Query T0542 NH3-DEPENDENT NAD+ SYNTHETASE, STREPTOMYCES AVERMITILIS, 590 residues
Match_columns 590
No_of_seqs 250 out of 3532
Neff 7.5
Searched_HMMs 15564
Date Fri May 21 18:08:02 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0542.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0542.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kqpa_ c.26.2.1 (A:) NH3-depe 100.0 0 0 452.2 22.8 240 301-574 14-271 (271)
2 d1xnga1 c.26.2.1 (A:3-257) NH3 100.0 0 0 425.6 26.4 246 306-564 3-254 (255)
3 d1wxia1 c.26.2.1 (A:2-275) NH3 100.0 0 0 424.1 20.6 234 302-563 15-267 (274)
4 d1f89a_ d.160.1.1 (A:) hypothe 100.0 0 0 359.6 22.0 261 1-277 6-280 (281)
5 d1j31a_ d.160.1.2 (A:) Hypothe 100.0 0 0 348.9 25.2 250 5-280 2-259 (262)
6 d1uf5a_ d.160.1.2 (A:) N-carba 100.0 0 0 345.8 26.0 266 2-280 1-296 (303)
7 d1f89a_ d.160.1.1 (A:) hypothe 100.0 0 0 337.7 22.3 261 1-277 6-280 (281)
8 d1emsa2 d.160.1.1 (A:10-280) N 100.0 0 0 323.2 24.4 259 1-273 1-268 (271)
9 d1gpma1 c.26.2.1 (A:208-404) G 99.8 1.2E-18 7.5E-23 139.1 16.6 175 306-496 3-197 (197)
10 d2c5sa1 c.26.2.6 (A:174-391) T 99.2 5.3E-10 3.4E-14 82.0 15.1 145 325-473 2-159 (218)
11 d1wy5a1 c.26.2.5 (A:1-216) Til 98.9 8.2E-08 5.3E-12 67.6 15.8 162 306-473 4-185 (216)
12 d1ni5a1 c.26.2.5 (A:0-226) tRN 98.7 2.1E-07 1.4E-11 64.9 12.0 136 325-473 12-172 (227)
13 d1ct9a1 c.26.2.1 (A:193-516) A 98.7 7.6E-07 4.9E-11 61.2 14.5 137 306-446 16-168 (169)
14 d1jgta1 c.26.2.1 (A:210-508) b 98.7 6.1E-07 3.9E-11 61.8 13.3 132 306-444 14-149 (299)
15 d1q15a1 c.26.2.1 (A:206-501) b 98.5 4.1E-06 2.6E-10 56.4 14.3 135 306-445 11-151 (296)
16 d2pg3a1 c.26.2.1 (A:1-230) Que 98.4 3.1E-06 2E-10 57.2 10.6 146 326-473 1-176 (230)
17 d1j20a1 c.26.2.1 (A:1-165) Arg 98.4 2.7E-06 1.7E-10 57.6 10.2 143 328-473 2-161 (165)
18 d1k92a1 c.26.2.1 (A:1-188) Arg 98.2 3.9E-05 2.5E-09 49.9 13.2 144 327-473 11-179 (188)
19 d1ct9a1 c.26.2.1 (A:193-516) A 98.2 0.00012 7.8E-09 46.7 15.3 136 305-447 15-169 (324)
20 d1zuna1 c.26.2.2 (A:1-211) Sul 98.1 0.00021 1.3E-08 45.1 16.1 145 327-473 27-201 (211)
21 d1vl2a1 c.26.2.1 (A:2-169) Arg 98.1 6.7E-05 4.3E-09 48.4 12.9 144 327-473 2-165 (168)
22 d1sura_ c.26.2.2 (A:) Phosphoa 97.3 0.0028 1.8E-07 37.7 11.4 143 327-473 45-197 (215)
23 d2d13a1 c.26.2.1 (A:2-227) Hyp 97.0 0.0024 1.6E-07 38.1 8.1 65 325-391 2-72 (226)
24 d1vbka1 c.26.2.6 (A:176-307) H 96.5 0.0067 4.3E-07 35.2 7.5 121 327-473 5-131 (132)
25 d1uf3a_ d.159.1.6 (A:) Hypothe 83.7 0.36 2.3E-05 23.8 2.6 73 1-93 1-74 (228)
26 d1s3la_ d.159.1.7 (A:) Putativ 81.8 0.66 4.2E-05 22.1 3.3 34 5-44 1-34 (165)
27 d1su1a_ d.159.1.7 (A:) Phospho 72.6 1.4 8.7E-05 20.0 2.8 34 5-44 2-35 (184)
28 d3ck2a1 d.159.1.7 (A:1-173) Un 68.8 2.6 0.00017 18.1 3.5 35 1-43 1-35 (173)
29 d1q7ra_ c.23.16.1 (A:) Hypothe 67.5 1.6 0.0001 19.5 2.2 26 1-33 3-28 (202)
30 d1kica_ c.70.1.1 (A:) Inosine- 64.2 3.7 0.00024 17.1 6.3 74 315-391 119-212 (327)
31 d2masa_ c.70.1.1 (A:) Inosine- 64.1 3.7 0.00024 17.1 7.2 21 370-391 172-192 (313)
32 d1odfa_ c.37.1.6 (A:) Hypothet 60.5 4.3 0.00028 16.7 6.8 69 309-380 8-83 (286)
33 d1ub7a1 c.95.1.2 (A:2-173) Ket 54.7 4.6 0.0003 16.5 2.7 119 321-454 32-161 (172)
34 d2gnpa1 c.124.1.8 (A:56-317) T 54.3 5.5 0.00035 16.0 9.4 135 306-470 33-180 (262)
35 d1q8fa_ c.70.1.1 (A:) Pyrimidi 53.0 5.7 0.00037 15.9 7.0 73 316-391 105-189 (308)
36 d1kica_ c.70.1.1 (A:) Inosine- 44.8 7.6 0.00049 15.1 6.2 75 314-391 118-212 (327)
37 d2yvta1 d.159.1.6 (A:4-260) Un 38.5 7 0.00045 15.3 1.5 36 3-44 1-36 (257)
38 d1ii7a_ d.159.1.4 (A:) Mre11 { 30.6 13 0.00081 13.6 5.6 62 21-92 24-85 (333)
39 d1sq5a_ c.37.1.6 (A:) Pantothe 27.2 14 0.00093 13.2 6.1 77 316-394 67-150 (308)
40 d1deka_ c.37.1.1 (A:) Deoxynuc 27.1 15 0.00093 13.2 2.1 22 330-351 3-26 (241)
41 d2o0ma1 c.124.1.8 (A:95-341) T 26.5 15 0.00096 13.1 6.8 119 306-438 26-154 (247)
42 d2ddra1 d.151.1.3 (A:7-305) Sp 26.5 15 0.00096 13.1 1.6 25 23-47 25-49 (299)
43 d2cmda1 c.2.1.5 (A:1-145) Mala 26.2 15 0.00097 13.1 5.5 45 313-357 97-145 (145)
44 d1wdua_ d.151.1.1 (A:) Endonuc 25.6 11 0.00069 14.1 0.7 40 4-50 2-41 (228)
45 d1gpja3 d.58.39.1 (A:1-143) Gl 25.3 6.1 0.00039 15.7 -0.6 20 422-441 36-55 (143)
46 d2ch5a2 c.55.1.5 (A:1-117) N-a 23.8 17 0.0011 12.8 5.0 36 306-342 42-83 (117)
47 d1uj2a_ c.37.1.6 (A:) Uridine- 23.1 17 0.0011 12.7 4.2 11 329-339 3-13 (213)
48 d1o60a_ c.1.10.4 (A:) 3-deoxy- 23.0 17 0.0011 12.7 3.9 32 16-47 27-58 (281)
49 d1vhta_ c.37.1.1 (A:) Dephosph 22.5 18 0.0011 12.7 2.3 24 328-352 3-28 (208)
50 d1dw0a_ a.3.1.1 (A:) SHP, an o 22.0 18 0.0012 12.6 1.4 24 536-559 76-99 (112)
51 d1gpja3 d.58.39.1 (A:1-143) Gl 21.9 7.7 0.0005 15.0 -0.6 21 420-440 34-54 (143)
52 d1efpb_ c.26.2.3 (B:) Small, b 21.9 18 0.0012 12.6 2.4 10 353-362 219-228 (246)
53 d2okga1 c.124.1.8 (A:89-338) C 21.0 19 0.0012 12.5 7.7 120 308-438 34-158 (250)
54 d1rz3a_ c.37.1.6 (A:) Hypothet 20.5 19 0.0012 12.4 3.3 37 327-364 21-62 (198)
No 1
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=0 Score=452.22 Aligned_cols=240 Identities=26% Similarity=0.350 Sum_probs=214.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCC-------CCCCEEEEECCCCCCCHHHHHHH
Q ss_conf 44670557889999999999984156834897058836899999998516-------95517988778889828779999
Q T0542 301 DRLDADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDAL-------GAQNVYGVSMPSKYSSDHSKGDA 373 (590)
Q Consensus 301 ~~~~~~e~~~~a~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~~a~-------g~~~v~~~~mp~~~~s~~~~~~a 373 (590)
+..+..+++ +.++.|||||++++|++|+||||||||||||+|+||++|+ |+++|++++||.. +..+.++|
T Consensus 14 p~~d~~e~i-~~~v~~lrdy~~ksg~~gvvvglSGGIDSAv~a~L~~~A~~~~~~~~g~~~v~~v~mP~~--~~~~~~~a 90 (271)
T d1kqpa_ 14 PSIDPKQEI-EDRVNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHG--TQQDEDDA 90 (271)
T ss_dssp SSCCHHHHH-HHHHHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSS--SCTTHHHH
T ss_pred CCCCHHHHH-HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC--CCCHHHHH
T ss_conf 999989999-999999999999949981999798888899999999999998877237852235656744--43123369
Q ss_pred HHHHHHCCCCEE-EECHHHHHHHHHHHCC------CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHH
Q ss_conf 999997198479-8345999999998618------357406655565789999999976197898748667775520333
Q T0542 374 AELARRTGLNFR-TVSIEPMFDAYMASLG------LTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELAVGYSTL 446 (590)
Q Consensus 374 ~~la~~lg~~~~-~i~i~~~~~~~~~~~~------~~~~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~sE~~lG~~t~ 446 (590)
+.+++.+++.+. +++|.+++++|...+. ..+++.+|+|||+||.+||++||..|++|+|||||||.++||+|+
T Consensus 91 ~~~~~~~~~~~~~~i~I~~~~~~~~~~~~~~~~~~~~~~~~~NiqaRiR~~~Ly~~An~~g~lvlgTgNksE~~~Gy~Tk 170 (271)
T d1kqpa_ 91 QLALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTK 170 (271)
T ss_dssp HHHHHHHCCSEEEECCCHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHTTTCSCT
T ss_pred HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHH
T ss_conf 99998725554047752078776788877765214331000121000352036776751498667886326550014666
Q ss_pred CCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC---CCCCCCCCC-CHHHHHHHHHHHH
Q ss_conf 067711122306887889999999861002111332135377725888866678---888600257-8668999999998
Q T0542 447 YGDSVGAYGPIKDVYKTSIFRLAEWRNRAAAERGQTPPIPEASITKPPSAELRP---GQVDTDSLP-DYPVLDAILELYV 522 (590)
Q Consensus 447 ~Gd~~~~~~p~~~l~Kt~v~~la~~~~~~~~~~~~~~~~p~~i~~~~psaeL~~---~q~de~~lg-~y~~lD~~l~~~~ 522 (590)
|||+++|++||+||||++|++||+|++ +|++|++|+||||||+ +|+|||+|| ||+.||.||+.
T Consensus 171 yGD~~~di~Pi~dL~K~eV~~La~~lg-----------ip~~ii~k~PSaeL~~~~~~q~DE~~lg~~Y~~lD~~l~~-- 237 (271)
T d1kqpa_ 171 YGDGGADLLPLTGLTKRQGRTLLKELG-----------APERLYLKEPTADLLDEKPQQSDETELGISYDEIDDYLEG-- 237 (271)
T ss_dssp TTTTCCSBCTTTTCCHHHHHHHHHHTT-----------CCTHHHHSCCBCCCCSSSTTCBHHHHHSSCHHHHHHHHTT--
T ss_pred HHHCCCHHCCCCCCCHHHHHHHHHHHH-----------HCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHC--
T ss_conf 432110012363647787999987532-----------0111113677600135789997877609999999999855--
Q ss_pred HCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCC
Q ss_conf 5689879998617899899999999985156686378943025524774334
Q T0542 523 DRDTGADAIVAAGYDRELVVKTLRMVDTAEYKRRQYPPGTKISAKGFGKDRR 574 (590)
Q Consensus 523 ~~~~~~~~i~~~~~~~~~v~~~~~~~~~~~~KR~~~pp~~~is~~s~~~~~r 574 (590)
...+.+.++++.+++.+|||||+ +||.+ |+..||
T Consensus 238 -----------~~~~~~~~~~i~~~~~~~~hKR~-~P~~~------f~~~~~ 271 (271)
T d1kqpa_ 238 -----------KEVSAKVSEALEKRYSMTEHKRQ-VPASM------FDDWWK 271 (271)
T ss_dssp -----------CCCCHHHHHHHHHHHHHTGGGGS-SCBCT------TCCTTC
T ss_pred -----------CCCCHHHHHHHHHHHHHHHHCCC-CCCCC------CCCCCC
T ss_conf -----------67889999999999998876237-99986------564128
No 2
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]}
Probab=100.00 E-value=0 Score=425.63 Aligned_cols=246 Identities=31% Similarity=0.467 Sum_probs=228.9
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 55788999999999998415683489705883689999999851695517988778889828779999999997198479
Q T0542 306 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFR 385 (590)
Q Consensus 306 ~e~~~~a~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~ 385 (590)
.+.+...++.+|++|++++|++++|||+||||||||+|+||.+++ ++||+|++||+..+++.+.++|+.+|+.||+++.
T Consensus 3 ~~~~~~~l~~~l~~~~~~~G~k~vvvglSGGVDSsv~A~L~~~a~-~~~v~~v~mp~~~~~~~~~~~A~~la~~lgi~~~ 81 (255)
T d1xnga1 3 YQKLIVYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPSSVSMPENKTDALNLCEKFSIPYT 81 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHH-GGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH-HHHCCHHCCCCHHCCHHHHHHHHHHHHHHHHCCH
T ss_conf 899999999999999998299829997879889999999999975-6512111275121452558999999998540012
Q ss_pred EECHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHH
Q ss_conf 834599999999861835-7406655565789999999976197898748667775520333067711122306887889
Q T0542 386 TVSIEPMFDAYMASLGLT-GLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTS 464 (590)
Q Consensus 386 ~i~i~~~~~~~~~~~~~~-~~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~sE~~lG~~t~~Gd~~~~~~p~~~l~Kt~ 464 (590)
+++++...+.+...+... ....+|+|+|+||.++|++|+..|++++||+|++|.++||+|+|||++++++||+||+|++
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~n~~ar~r~~~l~~~a~~~~~~v~gt~n~~e~~~g~~t~~gd~~~~l~Pl~dL~K~e 161 (255)
T d1xnga1 82 EYSIAPYDAIFSSHFKDASLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTE 161 (255)
T ss_dssp ECCCHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHHHTCSCTTTTTCCSEETTTTSCHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHCCCHHHHCCCCHHH
T ss_conf 35567777665421221124567888999828889988764087567873188786064400434213101312769999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHH----HCCCCHHHHHHCCCCHH
Q ss_conf 999999861002111332135377725888866678888600257-8668999999998----56898799986178998
Q T0542 465 IFRLAEWRNRAAAERGQTPPIPEASITKPPSAELRPGQVDTDSLP-DYPVLDAILELYV----DRDTGADAIVAAGYDRE 539 (590)
Q Consensus 465 v~~la~~~~~~~~~~~~~~~~p~~i~~~~psaeL~~~q~de~~lg-~y~~lD~~l~~~~----~~~~~~~~i~~~~~~~~ 539 (590)
||+||+++| +|++|++|||||+||++|+||++|| ||+++|.+|+.+. .+..+.+++.+.+|+++
T Consensus 162 Vr~LA~~lg-----------lP~~i~~k~ps~~L~~~q~de~~lg~~Y~~lD~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
T d1xnga1 162 VYELARRLN-----------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDIEALFQTKPIDTETLAQLGYDEI 230 (255)
T ss_dssp HHHHHHHTT-----------CCHHHHTSCCCCCSSTTCCHHHHHSSCHHHHHHHHHHHHHHSSSSCCCHHHHHHTTCCHH
T ss_pred HHHHHHHCC-----------CCHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHH
T ss_conf 999999829-----------956653189995302366747661897689999999877511235688999988399999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 9999999998515668637894302
Q T0542 540 LVVKTLRMVDTAEYKRRQYPPGTKI 564 (590)
Q Consensus 540 ~v~~~~~~~~~~~~KR~~~pp~~~i 564 (590)
.|++|.+++.+|||||+ +||.++.
T Consensus 231 ~v~~i~~~~~~~~~Kr~-~p~~~~~ 254 (255)
T d1xnga1 231 LVKNITSRIQKNAFKLE-LPAIAKR 254 (255)
T ss_dssp HHHHHHHHHHHTGGGGS-CCEECCC
T ss_pred HHHHHHHHHHHHHHCCC-CCCCCCC
T ss_conf 99999999997076265-7888688
No 3
>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=424.11 Aligned_cols=234 Identities=25% Similarity=0.312 Sum_probs=204.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCC-CCCEEEECCCCHHHHHHHHHHHHCCCCCC---------EEEEECCCCCCCHHHHH
Q ss_conf 467055788999999999998415-68348970588368999999985169551---------79887788898287799
Q T0542 302 RLDADEEVYSALVVGLRAYVAKNG-FRSVLIGLSGGIDSALVAAIACDALGAQN---------VYGVSMPSKYSSDHSKG 371 (590)
Q Consensus 302 ~~~~~e~~~~a~~~~l~d~~~~~g-~~~~viglSGGiDS~~~~~la~~a~g~~~---------v~~~~mp~~~~s~~~~~ 371 (590)
..+.++++ +.++.+|+||+++++ .+++||||||||||||+|+||++|+|+++ ++++.||...+++ ..+
T Consensus 15 ~~~~ee~i-~~~v~~L~dy~~k~~~~k~vVvGlSGGIDSav~A~L~~~Alg~~~v~~g~~~~~~i~v~mp~~~~~~-~~d 92 (274)
T d1wxia1 15 QINAEEEI-RRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQAD-EQD 92 (274)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSCTT-HHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCH-HHH
T ss_conf 99989999-9999999999998399985999897878899999999999998766305555228997468866640-779
Q ss_pred HHHHHHHHCCCCEEEECHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHH
Q ss_conf 999999971984798345999999998618-----357406655565789999999976197898748667775520333
Q T0542 372 DAAELARRTGLNFRTVSIEPMFDAYMASLG-----LTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELAVGYSTL 446 (590)
Q Consensus 372 ~a~~la~~lg~~~~~i~i~~~~~~~~~~~~-----~~~~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~sE~~lG~~t~ 446 (590)
.+..++..+++.+.+++|++++.++...+. ..+++.+|+|||+||.+||++||..|++|+||||+||.++||+|+
T Consensus 93 ~~~~~~~~~~~~~~~i~i~~~~~~~~~~l~~~~~~~~~~~~~N~~aRiR~~~ly~~A~~~~~lVlgTgNksE~~~Gy~Tk 172 (274)
T d1wxia1 93 CQDAIAFIQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAITGFFTK 172 (274)
T ss_dssp HHHHHHHHCCSEEEECCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHHTTTCSCT
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999864076210013315788898764201345674100104578899889999872398678997744554654230
Q ss_pred CCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCC---CCCCCCC-CHHHHHHHHHHHH
Q ss_conf 06771112230688788999999986100211133213537772588886667888---8600257-8668999999998
Q T0542 447 YGDSVGAYGPIKDVYKTSIFRLAEWRNRAAAERGQTPPIPEASITKPPSAELRPGQ---VDTDSLP-DYPVLDAILELYV 522 (590)
Q Consensus 447 ~Gd~~~~~~p~~~l~Kt~v~~la~~~~~~~~~~~~~~~~p~~i~~~~psaeL~~~q---~de~~lg-~y~~lD~~l~~~~ 522 (590)
|||++++++||++|||++||+||+|++ +|++|++|+||||||++| +||++|| ||+.+|.+|+
T Consensus 173 yGD~~~di~Pl~~L~K~eV~~La~~l~-----------iP~~Ii~k~Psa~L~~~q~~~~DE~~lG~~Y~~lD~~l~--- 238 (274)
T d1wxia1 173 YGDGGTDINPLYRLNKRQGKQLLAALA-----------CPEHLYKKAPTADLEDDRPSLPDEVALGVTYDNIDDYLE--- 238 (274)
T ss_dssp TTTTCCSBCTTTTCCHHHHHHHHHHTT-----------CCGGGTSCC-------------CHHHHSSCHHHHHHHHT---
T ss_pred CCCCCHHHHHHCCCCHHHHHHHHHHHH-----------HCCCCEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHH---
T ss_conf 245422276402661688999998776-----------410001047887543688899898885989999999997---
Q ss_pred HCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 56898799986178998999999999851566863789430
Q T0542 523 DRDTGADAIVAAGYDRELVVKTLRMVDTAEYKRRQYPPGTK 563 (590)
Q Consensus 523 ~~~~~~~~i~~~~~~~~~v~~~~~~~~~~~~KR~~~pp~~~ 563 (590)
..+.+++.++++.+++.+|+|||+ ||.+.
T Consensus 239 ----------~~~~~~~~~~~i~~~~~~~~~KR~--~P~~~ 267 (274)
T d1wxia1 239 ----------GKNVPQQVARTIENWYLKTEHKRR--PPITV 267 (274)
T ss_dssp ----------TCCCCHHHHHHHHHHHHHTGGGGS--SCCCT
T ss_pred ----------CCCCCHHHHHHHHHHHHHHHHCCC--CCCCC
T ss_conf ----------179999999999999998774638--99998
No 4
>d1f89a_ d.160.1.1 (A:) hypothetical protein yl85 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} SCOP: d1emsa2
Probab=100.00 E-value=0 Score=359.55 Aligned_cols=261 Identities=21% Similarity=0.227 Sum_probs=219.1
Q ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC--CCCEEEECCCCCCCCCHHHHHHHHHHHH-----HHHHHHHHH
Q ss_conf 998458999960674168899999999999999967--9969982640037888123331068899-----999999999
Q T0542 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQ--GAHLVAFPEMALTGYPVEDLALRSSFVE-----ASRTALREL 73 (590)
Q Consensus 1 Ms~~mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~--gadLVVfPEl~ltGY~~~Dl~~~~~~~~-----~~~~~l~~l 73 (590)
|+++||||++|+++..+|+++|++++.+++++|.++ |+|||||||++++||++.+......+++ ...+.+.++
T Consensus 6 m~~~lrva~vQ~~~~~~~~~~n~~~~~~~i~~a~~~~~gadliv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (281)
T d1f89a_ 6 LSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNL 85 (281)
T ss_dssp BSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 16662389996168845888999999999999997068977998131431668812468899886211587679999998
Q ss_pred HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEE-CCEEEEEECCEEC-----CCCCCCCCHHHCCCCCC
Q ss_conf 99865201088189983211035543344457882388999981-8817998732770-----79876430122016996
Q T0542 74 AARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHL-----PNYGVFDEFRYFVPGDT 147 (590)
Q Consensus 74 a~~~~~~~~~~i~ivvG~~~~~~~~~~~~~~~~g~lyNsa~vi~-~G~ii~~y~K~~L-----p~~~~~~E~r~f~~G~~ 147 (590)
++ ..++.+++|...... ..++++||++++++ +|+++++|+|+|| |++..|.|++||.||+.
T Consensus 86 A~------~~~~~ii~G~~~~~~-------~~~~~~yNsa~~i~~~G~i~~~y~K~~L~~~~~p~~~~~~E~~~f~~G~~ 152 (281)
T d1f89a_ 86 AN------KFKIILVGGTIPELD-------PKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEK 152 (281)
T ss_dssp HH------HSSCEEECCCEEEEC-------TTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCC
T ss_pred HH------HCCCEEECCEEEECC-------CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 76------258333033012012-------45773133332013552000001131003310146565443245420100
Q ss_pred CCEEEECCEEEEEEEEHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC-CCC
Q ss_conf 1068867857885620234144189999996379789983278765783899999999999860726445631278-887
Q T0542 148 MPIVRLHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGG-QDE 226 (590)
Q Consensus 148 ~~v~~~~g~riGi~IC~D~w~~~~~~~~la~~Gadlii~psasp~~~~~~~~r~~~~~~rA~e~~~~vv~aN~vG~-e~~ 226 (590)
..+|+++++|+|++||||.|| ++..+.++.+||+||++|+++++..++ ..|+...++||.||++|++++|++|. ++.
T Consensus 153 ~~v~~~~~~kig~~IC~D~~f-pe~~r~~~~~ga~ii~~ps~~~~~~~~-~~~~~~~~arA~en~~~vv~~n~~g~~~~~ 230 (281)
T d1f89a_ 153 STTIDTKYGKFGVGICYDMRF-PELAMLSARKGAFAMIYPSAFNTVTGP-LHWHLLARSRAVDNQVYVMLCSPARNLQSS 230 (281)
T ss_dssp CEEEEETTEEEEECCGGGGGC-HHHHHHHHHTTEEEEEEECCCBTTHHH-HHHHHHHHHHHHHHTSEEEEECCCCCTTSS
T ss_pred CCCCCCCCCCCCCEECCCHHH-HHHHHHHHHCCCCEEEECCCCCCCCCC-HHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 110124776300001120134-578999963584069740335554420-124678888876248533056515678876
Q ss_pred EEEECCCEEECCCCCEEECCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCC
Q ss_conf 478467278847883432178998647999862467651145554223443
Q T0542 227 LVFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAAEAEPPTGVVDDGLR 277 (590)
Q Consensus 227 ~vf~G~S~Iidp~G~ila~~~~f~e~il~~diDl~~~~~~r~~~~~~~~~~ 277 (590)
..|.|+|+|++|+|+++++++. +|+++++|||++.++..|++.++..++|
T Consensus 231 ~~~~G~S~iv~p~G~vl~~~~~-~e~~~~a~id~~~~~~~r~~~~~l~~rr 280 (281)
T d1f89a_ 231 YHAYGHSIVVDPRGKIVAEAGE-GEEIIYAELDPEVIESFRQAVPLTKQRR 280 (281)
T ss_dssp SCBCCCCEEECTTSCEEEECCS-SSEEEEEEECHHHHHHHHHHSCCCCCCC
T ss_pred EEECCCEEEECCCCCEEEECCC-CCEEEEEEECHHHHHHHHHHCCHHHCCC
T ss_conf 2430524898478767763589-9708999818799999998578101478
No 5
>d1j31a_ d.160.1.2 (A:) Hypothetical protein PH0642 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=100.00 E-value=0 Score=348.94 Aligned_cols=250 Identities=22% Similarity=0.253 Sum_probs=210.4
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
Q ss_conf 58999960674168899999999999999967996998264003788812333106889-----9999999999998652
Q T0542 5 LRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFV-----EASRTALRELAARLAE 79 (590)
Q Consensus 5 mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~gadLVVfPEl~ltGY~~~Dl~~~~~~~-----~~~~~~l~~la~~~~~ 79 (590)
||||++|++|.++|+++|++++++++++|+++|||||||||+++|||++.+......+. ....+.+.+++++
T Consensus 2 ~ria~~Q~~~~~~d~e~nl~~i~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~--- 78 (262)
T d1j31a_ 2 VKVGYIQMEPKILELDKNYSKAEKLIKEASKEGAKLVVLPELFDTGYNFESREEVFDVAQQIPEGETTTFLMELARE--- 78 (262)
T ss_dssp EEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSSHHHHHTTCBCTTTSHHHHHHHHHHHH---
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHC---
T ss_conf 79999978998789999999999999999988998999488654578602356765433201468999999985312---
Q ss_pred HCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCEECCCCCCCCCHHHCCCCCC-CCEEEECCEEE
Q ss_conf 01088189983211035543344457882388999981881799873277079876430122016996-10688678578
Q T0542 80 EGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLHRGRVALTFAKHHLPNYGVFDEFRYFVPGDT-MPIVRLHGVDI 158 (590)
Q Consensus 80 ~~~~~i~ivvG~~~~~~~~~~~~~~~~g~lyNsa~vi~~G~ii~~y~K~~Lp~~~~~~E~r~f~~G~~-~~v~~~~g~ri 158 (590)
.++.+++|.++.. ++++||+++++.+|++++.|+|+||+. .|.+||.+|+. +.+|+++++||
T Consensus 79 ---~~i~i~~g~~~~~----------~~~~~n~~~~i~~g~~~~~y~K~~l~~----~e~~~~~~G~~~~~v~~~~~~~i 141 (262)
T d1j31a_ 79 ---LGLYIVAGTAEKS----------GNYLYNSAVVVGPRGYIGKYRKIHLFY----REKVFFEPGDLGFKVFDIGFAKV 141 (262)
T ss_dssp ---HTCEEEEEEEEEE----------TTEEEEEEEEEETTEEEEEEECSSCCT----THHHHCCCCCSCSCEEECSSCEE
T ss_pred ---CCCEEEEEEEECC----------CCCCCCCCEEEEEEEEEEEEEEEECCC----CCCEEECCCCCCCEEEEECCCEE
T ss_conf ---6824775431000----------123454306998522799986565576----67246778998755899689569
Q ss_pred EEEEEHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCEEECC
Q ss_conf 85620234144189999996379789983278765783899999999999860726445631278887478467278847
Q T0542 159 ALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDR 238 (590)
Q Consensus 159 Gi~IC~D~w~~~~~~~~la~~Gadlii~psasp~~~~~~~~r~~~~~~rA~e~~~~vv~aN~vG~e~~~vf~G~S~Iidp 238 (590)
|++||+|.|+ ++..+.++.+||+++++|+++.+.. |....++||.||++|++++|++|.+++..|.|+|+|++|
T Consensus 142 g~~IC~D~~~-pe~~~~~~~~ga~lil~p~~~~~~~-----~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~i~~p 215 (262)
T d1j31a_ 142 GVMICFDWFF-PESARTLALKGAEIIAHPANLVMPY-----APRAMPIRALENRVYTITADRVGEERGLKFIGKSLIASP 215 (262)
T ss_dssp EECCGGGGGS-HHHHHHHHHTTCSEEEEECCCCSSC-----HHHHHHHHHHHHTCEEEEECCCSEETTEECCCCCEEECT
T ss_pred EEEEEHHHHH-HHHHHHHHHHCCCCCCCCCCCCCCC-----CHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEC
T ss_conf 9998545642-3889988874033456773334642-----046665565406432899723554588522678889939
Q ss_pred CCCEEECCCCCCCCEEEEEEEHHHHHHCCCC--CCCCCCCCCCC
Q ss_conf 8834321789986479998624676511455--54223443211
Q T0542 239 DGEVVARAPQFSEGCVVLDLDLPAAEAEPPT--GVVDDGLRIDR 280 (590)
Q Consensus 239 ~G~ila~~~~f~e~il~~diDl~~~~~~r~~--~~~~~~~~~~~ 280 (590)
+|+++++++.++|+++++|+|++.++..|.. .....++|.+.
T Consensus 216 ~G~~l~~~~~~~e~i~~a~iDl~~~~~~r~~~~~~~~~~rr~d~ 259 (262)
T d1j31a_ 216 KAEVLSIASETEEEIGVVEIDLNLARNKRLNDMNDIFKDRREEY 259 (262)
T ss_dssp TSCEEEECCSSCCEEEEEEECHHHHHCCEEETTEETTTTCCGGG
T ss_pred CCCEEEECCCCCCEEEEEEEECHHHHHHHHHCCCCCHHHCCCCC
T ss_conf 99899876899877999999817989998745387055487024
No 6
>d1uf5a_ d.160.1.2 (A:) N-carbamoyl-D-aminoacid amidohydrolase {Agrobacterium sp. [TaxId: 361]}
Probab=100.00 E-value=0 Score=345.77 Aligned_cols=266 Identities=20% Similarity=0.238 Sum_probs=215.3
Q ss_pred CCCEEEEEEECCCCC--CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHH---------HHHHH
Q ss_conf 984589999606741--6889999999999999996799699826400378881233310688999---------99999
Q T0542 2 SLQLRLALNQIDSTV--GDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFVEA---------SRTAL 70 (590)
Q Consensus 2 s~~mkIAlaQ~~~~~--gD~~~N~~ki~~~i~~A~~~gadLVVfPEl~ltGY~~~Dl~~~~~~~~~---------~~~~l 70 (590)
|+|||||++|++|+. .|.++|++|+++++++|+++|||||||||++++||++.+.+....-... ..+.+
T Consensus 1 ~~~~~ia~~Q~~Pi~~~~~~~~~l~r~~~li~~A~~~gadlvvfPE~~l~Gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (303)
T d1uf5a_ 1 TRQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPL 80 (303)
T ss_dssp CCEEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHH
T ss_pred CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
T ss_conf 94799999936776888589999999999999999888939992778523587210013666776666551587899999
Q ss_pred HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEE-CCEEEEEECCEECCCCCCCC--------CHHH
Q ss_conf 99999865201088189983211035543344457882388999981-88179987327707987643--------0122
Q T0542 71 RELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGVFD--------EFRY 141 (590)
Q Consensus 71 ~~la~~~~~~~~~~i~ivvG~~~~~~~~~~~~~~~~g~lyNsa~vi~-~G~ii~~y~K~~Lp~~~~~~--------E~r~ 141 (590)
.++++ ..++.+++|+.+..... .++++||++++|+ +|+++++|+|+||+++++++ |.++
T Consensus 81 ~~~A~------~~~i~i~~G~~~~~~~~------~~~~~yNs~~li~~~G~i~~~y~K~~L~~~~e~~~~~~~~~~e~~~ 148 (303)
T d1uf5a_ 81 FEKAA------ELGIGFNLGYAELVVEG------GVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRY 148 (303)
T ss_dssp HHHHH------HHTCEEEEEEEEEEEET------TEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHH
T ss_pred HHHHH------HCCCEEEEEEEEEEEEC------CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 99998------65956999865432205------8970589999515665432344420279976554333221013425
Q ss_pred CCCCC-CCCEEEECCEEEEEEEEHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCC--------HHHHHHHHHHHHHHCC
Q ss_conf 01699-61068867857885620234144189999996379789983278765783--------8999999999998607
Q T0542 142 FVPGD-TMPIVRLHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDK--------DDTRLELVRKRAQEAG 212 (590)
Q Consensus 142 f~~G~-~~~v~~~~g~riGi~IC~D~w~~~~~~~~la~~Gadlii~psasp~~~~~--------~~~r~~~~~~rA~e~~ 212 (590)
|.+++ ...+|+++++|||++||||.||+ +..+.++.+||+++++++++|....+ ...|....++||.+|+
T Consensus 149 ~~~~~~~~~~~~~~~~rig~~IC~D~~~p-e~~~~la~~Ga~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~arA~en~ 227 (303)
T d1uf5a_ 149 FEPGDLGFPVYDVDAAKMGMFIANDRRWP-EAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNG 227 (303)
T ss_dssp CCCCSSCSCEEEETTEEEEECCGGGGGCH-HHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHT
T ss_pred ECCCCCCCEEEEECCCEEEEECCCCCHHH-HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCC
T ss_conf 51257765058845727886112230025-76666762798899970355666775544201001011345555543055
Q ss_pred HHHHHHHHCCCCCCEEEECCCEEECCCCCEEECCCCCCCCEEEEEEEHHHHHHCCCCCCCC-CCCCCCC
Q ss_conf 2644563127888747846727884788343217899864799986246765114555422-3443211
Q T0542 213 CTTAYLAMIGGQDELVFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAAEAEPPTGVVD-DGLRIDR 280 (590)
Q Consensus 213 ~~vv~aN~vG~e~~~vf~G~S~Iidp~G~ila~~~~f~e~il~~diDl~~~~~~r~~~~~~-~~~~~~~ 280 (590)
+|++++|++|.+++..|.|+|+|++|+|+++++++.++|+++++|||+++++..|...+.. ..+|++.
T Consensus 228 ~~vv~~n~~g~~~~~~~~G~S~I~~p~G~vla~~~~~~e~vl~a~idl~~~~~~R~~~~~~~~~rr~d~ 296 (303)
T d1uf5a_ 228 AWSAAAGKAGMEENCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQH 296 (303)
T ss_dssp CEEEEEEBCEEETTEEECCCCEEECTTSCEEEECCSSSSEEEEEEEEGGGGHHHHTTTTCHHHHCCGGG
T ss_pred CEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCEEEEEEECHHHHHHHHHHCCCHHHCCCHHH
T ss_conf 314313642213353123675899599999987789988799999838999999975886132477435
No 7
>d1f89a_ d.160.1.1 (A:) hypothetical protein yl85 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=0 Score=337.66 Aligned_cols=261 Identities=20% Similarity=0.218 Sum_probs=217.0
Q ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC--CCCEEEECCCCCCCCCHHHHHHHHHHHH-----HHHHHHHHH
Q ss_conf 998458999960674168899999999999999967--9969982640037888123331068899-----999999999
Q T0542 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQ--GAHLVAFPEMALTGYPVEDLALRSSFVE-----ASRTALREL 73 (590)
Q Consensus 1 Ms~~mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~--gadLVVfPEl~ltGY~~~Dl~~~~~~~~-----~~~~~l~~l 73 (590)
|+++||||++|+++..+|+++|++++++++++|+++ |+|||||||+++|||++.++.....+++ ...+.+.++
T Consensus 6 m~~~~kia~~Q~~~~~~D~~~N~~~~~~~i~~A~~~~~~a~lvv~PE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (281)
T d1f89a_ 6 LSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNL 85 (281)
T ss_dssp BSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHH
T ss_pred HCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 22473399995778888999999999999999983489997998688655788656777777653334897799999997
Q ss_pred HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEE-CCEEEEEECCEECCCCCC-----CCCHHHCCCCCC
Q ss_conf 99865201088189983211035543344457882388999981-881799873277079876-----430122016996
Q T0542 74 AARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGV-----FDEFRYFVPGDT 147 (590)
Q Consensus 74 a~~~~~~~~~~i~ivvG~~~~~~~~~~~~~~~~g~lyNsa~vi~-~G~ii~~y~K~~Lp~~~~-----~~E~r~f~~G~~ 147 (590)
++ +.++.+++|...... ..++++||+++++. +|+++.+|+|++++.+.. +.|..+|.+|..
T Consensus 86 A~------~~~i~iv~G~~~~~~-------~~~~~~yNs~~~i~~~G~i~~~~~k~~~~~~~~~~~~~~~e~~~~~~~~~ 152 (281)
T d1f89a_ 86 AN------KFKIILVGGTIPELD-------PKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEK 152 (281)
T ss_dssp HH------HSSCEEECCCEEEEC-------TTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCC
T ss_pred HH------HCCCEEECCEEEEEC-------CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf 64------127423122035631-------45683011011124542211333222332235664334333220221000
Q ss_pred CCEEEECCEEEEEEEEHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCC-CC
Q ss_conf 10688678578856202341441899999963797899832787657838999999999998607264456312788-87
Q T0542 148 MPIVRLHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQ-DE 226 (590)
Q Consensus 148 ~~v~~~~g~riGi~IC~D~w~~~~~~~~la~~Gadlii~psasp~~~~~~~~r~~~~~~rA~e~~~~vv~aN~vG~e-~~ 226 (590)
..+++++++++|++||+|.|+ ++..+.++.+|+++++++++++... ....|..+.++||.+|++|++++|.+|+. ++
T Consensus 153 ~~~~~~~~~~~g~~iC~d~~~-p~~~r~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~ 230 (281)
T d1f89a_ 153 STTIDTKYGKFGVGICYDMRF-PELAMLSARKGAFAMIYPSAFNTVT-GPLHWHLLARSRAVDNQVYVMLCSPARNLQSS 230 (281)
T ss_dssp CEEEEETTEEEEECCGGGGGC-HHHHHHHHHTTEEEEEEECCCBTTH-HHHHHHHHHHHHHHHHTSEEEEECCCCCTTSS
T ss_pred CCCCCCCCCCCCCCCCCCCCC-CCCHHHHHCCCCCCEEEEECCCCCC-CCCCCCCHHHHHCCCCCCCCEEEEECCCCCCC
T ss_conf 111014654444433333322-2210000013555326752445554-41000220222111024333012331467888
Q ss_pred EEEECCCEEECCCCCEEECCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCC
Q ss_conf 478467278847883432178998647999862467651145554223443
Q T0542 227 LVFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAAEAEPPTGVVDDGLR 277 (590)
Q Consensus 227 ~vf~G~S~Iidp~G~ila~~~~f~e~il~~diDl~~~~~~r~~~~~~~~~~ 277 (590)
..|+|+|+|++|+|+++++++. +|+++++|||+++++..|...++..++|
T Consensus 231 ~~~~G~S~Ii~p~G~vl~~~~~-~e~v~~adidl~~~~~~R~~~~~~~~rr 280 (281)
T d1f89a_ 231 YHAYGHSIVVDPRGKIVAEAGE-GEEIIYAELDPEVIESFRQAVPLTKQRR 280 (281)
T ss_dssp SCBCCCCEEECTTSCEEEECCS-SSEEEEEEECHHHHHHHHHHSCCCCCCC
T ss_pred CEEEECEEEECCCCCEEEECCC-CCEEEEEEECHHHHHHHHHHCCHHHHCC
T ss_conf 6761144998599988887799-9849999973899999998696364189
No 8
>d1emsa2 d.160.1.1 (A:10-280) NIT-FHIT fusion protein, N-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00 E-value=0 Score=323.21 Aligned_cols=259 Identities=21% Similarity=0.193 Sum_probs=208.0
Q ss_pred CC-CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99-84589999606741688999999999999999679969982640037888123331068899999999999998652
Q T0542 1 MS-LQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFVEASRTALRELAARLAE 79 (590)
Q Consensus 1 Ms-~~mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~gadLVVfPEl~ltGY~~~Dl~~~~~~~~~~~~~l~~la~~~~~ 79 (590)
|+ .++|||++|+++. +|+++|++++.+++++|+++|||||||||+++++|.+.+.....+.... ...++.+.. .
T Consensus 1 m~~~~~rVA~~Q~~~~-~d~~~N~~~i~~~i~~A~~~gadlvvfPE~~~~~~~~~~~~~~~a~~~~-~~~~~~l~~---~ 75 (271)
T d1emsa2 1 MATGRHFIAVCQMTSD-NDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD-CEYMEKYRE---L 75 (271)
T ss_dssp CCCSEEEEEEECBCCC-SCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHH-HHHHHHHHH---H
T ss_pred CCCCCEEEEEEECCCC-CCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHC-CHHHHHHHH---H
T ss_conf 9988869999958898-8999999999999999997859699988662121879789998877521-467776654---2
Q ss_pred HCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEE-CCEEEEEECCEECCCCCCC-----CCHHHCCCCCC-CCEEE
Q ss_conf 01088189983211035543344457882388999981-8817998732770798764-----30122016996-10688
Q T0542 80 EGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGVF-----DEFRYFVPGDT-MPIVR 152 (590)
Q Consensus 80 ~~~~~i~ivvG~~~~~~~~~~~~~~~~g~lyNsa~vi~-~G~ii~~y~K~~Lp~~~~~-----~E~r~f~~G~~-~~v~~ 152 (590)
+...++.+++|.++..... .++++||+++++. +|+++++|+|+||+++..+ .|..||.+|+. ..+|+
T Consensus 76 a~~~~i~v~~G~~~~~~~~------~~~~~yNsa~vi~~~g~i~~~~~K~~l~~~~~~~~~~~~e~~~~~~g~~~~~v~~ 149 (271)
T d1emsa2 76 ARKHNIWLSLGGLHHKDPS------DAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVD 149 (271)
T ss_dssp HHHTTCEEEEEEEEEEETT------EEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCSCCCCEE
T ss_pred HHCCCCCCCCCCEEEEEEC------CCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCEEE
T ss_conf 0003432224301466304------7885467899994796687742240245544456531001112468854430251
Q ss_pred ECCEEEEEEEEHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCC-CEEEEC
Q ss_conf 6785788562023414418999999637978998327876578389999999999986072644563127888-747846
Q T0542 153 LHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQD-ELVFDG 231 (590)
Q Consensus 153 ~~g~riGi~IC~D~w~~~~~~~~la~~Gadlii~psasp~~~~~~~~r~~~~~~rA~e~~~~vv~aN~vG~e~-~~vf~G 231 (590)
++++++|++||+|.|+ ++..+.++.+|++++++|+++++... ...|+..++++|.+++++++++|++|+++ ...|+|
T Consensus 150 ~~~~~~g~~iC~D~~~-~e~~~~~~~~ga~~i~~p~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~n~~g~~~~~~~~~G 227 (271)
T d1emsa2 150 TPIGRLGLSICYDVRF-PELSLWNRKRGAQLLSFPSAFTLNTG-LAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYG 227 (271)
T ss_dssp ETTEEECCCCGGGGGC-HHHHHHHHHTTCSEEECCBCCCHHHH-HHHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEEC
T ss_pred CCCCCCCCCCCCCCCC-CHHHHHHHHHCCCEEEECCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
T ss_conf 2774114421322112-28999998605728986353555432-046799999877630443000111246789977745
Q ss_pred CCEEECCCCCEEECCCCCCCCEEEEEEEHHHHHHCCCCCCCC
Q ss_conf 727884788343217899864799986246765114555422
Q T0542 232 DSIVVDRDGEVVARAPQFSEGCVVLDLDLPAAEAEPPTGVVD 273 (590)
Q Consensus 232 ~S~Iidp~G~ila~~~~f~e~il~~diDl~~~~~~r~~~~~~ 273 (590)
+|+|++|+|+++++++. +|+++++|||+++++..|...++.
T Consensus 228 ~S~I~~P~G~il~~~~~-~e~il~adiDl~~i~~~R~~~~~~ 268 (271)
T d1emsa2 228 HSMVVDPWGAVVAQCSE-RVDMCFAEIDLSYVDTLREMQPVF 268 (271)
T ss_dssp CCEEECTTSCEEEECCS-SSCEEEEEEEHHHHHHHHHHSCGG
T ss_pred EEEEECCCCCEEEECCC-CCEEEEEEECHHHHHHHHHHCCCC
T ss_conf 46999499948987799-982999997189999999848731
No 9
>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]}
Probab=99.81 E-value=1.2e-18 Score=139.09 Aligned_cols=175 Identities=21% Similarity=0.219 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 55788999999999998415683489705883689999999851695517988778889828779999999997198479
Q T0542 306 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFR 385 (590)
Q Consensus 306 ~e~~~~a~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~ 385 (590)
.+++.+..+..|++++ |.++++||+|||+||+|+|+++.++.|...+..+............++++..+..+++.+.
T Consensus 3 ~~~~i~~~~~~ik~~v---~~~kvvV~lSGGVDSsv~a~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 79 (197)
T d1gpma1 3 PAKIIDDAVARIREQV---GDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIV 79 (197)
T ss_dssp HHHHHHHHHHHHHHHH---TTCEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHTTTTCCCEE
T ss_pred HHHHHHHHHHHHHHHH---CCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 7999999999999995---8996899837878799999999874086322453055335530239999998874396412
Q ss_pred EECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH-CCEEEECC-------------------CHHHHHHHHHH
Q ss_conf 83459999999986183574066555657899999999761-97898748-------------------66777552033
Q T0542 386 TVSIEPMFDAYMASLGLTGLAEENLQSRLRGTTLMAISNQE-GHIVLAPG-------------------NKSELAVGYST 445 (590)
Q Consensus 386 ~i~i~~~~~~~~~~~~~~~~~~~N~qaR~R~~~l~~~a~~~-~~lvl~t~-------------------n~sE~~lG~~t 445 (590)
.+++...+............. .....+.+....+...... ........ ..+-..++..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (197)
T d1gpma1 80 HVPAEDRFLSALAGENDPEAK-RKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLP 158 (197)
T ss_dssp EEECHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHHHHHSSSEEEEECCCCHHHHHHTTC-------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 202788876652200045542-1222211367789999984015777755554311232102466533101013432034
Q ss_pred HCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 306771112230688788999999986100211133213537772588886
Q T0542 446 LYGDSVGAYGPIKDVYKTSIFRLAEWRNRAAAERGQTPPIPEASITKPPSA 496 (590)
Q Consensus 446 ~~Gd~~~~~~p~~~l~Kt~v~~la~~~~~~~~~~~~~~~~p~~i~~~~psa 496 (590)
..++. .-+.||++++|++|+++|+.++ +|++|++|+|+|
T Consensus 159 ~~~~~-~li~PL~~l~K~eV~~lA~~lg-----------lP~~i~~~~p~~ 197 (197)
T d1gpma1 159 KEMKM-GLVEPLKELFKDEVRKIGLELG-----------LPYDMLYRHPFP 197 (197)
T ss_dssp ---CC-EEECTTTTCCHHHHHHHHHHTT-----------CCHHHHTSCCCC
T ss_pred HHHCC-CEEHHCCCCCHHHHHHHHHHCC-----------CCHHHHCCCCCC
T ss_conf 54147-5231124886999999999829-----------899994899999
No 10
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=99.22 E-value=5.3e-10 Score=81.99 Aligned_cols=145 Identities=19% Similarity=0.236 Sum_probs=102.2
Q ss_pred CCC-CEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHCCCC-----EEEECHHHHHHHHH
Q ss_conf 568-34897058836899999998516955179887788-898287799999999971984-----79834599999999
Q T0542 325 GFR-SVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPS-KYSSDHSKGDAAELARRTGLN-----FRTVSIEPMFDAYM 397 (590)
Q Consensus 325 g~~-~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~-~~~s~~~~~~a~~la~~lg~~-----~~~i~i~~~~~~~~ 397 (590)
|.+ ++++++|||+||++++.++.+. | .+|+++++.. ...++.....+..++..++.. ...++.........
T Consensus 2 ~~~gKvvv~~SGG~DS~vla~ll~k~-g-~~v~av~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (218)
T d2c5sa1 2 GVGGKVMVLLSGGIDSPVAAYLTMKR-G-VSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEVQKTIN 79 (218)
T ss_dssp TTTEEEEEECCSSSHHHHHHHHHHHB-T-EEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHHHHHHHH
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHC-C-CEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHH
T ss_conf 97887999954948999999999984-9-918999986798663677777776510000124555247863120333323
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHH----HHHH--HHHHCCCCCCCHHHCCCCCHHHHHHHHHH
Q ss_conf 86183574066555657899999999761978987486677----7552--03330677111223068878899999998
Q T0542 398 ASLGLTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSE----LAVG--YSTLYGDSVGAYGPIKDVYKTSIFRLAEW 471 (590)
Q Consensus 398 ~~~~~~~~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~sE----~~lG--~~t~~Gd~~~~~~p~~~l~Kt~v~~la~~ 471 (590)
...... ...+...|.|..+++.+|+..|+-.+-||+... ..++ ..+......--+.|+.+++|.+++++|+-
T Consensus 80 ~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~~~i~~G~~~~d~~~~~~~~l~~~~~~~~~~iirPll~~~K~eI~~~a~~ 157 (218)
T d2c5sa1 80 KEIPSS--YSMTVMRRMMMRITERIAEERNALAITTGESLGQVASQTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEE 157 (218)
T ss_dssp HHSCGG--GHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTTSCCHHHHHHHGGGCCSCEECTTTTCCHHHHHHHHHH
T ss_pred HCCCCC--HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCHHCHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 124542--388899899999999999971254278312437524455787730100000267776531789999999998
Q ss_pred HH
Q ss_conf 61
Q T0542 472 RN 473 (590)
Q Consensus 472 ~~ 473 (590)
+|
T Consensus 158 ~g 159 (218)
T d2c5sa1 158 IG 159 (218)
T ss_dssp TT
T ss_pred CC
T ss_conf 59
No 11
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.91 E-value=8.2e-08 Score=67.59 Aligned_cols=162 Identities=19% Similarity=0.197 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHC---CCCCCEEEEECCC--CCCCHHHHHHHHHHHHHC
Q ss_conf 55788999999999998415683489705883689999999851---6955179887788--898287799999999971
Q T0542 306 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDA---LGAQNVYGVSMPS--KYSSDHSKGDAAELARRT 380 (590)
Q Consensus 306 ~e~~~~a~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~~a---~g~~~v~~~~mp~--~~~s~~~~~~a~~la~~l 380 (590)
+..+.+-..-.+.++---.+-++++||+|||.||++++.++.+. .+...+.+++.-. +.+|....+.++.+|+.+
T Consensus 4 ~~~~~~k~~~~~~~~~l~~~~~kv~Va~SGG~DS~~Ll~lL~~~~~~~~~~~i~~~~vdh~~r~~s~~~~~~~~~~~~~l 83 (216)
T d1wy5a1 4 ESRVIRKVLALQNDEKIFSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKER 83 (216)
T ss_dssp HHHHHHHHHHHHHHHCSCSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 89999999999999965689986999967859999999999999876687708888751123410332134789999862
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCH----HHHHHHHHHHCCCCC-----
Q ss_conf 98479834599999999861835740665556578999999997619789874866----777552033306771-----
Q T0542 381 GLNFRTVSIEPMFDAYMASLGLTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNK----SELAVGYSTLYGDSV----- 451 (590)
Q Consensus 381 g~~~~~i~i~~~~~~~~~~~~~~~~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~----sE~~lG~~t~~Gd~~----- 451 (590)
|+++....++..... +.. ....+...-..|-..+..+|...|.-.+-||+- .|..+-... .|.+.
T Consensus 84 ~i~~~i~~~~~~~~~--~~~---~~~~~~~~R~~Ry~~l~~~a~~~~~~~ia~GH~~dD~~Et~l~~l~-rg~~~~~l~~ 157 (216)
T d1wy5a1 84 NMKIFVGKEDVRAFA--KEN---RMSLEEAGRFLRYKFLKEILESEGFDCIATAHHLNDLLETSLLFFT-RGTGLDGLIG 157 (216)
T ss_dssp TCCEEEEECCHHHHH--HHT---TCCHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHHHHHHHHHHHHH-HCCCHHHHHC
T ss_pred HHHHHHHCCCHHHHC--CCC---CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH-CCCCCCCCCC
T ss_conf 000102102101111--377---6445787999998876411112231215765202415889999861-4886545667
Q ss_pred ------CCHHHCCCCCHHHHHHHHHHHH
Q ss_conf ------1122306887889999999861
Q T0542 452 ------GAYGPIKDVYKTSIFRLAEWRN 473 (590)
Q Consensus 452 ------~~~~p~~~l~Kt~v~~la~~~~ 473 (590)
.-+-|+-.++|.+++++|+..+
T Consensus 158 ~~~~~~~i~RPLl~~~k~eI~~~a~~~~ 185 (216)
T d1wy5a1 158 FLPKEEVIRRPLYYVKRSEIEEYAKFKG 185 (216)
T ss_dssp SCSEETTEECTTTTCCHHHHHHHHHHTT
T ss_pred CCCCCCEECCHHHCCCHHHHHHHHHHCC
T ss_conf 7763220336230488999999999869
No 12
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.69 E-value=2.1e-07 Score=64.87 Aligned_cols=136 Identities=10% Similarity=0.076 Sum_probs=86.4
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHCCCC---CCEEEEECCC--CCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH
Q ss_conf 5683489705883689999999851695---5179887788--8982877999999999719847983459999999986
Q T0542 325 GFRSVLIGLSGGIDSALVAAIACDALGA---QNVYGVSMPS--KYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMAS 399 (590)
Q Consensus 325 g~~~~viglSGGiDS~~~~~la~~a~g~---~~v~~~~mp~--~~~s~~~~~~a~~la~~lg~~~~~i~i~~~~~~~~~~ 399 (590)
..++++||+|||+||++.+.++.+..+. -++.+++.-. +..|....+.++.+|+.+|+.+.+..+..
T Consensus 12 ~~kkvlva~SGG~DS~~Ll~ll~~~~~~~~~~~l~~~~vdh~~r~~s~~~~~~~~~~~~~~~i~~~i~~~~~-------- 83 (227)
T d1ni5a1 12 TSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQL-------- 83 (227)
T ss_dssp TCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCCC--------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC--------
T ss_conf 899689996384999999999999987588956999986789875214458999999754157632663133--------
Q ss_pred CCCCCCHHHHHHHHH-HHHHHHHHHHHHCCEEEECCC-HHHH---HHHHHHHCCCCCC---------------CHHHCCC
Q ss_conf 183574066555657-899999999761978987486-6777---5520333067711---------------1223068
Q T0542 400 LGLTGLAEENLQSRL-RGTTLMAISNQEGHIVLAPGN-KSEL---AVGYSTLYGDSVG---------------AYGPIKD 459 (590)
Q Consensus 400 ~~~~~~~~~N~qaR~-R~~~l~~~a~~~~~lvl~t~n-~sE~---~lG~~t~~Gd~~~---------------~~~p~~~ 459 (590)
... ..|++++. |--.++..+...+.-++-||. .++. .+=.. ..|++.. -+-|+.+
T Consensus 84 -~~~---~~~~e~~~~~~~~~~~~~~~~~~~~i~~gH~~dD~~Et~l~~l-~~g~~~~~l~~~~~~~~~~~~~iiRPLl~ 158 (227)
T d1ni5a1 84 -AQE---GLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLAL-KRGSGPAGLSAMAEVSEFAGTRLIRPLLA 158 (227)
T ss_dssp -CCS---SSTTTTHHHHHHHHHHHHTCCTTEEEECCCCHHHHHHHHHHHH-TTTCCTTGGGCCCSEEEETTEEEECGGGS
T ss_pred -CCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCHHHHHC
T ss_conf -334---4303668999999988877520389999988886540566766-32642111111001012354431266642
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 87889999999861
Q T0542 460 VYKTSIFRLAEWRN 473 (590)
Q Consensus 460 l~Kt~v~~la~~~~ 473 (590)
++|.+++++++..+
T Consensus 159 ~~k~eI~~~~~~~~ 172 (227)
T d1ni5a1 159 RTRGELVQWARQYD 172 (227)
T ss_dssp CCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHCCCC
T ss_conf 77999998750436
No 13
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.68 E-value=7.6e-07 Score=61.19 Aligned_cols=137 Identities=17% Similarity=0.144 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCC------------CCEEEEECCCCCCCHHHHHHH
Q ss_conf 55788999999999998415683489705883689999999851695------------517988778889828779999
Q T0542 306 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGA------------QNVYGVSMPSKYSSDHSKGDA 373 (590)
Q Consensus 306 ~e~~~~a~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~~a~g~------------~~v~~~~mp~~~~s~~~~~~a 373 (590)
.+++.+.+.-.++.+++. -..+-+-||||+||+++++++.+.+.. .++.+.......+ .....|
T Consensus 16 ~~~~~~~l~~sv~~~~~s--d~~ig~~LSGGlDSs~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~a 91 (169)
T d1ct9a1 16 KNELRQALEDSVKSHLMS--DVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGS--PDLKAA 91 (169)
T ss_dssp HHHHHHHHHHHHHHHTCC--SSCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTTC--HHHHHH
T ss_pred HHHHHHHHHHHHHHHCCC--CCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCC--HHHHHH
T ss_conf 899999999999986134--7844420157720789999999862122110001013455330255245420--233444
Q ss_pred HHHHHHCCCCEEEECHH--HHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHCCEEEECCCH-HHHHHHHHHH
Q ss_conf 99999719847983459--99999998618357-40665556578999999997619789874866-7775520333
Q T0542 374 AELARRTGLNFRTVSIE--PMFDAYMASLGLTG-LAEENLQSRLRGTTLMAISNQEGHIVLAPGNK-SELAVGYSTL 446 (590)
Q Consensus 374 ~~la~~lg~~~~~i~i~--~~~~~~~~~~~~~~-~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~-sE~~lG~~t~ 446 (590)
+.+++.+|+++..+.++ ...+.+.+.+...+ ...-++.+..-+-.|+..|...|.-|+=||+- +|+..||--+
T Consensus 92 ~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~kV~l~G~G~DElf~GY~~~ 168 (169)
T d1ct9a1 92 QEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYF 168 (169)
T ss_dssp HHHHHHHTCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTCCEEECCTTHHHHHTCSGGG
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCC
T ss_conf 44555553332102222110000001233331210464210321799999999976986988478625542476666
No 14
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=98.65 E-value=6.1e-07 Score=61.85 Aligned_cols=132 Identities=22% Similarity=0.148 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 55788999999999998415683489705883689999999851695517988778889828779999999997198479
Q T0542 306 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFR 385 (590)
Q Consensus 306 ~e~~~~a~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~ 385 (590)
.+.+-.++..+++.++.. ...+.+-||||+||+++++++.+..+ ++.+++.....+. ....|+.+|+.+|+++.
T Consensus 14 ~~~~r~~L~~AV~~rl~~--~~~~gv~LSGGlDSs~iaa~~~~~~~--~~~~~s~~~~~~~--e~~~A~~va~~lg~~h~ 87 (299)
T d1jgta1 14 VAAVRAALEKAVAQRVTP--GDTPLVVLSGGIDSSGVAACAHRAAG--ELDTVSMGTDTSN--EFREARAVVDHLRTRHR 87 (299)
T ss_dssp HHHHHHHHHHHHHHHSCT--TCCCEEECCSSHHHHHHHHHHHHHHS--SCEEEEEECSSCC--CHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHHHHCC--CCCEEEECCCHHHHHHHHHHHHHHCC--CCCEEECCCCCHH--HHHHHHHHHHCCCCCCC
T ss_conf 999999999999999557--99979982677999999999998379--9635315864017--88999985111222232
Q ss_pred EECHH--HHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHCCEEEECCCH-HHHHHHHH
Q ss_conf 83459--9999999861835740-665556578999999997619789874866-77755203
Q T0542 386 TVSIE--PMFDAYMASLGLTGLA-EENLQSRLRGTTLMAISNQEGHIVLAPGNK-SELAVGYS 444 (590)
Q Consensus 386 ~i~i~--~~~~~~~~~~~~~~~~-~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~-sE~~lG~~ 444 (590)
++.++ ...+.+...+...+.. -.++.+-+-+ .++.-+...|.-|+=||+- +|+.-||.
T Consensus 88 ~~~i~~~d~~~~l~~~i~~~e~~~~~~~~~~~~~-~~l~~~~~~~~kVvLsG~GaDElfgGY~ 149 (299)
T d1jgta1 88 EITIPTTELLAQLPYAVWASESVDPDIIEYLLPL-TALYRALDGPERRILTGYGADIPLGGMH 149 (299)
T ss_dssp EEECCHHHHHTTHHHHHHHHCCCCHHHHHHHHHH-HHHHHHCCSSCCEEECCTTTHHHHTTTC
T ss_pred CCCEEHHHHHCCCHHHHHCCCCCHHCCCCCCCHH-HHHHHHHHHCCCEEEECCCHHHHHCCCH
T ss_conf 1100011210012012202345200023443147-7877666311310000447488847646
No 15
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]}
Probab=98.51 E-value=4.1e-06 Score=56.37 Aligned_cols=135 Identities=18% Similarity=0.172 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHC--CCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 5578899999999999841--56834897058836899999998516955179887788898287799999999971984
Q T0542 306 DEEVYSALVVGLRAYVAKN--GFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLN 383 (590)
Q Consensus 306 ~e~~~~a~~~~l~d~~~~~--g~~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~ 383 (590)
.|++...+-..+..-+++. ..+.|-+-||||+||+++++++.+.. .++.+++.-..++. ..+.|+.+|+.+|++
T Consensus 11 ~e~~~~~id~~l~~~v~~~~~~~~~VGv~LSGGlDSslia~~~~~~~--~~~~tfs~~~~~~~--e~~~A~~va~~l~~~ 86 (296)
T d1q15a1 11 REPLLALIDRYLNAPLEDLAPRFDTVGIPLSGGLDSSLVTALASRHF--KKLNTYSIGTELSN--EFEFSQQVADALGTH 86 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCSEEEEECCSSHHHHHHHHHHTTTC--SEEEEEEEEETTBC--CHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCC--CCCCEEEECCCCCC--HHHHHHHHHHHCCCC
T ss_conf 69999999999999999852589879998237088999999998617--99766983368872--678999987441566
Q ss_pred EEEECH--HHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHCCEEEECCC-HHHHHHHHHH
Q ss_conf 798345--9999999986183574-066555657899999999761978987486-6777552033
Q T0542 384 FRTVSI--EPMFDAYMASLGLTGL-AEENLQSRLRGTTLMAISNQEGHIVLAPGN-KSELAVGYST 445 (590)
Q Consensus 384 ~~~i~i--~~~~~~~~~~~~~~~~-~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n-~sE~~lG~~t 445 (590)
|.++.+ +...+.+.+.+...+. ..-....-+-+..++..|.. +.-|+=||+ -+|+.-||.-
T Consensus 87 h~~i~~~~~~~~~~l~~~i~~~e~~~~~~~~~~~~~~~l~k~a~~-~~kV~lsG~GaDElfgGY~~ 151 (296)
T d1q15a1 87 HQMKILSETEVINGIIESIYYNEIFDGLSAEIQSGLFNVYRQAQG-QVSCMLTGYGSDLLFGGILK 151 (296)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHBT-TBSEEECCTTHHHHHTTTSC
T ss_pred CEEEEEEEHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC-CCCEEEECCCCCCCCCCCCC
T ss_conf 447774201210122022212233322101233322121022334-44313404785400377653
No 16
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}
Probab=98.36 E-value=3.1e-06 Score=57.19 Aligned_cols=146 Identities=16% Similarity=0.147 Sum_probs=86.2
Q ss_pred CCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH------
Q ss_conf 68348970588368999999985169551798877888982877999999999719847983459999999986------
Q T0542 326 FRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMAS------ 399 (590)
Q Consensus 326 ~~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~~i~i~~~~~~~~~~------ 399 (590)
++++|+.+|||+||++++.++.+. |. .|++|+.-.-.......+.++..++.+++....+........+...
T Consensus 1 mkK~Vvl~SGGlDS~v~a~~l~~~-g~-~v~~v~~~ygqr~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (230)
T d2pg3a1 1 MKRAVVVFSGGQDSTTCLIQALQD-YD-DVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDVGLLNELATSSLTRDS 78 (230)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHH-CS-EEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEECTHHHHTSHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CC-EEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCC
T ss_conf 986999848868899999999986-99-6999999889754899999987677635440122103344312455433445
Q ss_pred CCCCCC--HHHHH-----HHHHHH--HHHHHHHHHHCCEEEECCCHHHHHHHHH---------------HHCCCCCCCHH
Q ss_conf 183574--06655-----565789--9999999761978987486677755203---------------33067711122
Q T0542 400 LGLTGL--AEENL-----QSRLRG--TTLMAISNQEGHIVLAPGNKSELAVGYS---------------TLYGDSVGAYG 455 (590)
Q Consensus 400 ~~~~~~--~~~N~-----qaR~R~--~~l~~~a~~~~~lvl~t~n~sE~~lG~~---------------t~~Gd~~~~~~ 455 (590)
...... ..+.. ..|... .+...+|...+.-.+.+|.-++-..+|. +..+...--.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~p~r~~~~l~~~~~~a~~~~~~~i~~G~~~~d~~~~~d~~~~f~~~~~~~~~~~~~~~~~i~~ 158 (230)
T d2pg3a1 79 IPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFET 158 (230)
T ss_dssp CCCCC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSSCCGGGSHHHHHHHHHHHHHHHTSCCEEEC
T ss_pred CCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 44320234412677526650068889999999887212121454333433356654076899999887751566532686
Q ss_pred HCCCCCHHHHHHHHHHHH
Q ss_conf 306887889999999861
Q T0542 456 PIKDVYKTSIFRLAEWRN 473 (590)
Q Consensus 456 p~~~l~Kt~v~~la~~~~ 473 (590)
|+.+++|.++..+++-..
T Consensus 159 P~~~~tK~EI~~~~~~~~ 176 (230)
T d2pg3a1 159 PLMWLNKAETWALADYYQ 176 (230)
T ss_dssp TTTTCCHHHHHHHHHHTT
T ss_pred EEECCCHHHHHHHHHHCC
T ss_conf 431588999999987605
No 17
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=98.36 E-value=2.7e-06 Score=57.59 Aligned_cols=143 Identities=15% Similarity=0.118 Sum_probs=73.7
Q ss_pred CEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCC-----C
Q ss_conf 34897058836899999998516955179887788898287799999999971984798345999999998618-----3
Q T0542 328 SVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLG-----L 402 (590)
Q Consensus 328 ~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~~i~i~~~~~~~~~~~~-----~ 402 (590)
+++|++|||+||++++.++.+..|- +|+++.+...... ..+.....+..++.......+............ .
T Consensus 2 KvlvA~SGG~DS~vll~lL~e~~~~-~vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (165)
T d1j20a1 2 KIVLAYSGGLDTSIILKWLKETYRA-EVIAFTADIGQGE--EVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGA 78 (165)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHTC-EEEEEEEESSCSS--CHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTC
T ss_pred EEEEEEECHHHHHHHHHHHHHCCCC-EEEEEEECCCCHH--HHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHHHH
T ss_conf 8999972889999999999972899-7999980358747--778888899860665225530002335522470778999
Q ss_pred C----CCHHHHHHHHHHHHHHHHHHHHH--CCEEE--EC--CCHHHHHHHHHHHCCCC--CCCHHHCCCCCHHHHHHHHH
Q ss_conf 5----74066555657899999999761--97898--74--86677755203330677--11122306887889999999
Q T0542 403 T----GLAEENLQSRLRGTTLMAISNQE--GHIVL--AP--GNKSELAVGYSTLYGDS--VGAYGPIKDVYKTSIFRLAE 470 (590)
Q Consensus 403 ~----~~~~~N~qaR~R~~~l~~~a~~~--~~lvl--~t--~n~sE~~lG~~t~~Gd~--~~~~~p~~~l~Kt~v~~la~ 470 (590)
. ....................... ..... .. +........+.+...+. ..-+-|+..++|.+++++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~rpl~~~~k~ei~~ya~ 158 (165)
T d1j20a1 79 VYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAE 158 (165)
T ss_dssp CBTTTBCCTTTTTHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHSTTCEEECHHHHCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHH
T ss_conf 98743135677887766655442100023444444540467875444420243268972899861067998999999999
Q ss_pred HHH
Q ss_conf 861
Q T0542 471 WRN 473 (590)
Q Consensus 471 ~~~ 473 (590)
-.+
T Consensus 159 ~~~ 161 (165)
T d1j20a1 159 AHG 161 (165)
T ss_dssp HTT
T ss_pred HHC
T ss_conf 928
No 18
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.19 E-value=3.9e-05 Score=49.93 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=76.5
Q ss_pred CCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH-HHHHHHHCCCCEEEECHHHHHHH-HHHHC---C
Q ss_conf 8348970588368999999985169551798877888982877999-99999971984798345999999-99861---8
Q T0542 327 RSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGD-AAELARRTGLNFRTVSIEPMFDA-YMASL---G 401 (590)
Q Consensus 327 ~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~-a~~la~~lg~~~~~i~i~~~~~~-~~~~~---~ 401 (590)
++++|++|||+||+|++.++.+. | ..++++.+-.......+.++ ...........+..++....... ..... .
T Consensus 11 kKv~vA~SGGvDSsvll~lL~~~-g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (188)
T d1k92a1 11 QRIGIAFSGGLDTSAALLWMRQK-G-AVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGA 88 (188)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHT-T-CEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHTC
T ss_pred CEEEEEECCCHHHHHHHHHHHHC-C-CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 98999957977999999999985-9-947398510579706778889999997053123552054434664215999999
Q ss_pred CC----CCHH---HHHHHHHHHHHHHHHHHHHCCEEEECCCH-----HH-HHHHHHHHCCCCCCCHHHCCC-------CC
Q ss_conf 35----7406---65556578999999997619789874866-----77-755203330677111223068-------87
Q T0542 402 LT----GLAE---ENLQSRLRGTTLMAISNQEGHIVLAPGNK-----SE-LAVGYSTLYGDSVGAYGPIKD-------VY 461 (590)
Q Consensus 402 ~~----~~~~---~N~qaR~R~~~l~~~a~~~~~lvl~t~n~-----sE-~~lG~~t~~Gd~~~~~~p~~~-------l~ 461 (590)
.. +... ......+....+...|...+...+-++.. .. ....+.+. .....-+.|+-+ +.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ii~P~~~~~~~~~~~s 167 (188)
T d1k92a1 89 FHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLT-NAELQIYKPWLDTDFIDELGG 167 (188)
T ss_dssp CCCEETTEECCCHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTSSHHHHHHHHHHHH-CTTCEEECGGGCHHHHHHSSS
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHH-CCCCCEECHHHHHHHHCCCCC
T ss_conf 9998707835640377889999999999998383355434113323433310577751-998874230465654413699
Q ss_pred HHHHHHHHHHHH
Q ss_conf 889999999861
Q T0542 462 KTSIFRLAEWRN 473 (590)
Q Consensus 462 Kt~v~~la~~~~ 473 (590)
|.++.+.|+-.|
T Consensus 168 k~ei~~ya~~~g 179 (188)
T d1k92a1 168 RHEMSEFMIACG 179 (188)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999849
No 19
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.17 E-value=0.00012 Score=46.67 Aligned_cols=136 Identities=17% Similarity=0.148 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCC------------CEEEEECCCCCCCHHHHHH
Q ss_conf 0557889999999999984156834897058836899999998516955------------1798877888982877999
Q T0542 305 ADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQ------------NVYGVSMPSKYSSDHSKGD 372 (590)
Q Consensus 305 ~~e~~~~a~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~~a~g~~------------~v~~~~mp~~~~s~~~~~~ 372 (590)
..+++.+.+--.++.+++. - ..+-+-|||||||+++++++.+..+.. ++.+...-..++ .....
T Consensus 15 ~~eel~~~l~~sV~~rl~s-D-vpig~~LSGGlDSs~Iaal~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~--~e~~~ 90 (324)
T d1ct9a1 15 DKNELRQALEDSVKSHLMS-D-VPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGS--PDLKA 90 (324)
T ss_dssp CHHHHHHHHHHHHHHHTCC-S-SCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTTC--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC-C-CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCC--CHHHH
T ss_conf 4999999999999998242-8-867877156188999999999987511233212213477766431046788--56899
Q ss_pred HHHHHHHCCCCEEEECHHH--HHHHHHHH---CCCCCC-HHHHHHHHHHHHHHHHHHHHHCCEEEECCC-HHHHHHHHHH
Q ss_conf 9999997198479834599--99999986---183574-066555657899999999761978987486-6777552033
Q T0542 373 AAELARRTGLNFRTVSIEP--MFDAYMAS---LGLTGL-AEENLQSRLRGTTLMAISNQEGHIVLAPGN-KSELAVGYST 445 (590)
Q Consensus 373 a~~la~~lg~~~~~i~i~~--~~~~~~~~---~~~~~~-~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n-~sE~~lG~~t 445 (590)
|+.+|+.+|..+..+.++. ..+.+... +...+. ...+. .=...++..|...|.-|+=||+ .+|+.-||.-
T Consensus 91 a~~~a~~~~~~~~~v~~~~~~~~~~~~~~~~~~e~~~~~~~~~~---~~~~~l~~~a~~~~~kV~LsG~GaDElfgGY~~ 167 (324)
T d1ct9a1 91 AQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRAS---TPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLY 167 (324)
T ss_dssp HHHHHHHHTCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHH---HHHHHHHHHHHHTTCCEEECCTTHHHHHTCSGG
T ss_pred HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCC---CHHHHHHHHHHCCCCEEEECCCCCHHHHHCCHH
T ss_conf 99998641366518997140577789999998760388643200---078999999851797276305554534302203
Q ss_pred HC
Q ss_conf 30
Q T0542 446 LY 447 (590)
Q Consensus 446 ~~ 447 (590)
+.
T Consensus 168 ~~ 169 (324)
T d1ct9a1 168 FH 169 (324)
T ss_dssp GG
T ss_pred HH
T ss_conf 31
No 20
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=98.14 E-value=0.00021 Score=45.11 Aligned_cols=145 Identities=10% Similarity=0.000 Sum_probs=83.1
Q ss_pred CCEEEECCCCHHHHHHHHHHHHCCC--CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCC
Q ss_conf 8348970588368999999985169--55179887788898287799999999971984798345999999998618357
Q T0542 327 RSVLIGLSGGIDSALVAAIACDALG--AQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLGLTG 404 (590)
Q Consensus 327 ~~~viglSGGiDS~~~~~la~~a~g--~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~~i~i~~~~~~~~~~~~~~~ 404 (590)
+.++++.|||.||++++.|+.+... ...+..+...+....+++.+-++.+++.+|+......+...............
T Consensus 27 d~i~va~SGGKDS~vlL~L~~~~~~~~~~~~~~v~~d~~~~~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (211)
T d1zuna1 27 DNPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDQMVEEMGLDLITHINPDGVAQGINPFTHGS 106 (211)
T ss_dssp SSEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCCHHHHHHHHHHHHTTTCCEEEECC--------------C
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCCC
T ss_conf 99799957857889999999863233368722898457555421699999999993996478506167774135101575
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHH----HHH-----------------------HHCCCC-CCCHHH
Q ss_conf 4066555657899999999761978987486677755----203-----------------------330677-111223
Q T0542 405 LAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELAV----GYS-----------------------TLYGDS-VGAYGP 456 (590)
Q Consensus 405 ~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~sE~~l----G~~-----------------------t~~Gd~-~~~~~p 456 (590)
.....-+.+....+..........+......+... .+. +...++ .--++|
T Consensus 107 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~P 184 (211)
T d1zuna1 107 --AKHTDIMKTEGLKQALDKHGFDAAFGGARRDEEKSRAKERVYSFRDSKHRWDPKNQRPELWNVYNGNVNKGESIRVFP 184 (211)
T ss_dssp --CHHHHHHTHHHHHHHHHHHTCSEEECCCCTTSSGGGGGCCSEEEECTTCCBCGGGCCCCCSSCCCCCCCTTCEEEECT
T ss_pred --CCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEC
T ss_conf --445302332258899986231033305302131344314113232035444643344112113466579999999962
Q ss_pred CCCCCHHHHHHHHHHHH
Q ss_conf 06887889999999861
Q T0542 457 IKDVYKTSIFRLAEWRN 473 (590)
Q Consensus 457 ~~~l~Kt~v~~la~~~~ 473 (590)
|.+.+..+|+..++..|
T Consensus 185 I~~Wt~~DVw~yl~~~~ 201 (211)
T d1zuna1 185 LSNWTELDIWQYIYLEG 201 (211)
T ss_dssp TTTCCHHHHHHHHHHHT
T ss_pred HHHCCHHHHHHHHHHCC
T ss_conf 15299999999999809
No 21
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.10 E-value=6.7e-05 Score=48.38 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=70.6
Q ss_pred CCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH--C-C-C
Q ss_conf 8348970588368999999985169551798877888982877999999999719847983459999999986--1-8-3
Q T0542 327 RSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMAS--L-G-L 402 (590)
Q Consensus 327 ~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~~i~i~~~~~~~~~~--~-~-~ 402 (590)
++++|++|||+||+++|.++.+. |- +|+++++-...+.+. ....+..............+.......... . . .
T Consensus 2 ~KIvvalSGGvDS~vl~~lL~~~-~~-~v~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (168)
T d1vl2a1 2 EKVVLAYSGGLDTSVILKWLCEK-GF-DVIAYVANVGQKDDF-VAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGNA 78 (168)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHT-TC-EEEEEEEESSCCCCH-HHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHTTTC
T ss_pred CEEEEEECCHHHHHHHHHHHHHC-CC-EEEEEECCCCCCCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999962688899999999986-99-699998025777304-6799999985575310024578776542224589999
Q ss_pred CCCHHH---HHHHHHHHHHHHHHHH--HHCCEEE----ECCCHHHHHHHHHHHCCCCCCCHHHCCCC-------CHHHHH
Q ss_conf 574066---5556578999999997--6197898----74866777552033306771112230688-------788999
Q T0542 403 TGLAEE---NLQSRLRGTTLMAISN--QEGHIVL----APGNKSELAVGYSTLYGDSVGAYGPIKDV-------YKTSIF 466 (590)
Q Consensus 403 ~~~~~~---N~qaR~R~~~l~~~a~--~~~~lvl----~t~n~sE~~lG~~t~~Gd~~~~~~p~~~l-------~Kt~v~ 466 (590)
...... ....+.....+..... ......+ +.+...-..-.+....-....-+.|+-++ +|.++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~virPl~~~~~~~~~~sk~ei~ 158 (168)
T d1vl2a1 79 MYEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALNPNLKVISPWKDPEFLAKFKGRTDLI 158 (168)
T ss_dssp CBTTTBCCHHHHHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHCTTSEEECGGGCHHHHHHTC--CHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECHHHHCCCCCCCHHHHH
T ss_conf 86012378899987666666778764000025652012214532100046776406877990242111234479999999
Q ss_pred HHHHHHH
Q ss_conf 9999861
Q T0542 467 RLAEWRN 473 (590)
Q Consensus 467 ~la~~~~ 473 (590)
+.|+-.|
T Consensus 159 ~ya~~~~ 165 (168)
T d1vl2a1 159 NYAMEKG 165 (168)
T ss_dssp HHHHHHT
T ss_pred HHHHHCC
T ss_conf 9999849
No 22
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]}
Probab=97.33 E-value=0.0028 Score=37.74 Aligned_cols=143 Identities=14% Similarity=0.071 Sum_probs=86.4
Q ss_pred CCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCC-CCCC
Q ss_conf 834897058836899999998516955179887788898287799999999971984798345999999998618-3574
Q T0542 327 RSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLG-LTGL 405 (590)
Q Consensus 327 ~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~~i~i~~~~~~~~~~~~-~~~~ 405 (590)
.++++..|||.||+|++-|+.++- + .+..++.-+-..-++|.+-++.+++.+|++...+.-...........+ .-..
T Consensus 45 ~~v~vs~SgGkDS~vllhl~~~~~-~-~~~vvf~DTg~~fpeT~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (215)
T d1sura_ 45 GEYVLSSSFGIQAAVSLHLVNQIR-P-DIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQ 122 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHHS-T-TCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHCCGGGS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-C-CCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCC
T ss_conf 988999448758999999998357-9-94079987786758789999999986196046886030479998561786667
Q ss_pred HHHHH----HHHHHHHHHHHHHHHHCCEEEECCCH-HH----HHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHH
Q ss_conf 06655----56578999999997619789874866-77----75520333067711122306887889999999861
Q T0542 406 AEENL----QSRLRGTTLMAISNQEGHIVLAPGNK-SE----LAVGYSTLYGDSVGAYGPIKDVYKTSIFRLAEWRN 473 (590)
Q Consensus 406 ~~~N~----qaR~R~~~l~~~a~~~~~lvl~t~n~-sE----~~lG~~t~~Gd~~~~~~p~~~l~Kt~v~~la~~~~ 473 (590)
..++. +-|-..++-.+++. .+.-+.=+|-+ .| ..+.+.... ++.--++||.+....+|++.++-.+
T Consensus 123 ~~~~~~~~c~~~K~~P~~~~l~~-~~~~~~i~G~Rr~Es~~Ra~~~~~~~~-~~~~kv~Pi~~Wt~~dVw~Yi~~~~ 197 (215)
T d1sura_ 123 GVEGIEKYNDINKVEPMNRALKE-LNAQTWFAGLRREQSGSRANLPVLAIQ-RGVFKVLPIIDWDNRTIYQYLQKHG 197 (215)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHH-TTEEEEECCCCTTSSSTTTTCCSEEEE-TTEEEECTTTTCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHCCHHCCCHHHHHHC-CCCEEHHHHHHHCCHHHHHCCCCEEEC-CCEEEEECHHHCCHHHHHHHHHHCC
T ss_conf 85036664100201631443303-571106877764161757409764004-9999992418599999999999839
No 23
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.96 E-value=0.0024 Score=38.09 Aligned_cols=65 Identities=23% Similarity=0.157 Sum_probs=46.2
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEC--CCCCCC--HH--HHHHHHHHHHHCCCCEEEECHHH
Q ss_conf 568348970588368999999985169551798877--888982--87--79999999997198479834599
Q T0542 325 GFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSM--PSKYSS--DH--SKGDAAELARRTGLNFRTVSIEP 391 (590)
Q Consensus 325 g~~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~m--p~~~~s--~~--~~~~a~~la~~lg~~~~~i~i~~ 391 (590)
|..+|++..|||-||++++..|.+. | ..|.++.+ |....| -+ ..+..+..|+.||++...+.+..
T Consensus 2 ~~~~V~vl~SGGKDS~lAl~~a~~~-G-~eV~~L~t~~~~~~~s~~~h~~~~~ll~~qAealgiPl~~~~~~~ 72 (226)
T d2d13a1 2 GLADVAVLYSGGKDSNYALYWALKS-G-LRVRYLVSMVSENEESYMYHTPNVELTSLQARALGIPIIKGFTKG 72 (226)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT-T-CEEEEEEEEECCC---------CCTTHHHHHHHHTCCEEEEEC--
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHC-C-CEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCC
T ss_conf 7221999926869999999999985-9-905999998437899671657889999999986389826873478
No 24
>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.50 E-value=0.0067 Score=35.20 Aligned_cols=121 Identities=15% Similarity=0.060 Sum_probs=72.1
Q ss_pred CCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCH
Q ss_conf 83489705883689999999851695517988778889828779999999997198479834599999999861835740
Q T0542 327 RSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLGLTGLA 406 (590)
Q Consensus 327 ~~~viglSGGiDS~~~~~la~~a~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~~i~i~~~~~~~~~~~~~~~~~ 406 (590)
.+++.=+|||+ |.|++.+..+. |- .|+.+++ ++++.+.+.++.+++.|.- |.......-..
T Consensus 5 Gk~l~LlSGGi-SpVAa~lmmkR-G~-~V~~v~f---~~~~~~~ekv~~l~~~L~~-------------y~~~~~~~~~v 65 (132)
T d1vbka1 5 GRMIGILHDEL-SALAIFLMMKR-GV-EVIPVYI---GKDDKNLEKVRSLWNLLKR-------------YSYGSKGFLVV 65 (132)
T ss_dssp CEEEEECSSHH-HHHHHHHHHHB-TC-EEEEEEE---SCSSHHHHHHHHHHHHHHT-------------TCTTSCCCCEE
T ss_pred CEEEEEECCCC-HHHHHHHHHHC-CC-EEEEEEE---CCCHHHHHHHHHHHHHHHH-------------HCCCCCCEEEE
T ss_conf 62888633784-29999999977-98-7999997---1888899999999999998-------------48998728999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH------HHCCCCCCCHHHCCCCCHHHHHHHHHHHH
Q ss_conf 66555657899999999761978987486677755203------33067711122306887889999999861
Q T0542 407 EENLQSRLRGTTLMAISNQEGHIVLAPGNKSELAVGYS------TLYGDSVGAYGPIKDVYKTSIFRLAEWRN 473 (590)
Q Consensus 407 ~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~sE~~lG~~------t~~Gd~~~~~~p~~~l~Kt~v~~la~~~~ 473 (590)
+.-| ...+.+|...++--+-||.--| .+|-- ++..-..--+-|+.+..|.++.++||-++
T Consensus 66 ---~~~~---~~~~riA~~~~a~~ivtG~~~e-~vgqvasqt~~~~~~~~~pIlRPLi~~DK~EIi~~Ar~IG 131 (132)
T d1vbka1 66 ---AESF---DRVLKLIRDFGVKGVIKGLRPN-DLNSEVSEITEDFKMFPVPVYYPLIALPEEYIKSVKERLG 131 (132)
T ss_dssp ---ESSH---HHHHHHHHHHTCCEEECCCCGG-GCCTTCHHHHHHHHHCSSCEECHHHHSCHHHHHHHHHHHT
T ss_pred ---EEHH---HHHHHHHHHHHHHCEEEEEECC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf ---5089---9999999996462648887356-2101889999998630662102867899999999999858
No 25
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=83.73 E-value=0.36 Score=23.80 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=44.3
Q ss_pred CCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9984-589999606741688999999999999999679969982640037888123331068899999999999998652
Q T0542 1 MSLQ-LRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFVEASRTALRELAARLAE 79 (590)
Q Consensus 1 Ms~~-mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~gadLVVfPEl~ltGY~~~Dl~~~~~~~~~~~~~l~~la~~~~~ 79 (590)
|.++ .+|+++ +|+.+|++...+.++.+.+.++|+|++- +|++....-..++. .+.+.+.+
T Consensus 1 ~~~~~~~i~~~------sd~hg~~eale~~~~~~~~~~~D~vv~~---------GDl~~~~~~~~~~~----~~~~~L~~ 61 (228)
T d1uf3a_ 1 MRRTVRYILAT------SNPMGDLEALEKFVKLAPDTGADAIALI---------GNLMPKAAKSRDYA----AFFRILSE 61 (228)
T ss_dssp CCCCCCEEEEE------ECCTTCHHHHHHHHTHHHHHTCSEEEEE---------SCSSCTTCCHHHHH----HHHHHHGG
T ss_pred CCCCCCEEEEE------ECCCCCHHHHHHHHHHHHHCCCCEEEEC---------CCCCCCCCCCHHHH----HHHHHHCC
T ss_conf 98754389999------5788999999999998766198999989---------99999976416899----75543203
Q ss_pred HCCCCEEEEEEEEE
Q ss_conf 01088189983211
Q T0542 80 EGFGELPVLVGYLD 93 (590)
Q Consensus 80 ~~~~~i~ivvG~~~ 93 (590)
.. ..+..+.|...
T Consensus 62 ~~-~pv~~i~GNHD 74 (228)
T d1uf3a_ 62 AH-LPTAYVPGPQD 74 (228)
T ss_dssp GC-SCEEEECCTTS
T ss_pred CC-CEEEEEECCCC
T ss_conf 45-36999966887
No 26
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}
Probab=81.85 E-value=0.66 Score=22.06 Aligned_cols=34 Identities=9% Similarity=0.112 Sum_probs=28.4
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 5899996067416889999999999999996799699826
Q T0542 5 LRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFP 44 (590)
Q Consensus 5 mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~gadLVVfP 44 (590)
|||+++ +|+.+|+....+.++.+.+.++|.|++-
T Consensus 1 MkI~ii------SDiHgn~~al~~vl~~~~~~~~D~ii~~ 34 (165)
T d1s3la_ 1 MKIGIM------SDTHDHLPNIRKAIEIFNDENVETVIHC 34 (165)
T ss_dssp CEEEEE------CCCTTCHHHHHHHHHHHHHSCCSEEEEC
T ss_pred CEEEEE------EECCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 979999------8579997999999999986699899999
No 27
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}
Probab=72.61 E-value=1.4 Score=19.98 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=25.6
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 5899996067416889999999999999996799699826
Q T0542 5 LRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFP 44 (590)
Q Consensus 5 mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~gadLVVfP 44 (590)
|||+++ +|+.+|+....+.++.+.+.++|.+++=
T Consensus 2 Mki~ii------SDiHg~~~al~~vl~~~~~~~~D~iv~~ 35 (184)
T d1su1a_ 2 MKLMFA------SDIHGSLPATERVLELFAQSGAQWLVIL 35 (184)
T ss_dssp CEEEEE------CCCTTBHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CEEEEE------EECCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 689999------5158998999999998855699899992
No 28
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=68.81 E-value=2.6 Score=18.14 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=24.0
Q ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 9984589999606741688999999999999999679969982
Q T0542 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAF 43 (590)
Q Consensus 1 Ms~~mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~gadLVVf 43 (590)
|+ ++||+++ .|..+|.....+.++.. .+++|+|++
T Consensus 1 m~-~~kI~vi------SD~Hgn~~al~~vl~~~-~~~~D~iih 35 (173)
T d3ck2a1 1 MA-KQTIIVM------SDSHGDSLIVEEVRDRY-VGKVDAVFH 35 (173)
T ss_dssp CC-CEEEEEE------CCCTTCHHHHHHHHHHH-TTTSSEEEE
T ss_pred CC-CCEEEEE------ECCCCCHHHHHHHHHHH-HCCCCEEEE
T ss_conf 99-8899999------63689979999999986-558989997
No 29
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]}
Probab=67.49 E-value=1.6 Score=19.49 Aligned_cols=26 Identities=8% Similarity=0.224 Sum_probs=17.1
Q ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 998458999960674168899999999999999
Q T0542 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHS 33 (590)
Q Consensus 1 Ms~~mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A 33 (590)
|..+|||+++++. | |+..+.+.++++
T Consensus 3 ~~~~mkIgii~~~---G----n~~s~~~al~~~ 28 (202)
T d1q7ra_ 3 FQSNMKIGVLGLQ---G----AVREHVRAIEAC 28 (202)
T ss_dssp CCCCCEEEEESCG---G----GCHHHHHHHHHT
T ss_pred CCCCCEEEEEECC---C----CHHHHHHHHHHC
T ss_conf 5469879999789---9----899999999987
No 30
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]}
Probab=64.20 E-value=3.7 Score=17.11 Aligned_cols=74 Identities=16% Similarity=0.033 Sum_probs=36.3
Q ss_pred HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH--HCCCCCCEE-EEECCCCCC-----------------CHHHHHHHH
Q ss_conf 999999984156834897058836899999998--516955179-887788898-----------------287799999
Q T0542 315 VGLRAYVAKNGFRSVLIGLSGGIDSALVAAIAC--DALGAQNVY-GVSMPSKYS-----------------SDHSKGDAA 374 (590)
Q Consensus 315 ~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~--~a~g~~~v~-~~~mp~~~~-----------------s~~~~~~a~ 374 (590)
.+|.+-+++..- . |.=++-|-=+.++++|.. ..+ +++|- -+.|-+... --.+.+.|+
T Consensus 119 ~~i~~~~~~~~~-~-vtilaiGPLTNiA~Al~~~~p~i-~~~i~~iviMGG~~~~~GN~~~~~~~p~aEfN~~~DPeAA~ 195 (327)
T d1kica_ 119 QLLADLVMNSEE-K-VTICVTGPLSNVAWCIDKYGEKF-TSKVEECVIMGGAVDVRGNVFLPSTDGTAEWNIYWDPASAK 195 (327)
T ss_dssp HHHHHHHHTCSS-C-EEEEECSCTHHHHHHHHHHTHHH-HTTEEEEEEECCCSSSCCSCCCTTCCSCCCHHHHHCHHHHH
T ss_pred HHHHHHHHHCCC-C-EEEEECCCHHHHHHHHHHCCCHH-HHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCHHHHH
T ss_conf 999999996899-7-89998367069999999708056-76456589970433578854577898431211014989999
Q ss_pred HHHHHCCCCEEEECHHH
Q ss_conf 99997198479834599
Q T0542 375 ELARRTGLNFRTVSIEP 391 (590)
Q Consensus 375 ~la~~lg~~~~~i~i~~ 391 (590)
.+-+..|++...++.+-
T Consensus 196 iV~~s~~~~i~~vpldv 212 (327)
T d1kica_ 196 TVFGCPGLRRIMFSLDS 212 (327)
T ss_dssp HHHTCTTCCEEEECHHH
T ss_pred HHHHCCCCCEEEECCCC
T ss_conf 99837798579835542
No 31
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]}
Probab=64.15 E-value=3.7 Score=17.10 Aligned_cols=21 Identities=10% Similarity=0.067 Sum_probs=10.6
Q ss_pred HHHHHHHHHHCCCCEEEECHHH
Q ss_conf 9999999997198479834599
Q T0542 370 KGDAAELARRTGLNFRTVSIEP 391 (590)
Q Consensus 370 ~~~a~~la~~lg~~~~~i~i~~ 391 (590)
-+.|+.+-+. |++...++.+-
T Consensus 172 PeAA~iVl~s-~~~i~~v~ldv 192 (313)
T d2masa_ 172 PEAAHIVFNE-SWQVTMVGLDL 192 (313)
T ss_dssp HHHHHHHHHS-SSCEEEECHHH
T ss_pred HHHHHHHHCC-CCCEEEECCHH
T ss_conf 4787998536-99859966102
No 32
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.50 E-value=4.3 Score=16.68 Aligned_cols=69 Identities=16% Similarity=0.083 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCHHH---HHHHHHHHH---C-CCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf 8899999999999841568348970588368---999999985---1-6955179887788898287799999999971
Q T0542 309 VYSALVVGLRAYVAKNGFRSVLIGLSGGIDS---ALVAAIACD---A-LGAQNVYGVSMPSKYSSDHSKGDAAELARRT 380 (590)
Q Consensus 309 ~~~a~~~~l~d~~~~~g~~~~viglSGGiDS---~~~~~la~~---a-~g~~~v~~~~mp~~~~s~~~~~~a~~la~~l 380 (590)
+.+-+...+..+...++-+-++|||+||--| +++..|... . .+..+|..+.|-++|=+. ++-..|++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~t~---~~r~~L~~~~ 83 (286)
T d1odfa_ 8 TIEFLDKYIPEWFETGNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTH---EDQLKLNEQF 83 (286)
T ss_dssp HHHHHHHHHHHHHTTTCCSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCCH---HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH---HHHHHHHHHC
T ss_conf 999999999999704899988998379987889999999999999872778606763567777888---9999985213
No 33
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}
Probab=54.71 E-value=4.6 Score=16.49 Aligned_cols=119 Identities=16% Similarity=0.187 Sum_probs=57.9
Q ss_pred HHHCCCCCEEEECCCCHHHHHHHHHHHHC-----CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHH
Q ss_conf 98415683489705883689999999851-----6955179887788898287799999999971984798345999999
Q T0542 321 VAKNGFRSVLIGLSGGIDSALVAAIACDA-----LGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDA 395 (590)
Q Consensus 321 ~~~~g~~~~viglSGGiDS~~~~~la~~a-----~g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~~i~i~~~~~~ 395 (590)
.+++|.+.--+.-.+---+.+.+.-+.++ +.++.|=.|.+-+..........|..+++.||.+...++|.....+
T Consensus 32 ~~~~Gi~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~~~~~di~~~C~g 111 (172)
T d1ub7a1 32 VTRTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKAFAYDLLAGCPG 111 (172)
T ss_dssp HHHTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCCCEEEEEECSTTH
T ss_pred HHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEHHCCCC
T ss_conf 76439405620010464127888888878866276432211899951466523356599998875067621400302453
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHH-HCCEEEECCCHHHHHHHH-----HHHCCCCCCCH
Q ss_conf 998618357406655565789999999976-197898748667775520-----33306771112
Q T0542 396 YMASLGLTGLAEENLQSRLRGTTLMAISNQ-EGHIVLAPGNKSELAVGY-----STLYGDSVGAY 454 (590)
Q Consensus 396 ~~~~~~~~~~~~~N~qaR~R~~~l~~~a~~-~~~lvl~t~n~sE~~lG~-----~t~~Gd~~~~~ 454 (590)
+...+.. ...|.-++. ...||++....|- .+-| ..++||+++..
T Consensus 112 ~~~al~~--------------a~~~~~~~~~~~~Lvv~~e~~S~-~~~~~d~~~~~lfGDgAaA~ 161 (172)
T d1ub7a1 112 WIYALAQ--------------AHALVEAGLAQKVLAVGAEALSK-IIDWNDRATAVLFGDGGGAA 161 (172)
T ss_dssp HHHHHHH--------------HHHHHHTTSCSEEEEEEEECGGG-TSCTTCHHHHTTBCCEEEEE
T ss_pred HHHHHHH--------------HHHHHHCCCCCEEEEECCCCCCC-CCCCCCCCEEEEECCEEEEE
T ss_conf 8889999--------------86154169854468961230236-56877867679865023999
No 34
>d2gnpa1 c.124.1.8 (A:56-317) Transcriptional regulator SP0247 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=54.25 E-value=5.5 Score=16.01 Aligned_cols=135 Identities=13% Similarity=0.036 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCC---CCCEEEEECCC----CCCCHHHHHHHHHHHH
Q ss_conf 5578899999999999841568348970588368999999985169---55179887788----8982877999999999
Q T0542 306 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALG---AQNVYGVSMPS----KYSSDHSKGDAAELAR 378 (590)
Q Consensus 306 ~e~~~~a~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~~a~g---~~~v~~~~mp~----~~~s~~~~~~a~~la~ 378 (590)
.+.+.+.+...-.+|+.+.=.++-+||+|.| +++.+. + +.+. ..++.-|-|-+ ......+.+-+..+|+
T Consensus 33 ~~~~~~~l~~~aA~~l~~~l~~~~~iGvswG--~Tl~~~-~-~~l~~~~~~~~~vv~l~Gg~~~~~~~~~~~~i~~~lA~ 108 (262)
T d2gnpa1 33 PTILSERISQVAAGVLRNLIDDNMKIGFSWG--KSLSNL-V-DLIHSKSVRNVHFYPLAGGPSHIHAKYHVNTLIYEMSR 108 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCEEEECCS--HHHHHH-H-HHCCCCCCSSCEEEESBCCCTTSCGGGSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEECC--HHHHHH-H-HHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 6789999999999999984778988999278--889999-9-97076566774599405776777665689999999999
Q ss_pred HCCCCEEEECHHHHH------HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCC
Q ss_conf 719847983459999------99998618357406655565789999999976197898748667775520333067711
Q T0542 379 RTGLNFRTVSIEPMF------DAYMASLGLTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVG 452 (590)
Q Consensus 379 ~lg~~~~~i~i~~~~------~~~~~~~~~~~~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~sE~~lG~~t~~Gd~~~ 452 (590)
.+|.++..++.-..+ +.+.+.- .++ -.+..+....-.++|-|+..+...-+.
T Consensus 109 ~~~~~~~~l~aP~~~~s~~~~~~l~~~~------------~i~--~v~~~~~~~dvai~GIG~~~~~~~~~~-------- 166 (262)
T d2gnpa1 109 KFHGECTFMNATIVQENKLLADGILQSR------------YFE--NLKNSWKDLDIAVVGIGDFSNKGKHQW-------- 166 (262)
T ss_dssp HHTCEECCCCSCSBCSSHHHHHHHHTST------------TTH--HHHHHTTSCSEEEECCEECSHHHHHTT--------
T ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHCH------------HHH--HHHHHHHCCCEEEEECCCCCCCCCCCC--------
T ss_conf 9499700445776779999999998586------------999--999997338989994456777664023--------
Q ss_pred CHHHCCCCCHHHHHHHHH
Q ss_conf 122306887889999999
Q T0542 453 AYGPIKDVYKTSIFRLAE 470 (590)
Q Consensus 453 ~~~p~~~l~Kt~v~~la~ 470 (590)
-+-+.+.++..|.+
T Consensus 167 ----~~~~~~~~~~~l~~ 180 (262)
T d2gnpa1 167 ----LDMLTEDDFKELTK 180 (262)
T ss_dssp ----TTTSCHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHH
T ss_conf ----78999899999997
No 35
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]}
Probab=53.02 E-value=5.7 Score=15.88 Aligned_cols=73 Identities=11% Similarity=0.012 Sum_probs=31.4
Q ss_pred HHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEE-EEECCCCCC-----------CHHHHHHHHHHHHHCCCC
Q ss_conf 99999984156834897058836899999998516955179-887788898-----------287799999999971984
Q T0542 316 GLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVY-GVSMPSKYS-----------SDHSKGDAAELARRTGLN 383 (590)
Q Consensus 316 ~l~d~~~~~g~~~~viglSGGiDS~~~~~la~~a~g~~~v~-~~~mp~~~~-----------s~~~~~~a~~la~~lg~~ 383 (590)
+|.+-+++..-+ +.=|+-|==+.+++++-.+---.+++. -+.|-+.+. --.+.+.|+.+-+. |++
T Consensus 105 ~i~~~~~~~~~~--vtiva~GPLTNiA~al~~~P~~~~~i~~iviMGG~~~~gn~~~~aEfN~~~DPeAA~~Vl~s-~~~ 181 (308)
T d1q8fa_ 105 YIIDTLMASDGD--ITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTS-GVP 181 (308)
T ss_dssp HHHHHHHHSCSC--EEEEECSCSHHHHHHHHHCGGGGGGEEEEEEECCCSSCCSSSSSCCHHHHTCHHHHHHHHTS-CSC
T ss_pred HHHHHHHHCCCC--EEEEECCCCHHHHHHHHHCHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHC-CCC
T ss_conf 999999858996--59996365117889977592988753425893235778888846000478666677788525-995
Q ss_pred EEEECHHH
Q ss_conf 79834599
Q T0542 384 FRTVSIEP 391 (590)
Q Consensus 384 ~~~i~i~~ 391 (590)
...++.+-
T Consensus 182 i~~vpldv 189 (308)
T d1q8fa_ 182 LVMMGLDL 189 (308)
T ss_dssp EEEECHHH
T ss_pred EEECCCCC
T ss_conf 47636765
No 36
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]} SCOP: d1kicb_ d1hoza_ d1hozb_ d2ff2a1 d1r4fa_
Probab=44.81 E-value=7.6 Score=15.06 Aligned_cols=75 Identities=16% Similarity=0.038 Sum_probs=37.7
Q ss_pred HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH--HCCCCCCE-EEEECCCCC-----------------CCHHHHHHH
Q ss_conf 9999999984156834897058836899999998--51695517-988778889-----------------828779999
Q T0542 314 VVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIAC--DALGAQNV-YGVSMPSKY-----------------SSDHSKGDA 373 (590)
Q Consensus 314 ~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~--~a~g~~~v-~~~~mp~~~-----------------~s~~~~~~a 373 (590)
+..|.+-+++.. +=+.-++-|==+.++++|.. ..+ +++| .-+.|-+.. +--.+.+.|
T Consensus 118 ~~~i~~~~~~~~--~~itiv~iGPLTNiA~al~~~~p~~-~~~i~~iviMGG~~~~~GNv~~~~~~~~aEfN~~~DPeAA 194 (327)
T d1kica_ 118 QQLLADLVMNSE--EKVTICVTGPLSNVAWCIDKYGEKF-TSKVEECVIMGGAVDVRGNVFLPSTDGTAEWNIYWDPASA 194 (327)
T ss_dssp HHHHHHHHHTCS--SCEEEEECSCTHHHHHHHHHHTHHH-HTTEEEEEEECCCSSSCCSCCCTTCCSCCCHHHHHCHHHH
T ss_pred HHHHHHHHHHCC--CCEEEEEECHHHHHHHHHHHHHHHH-HHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHH
T ss_conf 999999998379--9749997120568999999734787-7404589885464458876455788861024311160789
Q ss_pred HHHHHHCCCCEEEECHHH
Q ss_conf 999997198479834599
Q T0542 374 AELARRTGLNFRTVSIEP 391 (590)
Q Consensus 374 ~~la~~lg~~~~~i~i~~ 391 (590)
+.+-+.-|++...++.+-
T Consensus 195 ~~V~~~~~~~i~lvpldv 212 (327)
T d1kica_ 195 KTVFGCPGLRRIMFSLDS 212 (327)
T ss_dssp HHHHTCTTCCEEEECHHH
T ss_pred HHHHHCCCCCEEEECHHH
T ss_conf 999833899789965343
No 37
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=38.50 E-value=7 Score=15.29 Aligned_cols=36 Identities=6% Similarity=0.077 Sum_probs=24.0
Q ss_pred CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 845899996067416889999999999999996799699826
Q T0542 3 LQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFP 44 (590)
Q Consensus 3 ~~mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~gadLVVfP 44 (590)
|+.||.++ .|+.++.+...++++.+.+..+|+||+-
T Consensus 1 ~~~ri~~i------sD~h~~~~~l~~l~~~~~~~~~D~vli~ 36 (257)
T d2yvta1 1 MPRKVLAI------KNFKERFDLLPKLKGVIAEKQPDILVVV 36 (257)
T ss_dssp CCCEEEEE------ECCTTCGGGHHHHHHHHHHHCCSEEEEE
T ss_pred CCCEEEEE------ECCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 98489999------4899997899999998856599999991
No 38
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=30.57 E-value=13 Score=13.60 Aligned_cols=62 Identities=15% Similarity=0.018 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 999999999999996799699826400378881233310688999999999999986520108818998321
Q T0542 21 GNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFVEASRTALRELAARLAEEGFGELPVLVGYL 92 (590)
Q Consensus 21 ~N~~ki~~~i~~A~~~gadLVVfPEl~ltGY~~~Dl~~~~~~~~~~~~~l~~la~~~~~~~~~~i~ivvG~~ 92 (590)
...+.+.+.++.|.++++|+|++ ++|+|............+......+.... ..+.++.|..
T Consensus 24 ~~~~~l~~iv~~a~~~~~D~vli---------~GDlfd~~~~~~~~~~~~~~~~~~l~~~~-i~v~~i~GNH 85 (333)
T d1ii7a_ 24 EFAEAFKNALEIAVQENVDFILI---------AGDLFHSSRPSPGTLKKAIALLQIPKEHS-IPVFAIEGNH 85 (333)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEE---------ESCSBSSSSCCHHHHHHHHHHHHHHHTTT-CCEEEECCTT
T ss_pred HHHHHHHHHHHHHHHCCCCEEEE---------CCCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEECCCC
T ss_conf 99999999999998739999998---------78988899799999999999976687539-8099967887
No 39
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=27.22 E-value=14 Score=13.22 Aligned_cols=77 Identities=13% Similarity=0.239 Sum_probs=40.3
Q ss_pred HHHHHHHHCCC-CCEEEECCCCHHH--HHHHHHHHHCC----CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 99999984156-8348970588368--99999998516----95517988778889828779999999997198479834
Q T0542 316 GLRAYVAKNGF-RSVLIGLSGGIDS--ALVAAIACDAL----GAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVS 388 (590)
Q Consensus 316 ~l~d~~~~~g~-~~~viglSGGiDS--~~~~~la~~a~----g~~~v~~~~mp~~~~s~~~~~~a~~la~~lg~~~~~i~ 388 (590)
...+++...+. .-++|||+|+.-| |++|.+....| +..+|..+.|-+++-+..... .+.+..+-|.. ...|
T Consensus 67 ~~~~fl~~~~~k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~~~~~~l~-~~~~~~~~g~P-es~D 144 (308)
T d1sq5a_ 67 VLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLK-ERGLMKKKGFP-ESYD 144 (308)
T ss_dssp HHHHHHTCC-CCCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGBCCHHHHH-HHTCTTCTTSG-GGBC
T ss_pred HHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHH-HHCCCCCCCCH-HHHH
T ss_conf 999985344789988999968999987689999999973046899659995215689845888-83687668816-7631
Q ss_pred HHHHHH
Q ss_conf 599999
Q T0542 389 IEPMFD 394 (590)
Q Consensus 389 i~~~~~ 394 (590)
++.+.+
T Consensus 145 ~~~L~~ 150 (308)
T d1sq5a_ 145 MHRLVK 150 (308)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 40
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=27.09 E-value=15 Score=13.21 Aligned_cols=22 Identities=32% Similarity=0.191 Sum_probs=12.4
Q ss_pred EEECCCCHHH--HHHHHHHHHCCC
Q ss_conf 8970588368--999999985169
Q T0542 330 LIGLSGGIDS--ALVAAIACDALG 351 (590)
Q Consensus 330 viglSGGiDS--~~~~~la~~a~g 351 (590)
+|||+||+-| +++|.+.++.+|
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g 26 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYS 26 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 999979999889999999998689
No 41
>d2o0ma1 c.124.1.8 (A:95-341) Transcriptional regulator EF1965 {Enterococcus faecalis [TaxId: 1351]}
Probab=26.47 E-value=15 Score=13.14 Aligned_cols=119 Identities=18% Similarity=0.224 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCC-EEEECCCCHHHHHHHHHHHHCCCC-----CCEEEEECC---CCCCCHHHHHHHHHH
Q ss_conf 55788999999999998415683-489705883689999999851695-----517988778---889828779999999
Q T0542 306 DEEVYSALVVGLRAYVAKNGFRS-VLIGLSGGIDSALVAAIACDALGA-----QNVYGVSMP---SKYSSDHSKGDAAEL 376 (590)
Q Consensus 306 ~e~~~~a~~~~l~d~~~~~g~~~-~viglSGGiDS~~~~~la~~a~g~-----~~v~~~~mp---~~~~s~~~~~~a~~l 376 (590)
.+++.+.+.....+|+.+.-.++ .+||+|+| |++. +++ +.+.+ .++..|-+- ....+......+..+
T Consensus 26 ~~~~~~~l~~~aa~~L~~~l~~~~~~ig~s~G--~T~~-~~~-~~l~~~~~~~~~~~~v~l~G~~~~~~~~~~~~~~~~l 101 (247)
T d2o0ma1 26 QKKVLSDFGDVLTNTLNLLLPNGENTIAVMGG--TTMA-MVA-ENMGSLETEKRHNLFVPARGGIGEAVSVQANSISAVM 101 (247)
T ss_dssp CTHHHHHHHHHHHHHHHHHCCSEEEEEEECCS--HHHH-HHH-HTCCCCCCSSEEEEEEESBSCCCCCGGGSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC--HHHH-HHH-HHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf 19999999999999999870149869999677--7999-999-9714025776743899446578888776899999999
Q ss_pred HHHCCCCEEEECHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHH
Q ss_conf 9971984798345999999-9986183574066555657899999999761978987486677
Q T0542 377 ARRTGLNFRTVSIEPMFDA-YMASLGLTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSE 438 (590)
Q Consensus 377 a~~lg~~~~~i~i~~~~~~-~~~~~~~~~~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~sE 438 (590)
|+.++.++..++.-..++. ....+- ..+.+| -.+..+....-.++|=|.-+.
T Consensus 102 a~~~~~~~~~l~aP~~~~~e~~~~l~----~e~~i~------~~l~~~~~~Dial~GIG~~~~ 154 (247)
T d2o0ma1 102 ANKTGGNYRALYVPEQLSRETYNSLL----QEPSIQ------EVLTLISHANCVVHSIGRALH 154 (247)
T ss_dssp HHHHTCEECCCCCCSSCCHHHHHHHH----TCHHHH------HHHHHHHTCSEEEECCEEHHH
T ss_pred HHHCCCCHHEECCCCCCCHHHHHHHH----HCHHHH------HHHHHCCCCCEEEEECCCCCC
T ss_conf 97619970004588778779999998----676899------999845677989995688874
No 42
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
Probab=26.45 E-value=15 Score=13.13 Aligned_cols=25 Identities=12% Similarity=-0.019 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 9999999999996799699826400
Q T0542 23 AEAILRWTRHSAEQGAHLVAFPEMA 47 (590)
Q Consensus 23 ~~ki~~~i~~A~~~gadLVVfPEl~ 47 (590)
.+|+..+.+.-...++|||+|.|..
T Consensus 25 ~~r~~~i~~~i~~~~~DIi~LQEv~ 49 (299)
T d2ddra1 25 TERADLIGAADYIKNQDVVILNEVF 49 (299)
T ss_dssp HHHHHHHHHCSTTCSCSEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 8999999999875699889999267
No 43
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=26.17 E-value=15 Score=13.10 Aligned_cols=45 Identities=16% Similarity=0.259 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH--HHHH--CCCCCCEEE
Q ss_conf 99999999984156834897058836899999--9985--169551798
Q T0542 313 LVVGLRAYVAKNGFRSVLIGLSGGIDSALVAA--IACD--ALGAQNVYG 357 (590)
Q Consensus 313 ~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~--la~~--a~g~~~v~~ 357 (590)
.+.-+.+.+.+.+.+++++=+|.=+|.-+-.+ +... .|.+.+|+|
T Consensus 97 i~~~v~~~i~~~~p~aivivvtNPvD~m~~~~~~v~~~~~~l~~~RviG 145 (145)
T d2cmda1 97 IVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFG 145 (145)
T ss_dssp HHHHHHHHHHHHCTTSEEEECSSSHHHHHHHHHHHHHHTTCCCGGGEEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHCCC
T ss_conf 9999999998637786899836971487999999998757997541649
No 44
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}
Probab=25.61 E-value=11 Score=14.08 Aligned_cols=40 Identities=18% Similarity=0.118 Sum_probs=24.7
Q ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 45899996067416889999999999999996799699826400378
Q T0542 4 QLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTG 50 (590)
Q Consensus 4 ~mkIAlaQ~~~~~gD~~~N~~ki~~~i~~A~~~gadLVVfPEl~ltG 50 (590)
++||. |.|..-+ . .+..++.+...+.++|+|++.|.+.++
T Consensus 2 p~rV~--~~Nv~~~--~---~~~~~l~~~i~~~~~DIi~lQE~~~~~ 41 (228)
T d1wdua_ 2 PYRVL--QANLQRK--K---LATAELAIEAATRKAAIALIQEPYVGG 41 (228)
T ss_dssp CEEEE--EEECTTC--H---HHHHHHHHHHHHHTCSEEEEESCCC--
T ss_pred CEEEE--EECCCCC--H---HHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 87899--4203997--6---789999999973699789998787489
No 45
>d1gpja3 d.58.39.1 (A:1-143) Glutamyl tRNA-reductase catalytic, N-terminal domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=25.27 E-value=6.1 Score=15.70 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=15.4
Q ss_pred HHHHHCCEEEECCCHHHHHH
Q ss_conf 99761978987486677755
Q T0542 422 ISNQEGHIVLAPGNKSELAV 441 (590)
Q Consensus 422 ~a~~~~~lvl~t~n~sE~~l 441 (590)
.....+.++|+|+|++|...
T Consensus 36 ~~~~~e~vvLsTCNRtEiY~ 55 (143)
T d1gpja3 36 SFGLSGSVLLQTSNRVEVYA 55 (143)
T ss_dssp HHTCSEEEEEEETTEEEEEE
T ss_pred CCCCCEEEEEEECCCEEEEE
T ss_conf 36986079987427758998
No 46
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.83 E-value=17 Score=12.82 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHCC------CCCEEEECCCCHHHHHH
Q ss_conf 55788999999999998415------68348970588368999
Q T0542 306 DEEVYSALVVGLRAYVAKNG------FRSVLIGLSGGIDSALV 342 (590)
Q Consensus 306 ~e~~~~a~~~~l~d~~~~~g------~~~~viglSGGiDS~~~ 342 (590)
.+++.+.+...+.+.+++.+ ...+.+|++| +|+.-.
T Consensus 42 ~~~~~~~i~~~i~~~l~~~~~~~~~~i~~i~~GlAG-~~~~~~ 83 (117)
T d2ch5a2 42 TDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSG-GDQEDA 83 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETT-TTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC-CCCCHH
T ss_conf 899999999999999987168877550389999633-686046
No 47
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.08 E-value=17 Score=12.72 Aligned_cols=11 Identities=64% Similarity=1.005 Sum_probs=6.1
Q ss_pred EEEECCCCHHH
Q ss_conf 48970588368
Q T0542 329 VLIGLSGGIDS 339 (590)
Q Consensus 329 ~viglSGGiDS 339 (590)
+||||+||+-|
T Consensus 3 ~iIgI~G~~gS 13 (213)
T d1uj2a_ 3 FLIGVSGGTAS 13 (213)
T ss_dssp EEEEEECSTTS
T ss_pred EEEEEECCCCC
T ss_conf 89999899978
No 48
>d1o60a_ c.1.10.4 (A:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Haemophilus influenzae [TaxId: 727]}
Probab=22.97 E-value=17 Score=12.71 Aligned_cols=32 Identities=6% Similarity=0.031 Sum_probs=28.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 16889999999999999996799699826400
Q T0542 16 VGDIAGNAEAILRWTRHSAEQGAHLVAFPEMA 47 (590)
Q Consensus 16 ~gD~~~N~~ki~~~i~~A~~~gadLVVfPEl~ 47 (590)
.++.++-++.+.++++.|++.|||-|=||-..
T Consensus 27 ~~nh~g~l~~AkkLi~~A~~aGad~vKfQ~~~ 58 (281)
T d1o60a_ 27 LESRDMAMQVCEAYVKVTEKLGVPYVFKASFD 58 (281)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCEEEEEESC
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 44879999999999999998597979932413
No 49
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=22.50 E-value=18 Score=12.65 Aligned_cols=24 Identities=38% Similarity=0.588 Sum_probs=16.0
Q ss_pred CEEEECCCCHHH--HHHHHHHHHCCCC
Q ss_conf 348970588368--9999999851695
Q T0542 328 SVLIGLSGGIDS--ALVAAIACDALGA 352 (590)
Q Consensus 328 ~~viglSGGiDS--~~~~~la~~a~g~ 352 (590)
+++|||+||+-| +.++-+.. .+|-
T Consensus 3 k~iIgitG~igSGKStv~~~l~-~~G~ 28 (208)
T d1vhta_ 3 RYIVALTGGIGSGKSTVANAFA-DLGI 28 (208)
T ss_dssp CEEEEEECCTTSCHHHHHHHHH-HTTC
T ss_pred CEEEEEECCCCCCHHHHHHHHH-HCCC
T ss_conf 8799978988688999999999-8799
No 50
>d1dw0a_ a.3.1.1 (A:) SHP, an oxygen binding cytochrome c {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=22.00 E-value=18 Score=12.59 Aligned_cols=24 Identities=25% Similarity=0.045 Sum_probs=18.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 899899999999985156686378
Q T0542 536 YDRELVVKTLRMVDTAEYKRRQYP 559 (590)
Q Consensus 536 ~~~~~v~~~~~~~~~~~~KR~~~p 559 (590)
-|.+.|+||++|--..-+.|.|.|
T Consensus 76 tD~akVEKWF~RNC~dVlgReCTa 99 (112)
T d1dw0a_ 76 TDSARVEKWLGRNCNSVIGRDCTP 99 (112)
T ss_dssp CCHHHHHHHHHHHHHHHHSSCCCH
T ss_pred CCHHHHHHHHHHHCHHHHCCCCCH
T ss_conf 589999999972046666445677
No 51
>d1gpja3 d.58.39.1 (A:1-143) Glutamyl tRNA-reductase catalytic, N-terminal domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=21.92 E-value=7.7 Score=15.01 Aligned_cols=21 Identities=19% Similarity=0.324 Sum_probs=16.1
Q ss_pred HHHHHHHCCEEEECCCHHHHH
Q ss_conf 999976197898748667775
Q T0542 420 MAISNQEGHIVLAPGNKSELA 440 (590)
Q Consensus 420 ~~~a~~~~~lvl~t~n~sE~~ 440 (590)
....+..+.++|+|+|++|..
T Consensus 34 ~~~~~~~e~viLsTCNRtEiy 54 (143)
T d1gpja3 34 VESFGLSGSVLLQTSNRVEVY 54 (143)
T ss_dssp HHHHTCSEEEEEEETTEEEEE
T ss_pred HHHCCCCCEEEEECCCCEEEE
T ss_conf 850699807998618828999
No 52
>d1efpb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Paracoccus denitrificans [TaxId: 266]}
Probab=21.87 E-value=18 Score=12.57 Aligned_cols=10 Identities=30% Similarity=0.368 Sum_probs=5.4
Q ss_pred CCEEEEECCC
Q ss_conf 5179887788
Q T0542 353 QNVYGVSMPS 362 (590)
Q Consensus 353 ~~v~~~~mp~ 362 (590)
-+|..+..|.
T Consensus 219 ~~v~~~~~p~ 228 (246)
T d1efpb_ 219 LEVVSVREPE 228 (246)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEECCC
T ss_conf 6999984699
No 53
>d2okga1 c.124.1.8 (A:89-338) Central glycolytic gene regulator CggR {Bacillus subtilis [TaxId: 1423]}
Probab=21.02 E-value=19 Score=12.46 Aligned_cols=120 Identities=11% Similarity=0.135 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH--HCCCCCCEEEEECC---CCCCCHHHHHHHHHHHHHCCC
Q ss_conf 7889999999999984156834897058836899999998--51695517988778---889828779999999997198
Q T0542 308 EVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIAC--DALGAQNVYGVSMP---SKYSSDHSKGDAAELARRTGL 382 (590)
Q Consensus 308 ~~~~a~~~~l~d~~~~~g~~~~viglSGGiDS~~~~~la~--~a~g~~~v~~~~mp---~~~~s~~~~~~a~~la~~lg~ 382 (590)
++.+.+..+-.+|+.+.=.++-+||+|+|- ++.+..-. ......++.-|-+- +...+..+.+-+..+|+.+|.
T Consensus 34 ~~~~~l~~aaA~~L~~~l~~~~~igvswG~--T~~~~~~~l~~~~~~~~~~~V~l~G~~~~~~~~~~~~i~~~la~~~~~ 111 (250)
T d2okga1 34 WVKKEMGRAAVACMKKRFSGKNIVAVTGGT--TIEAVAEMMTPDSKNRELLFVPARGGLGEDVKNQANTICAHMAEKASG 111 (250)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEECCSH--HHHHHHHHCCCCTTCCEEEEEESEEECC---CCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCH--HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 999999999999999866799889995878--999999984110568872899821788877675999999999987299
Q ss_pred CEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHH
Q ss_conf 47983459999999986183574066555657899999999761978987486677
Q T0542 383 NFRTVSIEPMFDAYMASLGLTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSE 438 (590)
Q Consensus 383 ~~~~i~i~~~~~~~~~~~~~~~~~~~N~qaR~R~~~l~~~a~~~~~lvl~t~n~sE 438 (590)
++..++.-..++.- .. ..+.. +.-++ -.+..++...-.++|=|+.+.
T Consensus 112 ~~~~l~aP~~~~~~--~~--~~l~~---e~~i~--~~l~~~~~~Dial~GIG~~~~ 158 (250)
T d2okga1 112 TYRLLFVPGQLSQG--AY--SSIIE---EPSVK--EVLNTIKSASMLVHGIGEAKT 158 (250)
T ss_dssp EECCCCCCCSCCHH--HH--HHHHT---SHHHH--HHHHHHHTCSEEEECCEEHHH
T ss_pred CEEEECCCCCCCHH--HH--HHHHH---CHHHH--HHHHHHHCCCEEEEECCCCCC
T ss_conf 65644674447989--99--99986---87899--999973169999992686861
No 54
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.46 E-value=19 Score=12.38 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=18.1
Q ss_pred CCEEEECCCCHHH---HHHHHHHHHCCCCC--CEEEEECCCCC
Q ss_conf 8348970588368---99999998516955--17988778889
Q T0542 327 RSVLIGLSGGIDS---ALVAAIACDALGAQ--NVYGVSMPSKY 364 (590)
Q Consensus 327 ~~~viglSGGiDS---~~~~~la~~a~g~~--~v~~~~mp~~~ 364 (590)
+.++|||+|+.-| +++-.| .+.++.. .+..+.++..+
T Consensus 21 ~~~iIgI~G~~GSGKSTla~~L-~~~l~~~~~~~~~~~~~~~~ 62 (198)
T d1rz3a_ 21 GRLVLGIDGLSRSGKTTLANQL-SQTLREQGISVCVFHMDDHI 62 (198)
T ss_dssp SSEEEEEEECTTSSHHHHHHHH-HHHHHHTTCCEEEEEGGGGC
T ss_pred CCEEEEEECCCCCCHHHHHHHH-HHHHCCCCCCCEECCCCCCC
T ss_conf 9889997898878999999999-99836346652001220123
Done!