Query T0547 BR53, unknown, 611 residues
Match_columns 611
No_of_seqs 261 out of 901
Neff 5.4
Searched_HMMs 15564
Date Fri May 21 18:08:39 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0547.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0547.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hkva2 c.1.6.1 (A:46-310) Dia 100.0 0 0 387.5 26.6 256 51-330 1-265 (265)
2 d1twia2 c.1.6.1 (A:50-313) Dia 100.0 0 0 368.8 28.5 260 51-329 1-264 (264)
3 d1knwa2 c.1.6.1 (A:32-278) Dia 100.0 2.8E-42 0 335.9 24.0 241 51-330 1-247 (247)
4 d7odca2 c.1.6.1 (A:44-283) Euk 100.0 5.8E-41 4.2E-45 326.0 27.5 239 51-329 1-240 (240)
5 d1f3ta2 c.1.6.1 (A:44-283) Euk 100.0 6.8E-41 4.2E-45 325.5 27.7 238 52-329 2-240 (240)
6 d1f3ta1 b.49.2.3 (A:14-43,A:28 98.7 5.9E-09 3.8E-13 84.5 4.6 147 303-539 9-156 (169)
7 d1rcqa2 c.1.6.1 (A:8-233) Alan 98.7 5.5E-07 3.5E-11 69.6 13.8 169 51-260 2-175 (226)
8 d1hkva1 b.49.2.3 (A:2-45,A:311 98.6 2.2E-09 1.4E-13 87.7 0.5 150 306-561 23-177 (181)
9 d1vfsa2 c.1.6.1 (A:13-249) Ala 98.5 2.3E-05 1.5E-09 57.4 17.6 178 52-263 2-187 (237)
10 d7odca1 b.49.2.3 (A:2-43,A:284 98.4 8.4E-08 5.4E-12 75.8 3.1 94 439-539 74-168 (177)
11 d1knwa1 b.49.2.3 (A:2-31,A:279 98.4 8.5E-07 5.5E-11 68.2 8.0 88 468-562 79-169 (174)
12 d1twia1 b.49.2.3 (A:15-49,A:31 97.9 2.6E-06 1.7E-10 64.5 2.8 91 459-562 72-162 (170)
13 d1rcqa2 c.1.6.1 (A:8-233) Alan 97.6 0.0039 2.5E-07 40.6 16.2 149 51-236 2-154 (226)
14 d1bd0a2 c.1.6.1 (A:12-244) Ala 97.6 0.0039 2.5E-07 40.5 16.9 165 51-249 2-172 (233)
15 d1ct5a_ c.1.6.2 (A:) "Hypothet 62.8 4.4 0.00029 17.5 23.0 196 55-271 13-219 (244)
16 d1cg2a2 d.58.19.1 (A:214-326) 49.3 6.7 0.00043 16.1 2.8 94 227-323 10-111 (113)
17 d1w32a_ c.1.8.3 (A:) Xylanase 47.8 7.5 0.00048 15.8 7.5 60 208-275 190-253 (346)
18 d1tf3a3 g.37.1.1 (A:71-101) Tr 43.2 3.4 0.00022 18.4 0.5 16 480-495 2-17 (31)
19 d1ylea1 d.108.1.8 (A:1-338) Ar 41.4 9.3 0.00059 15.1 4.1 63 21-86 2-64 (338)
20 d2o57a1 c.66.1.18 (A:16-297) P 40.3 9.6 0.00062 14.9 3.5 56 124-183 66-122 (282)
21 d1dlca3 f.1.3.1 (A:61-289) del 39.1 5.9 0.00038 16.5 1.3 10 386-395 181-190 (229)
22 d1i60a_ c.1.15.4 (A:) Hypothet 38.3 10 0.00066 14.7 13.1 92 211-321 48-143 (278)
23 d1kpga_ c.66.1.18 (A:) CmaA1 { 33.3 12 0.00078 14.2 2.7 55 124-182 61-116 (285)
24 d1r85a_ c.1.8.3 (A:) Xylanase 33.0 12 0.00079 14.1 6.2 33 210-243 205-238 (371)
25 d1vlba4 d.133.1.1 (A:311-907) 32.8 11 0.00068 14.6 1.7 68 118-193 89-166 (597)
26 d1iu8a_ c.56.4.1 (A:) Pyrrolid 30.6 3.5 0.00023 18.2 -1.0 10 88-97 17-26 (206)
27 d1n82a_ c.1.8.3 (A:) Xylanase 29.6 14 0.00089 13.7 5.3 36 210-245 188-223 (330)
28 d1yhta1 c.1.8.6 (A:16-359) Dis 29.0 14 0.00091 13.7 2.1 29 158-193 77-105 (344)
29 d1f86a_ b.3.4.1 (A:) Transthyr 27.7 15 0.00096 13.5 3.0 75 465-551 23-102 (115)
30 d1rrma_ e.22.1.2 (A:) Lactalde 25.9 16 0.001 13.3 6.7 80 14-102 4-84 (385)
31 d1us3a2 c.1.8.3 (A:243-606) Xy 24.8 17 0.0011 13.1 5.3 61 208-275 201-262 (364)
32 d2amxa1 c.1.9.1 (A:20-376) Ade 24.3 17 0.0011 13.1 7.9 36 560-596 321-356 (357)
33 d1v0la_ c.1.8.3 (A:) Xylanase 23.9 17 0.0011 13.0 3.6 10 213-222 65-74 (302)
34 d2v4jb2 d.58.36.2 (B:2-135) Di 23.5 16 0.001 13.3 1.3 59 206-277 72-131 (134)
35 d1ybha3 c.36.1.9 (A:460-667) A 22.4 18 0.0012 12.8 7.2 15 156-170 155-169 (208)
36 d1mp9a1 d.129.1.1 (A:5-96) TAT 22.3 18 0.0012 12.8 2.8 22 123-144 59-80 (92)
37 d1ciya3 f.1.3.1 (A:33-255) del 21.9 7 0.00045 16.0 -0.8 12 210-221 43-54 (223)
38 d2ji7a3 c.36.1.9 (A:370-552) O 21.6 19 0.0012 12.7 4.5 15 238-252 150-164 (183)
39 d1auga_ c.56.4.1 (A:) Pyrrolid 21.6 9.9 0.00064 14.8 -0.1 13 231-243 136-148 (210)
40 d1iofa_ c.56.4.1 (A:) Pyrrolid 21.5 10 0.00064 14.8 -0.1 12 86-97 15-26 (208)
41 d1ja1a2 c.23.5.2 (A:63-239) NA 21.0 20 0.0013 12.6 1.4 81 207-307 83-169 (177)
42 d1b6ra1 b.84.2.1 (A:277-355) N 20.9 20 0.0013 12.6 1.9 42 123-172 20-61 (79)
43 d1kpia_ c.66.1.18 (A:) CmaA2 { 20.9 20 0.0013 12.6 3.0 59 122-183 57-116 (291)
44 d1qnaa1 d.129.1.1 (A:17-115) T 20.8 20 0.0013 12.6 1.4 21 124-144 58-78 (99)
45 d1ur1a_ c.1.8.3 (A:) Xylanase 20.5 20 0.0013 12.5 5.3 58 208-273 183-242 (350)
No 1
>d1hkva2 c.1.6.1 (A:46-310) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=0 Score=387.46 Aligned_cols=256 Identities=20% Similarity=0.286 Sum_probs=224.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCEE
Q ss_conf 47999999999999999999970889872378745337878999999984666785166228899999996489988178
Q T0547 51 FPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPIT 130 (611)
Q Consensus 51 f~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~~~Ii 130 (611)
+++.||+|++++++||. +.+++.||+|||+++.|++.+.+.| +|+||+|.+||.+|+++|+++++|+
T Consensus 1 D~~~lr~~~~~~~~af~---------~~~~i~YA~KaN~~~~vl~~l~~~G----~g~dvaS~~El~~al~~G~~~~~Ii 67 (265)
T d1hkva2 1 DEDDFRSRCRETAAAFG---------SGANVHYAAKAFLCSEVARWISEEG----LCLDVCTGGELAVALHASFPPERIT 67 (265)
T ss_dssp EHHHHHHHHHHHHHHTT---------SGGGBEEEGGGSCCHHHHHHHHHHT----CEEEECSHHHHHHHHHTTCCGGGEE
T ss_pred CHHHHHHHHHHHHHHCC---------CCCEEEEEECCCCCHHHHHHHHHCC----CCEEEECHHHHHHHHHCCCCHHHHE
T ss_conf 97999999999998569---------9986998863389999999999749----9759867515999998289989923
Q ss_pred ECC-CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC-CCCCCCCCCCCCCCH
Q ss_conf 788-989999999985423571048986688999999999998469862268888507887764-220466656478898
Q T0547 131 VNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGI-WAKSGGINSKFGLTS 208 (611)
Q Consensus 131 ~nG-~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~-~~~Tgg~~SKFGl~~ 208 (611)
|+| +|++++|++|+.. |.. .+++||++||++|.+++++ .++.++|++|+||++...++ |..+|+..||||++.
T Consensus 68 ~~gp~K~~~~l~~Al~~---gv~-~i~vDs~~El~~i~~~~~~-~~~~~~v~lr~~p~~~~~~~~~~~~g~~~skFG~~~ 142 (265)
T d1hkva2 68 LHGNNKSVSELTAAVKA---GVG-HIVVDSMTEIERLDAIAGE-AGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSV 142 (265)
T ss_dssp ECCSSCCHHHHHHHHHH---TCC-CEEECSHHHHHHHHHHHHH-HTCCEEEEEEEECSEEEEETEEEECSSCCSSSSEES
T ss_pred ECCCCCHHHHHHHHHHC---CCC-CCCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCH
T ss_conf 35521003567889863---855-1114542789999988652-033423122333101244333110255334456523
Q ss_pred HH--HHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCCCEEEEECCCCCCCCCCC
Q ss_conf 99--9999999986689873478886338876788999999999999999999-----7179940587245565547777
Q T0547 209 TE--LIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELR-----KMGAKNLKAINLGGGLAVEYSQ 281 (611)
Q Consensus 209 ~e--i~~~i~~l~~~~~l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~-----~~g~~~l~~LDIGGGlgV~Y~~ 281 (611)
++ .+..+.++...+.+ .+.|||||+|||+.++..|..+++++.+++.++. +.| .++++||+||||||+|..
T Consensus 143 ~~~~~~~~~~~~~~~~~l-~~~GlH~HvGSq~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g-~~l~~ldiGGG~~v~y~~ 220 (265)
T d1hkva2 143 ASGAAMAAVRRVFATDHL-RLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKT-AQIATVDLGGGLGISYLP 220 (265)
T ss_dssp TTSHHHHHHHHHHHCSSE-EEEEEECCCEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHS-TTCCEEECCCCBCCCSST
T ss_pred HHHHHHHHHHHHHHHCCC-EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEECCCCCCCCCC
T ss_conf 466789999999861673-266655541102344588999999999887767887788608-886446545877866788
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCC
Q ss_conf 7777777888899999999999999996489987788707567775041
Q T0547 282 FKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHA 330 (611)
Q Consensus 282 ~~~~~s~ny~l~eya~~Iv~~i~~~c~~~~vp~P~Ii~EpGRaivA~~~ 330 (611)
++.+. ++++|+..+...+++.|...+.+.|+|++||||||||+++
T Consensus 221 ~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~l~~EPGR~lvg~~t 265 (265)
T d1hkva2 221 SDDPP----PIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGT 265 (265)
T ss_dssp TCCCC----CHHHHHHHHHHHHHHHHHTTTCCCCEEEBCCSHHHHSTTE
T ss_pred CCCCC----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCC
T ss_conf 88899----9999999999999999986299997899918525325899
No 2
>d1twia2 c.1.6.1 (A:50-313) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=0 Score=368.79 Aligned_cols=260 Identities=26% Similarity=0.396 Sum_probs=227.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCEE
Q ss_conf 47999999999999999999970889872378745337878999999984666785166228899999996489988178
Q T0547 51 FPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPIT 130 (611)
Q Consensus 51 f~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~~~Ii 130 (611)
.++.||.+++++.+||+++..+.+ .+++++||+|||+++.|++.+.+.| +|+||+|++||.+|+++|+++.+|+
T Consensus 1 s~~~i~~n~~~~~~af~~~~~~~g--~~~~i~YAvKaN~~~~vl~~l~~~G----~g~Dv~S~~El~~al~~G~~~~~I~ 74 (264)
T d1twia2 1 SEEQIKINYNRYIEAFKRWEEETG--KEFIVAYAYKANANLAITRLLAKLG----CGADVVSGGELYIAKLSNVPSKKIV 74 (264)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHS--CCEEEEEEGGGCCCHHHHHHHHHTT----CEEEECSHHHHHHHHHTTCCGGGEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCC--CCEEEEEEECCCCCHHHHHHHHHCC----CCEEEECCCHHHHHHHCCCCCCCCC
T ss_conf 979999999999999999888519--9669998845689899999999829----9805625148988764179743344
Q ss_pred ECC-CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC-CCCCCCCCCCCCCCH
Q ss_conf 788-989999999985423571048986688999999999998469862268888507887764-220466656478898
Q T0547 131 VNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGI-WAKSGGINSKFGLTS 208 (611)
Q Consensus 131 ~nG-~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~-~~~Tgg~~SKFGl~~ 208 (611)
||| +|+.++|+.|+. .|.+ .+++||.+||+++.+++.+ .+..+++++|++|.....++ +..|++..||||++.
T Consensus 75 ~~gp~k~~~~i~~a~~---~gv~-~~~~ds~~el~~i~~~a~~-~~~~~~v~~Ri~~~~~~~~~~~~~~~~~~skfG~~~ 149 (264)
T d1twia2 75 FNGNCKTKEEIIMGIE---ANIR-AFNVDSISELILINETAKE-LGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDV 149 (264)
T ss_dssp ECCSSCCHHHHHHHHH---TTCS-EEEECSHHHHHHHHHHHHH-HTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEES
T ss_pred CCCCHHHHHHHHHHHC---CEEE-EEECCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 6785467888877432---3121-0000105788888888987-099832110224577744454301455334566627
Q ss_pred HH--HHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 99--9999999986689873478886338876788999999999999999999717994058724556554777777777
Q T0547 209 TE--LIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEK 286 (611)
Q Consensus 209 ~e--i~~~i~~l~~~~~l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~~~l~~LDIGGGlgV~Y~~~~~~~ 286 (611)
++ ...+..+..+...+ .+.|+|||+|||+.++..|..+++++.+++.++++.|. ++++||+||||||+|...+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~l-~~~GlH~H~gS~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~ldiGGGf~v~y~~~~~~~ 227 (264)
T d1twia2 150 ESGIAMKAIKMALEMEYV-NVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGI-EIEDVNLGGGLGIPYYKDKQIP 227 (264)
T ss_dssp TTSHHHHHHHHHHHCSSE-EEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHHHTTC-CCSEEECCCCBCCCSSSSSCCC
T ss_pred HHHHHHHHHHHHHHHCCC-CCCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEECCCCCCCCCCCCCCC
T ss_conf 777889999999873134-43440232010234426689999999999999998399-8657761377465678888999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCC
Q ss_conf 7788889999999999999999648998778870756777504
Q T0547 287 SRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANH 329 (611)
Q Consensus 287 s~ny~l~eya~~Iv~~i~~~c~~~~vp~P~Ii~EpGRaivA~~ 329 (611)
++++|+..|...+++.+ .+.+.|+|++||||||||.+
T Consensus 228 ----~~~~~~~~i~~~l~~~~--~~~~~~~l~~EPGR~lva~A 264 (264)
T d1twia2 228 ----TQKDLADAIINTMLKYK--DKVEMPNLILEPGRSLVATA 264 (264)
T ss_dssp ----CHHHHHHHHHHHHHTTT--TTSCCCEEEECCSHHHHGGG
T ss_pred ----CHHHHHHHHHHHHHHHC--CCCCCCEEEECCCHHHEECC
T ss_conf ----99999999999999850--56899769990868982369
No 3
>d1knwa2 c.1.6.1 (A:32-278) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.8e-42 Score=335.91 Aligned_cols=241 Identities=23% Similarity=0.303 Sum_probs=199.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCC----
Q ss_conf 4799999999999999999997088987237874533787899999998466678516622889999999648998----
Q T0547 51 FPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEG---- 126 (611)
Q Consensus 51 f~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~---- 126 (611)
+.++||+|++.+++ | ..+.||+|||+++.|++.+.+.| +|+||+|.+||.+|+++|+++
T Consensus 1 D~~~ir~~~~~l~~-~------------~~v~YA~KaN~~~~vl~~l~~~G----~g~dv~S~~El~~al~~G~~~~~~~ 63 (247)
T d1knwa2 1 DAQIIRRQIAALKQ-F------------DVVRFAQKACSNIHILRLMREQG----VKVDSVSLGEIERALAAGYNPQTHP 63 (247)
T ss_dssp EHHHHHHHHHTTTT-S------------SEEEEEGGGCCCHHHHHHHHHTT----CEEEECSHHHHHHHHHTTCCTTTCT
T ss_pred CHHHHHHHHHHHCC-C------------CEEEEEECCCCCHHHHHHHHHCC----CCEEEECHHHHHHHHHHCCCCCCCH
T ss_conf 97999999997037-8------------98999710189899999999849----9789829999999998077755675
Q ss_pred CCEEECC-CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC-CCCCCCCCCCC
Q ss_conf 8178788-989999999985423571048986688999999999998469862268888507887764-22046665647
Q T0547 127 APITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGI-WAKSGGINSKF 204 (611)
Q Consensus 127 ~~Ii~nG-~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~-~~~Tgg~~SKF 204 (611)
++|+|+| +|+.++++.|+. .| +.+++||++||+++.+++ ..+++++|++|.....++ ...|++..|||
T Consensus 64 ~~Ii~~g~~k~~~~l~~a~~---~~--~~i~~ds~~el~~l~~~~-----~~~~i~lRinp~~~~~~~~~~~~~~~~sKF 133 (247)
T d1knwa2 64 DDIVFTADVIDQATLERVSE---LQ--IPVNAGSVDMLDQLGQVS-----PGHRVWLRVNPGFGHGHSQKTNTGGENSKH 133 (247)
T ss_dssp TSEEEEESCCCHHHHHHHHH---HT--CCEEESSHHHHHHHHHHS-----TTCEEEEEEECSCCSSCTTSCCSSSTTCCC
T ss_pred HHEEECCCCCHHHHHHHHHH---HH--HHHCHHHHHHHHHHHHHC-----CCCHHHEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 45253277310468999998---76--330101467899998642-----311232023236444455433332222455
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 88989999999999866898734788863388767889999999999999999997179940587245565547777777
Q T0547 205 GLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKN 284 (611)
Q Consensus 205 Gl~~~ei~~~i~~l~~~~~l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~~~l~~LDIGGGlgV~Y~~~~~ 284 (611)
|++.+++.++++.++..+. ++.|||||+|||+.+... .+.+..++..+.+.|. ++++||+||||||+|...+.
T Consensus 134 G~~~~~~~~~~~~~~~~~~--~l~GlH~HigSq~~~~~~----~~~~~~~~~~~~~~g~-~~~~ldiGGGf~v~y~~~~~ 206 (247)
T d1knwa2 134 GIWYTDLPAALDVIQRHHL--QLVGIHMHIGSGVDYAHL----EQVCGAMVRQVIEFGQ-DLQAISAGGGLSVPYQQGEE 206 (247)
T ss_dssp SEEGGGHHHHHHHHHHTTC--EEEEEECCCCCTTCHHHH----HHHHHHHHHHHHHHTC-CCSEEECCCCCCCCCSTTCC
T ss_pred CCCHHHHHHHHHHHHHCCC--CEEEEHHCCCCCCHHHHH----HHHHHHHHHHHHHCCC-CCEEEEECCCCCCCCCCCCC
T ss_conf 5440222456566552155--032202124765204678----9999998888863057-75188756851434777789
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCC
Q ss_conf 7777888899999999999999996489987788707567775041
Q T0547 285 EKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHA 330 (611)
Q Consensus 285 ~~s~ny~l~eya~~Iv~~i~~~c~~~~vp~P~Ii~EpGRaivA~~~ 330 (611)
+ +++++|++.+...++++++..+ ..|+|++|||||+||++|
T Consensus 207 ~----~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~EPGR~lva~aG 247 (247)
T d1knwa2 207 A----VDTEHYYGLWNAAREQIARHLG-HPVKLEIEPGRFLVAQSG 247 (247)
T ss_dssp C----CCHHHHHHHHHHHHHHHHHHHT-SCCEEEECCSHHHHGGGE
T ss_pred C----CCHHHHHHHHHHHHHHHHHHCC-CCCEEEEECCHHHHHCCC
T ss_conf 9----9999999999999999998559-998899938788772589
No 4
>d7odca2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=5.8e-41 Score=326.03 Aligned_cols=239 Identities=20% Similarity=0.264 Sum_probs=200.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCEE
Q ss_conf 47999999999999999999970889872378745337878999999984666785166228899999996489988178
Q T0547 51 FPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPIT 130 (611)
Q Consensus 51 f~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~~~Ii 130 (611)
+.|.|..|++++.++|+ ..+++||+|||+++.|++.+.+.| +|+||+|.+||.+|+++|+++++|+
T Consensus 1 dl~~i~~~~~~~~~~~p----------~v~~~YA~KaN~~~~il~~l~~~G----~g~dv~S~~El~~a~~aG~~~~~Iv 66 (240)
T d7odca2 1 DLGDILKKHLRWLKALP----------RVTPFYAVKCNDSRAIVSTLAAIG----TGFDCASKTEIQLVQGLGVPAERVI 66 (240)
T ss_dssp EHHHHHHHHHHHHHHCT----------TEEEEEEGGGCCCHHHHHHHHHHT----CEEEECSHHHHHHHHHTTCCGGGEE
T ss_pred CHHHHHHHHHHHHHHCC----------CCEEEEEECCCCCHHHHHHHHHCC----CCEEEECCHHHHHHHHCCCCCCCEE
T ss_conf 97899999999998689----------987988852389899999999839----9817624268999984499943037
Q ss_pred ECC-CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 788-9899999999854235710489866889999999999984698622688885078877642204666564788989
Q T0547 131 VNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTST 209 (611)
Q Consensus 131 ~nG-~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~~~~Tgg~~SKFGl~~~ 209 (611)
|+| +|++++|+.|+. .|.. ++++||.+|++++.+. ....++.+|+++... ..+++..+|||++.+
T Consensus 67 ~~g~~K~~~~l~~a~~---~g~~-~~~~ds~~el~~i~~~-----~~~~~v~~ri~~~~~-----~~~~~~~~kfG~~~~ 132 (240)
T d7odca2 67 YANPCKQVSQIKYAAS---NGVQ-MMTFDSEIELMKVARA-----HPKAKLVLRIATDDS-----KAVCRLSVKFGATLK 132 (240)
T ss_dssp ECCSSCCHHHHHHHHH---TTCC-EEEECSHHHHHHHHHH-----CTTCEEEEEBCC----------------CCCBCHH
T ss_pred ECCCCCCHHHHHHHHH---HHCC-CCCCHHHHHHHHHHHH-----CCCCCCCCCCCCCCC-----CCCCCCCCCCCCCHH
T ss_conf 4277520678999988---6333-4221027788999874-----665665422344555-----443676766534389
Q ss_pred HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999986689873478886338876788999999999999999999717994058724556554777777777778
Q T0547 210 ELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRN 289 (611)
Q Consensus 210 ei~~~i~~l~~~~~l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~~~l~~LDIGGGlgV~Y~~~~~~~s~n 289 (611)
++..++++++..+. .+.|||||+|||+.+...|.++++.+..++..+++.|. ++++||+|||||++|+..
T Consensus 133 ~~~~~~~~~~~~~l--~l~GlH~H~GSq~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~ldiGGG~~~~~~~~------- 202 (240)
T d7odca2 133 TSRLLLERAKELNI--DVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGF-SMHLLDIGGGFPGSEDTK------- 202 (240)
T ss_dssp HHHHHHHHHHHTTC--EEEEEECCCCSSCCCTHHHHHHHHHHHHHHHHHHHHTC-CCCEEECCCCCCCSSSSS-------
T ss_pred HHHHHHHHHHHCCC--EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEECCCCCCCCCCC-------
T ss_conf 99999998640694--68761100010343288899999998888899998299-805998488768788899-------
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCC
Q ss_conf 8889999999999999999648998778870756777504
Q T0547 290 YTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANH 329 (611)
Q Consensus 290 y~l~eya~~Iv~~i~~~c~~~~vp~P~Ii~EpGRaivA~~ 329 (611)
.++++|+..+...+++.+... +.|+|++||||||||++
T Consensus 203 ~~~~~~~~~i~~~l~~~~~~~--~~~~l~~EPGR~lvA~A 240 (240)
T d7odca2 203 LKFEEITSVINPALDKYFPSD--SGVRIIAEPGRYYVASA 240 (240)
T ss_dssp SCHHHHHHHHHHHHHHHSCGG--GTCEEEECCSHHHHGGG
T ss_pred CCHHHHHHHHHHHHHHHCCCC--CCCEEEEECCHHHHCCC
T ss_conf 999999999999999862648--99889996867985079
No 5
>d1f3ta2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Trypanosoma brucei [TaxId: 5691]}
Probab=100.00 E-value=6.8e-41 Score=325.50 Aligned_cols=238 Identities=20% Similarity=0.277 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCEEE
Q ss_conf 79999999999999999999708898723787453378789999999846667851662288999999964899881787
Q T0547 52 PHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITV 131 (611)
Q Consensus 52 ~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~~~Ii~ 131 (611)
-|.++.|++++.++|+ +.+++||+|||+++.|++.+.+.| +|+||+|.+||.+|+++|+++++|+|
T Consensus 2 l~~i~~~~~~~~~~~p----------~v~~~YA~KaN~~~~il~~l~~~g----~g~dv~S~~El~~al~~G~~~~~Iif 67 (240)
T d1f3ta2 2 LGDIVRKHETWKKCLP----------RVTPFYAVKCNDDWRVLGTLAALG----TGFDCASNTEIQRVRGIGVPPEKIIY 67 (240)
T ss_dssp HHHHHHHHHHHHHHCT----------TEEEEEEGGGCCCHHHHHHHHHTT----CEEEECSHHHHHHHHHTTCCGGGEEE
T ss_pred HHHHHHHHHHHHHHCC----------CCEEEEEECCCCCHHHHHHHHHCC----CCEEECCCHHHHHHHHCCCCCCCEEE
T ss_conf 7899999999998789----------987988750179999999999869----98684251368999983899642465
Q ss_pred CC-CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 88-98999999998542357104898668899999999999846986226888850788776422046665647889899
Q T0547 132 NG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTE 210 (611)
Q Consensus 132 nG-~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~~~~Tgg~~SKFGl~~~e 210 (611)
+| +|++++|+.|+. .|.+ ++++||++|+++|.+.+ .+.++.+|+++... ..+++..+|||++.++
T Consensus 68 ~g~~k~~~ei~~a~~---~g~~-~~~~ds~~el~~i~~~~-----~~~~~~~ri~~~~~-----~~~~~~~~kFGi~~~~ 133 (240)
T d1f3ta2 68 ANPCKQISHIRYARD---SGVD-VMTFDCVDELEKVAKTH-----PKAKMVLRISTDDS-----LARCRLSVKFGAKVED 133 (240)
T ss_dssp CCSSCCHHHHHHHHH---TTCC-EEEECSHHHHHHHHHHC-----TTCEEEEEBCC---------------CCSCBCHHH
T ss_pred CCCCCHHHHHHHHHH---HCCC-CEEEEEHHHHHHHHHHC-----CCCCCCCCCCCCCC-----CCCCCCCCCCHHHHHH
T ss_conf 065310577999987---1245-32442101255555533-----55564422123222-----2455665520133789
Q ss_pred HHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999866898734788863388767889999999999999999997179940587245565547777777777788
Q T0547 211 LIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNY 290 (611)
Q Consensus 211 i~~~i~~l~~~~~l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~~~l~~LDIGGGlgV~Y~~~~~~~s~ny 290 (611)
+.++++.++..+. ++.|||||+|||+.+...|.++++.+..++..+++.|. .+++||+|||||++|+.. .
T Consensus 134 ~~~~~~~~~~~~~--~l~GlH~H~GS~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~ldiGGG~~~~~~~~---~---- 203 (240)
T d1f3ta2 134 CRFILEQAKKLNI--DVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGTELGF-NMHILDIGGGFPGTRDAP---L---- 203 (240)
T ss_dssp HHHHHHHHHHTTC--EEEEEECCCCSCCSCTHHHHHHHHHHHHHHHHHHHTTC-CCCEEECCCCCCSSTTSS---S----
T ss_pred HHHHHHHHHCCCC--CEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCEEEECCCCCCCCCCCC---C----
T ss_conf 9999998733366--45666542222026889999999988999999998299-743550267657788899---9----
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCC
Q ss_conf 889999999999999999648998778870756777504
Q T0547 291 TLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANH 329 (611)
Q Consensus 291 ~l~eya~~Iv~~i~~~c~~~~vp~P~Ii~EpGRaivA~~ 329 (611)
++++|+..+...+++.+.. + ..++|++|||||+||.+
T Consensus 204 ~~~~~~~~i~~~l~~~~~~-~-~~~~l~~EPGR~lva~A 240 (240)
T d1f3ta2 204 KFEEIAGVINNALEKHFPP-D-LKLTIVAEPGRYYVASA 240 (240)
T ss_dssp CHHHHHHHHHHHHHHHSCC-C-TTCEEEECCSHHHHGGG
T ss_pred CHHHHHHHHHHHHHHHCCC-C-CCCEEEEECCHHHHCCC
T ss_conf 9999999999999986476-8-99789993287985179
No 6
>d1f3ta1 b.49.2.3 (A:14-43,A:284-422) Eukaryotic ornithine decarboxylase (ODC) {Trypanosoma brucei [TaxId: 5691]}
Probab=98.72 E-value=5.9e-09 Score=84.47 Aligned_cols=147 Identities=20% Similarity=0.221 Sum_probs=98.0
Q ss_pred HHHHHHHCCCCCCEEEEECCHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999964899877887075677750411455221022356666545565445178999999997307434688999999
Q T0547 303 LKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSI 382 (611)
Q Consensus 303 i~~~c~~~~vp~P~Ii~EpGRaivA~~~vLv~~Vi~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~da~ 382 (611)
-+.+|.+.++ +++.||||+.|| ..|+++|++.+........... +..
T Consensus 9 ~~~~~~~~~~---~~~~epg~ffvA--fTLvt~VI~kr~~~~~~~~~~~-~~~--------------------------- 55 (169)
T d1f3ta1 9 RDALCKKISM---NTCDEGDPFFVA--FTLAVNVIAKKVTPGVQTDVGA-HAE--------------------------- 55 (169)
T ss_dssp HHHHHHHCC---------CCCEEEE--EEEEEEEEEEEEC----------------------------------------
T ss_pred HHHHHHHCCC---EEEECCCCEEEE--EEEEEEEEEEEECCCCCCCCCC-CCC---------------------------
T ss_conf 7788875596---599759882799--9999999999871475222234-445---------------------------
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
Q ss_conf 99999999973696678999899999999999999851234560467888888755653303244223101000663120
Q T0547 383 DHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPI 462 (611)
Q Consensus 383 ~~~~~~~~~f~~G~l~L~~ra~~E~l~~~i~~~~~~~~~~~~~~~~~~~l~~~l~~~y~~NfS~FqslPD~Wai~Q~Fpi 462 (611)
.....-.||+|=+++.|+-..+-=.+.++.
T Consensus 56 --------------------------------------------------~~~~~~~yyindG~ygsf~~~l~d~~~~~~ 85 (169)
T d1f3ta1 56 --------------------------------------------------SNAQSFMYYVNDGVYGSFNCILYDHAVVRP 85 (169)
T ss_dssp -----------------------------------------------------CCEEEEESCCTTTGGGHHHHSCCCCCC
T ss_pred --------------------------------------------------CCCCCEEEEECCCCCCCHHHHHHCCCCEEE
T ss_conf --------------------------------------------------787416999688787898587615531446
Q ss_pred CCCC-CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf 1354-6788865104873364374663014677765567788878960788860206999747751567898579999
Q T0547 463 MPLD-RLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIIS 539 (611)
Q Consensus 463 ~Pl~-rl~e~P~~~~~l~DiTCDSDG~i~~~~~~~l~lh~~~~~~e~y~lG~FlvGAYQeiLGd~HNLfg~t~~v~v~ 539 (611)
.|.. ...++|....++++-||||-..+... ..|+++.. |+ +|.|..+|||.-.+...+|=|..+..+.|.
T Consensus 86 ~~~~~~~~~~~~~~~~v~GptCds~D~i~~~----~~lPel~v-GD--~L~~~n~GAYt~~~ss~FNGf~~p~v~yv~ 156 (169)
T d1f3ta1 86 LPQREPIPNEKLYPSSVWGPTCDGLDQIVER----YYLPEMQV-GE--WLLFEDMGAYTVVGTSSFNGFQSPTIYYVV 156 (169)
T ss_dssp EECSCCCTTCCEEEEEEECSSSCTTCEEEEE----EEEECCCT-TC--EEEECSCCSSSGGGCCCGGGCCCCEEEEEC
T ss_pred EEECCCCCCCCEEEEEEEECCCCCCCEEEEE----EECCCCCC-CC--EEEEECCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 6302678888637899982267764545024----20551257-98--899937884513226778898898089997
No 7
>d1rcqa2 c.1.6.1 (A:8-233) Alanine racemase {Pseudomonas aeruginosa [TaxId: 287]} SCOP: d1vfsa2 d1bd0a2
Probab=98.68 E-value=5.5e-07 Score=69.60 Aligned_cols=169 Identities=14% Similarity=0.134 Sum_probs=116.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC----CHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCC
Q ss_conf 479999999999999999999708898723787453378----7899999998466678516622889999999648998
Q T0547 51 FPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQ----YPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEG 126 (611)
Q Consensus 51 f~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~----~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~ 126 (611)
+.+.|+++++.+++.- | -+.+..+|+|. ...|.+.+ +.|.. ++-|++-.|-......|.+.
T Consensus 2 dl~al~~Ni~~~r~~~----------~-~~~~aVvKanAYGhG~~~ia~~l-~~g~~---~f~Va~~~EA~~lr~~g~~~ 66 (226)
T d1rcqa2 2 DLQALRHNYRLAREAT----------G-ARALAVIKADAYGHGAVRCAEAL-AAEAD---GFAVACIEEGLELREAGIRQ 66 (226)
T ss_dssp EHHHHHHHHHHHHHHH----------C-SEEEEECHHHHHTTCHHHHHHHH-TTTCS---EEEESSHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHHCC----------C-CCEEEEECCCCCCCCHHHHHHHH-HHHCC---EEEEECHHHHHHHHHHHHHC
T ss_conf 8789999999998626----------9-96899860475566888999999-96362---53344188999998753100
Q ss_pred CCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 81787889899999999854235710489866889999999999984698622688885078877642204666564788
Q T0547 127 APITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGL 206 (611)
Q Consensus 127 ~~Ii~nG~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~~~~Tgg~~SKFGl 206 (611)
..++++|..+.++++.++. +++.++|+|.+.++.+.+.+ .+.++. +-++.++ | -.++|+
T Consensus 67 ~Ilvl~g~~~~~~~~~~~~-----~~i~~~i~s~~~l~~~~~~~---~~~~~~--vhlkiDt---------G--m~R~G~ 125 (226)
T d1rcqa2 67 PILLLEGFFEASELELIVA-----HDFWCVVHCAWQLEAIERAS---LARPLN--VWLKMDS---------G--MHRVGF 125 (226)
T ss_dssp CEEETTCCSSGGGHHHHHH-----TTEEEEECSHHHHHHHHHCC---CSSCEE--EEEEBCS---------S--SCSSSB
T ss_pred CEEEECCCCCHHHHHHHHH-----CCCCEEECCHHHHHHHHHHH---CCCCCC--EEEEECC---------C--CCCCCC
T ss_conf 0035647989889999996-----07723354889999999862---388730--4776236---------6--761441
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9899999999998668987347888633887-67889999999999999999997
Q T0547 207 TSTELIEAVNLLKENKLLEQFTMIHFHLGSQ-ITEIHPLKKALNEAGNIYTELRK 260 (611)
Q Consensus 207 ~~~ei~~~i~~l~~~~~l~~L~gLHfHIGSQ-I~di~~~~~ai~ea~~ly~eL~~ 260 (611)
+.+|+.++++.++..+.+ .+.|+..|..+- ..+.... ++-.+.|.++.+
T Consensus 126 ~~~e~~~~~~~i~~~~~l-~~~Gi~tHfa~ad~~~~~~~----~~Q~~~F~~~~~ 175 (226)
T d1rcqa2 126 FPEDFRAAHERLRASGKV-AKIVMMSHFSRADELDCPRT----EEQLAAFSAASQ 175 (226)
T ss_dssp CHHHHHHHHHHHHHTTCE-EEEEEECCCSSTTCTTCTHH----HHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCC-EEEEEEEECCCCCCHHHHHH----HHHHHHHHHHHH
T ss_conf 288899999988633674-13001122056500221799----999999999997
No 8
>d1hkva1 b.49.2.3 (A:2-45,A:311-447) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.64 E-value=2.2e-09 Score=87.65 Aligned_cols=150 Identities=13% Similarity=0.172 Sum_probs=104.6
Q ss_pred HHHHCCCCCCEEEEECCHHHHHCCCEEEEEEEECCCCCC----CCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 999648998778870756777504114552210223566----6654556544517899999999730743468899999
Q T0547 306 IAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY----AENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDS 381 (611)
Q Consensus 306 ~c~~~~vp~P~Ii~EpGRaivA~~~vLv~~Vi~v~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~da 381 (611)
.| ..|+|.|.|.+||||+|| +++.++.|-.+|.-.. .......+...+.+++-..
T Consensus 23 ~~-~~~~~~~~~~~epgr~~~--~~~~ly~vg~vK~v~~k~~~~r~fv~vDgGm~d~iRPaL------------------ 81 (181)
T d1hkva1 23 VC-IAGIPLTQLAQEYGTPLF--VIITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTAL------------------ 81 (181)
T ss_dssp EE-ETTEEHHHHHHHHCSSEE--EEEEEEECCEEEEEECSSSCEEEEEECSCCTTTCCHHHH------------------
T ss_pred HH-HCCCCCHHHHCCCCCCEE--EEEEEEECCEEEEEECCCCCCCEEEEECCCCCCCCCCCC------------------
T ss_conf 87-518964054237896235--478999710289994168886679996577455644210------------------
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
Q ss_conf 99999999997369667899989999999999999985123456046788888875565330324422310100066312
Q T0547 382 IDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFP 461 (611)
Q Consensus 382 ~~~~~~~~~~f~~G~l~L~~ra~~E~l~~~i~~~~~~~~~~~~~~~~~~~l~~~l~~~y~~NfS~FqslPD~Wai~Q~Fp 461 (611)
| +..++
T Consensus 82 ----------------------------------------------------------Y----------------~A~h~ 87 (181)
T d1hkva1 82 ----------------------------------------------------------Y----------------GAQYD 87 (181)
T ss_dssp ----------------------------------------------------------H----------------CCCCC
T ss_pred ----------------------------------------------------------C----------------CCCCC
T ss_conf ----------------------------------------------------------4----------------76353
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-CCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 013546788865104873364374663014677-7655677888789607888602069997477515678985799998
Q T0547 462 IMPLDRLDEEPTRSASIWDITCDSDGEISYSKD-KPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISI 540 (611)
Q Consensus 462 i~Pl~rl~e~P~~~~~l~DiTCDSDG~i~~~~~-~~l~lh~~~~~~e~y~lG~FlvGAYQeiLGd~HNLfg~t~~v~v~~ 540 (611)
|.++.+.++.+.....+++-+|+|- |.+.. ..||- ++. +|. +|.|+.+|||--.|...+|.|+.+-+|-|.
T Consensus 88 i~~~~~~~~~~~~~~~VvGp~Cesg---Dil~~d~~LP~-~l~-~GD--lLai~~~GAYg~sMsSnyN~~prPaeV~V~- 159 (181)
T d1hkva1 88 VRLVSRVSDAPPVPARLVGKHCESG---DIIVRDTWVPD-DIR-PGD--LVAVAATGAYCYSLSSRYNMVGRPAVVAVH- 159 (181)
T ss_dssp EEECSSCCCSCEEEEEEECSSSSTT---CEEEEEEEEET-TCC-TTC--EEEESCCSSSTGGGCBCGGGCCCCEEEEEE-
T ss_pred CCCCCCCCCCCCEEEEEEECCCCCC---CEEECCCCCCC-CCC-CCC--EEEEECCCCCHHHHCCCCCCCCCCCEEEEE-
T ss_conf 2134464346752455651477655---57411456753-489-969--999843411124535332389998189998-
Q ss_pred CCCCEEEEEECCCCCHHHHHH
Q ss_conf 899628875137887899998
Q T0547 541 NEKGYEVEGIIEAQSILDTLE 561 (611)
Q Consensus 541 ~~~g~~i~~~~~gdt~~~vL~ 561 (611)
+ | ...-+.+.+|.+|+++
T Consensus 160 -d-g-~~~lIrrREt~eDll~ 177 (181)
T d1hkva1 160 -A-G-NARLVLRRETVDDLLS 177 (181)
T ss_dssp -T-T-EEEEEECCCCHHHHHT
T ss_pred -C-C-EEEEEECCCCHHHHHH
T ss_conf -9-9-4999985799999998
No 9
>d1vfsa2 c.1.6.1 (A:13-249) Alanine racemase {Streptomyces lavendulae [TaxId: 1914]}
Probab=98.48 E-value=2.3e-05 Score=57.41 Aligned_cols=178 Identities=13% Similarity=0.118 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC----CHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCC
Q ss_conf 79999999999999999999708898723787453378----78999999984666785166228899999996489988
Q T0547 52 PHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQ----YPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGA 127 (611)
Q Consensus 52 ~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~----~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~~ 127 (611)
-+-|+++++.+++.- ++-+.+..||+|- ...|.+.+.+.|.. +|-|++-.|-...+.+|....
T Consensus 2 L~al~~N~~~l~~~~----------~~~~i~aVVKAnAYGhG~~~ia~~l~~~g~~---~f~Va~~~EA~~lR~~g~~~~ 68 (237)
T d1vfsa2 2 LDAVRANVRALRARA----------PRSALMAVVKSNAYGHGAVPCARAAQEAGAA---WLGTATPEEALELRAAGIQGR 68 (237)
T ss_dssp HHHHHHHHHHHHTTS----------TTSEEEEECHHHHHTTCHHHHHHHHHHHTCC---EEEESSHHHHHHHHHTTCCSE
T ss_pred HHHHHHHHHHHHHHC----------CCCEEEEEEEECCCCCCHHHHHHHHHHCCCC---EEEEEECCHHHHHHHHCCCCC
T ss_conf 799999999999768----------9982999981315747799999999986999---898740034889987046897
Q ss_pred CEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 17878898999999998542357104898668899999999999846986226888850788776422046665647889
Q T0547 128 PITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLT 207 (611)
Q Consensus 128 ~Ii~nG~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~~~~Tgg~~SKFGl~ 207 (611)
.+++++.-. +.++.++. +++.++|.+.+.++.+.+.++.. +....+-|.| ++ |- +++|+.
T Consensus 69 Il~l~~~~~-~~~~~~~~-----~~i~~~i~s~~~l~~l~~~a~~~-~~~~~vhLki--DT---------GM--~RlG~~ 128 (237)
T d1vfsa2 69 IMCWLWTPG-GPWREAIE-----TDIDVSVSGMWALDEVRAAARAA-GRTARIQLKA--DT---------GL--GRNGCQ 128 (237)
T ss_dssp EEECCCCTT-CCHHHHHH-----TTCEEEECSHHHHHHHHHHHHHH-TSCEEEEEEB--CS---------SC--CSSSBC
T ss_pred EEECCCCCH-HHHHHHHH-----HCCCCEECCHHHHHHHHHHHHHC-CCCEEEEEEE--CC---------CC--CCCCCC
T ss_conf 200258872-78999997-----23452434198899999999965-9972699985--58---------87--777888
Q ss_pred HHHHHHHHHH---HHHCCCCCCEEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 8999999999---98668987347888633887-67889999999999999999997179
Q T0547 208 STELIEAVNL---LKENKLLEQFTMIHFHLGSQ-ITEIHPLKKALNEAGNIYTELRKMGA 263 (611)
Q Consensus 208 ~~ei~~~i~~---l~~~~~l~~L~gLHfHIGSQ-I~di~~~~~ai~ea~~ly~eL~~~g~ 263 (611)
.+|+.++++. ++..+.+ .+.|+-.|..+- ..+.......++....+...+++.|.
T Consensus 129 ~~e~~~l~~~~~~~~~~~~l-~~~Gi~TH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~~~ 187 (237)
T d1vfsa2 129 PADWAELVGAAVAAQAEGTV-QVTGVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEGV 187 (237)
T ss_dssp HHHHHHHHHHHHHHHHTTSE-EEEEEECCCSSTTSTTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHCCCCE-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 35789999998865306863-265565120245311226689999999999999997189
No 10
>d7odca1 b.49.2.3 (A:2-43,A:284-418) Eukaryotic ornithine decarboxylase (ODC) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.39 E-value=8.4e-08 Score=75.75 Aligned_cols=94 Identities=23% Similarity=0.268 Sum_probs=67.6
Q ss_pred HHHHHHHHHHCCHHHHCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 65330324422310100066312013-54678886510487336437466301467776556778887896078886020
Q T0547 439 RYLVNFSLFQSMPDFWGLEQNFPIMP-LDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVG 517 (611)
Q Consensus 439 ~y~~NfS~FqslPD~Wai~Q~Fpi~P-l~rl~e~P~~~~~l~DiTCDSDG~i~~~~~~~l~lh~~~~~~e~y~lG~FlvG 517 (611)
.|++|=+++.|+-+.|-=.+.++.++ ..+-.+.+..+.+|++-||||-..|.. ..+|+.+.. | + +|.|..+|
T Consensus 74 ~yyindGvygsf~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~GptCds~D~i~~----~~~lP~l~v-G-D-~L~f~~~G 146 (177)
T d7odca1 74 MYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVE----RCNLPEMHV-G-D-WMLFENMG 146 (177)
T ss_dssp EEEESCCTTTTTHHHHHSCCCCCCEESSCCCTTCCEEEEEEECSSSCTTCEEEE----EEEEECCCT-T-C-EEEECSCC
T ss_pred EEEECCCCCCCHHHHHCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEE----CCCCCCCCC-C-C-EEEEECCC
T ss_conf 999789876876575435454200103578876661789998741788879845----543885452-6-7-89994788
Q ss_pred HHHHHHCCCCCCCCCCCEEEEE
Q ss_conf 6999747751567898579999
Q T0547 518 AYQEVLGMKHNLFTHPTEAIIS 539 (611)
Q Consensus 518 AYQeiLGd~HNLfg~t~~v~v~ 539 (611)
||.-.++..+|-|..+..+.|.
T Consensus 147 AYt~~~ss~FNGf~~p~v~~v~ 168 (177)
T d7odca1 147 AYTVAAASTFNGFQRPNIYYVM 168 (177)
T ss_dssp SSSGGGCCCGGGCCCCEEEEEE
T ss_pred CCHHHCCCCCCCCCCCEEEEEE
T ss_conf 5521105688898899799997
No 11
>d1knwa1 b.49.2.3 (A:2-31,A:279-422) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]}
Probab=98.37 E-value=8.5e-07 Score=68.18 Aligned_cols=88 Identities=20% Similarity=0.251 Sum_probs=63.8
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCC---CCCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEEECCCC
Q ss_conf 788865104873364374663014677765---56778887896078886020699974775156789857999988996
Q T0547 468 LDEEPTRSASIWDITCDSDGEISYSKDKPL---FLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKG 544 (611)
Q Consensus 468 l~e~P~~~~~l~DiTCDSDG~i~~~~~~~l---~lh~~~~~~e~y~lG~FlvGAYQeiLGd~HNLfg~t~~v~v~~~~~g 544 (611)
....|.....+++-||+|-..+...+.-.. .+.++.. | =+|.|+.+|||.-.+...+|-++.+.+|.+. + |
T Consensus 79 ~~~~~~~~~~I~Gp~C~~~D~l~~~~~l~~~~~~~p~l~~-G--D~l~i~~~GAY~~s~ss~Fn~~~~Pa~V~~~--~-g 152 (174)
T d1knwa1 79 LEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKA-G--DYLVLHDTGAYGASMSSNYNSRPLLPEVLFD--N-G 152 (174)
T ss_dssp CTTCCEEEEEEECSSSSTTCBSSBCTTSCBCCEEEECCCT-T--CEEEEESCSSSSGGGCCCTTTCCCCCEEEEE--T-T
T ss_pred CCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCC-C--CEEEEECCCCCHHHHCCCCCCCCCCCEEEEE--C-C
T ss_conf 2357736899980577887688204565521134777899-9--9999931513021436645599988199999--9-9
Q ss_pred EEEEEECCCCCHHHHHHH
Q ss_conf 288751378878999987
Q T0547 545 YEVEGIIEAQSILDTLED 562 (611)
Q Consensus 545 ~~i~~~~~gdt~~~vL~~ 562 (611)
.++-+.+.+|.+|+++.
T Consensus 153 -~~~lIr~ret~edl~~~ 169 (174)
T d1knwa1 153 -QARLIRRRQTIEELLAL 169 (174)
T ss_dssp -EEEEEECCCCHHHHHTT
T ss_pred -EEEEEECCCCHHHHHHC
T ss_conf -89999868999999853
No 12
>d1twia1 b.49.2.3 (A:15-49,A:314-448) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.91 E-value=2.6e-06 Score=64.49 Aligned_cols=91 Identities=24% Similarity=0.253 Sum_probs=63.3
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEE
Q ss_conf 31201354678886510487336437466301467776556778887896078886020699974775156789857999
Q T0547 459 NFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAII 538 (611)
Q Consensus 459 ~Fpi~Pl~rl~e~P~~~~~l~DiTCDSDG~i~~~~~~~l~lh~~~~~~e~y~lG~FlvGAYQeiLGd~HNLfg~t~~v~v 538 (611)
.+++.+.. ...+.....+++-||+|-..+.. ..+++++.. | -+|.|..+|||--.+...+|-+..+-+|.+
T Consensus 72 ~~~~~~~~--~~~~~~~~~v~Gp~C~s~D~l~~----~~~lp~l~~-G--D~l~i~~~GAY~~smss~fN~~~~PaeVl~ 142 (170)
T d1twia1 72 YHHIINCK--VKNEKEVVSIAGGLCESSDVFGR----DRELDKVEV-G--DVLAIFDVGAYGISMANNYNARGRPRMVLT 142 (170)
T ss_dssp CCCEEESB--CCSCEEEEEEECSSSCTTCEEEE----EEEEECCCT-T--CEEEEECCSSSSGGGCBCTTTCCCCEEEEE
T ss_pred HCCCCCCC--CCCCCEEEEEECCCCCCCEEEEE----EEECCCCCC-C--CEEEEECCHHHHHHCCCCCCCCCCCEEEEE
T ss_conf 00321124--55550689970762464107898----620565689-8--999992705754350511028999829999
Q ss_pred EECCCCEEEEEECCCCCHHHHHHH
Q ss_conf 988996288751378878999987
Q T0547 539 SINEKGYEVEGIIEAQSILDTLED 562 (611)
Q Consensus 539 ~~~~~g~~i~~~~~gdt~~~vL~~ 562 (611)
. ++++++ +.+.+|.+|+++.
T Consensus 143 ~--~g~~~l--Ir~ret~eDl~~~ 162 (170)
T d1twia1 143 S--KKGVFL--IRERETYADLIAK 162 (170)
T ss_dssp E--TTEEEE--EECCCCHHHHTTT
T ss_pred E--CCEEEE--EECCCCHHHHHHC
T ss_conf 8--998999--9858999999855
No 13
>d1rcqa2 c.1.6.1 (A:8-233) Alanine racemase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=97.63 E-value=0.0039 Score=40.56 Aligned_cols=149 Identities=15% Similarity=0.158 Sum_probs=101.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC----CHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCC
Q ss_conf 479999999999999999999708898723787453378----7899999998466678516622889999999648998
Q T0547 51 FPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQ----YPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEG 126 (611)
Q Consensus 51 f~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~----~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~ 126 (611)
+.+-|+++++.+++.- |. +.+--+|+|- ...|.+.+ +.|.. +|=|++..|=...+..|...
T Consensus 2 dl~al~~N~~~ir~~~----------~~-~i~aVVKanAYGhG~~~va~~l-~~g~~---~faVa~~~Ea~~LR~~g~~~ 66 (226)
T d1rcqa2 2 DLQALRHNYRLAREAT----------GA-RALAVIKADAYGHGAVRCAEAL-AAEAD---GFAVACIEEGLELREAGIRQ 66 (226)
T ss_dssp EHHHHHHHHHHHHHHH----------CS-EEEEECHHHHHTTCHHHHHHHH-TTTCS---EEEESSHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHHCC----------CC-CEEEEEEECCCCCCHHHHHHHH-HHCCC---HHHHHHHCCHHHHHHCCCCC
T ss_conf 7899999999997454----------99-5999981335617599999999-96666---11355410089999729998
Q ss_pred CCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 81787889899999999854235710489866889999999999984698622688885078877642204666564788
Q T0547 127 APITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGL 206 (611)
Q Consensus 127 ~~Ii~nG~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~~~~Tgg~~SKFGl 206 (611)
..++++|.-+.++.+.+. .+++.+++.+...++.+...+ .+...+ +=++.+| |- +++|+
T Consensus 67 ~Ilvl~~~~~~~~~~~~~-----~~~i~~~i~~~~~~~~~~~~~---~~~~~~--vhlkiDT---------GM--~RlG~ 125 (226)
T d1rcqa2 67 PILLLEGFFEASELELIV-----AHDFWCVVHCAWQLEAIERAS---LARPLN--VWLKMDS---------GM--HRVGF 125 (226)
T ss_dssp CEEETTCCSSGGGHHHHH-----HTTEEEEECSHHHHHHHHHCC---CSSCEE--EEEEBCS---------SS--CSSSB
T ss_pred CEEEECCCCCHHHHHHHH-----HCCCCCEECCHHHHHHHHHHH---HCCCEE--EEEEEEC---------CC--CCCCC
T ss_conf 558711468778999998-----516661544299999999974---125226--8999834---------64--32466
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf 989999999999866898734788863388
Q T0547 207 TSTELIEAVNLLKENKLLEQFTMIHFHLGS 236 (611)
Q Consensus 207 ~~~ei~~~i~~l~~~~~l~~L~gLHfHIGS 236 (611)
+.+|+.++++.++..+.+ .+.|+--|..+
T Consensus 126 ~~~e~~~~~~~~~~~~~l-~~~gi~tHfa~ 154 (226)
T d1rcqa2 126 FPEDFRAAHERLRASGKV-AKIVMMSHFSR 154 (226)
T ss_dssp CHHHHHHHHHHHHHTTCE-EEEEEECCCSS
T ss_pred CHHHHHHHHHHHHCCCCC-CCEECCCCCCC
T ss_conf 858888888876413443-30000354356
No 14
>d1bd0a2 c.1.6.1 (A:12-244) Alanine racemase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.62 E-value=0.0039 Score=40.52 Aligned_cols=165 Identities=13% Similarity=0.108 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC----CHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCC
Q ss_conf 479999999999999999999708898723787453378----7899999998466678516622889999999648998
Q T0547 51 FPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQ----YPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEG 126 (611)
Q Consensus 51 f~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~----~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~ 126 (611)
+.+-|+++++.+++.- +++-+.+--||+|- ...|.+.+.+.|.+ +|=|++-.|-.....++...
T Consensus 2 dl~al~~N~~~ir~~~---------~~~~~i~aVVKAnAYGhG~~~ia~~l~~~G~~---~f~Va~i~EA~~LR~~g~~~ 69 (233)
T d1bd0a2 2 DLDAIYDNVENLRRLL---------PDDTHIMAVVKANAYGHGDVQVARTALEAGAS---RLAVAFLDEALALREKGIEA 69 (233)
T ss_dssp EHHHHHHHHHHHHHHS---------CTTCEEEEECHHHHHTTCHHHHHHHHHHHTCC---EEEESSHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHHHC---------CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCC---CCHHHHHCCHHHHHHHCCCC
T ss_conf 7899999999999848---------99896999972234758779999999965767---43165302089999827764
Q ss_pred CCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 81787889899999999854235710489866889999999999984698622688885078877642204666564788
Q T0547 127 APITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGL 206 (611)
Q Consensus 127 ~~Ii~nG~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~~~~Tgg~~SKFGl 206 (611)
..++++|.-.. +++.+. .+++.+++.+.+.++.+...+ +.+.+.++-|.| + || -.++|+
T Consensus 70 ~Ilvl~~~~~~-~~~~~~-----~~~i~~~v~~~~~~~~~~~~~--~~~~~~~vhLkv--D---------TG--M~RlG~ 128 (233)
T d1bd0a2 70 PILVLGASRPA-DAALAA-----QQRIALTVFRSDWLEEASALY--SGPFPIHFHLKM--D---------TG--MGRLGV 128 (233)
T ss_dssp CEEECSCCCGG-GHHHHH-----HTTEEEEECCHHHHHHHHHHC--CCSSCEEEEEEB--C---------SS--SCSSSB
T ss_pred EEEECCCCCCH-HHHHHH-----HCCCCCEEEHHHHHHHHHHHH--CCCCCEEEEEEE--C---------CC--CCCCCC
T ss_conf 47312687607-788765-----414642343699865566520--357524789986--2---------56--666789
Q ss_pred CHHH-HHHHHHHHHHCCCCCCEEEEEEECCCC-CCCHHHHHHHHH
Q ss_conf 9899-999999998668987347888633887-678899999999
Q T0547 207 TSTE-LIEAVNLLKENKLLEQFTMIHFHLGSQ-ITEIHPLKKALN 249 (611)
Q Consensus 207 ~~~e-i~~~i~~l~~~~~l~~L~gLHfHIGSQ-I~di~~~~~ai~ 249 (611)
..++ .....+.++..+.+ .+.|+.-|..+- ..+.......++
T Consensus 129 ~~~e~~~~~~~~~~~~~~l-~i~Gi~THla~ad~~~~~~~~~q~~ 172 (233)
T d1bd0a2 129 KDEEETKRIVALIERHPHF-VLEGLYTHFATADEVNTDYFSYQYT 172 (233)
T ss_dssp CSHHHHHHHHHHHHHSTTE-EEEEEECCCSSTTSSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCC-CHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 8489899999998506664-2466531204777522047899999
No 15
>d1ct5a_ c.1.6.2 (A:) "Hypothetical" protein ybl036c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.76 E-value=4.4 Score=17.47 Aligned_cols=196 Identities=12% Similarity=0.069 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHHHHC--C-CCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCEEE
Q ss_conf 9999999999999999970--8-898723787453378789999999846667851662288999999964899881787
Q T0547 55 IQKQIENIYGNFNKARKEF--G-YKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITV 131 (611)
Q Consensus 55 l~~ri~~l~~aF~~A~~~~--~-Y~g~y~~vYaiKaN~~~~Vv~~i~~~G~~~~~GlEv~Sk~EL~~ala~g~~~~~Ii~ 131 (611)
|..|++++++.-..|.+.. + -+.+.+.+=..| ++....++.+.++|... ||=- =..|+..-...-.+.-.-.|
T Consensus 13 i~~~~~~i~~~I~~~~~~~~~~r~~~~V~LiaVsK-~~~~~~I~~~~~~G~~~-fGEN--rvQE~~~K~~~l~~~i~wHf 88 (244)
T d1ct5a_ 13 LIAQYESVREVVNAEAKNVHVNENASKILLLVVSK-LKPASDIQILYDHGVRE-FGEN--YVQELIEKAKLLPDDIKWHF 88 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTC-------CCEEEEECT-TSCHHHHHHHHHHTCCE-EEEC--CHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC-CCCHHHHHHHHHCCCCH-HHCC--HHHHHHHHCCCCCCCEEEEE
T ss_conf 99999999999999988765389978669999989-99999999999849861-2004--04556542012322012122
Q ss_pred CCC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC--CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 889-899999999854235710489866889999999999984698--62268888507887764220466656478898
Q T0547 132 NGF-KDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP--KPNIGLRVRLHSAGVGIWAKSGGINSKFGLTS 208 (611)
Q Consensus 132 nG~-Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v--~p~IgiRv~l~~~~~g~~~~Tgg~~SKFGl~~ 208 (611)
=|- -+.. ++.++. ....-.+=.||++.-+++|.+.+...... ...+.|-|| ++++.+|.|+++
T Consensus 89 IG~LQsNK-vk~i~~--~~~~~~I~svds~kla~~l~~~~~~~~~~~~~~~~~iQVN-----------i~~e~~KsG~~~ 154 (244)
T d1ct5a_ 89 IGGLQTNK-CKDLAK--VPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQIN-----------TSHEDQKSGLNN 154 (244)
T ss_dssp CSCCCGGG-HHHHHH--CTTEEEEEEECSHHHHHHHHHHHHHHCTTSCCEEEEEEBC-----------CSSSCCSSSBCC
T ss_pred ECCCCCCH-HHHHHH--HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE-----------CCCCCCCCCCCC
T ss_conf 24555123-999997--3364333310001204677788765311357622677651-----------366666678795
Q ss_pred H-HHHHHHHHHH--HCCCCCCEEEEEEECCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 9-9999999998--66898734788863388767--88999999999999999999717994058724
Q T0547 209 T-ELIEAVNLLK--ENKLLEQFTMIHFHLGSQIT--EIHPLKKALNEAGNIYTELRKMGAKNLKAINL 271 (611)
Q Consensus 209 ~-ei~~~i~~l~--~~~~l~~L~gLHfHIGSQI~--di~~~~~ai~ea~~ly~eL~~~g~~~l~~LDI 271 (611)
+ ++.++.+.+. +.+.+ .+.|| +-||.... +-........++..++.++...... ...|-+
T Consensus 155 ~~~l~~~~~~~~~~~~~~l-~l~GL-M~i~p~~~~~~~~~~~~~F~~l~~l~~~l~~~~~~-~~~LSM 219 (244)
T d1ct5a_ 155 EAEIFEVIDFFLSEECKYI-KLNGL-MTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGT-SLKLSM 219 (244)
T ss_dssp HHHHHHHHHHHHSTTCCSE-EEEEE-ECCCCCC---------HHHHHHHHHHHHHHHHHCC-CCEEEC
T ss_pred HHHHHHHHHHHHHHHCCCC-HHCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-CCEEEC
T ss_conf 7899999999999755621-02054-33346788803457889999999999998353799-797717
No 16
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]}
Probab=49.32 E-value=6.7 Score=16.12 Aligned_cols=94 Identities=21% Similarity=0.169 Sum_probs=47.6
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC----EEEEECCCCCCCCCCCCCC--CCCCCCCHHHHHHHHH
Q ss_conf 478886338876788999999999999999999717994----0587245565547777777--7777888899999999
Q T0547 227 FTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKN----LKAINLGGGLAVEYSQFKN--EKSRNYTLREYANDVV 300 (611)
Q Consensus 227 L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~~~----l~~LDIGGGlgV~Y~~~~~--~~s~ny~l~eya~~Iv 300 (611)
+.|--.|.||.- ..-++|+..++++..++.++..+. +..-.+-||-..+=..+.- ..++.+.-.+..+.+.
T Consensus 10 i~G~~~Hag~~P---~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~g~i~gG~~~NviP~~a~~~~d~R~~~~~~~~~~~ 86 (113)
T d1cg2a2 10 ITGKASHAGAAP---ELGVNALVEASDLVLRTMNIDDKAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAM 86 (113)
T ss_dssp EECBCEETTSCG---GGSBCHHHHHHHHHHHHGGGCBTTTTEEEEEEEEEECSSTTEECSEEEEEEEEEESSHHHHHHHH
T ss_pred EEECCCHHCCCC---CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHH
T ss_conf 983064000473---22579789999999998741022542146788886224446016858999998518977899999
Q ss_pred HHHHHHHHHCCCCCCE--EEEECCH
Q ss_conf 9999999964899877--8870756
Q T0547 301 FILKNIAEQKKDLEPD--IFIESGR 323 (611)
Q Consensus 301 ~~i~~~c~~~~vp~P~--Ii~EpGR 323 (611)
..++++|++..++..+ +..|.||
T Consensus 87 ~~i~~~~~~~~~~~~~~ev~~~~~~ 111 (113)
T d1cg2a2 87 KTLEERAQQKKLPEADVKVIVTRGR 111 (113)
T ss_dssp HHHHHHHTSCSSTTCEEEEEEEECS
T ss_pred HHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf 9999999973389977999985358
No 17
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]}
Probab=47.84 E-value=7.5 Score=15.76 Aligned_cols=60 Identities=13% Similarity=0.263 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHCCC-CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC---CCEEEEECCCCC
Q ss_conf 8999999999986689-8734788863388767889999999999999999997179---940587245565
Q T0547 208 STELIEAVNLLKENKL-LEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGA---KNLKAINLGGGL 275 (611)
Q Consensus 208 ~~ei~~~i~~l~~~~~-l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~---~~l~~LDIGGGl 275 (611)
...+.+.++.+++.+. ++ -.|+++|++.+-+++..+++++++ +.+.|. ..+..|||+..-
T Consensus 190 ~~~~~~lv~~L~~~g~pID-gIG~Q~H~~~~~p~~~~~~~~l~~-------~~~~g~~l~v~ITElDV~~~~ 253 (346)
T d1w32a_ 190 TTALVNLVQRLLNNGVPID-GVGFQMHVMNDYPSIANIRQAMQK-------IVALSPTLKIKITELDVRLNN 253 (346)
T ss_dssp HHHHHHHHHHHHHTTCCCC-EEEECCEEESSSSCHHHHHHHHHH-------HHTTCSSCEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHCCCCCC-EEEEEEECCCCCCCHHHHHHHHHH-------HHHHCCCCEEEEEEEEEECCC
T ss_conf 8999999999972678644-278874215789998999999999-------998589961799887760577
No 18
>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=43.19 E-value=3.4 Score=18.38 Aligned_cols=16 Identities=44% Similarity=0.526 Sum_probs=11.1
Q ss_pred CCCCCCCCCCCCCCCC
Q ss_conf 3643746630146777
Q T0547 480 DITCDSDGEISYSKDK 495 (611)
Q Consensus 480 DiTCDSDG~i~~~~~~ 495 (611)
..||||||.--.|..+
T Consensus 2 nf~cdsd~cdl~fttk 17 (31)
T d1tf3a3 2 NFTCDSDGCDLRFTTK 17 (31)
T ss_dssp CEECSSSSCCCEESSH
T ss_pred CCCCCCCCCCEEEEEH
T ss_conf 7414588852388626
No 19
>d1ylea1 d.108.1.8 (A:1-338) Arginine N-succinyltransferase, alpha chain, AstA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=41.43 E-value=9.3 Score=15.07 Aligned_cols=63 Identities=11% Similarity=0.116 Sum_probs=48.4
Q ss_pred EEECCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf 687278888889999999855799858987479999999999999999999708898723787453
Q T0547 21 VCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLK 86 (611)
Q Consensus 21 l~v~p~~~~~l~dlv~~l~~~~~~tPllvrf~dil~~ri~~l~~aF~~A~~~~~Y~g~y~~vYaiK 86 (611)
+.|+|...-||.+|.+-.++.|.|+--|-.+.+.|++||.+-.++|++.. ..++.-.++|-..
T Consensus 2 lviRpv~~~Dl~~L~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~Sf~~~~---~~~~~~~YlFVLE 64 (338)
T d1ylea1 2 LVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEV---SYNGEESYFFVLE 64 (338)
T ss_dssp EEEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTT---CCCSCCEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC---CCCCCCCEEEEEE
T ss_conf 58972753109999999997399965599999999999999999870657---8888753799999
No 20
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}
Probab=40.28 E-value=9.6 Score=14.94 Aligned_cols=56 Identities=11% Similarity=0.028 Sum_probs=27.5
Q ss_pred CCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 99881787889899999999854235710489866-8899999999999846986226888
Q T0547 124 NEGAPITVNGFKDRELINIGFIAAEMGHNITLTIE-GLNELEAIIDIAKERFKPKPNIGLR 183 (611)
Q Consensus 124 ~~~~~Ii~nG~Kd~e~I~lAl~a~~lG~~v~IViD-s~~EL~~I~~ia~~~l~v~p~IgiR 183 (611)
.++.+|.==||-+-..... ++.+.|.+|+ -|| |..-++...+.++. .++..++-+.
T Consensus 66 ~~~~~vLDiGcG~G~~~~~--la~~~~~~v~-gvD~s~~~i~~a~~~~~~-~gl~~~v~~~ 122 (282)
T d2o57a1 66 QRQAKGLDLGAGYGGAARF--LVRKFGVSID-CLNIAPVQNKRNEEYNNQ-AGLADNITVK 122 (282)
T ss_dssp CTTCEEEEETCTTSHHHHH--HHHHHCCEEE-EEESCHHHHHHHHHHHHH-HTCTTTEEEE
T ss_pred CCCCEEEEECCCCCHHHHH--HHCCCCCEEE-EEECCCHHHHHHHCCCCC-CCCCCCCCCC
T ss_conf 9999898709997077765--3205795799-995340244332102333-3333322223
No 21
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=39.14 E-value=5.9 Score=16.52 Aligned_cols=10 Identities=10% Similarity=0.611 Sum_probs=3.6
Q ss_pred HHHHHHHHCC
Q ss_conf 9999997369
Q T0547 386 ESILTLFDLG 395 (611)
Q Consensus 386 ~~~~~~f~~G 395 (611)
+.|.+.|+.|
T Consensus 181 ~~c~~~Y~~g 190 (229)
T d1dlca3 181 DHCVKWYNVG 190 (229)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999978
No 22
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=38.31 E-value=10 Score=14.73 Aligned_cols=92 Identities=11% Similarity=0.064 Sum_probs=53.7
Q ss_pred HHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC-CCCCCCCCCCCCCCC
Q ss_conf 9999999986689873478886338876788999999999999999999717994058724556-554777777777778
Q T0547 211 LIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGG-LAVEYSQFKNEKSRN 289 (611)
Q Consensus 211 i~~~i~~l~~~~~l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~~~l~~LDIGGG-lgV~Y~~~~~~~s~n 289 (611)
+.++.+.+.+.++ .+..+|...+-...+......+++.+.+...-.+++|++ ++-+..| .+-+
T Consensus 48 ~~~l~~~l~~~gl--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~---~i~~~~~~~~~~----------- 111 (278)
T d1i60a_ 48 LDDLAEYFQTHHI--KPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVK---YVVAVPLVTEQK----------- 111 (278)
T ss_dssp HHHHHHHHHTSSC--EEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCC---EEEEECCBCSSC-----------
T ss_pred HHHHHHHHHHCCC--CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCC-----------
T ss_conf 9999999998699--189975677778899899999999999999999974998---455666668888-----------
Q ss_pred CCHHHHHHHHHHHHHHHH---HHCCCCCCEEEEEC
Q ss_conf 888999999999999999---96489987788707
Q T0547 290 YTLREYANDVVFILKNIA---EQKKDLEPDIFIES 321 (611)
Q Consensus 290 y~l~eya~~Iv~~i~~~c---~~~~vp~P~Ii~Ep 321 (611)
++.++.-+.++..++++| ++.|+ .|.+||
T Consensus 112 ~~~~~~~~~~~~~l~~l~~~a~~~Gv---~l~lE~ 143 (278)
T d1i60a_ 112 IVKEEIKKSSVDVLTELSDIAEPYGV---KIALEF 143 (278)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGGTC---EEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCC---EEEEEE
T ss_conf 77799999999999999999997398---246431
No 23
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.30 E-value=12 Score=14.17 Aligned_cols=55 Identities=7% Similarity=-0.015 Sum_probs=25.7
Q ss_pred CCCCCEEECCCCCHHHHHHHH-HHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 998817878898999999998-54235710489866889999999999984698622688
Q T0547 124 NEGAPITVNGFKDRELINIGF-IAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGL 182 (611)
Q Consensus 124 ~~~~~Ii~nG~Kd~e~I~lAl-~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~Igi 182 (611)
.|+.++.==||---. +|+ .+.+-|.+|+-+-=|...++...+.+++ .+...++-+
T Consensus 61 ~~G~~VLDiGCG~G~---~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~-~g~~~~v~~ 116 (285)
T d1kpga_ 61 QPGMTLLDVGCGWGA---TMMRAVEKYDVNVVGLTLSKNQANHVQQLVAN-SENLRSKRV 116 (285)
T ss_dssp CTTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT-CCCCSCEEE
T ss_pred CCCCEEEEECCCCHH---HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf 999889993574018---88988752896148871437789999999876-411112688
No 24
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]}
Probab=33.05 E-value=12 Score=14.14 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHCCC-CCCEEEEEEECCCCCCCHHH
Q ss_conf 99999999986689-87347888633887678899
Q T0547 210 ELIEAVNLLKENKL-LEQFTMIHFHLGSQITEIHP 243 (611)
Q Consensus 210 ei~~~i~~l~~~~~-l~~L~gLHfHIGSQI~di~~ 243 (611)
.+...++.+++.+. ++ -.|+++|+++...++..
T Consensus 205 ~~~~~v~~l~~~g~pid-gIG~Q~H~~~~~~~~~~ 238 (371)
T d1r85a_ 205 ALYNLVKQLKEEGVPID-GIGHQSHIQIGWPSEAE 238 (371)
T ss_dssp HHHHHHHHHHHTTCCCC-EEEECCEECSSSSCHHH
T ss_pred HHHHHHHHHHHCCCCCC-EEECCCCCCCCCCCHHH
T ss_conf 99999999997799744-14334123679988899
No 25
>d1vlba4 d.133.1.1 (A:311-907) Aldehyde oxidoreductase {Desulfovibrio gigas [TaxId: 879]}
Probab=32.82 E-value=11 Score=14.63 Aligned_cols=68 Identities=15% Similarity=0.150 Sum_probs=38.2
Q ss_pred HHHHCCCCCCCEEEC-----C-C--CCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEEC
Q ss_conf 999648998817878-----8-9--899--99999985423571048986688999999999998469862268888507
Q T0547 118 LAMAYNNEGAPITVN-----G-F--KDR--ELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLH 187 (611)
Q Consensus 118 ~ala~g~~~~~Ii~n-----G-~--Kd~--e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiRv~l~ 187 (611)
+|..++.|.++|... | | |.. .+.-.|+.++++|+-|.++.+-.+++. ....++..-+|++.+
T Consensus 89 iA~~Lgl~~~~VrVi~~~vGGgFG~K~~~~~~~~aa~aA~~~grPVk~~~sR~e~~~--------~~~~r~~~~~~~~~g 160 (597)
T d1vlba4 89 IAPGVGLEPDQLVLVANPMGGTFGYKFSPTSEALVAVAAMATGRPVHLRYNYQQQQQ--------YTGKRSPWEMNVKFA 160 (597)
T ss_dssp HHHHHTCCGGGEEEEECCCSCCTTGGGSCSSHHHHHHHHHHHSSCEEEECCHHHHHH--------SSCBCCCEEEEEEEE
T ss_pred HHHHHCCCHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHCC--------CCCCCCCEEEEEEEE
T ss_conf 999969987998999488875698878635999999999976998412113233203--------456665479875665
Q ss_pred CCCCCC
Q ss_conf 887764
Q T0547 188 SAGVGI 193 (611)
Q Consensus 188 ~~~~g~ 193 (611)
.+..|+
T Consensus 161 ~~~dG~ 166 (597)
T d1vlba4 161 AKKDGT 166 (597)
T ss_dssp ECTTCC
T ss_pred ECCCCC
T ss_conf 223245
No 26
>d1iu8a_ c.56.4.1 (A:) Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=30.64 E-value=3.5 Score=18.24 Aligned_cols=10 Identities=30% Similarity=0.291 Sum_probs=3.2
Q ss_pred CCCHHHHHHH
Q ss_conf 7878999999
Q T0547 88 NQYPGFVKNL 97 (611)
Q Consensus 88 N~~~~Vv~~i 97 (611)
||.-.+++.|
T Consensus 17 NpS~~i~~~L 26 (206)
T d1iu8a_ 17 NPTMDIVEAL 26 (206)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
T ss_conf 8599999985
No 27
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]}
Probab=29.57 E-value=14 Score=13.73 Aligned_cols=36 Identities=8% Similarity=0.148 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHH
Q ss_conf 999999999866898734788863388767889999
Q T0547 210 ELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLK 245 (611)
Q Consensus 210 ei~~~i~~l~~~~~l~~L~gLHfHIGSQI~di~~~~ 245 (611)
.....++.+++.+.--...|+|.|.+.+-.+...++
T Consensus 188 ~~~~~v~~l~~~g~~idgiG~q~h~~~~~~~~~~i~ 223 (330)
T d1n82a_ 188 KIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIR 223 (330)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHH
T ss_pred HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHH
T ss_conf 689999999968997541787534766767889999
No 28
>d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]}
Probab=29.03 E-value=14 Score=13.67 Aligned_cols=29 Identities=14% Similarity=0.108 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC
Q ss_conf 688999999999998469862268888507887764
Q T0547 158 EGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGI 193 (611)
Q Consensus 158 Ds~~EL~~I~~ia~~~l~v~p~IgiRv~l~~~~~g~ 193 (611)
=+.+|+..|.+.|+++ + |+|=|.++..||
T Consensus 77 yt~~e~~~lv~yA~~r-g------I~viPeiD~PGH 105 (344)
T d1yhta1 77 LSYRQLDDIKAYAKAK-G------IELIPELDSPNH 105 (344)
T ss_dssp BCHHHHHHHHHHHHHT-T------CEEEEEEEESSS
T ss_pred CCHHHHHHHHHHHHHC-C------CEEEECCCHHHH
T ss_conf 3799999999999976-9------789866532558
No 29
>d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.74 E-value=15 Score=13.51 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=43.7
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEE--EC-
Q ss_conf 546788865104873364374663014677765567788878960788860206999747751567898579999--88-
Q T0547 465 LDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIIS--IN- 541 (611)
Q Consensus 465 l~rl~e~P~~~~~l~DiTCDSDG~i~~~~~~~l~lh~~~~~~e~y~lG~FlvGAYQeiLGd~HNLfg~t~~v~v~--~~- 541 (611)
|.++++. ..+-.|..-+.|+||+++.+... -.+. ++ .|-| .|.+|+|=.-.|-- -| -.+|.|+ +.
T Consensus 23 L~~~~~~-~~~~~i~~~~Td~dGRi~~~~~~----~~~~-~G-~Y~l-~F~~~~Yf~~~g~~--~f--~p~v~i~F~v~d 90 (115)
T d1f86a_ 23 VFRKAAD-DTWEPFASGKTSESGELHGLTTE----EEFV-EG-IYKV-EIDTKSYWKALGIS--PF--HEHAEVVFTAND 90 (115)
T ss_dssp EEEECTT-SCEEEEEEEECCTTSEECCSCCT----TTCC-SE-EEEE-EECHHHHHHHTTCC--CS--EEEEEEEEEEST
T ss_pred EEEECCC-CCEEEEEEEEECCCCCCCCCCCC----CCCC-CE-EEEE-EEEHHHHHHHCCCC--CC--CCEEEEEEEECC
T ss_conf 9998899-97799999996799802676676----6677-76-7999-99879989873998--77--743899999548
Q ss_pred CCC--EEEEEEC
Q ss_conf 996--2887513
Q T0547 542 EKG--YEVEGII 551 (611)
Q Consensus 542 ~~g--~~i~~~~ 551 (611)
+.+ |.|--++
T Consensus 91 ~~~~hYHiPlll 102 (115)
T d1f86a_ 91 SGPRRYTIAALL 102 (115)
T ss_dssp TSCCEEEEEEEE
T ss_pred CCCCCEEEEEEE
T ss_conf 999835573897
No 30
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=25.90 E-value=16 Score=13.28 Aligned_cols=80 Identities=18% Similarity=0.225 Sum_probs=49.6
Q ss_pred CEEECCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHH-HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHH
Q ss_conf 43306746872788888899999998557998589874799999-99999999999999708898723787453378789
Q T0547 14 FIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQK-QIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPG 92 (611)
Q Consensus 14 F~i~~G~l~v~p~~~~~l~dlv~~l~~~~~~tPllvrf~dil~~-ri~~l~~aF~~A~~~~~Y~g~y~~vYaiKaN~~~~ 92 (611)
|.+-+..+.+ |.-.+.+|-+.+++.|...+|+|..+.+.+. ...++.+++.++ +. .+..+.-++.||...
T Consensus 4 ~~~~~~~~~f---G~g~l~~l~~~l~~~G~k~~Livt~~~~~~~g~~~~v~~~L~~~----gi--~~~vf~~v~~~p~~~ 74 (385)
T d1rrma_ 4 RMILNETAWF---GRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAA----GL--AWAIYDGVVPNPTIT 74 (385)
T ss_dssp EEECCSEEEE---STTGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHT----TC--EEEEECBCCSSCBHH
T ss_pred EEECCCCCEE---CCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHHHC----CC--EEEEECCCCCCCCHH
T ss_conf 2666997279---86899999999997699979999896556580899999999875----98--599986826997989
Q ss_pred HHHHHHHHCC
Q ss_conf 9999998466
Q T0547 93 FVKNLVKLGK 102 (611)
Q Consensus 93 Vv~~i~~~G~ 102 (611)
.|+++++.-.
T Consensus 75 ~v~~~~~~~~ 84 (385)
T d1rrma_ 75 VVKEGLGVFQ 84 (385)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9998865430
No 31
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]}
Probab=24.79 E-value=17 Score=13.14 Aligned_cols=61 Identities=10% Similarity=0.224 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEECCCCC
Q ss_conf 899999999998668987347888633887678899999999999999999971799-40587245565
Q T0547 208 STELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAK-NLKAINLGGGL 275 (611)
Q Consensus 208 ~~ei~~~i~~l~~~~~l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~~-~l~~LDIGGGl 275 (611)
.......++.+++.+.--...|+|.|.+....++..++.++++ +...|.+ .+..+|+....
T Consensus 201 ~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p~~~~i~~~l~~-------~~~~g~~I~iTEldi~~~~ 262 (364)
T d1us3a2 201 TTKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAAMKK-------VVDLGLLVKITELDVAVNQ 262 (364)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHH-------HHTTTCEEEEEEEEEESSC
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHH-------HHHCCCEEEEEEEEEECCC
T ss_conf 4678999999986899655532410025799998999999999-------9854990588740474146
No 32
>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]}
Probab=24.26 E-value=17 Score=13.07 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=17.3
Q ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 9872858889999999999852688988999999999
Q T0547 560 LEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGEL 596 (611)
Q Consensus 560 L~~v~y~~~~l~~~~~~~~~~~~~~~~~e~~~~l~~~ 596 (611)
....+++.+++.+..+.-++ +..+++++++++++.|
T Consensus 321 ~~~~~ls~~el~~l~~nsi~-~sF~~~~~K~~l~~~~ 356 (357)
T d2amxa1 321 YIHLNFTLEEFMIMNNWAFE-KSFVSDDVKSELKALY 356 (357)
T ss_dssp HHHHCCCHHHHHHHHHHHHH-HCCSCHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHH-HHCCCHHHHHHHHHHH
T ss_conf 99819899999999999999-8689999999999865
No 33
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]}
Probab=23.86 E-value=17 Score=13.01 Aligned_cols=10 Identities=20% Similarity=0.136 Sum_probs=3.3
Q ss_pred HHHHHHHHCC
Q ss_conf 9999998668
Q T0547 213 EAVNLLKENK 222 (611)
Q Consensus 213 ~~i~~l~~~~ 222 (611)
++++.+++++
T Consensus 65 ~~v~~a~~~g 74 (302)
T d1v0la_ 65 RVYNWAVQNG 74 (302)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHCC
T ss_conf 9999999879
No 34
>d2v4jb2 d.58.36.2 (B:2-135) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]}
Probab=23.49 E-value=16 Score=13.28 Aligned_cols=59 Identities=8% Similarity=0.094 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC-CCCC
Q ss_conf 89899999999998668987347888633887678899999999999999999971799405872455-6554
Q T0547 206 LTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGG-GLAV 277 (611)
Q Consensus 206 l~~~ei~~~i~~l~~~~~l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~~~l~~LDIGG-GlgV 277 (611)
++++++.++.+.+.+.+. --+||+.-.+| +-...-..++-.+..+|.+.|.+ .|| ||+|
T Consensus 72 lS~~~lR~iadIAdkYg~----G~lrfTtRqnI---Ef~~v~~~~v~~L~~eL~~~g~~------~Gg~Gfpv 131 (134)
T d2v4jb2 72 MSITHIREMCDIADKYCG----GHLRFTTRNNV---EFMVADEASLKALKEDLASRKFD------GGSLKFPI 131 (134)
T ss_dssp EEHHHHHHHHHHHHHHST----TEEEECTTSCE---EEEESSHHHHHHHHHHHHHCBCT------TSCBSSCB
T ss_pred CCHHHHHHHHHHHHHHCC----CCEEECCCCCE---EEECCCHHHHHHHHHHHHHCCCC------CCCCCCCC
T ss_conf 489999999999999787----82215477846---67349989999999999977997------78778897
No 35
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=22.41 E-value=18 Score=12.81 Aligned_cols=15 Identities=13% Similarity=0.206 Sum_probs=5.7
Q ss_pred EECCHHHHHHHHHHH
Q ss_conf 866889999999999
Q T0547 156 TIEGLNELEAIIDIA 170 (611)
Q Consensus 156 ViDs~~EL~~I~~ia 170 (611)
.+++.+||+..++.|
T Consensus 155 ~v~~~~el~~al~~a 169 (208)
T d1ybha3 155 RVTKKADLREAIQTM 169 (208)
T ss_dssp EECBHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHH
T ss_conf 728999999999999
No 36
>d1mp9a1 d.129.1.1 (A:5-96) TATA-box binding protein (TBP), C-terminal domain {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=22.29 E-value=18 Score=12.80 Aligned_cols=22 Identities=14% Similarity=0.126 Sum_probs=16.0
Q ss_pred CCCCCCEEECCCCCHHHHHHHH
Q ss_conf 8998817878898999999998
Q T0547 123 NNEGAPITVNGFKDRELINIGF 144 (611)
Q Consensus 123 g~~~~~Ii~nG~Kd~e~I~lAl 144 (611)
-+...+|+|.|.|+.++++.|+
T Consensus 59 IF~SGkivitGaks~~~~~~a~ 80 (92)
T d1mp9a1 59 IFKSGKMVVTGAKSTDELIKAV 80 (92)
T ss_dssp ECTTSEEEEECCSSHHHHHHHH
T ss_pred EECCCEEEEECCCCHHHHHHHH
T ss_conf 9858879998259999999999
No 37
>d1ciya3 f.1.3.1 (A:33-255) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=21.90 E-value=7 Score=15.99 Aligned_cols=12 Identities=8% Similarity=0.241 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999866
Q T0547 210 ELIEAVNLLKEN 221 (611)
Q Consensus 210 ei~~~i~~l~~~ 221 (611)
++.+.++.+.+.
T Consensus 43 ~~~~~ve~LId~ 54 (223)
T d1ciya3 43 AFLVQIEQLINQ 54 (223)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999989
No 38
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=21.59 E-value=19 Score=12.70 Aligned_cols=15 Identities=40% Similarity=0.279 Sum_probs=9.4
Q ss_pred CCCHHHHHHHHHHHH
Q ss_conf 678899999999999
Q T0547 238 ITEIHPLKKALNEAG 252 (611)
Q Consensus 238 I~di~~~~~ai~ea~ 252 (611)
+.+...++.+++++.
T Consensus 150 v~~~~el~~al~~a~ 164 (183)
T d2ji7a3 150 ANTPAELKAALEEAV 164 (183)
T ss_dssp ECSHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHH
T ss_conf 689999999999999
No 39
>d1auga_ c.56.4.1 (A:) Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=21.55 E-value=9.9 Score=14.85 Aligned_cols=13 Identities=8% Similarity=0.118 Sum_probs=4.9
Q ss_pred EEECCCCCCCHHH
Q ss_conf 8633887678899
Q T0547 231 HFHLGSQITEIHP 243 (611)
Q Consensus 231 HfHIGSQI~di~~ 243 (611)
...-|..+.|--.
T Consensus 136 S~daG~YlCN~~y 148 (210)
T d1auga_ 136 SYTAGTFVCNHLF 148 (210)
T ss_dssp BSCCCSSHHHHHH
T ss_pred CCCCCCCCHHHHH
T ss_conf 4897750100688
No 40
>d1iofa_ c.56.4.1 (A:) Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=21.46 E-value=10 Score=14.83 Aligned_cols=12 Identities=33% Similarity=0.473 Sum_probs=4.8
Q ss_pred EECCCHHHHHHH
Q ss_conf 337878999999
Q T0547 86 KVNQYPGFVKNL 97 (611)
Q Consensus 86 KaN~~~~Vv~~i 97 (611)
+.|+.-.+++.+
T Consensus 15 ~~NpS~~vv~~L 26 (208)
T d1iofa_ 15 KINPTERIAKDL 26 (208)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHHC
T ss_conf 878589999856
No 41
>d1ja1a2 c.23.5.2 (A:63-239) NADPH-cytochrome p450 reductase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.02 E-value=20 Score=12.61 Aligned_cols=81 Identities=15% Similarity=0.227 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEEEEEC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC---EEEEECCCCCCCCCC
Q ss_conf 9899999999998668987347888633---8876788999999999999999999717994---058724556554777
Q T0547 207 TSTELIEAVNLLKENKLLEQFTMIHFHL---GSQITEIHPLKKALNEAGNIYTELRKMGAKN---LKAINLGGGLAVEYS 280 (611)
Q Consensus 207 ~~~ei~~~i~~l~~~~~l~~L~gLHfHI---GSQI~di~~~~~ai~ea~~ly~eL~~~g~~~---l~~LDIGGGlgV~Y~ 280 (611)
.++.+..+++.++.... .|.+++|-| |+.-- ..|-.+.++ +...|.++|+.. +...|--+|.
T Consensus 83 ~P~n~~~F~~~L~~~~~--~l~~~~yaVfGlGds~Y--~~Fc~a~~~---l~~~L~~lGa~~i~~~g~~D~~~~~----- 150 (177)
T d1ja1a2 83 PTDNAQDFYDWLQETDV--DLTGVKFAVFGLGNKTY--EHFNAMGKY---VDQRLEQLGAQRIFELGLGDDDGNL----- 150 (177)
T ss_dssp ECGGGHHHHHHHHHCCC--CCTTCEEEEEEEECSSS--SSTTHHHHH---HHHHHHHTTCEESSCCEEEETTTCH-----
T ss_pred CCHHHHHHHHHHHHCCC--CCCCCEEEEEECCCCCH--HHHHHHHHH---HHHHHHHCCCCEEECCEEECCCCCC-----
T ss_conf 87769999998873120--23575378882588567--999799999---9999997699397865015079995-----
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 777777778888999999999999999
Q T0547 281 QFKNEKSRNYTLREYANDVVFILKNIA 307 (611)
Q Consensus 281 ~~~~~~s~ny~l~eya~~Iv~~i~~~c 307 (611)
.. .+++|...+..++++.+
T Consensus 151 ----e~----~~~~W~~~l~~~L~~~~ 169 (177)
T d1ja1a2 151 ----EE----DFITWREQFWPAVCEFF 169 (177)
T ss_dssp ----HH----HHHHHHHHHHHHHHHHH
T ss_pred ----HH----HHHHHHHHHHHHHHHHC
T ss_conf ----78----99999999999999983
No 42
>d1b6ra1 b.84.2.1 (A:277-355) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain {Escherichia coli [TaxId: 562]}
Probab=20.93 E-value=20 Score=12.60 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=25.7
Q ss_pred CCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 89988178788989999999985423571048986688999999999998
Q T0547 123 NNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKE 172 (611)
Q Consensus 123 g~~~~~Ii~nG~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~ 172 (611)
..|...+..=| |+. | -+||+|| ++++-++.+|+..-++..++
T Consensus 20 ~~p~~~lH~Yg-Ke~---R---pgRKmGH-iti~~~d~~~l~~~~~~l~~ 61 (79)
T d1b6ra1 20 KLPLVHLHWYD-KEV---R---PGRKVGH-LNLTDSDTSRLTATLEALIP 61 (79)
T ss_dssp GSTTEEEEECC-CCC---C---TTCEEEE-EEEECSCHHHHHHHHHHHST
T ss_pred HCCCCEEEECC-CCC---C---CCCEEEE-EEEECCCHHHHHHHHHHHHH
T ss_conf 18996776127-620---7---7842577-87514998999999999998
No 43
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.85 E-value=20 Score=12.59 Aligned_cols=59 Identities=15% Similarity=0.049 Sum_probs=28.7
Q ss_pred CC-CCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 48-998817878898999999998542357104898668899999999999846986226888
Q T0547 122 YN-NEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLR 183 (611)
Q Consensus 122 ~g-~~~~~Ii~nG~Kd~e~I~lAl~a~~lG~~v~IViDs~~EL~~I~~ia~~~l~v~p~IgiR 183 (611)
++ .++.+|.==||---..... .+.+.|.+++-+--|.+.++...+.+++ .+..-++-++
T Consensus 57 l~l~~G~~VLDiGCG~G~~~~~--~a~~~g~~v~git~s~~q~~~a~~~~~~-~~l~~~v~~~ 116 (291)
T d1kpia_ 57 LNLEPGMTLLDIGCGWGSTMRH--AVAEYDVNVIGLTLSENQYAHDKAMFDE-VDSPRRKEVR 116 (291)
T ss_dssp TCCCTTCEEEEETCTTSHHHHH--HHHHHCCEEEEEESCHHHHHHHHHHHHH-SCCSSCEEEE
T ss_pred CCCCCCCEEEEECCCCHHHHHH--HHHHCCCCEEECCCHHHHHHHHHHHHHH-HCCCHHHHHH
T ss_conf 3999999788745762589999--9986475303105208899999999875-1111134455
No 44
>d1qnaa1 d.129.1.1 (A:17-115) TATA-box binding protein (TBP), C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.77 E-value=20 Score=12.58 Aligned_cols=21 Identities=10% Similarity=0.208 Sum_probs=10.9
Q ss_pred CCCCCEEECCCCCHHHHHHHH
Q ss_conf 998817878898999999998
Q T0547 124 NEGAPITVNGFKDRELINIGF 144 (611)
Q Consensus 124 ~~~~~Ii~nG~Kd~e~I~lAl 144 (611)
+...+++|.|.|+.++++.|+
T Consensus 58 F~SGKivitGaks~~~~~~a~ 78 (99)
T d1qnaa1 58 FASGKMVCTGAKSEDFSKMAA 78 (99)
T ss_dssp ETTSEEEEEEESSHHHHHHHH
T ss_pred ECCCEEEEECCCCHHHHHHHH
T ss_conf 769779996469999999999
No 45
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]}
Probab=20.53 E-value=20 Score=12.54 Aligned_cols=58 Identities=17% Similarity=0.331 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHCCC-CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEECCC
Q ss_conf 8999999999986689-87347888633887678899999999999999999971799-405872455
Q T0547 208 STELIEAVNLLKENKL-LEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAK-NLKAINLGG 273 (611)
Q Consensus 208 ~~ei~~~i~~l~~~~~-l~~L~gLHfHIGSQI~di~~~~~ai~ea~~ly~eL~~~g~~-~l~~LDIGG 273 (611)
...+...++.+++.+. ++ -.|+.+|++....++..++..+.+ +.++|.+ .+..+||..
T Consensus 183 ~~~~~~lv~~l~~~GvpiD-gIGlQ~H~~~~~~~~~~i~~~l~~-------~~~lg~~i~iTElDv~~ 242 (350)
T d1ur1a_ 183 REATVEMIERLQKRGMPIH-GLGIQGHLGIDTPPIAEIEKSIIA-------FAKLGLRVHFTSLDVDV 242 (350)
T ss_dssp HHHHHHHHHHHHHTTCCCC-EEEECCEEESSCSCHHHHHHHHHH-------HHTTTCEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHCCCCCE-EEEEEEECCCCCCCHHHHHHHHHH-------HHHCCCCEEECCCCEEC
T ss_conf 2779999999996899711-899724515899999999999999-------98639713533344330
Done!