Query T0539 HR4710B, , 81 residues
Match_columns 81
No_of_seqs 127 out of 4952
Neff 7.3
Searched_HMMs 15564
Date Fri May 21 18:06:55 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0539.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0539.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iyma_ g.44.1.1 (A:) EL5 RING 99.7 2.8E-18 1.8E-22 109.3 3.1 52 27-78 2-54 (55)
2 d3dplr1 g.44.1.1 (R:19-106) RI 99.6 3E-16 1.9E-20 99.1 2.9 49 29-77 20-83 (88)
3 d1v87a_ g.44.1.1 (A:) Deltex p 99.6 4E-16 2.6E-20 98.5 2.9 67 5-77 6-92 (114)
4 d1chca_ g.44.1.1 (A:) Immediat 99.6 8.3E-16 5.3E-20 96.9 4.1 48 29-78 4-51 (68)
5 d1fbva4 g.44.1.1 (A:356-434) C 99.5 8.6E-15 5.5E-19 91.8 2.5 47 29-78 22-69 (79)
6 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.4 5.2E-15 3.3E-19 92.9 -0.1 51 26-79 17-70 (103)
7 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.4 1.7E-14 1.1E-18 90.4 1.9 50 29-78 2-54 (65)
8 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.4 1.1E-14 7E-19 91.3 0.6 49 31-79 1-51 (52)
9 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.3 6.8E-14 4.4E-18 87.3 1.0 47 29-78 22-69 (86)
10 d1bora_ g.44.1.1 (A:) Acute pr 99.3 2E-13 1.3E-17 85.0 2.4 47 28-80 4-50 (56)
11 d1bora_ g.44.1.1 (A:) Acute pr 99.3 3.6E-13 2.3E-17 83.7 2.4 47 28-80 4-50 (56)
12 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.2 9.2E-13 5.9E-17 81.7 1.6 47 28-78 20-66 (97)
13 d2baya1 g.44.1.2 (A:1-56) Pre- 99.2 1.2E-12 7.6E-17 81.1 1.5 46 31-78 1-46 (56)
14 d1vyxa_ g.44.1.3 (A:) IE1B pro 99.2 2.2E-12 1.4E-16 79.8 2.1 52 27-78 3-58 (60)
15 d2c2la2 g.44.1.2 (A:225-304) S 99.1 1.3E-11 8.3E-16 76.0 3.2 50 26-78 3-53 (80)
16 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.1 2E-11 1.3E-15 75.0 2.8 51 26-79 4-55 (78)
17 d1wgma_ g.44.1.2 (A:) Ubiquiti 98.9 3.3E-10 2.1E-14 68.9 2.3 51 25-78 17-68 (98)
18 d1wima_ g.44.1.1 (A:) UbcM4-in 98.7 1.4E-09 8.9E-14 65.8 0.8 48 28-75 3-58 (94)
19 d1we9a_ g.50.1.2 (A:) PHD fing 93.0 0.016 1E-06 30.6 1.1 53 27-79 3-61 (64)
20 d1mm2a_ g.50.1.2 (A:) Mi2-beta 91.6 0.042 2.7E-06 28.5 1.8 49 27-78 6-58 (61)
21 d1f62a_ g.50.1.2 (A:) Williams 90.9 0.026 1.7E-06 29.5 0.3 45 32-76 2-50 (51)
22 d1wila_ g.50.1.3 (A:) Hypothet 90.8 0.046 3E-06 28.3 1.4 38 25-63 10-47 (89)
23 d1wewa_ g.50.1.2 (A:) Sumoylat 90.1 0.026 1.7E-06 29.5 -0.3 48 30-79 16-75 (78)
24 d1fp0a1 g.50.1.2 (A:19-88) Nuc 90.0 0.084 5.4E-06 27.0 2.2 46 29-77 6-55 (70)
25 d1weva_ g.50.1.2 (A:) PHD fing 86.9 0.033 2.1E-06 29.0 -1.5 49 29-77 15-73 (88)
26 d1wepa_ g.50.1.2 (A:) PHD fing 85.9 0.45 2.9E-05 23.3 3.9 49 30-79 12-66 (79)
27 d1wema_ g.50.1.2 (A:) Death as 78.4 0.45 2.9E-05 23.3 1.5 50 29-79 15-73 (76)
28 d1wesa_ g.50.1.2 (A:) PHD Inhi 76.3 1 6.4E-05 21.6 2.8 43 31-77 17-66 (71)
29 d1weea_ g.50.1.2 (A:) PHD fing 73.0 0.45 2.9E-05 23.3 0.4 48 30-78 16-68 (72)
30 d1zbdb_ g.50.1.1 (B:) Effector 71.0 1.4 8.8E-05 20.9 2.5 50 26-75 44-99 (124)
31 d2jnea1 g.41.18.1 (A:1-71) Hyp 70.4 0.2 1.3E-05 25.0 -1.9 40 30-77 2-41 (71)
32 d1y02a2 g.50.1.1 (A:20-70) Rif 68.1 0.3 2E-05 24.2 -1.4 44 32-75 2-46 (51)
33 d1z60a1 g.49.1.2 (A:328-386) T 62.7 1.1 6.8E-05 21.5 0.5 45 29-73 14-58 (59)
34 d2cs3a1 g.44.1.3 (A:8-87) Prot 59.3 2.7 0.00017 19.5 2.1 38 29-67 7-46 (80)
35 d1dvpa2 g.50.1.1 (A:149-220) H 57.6 2.8 0.00018 19.3 2.0 35 30-64 13-48 (72)
36 d1wfka_ g.50.1.1 (A:) Zinc fin 56.3 4.1 0.00026 18.5 2.6 48 26-73 5-60 (88)
37 d1joca1 g.50.1.1 (A:1348-1411) 52.8 3.7 0.00024 18.8 1.9 37 29-65 7-44 (64)
38 d1weoa_ g.44.1.1 (A:) Cellulos 51.2 7.2 0.00046 17.3 3.2 49 29-77 15-68 (93)
39 d2o35a1 a.293.1.1 (A:2-80) Hyp 49.9 2.1 0.00013 20.0 0.3 14 53-66 38-51 (79)
40 d1vfya_ g.50.1.1 (A:) vps27p p 49.7 4.2 0.00027 18.5 1.8 34 31-64 6-40 (67)
41 d2pnxa1 g.50.1.2 (A:195-245) I 45.4 2 0.00013 20.0 -0.3 41 31-76 3-51 (51)
42 d1wd2a_ g.44.1.1 (A:) Ariadne- 37.6 5.6 0.00036 17.9 0.9 38 30-67 6-48 (60)
43 d1b8ta3 g.39.1.3 (A:101-143) C 37.5 8.9 0.00057 16.8 1.9 30 29-60 14-43 (43)
44 d1vfya_ g.50.1.1 (A:) vps27p p 36.9 8.8 0.00057 16.9 1.8 34 31-64 6-40 (67)
45 d2co8a2 g.39.1.3 (A:8-43) Nedd 36.5 11 0.00072 16.3 2.3 30 29-60 7-36 (36)
46 d2gmga1 a.4.5.82 (A:1-105) Hyp 32.2 5.7 0.00037 17.8 0.3 27 49-80 71-98 (105)
47 d2ct7a1 g.44.1.4 (A:8-80) Ring 30.4 8.6 0.00055 16.9 0.9 38 31-68 19-59 (73)
48 d2d8ya1 g.39.1.3 (A:9-43) Epli 27.6 18 0.0011 15.3 2.1 30 29-60 6-35 (35)
49 d2dloa1 g.39.1.3 (A:8-42) Thyr 26.1 16 0.001 15.6 1.7 29 29-60 7-35 (35)
50 d1a7ia1 g.39.1.3 (A:8-35) Cyst 25.9 15 0.00098 15.7 1.5 26 32-60 2-28 (28)
51 d2d8va1 g.43.1.1 (A:8-61) Zinc 20.7 22 0.0014 14.9 1.5 27 33-63 4-31 (54)
52 d1v6ga2 g.39.1.3 (A:42-81) Act 20.7 18 0.0012 15.3 1.1 17 32-48 2-18 (40)
53 d2cu8a1 g.39.1.3 (A:8-37) Cyst 20.5 24 0.0016 14.7 1.7 28 31-60 3-30 (30)
No 1
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.69 E-value=2.8e-18 Score=109.25 Aligned_cols=52 Identities=38% Similarity=0.857 Sum_probs=46.4
Q ss_pred CCCCCCCCEECCCCCCCCEEEEC-CCCCCCCCCCHHHHHHCCCCCCCCCCCCC
Q ss_conf 67776042134667789715650-03443377321689860899880267588
Q T0539 27 VGQEMCCPICCSEYVKGEVATEL-PCHHYFHKPCVSIWLQKSGTCPVCRCMFP 78 (81)
Q Consensus 27 ~~~~~~C~ICl~~~~~~~~~~~l-~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~~p 78 (81)
.+++.+|+||+++|..++.++.+ +|+|.||..||.+|++.+++||+||+++.
T Consensus 2 ~ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~i~ 54 (55)
T d1iyma_ 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCCCCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 88999984979001079889990898981059999999984993878897848
No 2
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=3e-16 Score=99.11 Aligned_cols=49 Identities=27% Similarity=0.531 Sum_probs=41.7
Q ss_pred CCCCCCEECCCCCCCC---------------EEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCC
Q ss_conf 7760421346677897---------------156500344337732168986089988026758
Q T0539 29 QEMCCPICCSEYVKGE---------------VATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 77 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~---------------~~~~l~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~~ 77 (81)
.+.+|+||++++.... .+..++|||.||.+||.+||+.+++||+||+++
T Consensus 20 ~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~ 83 (88)
T d3dplr1 20 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 83 (88)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBC
T ss_pred CCCCCEECCCHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9982878360241865432333321335568728726547465799999998799687889723
No 3
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=4e-16 Score=98.47 Aligned_cols=67 Identities=24% Similarity=0.487 Sum_probs=46.3
Q ss_pred CCCCHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCCCC---------------CEEEECCCCCCCCCCCHHHHHHCCC-
Q ss_conf 887969986379266126666667776042134667789---------------7156500344337732168986089-
Q T0539 5 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKG---------------EVATELPCHHYFHKPCVSIWLQKSG- 68 (81)
Q Consensus 5 PPas~~~i~~l~~~~~~~~~~~~~~~~~C~ICl~~~~~~---------------~~~~~l~C~H~Fh~~Ci~~Wl~~~~- 68 (81)
...++.+++++... . ....+.+|+||+++|... ..+..++|+|.||..||.+||+.++
T Consensus 6 s~~pe~v~~~~~e~-----~-~~~~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~ 79 (114)
T d1v87a_ 6 SGEPEQVIRKYTEE-----L-KVAPEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNK 79 (114)
T ss_dssp SCCHHHHHHHHEEE-----C-SSCCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHH-----H-CCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 89989999998898-----6-04656534530100013444335433345455434687999990569999999996675
Q ss_pred ----CCCCCCCCC
Q ss_conf ----988026758
Q T0539 69 ----TCPVCRCMF 77 (81)
Q Consensus 69 ----~CP~CR~~~ 77 (81)
+||+||..+
T Consensus 80 ~~~~~CP~CR~~~ 92 (114)
T d1v87a_ 80 DGSLQCPSCKTIY 92 (114)
T ss_dssp SSCCBCTTTCCBS
T ss_pred CCCCCCCCCCCHH
T ss_conf 7897665501220
No 4
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.56 E-value=8.3e-16 Score=96.89 Aligned_cols=48 Identities=31% Similarity=0.840 Sum_probs=41.9
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
Q ss_conf 77604213466778971565003443377321689860899880267588
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 78 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~~p 78 (81)
...+|+||++.+.+ .++.++|||.||..||.+|++.+++||+||+++-
T Consensus 4 ~~d~C~IC~~~~~~--~~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~ 51 (68)
T d1chca_ 4 VAERCPICLEDPSN--YSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCCSSCCSCCCS--CEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCCCCCCCCCCC--CCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 79999449939668--8388289991768999999982990888781637
No 5
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=8.6e-15 Score=91.83 Aligned_cols=47 Identities=28% Similarity=0.764 Sum_probs=39.6
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHC-CCCCCCCCCCCC
Q ss_conf 77604213466778971565003443377321689860-899880267588
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQK-SGTCPVCRCMFP 78 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~-~~~CP~CR~~~p 78 (81)
+...|+||++.+.+ .+.++|||.||..||.+|++. +++||+||+++-
T Consensus 22 ~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~ 69 (79)
T d1fbva4 22 TFQLCKICAENDKD---VKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIK 69 (79)
T ss_dssp CTTBCTTTSSSBCC---EECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCC
T ss_pred CCCCCCCCCCCCCC---EEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 98999358976899---6995899935299999999978581899795864
No 6
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=5.2e-15 Score=92.93 Aligned_cols=51 Identities=27% Similarity=0.615 Sum_probs=41.7
Q ss_pred CCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCC---CCCCCCCCCCC
Q ss_conf 6677760421346677897156500344337732168986089---98802675888
Q T0539 26 AVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSG---TCPVCRCMFPP 79 (81)
Q Consensus 26 ~~~~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~---~CP~CR~~~p~ 79 (81)
...+...|+||++.|.+. +.++|||.||..||.+|++.++ .||+||..+.+
T Consensus 17 ~l~~~l~CpIC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (103)
T d1jm7a_ 17 AMQKILECPICLELIKEP---VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (103)
T ss_dssp HHHHHTSCSSSCCCCSSC---CBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred HCCCCCCCCCCCCHHCCE---EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 663584997218231891---883799864167899999977999809698883875
No 7
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.7e-14 Score=90.36 Aligned_cols=50 Identities=22% Similarity=0.571 Sum_probs=40.5
Q ss_pred CCCCCCEECCCCCCC--CEEEECCCCCCCCCCCHHHHHHC-CCCCCCCCCCCC
Q ss_conf 776042134667789--71565003443377321689860-899880267588
Q T0539 29 QEMCCPICCSEYVKG--EVATELPCHHYFHKPCVSIWLQK-SGTCPVCRCMFP 78 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~--~~~~~l~C~H~Fh~~Ci~~Wl~~-~~~CP~CR~~~p 78 (81)
++.+|+||++++..+ ..+..++|||.||..||.+|++. +++||+||+.+.
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~ 54 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLR 54 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCS
T ss_pred CCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 98998708826003995679847637276488999985708197999986813
No 8
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.1e-14 Score=91.32 Aligned_cols=49 Identities=22% Similarity=0.557 Sum_probs=41.0
Q ss_pred CCCCEECCCCCCCCE-EEECCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCC
Q ss_conf 604213466778971-5650034433773216898608-998802675888
Q T0539 31 MCCPICCSEYVKGEV-ATELPCHHYFHKPCVSIWLQKS-GTCPVCRCMFPP 79 (81)
Q Consensus 31 ~~C~ICl~~~~~~~~-~~~l~C~H~Fh~~Ci~~Wl~~~-~~CP~CR~~~p~ 79 (81)
.+|+||+++|+.++. ++.++|||.||.+||.+|++.+ ++||+||+.+..
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 51 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCSC
T ss_pred CCCCCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999587823518982598669977045589999996648989865794889
No 9
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.34 E-value=6.8e-14 Score=87.33 Aligned_cols=47 Identities=28% Similarity=0.622 Sum_probs=39.6
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCC-CCCCCCCCCCC
Q ss_conf 776042134667789715650034433773216898608-99880267588
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS-GTCPVCRCMFP 78 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~-~~CP~CR~~~p 78 (81)
++..|+||++.+.+. +.++|||.||..||.+|++.+ .+||+||+.+.
T Consensus 22 ~~l~C~IC~~~~~~p---v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~ 69 (86)
T d1rmda2 22 KSISCQICEHILADP---VETSCKHLFCRICILRCLKVMGSYCPSCRYPCF 69 (86)
T ss_dssp HHTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCCCCCCHHCC---EECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 675995678444155---526788763199999999648790703699799
No 10
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=2e-13 Score=84.96 Aligned_cols=47 Identities=28% Similarity=0.552 Sum_probs=39.1
Q ss_pred CCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 77760421346677897156500344337732168986089988026758888
Q T0539 28 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPP 80 (81)
Q Consensus 28 ~~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~~p~p 80 (81)
.+..+|+||++.|.+. +.++|||.||..||.+| +.+||+||++++..
T Consensus 4 ~~~l~C~IC~~~~~~p---~~lpCgH~fC~~Ci~~~---~~~CP~Cr~~~~~~ 50 (56)
T d1bora_ 4 FQFLRCQQCQAEAKCP---KLLPCLHTLCSGCLEAS---GMQCPICQAPWPLG 50 (56)
T ss_dssp CCCSSCSSSCSSCBCC---SCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCC
T ss_pred CCCCCCCCCCCCCCCC---EEECCCCHHHHHHHHCC---CCCCCCCCCCCCCC
T ss_conf 6788984029415897---89017777859988729---79684979966699
No 11
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=3.6e-13 Score=83.70 Aligned_cols=47 Identities=28% Similarity=0.518 Sum_probs=39.8
Q ss_pred CCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 77760421346677897156500344337732168986089988026758888
Q T0539 28 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPP 80 (81)
Q Consensus 28 ~~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~~p~p 80 (81)
.+...|+||++.+.+. +.++|||.||..||.+|. .+||+||+.+|++
T Consensus 4 ~q~l~C~IC~~~~~~p---~~lpC~H~fC~~Ci~~~~---~~CP~Cr~~~~~~ 50 (56)
T d1bora_ 4 FQFLRCQQCQAEAKCP---KLLPCLHTLCSGCLEASG---MQCPICQAPWPLG 50 (56)
T ss_dssp CCCSSCSSSCSSCBCC---SCSTTSCCSBTTTCSSSS---SSCSSCCSSSSCC
T ss_pred CCCCCCCCCCCCCCCC---EECCCCCHHHHHHHHHHH---CCCCCCCCCCCCC
T ss_conf 4323262022114576---206677502178886421---2587576787899
No 12
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=9.2e-13 Score=81.70 Aligned_cols=47 Identities=26% Similarity=0.438 Sum_probs=38.4
Q ss_pred CCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
Q ss_conf 777604213466778971565003443377321689860899880267588
Q T0539 28 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 78 (81)
Q Consensus 28 ~~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~~p 78 (81)
.++..|+||++.|.+. +...+|||.||..||.+|+. +.||+||..+-
T Consensus 20 ~~~l~C~IC~~~~~~p--v~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~ 66 (97)
T d1jm7b_ 20 EKLLRCSRCTNILREP--VCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAW 66 (97)
T ss_dssp HHTTSCSSSCSCCSSC--BCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCS
T ss_pred HHCCCCCCCCCHHHCC--CEECCCCCCHHHHHHHHHHH--CCCCCCCCCCC
T ss_conf 1228992587221127--46588999302999999985--36662278676
No 13
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.22 E-value=1.2e-12 Score=81.14 Aligned_cols=46 Identities=15% Similarity=0.269 Sum_probs=39.8
Q ss_pred CCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
Q ss_conf 604213466778971565003443377321689860899880267588
Q T0539 31 MCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 78 (81)
Q Consensus 31 ~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~~p 78 (81)
..|+||++.+.+ .+....|||+||++||.+|++.+++||+||+.+-
T Consensus 1 l~C~Ic~~~~~~--Pv~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l~ 46 (56)
T d2baya1 1 MLCAISGKVPRR--PVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLS 46 (56)
T ss_dssp CCCTTTCSCCSS--EEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCC
T ss_pred CCCCCCCCHHHH--CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 999367856886--5745789984559999998760367985478188
No 14
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=99.19 E-value=2.2e-12 Score=79.76 Aligned_cols=52 Identities=21% Similarity=0.462 Sum_probs=38.5
Q ss_pred CCCCCCCCEECCCCCCCCEE--EECCCCCCCCCCCHHHHHHC--CCCCCCCCCCCC
Q ss_conf 67776042134667789715--65003443377321689860--899880267588
Q T0539 27 VGQEMCCPICCSEYVKGEVA--TELPCHHYFHKPCVSIWLQK--SGTCPVCRCMFP 78 (81)
Q Consensus 27 ~~~~~~C~ICl~~~~~~~~~--~~l~C~H~Fh~~Ci~~Wl~~--~~~CP~CR~~~p 78 (81)
.++...|.||++++++.... ....|+|.||..||.+|++. +.+||+||+++-
T Consensus 3 ded~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 3 DEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp TCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCEECHHHHHHHHHHCCCCCCCCCCCEEE
T ss_conf 88899992388627775167314589778873899999971078988916697124
No 15
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.12 E-value=1.3e-11 Score=75.96 Aligned_cols=50 Identities=16% Similarity=0.196 Sum_probs=42.0
Q ss_pred CCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCC-CCCCCCCCCCC
Q ss_conf 667776042134667789715650034433773216898608-99880267588
Q T0539 26 AVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS-GTCPVCRCMFP 78 (81)
Q Consensus 26 ~~~~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~-~~CP~CR~~~p 78 (81)
+..++..|+||++-|.+. +.++|||.|+..||.+|+..+ .+||+||+.+.
T Consensus 3 eiP~~l~CpIc~~l~~dP---v~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~ 53 (80)
T d2c2la2 3 DIPDYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFNPVTRSPLT 53 (80)
T ss_dssp CCCSTTBCTTTCSBCSSE---EECSSCCEEETTHHHHHHHHTCSSCTTTCCCCC
T ss_pred CCCCCCCCCCCCCHHHHH---CCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 897001185837323403---305886856388999998637765787566654
No 16
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.08 E-value=2e-11 Score=74.96 Aligned_cols=51 Identities=16% Similarity=0.356 Sum_probs=42.6
Q ss_pred CCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCC
Q ss_conf 667776042134667789715650034433773216898608-998802675888
Q T0539 26 AVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS-GTCPVCRCMFPP 79 (81)
Q Consensus 26 ~~~~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~-~~CP~CR~~~p~ 79 (81)
...++..|+||++.|.+. ++++|||.|++.||.+|++.+ .+||.||..+..
T Consensus 4 eiP~~l~CpIc~~~m~dP---V~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~ 55 (78)
T d1t1ha_ 4 EFPEYFRCPISLELMKDP---VIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp CCSSSSSCTTTSCCCSSE---EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred CCCCCCCCCCCCCHHHCC---EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 899627991718121083---3726777433999999999888878865563775
No 17
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=3.3e-10 Score=68.94 Aligned_cols=51 Identities=18% Similarity=0.194 Sum_probs=42.3
Q ss_pred CCCCCCCCCCEECCCCCCCCEEEECCCC-CCCCCCCHHHHHHCCCCCCCCCCCCC
Q ss_conf 6667776042134667789715650034-43377321689860899880267588
Q T0539 25 GAVGQEMCCPICCSEYVKGEVATELPCH-HYFHKPCVSIWLQKSGTCPVCRCMFP 78 (81)
Q Consensus 25 ~~~~~~~~C~ICl~~~~~~~~~~~l~C~-H~Fh~~Ci~~Wl~~~~~CP~CR~~~p 78 (81)
....++..|+||++-|.+. ++++|+ |.|++.||.+||+.+++||+||+.+.
T Consensus 17 ~~~P~~f~CPI~~~lm~dP---V~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~ 68 (98)
T d1wgma_ 17 ADACDEFLDPIMSTLMCDP---VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLT 68 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCC
T ss_pred CCCCHHHCCCCCHHHHHHH---HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 5990774886734688777---762355320149999999870687665556664
No 18
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=1.4e-09 Score=65.83 Aligned_cols=48 Identities=23% Similarity=0.580 Sum_probs=38.5
Q ss_pred CCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCC----C----CCCCCCC
Q ss_conf 7776042134667789715650034433773216898608----9----9880267
Q T0539 28 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS----G----TCPVCRC 75 (81)
Q Consensus 28 ~~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~----~----~CP~CR~ 75 (81)
....+|+||++++...+....++|+|.||.+||..|++.+ . .||.|+-
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C 58 (94)
T d1wima_ 3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAAC 58 (94)
T ss_dssp CSBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTC
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 98984931798360775577789999848817999999998517966558919998
No 19
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=92.99 E-value=0.016 Score=30.59 Aligned_cols=53 Identities=28% Similarity=0.518 Sum_probs=36.4
Q ss_pred CCCCCCCCEECCCCCCCCEEE-ECCCCCCCCCCCHHHHHH---C--CCCCCCCCCCCCC
Q ss_conf 677760421346677897156-500344337732168986---0--8998802675888
Q T0539 27 VGQEMCCPICCSEYVKGEVAT-ELPCHHYFHKPCVSIWLQ---K--SGTCPVCRCMFPP 79 (81)
Q Consensus 27 ~~~~~~C~ICl~~~~~~~~~~-~l~C~H~Fh~~Ci~~Wl~---~--~~~CP~CR~~~p~ 79 (81)
...+..|.||...+..++.++ --.|+..||..|+..-.. . .-.||.|+..-.|
T Consensus 3 ~~~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~~~p 61 (64)
T d1we9a_ 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSGP 61 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTCS
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCC
T ss_conf 88978184869977999878774899956980457858678888980899689380988
No 20
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.56 E-value=0.042 Score=28.49 Aligned_cols=49 Identities=24% Similarity=0.499 Sum_probs=33.2
Q ss_pred CCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCC----CCCCCCCCCC
Q ss_conf 677760421346677897156500344337732168986089----9880267588
Q T0539 27 VGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSG----TCPVCRCMFP 78 (81)
Q Consensus 27 ~~~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~----~CP~CR~~~p 78 (81)
...+..|.||.+ .++.+.--.|.-.||..|+...+.... .||.|+....
T Consensus 6 d~~~~~C~~C~~---~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~~ 58 (61)
T d1mm2a_ 6 DHHMEFCRVCKD---GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPAL 58 (61)
T ss_dssp CSSCSSCTTTCC---CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCC
T ss_pred CCCCCCCCCCCC---CCEEEEECCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCC
T ss_conf 688689867899---79588869999607611458885758997689978838456
No 21
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.94 E-value=0.026 Score=29.47 Aligned_cols=45 Identities=22% Similarity=0.482 Sum_probs=31.7
Q ss_pred CCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCC----CCCCCCCC
Q ss_conf 0421346677897156500344337732168986089----98802675
Q T0539 32 CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSG----TCPVCRCM 76 (81)
Q Consensus 32 ~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~----~CP~CR~~ 76 (81)
.|.||...-+.+..+.--.|...||..|+..-+.... .||.||..
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~~ 50 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
T ss_conf 9957689799988788589997897998899878589979899289090
No 22
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.76 E-value=0.046 Score=28.26 Aligned_cols=38 Identities=18% Similarity=0.455 Sum_probs=25.8
Q ss_pred CCCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHH
Q ss_conf 666777604213466778971565003443377321689
Q T0539 25 GAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIW 63 (81)
Q Consensus 25 ~~~~~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~W 63 (81)
..+..+..|.|| +-++..+..-.--|+.+||..|+++-
T Consensus 10 e~v~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 10 EPVVNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCCCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred CCCCCCCCCCCC-CCCCCCCEECCEEECCHHHHHHHHHH
T ss_conf 578867623656-74334540232133411247889885
No 23
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=90.07 E-value=0.026 Score=29.52 Aligned_cols=48 Identities=25% Similarity=0.580 Sum_probs=30.8
Q ss_pred CCCCCEECCCCCCCCEEEEC---CCCCCCCCCCHHH----H--HH---CCCCCCCCCCCCCC
Q ss_conf 76042134667789715650---0344337732168----9--86---08998802675888
Q T0539 30 EMCCPICCSEYVKGEVATEL---PCHHYFHKPCVSI----W--LQ---KSGTCPVCRCMFPP 79 (81)
Q Consensus 30 ~~~C~ICl~~~~~~~~~~~l---~C~H~Fh~~Ci~~----W--l~---~~~~CP~CR~~~p~ 79 (81)
...| ||......+..+ .. .|..-||..|+-- . .. ..-.||.|+..--|
T Consensus 16 ~~~C-~C~~~~~~~~~i-~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~~~p 75 (78)
T d1wewa_ 16 KVRC-VCGNSLETDSMI-QCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCC-SSCCCCCCSCEE-ECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CCEE-ECCCCCCCCCEE-EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 5483-899941788678-88689898679800117663242245689998989788485887
No 24
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.95 E-value=0.084 Score=26.96 Aligned_cols=46 Identities=24% Similarity=0.572 Sum_probs=31.8
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCC----CCCCCCCCC
Q ss_conf 7760421346677897156500344337732168986089----988026758
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSG----TCPVCRCMF 77 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~----~CP~CR~~~ 77 (81)
....|.||.. .++.+.--.|...||..|+...+.... .||.|+...
T Consensus 6 ~c~~C~~C~~---~~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 55 (70)
T d1fp0a1 6 SATICRVCQK---PGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 55 (70)
T ss_dssp SSSCCSSSCS---SSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCCCCCCC---CCEEEECCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCCC
T ss_conf 9799877799---6978889999915635148998684889898996794837
No 25
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.86 E-value=0.033 Score=28.97 Aligned_cols=49 Identities=20% Similarity=0.534 Sum_probs=30.7
Q ss_pred CCCCCCEECCCCCC-C-CEEEECCCCCCCCCCCHHHHH-----HC---CCCCCCCCCCC
Q ss_conf 77604213466778-9-715650034433773216898-----60---89988026758
Q T0539 29 QEMCCPICCSEYVK-G-EVATELPCHHYFHKPCVSIWL-----QK---SGTCPVCRCMF 77 (81)
Q Consensus 29 ~~~~C~ICl~~~~~-~-~~~~~l~C~H~Fh~~Ci~~Wl-----~~---~~~CP~CR~~~ 77 (81)
....|.||...... + ..+..-.|...||..|+...+ +. .=.||.|+...
T Consensus 15 ~~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~ 73 (88)
T d1weva_ 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHH
T ss_conf 85992578990678999688848999745611279855543345589838994457337
No 26
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.91 E-value=0.45 Score=23.30 Aligned_cols=49 Identities=29% Similarity=0.651 Sum_probs=31.4
Q ss_pred CCCCCEECCCCCCCCE-EEECCCCCCCCCCCHHH--HH-HC--CCCCCCCCCCCCC
Q ss_conf 7604213466778971-56500344337732168--98-60--8998802675888
Q T0539 30 EMCCPICCSEYVKGEV-ATELPCHHYFHKPCVSI--WL-QK--SGTCPVCRCMFPP 79 (81)
Q Consensus 30 ~~~C~ICl~~~~~~~~-~~~l~C~H~Fh~~Ci~~--Wl-~~--~~~CP~CR~~~p~ 79 (81)
..-| ||...++.++. +..-.|.--||..|+.- .. .. +-.||.||...-|
T Consensus 12 pv~C-iC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~gp 66 (79)
T d1wepa_ 12 PVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFGP 66 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSCS
T ss_pred CEEE-ECCCCCCCCCCEEECCCCCCCEECCCCCCCHHCCCCCCEEECCCCCCCCCC
T ss_conf 8684-898965999868889989973960341745102787877899567387687
No 27
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.42 E-value=0.45 Score=23.34 Aligned_cols=50 Identities=26% Similarity=0.581 Sum_probs=31.5
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCHH------HHHH---CCCCCCCCCCCCCC
Q ss_conf 776042134667789715650034433773216------8986---08998802675888
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCVS------IWLQ---KSGTCPVCRCMFPP 79 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~------~Wl~---~~~~CP~CR~~~p~ 79 (81)
+...| ||....+.+..+.--.|.--||..|+. ..+. ..-.||.|+...-|
T Consensus 15 ~~~~C-iC~~~~~~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~~~~p 73 (76)
T d1wema_ 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred CCCEE-ECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 95887-899925998188879999769951068870101114789981899798184877
No 28
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.28 E-value=1 Score=21.59 Aligned_cols=43 Identities=35% Similarity=0.658 Sum_probs=25.5
Q ss_pred CCCCEECCCCCCCCEEEEC--CCC-CCCCCCCHHHHHHCC----CCCCCCCCCC
Q ss_conf 6042134667789715650--034-433773216898608----9988026758
Q T0539 31 MCCPICCSEYVKGEVATEL--PCH-HYFHKPCVSIWLQKS----GTCPVCRCMF 77 (81)
Q Consensus 31 ~~C~ICl~~~~~~~~~~~l--~C~-H~Fh~~Ci~~Wl~~~----~~CP~CR~~~ 77 (81)
.-| ||..... ++.+... .|. .-||..|+- |... =.||.||.+-
T Consensus 17 ~~C-iC~~~~~-~~~i~c~~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~ 66 (71)
T d1wesa_ 17 TYC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGDS 66 (71)
T ss_dssp CCS-TTCCCCC-SSEECCSCTTCSCCCEETTTTT--CSSCCSSCCCCTTTSSCC
T ss_pred CEE-EECCCCC-CCEEEEECCCCCCCCCCCCCCC--CCCCCCCCEECCCCCCCC
T ss_conf 877-8289778-9877887889999685485478--984799858996886634
No 29
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=72.97 E-value=0.45 Score=23.31 Aligned_cols=48 Identities=21% Similarity=0.337 Sum_probs=30.6
Q ss_pred CCCCCEECCCCCCCCE-EEECCCCCCCCCCCHHHHHH----CCCCCCCCCCCCC
Q ss_conf 7604213466778971-56500344337732168986----0899880267588
Q T0539 30 EMCCPICCSEYVKGEV-ATELPCHHYFHKPCVSIWLQ----KSGTCPVCRCMFP 78 (81)
Q Consensus 30 ~~~C~ICl~~~~~~~~-~~~l~C~H~Fh~~Ci~~Wl~----~~~~CP~CR~~~p 78 (81)
...| ||....+.++. +.--.|..-||..|+..-.. ..-.||.|+..--
T Consensus 16 ~~~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~~~ 68 (72)
T d1weea_ 16 KVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSG 68 (72)
T ss_dssp EECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCS
T ss_pred EEEE-ECCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCC
T ss_conf 4770-6899848998698959999839551269762458997699928858188
No 30
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=71.00 E-value=1.4 Score=20.90 Aligned_cols=50 Identities=14% Similarity=0.189 Sum_probs=31.5
Q ss_pred CCCCCCCCCEECCCCCC--CCEEEECCCCCCCCCCCHHHHHHCC----CCCCCCCC
Q ss_conf 66777604213466778--9715650034433773216898608----99880267
Q T0539 26 AVGQEMCCPICCSEYVK--GEVATELPCHHYFHKPCVSIWLQKS----GTCPVCRC 75 (81)
Q Consensus 26 ~~~~~~~C~ICl~~~~~--~~~~~~l~C~H~Fh~~Ci~~Wl~~~----~~CP~CR~ 75 (81)
...+...|.+|...|.. ........||+.||..|-..-.... -.|-+|..
T Consensus 44 ~~~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~~~~~~~~~~~~w~C~~C~k 99 (124)
T d1zbdb_ 44 AGDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLE 99 (124)
T ss_dssp CSCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
T ss_conf 13679858345973347899988672478601158877756899997989806752
No 31
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=70.37 E-value=0.2 Score=25.04 Aligned_cols=40 Identities=23% Similarity=0.538 Sum_probs=26.9
Q ss_pred CCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCC
Q ss_conf 760421346677897156500344337732168986089988026758
Q T0539 30 EMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 77 (81)
Q Consensus 30 ~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~~ 77 (81)
+..||.|..+++.. =+|.+|..|-.. ++....||-|.++|
T Consensus 2 ~~~CP~C~~eL~~~-------~~~~~C~~C~~~-~~~~a~CPdC~~~L 41 (71)
T d2jnea1 2 ELHCPQCQHVLDQD-------NGHARCRSCGEF-IEMKALCPDCHQPL 41 (71)
T ss_dssp CCBCSSSCSBEEEE-------TTEEEETTTCCE-EEEEEECTTTCSBC
T ss_pred CCCCCCCCCCCCCC-------CCCEEHHHHHHH-HEEEEECCCCCCHH
T ss_conf 78688755731025-------897761464010-23677588602089
No 32
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.07 E-value=0.3 Score=24.16 Aligned_cols=44 Identities=23% Similarity=0.491 Sum_probs=31.1
Q ss_pred CCCEECCCCCCCCE-EEECCCCCCCCCCCHHHHHHCCCCCCCCCC
Q ss_conf 04213466778971-565003443377321689860899880267
Q T0539 32 CCPICCSEYVKGEV-ATELPCHHYFHKPCVSIWLQKSGTCPVCRC 75 (81)
Q Consensus 32 ~C~ICl~~~~~~~~-~~~l~C~H~Fh~~Ci~~Wl~~~~~CP~CR~ 75 (81)
.|.+|...|..... -.--.||.+|+..|.....+....|..|.+
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~~RvC~~C~~ 46 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 46 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHH
T ss_conf 761428800697647446669865172204789998839985764
No 33
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.74 E-value=1.1 Score=21.47 Aligned_cols=45 Identities=24% Similarity=0.423 Sum_probs=30.6
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 776042134667789715650034433773216898608998802
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVC 73 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci~~Wl~~~~~CP~C 73 (81)
....|.=|...+.+...-....|++.||.+|=.=.-+.-.+||-|
T Consensus 14 ~~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD~fiHe~lh~CpgC 58 (59)
T d1z60a1 14 GERFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp SCCEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCC
T ss_conf 998725878807998607996789851363444454330279887
No 34
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.30 E-value=2.7 Score=19.46 Aligned_cols=38 Identities=24% Similarity=0.548 Sum_probs=29.2
Q ss_pred CCCCCCEECCCCCCCCEEEECC--CCCCCCCCCHHHHHHCC
Q ss_conf 7760421346677897156500--34433773216898608
Q T0539 29 QEMCCPICCSEYVKGEVATELP--CHHYFHKPCVSIWLQKS 67 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~--C~H~Fh~~Ci~~Wl~~~ 67 (81)
....|.+|.|.+++..-+. .| =+|.||..|-+..++.+
T Consensus 7 ~~l~CtlC~erLEdtHFVQ-CPsv~~HkFCFpCsr~sik~q 46 (80)
T d2cs3a1 7 GPLCCTICHERLEDTHFVQ-CPSVPSHKFCFPCSRESIKAQ 46 (80)
T ss_dssp CSCCCSSSCSCCSSTTSEE-CSSCSSCEECHHHHHHHHHHH
T ss_pred CCEEEEEEHHHHCCCCEEE-CCCCCCCCEECCCCHHHHHHC
T ss_conf 8623421154623773675-788767712623468999832
No 35
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=57.61 E-value=2.8 Score=19.34 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=25.6
Q ss_pred CCCCCEECCCCCCCCE-EEECCCCCCCCCCCHHHHH
Q ss_conf 7604213466778971-5650034433773216898
Q T0539 30 EMCCPICCSEYVKGEV-ATELPCHHYFHKPCVSIWL 64 (81)
Q Consensus 30 ~~~C~ICl~~~~~~~~-~~~l~C~H~Fh~~Ci~~Wl 64 (81)
+..|.+|...|..-.. -.--.||++||..|....+
T Consensus 13 ~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~~~ 48 (72)
T d1dvpa2 13 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQC 48 (72)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCCE
T ss_conf 874346899005754442442168964914629916
No 36
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=56.35 E-value=4.1 Score=18.53 Aligned_cols=48 Identities=21% Similarity=0.383 Sum_probs=32.5
Q ss_pred CCCCCCCCCEECCCCCCCCEE-EECCCCCCCCCCCHHHHHHC--C-----CCCCCC
Q ss_conf 667776042134667789715-65003443377321689860--8-----998802
Q T0539 26 AVGQEMCCPICCSEYVKGEVA-TELPCHHYFHKPCVSIWLQK--S-----GTCPVC 73 (81)
Q Consensus 26 ~~~~~~~C~ICl~~~~~~~~~-~~l~C~H~Fh~~Ci~~Wl~~--~-----~~CP~C 73 (81)
....+..|.+|...|..-..- ..-.||-+||..|...++.. . ..|-.|
T Consensus 5 ~~~~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~RVC~~C 60 (88)
T d1wfka_ 5 SSGMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQC 60 (88)
T ss_dssp CCCCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHH
T ss_pred CCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCCCCCEECHHH
T ss_conf 77566869351950135433533411195458687389460687789878388899
No 37
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.82 E-value=3.7 Score=18.75 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=26.2
Q ss_pred CCCCCCEECCCCCCCCEE-EECCCCCCCCCCCHHHHHH
Q ss_conf 776042134667789715-6500344337732168986
Q T0539 29 QEMCCPICCSEYVKGEVA-TELPCHHYFHKPCVSIWLQ 65 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~-~~l~C~H~Fh~~Ci~~Wl~ 65 (81)
+...|.+|-..|..-..- .--.||++||..|....+.
T Consensus 7 ~~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~~~~ 44 (64)
T d1joca1 7 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNAL 44 (64)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCEECCCCCCCCEE
T ss_conf 68968375974368765505054198415420478363
No 38
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=51.20 E-value=7.2 Score=17.31 Aligned_cols=49 Identities=20% Similarity=0.542 Sum_probs=33.9
Q ss_pred CCCCCCEECCCCCC---CCEEEE-CCCCCCCCCCCHHHHHHC-CCCCCCCCCCC
Q ss_conf 77604213466778---971565-003443377321689860-89988026758
Q T0539 29 QEMCCPICCSEYVK---GEVATE-LPCHHYFHKPCVSIWLQK-SGTCPVCRCMF 77 (81)
Q Consensus 29 ~~~~C~ICl~~~~~---~~~~~~-l~C~H~Fh~~Ci~~Wl~~-~~~CP~CR~~~ 77 (81)
....|-||-+++.. ++..+. -.|+--.|..|..-=++. +..||.|+...
T Consensus 15 ~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Y 68 (93)
T d1weoa_ 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRY 68 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCC
T ss_pred CCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 552201154632417899888875236986450789999851670274448724
No 39
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=49.87 E-value=2.1 Score=20.01 Aligned_cols=14 Identities=29% Similarity=0.769 Sum_probs=11.5
Q ss_pred CCCCCCCHHHHHHC
Q ss_conf 43377321689860
Q T0539 53 HYFHKPCVSIWLQK 66 (81)
Q Consensus 53 H~Fh~~Ci~~Wl~~ 66 (81)
-.||..||.+|...
T Consensus 38 aGFCRNCLskWy~~ 51 (79)
T d2o35a1 38 AGFCRNCLSNWYRE 51 (79)
T ss_dssp HSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 40
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=49.74 E-value=4.2 Score=18.47 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=24.7
Q ss_pred CCCCEECCCCCCCCEE-EECCCCCCCCCCCHHHHH
Q ss_conf 6042134667789715-650034433773216898
Q T0539 31 MCCPICCSEYVKGEVA-TELPCHHYFHKPCVSIWL 64 (81)
Q Consensus 31 ~~C~ICl~~~~~~~~~-~~l~C~H~Fh~~Ci~~Wl 64 (81)
..|.+|...|..-..- .--.||.+||..|...++
T Consensus 6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~ 40 (67)
T d1vfya_ 6 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSI 40 (67)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCE
T ss_conf 00115897126864224145579776466217927
No 41
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=45.36 E-value=2 Score=20.04 Aligned_cols=41 Identities=32% Similarity=0.724 Sum_probs=23.4
Q ss_pred CCCCEECCCCCCCCEEEECC---CC-CCCCCCCHHHHHHCCC----CCCCCCCC
Q ss_conf 60421346677897156500---34-4337732168986089----98802675
Q T0539 31 MCCPICCSEYVKGEVATELP---CH-HYFHKPCVSIWLQKSG----TCPVCRCM 76 (81)
Q Consensus 31 ~~C~ICl~~~~~~~~~~~l~---C~-H~Fh~~Ci~~Wl~~~~----~CP~CR~~ 76 (81)
.-| ||.... +++ .+... |- --||..|+. |.... .||.|+++
T Consensus 3 ~yC-~C~~~~-~~~-mi~Cd~~~C~~~WfH~~Cvg--l~~~p~~~w~C~~C~~k 51 (51)
T d2pnxa1 3 TYC-LCHQVS-YGE-MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 51 (51)
T ss_dssp EET-TTTEEC-CSE-EEECSCTTCSSCEEEGGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CEE-ECCCCC-CCC-EEEEECCCCCCCCEECCCCC--CCCCCCCCEECCCCCCC
T ss_conf 378-817978-898-98885679998779287648--88479986999377796
No 42
>d1wd2a_ g.44.1.1 (A:) Ariadne-1 protein homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.64 E-value=5.6 Score=17.86 Aligned_cols=38 Identities=21% Similarity=0.395 Sum_probs=27.3
Q ss_pred CCCCCEECCCCCCCCEE---EEC--CCCCCCCCCCHHHHHHCC
Q ss_conf 76042134667789715---650--034433773216898608
Q T0539 30 EMCCPICCSEYVKGEVA---TEL--PCHHYFHKPCVSIWLQKS 67 (81)
Q Consensus 30 ~~~C~ICl~~~~~~~~~---~~l--~C~H~Fh~~Ci~~Wl~~~ 67 (81)
...||-|...++..+.- .-. .|++.|+..|...|-..+
T Consensus 6 tK~CP~C~~~ieK~~GCnhM~C~~~~C~~~fCw~C~~~~~~~~ 48 (60)
T d1wd2a_ 6 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHG 48 (60)
T ss_dssp CCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGGGG
T ss_pred CCCCCCCCCEEEECCCCCCEEECCCCCCCEEECCCCCCCCCCC
T ss_conf 8598799996887889887696998999938778798035578
No 43
>d1b8ta3 g.39.1.3 (A:101-143) Cysteine-rich (intestinal) protein, CRP, CRIP {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=37.51 E-value=8.9 Score=16.84 Aligned_cols=30 Identities=23% Similarity=0.464 Sum_probs=22.9
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCH
Q ss_conf 77604213466778971565003443377321
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCV 60 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci 60 (81)
....|+.|--.+...+.+.. =|+.||..|+
T Consensus 14 ~~~kC~~C~k~VY~~E~~~~--~g~~~Hk~CF 43 (43)
T d1b8ta3 14 GSDGCPRCGQAVYAAEKVIG--AGKSWHKSCF 43 (43)
T ss_dssp CCEECTTTSCEECSSSCEEE--TTEEECTTTC
T ss_pred CCCCCCCCCCEEEHHHHHHC--CCCCCCCCCC
T ss_conf 89867567999668898662--8971054879
No 44
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} SCOP: d1dvpa2 d1hyja_ d1joca1
Probab=36.86 E-value=8.8 Score=16.87 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=23.9
Q ss_pred CCCCEECCCCCCCCE-EEECCCCCCCCCCCHHHHH
Q ss_conf 604213466778971-5650034433773216898
Q T0539 31 MCCPICCSEYVKGEV-ATELPCHHYFHKPCVSIWL 64 (81)
Q Consensus 31 ~~C~ICl~~~~~~~~-~~~l~C~H~Fh~~Ci~~Wl 64 (81)
..|.+|-..|..... -.--.||.+||..|....+
T Consensus 6 ~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~~~ 40 (67)
T d1vfya_ 6 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSI 40 (67)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEE
T ss_conf 65666887355321220000132210012588404
No 45
>d2co8a2 g.39.1.3 (A:8-43) Nedd9 interacting protein with calponin homology, NICAL (MICAL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.50 E-value=11 Score=16.34 Aligned_cols=30 Identities=23% Similarity=0.509 Sum_probs=21.8
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCH
Q ss_conf 77604213466778971565003443377321
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCV 60 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci 60 (81)
....|.+|-..+..-+.+. -=|+.||..|+
T Consensus 7 ~~~~C~~C~K~VY~~Erl~--a~g~~yHk~CF 36 (36)
T d2co8a2 7 AGDLCALCGEHLYVLERLC--VNGHFFHRSCF 36 (36)
T ss_dssp SSCBCSSSCCBCCTTTBCC--BTTBCCBTTTC
T ss_pred CCCCCCCCCCEEEEEEEEE--ECCCEECCCCC
T ss_conf 8873515699986644887--26817000509
No 46
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=32.23 E-value=5.7 Score=17.79 Aligned_cols=27 Identities=22% Similarity=0.657 Sum_probs=17.4
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCCCCCCC-CCC
Q ss_conf 00344337732168986089988026758-888
Q T0539 49 LPCHHYFHKPCVSIWLQKSGTCPVCRCMF-PPP 80 (81)
Q Consensus 49 l~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~~-p~p 80 (81)
..||=.|- + + ++.=+.||.||.++ -+|
T Consensus 71 rkCGfvFr-~---~-~kkPSRCP~CKSE~Ie~P 98 (105)
T d2gmga1 71 RKCGFVFK-A---E-INIPSRCPKCKSEWIEEP 98 (105)
T ss_dssp TTTCCBCC-C---C-SSCCSSCSSSCCCCBCCC
T ss_pred HHCCCEEC-C---C-CCCCCCCCCCCCCCCCCC
T ss_conf 23677605-6---6-899998998887263598
No 47
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.39 E-value=8.6 Score=16.92 Aligned_cols=38 Identities=24% Similarity=0.647 Sum_probs=24.4
Q ss_pred CCCCEECCCCC--CCCE-EEECCCCCCCCCCCHHHHHHCCC
Q ss_conf 60421346677--8971-56500344337732168986089
Q T0539 31 MCCPICCSEYV--KGEV-ATELPCHHYFHKPCVSIWLQKSG 68 (81)
Q Consensus 31 ~~C~ICl~~~~--~~~~-~~~l~C~H~Fh~~Ci~~Wl~~~~ 68 (81)
.-||=|-..+. .+.. ++...|++.||..|-..|-..+.
T Consensus 19 k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w~~~H~ 59 (73)
T d2ct7a1 19 LWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHR 59 (73)
T ss_dssp ECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCTTTT
T ss_pred CCCCCCCCEEEECCCCCEEECCCCCCEECCCCCCCHHCCCC
T ss_conf 89999999768779999878699899177061960124799
No 48
>d2d8ya1 g.39.1.3 (A:9-43) Eplin, LIMA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.60 E-value=18 Score=15.34 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=21.8
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCH
Q ss_conf 77604213466778971565003443377321
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCV 60 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci 60 (81)
....|..|.-....-+.+.. =|+.||..|.
T Consensus 6 ~~~kC~~C~K~VY~~E~~~a--~g~~~Hk~CF 35 (35)
T d2d8ya1 6 ARETCVECQKTVYPMERLLA--NQQVFHISCF 35 (35)
T ss_dssp SSCBCTTTCCBCCTTSEEEC--SSSEEETTTC
T ss_pred CCCCCCCCCCEEEEEEEEEC--CCEEHHHCCC
T ss_conf 87622137999862116763--8836101409
No 49
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.13 E-value=16 Score=15.57 Aligned_cols=29 Identities=14% Similarity=0.393 Sum_probs=20.8
Q ss_pred CCCCCCEECCCCCCCCEEEECCCCCCCCCCCH
Q ss_conf 77604213466778971565003443377321
Q T0539 29 QEMCCPICCSEYVKGEVATELPCHHYFHKPCV 60 (81)
Q Consensus 29 ~~~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci 60 (81)
.-..|.+|.+.+.+. .++ -.|..||-.|+
T Consensus 7 tlEkC~~C~~~I~dr-iLr--A~Gk~yHP~CF 35 (35)
T d2dloa1 7 TLEKCATCSQPILDR-ILR--AMGKAYHPGCF 35 (35)
T ss_dssp SCCBCTTTCCBCCSC-CEE--ETTEEECTTTC
T ss_pred HHHHHHHHCHHHHHH-HHH--HHCCCCCCCCC
T ss_conf 999999836599999-999--94788898879
No 50
>d1a7ia1 g.39.1.3 (A:8-35) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=25.89 E-value=15 Score=15.66 Aligned_cols=26 Identities=27% Similarity=0.631 Sum_probs=19.1
Q ss_pred CCCEECCCCCCCCEEEECCC-CCCCCCCCH
Q ss_conf 04213466778971565003-443377321
Q T0539 32 CCPICCSEYVKGEVATELPC-HHYFHKPCV 60 (81)
Q Consensus 32 ~C~ICl~~~~~~~~~~~l~C-~H~Fh~~Ci 60 (81)
.|.-|.......+++. | |..||..|+
T Consensus 2 kcg~c~ktvy~aeevq---c~grsfhk~cf 28 (28)
T d1a7ia1 2 KCGACGRTVYHAEEVQ---CDGRSFHRCCF 28 (28)
T ss_dssp BCSSSCCBCSSTTEEE---ETTEEEESSSE
T ss_pred CCCCCCCEEEEEEEEE---ECCCEECCCCC
T ss_conf 4554554576620054---16811021449
No 51
>d2d8va1 g.43.1.1 (A:8-61) Zinc finger FYVE domain-containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.74 E-value=22 Score=14.91 Aligned_cols=27 Identities=19% Similarity=0.429 Sum_probs=18.9
Q ss_pred CCEECCCCCCCCEEEECCCC-CCCCCCCHHHH
Q ss_conf 42134667789715650034-43377321689
Q T0539 33 CPICCSEYVKGEVATELPCH-HYFHKPCVSIW 63 (81)
Q Consensus 33 C~ICl~~~~~~~~~~~l~C~-H~Fh~~Ci~~W 63 (81)
|.||.+ ...++.+.|. -.||..|.++-
T Consensus 4 C~ICne----DA~lrC~gCdgdLyC~rC~rE~ 31 (54)
T d2d8va1 4 CCICNE----DATLRCAGCDGDLYCARCFREG 31 (54)
T ss_dssp CTTTCS----CCCEEETTTTSEEECSSHHHHH
T ss_pred EEEECC----CCCEEECCCCCCEEHHHHHHHH
T ss_conf 378669----8716846999755407888886
No 52
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.66 E-value=18 Score=15.28 Aligned_cols=17 Identities=24% Similarity=0.595 Sum_probs=13.4
Q ss_pred CCCEECCCCCCCCEEEE
Q ss_conf 04213466778971565
Q T0539 32 CCPICCSEYVKGEVATE 48 (81)
Q Consensus 32 ~C~ICl~~~~~~~~~~~ 48 (81)
.|++|...|-.|+.+.-
T Consensus 2 vC~vCr~pFP~GDRVTF 18 (40)
T d1v6ga2 2 VCAVCRLPFPPGDRVTF 18 (40)
T ss_dssp SCSSSCCCCCSSSCEEE
T ss_pred CCCCCCCCCCCCCEEEE
T ss_conf 22201787799886777
No 53
>d2cu8a1 g.39.1.3 (A:8-37) Cysteine-rich (intestinal) protein, CRP, CRIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.48 E-value=24 Score=14.68 Aligned_cols=28 Identities=29% Similarity=0.507 Sum_probs=21.0
Q ss_pred CCCCEECCCCCCCCEEEECCCCCCCCCCCH
Q ss_conf 604213466778971565003443377321
Q T0539 31 MCCPICCSEYVKGEVATELPCHHYFHKPCV 60 (81)
Q Consensus 31 ~~C~ICl~~~~~~~~~~~l~C~H~Fh~~Ci 60 (81)
..|+-|--.....+++..+ |-.+|..|+
T Consensus 3 ~~CprC~K~VYfaEk~~~l--gk~WHk~Cl 30 (30)
T d2cu8a1 3 SKCPKCDKTVYFAEKVSSL--GKDWHKFCL 30 (30)
T ss_dssp CBCTTTCCBCCTTTEEEET--TEEEETTTC
T ss_pred CCCCCCCCCEEEHHHHCCC--CCCCCCCCC
T ss_conf 7577888815437763057--854242629
Done!