Query         T0541 MvR254A, , 106 residues
Match_columns 106
No_of_seqs    115 out of 562
Neff          8.1 
Searched_HMMs 15564
Date          Fri May 21 18:04:23 2010
Command       /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0541.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0541.hhr 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1w8oa1 b.1.18.2 (A:403-505) S  98.5   1E-06 6.5E-11   52.3  10.7   79   14-92     12-92  (103)
  2 d1ex0a3 b.1.5.1 (A:628-727) Tr  97.1  0.0031   2E-07   34.1   9.6   85    2-89      2-87  (100)
  3 d1g0da3 b.1.5.1 (A:584-684) Tr  96.8  0.0089 5.7E-07   31.7  10.0   83    3-88      2-86  (101)
  4 d2q3za3 b.1.5.1 (A:586-683) Tr  96.7   0.014 9.1E-07   30.6  11.8   83    3-88      2-87  (98)
  5 d1vjja3 b.1.5.1 (A:594-692) Tr  96.6   0.016   1E-06   30.4  10.7   83    3-88      1-85  (99)
  6 d1zxqa1 b.1.1.3 (A:87-192) Int  94.9   0.094   6E-06   26.3   9.5   83    3-87      2-87  (106)
  7 d2vzsa2 b.1.4.1 (A:778-899) Ex  93.9    0.17 1.1E-05   25.0   8.4   70   18-89     37-114 (122)
  8 d2ccwa1 b.6.1.1 (A:1-129) Azur  87.9    0.38 2.5E-05   23.1   4.4   64   16-81     24-111 (129)
  9 d1xo8a_ b.1.25.1 (A:) Putative  87.9    0.73 4.7E-05   21.7   6.8   68    3-70     22-95  (151)
 10 d1xo8a_ b.1.25.1 (A:) Putative  87.2    0.81 5.2E-05   21.5   6.8   68    3-70     22-95  (151)
 11 d1vjja2 b.1.5.1 (A:479-593) Tr  86.0    0.94   6E-05   21.1   9.2   68    3-71      2-78  (115)
 12 d3es6b1 b.1.18.23 (B:1-118) Pr  83.4     1.2   8E-05   20.5   7.7   71   11-85     14-87  (118)
 13 d1cuoa_ b.6.1.1 (A:) Azurin {M  82.2     1.4   9E-05   20.2   6.5   61   21-81     27-111 (129)
 14 d1jz8a2 b.1.4.1 (A:626-730) be  79.0     1.8 0.00012   19.6   8.2   61   24-84     10-75  (105)
 15 d1iama1 b.1.1.3 (A:83-185) Int  75.8     2.3 0.00015   19.1  10.8   82    2-87      3-84  (103)
 16 d1exha_ b.2.2.1 (A:) Exo-1,4-b  73.5     2.6 0.00017   18.8   7.3   54   18-71     18-90  (110)
 17 d1jv2a2 b.1.15.1 (A:599-737) T  73.2     2.7 0.00017   18.7  11.4   87    2-89      5-124 (139)
 18 d1yq2a1 b.1.4.1 (A:610-721) be  71.3       3 0.00019   18.5   8.8   62   23-84     14-84  (112)
 19 d1exha_ b.2.2.1 (A:) Exo-1,4-b  71.3       3 0.00019   18.5   7.0   53   18-70     18-89  (110)
 20 d1ex0a2 b.1.5.1 (A:516-627) Tr  70.4     3.1  0.0002   18.4   7.2   58   13-71     10-76  (112)
 21 d1g0da2 b.1.5.1 (A:472-583) Tr  66.5     3.8 0.00024   17.9   6.8   61   10-71      6-75  (112)
 22 d1d3ii_ i.6.1.1 (I:) HRV14 com  59.2     5.3 0.00034   17.2   8.0   72   12-87     95-166 (185)
 23 d2ag4a1 b.95.1.1 (A:2-164) Gan  54.4     6.4 0.00041   16.7   8.3   85    5-89     16-149 (163)
 24 d1jzga_ b.6.1.1 (A:) Azurin {P  46.8     8.6 0.00055   16.1   4.1   28   54-81     84-111 (128)
 25 d1df0a2 b.14.1.1 (A:356-514) C  46.1     8.8 0.00056   16.0   3.2   39   56-95    121-159 (159)
 26 d1e30a_ b.6.1.1 (A:) Rusticyan  44.3     9.4  0.0006   15.9   6.8   63   20-84     67-138 (153)
 27 d2q3za2 b.1.5.1 (A:472-585) Tr  43.8     9.6 0.00062   15.8   7.4   59   12-71      9-77  (114)
 28 d1nwpa_ b.6.1.1 (A:) Azurin {P  43.4     9.7 0.00062   15.8   4.1   29   53-81     83-111 (128)
 29 d1kful2 b.14.1.1 (L:356-514) C  42.8     9.9 0.00064   15.7   4.3   39   56-95    121-159 (159)
 30 d1ex0a2 b.1.5.1 (A:516-627) Tr  41.1      11 0.00068   15.6   7.7   58   13-71     15-81  (117)
 31 d1x44a1 b.1.1.4 (A:8-97) Myosi  39.7      11 0.00072   15.5   3.6   66   11-82      8-76  (90)
 32 d1cwva1 b.1.14.1 (A:503-596) I  36.3      13 0.00082   15.2   7.1   67   16-86     15-82  (94)
 33 d1oe2a1 b.6.1.3 (A:1-159) Nitr  36.3      13 0.00082   15.2   3.6   24   54-80    105-128 (159)
 34 d2ag4a1 b.95.1.1 (A:2-164) Gan  36.0      13 0.00083   15.1   8.4   85    5-89     16-149 (163)
 35 d1nepa_ b.1.18.7 (A:) Epididym  34.9      13 0.00087   15.1  10.8   78   12-89     27-117 (130)
 36 d2bw4a1 b.6.1.3 (A:8-164) Nitr  33.1      14 0.00093   14.9   3.6   25   54-81    104-128 (157)
 37 d1sdda1 b.6.1.3 (A:1-180) Coag  32.9     9.3 0.00059   15.9   1.4   46   22-70     69-127 (180)
 38 d1qbaa2 b.2.2.3 (A:28-200) Bac  28.8      17  0.0011   14.5   7.5   52   19-70     38-110 (173)
 39 d1vcaa1 b.1.1.3 (A:91-199) Vas  26.1      19  0.0012   14.2  10.0   71   12-84     10-85  (109)
 40 d1f2qa2 b.1.1.4 (A:86-174) IgE  25.6      20  0.0013   14.2   6.1   71    4-85      1-71  (89)
 41 d1nbca_ b.2.2.2 (A:) Cellusoma  24.4      21  0.0014   14.0   7.5   41    4-44      1-43  (155)
 42 d2q9oa2 b.6.1.3 (A:163-343) La  23.8      22  0.0014   14.0   6.5   69   15-89     57-135 (181)
 43 d1z52a2 f.8.1.1 (A:85-469) (Pr  23.3      22  0.0014   13.9   5.2   81   21-103   114-194 (385)
 44 d1edqa1 b.1.18.2 (A:24-132) Ch  22.8      23  0.0015   13.9   6.7   40   38-84     52-91  (109)
 45 d1cwva1 b.1.14.1 (A:503-596) I  22.6      23  0.0015   13.9   8.5   69   15-86     14-82  (94)
 46 d1cs6a2 b.1.1.4 (A:104-208) Ax  22.5     9.9 0.00064   15.7   0.1   79    1-83      2-81  (105)
 47 d1qxpa3 b.14.1.1 (A:356-514) C  22.2      23  0.0015   13.8   2.9   38   56-94    122-159 (159)
 48 d1fwxa1 b.6.1.4 (A:452-581) Ni  21.2      25  0.0016   13.7   5.4   56   15-81     56-111 (132)
 49 d1g0da1 b.1.18.9 (A:6-140) Tra  20.2      26  0.0017   13.6   6.3   29   58-86     83-111 (135)

No 1  
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]}
Probab=98.49  E-value=1e-06  Score=52.31  Aligned_cols=79  Identities=13%  Similarity=0.093  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEEEEEEC--CCCCCEEEEEEECCCCCEE
Q ss_conf             78899717999888855797568638999839937662464773899648898864217--7789648999975999584
Q T0541            14 TVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLD--GTANSYTLTVNVDPENAVN   91 (106)
Q Consensus        14 ~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~L~~G~s~tv~~~~~~~--~~~G~~ti~v~vD~~n~v~   91 (106)
                      ...+|+.++++++|+|.|.....+..+.+....-+-.......|+||++.++++...++  +.+|.|.+.+.+..++.-.
T Consensus        12 ~v~pG~~~~~~vtVtN~g~~~~~~~~~~~~~P~GW~v~~~~~~L~pG~s~~~~~~Vt~p~~a~~G~Y~i~~~a~~~~~~~   91 (103)
T d1w8oa1          12 ALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQGSVEPLMPGRQAKGQVTITVPAGTTPGRYRVGATLRTSAGNA   91 (103)
T ss_dssp             EECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEEEECCBCTTCEEEEEEEEECCTTCCCEEEEEEEEEEETTEEE
T ss_pred             EECCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCE
T ss_conf             12799718999999939998302106877089885625761534899808999999777778876279999999689625


Q ss_pred             E
Q ss_conf             1
Q T0541            92 E   92 (106)
Q Consensus        92 E   92 (106)
                      +
T Consensus        92 s   92 (103)
T d1w8oa1          92 S   92 (103)
T ss_dssp             E
T ss_pred             E
T ss_conf             8


No 2  
>d1ex0a3 b.1.5.1 (A:628-727) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
Probab=97.09  E-value=0.0031  Score=34.06  Aligned_cols=85  Identities=13%  Similarity=0.085  Sum_probs=64.4

Q ss_pred             CCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEE-EEEEECCCCCCCCEEEEEEEEEECCCCCCEEE
Q ss_conf             98607866025878899717999888855797568638999839937-66246477389964889886421777896489
Q T0541             2 IPDLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIV-VDTQTVTSLESENSTNVDFHWTLDGTANSYTL   80 (106)
Q Consensus         2 lPDL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~-~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti   80 (106)
                      +|||.|.-  +..+..|+.++++++.+|-=...-.++..++.-.|-. ......+.++||++.++++.+.|. ..|.+.+
T Consensus         2 ~P~l~I~v--~g~~~v~~~~~v~v~F~NPL~~~L~nc~~~vEG~GL~~~~~~~~~~v~p~~~~~~~~~~~P~-~~G~~~l   78 (100)
T d1ex0a3           2 IPEIIIKV--RGTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPW-VSGHRKL   78 (100)
T ss_dssp             CCCCEEEE--EECCBTTSCEEEEEEEECCSSSCEEEEEEEEEETTTEEEEEEEEEEECTTCEEEEEEEECCS-SCEEEEE
T ss_pred             CCCEEEEE--CCCCCCCCEEEEEEEEECCCCCCHHCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECC-CCCCEEE
T ss_conf             88689996--99744397089999998999872117999999289750069965860989999999999618-8313799


Q ss_pred             EEEECCCCC
Q ss_conf             999759995
Q T0541            81 TVNVDPENA   89 (106)
Q Consensus        81 ~v~vD~~n~   89 (106)
                      .|..|....
T Consensus        79 ~a~f~s~~l   87 (100)
T d1ex0a3          79 IASMSSDSL   87 (100)
T ss_dssp             EEEEECSSC
T ss_pred             EEEEECCCC
T ss_conf             999878620


No 3  
>d1g0da3 b.1.5.1 (A:584-684) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}
Probab=96.83  E-value=0.0089  Score=31.70  Aligned_cols=83  Identities=14%  Similarity=0.116  Sum_probs=65.0

Q ss_pred             CCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEE-EEE-CCCCCCCCEEEEEEEEEECCCCCCEEE
Q ss_conf             860786602587889971799988885579756863899983993766-246-477389964889886421777896489
Q T0541             3 PDLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVD-TQT-VTSLESENSTNVDFHWTLDGTANSYTL   80 (106)
Q Consensus         3 PDL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~-~~~-v~~L~~G~s~tv~~~~~~~~~~G~~ti   80 (106)
                      |||.|.  -+..+..|+.+++.++.+|-=...-.++...+.-.|-.-. ... .+.++||++.++++.+.|. ..|.+.+
T Consensus         2 P~l~I~--v~g~~~v~~~~~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~~v~p~~~~~~~~~~~P~-~~G~~~L   78 (101)
T d1g0da3           2 PELLVQ--VPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLSATQIHVNGAVAPSGKVSVKLSFSPM-RTGVRKL   78 (101)
T ss_dssp             CCCEEE--CCSCEETTCCEEEEEEEECCSSSCEESCEEEEEETTTEEEEEEECSSEECTTCEEEEEEEECCS-SCEEEEE
T ss_pred             CCEEEE--ECCCCCCCCEEEEEEEEECCCCCEECCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEEEECC-CCCCEEE
T ss_conf             977999--6997272970899999989998700079999993998865078725872999989999999708-8302799


Q ss_pred             EEEECCCC
Q ss_conf             99975999
Q T0541            81 TVNVDPEN   88 (106)
Q Consensus        81 ~v~vD~~n   88 (106)
                      .|..|...
T Consensus        79 ~a~f~s~~   86 (101)
T d1g0da3          79 LVDFDSDR   86 (101)
T ss_dssp             EEEEECSS
T ss_pred             EEEEECCH
T ss_conf             99984740


No 4  
>d2q3za3 b.1.5.1 (A:586-683) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
Probab=96.70  E-value=0.014  Score=30.62  Aligned_cols=83  Identities=11%  Similarity=0.088  Sum_probs=63.2

Q ss_pred             CCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEE--EEEC-CCCCCCCEEEEEEEEEECCCCCCEE
Q ss_conf             860786602587889971799988885579756863899983993766--2464-7738996488988642177789648
Q T0541             3 PDLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVD--TQTV-TSLESENSTNVDFHWTLDGTANSYT   79 (106)
Q Consensus         3 PDL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~--~~~v-~~L~~G~s~tv~~~~~~~~~~G~~t   79 (106)
                      |||.|.-  +..+..|+.+.++++.+|-=...-.++...+.-.|-.-.  ...+ ..++||++.++++.+.|. ..|.+.
T Consensus         2 P~l~I~v--~g~~~vg~~~~v~vsF~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~~~v~pg~~~~~~~~~~P~-~~G~~~   78 (98)
T d2q3za3           2 PEIKIRI--LGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPL-HMGLHK   78 (98)
T ss_dssp             CCCEEEE--ESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTTTCSSCEEEEECSCBCTTCEEEEEEEECCC-SSSCEE
T ss_pred             CCEEEEE--CCCCCCCCEEEEEEEEECCCCCCHHCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEEEECC-CCCCEE
T ss_conf             9769997--9973739748999999899987001789999918867675798588731999999999999808-842379


Q ss_pred             EEEEECCCC
Q ss_conf             999975999
Q T0541            80 LTVNVDPEN   88 (106)
Q Consensus        80 i~v~vD~~n   88 (106)
                      +.|..|...
T Consensus        79 L~a~f~s~~   87 (98)
T d2q3za3          79 LVVNFESDK   87 (98)
T ss_dssp             EEEEEECSS
T ss_pred             EEEEEECCC
T ss_conf             999986773


No 5  
>d1vjja3 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}
Probab=96.64  E-value=0.016  Score=30.40  Aligned_cols=83  Identities=11%  Similarity=0.085  Sum_probs=63.7

Q ss_pred             CCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEE--EEEECCCCCCCCEEEEEEEEEECCCCCCEEE
Q ss_conf             86078660258788997179998888557975686389998399376--6246477389964889886421777896489
Q T0541             3 PDLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVV--DTQTVTSLESENSTNVDFHWTLDGTANSYTL   80 (106)
Q Consensus         3 PDL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~--~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti   80 (106)
                      |||.|.-  +..+..|+.++++++.+|-=...-.++..++.-.|-.-  .....+.+.||++.++++.+.|. ..|.+.+
T Consensus         1 P~l~I~v--~~~~~v~~~~~v~vsf~NPL~~~L~~c~f~vEG~GL~~~~~~~~~~~v~p~~~~~~~~~~~P~-~~G~~~l   77 (99)
T d1vjja3           1 PTLTLEV--LNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKERSRVRFDILPS-RSGTKQL   77 (99)
T ss_dssp             CCEEEEE--CSCCBTTSCEEEEEEEECCSSSCBCSEEEEEECTTTSSSCEEEEECCBCTTCEEEEEEEECCC-SCEEEEE
T ss_pred             CCEEEEE--CCCCCCCCEEEEEEEEECCCCCCHHCEEEEEEECCCCCCCEEEECCCCCCCCEEEEEEEEECC-CCCCEEE
T ss_conf             9779996--997372973999999989998700279999990998876379765862989899999999708-8222799


Q ss_pred             EEEECCCC
Q ss_conf             99975999
Q T0541            81 TVNVDPEN   88 (106)
Q Consensus        81 ~v~vD~~n   88 (106)
                      .|..|...
T Consensus        78 ~a~f~s~~   85 (99)
T d1vjja3          78 LADFSCNK   85 (99)
T ss_dssp             EEEEECSS
T ss_pred             EEEEECCC
T ss_conf             99987874


No 6  
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2 (ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.92  E-value=0.094  Score=26.33  Aligned_cols=83  Identities=16%  Similarity=0.183  Sum_probs=57.1

Q ss_pred             CCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCC-CCEEEEEEEEEEC--CCCCCEE
Q ss_conf             860786602587889971799988885579756863899983993766246477389-9648898864217--7789648
Q T0541             3 PDLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLES-ENSTNVDFHWTLD--GTANSYT   79 (106)
Q Consensus         3 PDL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~L~~-G~s~tv~~~~~~~--~~~G~~t   79 (106)
                      |..++....|..+..|+.++++..|.  |........+.||.||..+.......+.. +...+..+.+...  ..+|.|+
T Consensus         2 P~~v~i~~~p~~v~~G~~v~l~C~v~--g~~p~p~~~i~W~~~~~~i~~~~~~~~~~~~~~~~s~l~~~~~~~d~g~~yt   79 (106)
T d1zxqa1           2 PRQVILTLQPTLVAVGKSFTIECRVP--TVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFS   79 (106)
T ss_dssp             CCCCEEEEESSEECTTSEEEEEEEEC--SCBCGGGEEEEEEETTEEEEEEECCSSTTCTTCEEEEEEEECCGGGGGCEEE
T ss_pred             CCCCEECCCCCEEECCCEEEEEEEEE--CCCCCCCCEEEEECCCEEEEECCCCEEEECCCCEEEEEEEEEEHHCCCCEEE
T ss_conf             81779268987883899799999990--7464997258997199990350421176215530579998503120796899


Q ss_pred             EEEEECCC
Q ss_conf             99997599
Q T0541            80 LTVNVDPE   87 (106)
Q Consensus        80 i~v~vD~~   87 (106)
                      -.|.-|-.
T Consensus        80 C~A~n~~~   87 (106)
T d1zxqa1          80 CLAVLDLM   87 (106)
T ss_dssp             EEEEEECG
T ss_pred             EEEEECCC
T ss_conf             99995677


No 7  
>d2vzsa2 b.1.4.1 (A:778-899) Exochitosanase CsxA, domains 2, 4 and 5 {Amycolatopsis orientalis [TaxId: 31958]}
Probab=93.85  E-value=0.17  Score=25.03  Aligned_cols=70  Identities=21%  Similarity=0.189  Sum_probs=45.6

Q ss_pred             CCEEEEEEEEEECCCCCCCCEEEEEEE-C--CEEEE---EEEC-CCCCCCCEEEEEEEEEECCC-CCCEEEEEEECCCCC
Q ss_conf             971799988885579756863899983-9--93766---2464-77389964889886421777-896489999759995
Q T0541            18 NTVNTMTATIENQGNKDSTSFNVSLLV-D--GIVVD---TQTV-TSLESENSTNVDFHWTLDGT-ANSYTLTVNVDPENA   89 (106)
Q Consensus        18 g~~~tv~vtV~N~G~~~a~~~~v~~y~-~--g~~~~---~~~v-~~L~~G~s~tv~~~~~~~~~-~G~~ti~v~vD~~n~   89 (106)
                      .....++++++|.+.....+|.++|.+ |  |..+.   +..- =.|-|||+.++++++..... .+..  .+.++..|.
T Consensus        37 dg~~~v~vtl~N~s~~~~pAff~rL~l~d~~g~~IlPv~~sDNY~sL~PGE~~~v~i~~~~~~~~~~~~--~l~v~G~Nv  114 (122)
T d2vzsa2          37 DGTTTTTVTLKNTSGGRLPAFYVDSKVVDSAGKPVLPVEWNDNAVSLWPGETTTLTAKYRTADLKGSKP--SVRISGWNT  114 (122)
T ss_dssp             TSEEEEEEEEEECCSSSCCEEEEEEEEECTTSCBCSSCEESSCSEEECTTCEEEEEEEEEGGGGTTCCC--EEEEEETTT
T ss_pred             CCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCEECCEEEECCEEEECCCCEEEEEEEECCCCCCCCCE--EEEEEEEEC
T ss_conf             980899999971898730778999996769999940117607768874898599999951534678750--899930104


No 8  
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]}
Probab=87.90  E-value=0.38  Score=23.13  Aligned_cols=64  Identities=11%  Similarity=0.129  Sum_probs=35.6

Q ss_pred             CCCCEEEEEEEEEECCCCCC----CCEEEEE--------------------EECCEEEEEEECCCCCCCCEEEEEEEEEE
Q ss_conf             89971799988885579756----8638999--------------------83993766246477389964889886421
Q T0541            16 VPNTVNTMTATIENQGNKDS----TSFNVSL--------------------LVDGIVVDTQTVTSLESENSTNVDFHWTL   71 (106)
Q Consensus        16 ~~g~~~tv~vtV~N~G~~~a----~~~~v~~--------------------y~~g~~~~~~~v~~L~~G~s~tv~~~~~~   71 (106)
                      .+|+.  ++++++|.|....    .++.+.-                    +..+..-.-.....|.||++.+++|+.+.
T Consensus        24 k~G~~--V~l~~~N~g~l~h~~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~~i~f~~p~  101 (129)
T d2ccwa1          24 KSCKQ--FTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTFDVSK  101 (129)
T ss_dssp             TTCSE--EEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEEEGGG
T ss_pred             CCCCE--EEEEEECCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
T ss_conf             69988--9999985996854204305222576118999999987310245689765310012224588845799999436


Q ss_pred             CCCCCCEEEE
Q ss_conf             7778964899
Q T0541            72 DGTANSYTLT   81 (106)
Q Consensus        72 ~~~~G~~ti~   81 (106)
                      ...+|+|.+.
T Consensus       102 ~~~~G~Y~f~  111 (129)
T d2ccwa1         102 IAAGENYAYF  111 (129)
T ss_dssp             SCTTCCEEEE
T ss_pred             CCCCCCEEEE
T ss_conf             6889609999


No 9  
>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=87.89  E-value=0.73  Score=21.67  Aligned_cols=68  Identities=10%  Similarity=0.112  Sum_probs=50.4

Q ss_pred             CCEEEEEEECC-CCCCCCEEEEEEEEEECCCCCCC--CEEEEEEECCEEEEEEEC---CCCCCCCEEEEEEEEE
Q ss_conf             86078660258-78899717999888855797568--638999839937662464---7738996488988642
Q T0541             3 PDLVPVSLTPV-TVVPNTVNTMTATIENQGNKDST--SFNVSLLVDGIVVDTQTV---TSLESENSTNVDFHWT   70 (106)
Q Consensus         3 PDL~v~~i~p~-~~~~g~~~tv~vtV~N~G~~~a~--~~~v~~y~~g~~~~~~~v---~~L~~G~s~tv~~~~~   70 (106)
                      |+..++++... .-..+..+.+++.|+|--..+..  .....++++|..+++...   ..+++.++..+++.+.
T Consensus        22 Pev~v~~v~i~~~sl~~~~~~~~l~V~NPN~~~l~i~~i~y~l~~~g~~ia~G~~~~~~~ipa~g~t~v~vpv~   95 (151)
T d1xo8a_          22 PEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVV   95 (151)
T ss_dssp             CCCBCSEEEECCCTTTEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCC
T ss_pred             CEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEEECCEEEEEEECCCCEEECCCCCEEEEEEEE
T ss_conf             80689666760458321389999874189862224210589998899788632158852666887079998899


No 10 
>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=87.21  E-value=0.81  Score=21.45  Aligned_cols=68  Identities=10%  Similarity=0.112  Sum_probs=49.7

Q ss_pred             CCEEEEEEECCC-CCCCCEEEEEEEEEECCCCCCC--CEEEEEEECCEEEEEEEC---CCCCCCCEEEEEEEEE
Q ss_conf             860786602587-8899717999888855797568--638999839937662464---7738996488988642
Q T0541             3 PDLVPVSLTPVT-VVPNTVNTMTATIENQGNKDST--SFNVSLLVDGIVVDTQTV---TSLESENSTNVDFHWT   70 (106)
Q Consensus         3 PDL~v~~i~p~~-~~~g~~~tv~vtV~N~G~~~a~--~~~v~~y~~g~~~~~~~v---~~L~~G~s~tv~~~~~   70 (106)
                      |+..++++.+.. -..+..+.+++.|+|--.....  .....++++|..+++...   ..|+++++.++++.+.
T Consensus        22 Pev~l~~v~i~~v~~~~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~vpv~   95 (151)
T d1xo8a_          22 PEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVV   95 (151)
T ss_dssp             CCCBCSEEEECCCTTTEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCC
T ss_pred             CEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCEEEEEEEEEEEECCEEEEEEECCCCCEECCCCCEEEEEEEE
T ss_conf             85999998963135424899999999798997665321799999999998857138974886888389999999


No 11 
>d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}
Probab=86.01  E-value=0.94  Score=21.10  Aligned_cols=68  Identities=12%  Similarity=0.222  Sum_probs=44.6

Q ss_pred             CCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEE-----EECCEEEEEE----ECCCCCCCCEEEEEEEEEE
Q ss_conf             8607866025878899717999888855797568638999-----8399376624----6477389964889886421
Q T0541             3 PDLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSL-----LVDGIVVDTQ----TVTSLESENSTNVDFHWTL   71 (106)
Q Consensus         3 PDL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~-----y~~g~~~~~~----~v~~L~~G~s~tv~~~~~~   71 (106)
                      ||+...=--...+..|+.+.+.+.++|..... ....+.+     |..|......    .--.|.|++..++.+...+
T Consensus         2 ~~v~~~lkl~~~~~iG~Df~v~l~~~N~s~~~-~~v~l~l~a~av~YtG~~~~~~~~~~~~v~L~p~~~~~v~~~v~y   78 (115)
T d1vjja2           2 PSIIGKLKVAGMLAVGKEVNLVLLLKNLSRDT-KTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISY   78 (115)
T ss_dssp             CSEEEEEEECSCCBTTSCEEEEEEEEECSSSC-EEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECH
T ss_pred             CCEEEEEECCCCCCCCCCEEEEEEEEECCCCC-EEEEEEEEEEEEEECCCCCHHEEEEEEEEEECCCCEEEEEEEECH
T ss_conf             97289999589997999889999999899988-999999999999958938534398448999889872899999979


No 12 
>d3es6b1 b.1.18.23 (B:1-118) Prolactin-inducible protein, PIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.44  E-value=1.2  Score=20.46  Aligned_cols=71  Identities=14%  Similarity=0.163  Sum_probs=44.4

Q ss_pred             ECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEE---EEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEEC
Q ss_conf             2587889971799988885579756863899983993766---24647738996488988642177789648999975
Q T0541            11 TPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVD---TQTVTSLESENSTNVDFHWTLDGTANSYTLTVNVD   85 (106)
Q Consensus        11 ~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~---~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~v~vD   85 (106)
                      -|.+...|+.+.++++|.|.-..... ..+.+..+.....   .....-|.+|++.++.|...+   .|...+.+.+.
T Consensus        14 lP~sv~rge~~~i~~~V~Nyl~~~~~-v~v~L~~s~~~~~~~~~~~~~cv~~~~~~t~~w~i~~---~g~v~itv~a~   87 (118)
T d3es6b1          14 IPKSVRPNDEVTAVLAVQTELKECMV-VKTYLISSIPLQGAFNYKYTACLCDDNPKTFYWDFYT---NRTVQIAAVVD   87 (118)
T ss_dssp             CCSEECSSCCEEEEEEEEECCSSCEE-EEEEEEESSCCCSGGGCEEEEEECSSSCEEEEEEECC---SSCEEEEEEEE
T ss_pred             CCCEEECCCEEEEEEEEEECCCCEEE-EEEEEECCCCEECCCCCCCCEEECCCCCEEEEEEEEE---CCCEEEEEEEE
T ss_conf             99467669889999999977442078-9999713777784688775648789995699999970---68387999999


No 13 
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]}
Probab=82.18  E-value=1.4  Score=20.19  Aligned_cols=61  Identities=16%  Similarity=0.198  Sum_probs=35.9

Q ss_pred             EEEEEEEEECCCCCC----CCEEEEEEEC--------------------CEEEEEEECCCCCCCCEEEEEEEEEECCCCC
Q ss_conf             799988885579756----8638999839--------------------9376624647738996488988642177789
Q T0541            21 NTMTATIENQGNKDS----TSFNVSLLVD--------------------GIVVDTQTVTSLESENSTNVDFHWTLDGTAN   76 (106)
Q Consensus        21 ~tv~vtV~N~G~~~a----~~~~v~~y~~--------------------g~~~~~~~v~~L~~G~s~tv~~~~~~~~~~G   76 (106)
                      -+++++++|.|..+.    -++.+.-..+                    +..-.-.....|.||++.+++|+.+....+|
T Consensus        27 e~v~i~~~N~g~lph~~~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~~i~f~~p~~~~~G  106 (129)
T d1cuoa_          27 AEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDE  106 (129)
T ss_dssp             SEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTS
T ss_pred             EEEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCC
T ss_conf             79999999699687026776002215533899999987642112478998522332132327665525999723568896


Q ss_pred             CEEEE
Q ss_conf             64899
Q T0541            77 SYTLT   81 (106)
Q Consensus        77 ~~ti~   81 (106)
                      +|.+.
T Consensus       107 ~Y~f~  111 (129)
T d1cuoa_         107 AYTYF  111 (129)
T ss_dssp             CEEEE
T ss_pred             EEEEE
T ss_conf             08999


No 14 
>d1jz8a2 b.1.4.1 (A:626-730) beta-Galactosidase, domains 2 and 4 {Escherichia coli [TaxId: 562]}
Probab=79.00  E-value=1.8  Score=19.59  Aligned_cols=61  Identities=15%  Similarity=0.119  Sum_probs=39.7

Q ss_pred             EEEEEECCCCCC-CCEEE--EEEECCEEEEEEECC-CCCCCCEEEEEEEEEEC-CCCCCEEEEEEE
Q ss_conf             988885579756-86389--998399376624647-73899648898864217-778964899997
Q T0541            24 TATIENQGNKDS-TSFNV--SLLVDGIVVDTQTVT-SLESENSTNVDFHWTLD-GTANSYTLTVNV   84 (106)
Q Consensus        24 ~vtV~N~G~~~a-~~~~v--~~y~~g~~~~~~~v~-~L~~G~s~tv~~~~~~~-~~~G~~ti~v~v   84 (106)
                      +++|+|.-.-.. .++..  .++.||..+.+..+. .++||++.++.+...+. ...+.|.+.+.+
T Consensus        10 ~v~V~N~~~F~~l~~~~l~w~l~~dG~~i~sg~~~l~i~P~~s~~i~lp~~~~~~~~~e~~L~v~~   75 (105)
T d1jz8a2          10 TIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRV   75 (105)
T ss_dssp             EEEEEECCSSCCCTTCEEEEEEEETTEEEEEEEEECCCCTTCEEEEECCCCCCCCSSEEEEEEEEE
T ss_pred             EEEEEEEEECCCCCCCEEEEEEEECCEEEECCEECCCCCCCCCEEEECCCCCCCCCCCEEEEEEEE
T ss_conf             999998810356778689999998999976442745328895089976787767888439999999


No 15 
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1 (ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.80  E-value=2.3  Score=19.09  Aligned_cols=82  Identities=13%  Similarity=0.165  Sum_probs=53.7

Q ss_pred             CCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEE
Q ss_conf             98607866025878899717999888855797568638999839937662464773899648898864217778964899
Q T0541             2 IPDLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLT   81 (106)
Q Consensus         2 lPDL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~   81 (106)
                      .|+-+...-.|.....|+.++++..+.  |........+.||-++..+.......  .....++.+.-.....+|.|+-.
T Consensus         3 ~P~~v~i~p~~~~v~~G~~~~L~C~v~--g~~P~p~~~v~W~~~~~~l~~~~~~~--~~~~s~l~i~~~~~dd~g~ytC~   78 (103)
T d1iama1           3 TPERVELAPLPSWQPVGKQLTLRCQVE--GGAPRAQLTVVLLRGEKELKREPAVG--EPAEVTTTVLVRRDHHGAQFSCR   78 (103)
T ss_dssp             CCSEEEECCCCSEECTTSEEEEEEEEE--CCBCGGGEEEEEEETTEEEEEEECCT--TTEEEEEEEECCSSCSSCEEEEE
T ss_pred             CCCCEEEECCCCEEECCCEEEEEEEEC--CCCCCCCEEEEECCCCCCCCCCCCCC--CCCEEEEEEEEEHHHCCCEEEEE
T ss_conf             899369837996693999799999963--88998750789735543010133202--45058999963216789799999


Q ss_pred             EEECCC
Q ss_conf             997599
Q T0541            82 VNVDPE   87 (106)
Q Consensus        82 v~vD~~   87 (106)
                      |.-+-.
T Consensus        79 A~n~~g   84 (103)
T d1iama1          79 TELDLR   84 (103)
T ss_dssp             EEEECG
T ss_pred             EEECCC
T ss_conf             995888


No 16 
>d1exha_ b.2.2.1 (A:) Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD {Cellulomonas fimi [TaxId: 1708]}
Probab=73.51  E-value=2.6  Score=18.77  Aligned_cols=54  Identities=17%  Similarity=0.192  Sum_probs=36.9

Q ss_pred             CCEEEEEEEEEECCCCCCCCEEEEEEEC-CEEEEEEE------------------CCCCCCCCEEEEEEEEEE
Q ss_conf             9717999888855797568638999839-93766246------------------477389964889886421
Q T0541            18 NTVNTMTATIENQGNKDSTSFNVSLLVD-GIVVDTQT------------------VTSLESENSTNVDFHWTL   71 (106)
Q Consensus        18 g~~~tv~vtV~N~G~~~a~~~~v~~y~~-g~~~~~~~------------------v~~L~~G~s~tv~~~~~~   71 (106)
                      +..+...++|+|.|..+.....+.|-+. +..+....                  -..|+||++.++.|....
T Consensus        18 ~~Gf~~~vtVtN~~~~~~~gW~v~~~~p~g~~i~~~Wna~~~~~G~~vtv~~~~wN~~i~~G~s~~fGF~~~~   90 (110)
T d1exha_          18 NTGFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAGGTAQFGFNGSH   90 (110)
T ss_dssp             SSCEEEEEEEEECSSSCEESEEEEEECSSCCEEEEEESSEEEEETTEEEEEECSSTTEECSSEECCEEEEEEC
T ss_pred             CCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEECEEEEECCCEEEEECCCCCCCCCCCCEEEEEEEEEC
T ss_conf             9986899999949998414739999978998985002229970598899957741675399998899799617


No 17 
>d1jv2a2 b.1.15.1 (A:599-737) Thigh, calf-1 and calf-2 domains of integrin alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.20  E-value=2.7  Score=18.73  Aligned_cols=87  Identities=9%  Similarity=0.106  Sum_probs=49.4

Q ss_pred             CCCEEEEEE-ECCCC--CCCCEEEEEEEEEECCCCCCCCEEEEEEECC--------------EE------------EEEE
Q ss_conf             986078660-25878--8997179998888557975686389998399--------------37------------6624
Q T0541             2 IPDLVPVSL-TPVTV--VPNTVNTMTATIENQGNKDSTSFNVSLLVDG--------------IV------------VDTQ   52 (106)
Q Consensus         2 lPDL~v~~i-~p~~~--~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g--------------~~------------~~~~   52 (106)
                      .|||.+... .....  -....+.+.++|+|.|.. |....+.+....              ..            ....
T Consensus         5 ~sDL~l~a~~~~~~l~vGs~~~l~l~v~V~N~GE~-AY~a~l~v~~P~~L~y~~v~~~~~~~~~v~C~~~~~~~~~~v~C   83 (139)
T d1jv2a2           5 KPKLEVSVDSDQKKIYIGDDNPLTLIVKAQNQGEG-AYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVC   83 (139)
T ss_dssp             CCCEEEEECCTTCCEESSSCEEEEEEEEEEECSSC-BSSCEEEEECCTTCCEEEECCSSTTSBCCCCEEEESSSCEEEEE
T ss_pred             CCCEEEEEECCCCEEEECCCCEEEEEEEEEECCCC-HHHEEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCEEEEE
T ss_conf             54749999758997997899889999999989977-00179999869997788466057888511426667898279998


Q ss_pred             ECC-CCCCCCEEEEEEEEEECC-C-CC-CEEEEEEECCCCC
Q ss_conf             647-738996488988642177-7-89-6489999759995
Q T0541            53 TVT-SLESENSTNVDFHWTLDG-T-AN-SYTLTVNVDPENA   89 (106)
Q Consensus        53 ~v~-~L~~G~s~tv~~~~~~~~-~-~G-~~ti~v~vD~~n~   89 (106)
                      .++ +|.+|+..+..+.|.... . .+ ...|.+.+-..|.
T Consensus        84 ~lGnP~~~~~~~~f~l~f~~~~~~~~~~~l~~~~~~~Stn~  124 (139)
T d1jv2a2          84 DLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNL  124 (139)
T ss_dssp             ECCSSBCSSCBCCEEEEEEECCCSSSSSEEEEEEEEECSCS
T ss_pred             ECCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECCC
T ss_conf             78996669999999999970003788868999999986899


No 18 
>d1yq2a1 b.1.4.1 (A:610-721) beta-Galactosidase, domains 2 and 4 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=71.29  E-value=3  Score=18.48  Aligned_cols=62  Identities=18%  Similarity=0.186  Sum_probs=38.5

Q ss_pred             EEEEEEECCCCC-CCCEEEE--EEECCEEEEEEECC------CCCCCCEEEEEEEEEECCCCCCEEEEEEE
Q ss_conf             998888557975-6863899--98399376624647------73899648898864217778964899997
Q T0541            23 MTATIENQGNKD-STSFNVS--LLVDGIVVDTQTVT------SLESENSTNVDFHWTLDGTANSYTLTVNV   84 (106)
Q Consensus        23 v~vtV~N~G~~~-a~~~~v~--~y~~g~~~~~~~v~------~L~~G~s~tv~~~~~~~~~~G~~ti~v~v   84 (106)
                      -+++|+|.=... ..++...  ++.||..+.+..+.      .+.++++..+.+........++|.+.+.+
T Consensus        14 ~~v~V~N~~~F~~l~~~~~~w~l~~dG~~i~sG~l~~~~~~~~~~~~~s~~i~lp~~~~~~~~e~~L~v~~   84 (112)
T d1yq2a1          14 PTLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSDGPLRAGESATIALPAMPAAPLGETWLTVEA   84 (112)
T ss_dssp             CEEEEEECCSSCCSTTEEEEEEEEETTEEEEEEEEECBCSSSBCCTTCEEEEECCCCCCCSSSCEEEEEEE
T ss_pred             CEEEEEECCCCCCCCCCEEEEEEEECCEEEECCEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEE
T ss_conf             67999983406864180899999989969981558267555588998799996786568988329999999


No 19 
>d1exha_ b.2.2.1 (A:) Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD {Cellulomonas fimi [TaxId: 1708]}
Probab=71.29  E-value=3  Score=18.48  Aligned_cols=53  Identities=15%  Similarity=0.169  Sum_probs=35.3

Q ss_pred             CCEEEEEEEEEECCCCCCCCEEEEEEECC-EEEEEE------------------ECCCCCCCCEEEEEEEEE
Q ss_conf             97179998888557975686389998399-376624------------------647738996488988642
Q T0541            18 NTVNTMTATIENQGNKDSTSFNVSLLVDG-IVVDTQ------------------TVTSLESENSTNVDFHWT   70 (106)
Q Consensus        18 g~~~tv~vtV~N~G~~~a~~~~v~~y~~g-~~~~~~------------------~v~~L~~G~s~tv~~~~~   70 (106)
                      +..+.-+++|+|.|..+.....+.|-+.+ ..+...                  .-..|+||++.++.|...
T Consensus        18 ~~Gf~~~vtvtN~~~~~i~gW~v~~~~~~~~~i~~~Wna~~s~~g~~~t~~~~~WN~~i~~G~s~~fGF~~~   89 (110)
T d1exha_          18 NTGFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAGGTAQFGFNGS   89 (110)
T ss_dssp             SSCEEEEEEEEECSSSCEESEEEEEECSSCCEEEEEESSEEEEETTEEEEEECSSTTEECSSEECCEEEEEE
T ss_pred             CCCEEEEEEEEECCCCCCCCCEEEEECCCCCEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCEEEEEEEE
T ss_conf             983788888872899842163888981899674113550787529758885464277518997178988840


No 20 
>d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
Probab=70.35  E-value=3.1  Score=18.37  Aligned_cols=58  Identities=12%  Similarity=0.033  Sum_probs=38.9

Q ss_pred             CCCCCCCEEEEEEEEEECCCCCCCCEEEEEE-----ECCEEEEEE----ECCCCCCCCEEEEEEEEEE
Q ss_conf             8788997179998888557975686389998-----399376624----6477389964889886421
Q T0541            13 VTVVPNTVNTMTATIENQGNKDSTSFNVSLL-----VDGIVVDTQ----TVTSLESENSTNVDFHWTL   71 (106)
Q Consensus        13 ~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y-----~~g~~~~~~----~v~~L~~G~s~tv~~~~~~   71 (106)
                      ..+.-|+.+.+.++++|..... ....+.+.     ..|......    .--.|+|+++.++.+...+
T Consensus        10 ~~~~iG~df~v~i~~~N~s~~~-~~v~l~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~v~~~v~~   76 (112)
T d1ex0a2          10 ENAVLGKDFKLSITFRNNSHNR-YTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQA   76 (112)
T ss_dssp             CCCBTTCCEEEEEEEEECSSSC-EEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred             CCCCCCCCEEEEEEEEECCCCC-EEEEEEEEEEEEEECCCCCHHEEEEEEEEEECCCCEEEEEEEECH
T ss_conf             6740699989999999799887-999999999999957928336278128999889998999999939


No 21 
>d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}
Probab=66.52  E-value=3.8  Score=17.93  Aligned_cols=61  Identities=10%  Similarity=0.188  Sum_probs=38.3

Q ss_pred             EECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEE-----ECCEEEEE---E-ECCCCCCCCEEEEEEEEEE
Q ss_conf             0258788997179998888557975686389998-----39937662---4-6477389964889886421
Q T0541            10 LTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLL-----VDGIVVDT---Q-TVTSLESENSTNVDFHWTL   71 (106)
Q Consensus        10 i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y-----~~g~~~~~---~-~v~~L~~G~s~tv~~~~~~   71 (106)
                      +.-+.+.-|+.+.+.+.++|..... ....+.+.     .+|.....   . .--.|.|++...+.+...+
T Consensus         6 ik~~~~~~G~Df~v~i~~~N~s~~~-~~v~l~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~v~~~i~y   75 (112)
T d1g0da2           6 IKHAQPVFGTDFDVIVEVKNEGGRD-AHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHY   75 (112)
T ss_dssp             EEECCCBTTCCEEEEEEEEECSSSC-EEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECH
T ss_pred             EECCCCCCCCCEEEEEEEEECCCCC-EEEEEEEEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEEEEECH
T ss_conf             9679970488979999999799988-999999999999948927450458118999889981899999949


No 22 
>d1d3ii_ i.6.1.1 (I:) HRV14 complexed with d1d2-ICAM-1 {Human rhinovirus 14 [TaxId: 12131]}
Probab=59.17  E-value=5.3  Score=17.19  Aligned_cols=72  Identities=13%  Similarity=0.141  Sum_probs=39.4

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCC
Q ss_conf             5878899717999888855797568638999839937662464773899648898864217778964899997599
Q T0541            12 PVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVNVDPE   87 (106)
Q Consensus        12 p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~v~vD~~   87 (106)
                      +.....|+.++++..+.  |........+.||-+|..+......  .-....++.+.-.....+|.|+=.|.-|-.
T Consensus        95 ~~~v~~G~~~~l~C~v~--~~~P~~~~~i~W~k~g~~l~~~~~~--~~~~~~~l~~~~~~~d~g~~Y~C~A~n~lg  166 (185)
T d1d3ii_          95 PSWQPVGKNLTLRCQVE--GGAPRANLTVVLLRGEKELKREPAV--GEPAEVTTTVLVRRDHHGANFSCRTELDLR  166 (185)
T ss_pred             CCEEECCCEEEEEEEEC--CCCCCCCCEEEEECCCEEEECCCCC--CCCCEEEEEEEECCCCCCEEEEEEEEECCC
T ss_conf             73672396599999867--8998200117771288787311025--788159999864320028079999982667


No 23 
>d2ag4a1 b.95.1.1 (A:2-164) Ganglioside M2 (gm2) activator {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.35  E-value=6.4  Score=16.74  Aligned_cols=85  Identities=14%  Similarity=0.110  Sum_probs=48.5

Q ss_pred             EEEEEE--ECCCCCCCCEEEEEEEEEECCCCCCC---CEEEEEEECCEEEEEE---------------------------
Q ss_conf             078660--25878899717999888855797568---6389998399376624---------------------------
Q T0541             5 LVPVSL--TPVTVVPNTVNTMTATIENQGNKDST---SFNVSLLVDGIVVDTQ---------------------------   52 (106)
Q Consensus         5 L~v~~i--~p~~~~~g~~~tv~vtV~N~G~~~a~---~~~v~~y~~g~~~~~~---------------------------   52 (106)
                      +.+.++  +|..+..|+.+++++...=.-...+.   ...|...+.+.++..-                           
T Consensus        16 ~~i~~l~l~PdP~~~gg~lti~~~~~~~~~i~~~~~v~l~v~k~~~~~~i~iPC~~~~GSC~y~d~C~~~~~~~~~~~~c   95 (163)
T d2ag4a1          16 AVIRSLTLEPDPIVVPGNVTLSVVGSTSVPLSSPLKVDLVLEKEVAGLWIKIPCTDYIGSCTFEHFCDVLDMLIPTGEPC   95 (163)
T ss_dssp             EEEEEEEEESSSEEESEEEEEEEEEEESSCBCSSCEEEEEEEEEETTEEEECBCBTTBSBCEECCHHHHHHHHSCTTSCC
T ss_pred             EEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf             58804797259917896589999999843328984899999998431799853552556433210446576325556657


Q ss_pred             -------EC---CCCCCCCEEEE--EE-----EEEECCCCCCEEEEEEECCCCC
Q ss_conf             -------64---77389964889--88-----6421777896489999759995
Q T0541            53 -------TV---TSLESENSTNV--DF-----HWTLDGTANSYTLTVNVDPENA   89 (106)
Q Consensus        53 -------~v---~~L~~G~s~tv--~~-----~~~~~~~~G~~ti~v~vD~~n~   89 (106)
                             .+   =++++|...--  .+     .++...+.|.|+++++++.++.
T Consensus        96 ~~~~~~~~~~c~CPi~~G~y~l~~s~~~ip~v~LP~~l~~G~Y~v~~~~~~~g~  149 (163)
T d2ag4a1          96 PEPLRTYGLPCHCPFKEGTYSLPKSEFVVPDLELPSWLTTGNYRIESVLSSSGK  149 (163)
T ss_dssp             CTTHHHHTCCCSSCBCSEEEEEEEEEEEECCCCCCTTCSSEEEEEEEEEEETTE
T ss_pred             CCHHHCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEEEEECCCC
T ss_conf             521202697334876886778021132066644567248965999999958997


No 24 
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]}
Probab=46.75  E-value=8.6  Score=16.08  Aligned_cols=28  Identities=14%  Similarity=0.172  Sum_probs=19.8

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCCEEEE
Q ss_conf             4773899648898864217778964899
Q T0541            54 VTSLESENSTNVDFHWTLDGTANSYTLT   81 (106)
Q Consensus        54 v~~L~~G~s~tv~~~~~~~~~~G~~ti~   81 (106)
                      ...|.||++.+++|+.+....+|+|.+.
T Consensus        84 t~~l~pGes~~i~f~~p~~~~~G~Y~f~  111 (128)
T d1jzga_          84 TKLIGSGEKDSVTFDVSKLKEGEQYMFF  111 (128)
T ss_dssp             CCCBCTTCEEEEEEEGGGCCTTCCEEEE
T ss_pred             CCCCCCCCEEEEEEEEECCCCCCEEEEE
T ss_conf             4001799548999970226789508999


No 25 
>d1df0a2 b.14.1.1 (A:356-514) Calpain large subunit, middle domain (domain III) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}
Probab=46.15  E-value=8.8  Score=16.03  Aligned_cols=39  Identities=8%  Similarity=0.084  Sum_probs=27.5

Q ss_pred             CCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEECCC
Q ss_conf             7389964889886421777896489999759995841217
Q T0541            56 SLESENSTNVDFHWTLDGTANSYTLTVNVDPENAVNEGNE   95 (106)
Q Consensus        56 ~L~~G~s~tv~~~~~~~~~~G~~ti~v~vD~~n~v~E~~e   95 (106)
                      .|+||...-+..++.+ ...|.|.|++.-+..-.+.|+||
T Consensus       121 ~L~pG~Y~IVPsT~~p-~~~g~F~Lrvfs~~~~~~~el~~  159 (159)
T d1df0a2         121 KLPPGEYVLVPSTFEP-HKNGDFCIRVFSEKKADYQTVDD  159 (159)
T ss_dssp             EECSEEEEEEEEESSS-SCCEEEEEEEEESSCEEEEECCC
T ss_pred             EECCCCEEEEEEECCC-CCEEEEEEEEEECCCCCEEECCC
T ss_conf             7189888999484489-98762799999889997583788


No 26 
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=44.28  E-value=9.4  Score=15.87  Aligned_cols=63  Identities=22%  Similarity=0.263  Sum_probs=36.3

Q ss_pred             EEEEEEEEEECCCCCCCCEEEEEEE---------CCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEE
Q ss_conf             1799988885579756863899983---------9937662464773899648898864217778964899997
Q T0541            20 VNTMTATIENQGNKDSTSFNVSLLV---------DGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVNV   84 (106)
Q Consensus        20 ~~tv~vtV~N~G~~~a~~~~v~~y~---------~g~~~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~v~v   84 (106)
                      .-++.++++|.+....-++.+...-         +...........+.||++.++.|...  ..+|.|.+.--+
T Consensus        67 Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~f~~~--~~pGty~YhCh~  138 (153)
T d1e30a_          67 GATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNFTWH--PTAGTYYYVCQI  138 (153)
T ss_dssp             TCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEEEEEC--CCSEEEEEECCS
T ss_pred             CCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEC--CCCEEEEEECCC
T ss_conf             999999999489998544798707987422456666677763023644998789999847--998579996995


No 27 
>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
Probab=43.81  E-value=9.6  Score=15.83  Aligned_cols=59  Identities=17%  Similarity=0.140  Sum_probs=40.4

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCCCCEEEEE-----EECCEEEE---EE-ECC-CCCCCCEEEEEEEEEE
Q ss_conf             5878899717999888855797568638999-----83993766---24-647-7389964889886421
Q T0541            12 PVTVVPNTVNTMTATIENQGNKDSTSFNVSL-----LVDGIVVD---TQ-TVT-SLESENSTNVDFHWTL   71 (106)
Q Consensus        12 p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~-----y~~g~~~~---~~-~v~-~L~~G~s~tv~~~~~~   71 (106)
                      .+.+.-|+.+.+.+.++|..... ....+.+     |.+|....   .. ... .|+|+++.++.+...+
T Consensus         9 ~~~~~iG~Df~v~~~~~N~s~~~-~~v~l~l~a~~v~YtG~~~~~~~~k~~~~v~L~p~~~~~v~~~v~y   77 (114)
T d2q3za2           9 GQSMNMGSDFDVFAHITNNTAEE-YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY   77 (114)
T ss_dssp             CSCCBTTCCEEEEEEEEECSSSC-EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred             CCCCCCCCCEEEEEEEEECCCCC-EEEEEEEEEEEEEECCCCCCEEEEECCEEEEECCCCEEEEEEEECH
T ss_conf             89986898889999999289987-9999999999999699195216870003899899987999999969


No 28 
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]}
Probab=43.44  E-value=9.7  Score=15.79  Aligned_cols=29  Identities=10%  Similarity=0.182  Sum_probs=19.9

Q ss_pred             ECCCCCCCCEEEEEEEEEECCCCCCEEEE
Q ss_conf             64773899648898864217778964899
Q T0541            53 TVTSLESENSTNVDFHWTLDGTANSYTLT   81 (106)
Q Consensus        53 ~v~~L~~G~s~tv~~~~~~~~~~G~~ti~   81 (106)
                      ....|.||++.+++|+.+-...+|.|.+.
T Consensus        83 ~t~~l~pGes~~i~f~~p~~~~~G~Y~f~  111 (128)
T d1nwpa_          83 HTKVIGAGEKDSVTFDVSKLAAGEKYGFF  111 (128)
T ss_dssp             ECCCBCTTCEEEEEEEGGGSCTTSCEEEE
T ss_pred             ECCCCCCCCCEEEEEEECCCCCCCEEEEE
T ss_conf             31211589824999981256889619999


No 29 
>d1kful2 b.14.1.1 (L:356-514) Calpain large subunit, middle domain (domain III) {Human (Homo sapiens), M-type [TaxId: 9606]} SCOP: d1df0a2 d1qxpa3
Probab=42.82  E-value=9.9  Score=15.74  Aligned_cols=39  Identities=8%  Similarity=0.095  Sum_probs=29.1

Q ss_pred             CCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEECCC
Q ss_conf             7389964889886421777896489999759995841217
Q T0541            56 SLESENSTNVDFHWTLDGTANSYTLTVNVDPENAVNEGNE   95 (106)
Q Consensus        56 ~L~~G~s~tv~~~~~~~~~~G~~ti~v~vD~~n~v~E~~e   95 (106)
                      .|+||...-+..++.+ ...|.+.|++.-+..-.+.|++|
T Consensus       121 ~L~pG~Y~IVPsT~~p-~~eg~F~LrVfs~~~~~~~~l~e  159 (159)
T d1kful2         121 KLPPGEYILVPSTFEP-NKDGDFCIRVFSEKKADYQAVDD  159 (159)
T ss_dssp             ECCSSEEEEEEEESSS-SCCEEEEEEEEESSCCCEECCCC
T ss_pred             EECCCCEEEEEEECCC-CCCCCEEEEEEECCCCEEEECCC
T ss_conf             7379838998661178-99746589997357747987589


No 30 
>d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]} SCOP: d1evub2 d1evua2 d1ex0b2
Probab=41.12  E-value=11  Score=15.60  Aligned_cols=58  Identities=12%  Similarity=0.033  Sum_probs=38.2

Q ss_pred             CCCCCCCEEEEEEEEEECCCCCCCCEEEEEE-----ECCEEEEEE----ECCCCCCCCEEEEEEEEEE
Q ss_conf             8788997179998888557975686389998-----399376624----6477389964889886421
Q T0541            13 VTVVPNTVNTMTATIENQGNKDSTSFNVSLL-----VDGIVVDTQ----TVTSLESENSTNVDFHWTL   71 (106)
Q Consensus        13 ~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y-----~~g~~~~~~----~v~~L~~G~s~tv~~~~~~   71 (106)
                      ..+.-|+.+.+.+.++|..... ....+.+.     ..|......    ..-.|.|+++.++.+...+
T Consensus        15 ~~~~iG~df~v~i~~~N~s~~~-~tv~l~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~i~~~i~y   81 (117)
T d1ex0a2          15 ENAVLGKDFKLSITFRNNSHNR-YTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQA   81 (117)
T ss_dssp             CCCBTTCCEEEEEEEEECSSSC-EEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred             CCEEECCCCEEEEEEECCCCCC-EEEEEEEEEEEEEECCEECHHEEEEEEEEEECCCCCEEEEEEEEH
T ss_conf             8902079827999986299984-599999899999707856201143211899677882599998874


No 31 
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.66  E-value=11  Score=15.47  Aligned_cols=66  Identities=9%  Similarity=0.027  Sum_probs=39.9

Q ss_pred             ECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEEC---CCCCCCCEEEEEEEEEECCCCCCEEEEE
Q ss_conf             25878899717999888855797568638999839937662464---7738996488988642177789648999
Q T0541            11 TPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTV---TSLESENSTNVDFHWTLDGTANSYTLTV   82 (106)
Q Consensus        11 ~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v---~~L~~G~s~tv~~~~~~~~~~G~~ti~v   82 (106)
                      .+.....|+.++|...+.  +    +...+.||-+|..+....-   ....-|...++.+.-.-..-.|.|+..+
T Consensus         8 ~~~~v~~G~~v~l~C~v~--~----p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a   76 (90)
T d1x44a1           8 EDTTAYCGERVELECEVS--E----DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMT   76 (90)
T ss_dssp             CCEEEETTEEEEEEEECS--S----SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEE
T ss_pred             CCEEEECCCCEEEEEEEC--C----CCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEE
T ss_conf             798991799199999999--9----88569999951013788871179997278039999856136278999999


No 32 
>d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]}
Probab=36.32  E-value=13  Score=15.18  Aligned_cols=67  Identities=13%  Similarity=0.089  Sum_probs=41.7

Q ss_pred             CCCCEEEEEEEEEECCCCCCCCEEEEEEECCEE-EEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEECC
Q ss_conf             899717999888855797568638999839937-66246477389964889886421777896489999759
Q T0541            16 VPNTVNTMTATIENQGNKDSTSFNVSLLVDGIV-VDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVNVDP   86 (106)
Q Consensus        16 ~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~-~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~v~vD~   86 (106)
                      .-.+..+++++|+..-.....+..|.|..++.- +...... =......++.++-   ...|.+++++.++.
T Consensus        15 dG~d~~t~tatv~D~~gnpv~g~~V~f~~~~~~~~~~~~~~-Td~~G~a~v~lts---t~aG~~~VtAt~~g   82 (94)
T d1cwva1          15 NGKTAITVEFTVADFEGKPLAGQEVVITTNNGALPNKITEK-TDANGVARIALTN---TTDGVTVVTAEVEG   82 (94)
T ss_dssp             SSSSCEEEEEEEECTTSCBCCSCEEEEECCTTCBSCEEEEE-CCTTSEEEEEEBC---SSCEEEEEEEEETT
T ss_pred             CCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEECCEEE-ECCCEEEEEEEEE---CCCEEEEEEEEECC
T ss_conf             89131999999994998996898999998899588034369-8999899999995---78668999999998


No 33 
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}
Probab=36.26  E-value=13  Score=15.17  Aligned_cols=24  Identities=13%  Similarity=0.387  Sum_probs=14.9

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCCEEE
Q ss_conf             477389964889886421777896489
Q T0541            54 VTSLESENSTNVDFHWTLDGTANSYTL   80 (106)
Q Consensus        54 v~~L~~G~s~tv~~~~~~~~~~G~~ti   80 (106)
                      ...++||++.++.|..  + .+|.|-+
T Consensus       105 ~~~I~PG~t~ty~f~a--~-~~Gt~~y  128 (159)
T d1oe2a1         105 LTNVNPGEQATLRFKA--D-RSGTFVY  128 (159)
T ss_dssp             GCCBCTTEEEEEEEEC--C-SCEEEEE
T ss_pred             CCCCCCCCEEEEEEEC--C-CCCEEEE
T ss_conf             6569989868899986--8-9965898


No 34 
>d2ag4a1 b.95.1.1 (A:2-164) Ganglioside M2 (gm2) activator {Human (Homo sapiens) [TaxId: 9606]} SCOP: d1pu5a_ d2ag2c1 d1pu5c_ d1g13a_
Probab=35.99  E-value=13  Score=15.15  Aligned_cols=85  Identities=14%  Similarity=0.110  Sum_probs=46.4

Q ss_pred             EEEEEE--ECCCCCCCCEEEEEEEEEECCCCCCC---CEEEEEEECCEEEEEE---------------------------
Q ss_conf             078660--25878899717999888855797568---6389998399376624---------------------------
Q T0541             5 LVPVSL--TPVTVVPNTVNTMTATIENQGNKDST---SFNVSLLVDGIVVDTQ---------------------------   52 (106)
Q Consensus         5 L~v~~i--~p~~~~~g~~~tv~vtV~N~G~~~a~---~~~v~~y~~g~~~~~~---------------------------   52 (106)
                      +.+.++  +|..+..|+.+++++...=.....+.   ...|...+-|-++..-                           
T Consensus        16 ~~i~sl~i~PdP~~~gg~lti~~~g~~~~~i~~g~~v~i~v~k~~~g~~~~Ipc~~~~GSCty~dlC~~l~~~~~~~~~C   95 (163)
T d2ag4a1          16 AVIRSLTLEPDPIVVPGNVTLSVVGSTSVPLSSPLKVDLVLEKEVAGLWIKIPCTDYIGSCTFEHFCDVLDMLIPTGEPC   95 (163)
T ss_dssp             EEEEEEEEESSSEEESEEEEEEEEEEESSCBCSSCEEEEEEEEEETTEEEECBCBTTBSBCEECCHHHHHHHHSCTTSCC
T ss_pred             EEEEEEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEEEECCEECCCCEECCHHHHHHHHHCCCCCCC
T ss_conf             79888787207865998569999998623136980799999983556899802131223303104677787605665546


Q ss_pred             -------EC---CCCCCCCEEEE--EE-----EEEECCCCCCEEEEEEECCCCC
Q ss_conf             -------64---77389964889--88-----6421777896489999759995
Q T0541            53 -------TV---TSLESENSTNV--DF-----HWTLDGTANSYTLTVNVDPENA   89 (106)
Q Consensus        53 -------~v---~~L~~G~s~tv--~~-----~~~~~~~~G~~ti~v~vD~~n~   89 (106)
                             .+   =++++|...--  .|     ..+...+.|.|++.++.|..+.
T Consensus        96 pe~~~~~g~~~~CPi~~G~y~l~~s~~~ip~v~lP~~lp~G~Y~v~~~~~~~~~  149 (163)
T d2ag4a1          96 PEPLRTYGLPCHCPFKEGTYSLPKSEFVVPDLELPSWLTTGNYRIESVLSSSGK  149 (163)
T ss_dssp             CTTHHHHTCCCSSCBCSEEEEEEEEEEEECCCCCCTTCSSEEEEEEEEEEETTE
T ss_pred             CHHHHHCCCCEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCC
T ss_conf             204784488604753798036201467846756877315970799999808998


No 35 
>d1nepa_ b.1.18.7 (A:) Epididymal secretory protein E1 (Niemann-Pick C2 protein) {Cow (Bos taurus) [TaxId: 9913]}
Probab=34.91  E-value=13  Score=15.05  Aligned_cols=78  Identities=15%  Similarity=0.190  Sum_probs=52.7

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEE--------E-CC-CCCCCCEEEEEEEEEE--CCCCCCEE
Q ss_conf             58788997179998888557975686389998399376624--------6-47-7389964889886421--77789648
Q T0541            12 PVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQ--------T-VT-SLESENSTNVDFHWTL--DGTANSYT   79 (106)
Q Consensus        12 p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~--------~-v~-~L~~G~s~tv~~~~~~--~~~~G~~t   79 (106)
                      |=.+..|+.+++.+...-......-...+.+.+.|..+-.-        . +. +|.+|+..+..+++..  ..+.+.|+
T Consensus        27 PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gi~ip~p~~~~d~C~~g~~CPl~~G~~~~y~~~~~I~~~~P~~~~~  106 (130)
T d1nepa_          27 PCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLPVKNEYPSIKVV  106 (130)
T ss_dssp             SEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEECCTTSCSSEEE
T ss_pred             CCEEECCCEEEEEEEEECCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHCCEEEE
T ss_conf             97756799789999998576542389999999979993156778764335882775489459999987803663518999


Q ss_pred             EEEEE-CCCCC
Q ss_conf             99997-59995
Q T0541            80 LTVNV-DPENA   89 (106)
Q Consensus        80 i~v~v-D~~n~   89 (106)
                      +.+.+ |..+.
T Consensus       107 v~~~l~d~~~~  117 (130)
T d1nepa_         107 VEWELTDDKNQ  117 (130)
T ss_dssp             EEEEEECTTSC
T ss_pred             EEEEEECCCCC
T ss_conf             99999958999


No 36 
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}
Probab=33.07  E-value=14  Score=14.89  Aligned_cols=25  Identities=12%  Similarity=0.282  Sum_probs=15.4

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCCEEEE
Q ss_conf             4773899648898864217778964899
Q T0541            54 VTSLESENSTNVDFHWTLDGTANSYTLT   81 (106)
Q Consensus        54 v~~L~~G~s~tv~~~~~~~~~~G~~ti~   81 (106)
                      ...+.||++.+++|..  . .+|.|-+.
T Consensus       104 ~~~i~PGet~ty~f~a--~-~pGt~~YH  128 (157)
T d2bw4a1         104 LTQVNPGEETTLRFKA--T-KPGVFVYH  128 (157)
T ss_dssp             GCCBCTTEEEEEEEEC--C-SCEEEEEE
T ss_pred             EEEECCCCEEEEEEEC--C-CCCCCEEE
T ss_conf             6329959977279977--8-98632688


No 37 
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]}
Probab=32.93  E-value=9.3  Score=15.90  Aligned_cols=46  Identities=9%  Similarity=0.144  Sum_probs=24.6

Q ss_pred             EEEEEEEECCCCCCCCEEEEEE-------------ECCEEEEEEECCCCCCCCEEEEEEEEE
Q ss_conf             9998888557975686389998-------------399376624647738996488988642
Q T0541            22 TMTATIENQGNKDSTSFNVSLL-------------VDGIVVDTQTVTSLESENSTNVDFHWT   70 (106)
Q Consensus        22 tv~vtV~N~G~~~a~~~~v~~y-------------~~g~~~~~~~v~~L~~G~s~tv~~~~~   70 (106)
                      +|.++++|.-...   +.+.+.             .++..........++||++.+..|...
T Consensus        69 ~i~V~f~N~~~~~---~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~  127 (180)
T d1sdda1          69 IMKVHFKNKAHKP---LSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS  127 (180)
T ss_dssp             EEEEEEEECSSSC---BCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred             EEEEEEEECCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf             9943999698998---3243434335643345666554888775566428998799999847


No 38 
>d1qbaa2 b.2.2.3 (A:28-200) Bacterial chitobiase, n-terminal domain {Serratia marcescens [TaxId: 615]}
Probab=28.85  E-value=17  Score=14.49  Aligned_cols=52  Identities=10%  Similarity=0.194  Sum_probs=33.3

Q ss_pred             CEEEEEEEEEECCCCCC-CCEEEEEE-----------------ECCEEEEEEE---CCCCCCCCEEEEEEEEE
Q ss_conf             71799988885579756-86389998-----------------3993766246---47738996488988642
Q T0541            19 TVNTMTATIENQGNKDS-TSFNVSLL-----------------VDGIVVDTQT---VTSLESENSTNVDFHWT   70 (106)
Q Consensus        19 ~~~tv~vtV~N~G~~~a-~~~~v~~y-----------------~~g~~~~~~~---v~~L~~G~s~tv~~~~~   70 (106)
                      .-+....+++|.|.... .+..+.|.                 ++|.+-.-.+   -.+|+||++.+++|...
T Consensus        38 ~c~~~~ltL~N~g~~~~~~dW~IyF~s~r~I~~~~~~~f~I~hvnGDl~kitPt~~F~gl~~G~s~~i~f~~~  110 (173)
T d1qbaa2          38 SCNRVLFTLSNDGQAIDGKDWVIYFHSPRQTLRVDNDQFKIAHLTGDLYKLEPTAKFSGFPAGKAVEIPVVAE  110 (173)
T ss_dssp             CEEEEEEEEECCSSCBCCCCCEEEEECSSCEEEESSTTEEEEECSTTEEEEEECTTCCCBCTTCEEEEEEEEE
T ss_pred             CCEEEEEEEECCCCCCCCCCEEEEEECCCEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECC
T ss_conf             5228999997389876789938999756241013688878999559788976766678759999799999814


No 39 
>d1vcaa1 b.1.1.3 (A:91-199) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.13  E-value=19  Score=14.22  Aligned_cols=71  Identities=8%  Similarity=0.083  Sum_probs=43.8

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCC---CCCCCEEEEEEEEEECCCC-C-CEEEEEEE
Q ss_conf             587889971799988885579756863899983993766246477---3899648898864217778-9-64899997
Q T0541            12 PVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTS---LESENSTNVDFHWTLDGTA-N-SYTLTVNV   84 (106)
Q Consensus        12 p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~---L~~G~s~tv~~~~~~~~~~-G-~~ti~v~v   84 (106)
                      +..+..|+.++++..+.+  ...+....+.||.++..+.......   ...+.+.+..+.+.+.... | .++=.|.-
T Consensus        10 ~~~l~~G~~~~l~C~v~~--~~P~~~~~i~W~~g~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~~~D~g~~ltC~a~~   85 (109)
T d1vcaa1          10 SGPLEAGKPITVKCSVAD--VYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKL   85 (109)
T ss_dssp             SSCEETTSCEEEEEEEEE--EBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEE
T ss_pred             CCCCCCCCEEEEEEEECC--CCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCEEEEEEECCCCHHHCCCEEEEEEEC
T ss_conf             777568986997967687--1888852789800682200100100024577511669997668968999599999975


No 40 
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.57  E-value=20  Score=14.16  Aligned_cols=71  Identities=13%  Similarity=0.069  Sum_probs=41.9

Q ss_pred             CEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEE
Q ss_conf             60786602587889971799988885579756863899983993766246477389964889886421777896489999
Q T0541             4 DLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVN   83 (106)
Q Consensus         4 DL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~v~   83 (106)
                      |..+..-.+..+..|+.++++..+.    .......+.||-||..+....       ...++.+.-.-....|.|.-.+.
T Consensus         1 d~Lilq~p~~~V~eG~~v~L~C~~~----~~~~~~~~~w~k~g~~~~~~~-------~~~~l~i~~~~~~dsG~Y~C~a~   69 (89)
T d1f2qa2           1 DWLLLQASAEVVMEGQPLFLRCHGW----RNWDVYKVIYYKDGEALKYWY-------ENHNISITNATVEDSGTYYCTGK   69 (89)
T ss_dssp             SSEEEEESCSEEETTSCEEEEEEEG----GGCCEEEEEEEETTEECCSCC-------CSSEEEESSCCGGGCEEEEEEEE
T ss_pred             CEEEEECCCCEEECCCEEEEEEEEC----CCCCCEEEEEEEEEECCCCCC-------CCCEEEEEEEEEECCCEEEEEEE
T ss_conf             9189968968185899799999955----799980899998310430102-------22127994411406717999999


Q ss_pred             EC
Q ss_conf             75
Q T0541            84 VD   85 (106)
Q Consensus        84 vD   85 (106)
                      -.
T Consensus        70 n~   71 (89)
T d1f2qa2          70 VW   71 (89)
T ss_dssp             ET
T ss_pred             EC
T ss_conf             68


No 41 
>d1nbca_ b.2.2.2 (A:) Cellusomal scaffolding protein A, scaffoldin {Clostridium thermocellum [TaxId: 1515]}
Probab=24.40  E-value=21  Score=14.04  Aligned_cols=41  Identities=7%  Similarity=0.015  Sum_probs=28.0

Q ss_pred             CEEEEEEECCCCCCCCEEEEEEEEEECCCCCCC--CEEEEEEE
Q ss_conf             607866025878899717999888855797568--63899983
Q T0541             4 DLVPVSLTPVTVVPNTVNTMTATIENQGNKDST--SFNVSLLV   44 (106)
Q Consensus         4 DL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~--~~~v~~y~   44 (106)
                      ||.|.-..-......+.+.....|+|.|..+..  ...+|+|.
T Consensus         1 ~l~v~y~n~~~~~~~n~I~~~~~i~N~g~~~i~Lsdlk~RYyf   43 (155)
T d1nbca_           1 NLKVEFYNSNPSDTTNSINPQFKVTNTGSSAIDLSKLTLRYYY   43 (155)
T ss_dssp             CEEEEEEESCCCSEESCBCEEEEEEECSSSCEEGGGEEEEEEE
T ss_pred             CEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEE
T ss_conf             9699997788999877586899989799996103767999999


No 42 
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]}
Probab=23.78  E-value=22  Score=13.98  Aligned_cols=69  Identities=23%  Similarity=0.299  Sum_probs=42.9

Q ss_pred             CCCCCEEEEEEEEEECCCCCCCCEEEEE--------EECCEEEEEEECC--CCCCCCEEEEEEEEEECCCCCCEEEEEEE
Q ss_conf             8899717999888855797568638999--------8399376624647--73899648898864217778964899997
Q T0541            15 VVPNTVNTMTATIENQGNKDSTSFNVSL--------LVDGIVVDTQTVT--SLESENSTNVDFHWTLDGTANSYTLTVNV   84 (106)
Q Consensus        15 ~~~g~~~tv~vtV~N~G~~~a~~~~v~~--------y~~g~~~~~~~v~--~L~~G~s~tv~~~~~~~~~~G~~ti~v~v   84 (106)
                      ..+|+.+  ...+-|.|....  +.+++        -.||..+.-..+.  .|.+||..++-+..  ..+.|.|.+++..
T Consensus        57 v~~g~~~--rlR~iN~~~~~~--~~~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a--~~~~~~Y~ir~~~  130 (181)
T d2q9oa2          57 LTPGKRH--RLRILNTSTENH--FQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDA--SRAPDNYWFNVTF  130 (181)
T ss_dssp             ECTTCEE--EEEEEECCSSCC--EEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEEC--CSCSSEEEEEEEC
T ss_pred             ECCCCEE--EEEEECCCCCCC--EEEEECCCEEEEEEECCEECCCEEECEEEECCCCEEEEEEEC--CCCCCCEEEEEEC
T ss_conf             8899889--998850567731--899977844899984994735468587994378189999957--9998618999821


Q ss_pred             CCCCC
Q ss_conf             59995
Q T0541            85 DPENA   89 (106)
Q Consensus        85 D~~n~   89 (106)
                      +....
T Consensus       131 ~~~~~  135 (181)
T d2q9oa2         131 GGQAA  135 (181)
T ss_dssp             CGGGT
T ss_pred             CCCCC
T ss_conf             56655


No 43 
>d1z52a2 f.8.1.1 (A:85-469) (Pro)aerolysin, pore-forming lobe {Aeromonas hydrophila [TaxId: 644]} SCOP: d1z52b2 d1prea2 d1preb2
Probab=23.31  E-value=22  Score=13.92  Aligned_cols=81  Identities=9%  Similarity=0.128  Sum_probs=43.8

Q ss_pred             EEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCEE
Q ss_conf             79998888557975686389998399376624647738996488988642177789648999975999584121788558
Q T0541            21 NTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVNVDPENAVNEGNESNNTL  100 (106)
Q Consensus        21 ~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~v~vD~~n~v~E~~e~NN~~  100 (106)
                      .+++..++|.+...-....+.|.. .....+.......-.++..+...+.++.. |...+.+.++......+.++.+.+.
T Consensus       114 ~tit~~a~N~tdtpqq~v~vtl~y-~~stsWSKT~Sf~fSe~V~Ik~~f~~p~~-GktevSvef~a~qs~s~tns~s~T~  191 (385)
T d1z52a2         114 KTVVGWAVNDSDTPQSGYDVTLRY-DTATNWSKTNTYGLSEKVTTKNKFKWPLV-GETELSIEIAANQSWASQNGGSTTT  191 (385)
T ss_dssp             EEEEEEEEECSSSCBCCEEEEEEE-EEEEEEEECCSSGGGGTEECSSCEECCCC-TTCCCCCEECTTSCGGGCCEEEEEE
T ss_pred             EEEEEEEEECCCCCCEEEEEEEEE-EEEEEEEEEEEEEEEEEEEEEEEEEECEE-EEEEEEEEECCCEEEEEECCEEEEE
T ss_conf             999999997999863138999999-78874345665424589999821572327-8758999971525786653526999


Q ss_pred             EEE
Q ss_conf             888
Q T0541           101 TAL  103 (106)
Q Consensus       101 t~~  103 (106)
                      +..
T Consensus       192 t~s  194 (385)
T d1z52a2         192 SLS  194 (385)
T ss_dssp             EEE
T ss_pred             EEE
T ss_conf             999


No 44 
>d1edqa1 b.1.18.2 (A:24-132) Chitinase A, N-terminal domain N {Serratia marcescens [TaxId: 615]}
Probab=22.78  E-value=23  Score=13.87  Aligned_cols=40  Identities=18%  Similarity=0.282  Sum_probs=28.8

Q ss_pred             EEEEEEECCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEE
Q ss_conf             38999839937662464773899648898864217778964899997
Q T0541            38 FNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVNV   84 (106)
Q Consensus        38 ~~v~~y~~g~~~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~v~v   84 (106)
                      ....+|.||.++.+....    +++.+.+|..   ..+|.|.+++.+
T Consensus        52 d~~~v~~dg~~V~~g~~~----~~~~~a~f~v---~kgG~y~m~V~L   91 (109)
T d1edqa1          52 TTAKVLLNGKEAWSGPST----GSSGTANFKV---NKGGRYQMQVAL   91 (109)
T ss_dssp             SEEEEEETTEEEEEEECC----SSEEEEEEEE---CSCEEEEEEEEE
T ss_pred             CEEEEEECCEEEEECCCC----CCCEEEEEEE---CCCCEEEEEEEE
T ss_conf             589999999999864687----6730899996---689889999999


No 45 
>d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} SCOP: d1cwva2
Probab=22.64  E-value=23  Score=13.85  Aligned_cols=69  Identities=13%  Similarity=0.119  Sum_probs=41.4

Q ss_pred             CCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEECC
Q ss_conf             889971799988885579756863899983993766246477389964889886421777896489999759
Q T0541            15 VVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVNVDP   86 (106)
Q Consensus        15 ~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~v~vD~   86 (106)
                      ....+..+++++|+-.-....++..|.|..++..........=.....+++.+  .. ..+|.+++.+.++-
T Consensus        14 Adg~d~~~vtatV~D~~gnpv~g~~V~f~~~~~~~~~~~~~~Td~~G~a~~tl--ts-t~aG~~~VtAt~~~   82 (94)
T d1cwva1          14 ANGKTAITVEFTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIAL--TN-TTDGVTVVTAEVEG   82 (94)
T ss_dssp             SSSSSCEEEEEEEECTTSCBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEE--BC-SSCEEEEEEEEETT
T ss_pred             ECCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEECCCEECCCCEEEEEE--EC-CCCCEEEEEEEECC
T ss_conf             38800279999888488991499668899679845860550358986898998--55-64755998888569


No 46 
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=22.53  E-value=9.9  Score=15.74  Aligned_cols=79  Identities=10%  Similarity=0.075  Sum_probs=39.6

Q ss_pred             CCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCC-CCCCCEEEEEEEEEECCCCCCEE
Q ss_conf             99860786602587889971799988885579756863899983993766246477-38996488988642177789648
Q T0541             1 MIPDLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTS-LESENSTNVDFHWTLDGTANSYT   79 (106)
Q Consensus         1 ~lPDL~v~~i~p~~~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~-L~~G~s~tv~~~~~~~~~~G~~t   79 (106)
                      |||++....-.+-....|+.+.+...+..    ..+...+.||-+|..+....... .......++.|.-.-..-.|.|+
T Consensus         2 ~l~~F~~~~~~~v~v~eG~~~~l~C~~~~----~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~   77 (105)
T d1cs6a2           2 FLQEFSAEERDPVKITEGWGVMFTCSPPP----HYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYS   77 (105)
T ss_dssp             EECCCCSSCCCCEEEETTSCEEECCCCCS----EESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEE
T ss_pred             CCCCCCCCCCCCEEEECCCEEEEEEECCC----CCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEE
T ss_conf             47765578999889968994999987037----99888999998504641114520246669987866656503596899


Q ss_pred             EEEE
Q ss_conf             9999
Q T0541            80 LTVN   83 (106)
Q Consensus        80 i~v~   83 (106)
                      -.|.
T Consensus        78 C~a~   81 (105)
T d1cs6a2          78 CFAT   81 (105)
T ss_dssp             EEEE
T ss_pred             EEEE
T ss_conf             9999


No 47 
>d1qxpa3 b.14.1.1 (A:356-514) Calpain large subunit, middle domain (domain III) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}
Probab=22.18  E-value=23  Score=13.80  Aligned_cols=38  Identities=11%  Similarity=0.094  Sum_probs=25.1

Q ss_pred             CCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEECC
Q ss_conf             738996488988642177789648999975999584121
Q T0541            56 SLESENSTNVDFHWTLDGTANSYTLTVNVDPENAVNEGN   94 (106)
Q Consensus        56 ~L~~G~s~tv~~~~~~~~~~G~~ti~v~vD~~n~v~E~~   94 (106)
                      .|+||...-+..++.+ ...|.|.|++.-+-...+.|+|
T Consensus       122 ~l~pG~Y~IVPsT~~p-~~~g~F~LrVfs~~~~~~~eld  159 (159)
T d1qxpa3         122 RLPPGEYIVVPSTFEP-NKEGDFLLRFFSEKKAGTQELD  159 (159)
T ss_dssp             ECCSEEEEEEEEESSS-SCCEEEEEEEEESSCEEECCBC
T ss_pred             EECCCCEEEEEEECCC-CCEEEEEEEEEECCCCCEEECC
T ss_conf             9689989999666589-9887379999989999817388


No 48 
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=21.15  E-value=25  Score=13.68  Aligned_cols=56  Identities=13%  Similarity=0.127  Sum_probs=28.0

Q ss_pred             CCCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEE
Q ss_conf             8899717999888855797568638999839937662464773899648898864217778964899
Q T0541            15 VVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLT   81 (106)
Q Consensus        15 ~~~g~~~tv~vtV~N~G~~~a~~~~v~~y~~g~~~~~~~v~~L~~G~s~tv~~~~~~~~~~G~~ti~   81 (106)
                      +..|+.+++  .++|.+..  ......|.+.+.-+..    .+.||++.+++|+.  . .+|.|.+.
T Consensus        56 V~~Gd~V~~--~ltN~d~~--~~v~H~~~i~~~~~~~----~~~PG~~~~~~F~a--~-~~G~y~~~  111 (132)
T d1fwxa1          56 VKEGDEVTV--IVTNLDEI--DDLTHGFTMGNYGVAM----EIGPQMTSSVTFVA--A-NPGVYWYY  111 (132)
T ss_dssp             EETTCEEEE--EEEECCCS--TTCCEEEEETTTTEEE----EECTTCEEEEEEEC--C-SCEEEEEE
T ss_pred             ECCCCEEEE--EEECCCCC--CCCEEEECHHHHCCCC----CCCCCEEEEEEEEC--C-CCEEEEEE
T ss_conf             838987999--99848877--6406762001113243----45799799999957--9-98699998


No 49 
>d1g0da1 b.1.18.9 (A:6-140) Transglutaminase N-terminal domain {Red sea bream (Chrysophrys major) [TaxId: 143350]}
Probab=20.17  E-value=26  Score=13.57  Aligned_cols=29  Identities=17%  Similarity=0.251  Sum_probs=21.8

Q ss_pred             CCCCEEEEEEEEEECCCCCCEEEEEEECC
Q ss_conf             89964889886421777896489999759
Q T0541            58 ESENSTNVDFHWTLDGTANSYTLTVNVDP   86 (106)
Q Consensus        58 ~~G~s~tv~~~~~~~~~~G~~ti~v~vD~   86 (106)
                      ..+.+.++++.-++.+.-|.|.+.+.+-.
T Consensus        83 ~~~~~v~vsV~spa~A~VG~y~L~v~~~~  111 (135)
T d1g0da1          83 GAQDEILLTLHSPANAVIGHYRLAVLVMS  111 (135)
T ss_dssp             ECSSEEEEEEECCTTCCCEEEEEEEEEEC
T ss_pred             CCCCEEEEEEECCCCCEEEEEEEEEEEEE
T ss_conf             37997999996899970778899999983


Done!