ss_conf 89976789999993899999837899999899998870456-6-666505744310156622201346775588645998
Q ss_pred CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 38999818989999999999719
Q T0535 272 ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 ~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+.++|+|.|.+|+++|+.+|.+|
T Consensus 95 ~~~~l~a~s~~e~~~Wi~ai~~a 117 (128)
T 2dkp_A 95 RTYYFCTDTGKEMELWMKAMLDA 117 (128)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEEEEECCHHHHHHHHHHHHHH
T ss_conf 49999959999999999999999
No 28
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.41 E-value=0.00067 Score=40.40 Aligned_cols=87 Identities=21% Similarity=0.244 Sum_probs=52.9
Q ss_pred CCCCCCCCCCCCCCC---------CCCCCEEEEEECC------EEEEEEEECCCEEEEEEEEEEC------CCCCCCCCE
Q ss_conf 214454334643123---------4542002565155------3799986148727875566412------255667601
Q T0535 207 QPGREFLKEGTLKVT---------GKNRRPRHLFLND------VLLYTYPQKDGKYRLKNTLAVS------RPVEKVPYA 265 (294)
Q Consensus 207 ~~~r~~i~~g~~~~~---------~~~~~~~~fLf~D------~li~~k~~~~~~~~~~~~i~l~------~~~~~~~~~ 265 (294)
......+++|.+... .++.+.|+|.+.+ .|++.+..... -..+..+.+. .....-+++
T Consensus 13 ~~~~~v~k~G~L~K~~~~~~~~~~~k~WkkR~fvL~~~~~~~~~L~yy~~~~~~-~~~~g~i~l~~~~~~~~~~~~~~~~ 91 (150)
T 1wg7_A 13 SQKGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKIS-KEPKGSIFLDSCMGVVQNNKVRRFA 91 (150)
T ss_dssp BCSCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCS-SCCSEEECTTTCCEECCCCSSCTTE
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCC-CCCEEEEECCCCEEEECCCCCCCEE
T ss_conf 778988689888974677776645465338999997476776057899602456-5531553024531552376656446
Q ss_pred EEEEEC--CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 788708--38999818989999999999719
Q T0535 266 LKIETS--ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 266 f~i~~~--~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
|.|... ..|+|+|.|.+|++.|+++|++|
T Consensus 92 f~i~~~~~r~~~l~A~s~~e~~~Wv~ai~~a 122 (150)
T 1wg7_A 92 FELKMQDKSSYLLAADSEVEMEEWITILNKI 122 (150)
T ss_dssp EEEECSSSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 9997068808999939989999999999999
No 29
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.39 E-value=0.00028 Score=42.71 Aligned_cols=81 Identities=22% Similarity=0.203 Sum_probs=49.7
Q ss_pred CCCCCCCCCCC--CCCEEEEEECC---EEEEEEEECCCEEEEEEEEEECC---------CCCCCCCEEEEEE-CCEEEEE
Q ss_conf 33464312345--42002565155---37999861487278755664122---------5566760178870-8389998
Q T0535 213 LKEGTLKVTGK--NRRPRHLFLND---VLLYTYPQKDGKYRLKNTLAVSR---------PVEKVPYALKIET-SESCLLS 277 (294)
Q Consensus 213 i~~g~~~~~~~--~~~~~~fLf~D---~li~~k~~~~~~~~~~~~i~l~~---------~~~~~~~~f~i~~-~~~~~l~ 277 (294)
+..|.+.+..+ +.+.++|.+.+ .+++...... .......|+|.. +..+.+++|.|.+ ...+.|+
T Consensus 9 ~~~G~L~~~~~~k~W~krwfvL~~~~~~~l~~~~~~~-~~~~~~~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~~~~l~ 87 (112)
T 2coc_A 9 LLCGPLRLSESGETWSEVWAAIPMSDPQVLHLQGGSQ-DGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLS 87 (112)
T ss_dssp SSEEEEEEESSSSCEEEEEEECCTTCTTCEEEECCTT-CSSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEE
T ss_pred EEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCC-CCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 8888658347999842889999689845999715565-656533335664257502343444661689998399599997
Q ss_pred ECCHHHHHHHHHHHHHC
Q ss_conf 18989999999999719
Q T0535 278 ASSCAERDEWYGCLSRA 294 (294)
Q Consensus 278 a~s~~ek~~W~~~i~~A 294 (294)
|.|.+|++.|+++|++|
T Consensus 88 A~s~~e~~~Wv~aL~~a 104 (112)
T 2coc_A 88 ASSAELQQQWLETLSTA 104 (112)
T ss_dssp ESSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
T ss_conf 79999999999999999
No 30
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.38 E-value=0.00056 Score=40.86 Aligned_cols=86 Identities=21% Similarity=0.299 Sum_probs=51.9
Q ss_pred CCCCCCCCCCCCCCCC----CCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECC---------CCCCCCCEEEEEEC-
Q ss_conf 2144543346431234----5420025651-5537999861487278755664122---------55667601788708-
Q T0535 207 QPGREFLKEGTLKVTG----KNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSR---------PVEKVPYALKIETS- 271 (294)
Q Consensus 207 ~~~r~~i~~g~~~~~~----~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~---------~~~~~~~~f~i~~~- 271 (294)
.++...+++|.+...+ ++.+.++|.+ ++.|.+.+... . -.....+++.. .....+++|.+...
T Consensus 17 ~~~~~~~k~G~L~K~~~~~~~~Wkkr~~vL~~~~L~~y~~~~-~-~~~~~~i~l~~~~~~~~~~~~~~~~~~~f~i~~~~ 94 (122)
T 2yry_A 17 NPNAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK-E-ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAG 94 (122)
T ss_dssp CTTCCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT-C-CSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSS
T ss_pred CCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCEEEEEECCC-C-CCCCCEEECCCCEEEEEECCCCCCCCCEEEEECCC
T ss_conf 989981699999994899999837899999899998872356-5-56310588777489997030155775379998489
Q ss_pred -CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf -38999818989999999999719
Q T0535 272 -ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 -~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
..++|+|.|.++++.|+.+|.+|
T Consensus 95 ~~~~~~~a~s~~e~~~Wi~ai~~A 118 (122)
T 2yry_A 95 VRTYFFSAESPEEQEAWIQAMGEA 118 (122)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHH
T ss_pred CEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 849999939999999999999999
No 31
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.36 E-value=0.00089 Score=39.64 Aligned_cols=83 Identities=20% Similarity=0.270 Sum_probs=49.6
Q ss_pred CCCCCCCCCCCC----CCCCEEEEEECCEEEEEEEECCCEEEEEEEEEECC---------CCCCCCCEEEEEE--CCEEE
Q ss_conf 543346431234----54200256515537999861487278755664122---------5566760178870--83899
Q T0535 211 EFLKEGTLKVTG----KNRRPRHLFLNDVLLYTYPQKDGKYRLKNTLAVSR---------PVEKVPYALKIET--SESCL 275 (294)
Q Consensus 211 ~~i~~g~~~~~~----~~~~~~~fLf~D~li~~k~~~~~~~~~~~~i~l~~---------~~~~~~~~f~i~~--~~~~~ 275 (294)
..+++|.+...+ +..+.++|.+.|-.|+.-+...+ -.....+++.. .....+++|.|.. ...++
T Consensus 10 ~v~~~G~L~K~~~~~~~~Wkkr~fvL~~~~L~yy~~~~~-~~~~~~i~l~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 88 (117)
T 2d9y_A 10 PVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE-ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYF 88 (117)
T ss_dssp CCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTC-CSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEE
T ss_pred CEEEEEEEEEECCCCCCCCEEEEEEEECCEEEEECCCCC-CCCCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEE
T ss_conf 811899999958999998658899996999999506445-7621489814346899704224476538999738981999
Q ss_pred EEECCHHHHHHHHHHHHHC
Q ss_conf 9818989999999999719
Q T0535 276 LSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 276 l~a~s~~ek~~W~~~i~~A 294 (294)
|+|.|.++++.|+.+|++|
T Consensus 89 ~~a~s~~~~~~Wi~ai~~a 107 (117)
T 2d9y_A 89 FSAESPEEQEAWIQAMGEA 107 (117)
T ss_dssp EECSSHHHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHHHHHH
T ss_conf 9919999999999999998
No 32
>3feh_A Centaurin-alpha-1; structural genomics consortium, GAP, GTPase activation, SGC, cytoplasm, metal-binding, nucleus, phosphoprotein, polymorphism; 1.90A {Homo sapiens} PDB: 3fm8_C
Probab=97.30 E-value=0.00086 Score=39.74 Aligned_cols=83 Identities=23% Similarity=0.424 Sum_probs=50.8
Q ss_pred CCCCCCCCCCCCC----CCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEEC---------------CCCCCCCCEEEEE
Q ss_conf 4543346431234----5420025651-553799986148727875566412---------------2556676017887
Q T0535 210 REFLKEGTLKVTG----KNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVS---------------RPVEKVPYALKIE 269 (294)
Q Consensus 210 r~~i~~g~~~~~~----~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~---------------~~~~~~~~~f~i~ 269 (294)
+..+++|.+...+ ++.+.++|.+ .+.|.+.+...+. ..++.|++. ....+.+++|.|.
T Consensus 267 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~yyk~~~d~--~p~g~I~L~~~~~~~~~~~~~~~~~~~~~~~~~F~l~ 344 (386)
T 3feh_A 267 RNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDA--FARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIV 344 (386)
T ss_dssp CCCSEEEEEEECC------CEEEEEEEETTEEEEESSTTCS--BCCEEEECCCGGGTCEEEESCCSSCCSCCCSEEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCCEEEEEEEECCEEEEECCCCCC--CCCEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEE
T ss_conf 57764226999899989985268999979999998179987--6432798877504678303455555567897479998
Q ss_pred E-CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 0-838999818989999999999719
Q T0535 270 T-SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 270 ~-~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+ .+.+.|+|.|.+|+..|+.+|++|
T Consensus 345 t~~r~~~f~Aes~ee~~~Wi~aL~~A 370 (386)
T 3feh_A 345 TPDRKFLFACETESDQREWVAAFQKA 370 (386)
T ss_dssp CSSCEEEEEESSHHHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 09958999849999999999999999
No 33
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=97.27 E-value=0.0007 Score=40.29 Aligned_cols=86 Identities=16% Similarity=0.298 Sum_probs=50.5
Q ss_pred CCCCCCCCCCCCCCCC----CCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEEC---------CCCCCCCCEEEEEE--
Q ss_conf 2144543346431234----5420025651-553799986148727875566412---------25566760178870--
Q T0535 207 QPGREFLKEGTLKVTG----KNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVS---------RPVEKVPYALKIET-- 270 (294)
Q Consensus 207 ~~~r~~i~~g~~~~~~----~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~---------~~~~~~~~~f~i~~-- 270 (294)
.++...+++|.+...+ ++.+.++|.+ ++.|.+.+.....+ .+..+.+. ....+.+++|.+..
T Consensus 6 ~~~~~~~~eG~L~k~~~~~~k~W~kryfvL~~~~L~~~~~~~~~~--~~~~i~l~~~~v~~~~~~~~~~~~~~f~~~~~~ 83 (123)
T 1upq_A 6 DPNLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREES--VLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPG 83 (123)
T ss_dssp CTTSCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCCS--CCEEEEGGGCEEEECCSSCTTSSSSEEEEECTT
T ss_pred CCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCEEEEECCCCCCC--CCCEECCCCEEEEEECCCCCCCCCEEEEEECCC
T ss_conf 999970799999993899999806899999799998862555323--333051553389862267666762579974389
Q ss_pred CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 838999818989999999999719
Q T0535 271 SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 271 ~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
...+.|+|.|.+|++.|+.+|++|
T Consensus 84 ~~~~~l~a~s~~e~~~Wi~ai~~a 107 (123)
T 1upq_A 84 MRTYVLAADTLEDLRGWLRALGRA 107 (123)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 829999809999999999999999
No 34
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by vector-derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=97.26 E-value=0.0011 Score=39.17 Aligned_cols=83 Identities=20% Similarity=0.227 Sum_probs=49.1
Q ss_pred CCCCCCCCCCCCC-------CCCCEEEE-EECCEEEEEEEECCCEEEEEEEEEECC----------CCCCCCCEEEEEEC
Q ss_conf 4543346431234-------54200256-515537999861487278755664122----------55667601788708
Q T0535 210 REFLKEGTLKVTG-------KNRRPRHL-FLNDVLLYTYPQKDGKYRLKNTLAVSR----------PVEKVPYALKIETS 271 (294)
Q Consensus 210 r~~i~~g~~~~~~-------~~~~~~~f-Lf~D~li~~k~~~~~~~~~~~~i~l~~----------~~~~~~~~f~i~~~ 271 (294)
...+++|.+...+ ++.+.++| |.++.|.+.+...... .++.+.|.. .....+++|.|...
T Consensus 15 ~~~~k~G~L~k~~~~~~~~~k~WkkrwfvL~~~~L~yy~~~~~~~--~~~~i~L~~~~~~~~~~~~~~~~~~~~F~i~~~ 92 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQ--QKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAP 92 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSS--CSEEEECTTCEEEECTTSCSSTTGGGEEEEECT
T ss_pred CCEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCEEEECCCCCCC--CCCCCCCCCEEEEEEECCCCCCCCCCEEEEECC
T ss_conf 986589889988899997767846899999479687986665566--665410023589986202224665431389859
Q ss_pred --CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf --38999818989999999999719
Q T0535 272 --ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 --~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
..+.|+|.|.+|++.|+.+|+.|
T Consensus 93 ~~~~~~~~a~s~~e~~~W~~ai~~~ 117 (148)
T 1u5f_A 93 DKRIYQFTAASPKDAEEWVQQLKFI 117 (148)
T ss_dssp TSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9719999469999999999999999
No 35
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.25 E-value=0.00066 Score=40.42 Aligned_cols=68 Identities=10% Similarity=0.204 Sum_probs=43.3
Q ss_pred CCCEEEEEECC-EEEEEEEECCCEEEEEEEEEEC----CCCCCCCCEEEEEE-CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 42002565155-3799986148727875566412----25566760178870-838999818989999999999719
Q T0535 224 NRRPRHLFLND-VLLYTYPQKDGKYRLKNTLAVS----RPVEKVPYALKIET-SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 224 ~~~~~~fLf~D-~li~~k~~~~~~~~~~~~i~l~----~~~~~~~~~f~i~~-~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
..+.++|.+.+ .|.+.+ .....-. ..+.+. ....+.+++|.|.+ .+.++|+|.|.+|++.|+.+|++|
T Consensus 26 ~WkkR~fvL~~~~L~yy~-~~~~~~~--~~i~l~~~~~~~~~~~~~~F~i~~~~~~~~f~a~s~~e~~~Wi~ai~~a 99 (114)
T 2da0_A 26 VWQRRKCSVKNGILTISH-ATSNRQP--AKLNLLTCQVKPNAEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNS 99 (114)
T ss_dssp CEEEEEEEEETTEEEECC-SSCCSCC--EEEETTTSEEEECSSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCEEEEEE-CCCCCCC--CCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 945889999487746864-2455663--2000000234223443103450379935999979999999999999999
No 36
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=97.24 E-value=0.00065 Score=40.49 Aligned_cols=85 Identities=20% Similarity=0.241 Sum_probs=51.9
Q ss_pred CCCCCCCCCCCCCCC---CCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECCC----------CCCCCCEEEEEE-CC
Q ss_conf 144543346431234---5420025651-55379998614872787556641225----------566760178870-83
Q T0535 208 PGREFLKEGTLKVTG---KNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSRP----------VEKVPYALKIET-SE 272 (294)
Q Consensus 208 ~~r~~i~~g~~~~~~---~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~~----------~~~~~~~f~i~~-~~ 272 (294)
+....+++|.+...+ +....++|.+ .+.|.+.+...+ ....+.|++... .....++|.|.+ .+
T Consensus 10 ~~~~v~k~G~L~K~~~~~k~Wkkr~~vL~~~~L~yy~~~~~--~~~~~~i~l~~~~~v~~~~~~~~~~~~~~f~i~~~~~ 87 (125)
T 1eaz_A 10 QDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELE--KEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSR 87 (125)
T ss_dssp --CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTC--SSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSC
T ss_pred CCCCEEEEEEEEEECCCCCCEEEEEEEEECCEEEEEECCCC--CCCCEEEECCEEEEEEECCCCCCCCCCEEEEEECCCE
T ss_conf 99968899999996899998089999998999999953577--7761489611058998535444556752899851997
Q ss_pred EEEEEECCHHHHHHHHHHHHHC
Q ss_conf 8999818989999999999719
Q T0535 273 SCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 273 ~~~l~a~s~~ek~~W~~~i~~A 294 (294)
.++|+|.|.+++..|+.+|++|
T Consensus 88 ~~~~~a~s~~e~~~W~~~i~~a 109 (125)
T 1eaz_A 88 TFYVQADSPEEMHSWIKAVSGA 109 (125)
T ss_dssp EEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHH
T ss_conf 9999949999999999999999
No 37
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.22 E-value=0.0008 Score=39.93 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=53.0
Q ss_pred CCCCCCCCCCCCCC----CCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECCC---CCCCCCEEEEEE-CCEEEEEEC
Q ss_conf 44543346431234----5420025651-55379998614872787556641225---566760178870-838999818
Q T0535 209 GREFLKEGTLKVTG----KNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSRP---VEKVPYALKIET-SESCLLSAS 279 (294)
Q Consensus 209 ~r~~i~~g~~~~~~----~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~~---~~~~~~~f~i~~-~~~~~l~a~ 279 (294)
+...+++|.+...+ +..+.++|.+ ++.|.+.+... ....+..|+|.+. .....++|.|.+ ...+.|+|.
T Consensus 5 ~~~~vk~G~L~K~~~~~~k~Wk~R~fvL~~~~L~yy~~~~--~~~~~~~i~L~~~~~~~~~~~~~~~i~~~~~~~~~~a~ 82 (115)
T 2cod_A 5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEK--EMYSKGIIPLSAISTVRVQGDNKFEVVTTQRTFVFRVE 82 (115)
T ss_dssp CSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSC--CSSCCCEEETTTEEEEEEETTTEEEEEESSCCEEEECS
T ss_pred CCCCEEEEEEEEECCCCCCCEEEEEEEEECCEEEEECCCC--CCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEC
T ss_conf 9998899999998999999806799999799695031657--33312465543345652068742577469914999989
Q ss_pred CHHHHHHHHHHHHHC
Q ss_conf 989999999999719
Q T0535 280 SCAERDEWYGCLSRA 294 (294)
Q Consensus 280 s~~ek~~W~~~i~~A 294 (294)
|.+|...|+++|.+|
T Consensus 83 s~~e~~~W~~al~~a 97 (115)
T 2cod_A 83 KEEERNDWISILLNA 97 (115)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 38
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.21 E-value=0.0013 Score=38.63 Aligned_cols=82 Identities=11% Similarity=0.206 Sum_probs=49.4
Q ss_pred CCCCCCCCCCC---CCCCEEEEEECCEEEEEEEECCCEEEEEEEEEE-------CCCCCCCCCEEEEEEC--CEEEEEEC
Q ss_conf 43346431234---542002565155379998614872787556641-------2255667601788708--38999818
Q T0535 212 FLKEGTLKVTG---KNRRPRHLFLNDVLLYTYPQKDGKYRLKNTLAV-------SRPVEKVPYALKIETS--ESCLLSAS 279 (294)
Q Consensus 212 ~i~~g~~~~~~---~~~~~~~fLf~D~li~~k~~~~~~~~~~~~i~l-------~~~~~~~~~~f~i~~~--~~~~l~a~ 279 (294)
.+++|.+...+ ++.+.++|.+.+-.++..+.... ......+++ ..+..+.+++|.|... +.+.|+|.
T Consensus 8 ~~~~G~L~kk~~~~~~W~kr~~vL~~~~L~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~~~~~~f~i~~~~~~~~~f~a~ 86 (109)
T 1wgq_A 8 STMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASED-VAALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKAD 86 (109)
T ss_dssp CSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTC-SSCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECS
T ss_pred CCEEEEEEEECCCCCCCEEEEEEECCCEEEEECCCCC-CCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCEEEEEECC
T ss_conf 9589999998889998658999986998988737555-565411763015788530467762277898499879999869
Q ss_pred CHHHHHHHHHHHHHC
Q ss_conf 989999999999719
Q T0535 280 SCAERDEWYGCLSRA 294 (294)
Q Consensus 280 s~~ek~~W~~~i~~A 294 (294)
|.+++..|+.+|..|
T Consensus 87 s~~e~~~Wi~al~~a 101 (109)
T 1wgq_A 87 DAHSTQRWIDAFQEG 101 (109)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 39
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=97.18 E-value=0.00081 Score=39.90 Aligned_cols=83 Identities=23% Similarity=0.255 Sum_probs=50.3
Q ss_pred CCCCCCCCCCCC-------CCCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECCC----------CCCCCCEEEEEEC
Q ss_conf 454334643123-------45420025651-55379998614872787556641225----------5667601788708
Q T0535 210 REFLKEGTLKVT-------GKNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSRP----------VEKVPYALKIETS 271 (294)
Q Consensus 210 r~~i~~g~~~~~-------~~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~~----------~~~~~~~f~i~~~ 271 (294)
...+++|.+... .++.+.++|.+ .+.|.+.+...+. ..++.|+|... ...-+++|.|.+.
T Consensus 104 ~~~~k~GyL~K~~~~~~~~~k~Wkkr~fvL~~~~L~yyk~~~~~--~~~~~i~L~~~~~~~~~~~~~~~~k~~~F~i~~~ 181 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDK--QQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAP 181 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCS--SCSEEEECTTCEEEECGGGCSSTTGGGEEEEECS
T ss_pred CCEEEEEEEEEECCCCCCCCCCCEEEEEEEECCEEEEECCCCCC--CCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEC
T ss_conf 77118999998768999766761178999989999984366553--2457412467179853554434689867999917
Q ss_pred --CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf --38999818989999999999719
Q T0535 272 --ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 --~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+.|.|+|.|.++++.|+++|+.+
T Consensus 182 ~~r~~~f~A~s~~e~~~Wi~ai~~v 206 (211)
T 1u5e_A 182 DKRIYQFTAASPKDAEEWVQQLKFI 206 (211)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9808999759999999999999999
No 40
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.16 E-value=0.0013 Score=38.65 Aligned_cols=81 Identities=32% Similarity=0.420 Sum_probs=47.1
Q ss_pred CCCCCCCCCCC---CCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEE---------CCCCCCCCCEEEEEEC-------
Q ss_conf 43346431234---5420025651-55379998614872787556641---------2255667601788708-------
Q T0535 212 FLKEGTLKVTG---KNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAV---------SRPVEKVPYALKIETS------- 271 (294)
Q Consensus 212 ~i~~g~~~~~~---~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l---------~~~~~~~~~~f~i~~~------- 271 (294)
.+++|.+...+ ++.+.++|.+ ++.|.+.+...... .+..+++ .......+++|.+...
T Consensus 8 ~~k~G~L~k~~~~~k~WkrR~fvL~~~~L~y~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~ 85 (118)
T 1v89_A 8 PIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTK--PQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRM 85 (118)
T ss_dssp EEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSCCS--CSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCS
T ss_pred CEEEEEEEEECCCCCCCEEEEEEEECCEEEEEECCCCCC--CCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCEEC
T ss_conf 739999999889999836899999899999972435665--414898144679866224555676248996178750113
Q ss_pred --CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf --38999818989999999999719
Q T0535 272 --ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 --~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
..++|+|.|.+|++.|+.+|.+|
T Consensus 86 ~~~~~~l~a~s~ee~~~Wi~aL~~a 110 (118)
T 1v89_A 86 GQDSYVLMASSQAEMEEWVKFLRRV 110 (118)
T ss_dssp SCCCEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 8818999829999999999999999
No 41
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=97.15 E-value=0.0027 Score=36.67 Aligned_cols=72 Identities=13% Similarity=0.103 Sum_probs=45.6
Q ss_pred CCCCEEEEEE-CCEEEEEEEECCCEE-------EEEEEEEEC------CCCCCCCCEEEEEE---CCEEEEEECCHHHHH
Q ss_conf 5420025651-553799986148727-------875566412------25566760178870---838999818989999
Q T0535 223 KNRRPRHLFL-NDVLLYTYPQKDGKY-------RLKNTLAVS------RPVEKVPYALKIET---SESCLLSASSCAERD 285 (294)
Q Consensus 223 ~~~~~~~fLf-~D~li~~k~~~~~~~-------~~~~~i~l~------~~~~~~~~~f~i~~---~~~~~l~a~s~~ek~ 285 (294)
++.+.++|.+ .+.|.+.+....... .....++|. ......+++|.+.. ++.|.|+|.|.+|++
T Consensus 22 ~~WkkrwfvL~~~~L~yy~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~f~i~~~~~~~~~~f~A~s~~e~~ 101 (126)
T 2dtc_A 22 SSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAI 101 (126)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCCTTSTTEEEEECTTSCSEEEEECSSHHHHH
T ss_pred CCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEECCCHHHHH
T ss_conf 87518999997999989717521233432101332435971135677114310012177612566629999629979999
Q ss_pred HHHHHHHHC
Q ss_conf 999999719
Q T0535 286 EWYGCLSRA 294 (294)
Q Consensus 286 ~W~~~i~~A 294 (294)
.|+.+|..|
T Consensus 102 ~Wi~ai~~a 110 (126)
T 2dtc_A 102 LWHKHLDDA 110 (126)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 42
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.13 E-value=0.0019 Score=37.68 Aligned_cols=82 Identities=17% Similarity=0.292 Sum_probs=48.4
Q ss_pred CCCCCCCCCCCC---CCCCEEEE-EECCEEEEEEEECCCEEEEEEEEEECC--------CCCCCCCEEEEEE-CCEEEEE
Q ss_conf 543346431234---54200256-515537999861487278755664122--------5566760178870-8389998
Q T0535 211 EFLKEGTLKVTG---KNRRPRHL-FLNDVLLYTYPQKDGKYRLKNTLAVSR--------PVEKVPYALKIET-SESCLLS 277 (294)
Q Consensus 211 ~~i~~g~~~~~~---~~~~~~~f-Lf~D~li~~k~~~~~~~~~~~~i~l~~--------~~~~~~~~f~i~~-~~~~~l~ 277 (294)
..+++|.+...+ +....++| |.++.|.+.+.... ...+..|+|.. .....++.|.+.. ...+.|+
T Consensus 7 ~v~k~G~L~k~~~~~~~Wkkr~~vL~~~~L~yy~~~~~--~~~~~~i~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~f~ 84 (115)
T 2dn6_A 7 GVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDL--KDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEIS 84 (115)
T ss_dssp SCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTC--SSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEE
T ss_pred CCEEEEEEEEECCCCCCCEEEEEEEECCEEEEEECCCC--CCCCEEEECCCCEEECCCCCCCCCCEEEEECCCCEEEEEE
T ss_conf 97799999997789999689999998999999945777--7652599821154202134323674366862799899998
Q ss_pred ECCHHHHHHHHHHHHHC
Q ss_conf 18989999999999719
Q T0535 278 ASSCAERDEWYGCLSRA 294 (294)
Q Consensus 278 a~s~~ek~~W~~~i~~A 294 (294)
|.|.+|++.|+++|+.|
T Consensus 85 a~s~~e~~~W~~ai~~a 101 (115)
T 2dn6_A 85 ASDKKKKQEWIQAIHST 101 (115)
T ss_dssp CSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
T ss_conf 79999999999999999
No 43
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.13 E-value=0.0014 Score=38.51 Aligned_cols=81 Identities=22% Similarity=0.351 Sum_probs=48.5
Q ss_pred CCCCCCCCCC---CCCCCEEEE-EECCEEEEEEEECCCEEEEEEEEEEC------C--CCCCCCCEEEEEE--CCEEEEE
Q ss_conf 4334643123---454200256-51553799986148727875566412------2--5566760178870--8389998
Q T0535 212 FLKEGTLKVT---GKNRRPRHL-FLNDVLLYTYPQKDGKYRLKNTLAVS------R--PVEKVPYALKIET--SESCLLS 277 (294)
Q Consensus 212 ~i~~g~~~~~---~~~~~~~~f-Lf~D~li~~k~~~~~~~~~~~~i~l~------~--~~~~~~~~f~i~~--~~~~~l~ 277 (294)
.+++|.+... .++.+.++| |..+.|.+.+..... .....|++. . .....+++|.|.+ +..+.|+
T Consensus 5 ~~keG~L~K~~~~~~~WkkRwfvL~~~~L~~y~~~~~~--~~~~~i~L~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~l~ 82 (113)
T 1pls_A 5 RIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDN--SPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQ 82 (113)
T ss_dssp CSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCS--SCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEE
T ss_pred CEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCC--CCCEEEECCCCEEEEECCCCCCCEEEEEEECCCCEEEEEE
T ss_conf 66999999947999996678999918957988405777--7635880201069984466677336899993899799998
Q ss_pred ECCHHHHHHHHHHHHHC
Q ss_conf 18989999999999719
Q T0535 278 ASSCAERDEWYGCLSRA 294 (294)
Q Consensus 278 a~s~~ek~~W~~~i~~A 294 (294)
|.|.+|++.|+.+|++|
T Consensus 83 a~s~~e~~~Wi~aI~~a 99 (113)
T 1pls_A 83 AAFLEERDAWVRDINKA 99 (113)
T ss_dssp CSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
T ss_conf 69999999999999999
No 44
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=97.12 E-value=0.0015 Score=38.17 Aligned_cols=74 Identities=23% Similarity=0.323 Sum_probs=45.2
Q ss_pred CCCCCCCEEEEEECCEEEEEEEECCCEEEEEEEEEEC---------CCCCCCCCEEEEEE--CCEEEEEECCHHHHHHHH
Q ss_conf 2345420025651553799986148727875566412---------25566760178870--838999818989999999
Q T0535 220 VTGKNRRPRHLFLNDVLLYTYPQKDGKYRLKNTLAVS---------RPVEKVPYALKIET--SESCLLSASSCAERDEWY 288 (294)
Q Consensus 220 ~~~~~~~~~~fLf~D~li~~k~~~~~~~~~~~~i~l~---------~~~~~~~~~f~i~~--~~~~~l~a~s~~ek~~W~ 288 (294)
+.++..+.++|.+.+-.|+.-+...+. ..+..+++. ....+-+++|.+.. ...++|+|.|.++++.|+
T Consensus 15 ~~~~~Wk~r~~vL~~~~L~~y~~~~~~-~~~~~i~l~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~f~a~s~~e~~~Wi 93 (112)
T 3cxb_B 15 LGKEHWKTCFVVLSNGILYQYPDRTDV-IPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWM 93 (112)
T ss_dssp SSCCCCEEEEEEEETTEEEEESSSSCC-SCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHH
T ss_pred CCCCCCEEEEEEEECCEEEEEECCCCC-CCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHH
T ss_conf 877885089999987969899514443-0013114643489985111023554025531345459999919999999999
Q ss_pred HHHHHC
Q ss_conf 999719
Q T0535 289 GCLSRA 294 (294)
Q Consensus 289 ~~i~~A 294 (294)
.+|.+|
T Consensus 94 ~al~~a 99 (112)
T 3cxb_B 94 QHLCQA 99 (112)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 45
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=97.10 E-value=0.0017 Score=37.97 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=46.4
Q ss_pred CCCCCEEEEEECCEEEEEEEECCC-----EEEEEEEEEECC-------CCCCCCCEEEEEE--CCEEEEEECCHHHHHHH
Q ss_conf 454200256515537999861487-----278755664122-------5566760178870--83899981898999999
Q T0535 222 GKNRRPRHLFLNDVLLYTYPQKDG-----KYRLKNTLAVSR-------PVEKVPYALKIET--SESCLLSASSCAERDEW 287 (294)
Q Consensus 222 ~~~~~~~~fLf~D~li~~k~~~~~-----~~~~~~~i~l~~-------~~~~~~~~f~i~~--~~~~~l~a~s~~ek~~W 287 (294)
.++.+.++|.+.+..|+..+.... .....+.|.+.. +...-+++|.|.+ +..|+|+|.|.++.+.|
T Consensus 36 ~r~Wk~rw~vL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~kr~~~f~i~~~~~~~~~f~a~s~~e~~~W 115 (263)
T 3a8p_A 36 RRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENW 115 (263)
T ss_dssp TCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHH
T ss_pred CCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHH
T ss_conf 89873799999799999994766355666568875797366389988655677634878659982999976999999999
Q ss_pred HHHHHHC
Q ss_conf 9999719
Q T0535 288 YGCLSRA 294 (294)
Q Consensus 288 ~~~i~~A 294 (294)
+.+|+.|
T Consensus 116 i~ai~~a 122 (263)
T 3a8p_A 116 VTAIHSA 122 (263)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999999
No 46
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.10 E-value=0.002 Score=37.49 Aligned_cols=71 Identities=20% Similarity=0.337 Sum_probs=44.0
Q ss_pred CCCCEEEEEE---CCEEEEEEEECCC----EEEEEEEEEECC----------CCCCCCCEEEEEE-CCEEEEEECCHHHH
Q ss_conf 5420025651---5537999861487----278755664122----------5566760178870-83899981898999
Q T0535 223 KNRRPRHLFL---NDVLLYTYPQKDG----KYRLKNTLAVSR----------PVEKVPYALKIET-SESCLLSASSCAER 284 (294)
Q Consensus 223 ~~~~~~~fLf---~D~li~~k~~~~~----~~~~~~~i~l~~----------~~~~~~~~f~i~~-~~~~~l~a~s~~ek 284 (294)
++.+.|+|.+ .+.|.+.+..... ... ...+.+.. ......++|.|.+ ...+.|+|.|.+|+
T Consensus 30 k~wkrRwFvL~~~~~~L~Yy~~~~~~~~~g~~~-l~~i~l~~~~~~~~~~~~~~~~~~~~~~i~t~~r~~~l~A~s~~e~ 108 (126)
T 1v5p_A 30 GKFLRRYFILDTQANCLLWYMDNPQNLAVGAGA-VGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDL 108 (126)
T ss_dssp SCEEEEEEEEETTTTEEEEESSCTTTSCTTCCC-SEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHH
T ss_pred CCCEEEEEEEECCCCEEEEEECCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHH
T ss_conf 981588999975798289974143434222345-6753112332112123200246531578607980599978999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999719
Q T0535 285 DEWYGCLSRA 294 (294)
Q Consensus 285 ~~W~~~i~~A 294 (294)
..|+++|++|
T Consensus 109 ~~Wi~aL~~a 118 (126)
T 1v5p_A 109 KDWVEALNQA 118 (126)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
T ss_conf 9999999998
No 47
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.07 E-value=0.00074 Score=40.14 Aligned_cols=89 Identities=22% Similarity=0.313 Sum_probs=50.1
Q ss_pred CCCCCCCCCCCCCCCCC---CCCCEEEE-EECCEEEEEEEEC-CCEEEEEEEEEECCC---------------CCCCCCE
Q ss_conf 02144543346431234---54200256-5155379998614-872787556641225---------------5667601
Q T0535 206 LQPGREFLKEGTLKVTG---KNRRPRHL-FLNDVLLYTYPQK-DGKYRLKNTLAVSRP---------------VEKVPYA 265 (294)
Q Consensus 206 ~~~~r~~i~~g~~~~~~---~~~~~~~f-Lf~D~li~~k~~~-~~~~~~~~~i~l~~~---------------~~~~~~~ 265 (294)
....+..+++|.+...+ ++.+.|+| |.++.+.+..... ...-..+..+.+... .....++
T Consensus 12 ~~~~~~v~k~G~L~K~~~~~k~Wk~RyfvL~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~~~~ 91 (129)
T 1x1g_A 12 VELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNL 91 (129)
T ss_dssp CTTCSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSC
T ss_pred CCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEE
T ss_conf 34789889999999987899997158999978952899986753423123258668889985123344444344453203
Q ss_pred EEEEE--CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 78870--838999818989999999999719
Q T0535 266 LKIET--SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 266 f~i~~--~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
|.+.. ...+.|+|.|.+|++.|+++|++|
T Consensus 92 ~~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~ 122 (129)
T 1x1g_A 92 FKVITKDDTHYYIQASSKAERAEWIEAIKKL 122 (129)
T ss_dssp EEECCTTCCCEEECCSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 7887599839999889999999999999998
No 48
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.06 E-value=0.0024 Score=36.95 Aligned_cols=85 Identities=15% Similarity=0.127 Sum_probs=48.2
Q ss_pred CCCCCCCCCCCCC---CCCCEEEEEE-CC-EEEEEEEECCCEEEEE-----EEEEEC------C----CCCCCCCEEEEE
Q ss_conf 4543346431234---5420025651-55-3799986148727875-----566412------2----556676017887
Q T0535 210 REFLKEGTLKVTG---KNRRPRHLFL-ND-VLLYTYPQKDGKYRLK-----NTLAVS------R----PVEKVPYALKIE 269 (294)
Q Consensus 210 r~~i~~g~~~~~~---~~~~~~~fLf-~D-~li~~k~~~~~~~~~~-----~~i~l~------~----~~~~~~~~f~i~ 269 (294)
...+++|.+...+ ++.+.++|.+ .| .|.+.+........-. ..+.+. . .....+++|.|.
T Consensus 6 ~~vik~G~L~K~~~~~k~WkkR~fvL~~~~~L~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 85 (130)
T 2d9v_A 6 SGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVN 85 (130)
T ss_dssp CCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEE
T ss_pred CCCEEEEEEEEECCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCEEECCCCEEEEEEEEEEEEEECCCCCCCCCEEEEE
T ss_conf 99528999999899989962789999899128999571235667566115443887510157665146777776069994
Q ss_pred EC--CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 08--38999818989999999999719
Q T0535 270 TS--ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 270 ~~--~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
.. ..+.|+|.|.+|++.|+.+|++|
T Consensus 86 ~~~~~~~~l~a~s~~e~~~Wv~al~~a 112 (130)
T 2d9v_A 86 LREGSRLHLCAETRDDAIAWKTALMEA 112 (130)
T ss_dssp ETTSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 478569999889999999999999998
No 49
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=97.06 E-value=0.0011 Score=39.16 Aligned_cols=69 Identities=17% Similarity=0.248 Sum_probs=42.3
Q ss_pred CCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECC----------CCCCCCCEEEEEEC--CEEEEEECCHHHHHHHHHH
Q ss_conf 420025651-5537999861487278755664122----------55667601788708--3899981898999999999
Q T0535 224 NRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSR----------PVEKVPYALKIETS--ESCLLSASSCAERDEWYGC 290 (294)
Q Consensus 224 ~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~----------~~~~~~~~f~i~~~--~~~~l~a~s~~ek~~W~~~ 290 (294)
+...++|.+ ++.|.+.+.... ..-.+.+++.. ...+.+++|.|.+. ..+.|+|.|.+|++.|+.+
T Consensus 22 ~Wkkr~fvL~~~~L~yy~~~~~--~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~e~~~Wi~a 99 (108)
T 1u5d_A 22 EWQKRWCVVSRGLFYYYANEKS--KQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQ 99 (108)
T ss_dssp EEEEEEEEEETTEEEEESSTTC--SSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHH
T ss_pred CCEEEEEEEECCEEEEEECCCC--CCCCEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHH
T ss_conf 8469999998999999834677--65312487258567530000135677751268869982999991999999999999
Q ss_pred HHHC
Q ss_conf 9719
Q T0535 291 LSRA 294 (294)
Q Consensus 291 i~~A 294 (294)
|++|
T Consensus 100 i~~~ 103 (108)
T 1u5d_A 100 ISFL 103 (108)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 50
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.02 E-value=0.0018 Score=37.80 Aligned_cols=81 Identities=17% Similarity=0.208 Sum_probs=50.1
Q ss_pred CCCCCCCCCCCC---CCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECC--------CCCCCCCEEEEEE-CCEEEEEE
Q ss_conf 433464312345---420025651-5537999861487278755664122--------5566760178870-83899981
Q T0535 212 FLKEGTLKVTGK---NRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSR--------PVEKVPYALKIET-SESCLLSA 278 (294)
Q Consensus 212 ~i~~g~~~~~~~---~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~--------~~~~~~~~f~i~~-~~~~~l~a 278 (294)
..++|.+...+. +.+.++|.+ .+.|.+.+...+.. .+..++|.. +....++.|.|.. .+.++|+|
T Consensus 18 ~~~~G~L~kk~~~~k~WkkRwfvL~~~~L~yY~~~~~~~--~~~~i~L~~~~~~~~~~~~~~~~~~F~l~t~~~~~~f~A 95 (149)
T 1x1f_A 18 LYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSII--YVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKT 95 (149)
T ss_dssp EEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSCSS--CSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEEC
T ss_pred CCEEEEEEEECCCCCCEEEEEEEEECCEEEEEECCCCCC--CCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEEEE
T ss_conf 337999998789999737889999899999985356565--311001334002101010146742565047863799992
Q ss_pred CCHHHHHHHHHHHHHC
Q ss_conf 8989999999999719
Q T0535 279 SSCAERDEWYGCLSRA 294 (294)
Q Consensus 279 ~s~~ek~~W~~~i~~A 294 (294)
.|.+|+..|+.+|..|
T Consensus 96 es~~e~~~Wi~aI~~~ 111 (149)
T 1x1f_A 96 ENTESGEEWRGFILTV 111 (149)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
T ss_conf 9999999999999998
No 51
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=96.99 E-value=0.0028 Score=36.62 Aligned_cols=72 Identities=19% Similarity=0.313 Sum_probs=45.8
Q ss_pred CCCCEEEEEECCEEEEEEEECCCEE---EEEEEEEE-------CCCCCCCCCEEEEEEC-CEEEEEECCHHHHHHHHHHH
Q ss_conf 5420025651553799986148727---87556641-------2255667601788708-38999818989999999999
Q T0535 223 KNRRPRHLFLNDVLLYTYPQKDGKY---RLKNTLAV-------SRPVEKVPYALKIETS-ESCLLSASSCAERDEWYGCL 291 (294)
Q Consensus 223 ~~~~~~~fLf~D~li~~k~~~~~~~---~~~~~i~l-------~~~~~~~~~~f~i~~~-~~~~l~a~s~~ek~~W~~~i 291 (294)
+..+.++|.+.+-.|..-+...... .....|.+ .......+++|.|.+. ..++|+|.|.++.+.|+.+|
T Consensus 27 k~Wk~rwfVL~~~~L~yyk~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~l~~~~~~~~l~A~s~~e~~~Wi~aL 106 (168)
T 2j59_M 27 RPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTI 106 (168)
T ss_dssp -CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCEEEEECCCHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHH
T ss_conf 87189999998999999625133123566530466456899861266776422799769988999769999999999999
Q ss_pred HHC
Q ss_conf 719
Q T0535 292 SRA 294 (294)
Q Consensus 292 ~~A 294 (294)
+.|
T Consensus 107 ~~a 109 (168)
T 2j59_M 107 QES 109 (168)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 52
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=96.99 E-value=0.0025 Score=36.91 Aligned_cols=80 Identities=23% Similarity=0.210 Sum_probs=48.9
Q ss_pred CCCCCCCCC---CCCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECC-------CCCCCCCEEEEEE-CCEEEEEECC
Q ss_conf 334643123---45420025651-5537999861487278755664122-------5566760178870-8389998189
Q T0535 213 LKEGTLKVT---GKNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSR-------PVEKVPYALKIET-SESCLLSASS 280 (294)
Q Consensus 213 i~~g~~~~~---~~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~-------~~~~~~~~f~i~~-~~~~~l~a~s 280 (294)
.++|.+... .+....++|.+ ++.|.+.+.... ...++.++|.. ...+.+++|.|.+ +..++|+|.|
T Consensus 19 ~keG~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~--~~~~g~i~L~~~~~v~~~~~~~~~~~f~i~~~~r~~~~~a~s 96 (126)
T 1fao_A 19 TKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMS--PEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKT 96 (126)
T ss_dssp CEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC--SSCSEEEEGGGCCEEEEECSSSSSSEEEEEETTEEEEEECSS
T ss_pred CEEEEEEEECCCCCCEEEEEEEEECCEEEEECCCCC--CCCCCCEECCCCEEEEEECCCCCCCEEEEEECCEEEEEECCC
T ss_conf 779999982799998788999998999989755666--664351320361898640245676335761099699999299
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 89999999999719
Q T0535 281 CAERDEWYGCLSRA 294 (294)
Q Consensus 281 ~~ek~~W~~~i~~A 294 (294)
.+++..|+.+|+.|
T Consensus 97 ~~e~~~Wi~ai~~~ 110 (126)
T 1fao_A 97 GVEADEWIKILRWK 110 (126)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 53
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckstrin homology domain, coiled coil, guanine-nucleotide releasing factor; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=96.93 E-value=0.0019 Score=37.69 Aligned_cols=80 Identities=21% Similarity=0.340 Sum_probs=46.7
Q ss_pred CCCCCCCCCC---CCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECC------CCCCCCCEEEEEE------------
Q ss_conf 3346431234---5420025651-5537999861487278755664122------5566760178870------------
Q T0535 213 LKEGTLKVTG---KNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSR------PVEKVPYALKIET------------ 270 (294)
Q Consensus 213 i~~g~~~~~~---~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~------~~~~~~~~f~i~~------------ 270 (294)
.++|.+...+ ++++.|+|.+ ++.|.+.+..... ..++.++|.. ...+.+++|.+.+
T Consensus 214 ~~~G~L~K~g~~~k~WKrRwFVL~~~~L~Yyk~~~~~--~p~G~I~L~~~~V~~~~~~~~~~~f~i~~~~~~~~~~~~~~ 291 (347)
T 2r09_A 214 DREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDK--EPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKACK 291 (347)
T ss_dssp CEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCS--SCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEE
T ss_pred CCEEEEEEECCCCCCEEEEEEEEECCCEEEECCCCCC--CCCEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 7558678866888850579999908957897887776--78537766872899805778887079865766654332334
Q ss_pred -----------CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf -----------838999818989999999999719
Q T0535 271 -----------SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 271 -----------~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
...|.|+|.|.+|++.|+++|+.|
T Consensus 292 ~~~~~~~~~~~~r~y~L~AeS~~e~~~WI~AI~~a 326 (347)
T 2r09_A 292 TEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKAS 326 (347)
T ss_dssp ECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 44453132169769999897999999999999999
No 54
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.91 E-value=0.0011 Score=39.15 Aligned_cols=72 Identities=15% Similarity=0.196 Sum_probs=43.5
Q ss_pred CCCCEEEEEECCEEEEEEEECCC-EEEEEEEEEEC-------CCCCCCCCEEEEEE-----CCEEEEEECCHHHHHHHHH
Q ss_conf 54200256515537999861487-27875566412-------25566760178870-----8389998189899999999
Q T0535 223 KNRRPRHLFLNDVLLYTYPQKDG-KYRLKNTLAVS-------RPVEKVPYALKIET-----SESCLLSASSCAERDEWYG 289 (294)
Q Consensus 223 ~~~~~~~fLf~D~li~~k~~~~~-~~~~~~~i~l~-------~~~~~~~~~f~i~~-----~~~~~l~a~s~~ek~~W~~ 289 (294)
++.+.++|.+.|-.|+.-+.... .-.....+.+. ....+.+++|.+.. ...+.|+|.|.+|+++|++
T Consensus 26 k~WkkrwfvL~~~~L~yyks~~d~~~~p~~~i~L~~~~v~~~~~~~~~~~~f~l~~~~~~~~~~~~l~aese~e~~~Wi~ 105 (137)
T 2ys3_A 26 KGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMA 105 (137)
T ss_dssp SSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEEEEECCEEEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCHHHHHHHHH
T ss_conf 78447899998999999955654346844788536359975577666663299997437996699999099999999999
Q ss_pred HHHHC
Q ss_conf 99719
Q T0535 290 CLSRA 294 (294)
Q Consensus 290 ~i~~A 294 (294)
+|..|
T Consensus 106 Al~~A 110 (137)
T 2ys3_A 106 GCRLA 110 (137)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99998
No 55
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.87 E-value=0.0013 Score=38.55 Aligned_cols=83 Identities=19% Similarity=0.247 Sum_probs=46.1
Q ss_pred CCCCCCCCCCC---CCCCEEEEEE-CCEEEEEEEECC--CEEEEEEEEEECCC----CCCCCCEEEEE--ECCEEEEEEC
Q ss_conf 43346431234---5420025651-553799986148--72787556641225----56676017887--0838999818
Q T0535 212 FLKEGTLKVTG---KNRRPRHLFL-NDVLLYTYPQKD--GKYRLKNTLAVSRP----VEKVPYALKIE--TSESCLLSAS 279 (294)
Q Consensus 212 ~i~~g~~~~~~---~~~~~~~fLf-~D~li~~k~~~~--~~~~~~~~i~l~~~----~~~~~~~f~i~--~~~~~~l~a~ 279 (294)
-+.+|.+...+ ++.+.|+|.+ +|.+++...+.. ..-..+..+++... ..+.++.|.+. +.+.+.|+|.
T Consensus 8 ~~k~G~L~K~~~~~k~WkkR~fvL~~~~~~l~y~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 87 (120)
T 2d9x_A 8 ENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSDEDSHTFTVNAASGEQYKLRAT 87 (120)
T ss_dssp CCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCCEECCSSSSSCEEECCSSSCCEEECCS
T ss_pred CEEEEEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCEEEEEEC
T ss_conf 80799999856898981488999957986598732544332243034344667997640564057999518809999959
Q ss_pred CHHHHHHHHHHHHHC
Q ss_conf 989999999999719
Q T0535 280 SCAERDEWYGCLSRA 294 (294)
Q Consensus 280 s~~ek~~W~~~i~~A 294 (294)
|.+|++.|+.+|+.|
T Consensus 88 s~~e~~~Wi~al~~a 102 (120)
T 2d9x_A 88 DAKERQHWVSRLQIC 102 (120)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 56
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.86 E-value=0.0056 Score=34.77 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=45.9
Q ss_pred CCCCCCCCCCCC---CCCCEEEEEE--CCEEEEEEEECCCEEEEEEEEEECC--------CC------CCCCCEEEEE-E
Q ss_conf 543346431234---5420025651--5537999861487278755664122--------55------6676017887-0
Q T0535 211 EFLKEGTLKVTG---KNRRPRHLFL--NDVLLYTYPQKDGKYRLKNTLAVSR--------PV------EKVPYALKIE-T 270 (294)
Q Consensus 211 ~~i~~g~~~~~~---~~~~~~~fLf--~D~li~~k~~~~~~~~~~~~i~l~~--------~~------~~~~~~f~i~-~ 270 (294)
..+++|.+...+ ++.+.++|.+ ++..++........ ..++.|++.. .. ....+.|.+. +
T Consensus 7 ~~~~eG~L~K~~~~~k~Wkkr~fvL~~~~~~l~~~~~~~~~-~~~g~i~l~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 85 (117)
T 1v5u_A 7 GRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDT-ECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTT 85 (117)
T ss_dssp SSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCS-SCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEES
T ss_pred CCEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCHH-CCCCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECC
T ss_conf 97289999988899999328999993778768874351000-02350552664798404653101113564248997249
Q ss_pred CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 838999818989999999999719
Q T0535 271 SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 271 ~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
++.+.|+|.|.+|++.|+++|++|
T Consensus 86 ~~~~~~~a~s~~e~~~Wi~~l~~a 109 (117)
T 1v5u_A 86 RRVYNFCAQDVPSAQQWVDRIQSC 109 (117)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 947999829999999999999999
No 57
>2dhi_A Evectin-2, pleckstrin homology domain-containing family B member 2; PH domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.83 E-value=0.0032 Score=36.23 Aligned_cols=85 Identities=19% Similarity=0.209 Sum_probs=48.0
Q ss_pred CCCCCCCCCCCCC---CCCCEEEEEE-CCEEEEEEEECCCE-----EEE-EEEEEE---C-------CCCCCCCCEEEEE
Q ss_conf 4543346431234---5420025651-55379998614872-----787-556641---2-------2556676017887
Q T0535 210 REFLKEGTLKVTG---KNRRPRHLFL-NDVLLYTYPQKDGK-----YRL-KNTLAV---S-------RPVEKVPYALKIE 269 (294)
Q Consensus 210 r~~i~~g~~~~~~---~~~~~~~fLf-~D~li~~k~~~~~~-----~~~-~~~i~l---~-------~~~~~~~~~f~i~ 269 (294)
...+++|.+...+ +..+.++|.+ .|.+++........ ... ...+.+ . ....+.+++|.|.
T Consensus 6 ~~~ik~G~L~k~~~~~k~WkkRwfvL~~~~~l~y~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 85 (120)
T 2dhi_A 6 SGFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQSIEDKVHMPVDCINIRTGHECRDIQPPDGKPRDCLLQIV 85 (120)
T ss_dssp CCCSCEEEEEEECTTTCSEEEEEEEECTTSCEEEESSTTCCSCCEEECTTTTEEEEECGGGSCSCCCCTTCCSTTEEEEE
T ss_pred CCCCEEEEEEEECCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEE
T ss_conf 99608999999799989963889999499679997784654215504135305898621112022233457877279999
Q ss_pred EC--CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 08--38999818989999999999719
Q T0535 270 TS--ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 270 ~~--~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+. ..++|+|.|.+|++.|+++|.+|
T Consensus 86 ~~~~~~~~~~a~s~~e~~~Wi~al~~a 112 (120)
T 2dhi_A 86 CRDGKTISLCAESTDDCLAWKFTLQDS 112 (120)
T ss_dssp ESSSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred ECCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 348759999829999999999999998
No 58
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=96.82 E-value=0.002 Score=37.44 Aligned_cols=85 Identities=22% Similarity=0.288 Sum_probs=47.6
Q ss_pred CCCCCCCCCCCC---CCCCCEEEEEEC-CEEEEEEEECCCEEEEEEEEEECC------------CCCCCCCEEEEEE--C
Q ss_conf 454334643123---454200256515-537999861487278755664122------------5566760178870--8
Q T0535 210 REFLKEGTLKVT---GKNRRPRHLFLN-DVLLYTYPQKDGKYRLKNTLAVSR------------PVEKVPYALKIET--S 271 (294)
Q Consensus 210 r~~i~~g~~~~~---~~~~~~~~fLf~-D~li~~k~~~~~~~~~~~~i~l~~------------~~~~~~~~f~i~~--~ 271 (294)
+..+++|.+... .++.+.++|.+. +.+.+........-..+..|++.. .....+++|.+.. .
T Consensus 16 g~v~k~G~L~K~~~~~k~WkkR~fvL~~~~l~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (129)
T 1x05_A 16 GVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADE 95 (129)
T ss_dssp SEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTC
T ss_pred CCEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 98899989997189999952699999348656888612335552332775114752125642212356773578980798
Q ss_pred CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 38999818989999999999719
Q T0535 272 ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 ~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
..+.|+|.|.+|++.|+++|..|
T Consensus 96 ~~~~~~a~s~~e~~~W~~~i~~a 118 (129)
T 1x05_A 96 VHYFLQAATPKERTEWIKAIQMA 118 (129)
T ss_dssp CCCEEECSSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHH
T ss_conf 09999879999999999999999
No 59
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=96.82 E-value=0.0026 Score=36.78 Aligned_cols=82 Identities=11% Similarity=0.196 Sum_probs=47.8
Q ss_pred CCCCCCCCC---CCCCCEEEEEECCEEE-EEEEECC-------CEEEEEEEEEEC--------CCCCCCCCEEEEEEC--
Q ss_conf 334643123---4542002565155379-9986148-------727875566412--------255667601788708--
Q T0535 213 LKEGTLKVT---GKNRRPRHLFLNDVLL-YTYPQKD-------GKYRLKNTLAVS--------RPVEKVPYALKIETS-- 271 (294)
Q Consensus 213 i~~g~~~~~---~~~~~~~~fLf~D~li-~~k~~~~-------~~~~~~~~i~l~--------~~~~~~~~~f~i~~~-- 271 (294)
.++|.+... .+..+.|+|.+.+-.| +.+.... ........+++. .+....+++|.|.+.
T Consensus 13 ~k~G~L~kk~~~~k~WkkR~fvL~~~~L~y~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~F~i~~~~~ 92 (124)
T 2w2x_D 13 KQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQ 92 (124)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC-
T ss_pred CEEEEEEEECCCCCCEEEEEEEEECCEEEEEECCCCCCCEEECCCCCCEEECCCCCCCCCEEEECCCCCCCEEEEEECCC
T ss_conf 57999997379999868989999999988974136530000002332100001246531100000356541378751367
Q ss_pred --CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf --38999818989999999999719
Q T0535 272 --ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 --~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
..+.|+|.|.+|+.+|+.+|.+|
T Consensus 93 ~~r~~~~~A~s~~e~~~Wi~aI~~a 117 (124)
T 2w2x_D 93 GDPPVEFATDKVEELFEWFQSIREI 117 (124)
T ss_dssp -CCCEEEEECCCHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 7469999869999999999999999
No 60
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.79 E-value=0.0034 Score=36.11 Aligned_cols=83 Identities=23% Similarity=0.231 Sum_probs=44.4
Q ss_pred CCCCCCCCCC-----CCCCCEEEEEECC-------EEEEEEEECCC--EEEEEEEEEECC-----------CCCCCCCEE
Q ss_conf 4334643123-----4542002565155-------37999861487--278755664122-----------556676017
Q T0535 212 FLKEGTLKVT-----GKNRRPRHLFLND-------VLLYTYPQKDG--KYRLKNTLAVSR-----------PVEKVPYAL 266 (294)
Q Consensus 212 ~i~~g~~~~~-----~~~~~~~~fLf~D-------~li~~k~~~~~--~~~~~~~i~l~~-----------~~~~~~~~f 266 (294)
.+++|.+... .+..+.|+|.+.+ .|-+.+..... .-..+..|+|.. ......++|
T Consensus 12 ~vk~G~L~K~~~~~~~k~WkkRwfvL~~~~~~~~~~L~yy~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~F 91 (127)
T 2d9w_A 12 AVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDTSAF 91 (127)
T ss_dssp SSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSCEEE
T ss_pred CEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 05998999725788888767999999277446411567981754345244306789872530122245323577875289
Q ss_pred EEEECCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 8870838999818989999999999719
Q T0535 267 KIETSESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 267 ~i~~~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
.|.+.+...+.|.+.+|++.|+.+|++|
T Consensus 92 ~i~t~~r~~~~aa~~ee~~~Wi~al~~~ 119 (127)
T 2d9w_A 92 FLETKERLYLLAAPAAERGDWVQAICLL 119 (127)
T ss_dssp EEEESSCEEEEEECHHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 9996998999847969999999999998
No 61
>2kcj_A Pleckstrin homology domain-containing family A member 3; FAPP1, PH domain, cytoplasm, lipid-binding, membrane, membrane protein; NMR {Homo sapiens}
Probab=96.79 E-value=0.0012 Score=38.76 Aligned_cols=82 Identities=22% Similarity=0.306 Sum_probs=46.4
Q ss_pred CCCCCCCCCC---CCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEEC----CCCCCCCCEEEEEE--CCEEEEEECCHH
Q ss_conf 3346431234---5420025651-553799986148727875566412----25566760178870--838999818989
Q T0535 213 LKEGTLKVTG---KNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVS----RPVEKVPYALKIET--SESCLLSASSCA 282 (294)
Q Consensus 213 i~~g~~~~~~---~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~----~~~~~~~~~f~i~~--~~~~~l~a~s~~ 282 (294)
..+|.+...+ ++.+.++|.+ ++.|.+.+............+.+. ......++.|.+.. .+.+.|+|.|.+
T Consensus 8 ~~eG~L~Kr~~~~k~WkkR~fvL~~~~L~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~r~~~~~a~s~~ 87 (108)
T 2kcj_A 8 FMEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHSADNTRMELIIPGEQHFYMKAVNAA 87 (108)
T ss_dssp CEEEEEEEECCTTTCEEEEEEEEETTEEEEESSHHHHHHCCSCEEEGGGSEEECCSCCSSEEEEECTTTCCEEEECSSHH
T ss_pred CEEEEEEEECCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCEEECCCEEEEECCCCCCCEEEEECCCEEEEEECCCHH
T ss_conf 67999997828999900189999899999996376564442010312205774001555315999759949999869999
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999719
Q T0535 283 ERDEWYGCLSRA 294 (294)
Q Consensus 283 ek~~W~~~i~~A 294 (294)
+++.|+.+|+.|
T Consensus 88 e~~~Wi~ai~~a 99 (108)
T 2kcj_A 88 ERQRWLVALGSS 99 (108)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 62
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.77 E-value=0.0031 Score=36.29 Aligned_cols=81 Identities=26% Similarity=0.326 Sum_probs=45.4
Q ss_pred CCCCCCCCCCC--CCCCEEEEEECC-EEEEEEEECCCEEEEEEEEEEC------CCCCCCCCEEEEEE------------
Q ss_conf 43346431234--542002565155-3799986148727875566412------25566760178870------------
Q T0535 212 FLKEGTLKVTG--KNRRPRHLFLND-VLLYTYPQKDGKYRLKNTLAVS------RPVEKVPYALKIET------------ 270 (294)
Q Consensus 212 ~i~~g~~~~~~--~~~~~~~fLf~D-~li~~k~~~~~~~~~~~~i~l~------~~~~~~~~~f~i~~------------ 270 (294)
.+++|.++..+ ++.+.|+|.+.+ .|.+.+.... -...+.|+|. .+....+++|.+..
T Consensus 8 ~~k~GwLkkr~~~k~WkrR~fvL~~~~L~yy~~~~~--~~~~g~i~L~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 85 (130)
T 1v88_A 8 IVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQKN--GQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGP 85 (130)
T ss_dssp CCEEEEEEECCSSSSCEEEEEEEETTEEEEESCSSS--CCCCEEEECSSCEECCCCTTTSSCEEEEECTTCCCCSCSSCT
T ss_pred CEEEEEEEECCCCCCCEEEEEEEECCEEEEECCCCC--CCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 649808997998998138899996999979857886--653452115875999866567885289986887520112566
Q ss_pred -------------CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf -------------838999818989999999999719
Q T0535 271 -------------SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 271 -------------~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
...++|+|.|.+|+..|+++|+.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~a 122 (130)
T 1v88_A 86 KGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELA 122 (130)
T ss_dssp TSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 5555315886179889999889999999999999999
No 63
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=96.74 E-value=0.0045 Score=35.33 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=29.7
Q ss_pred CCCCCCEEEEEE--CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 566760178870--838999818989999999999719
Q T0535 259 VEKVPYALKIET--SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 259 ~~~~~~~f~i~~--~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
....+++|.+.+ ...++|+|.|.+|+..|+++|+.|
T Consensus 85 ~~~~~~~f~~~~~~~~~~~~~a~s~~e~~~Wv~al~~a 122 (129)
T 2p0d_A 85 LSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTV 122 (129)
T ss_dssp SCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 57764289875379829999879999999999999999
No 64
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.67 E-value=0.0058 Score=34.65 Aligned_cols=32 Identities=13% Similarity=0.266 Sum_probs=25.8
Q ss_pred CCEEEEE-ECCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 6017887-0838999818989999999999719
Q T0535 263 PYALKIE-TSESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 263 ~~~f~i~-~~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
.+.|.+. ....+.|+|.|.+|++.|+++|++|
T Consensus 76 ~~~~~i~~~~~~~~f~A~s~~e~~~Wv~al~~a 108 (126)
T 1wi1_A 76 RAFFNAVKEGDTVIFASDDEQDRILWVQAMYRA 108 (126)
T ss_dssp SSEEEEECSSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 035884279859999969999999999999999
No 65
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.67 E-value=0.0019 Score=37.67 Aligned_cols=34 Identities=6% Similarity=0.250 Sum_probs=28.7
Q ss_pred CCCCEEEEEEC--CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 67601788708--38999818989999999999719
Q T0535 261 KVPYALKIETS--ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 261 ~~~~~f~i~~~--~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+-+|+|.|.+. ..|.|+|.|.+|++.|+.+|+.|
T Consensus 93 ~~~~~F~i~t~~~~~y~~~A~s~~e~~~Wv~ai~~a 128 (136)
T 1v5m_A 93 EKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGC 128 (136)
T ss_dssp CCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 776479998589968999859999999999999999
No 66
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 1p6s_A
Probab=96.64 E-value=0.0063 Score=34.44 Aligned_cols=84 Identities=25% Similarity=0.373 Sum_probs=48.9
Q ss_pred CCCCCCCCCCCCC---CCCCEEEEEE-CC-EEEEEEEECCCE----EEEEEEEEEC-----CCCCCCCCEEEEEEC----
Q ss_conf 4543346431234---5420025651-55-379998614872----7875566412-----255667601788708----
Q T0535 210 REFLKEGTLKVTG---KNRRPRHLFL-ND-VLLYTYPQKDGK----YRLKNTLAVS-----RPVEKVPYALKIETS---- 271 (294)
Q Consensus 210 r~~i~~g~~~~~~---~~~~~~~fLf-~D-~li~~k~~~~~~----~~~~~~i~l~-----~~~~~~~~~f~i~~~---- 271 (294)
...+++|.+...+ ++.+.|+|.+ .| .+++.+...... ..+ ..+.+. ....+.+++|.|.+.
T Consensus 6 ~~v~keG~L~K~~~~~k~Wk~RwfvL~~~~~l~~y~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~ 84 (125)
T 1unq_A 6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPL-NNFSVAQCQLMKTERPRPNTFIIRCLQWTT 84 (125)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCS-EEEECTTCEEEEECSSSTTEEEEEEEETTE
T ss_pred CCEEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCC-CCEEEECCCCCCCCCCCCCEEEEEECCCCC
T ss_conf 9799999999989999996788999968922899826887764553034-305760221001432477239999547666
Q ss_pred -CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf -38999818989999999999719
Q T0535 272 -ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 272 -~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
..++|+|.|.+|++.|+.+|+.|
T Consensus 85 ~~~~~f~a~s~~e~~~Wv~ai~~~ 108 (125)
T 1unq_A 85 VIERTFHVETPEEREEWTTAIQTV 108 (125)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 205999909999999999999999
No 67
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.60 E-value=0.0037 Score=35.86 Aligned_cols=82 Identities=15% Similarity=0.188 Sum_probs=49.3
Q ss_pred CCCCCCCCCCC---CCCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECCC-------------CCCCCCEEEEEEC-C
Q ss_conf 54334643123---45420025651-55379998614872787556641225-------------5667601788708-3
Q T0535 211 EFLKEGTLKVT---GKNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSRP-------------VEKVPYALKIETS-E 272 (294)
Q Consensus 211 ~~i~~g~~~~~---~~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~~-------------~~~~~~~f~i~~~-~ 272 (294)
..+++|.+... .+..+.|+|.+ .+.|.+.+..... ..++.|+|... ..+.+++|.|.+. .
T Consensus 7 ~vik~GwL~K~~~~~k~WkrRwFvL~~~~L~Yyk~~~~~--~~~g~I~L~~~~~V~~~~~~~~~~~~~~~~~F~I~T~~r 84 (125)
T 2coa_A 7 GTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTN--RYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANA 84 (125)
T ss_dssp SCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSSCS--SCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSSC
T ss_pred CCEEEEEEEEECCCCCCEEEEEEEEEEEEEEEECCCCCC--CCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 853888459987899871589999972144464367655--546521331000000244434445567723899961892
Q ss_pred EEEEEE-----------CCHHHHHHHHHHHHHC
Q ss_conf 899981-----------8989999999999719
Q T0535 273 SCLLSA-----------SSCAERDEWYGCLSRA 294 (294)
Q Consensus 273 ~~~l~a-----------~s~~ek~~W~~~i~~A 294 (294)
.|.++| .+.+++..|+++|.+|
T Consensus 85 ~Y~~~~~~~~~~~~~~~~~~~~~~~W~~aI~~A 117 (125)
T 2coa_A 85 TYFVGEMPGGTPGGPSGQGAEAARGWETAIRQA 117 (125)
T ss_dssp CCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 089865887666554345869999999999998
No 68
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=96.58 E-value=0.016 Score=32.05 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=44.9
Q ss_pred CCCCCEEEEEEC-CEEEEEEEECC----------CEEEEEEE-EEECCCCCCCCCEEEEEE--CCEEEEEECCHHHHHHH
Q ss_conf 454200256515-53799986148----------72787556-641225566760178870--83899981898999999
Q T0535 222 GKNRRPRHLFLN-DVLLYTYPQKD----------GKYRLKNT-LAVSRPVEKVPYALKIET--SESCLLSASSCAERDEW 287 (294)
Q Consensus 222 ~~~~~~~~fLf~-D~li~~k~~~~----------~~~~~~~~-i~l~~~~~~~~~~f~i~~--~~~~~l~a~s~~ek~~W 287 (294)
.+..+.++|.+. +.|.+.+...+ +.+.+... +....+....+++|.+.. +..+.|+|.|.+|++.|
T Consensus 20 ~k~W~~r~fvL~~~~L~~y~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~e~~~W 99 (106)
T 1btn_A 20 SRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTW 99 (106)
T ss_dssp CCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHH
T ss_pred CCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHH
T ss_conf 89976999999699888996133212466647532597046088851345677648997517982999986999999999
Q ss_pred HHHHHHC
Q ss_conf 9999719
Q T0535 288 YGCLSRA 294 (294)
Q Consensus 288 ~~~i~~A 294 (294)
+.+|+.|
T Consensus 100 ~~ai~~A 106 (106)
T 1btn_A 100 IQAISSA 106 (106)
T ss_dssp HHHHHHC
T ss_pred HHHHHHC
T ss_conf 9999749
No 69
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=96.44 E-value=0.01 Score=33.19 Aligned_cols=35 Identities=31% Similarity=0.425 Sum_probs=29.4
Q ss_pred CCCCCEEEEEEC-CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 667601788708-38999818989999999999719
Q T0535 260 EKVPYALKIETS-ESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 260 ~~~~~~f~i~~~-~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
...+++|.|.+. +.+.|+|.|.+|++.|+.+|++|
T Consensus 75 ~k~~~~f~I~T~~r~~~L~AeSe~e~~~Wv~aL~~~ 110 (264)
T 1qqg_A 75 SKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQL 110 (264)
T ss_dssp SSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 777439999719918999909999999999999999
No 70
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.37 E-value=0.0061 Score=34.55 Aligned_cols=72 Identities=18% Similarity=0.186 Sum_probs=42.7
Q ss_pred CCCCEEEEEEC-CEEEEEEEECC----CEEEEEEEEE-------ECCCCCCCCCEEEEEE--CCEEEEEECCHHHHHHHH
Q ss_conf 54200256515-53799986148----7278755664-------1225566760178870--838999818989999999
Q T0535 223 KNRRPRHLFLN-DVLLYTYPQKD----GKYRLKNTLA-------VSRPVEKVPYALKIET--SESCLLSASSCAERDEWY 288 (294)
Q Consensus 223 ~~~~~~~fLf~-D~li~~k~~~~----~~~~~~~~i~-------l~~~~~~~~~~f~i~~--~~~~~l~a~s~~ek~~W~ 288 (294)
+..+.++|.+. +.|.+.+.... +.......+. ......+.+++|.+.. +..++|+|.|.+|++.|+
T Consensus 30 k~WkkrwfvL~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~a~s~~e~~~Wi 109 (123)
T 1wjm_A 30 RSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWL 109 (123)
T ss_dssp CCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHH
T ss_pred CCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHH
T ss_conf 88559999998998756606433222244123343323414888676557775389997479829999889999999999
Q ss_pred HHHHHC
Q ss_conf 999719
Q T0535 289 GCLSRA 294 (294)
Q Consensus 289 ~~i~~A 294 (294)
++|+.|
T Consensus 110 ~al~~a 115 (123)
T 1wjm_A 110 RVVNAA 115 (123)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 71
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=96.33 E-value=0.003 Score=36.44 Aligned_cols=73 Identities=16% Similarity=0.272 Sum_probs=45.1
Q ss_pred CCCCCEEEEEECCEEEEEEEECCC-----EEEEEEEEEEC-------CCCCCCCCEEEEEEC--CEEEEEECCHHHHHHH
Q ss_conf 454200256515537999861487-----27875566412-------255667601788708--3899981898999999
Q T0535 222 GKNRRPRHLFLNDVLLYTYPQKDG-----KYRLKNTLAVS-------RPVEKVPYALKIETS--ESCLLSASSCAERDEW 287 (294)
Q Consensus 222 ~~~~~~~~fLf~D~li~~k~~~~~-----~~~~~~~i~l~-------~~~~~~~~~f~i~~~--~~~~l~a~s~~ek~~W 287 (294)
.++++.++|.+.+-.|+..+.... .....+.|.+. .+....+++|.|.+. ..|+|+|.|.+|+..|
T Consensus 36 ~k~Wk~rwfvL~~~~L~yy~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~~~~~~~~~~~f~A~s~~e~~~W 115 (279)
T 3a8n_A 36 RRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENW 115 (279)
T ss_dssp CCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHH
T ss_pred CCCCEEEEEEEECCEEEEEECCHHCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHH
T ss_conf 88761899999799999995510115666667764797463699988777777536887759984899974999999999
Q ss_pred HHHHHHC
Q ss_conf 9999719
Q T0535 288 YGCLSRA 294 (294)
Q Consensus 288 ~~~i~~A 294 (294)
+.+|..|
T Consensus 116 v~al~~~ 122 (279)
T 3a8n_A 116 ITAIHSA 122 (279)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999999
No 72
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=96.26 E-value=0.0042 Score=35.51 Aligned_cols=34 Identities=26% Similarity=0.476 Sum_probs=28.1
Q ss_pred CCCCEEEEEE-------CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 6760178870-------838999818989999999999719
Q T0535 261 KVPYALKIET-------SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 261 ~~~~~f~i~~-------~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+.+++|.+.+ ...++|+|.|.+|++.|+++|.+|
T Consensus 73 ~~~~~f~i~~~~~~~~~~~~~~l~A~s~~e~~~Wv~aL~~~ 113 (117)
T 2rov_A 73 EIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKK 113 (117)
T ss_dssp TGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 67734898632321378726999849999999999999998
No 73
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=96.18 E-value=0.018 Score=31.67 Aligned_cols=25 Identities=24% Similarity=0.409 Sum_probs=21.9
Q ss_pred ECCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 0838999818989999999999719
Q T0535 270 TSESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 270 ~~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
+...+.++|.|.+|+..|+++|..|
T Consensus 94 ~~~~~~~~a~s~~e~~~Wi~aL~~a 118 (127)
T 1fgy_A 94 NHVVYRISAPSPEEKEEWMKSIKAS 118 (127)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9729999869999999999999999
No 74
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.04 E-value=0.015 Score=32.22 Aligned_cols=82 Identities=15% Similarity=0.194 Sum_probs=48.2
Q ss_pred CCCCCCCCCCC---CCCCCEEEEEE-CCEEEEEEEECCCEEEEEEEEEECCC-------------CCCCCCEEEEEECC-
Q ss_conf 54334643123---45420025651-55379998614872787556641225-------------56676017887083-
Q T0535 211 EFLKEGTLKVT---GKNRRPRHLFL-NDVLLYTYPQKDGKYRLKNTLAVSRP-------------VEKVPYALKIETSE- 272 (294)
Q Consensus 211 ~~i~~g~~~~~---~~~~~~~~fLf-~D~li~~k~~~~~~~~~~~~i~l~~~-------------~~~~~~~f~i~~~~- 272 (294)
..+++|.+... .+..+.|+|.+ .+.|.+.+...+. ..++.|+|... ....+++|.|.+.+
T Consensus 7 ~iik~GwL~K~~~~~~~Wk~RwFvL~~~~L~Yy~~~~~~--~p~g~I~L~~~~~v~~~~~~~~~~~~~~~~~F~I~t~~r 84 (129)
T 2d9z_A 7 GMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGS--KYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTM 84 (129)
T ss_dssp TSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSSCC--SCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSSC
T ss_pred CCEEEEEEEEECCCCCCEEEEEEEEECCCEEEECCCCCC--CCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCE
T ss_conf 715878479988898760689999963836995345877--735741212013210135655455667645899714760
Q ss_pred EEEE---------------EECCHHHHHHHHHHHHHC
Q ss_conf 8999---------------818989999999999719
Q T0535 273 SCLL---------------SASSCAERDEWYGCLSRA 294 (294)
Q Consensus 273 ~~~l---------------~a~s~~ek~~W~~~i~~A 294 (294)
.|.+ .|.+.++...|+++|.+|
T Consensus 85 ~y~~~~~~~~~~~~~~~~l~a~~~~~~~~W~~AI~~A 121 (129)
T 2d9z_A 85 VYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQA 121 (129)
T ss_dssp EEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 5898636777667732540248989999999999997
No 75
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=95.40 E-value=0.018 Score=31.68 Aligned_cols=33 Identities=21% Similarity=0.423 Sum_probs=27.4
Q ss_pred CCCEEEEEE--CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 760178870--838999818989999999999719
Q T0535 262 VPYALKIET--SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 262 ~~~~f~i~~--~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
..++|.+.. +..+.|+|.|.+|++.|+++|++|
T Consensus 88 ~~~~f~i~~~~~r~~~~~A~s~ee~~~Wi~al~~a 122 (128)
T 2rlo_A 88 ENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQ 122 (128)
T ss_dssp CCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 67458998489968999939999999999999999
No 76
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=94.92 E-value=0.027 Score=30.59 Aligned_cols=73 Identities=14% Similarity=0.215 Sum_probs=42.2
Q ss_pred CCCCCEEEEEECC-EEEEEEEEC----CCEEEEE--E-------EEEECCCCCCCCCEEEEEE--CCEEEEEECCHHHHH
Q ss_conf 4542002565155-379998614----8727875--5-------6641225566760178870--838999818989999
Q T0535 222 GKNRRPRHLFLND-VLLYTYPQK----DGKYRLK--N-------TLAVSRPVEKVPYALKIET--SESCLLSASSCAERD 285 (294)
Q Consensus 222 ~~~~~~~~fLf~D-~li~~k~~~----~~~~~~~--~-------~i~l~~~~~~~~~~f~i~~--~~~~~l~a~s~~ek~ 285 (294)
.+....++|.+.+ .|.+.+... .+...+. . .+....+....++.|.+.. +..+.|+|.|.+|+.
T Consensus 29 ~k~W~kry~vL~~~~L~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~A~s~~d~~ 108 (122)
T 1dro_A 29 NRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMS 108 (122)
T ss_dssp CCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHH
T ss_pred CCCCEEEEEEEECCEEEEECCCCCCCCCCCCEECCCEEEECCCCEEEECCCCCCCCCEEEEECCCCCEEEEECCCHHHHH
T ss_conf 89860899999899999982722232268510045214752774698633356666338998699969999879999999
Q ss_pred HHHHHHHHC
Q ss_conf 999999719
Q T0535 286 EWYGCLSRA 294 (294)
Q Consensus 286 ~W~~~i~~A 294 (294)
.|+.+|+.|
T Consensus 109 ~Wv~ai~~~ 117 (122)
T 1dro_A 109 QWVTSLKAQ 117 (122)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 77
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=87.18 E-value=0.86 Score=21.39 Aligned_cols=35 Identities=23% Similarity=0.427 Sum_probs=29.3
Q ss_pred CCCCCCEEEEEEC---CEEEEEECCHHHHHHHHHHHHH
Q ss_conf 5667601788708---3899981898999999999971
Q T0535 259 VEKVPYALKIETS---ESCLLSASSCAERDEWYGCLSR 293 (294)
Q Consensus 259 ~~~~~~~f~i~~~---~~~~l~a~s~~ek~~W~~~i~~ 293 (294)
.+..+++|++.+. .+++|+|.+..+-..|+++|+-
T Consensus 137 ~D~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aIhs 174 (178)
T 2adz_A 137 TDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQA 174 (178)
T ss_dssp SCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHH
T ss_conf 99876668997479973579980987999999999987
No 78
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=83.52 E-value=1.5 Score=19.83 Aligned_cols=32 Identities=22% Similarity=0.189 Sum_probs=25.5
Q ss_pred CCCCEEEEEE---CCEEEEEECCHHHHHHHHHHHH
Q ss_conf 6760178870---8389998189899999999997
Q T0535 261 KVPYALKIET---SESCLLSASSCAERDEWYGCLS 292 (294)
Q Consensus 261 ~~~~~f~i~~---~~~~~l~a~s~~ek~~W~~~i~ 292 (294)
..+++|.|.. ..++-|.|.|.++++.|+..|.
T Consensus 83 ~~~~~Fsiv~~~~~rtLdL~a~~~~~~~~Wv~gL~ 117 (131)
T 1mai_A 83 PEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLR 117 (131)
T ss_dssp CGGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 84537999985898379999899999999999999
No 79
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=60.93 E-value=5.7 Score=16.39 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=43.4
Q ss_pred EEEECCCEEEEEEEEEECCCC-----CCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 986148727875566412255-----6676017887083899981898999999999971
Q T0535 239 TYPQKDGKYRLKNTLAVSRPV-----EKVPYALKIETSESCLLSASSCAERDEWYGCLSR 293 (294)
Q Consensus 239 ~k~~~~~~~~~~~~i~l~~~~-----~~~~~~f~i~~~~~~~l~a~s~~ek~~W~~~i~~ 293 (294)
++.+.+|.|.+...++|.+.. ...+..|.+.-++.|..+|.|..||...+..|.+
T Consensus 86 ~k~N~ngtfsiGKTW~L~ELk~Id~~~~~~~gF~Ltl~K~YyW~a~s~kEr~~Fi~sLvK 145 (171)
T 3hie_A 86 ARENSDGSFQIGRTWQLTELVRVEKDLEISEGFILTMSKKYYWETNSAKERTVFIKSLIT 145 (171)
T ss_dssp EEECTTSCEEEEEEEEGGGCCEEEECSSCTTEEEEESSSEEEEECSSHHHHHHHHHHHHH
T ss_pred EEECCCCCEEECCEECHHHHHHHHCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHH
T ss_conf 331689857735683278825443535899867999587479965877888999999999
No 80
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=54.64 E-value=7.2 Score=15.74 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=24.1
Q ss_pred CCEEEEEE----CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 60178870----838999818989999999999719
Q T0535 263 PYALKIET----SESCLLSASSCAERDEWYGCLSRA 294 (294)
Q Consensus 263 ~~~f~i~~----~~~~~l~a~s~~ek~~W~~~i~~A 294 (294)
++.|.|.+ ...+-+.|.|.||-..|+..|..|
T Consensus 111 ~~vf~i~~~~~~~~~levAa~s~Eel~eW~~~Irea 146 (150)
T 2fjl_A 111 LFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREV 146 (150)
T ss_dssp SCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 489997579888844676504299999999999999
No 81
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinase substrate; HGS, ESCRT, ubiquitin, MVB, cytoplasm, endosome, membrane, metal-binding, phosphoprotein; 2.30A {Homo sapiens}
Probab=38.02 E-value=13 Score=14.14 Aligned_cols=53 Identities=9% Similarity=0.165 Sum_probs=34.0
Q ss_pred HHHHHHH-HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999768-9999999998731024566789889988712888999998999999998
Q T0535 16 KAYVELQ-HLNLDFHGAVRALDDDHEDTLAREELRQGLSELPAIHDLHQGILEELEE 71 (294)
Q Consensus 16 ~~Yv~~l-~l~~~~~~~l~~~~~~~~~~l~~~~~~~lF~ni~~i~~~h~~~l~~L~~ 71 (294)
+.|++.+ .-++.|...++.-.....++.....+.+||.++... |..+++-++.
T Consensus 3 e~f~~~l~~qVeifvNRmkSnssRGRsi~nDs~VQtLF~~lt~m---H~qLL~~i~~ 56 (98)
T 3f1i_H 3 EQFLKALQNAVTTFVNRMKSNHMRGRSITNDSAVLSLFQSINGM---HPQLLELLNQ 56 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH---HHHHHHHHHH
T ss_conf 78999999999999999885000587775447899999999987---8999999999
No 82
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=24.02 E-value=23 Score=12.68 Aligned_cols=53 Identities=19% Similarity=0.325 Sum_probs=40.1
Q ss_pred EECCCEEEEEEEEEECCCC--C---CCCCEEEEEECCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 6148727875566412255--6---676017887083899981898999999999971
Q T0535 241 PQKDGKYRLKNTLAVSRPV--E---KVPYALKIETSESCLLSASSCAERDEWYGCLSR 293 (294)
Q Consensus 241 ~~~~~~~~~~~~i~l~~~~--~---~~~~~f~i~~~~~~~l~a~s~~ek~~W~~~i~~ 293 (294)
...++.|.+...|.|.+.. + .-+..|.+.-.+.|.-+|.+..||...+..|.+
T Consensus 158 eN~nGTFsIGKTW~LdELr~Ie~~~~~~~gF~lTl~K~YyW~a~s~kEr~~Fi~sLvK 215 (320)
T 3a58_A 158 ENSDGSFQIGRTWQLTELVRVEKDLEISEGFILTMSKKYYWETNSAKERTVFIKSLIT 215 (320)
T ss_dssp ECGGGCEEEEEEEEGGGCCEEEECSSCTTEEEEESSSEEEEEESSHHHHHHHHHHHHH
T ss_pred ECCCCCEECCCEEEHHHHHHHHCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHH
T ss_conf 0588876415551089988664335889866999488658846976898999999999
Done!