Query T0552 BtR376, , 122 residues
Match_columns 122
No_of_seqs 48 out of 50
Neff 2.9
Searched_HMMs 15564
Date Fri May 21 18:06:42 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0552.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0552.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pkoa_ b.1.1.1 (A:) Myelin ol 83.5 1.8 0.00011 22.1 6.9 92 13-106 3-107 (126)
2 d1n4xl_ b.1.1.1 (L:) Immunoglo 76.1 2 0.00013 21.9 4.3 48 15-62 5-53 (113)
3 d1v8ha1 b.1.18.19 (A:2-107) Su 76.1 3.1 0.0002 20.6 11.0 92 12-113 1-104 (106)
4 d1nezg_ b.1.1.1 (G:) CD8 {Mous 71.1 4 0.00026 20.0 4.9 41 14-58 3-43 (122)
5 d1etzb1 b.1.1.1 (B:1-126) Immu 68.8 4.6 0.0003 19.6 4.8 92 20-112 8-125 (126)
6 d2agjh1 b.1.1.1 (H:1-120) Immu 68.5 4.3 0.00028 19.7 4.6 38 22-60 10-48 (120)
7 d1epfa1 b.1.1.4 (A:1-97) Neura 60.8 6.6 0.00042 18.6 10.3 91 14-113 2-93 (97)
8 d1r0ah1 b.1.1.1 (H:1-123) Immu 59.1 7 0.00045 18.4 4.9 41 21-62 9-50 (123)
9 d2gsia1 b.1.1.1 (A:1-107) Immu 57.2 6.9 0.00044 18.5 3.9 40 23-62 12-51 (111)
10 d1hxma1 b.1.1.1 (A:1-120) T-ce 56.0 7.9 0.00051 18.1 4.6 36 24-62 13-49 (120)
11 d1j05a_ b.1.1.1 (A:) Immunoglo 54.0 7.9 0.00051 18.1 3.8 37 24-60 13-49 (111)
12 d1i9ea_ b.1.1.1 (A:) T-cell an 53.1 7.9 0.00051 18.1 3.7 42 15-60 3-44 (115)
13 d1q9rb1 b.1.1.1 (B:1-111) Immu 50.8 8.3 0.00054 18.0 3.5 39 21-62 9-48 (122)
14 d1bd2d1 b.1.1.1 (D:1-117) T-ce 49.4 10 0.00065 17.5 4.5 36 23-62 11-46 (111)
15 d3bp5a1 b.1.1.1 (A:1-114) Prog 49.0 10 0.00066 17.4 5.5 43 15-61 2-45 (114)
16 d1mjul1 b.1.1.1 (L:1-107) Immu 48.6 8.5 0.00055 17.9 3.3 37 24-60 13-50 (112)
17 d1yjdc1 b.1.1.1 (C:1-118) CD28 46.5 11 0.00072 17.2 5.0 45 3-59 1-45 (118)
18 d1ai1h1 b.1.1.1 (H:1-112) Immu 46.4 11 0.00072 17.2 5.2 40 22-62 10-50 (120)
19 d1akjd_ b.1.1.1 (D:) CD8 {Huma 44.8 12 0.00076 17.0 4.5 41 15-58 3-43 (114)
20 d1iama1 b.1.1.3 (A:83-185) Int 44.5 12 0.00077 17.0 5.1 81 11-104 3-84 (103)
21 d1j8hd1 b.1.1.1 (D:1-117) T-ce 44.2 12 0.00078 17.0 3.8 42 15-60 3-44 (115)
22 d1vcaa2 b.1.1.4 (A:1-90) Vascu 41.0 12 0.00076 17.1 3.0 77 13-105 1-79 (90)
23 d1lgva1 b.1.1.1 (A:1-112) Immu 38.6 15 0.00095 16.4 3.9 39 23-62 11-49 (112)
24 d1ncwl1 b.1.1.1 (L:1-107) Immu 38.0 15 0.00098 16.4 4.0 44 19-62 8-52 (112)
25 d1ac6a_ b.1.1.1 (A:) T-cell an 37.6 15 0.00099 16.3 4.5 44 15-62 3-46 (110)
26 d1c5cl1 b.1.1.1 (L:1-107) Immu 36.7 16 0.001 16.3 5.1 39 19-61 8-46 (107)
27 d1tjgl1 b.1.1.1 (L:1-107) Immu 36.4 16 0.001 16.2 4.0 37 22-62 11-47 (107)
28 d1w72l1 b.1.1.1 (L:1-107) Immu 36.3 16 0.001 16.2 3.1 35 24-62 12-46 (109)
29 d1qfoa_ b.1.1.1 (A:) N-termina 36.2 16 0.001 16.2 3.8 45 19-63 7-53 (118)
30 d1jhll_ b.1.1.1 (L:) Immunoglo 36.1 16 0.001 16.2 4.9 41 18-62 7-47 (108)
31 d1wc9a_ d.278.1.2 (A:) Traffic 36.0 16 0.001 16.2 3.5 30 10-39 130-159 (161)
32 d2bnqd1 b.1.1.1 (D:2-114) T-ce 35.9 16 0.0011 16.2 3.7 39 15-58 3-42 (113)
33 d1ogae1 b.1.1.1 (E:5-118) T-ce 34.7 17 0.0011 16.1 3.7 42 16-62 3-44 (114)
34 d1ibya_ b.6.1.4 (A:) Red coppe 34.0 5.1 0.00033 19.3 0.2 15 21-35 39-53 (112)
35 d1i3ua_ b.1.1.1 (A:) Camelid I 33.9 18 0.0011 16.0 4.0 39 21-62 9-48 (127)
36 d1u9ka_ b.1.1.1 (A:) TREM-1 (t 33.1 11 0.0007 17.3 1.8 36 21-59 4-40 (110)
37 d2fx7l1 b.1.1.1 (L:1-107) Immu 32.6 19 0.0012 15.9 3.8 42 18-62 7-48 (108)
38 d1f97a1 b.1.1.1 (A:27-128) Jun 32.3 19 0.0012 15.8 7.6 87 14-107 3-92 (102)
39 d1sq2n_ b.1.1.1 (N:) Novel ant 32.1 19 0.0012 15.8 5.0 41 17-59 4-44 (112)
40 d2ntsp1 b.1.1.1 (P:3-118) T-ce 32.0 19 0.0012 15.8 5.1 40 17-62 4-44 (113)
41 d1914a1 d.49.1.1 (A:4004-4081) 31.5 17 0.0011 16.1 2.6 27 43-69 20-46 (78)
42 d1uzva_ b.115.1.1 (A:) Fucose- 31.3 11 0.00069 17.3 1.5 24 78-102 11-34 (114)
43 d1k0ha_ b.106.1.2 (A:) Tail at 30.4 9.4 0.0006 17.7 1.1 37 13-60 65-101 (117)
44 d2g5ra1 b.1.1.1 (A:24-144) N-t 30.4 20 0.0013 15.6 3.3 41 19-59 8-51 (121)
45 d1q9ra1 b.1.1.1 (A:1-107) Immu 29.9 21 0.0013 15.6 4.3 44 18-61 7-52 (113)
46 d8faba1 b.1.1.1 (A:3-105) Immu 28.8 20 0.0013 15.7 2.5 35 24-62 10-44 (103)
47 d1h5ba_ b.1.1.1 (A:) T-cell an 28.8 22 0.0014 15.5 4.1 39 19-62 8-46 (113)
48 d1u3ha1 b.1.1.1 (A:2-116) T-ce 27.9 22 0.0014 15.4 4.3 35 23-61 10-44 (110)
49 d1tola2 d.212.1.1 (A:125-216) 27.6 22 0.0014 15.4 2.6 26 18-44 20-45 (92)
50 d2chha1 b.115.1.1 (A:1-113) Ma 26.8 14 0.00093 16.5 1.5 24 78-101 11-34 (113)
51 d2cuaa_ b.6.1.2 (A:) Cytochrom 26.6 8.3 0.00053 18.0 0.3 13 23-35 50-62 (122)
52 d1ncna_ b.1.1.1 (A:) CD86 (b7- 26.1 24 0.0015 15.2 4.1 44 24-67 6-49 (110)
53 d1i8lc_ b.1.1.1 (C:) Immunorec 26.0 24 0.0016 15.2 4.0 87 24-111 11-114 (118)
54 d1fo0b_ b.1.1.1 (B:) T-cell an 26.0 24 0.0016 15.1 5.6 43 15-61 4-46 (112)
55 d1914a1 d.49.1.1 (A:4004-4081) 25.9 23 0.0015 15.3 2.4 27 43-69 20-46 (78)
56 d2rhea_ b.1.1.1 (A:) Immunoglo 25.8 24 0.0016 15.1 2.9 38 23-62 11-48 (114)
57 d2aq2a1 b.1.1.1 (A:1-117) T-ce 25.8 24 0.0016 15.1 5.2 43 15-62 4-46 (110)
58 d2ak4d1 b.1.1.1 (D:1-116) T-ce 25.6 25 0.0016 15.1 3.9 40 19-62 7-47 (114)
59 d1lr0a_ d.212.1.1 (A:) TolA {P 25.5 23 0.0015 15.2 2.4 29 17-45 39-67 (126)
60 d1ymmd1 b.1.1.1 (D:9-104) T-ce 25.3 14 0.00092 16.5 1.3 31 24-60 5-36 (96)
61 d1tvda_ b.1.1.1 (A:) T-cell an 25.2 25 0.0016 15.1 4.0 69 18-89 6-84 (116)
62 d1eaja_ b.1.1.1 (A:) Coxsackie 24.9 25 0.0016 15.0 3.5 82 22-104 14-112 (124)
63 d1g6ga_ b.26.1.2 (A:) Phosphot 24.9 20 0.0013 15.7 2.0 47 57-105 79-125 (127)
64 d1n0xh1 b.1.1.1 (H:1-113) Immu 24.8 25 0.0016 15.0 4.6 41 19-62 7-48 (127)
65 d1nfde1 b.1.1.1 (E:2-107) Immu 24.6 25 0.0016 15.1 2.4 34 25-62 12-45 (108)
66 d1bwwa_ b.1.1.1 (A:) Immunoglo 23.3 27 0.0017 14.8 4.8 40 19-62 10-49 (109)
67 d1txka1 b.1.18.2 (A:397-511) G 23.3 26 0.0017 15.0 2.3 11 30-40 90-100 (115)
68 d1nbqa1 b.1.1.1 (A:25-129) Jun 22.9 28 0.0018 14.8 7.8 89 12-107 4-95 (105)
69 d2bnub1 b.1.1.1 (B:2-113) T-ce 22.8 28 0.0018 14.8 5.9 43 15-62 2-44 (112)
70 d1gsma1 b.1.1.4 (A:1-90) Mucos 22.7 25 0.0016 15.1 2.1 40 12-55 3-42 (90)
71 d1d3ii_ i.6.1.1 (I:) HRV14 com 22.5 28 0.0018 14.7 4.0 36 15-52 89-124 (185)
72 d2fx7h1 b.1.1.1 (H:1-113) Immu 22.4 28 0.0018 14.7 4.2 38 22-62 10-48 (127)
73 d1f97a2 b.1.1.4 (A:129-238) Ju 22.4 28 0.0018 14.7 5.8 85 16-106 6-93 (110)
74 d2ck0h1 b.1.1.1 (H:1-106) Immu 21.0 30 0.0019 14.5 5.1 40 21-62 9-48 (109)
75 d1kgce1 b.1.1.1 (E:3-118) T-ce 21.0 30 0.0019 14.5 4.5 38 18-60 5-42 (112)
76 d1lp9e1 b.1.1.1 (E:0-117) T-ce 20.8 31 0.002 14.5 3.9 39 19-61 8-46 (115)
No 1
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=83.49 E-value=1.8 Score=22.09 Aligned_cols=92 Identities=16% Similarity=0.252 Sum_probs=50.2
Q ss_pred CEEEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE-CCCCEECCCC--CC---------CCCCCE
Q ss_conf 53687323312048973799988710786047568998886689679885-8984662555--65---------178871
Q T0552 13 FSIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM-SDGTVLLPND--LY---------PLPGET 80 (122)
Q Consensus 13 F~v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~-~dg~~l~pnD--~y---------pL~~e~ 80 (122)
|+|..=+-+=....|++|.+.|.+... .....+.|+++...+.+.+.. .+|....... .| .+.+..
T Consensus 3 ~~V~~p~~~V~~~~G~~v~L~C~~~~~--~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (126)
T d1pkoa_ 3 FRVIGPGHPIRALVGDEAELPCRISPG--KNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGK 80 (126)
T ss_dssp CEEECCSSCEEEETTSCEEEEEEEESC--CCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTE
T ss_pred EEEECCCCCEEEECCCCEEEEEEEECC--CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCE
T ss_conf 799887988799869859999998775--798720899960477623788872466564216651016887520266886
Q ss_pred EEEEECCCCC-CCCEEEEEEEECCCCE
Q ss_conf 8999803688-7742799998288865
Q T0552 81 FRLYYTSAST-DQQTVDVYFQDSFGQL 106 (122)
Q Consensus 81 FrLYYtS~s~-~~q~idv~veDnfgq~ 106 (122)
+.|.-++... |+-...-.|.+..|..
T Consensus 81 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~ 107 (126)
T d1pkoa_ 81 VALRIQNVRFSDEGGYTCFFRDHSYQE 107 (126)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred EEEEEEEECHHHCEEEEEEEEECCCEE
T ss_conf 999998875467869999999789779
No 2
>d1n4xl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}
Probab=76.15 E-value=2 Score=21.85 Aligned_cols=48 Identities=17% Similarity=0.387 Sum_probs=31.6
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEE-EEEECCCEEEEE
Q ss_conf 687323312048973799988710786047568998-886689679885
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIR-YFQPDGAGTLKM 62 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IR-YFQ~dG~G~L~~ 62 (122)
|+-.|.--....|++|.|.|.....-......|.|. |=|..|++-..+
T Consensus 5 ltQ~P~s~~~~~G~svtl~C~~s~~~~~~~~~~~~~WYrQ~~g~~p~~l 53 (113)
T d1n4xl_ 5 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLL 53 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCCCTTSCCCEEEEEECTTSCCEEE
T ss_pred EECCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEE
T ss_conf 8682998898899989999995665344898207689962889851799
No 3
>d1v8ha1 b.1.18.19 (A:2-107) Sulfur oxidation protein SoxZ {Thermus thermophilus [TaxId: 274]}
Probab=76.11 E-value=3.1 Score=20.61 Aligned_cols=92 Identities=16% Similarity=0.310 Sum_probs=61.8
Q ss_pred CCEEEEEECCHHCCCCCEEEEEEEEEE----------CCCCCCCEEEEEEEE--ECCCEEEEECCCCEECCCCCCCCCCC
Q ss_conf 853687323312048973799988710----------786047568998886--68967988589846625556517887
Q T0552 12 PFSIETMPVPKKLKVGETAEIRCQLHR----------DGRFEETKYFIRYFQ--PDGAGTLKMSDGTVLLPNDLYPLPGE 79 (122)
Q Consensus 12 pF~v~tmPv~k~I~~GetvEIRc~L~r----------eG~y~~t~Y~IRYFQ--~dG~G~L~~~dg~~l~pnD~ypL~~e 79 (122)
||.+..=.-|++...|+.+++|+-+.- .|.+-. ..+|..+. .+|+-.+.++-+...-.| -
T Consensus 1 p~r~~~r~~p~~~~~G~v~~vk~li~HPMeTG~r~d~~g~~IP-a~~I~~v~v~~ng~~v~~a~~~~svS~N-------P 72 (106)
T d1v8ha1 1 PFRTIARLNPAKPKAGEEFRLQVVAQHPNEPGTRRDAEGKLIP-AKYINLVEVYFEGEKVAEARPGPSTSAN-------P 72 (106)
T ss_dssp CCCEEEEEESSSCCTTCEEEEEEEECCCCBCSCCBCTTSCBCC-CBCEEEEEEEETTEEEEEECCCSSCCSS-------C
T ss_pred CCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEC-HHHEEEEEEEECCEEEEEEECCCCCCCC-------C
T ss_conf 9138998677755899859999998787853201288899914-7803899999999999999827852379-------7
Q ss_pred EEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEE
Q ss_conf 1899980368877427999982888658999853
Q T0552 80 TFRLYYTSASTDQQTVDVYFQDSFGQLQQLTFSF 113 (122)
Q Consensus 80 ~FrLYYtS~s~~~q~idv~veDnfgq~~ql~f~F 113 (122)
-|++++...... ++.+-..||.|+..+-+..-
T Consensus 73 ~~~F~~~~~~~g--~l~v~~~Dn~G~~~~~~~~I 104 (106)
T d1v8ha1 73 LYAFKFKAEKAG--TFTIKLKDTDGDTGEASVKL 104 (106)
T ss_dssp EEEEEEECCSCE--EEEEEEEETTSCEEEEEEEE
T ss_pred EEEEEECCCCCC--EEEEEEEECCCCEEEEEEEE
T ss_conf 489998269884--69999998989889999998
No 4
>d1nezg_ b.1.1.1 (G:) CD8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.12 E-value=4 Score=19.96 Aligned_cols=41 Identities=12% Similarity=0.251 Sum_probs=28.4
Q ss_pred EEEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCE
Q ss_conf 368732331204897379998871078604756899888668967
Q T0552 14 SIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAG 58 (122)
Q Consensus 14 ~v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G 58 (122)
+|.-.|-.-....||+|+|.|.+.....+ +.-=|.|..|++
T Consensus 3 ~~~~~P~~~~~~~G~~vtL~C~~~~~~~~----~v~Wyrq~~g~~ 43 (122)
T d1nezg_ 3 ELRIFPKKMDAELGQKVDLVCEVLGSVSQ----GCSWLFQNSSSK 43 (122)
T ss_dssp EEEEESSCEEECTTCCEEEEEEEESCCSS----CEEEEEEESSCS
T ss_pred CEEECCCEEEECCCCCEEEEEEECCCCCC----CEEEEEECCCCC
T ss_conf 46983997898899979999997276489----889999899987
No 5
>d1etzb1 b.1.1.1 (B:1-126) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 6 [TaxId: 10090]}
Probab=68.81 E-value=4.6 Score=19.56 Aligned_cols=92 Identities=22% Similarity=0.294 Sum_probs=51.7
Q ss_pred CCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEE-EECCCEEEEE----CCCC-EECC--CCCCCCC----CCEEEEEECC
Q ss_conf 331204897379998871078604756899888-6689679885----8984-6625--5565178----8718999803
Q T0552 20 VPKKLKVGETAEIRCQLHRDGRFEETKYFIRYF-QPDGAGTLKM----SDGT-VLLP--NDLYPLP----GETFRLYYTS 87 (122)
Q Consensus 20 v~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYF-Q~dG~G~L~~----~dg~-~l~p--nD~ypL~----~e~FrLYYtS 87 (122)
-+.-+++||++-+-|+ .....+++..|.|.+. |+-|+|-..+ .+|. .+-| ..|.-.. +..+.|=-++
T Consensus 8 G~~lvkPg~sv~LsC~-~SG~s~s~~~~~~~W~RQ~pg~~le~l~~i~~~~~~~~~~s~~~Rftis~d~s~~t~~L~i~~ 86 (126)
T d1etzb1 8 GPGILQPSQTLSLTCS-FSGFSLSTSGMGVGWIRQPSGEGLEWLADIWWNDKKYYNPSLKSRLTVSKDTSSNQVFLKITS 86 (126)
T ss_dssp CCSEECTTCCEEEEEE-EESSCTTSTTEEEEEEEEETTTCCEEEEEEETTCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred CCCEECCCCCEEEEEE-EECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCEECEEEEEEEEEECCCCCCEEECCEEC
T ss_conf 9805999999798899-938755789998869967777460575303789874112003473488226677378734401
Q ss_pred CCCC--------------CCEEEEEEEECCCCEEEEEEE
Q ss_conf 6887--------------742799998288865899985
Q T0552 88 ASTD--------------QQTVDVYFQDSFGQLQQLTFS 112 (122)
Q Consensus 88 ~s~~--------------~q~idv~veDnfgq~~ql~f~ 112 (122)
+..+ ...-..++-|.|||=-+++.+
T Consensus 87 l~~eDtAvYyCAr~~~~~~~~~~~~~fd~WG~GT~VTVs 125 (126)
T d1etzb1 87 VDTSDTATYHCARRTFSYYYGSSFYYFDNWGQGTTLTVS 125 (126)
T ss_dssp CCGGGCEEEEEEEEEEEEETTEEEEEEEEECCCEEEEEC
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 451354168877862432478866554211999189971
No 6
>d2agjh1 b.1.1.1 (H:1-120) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}
Probab=68.48 E-value=4.3 Score=19.75 Aligned_cols=38 Identities=18% Similarity=0.250 Sum_probs=29.4
Q ss_pred HHCCCCCEEEEEEEEEECCCCCCCEEEEEEE-EECCCEEE
Q ss_conf 1204897379998871078604756899888-66896798
Q T0552 22 KKLKVGETAEIRCQLHRDGRFEETKYFIRYF-QPDGAGTL 60 (122)
Q Consensus 22 k~I~~GetvEIRc~L~reG~y~~t~Y~IRYF-Q~dG~G~L 60 (122)
.-+.+||+|-|-|++- ...++...|.|-++ |.-|+|--
T Consensus 10 ~~v~PG~sv~LsC~~S-G~s~ss~~~~~~WyRQ~Pg~~le 48 (120)
T d2agjh1 10 TLVKPTQTLTLTCTFS-GFSLTTTGEGVGWIRQPPGKALE 48 (120)
T ss_dssp SBCCSSSEEEEEEEEE-SCCTTSSSCEEEEEEECTTSCCE
T ss_pred EEECCCCCEEEEEEEC-CCCCCCCCCEEEECCCCCCCCCE
T ss_conf 0699999989899874-66756888717602035655621
No 7
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=60.79 E-value=6.6 Score=18.62 Aligned_cols=91 Identities=19% Similarity=0.277 Sum_probs=58.2
Q ss_pred EEEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCEECCCCCCCCCCCEEEEEECCCCC-CC
Q ss_conf 36873233120489737999887107860475689988866896798858984662555651788718999803688-77
Q T0552 14 SIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKMSDGTVLLPNDLYPLPGETFRLYYTSAST-DQ 92 (122)
Q Consensus 14 ~v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~~dg~~l~pnD~ypL~~e~FrLYYtS~s~-~~ 92 (122)
.|+..|-...+..|+++.+.|... |.=. .-.|.|+.++|+-.........+..+ .....+|.-.+... |+
T Consensus 2 ~V~i~P~~~~v~~G~~~~l~C~v~--g~p~--~~~v~W~~~~g~~~~~~~~~~~~~~~-----~~~~~~L~I~~~~~~D~ 72 (97)
T d1epfa1 2 QVDIVPSQGEISVGESKFFLCQVA--GDAK--DKDISWFSPNGEKLSPNQQRISVVWN-----DDDSSTLTIYNANIDDA 72 (97)
T ss_dssp CEEEESSSEEEETTCCEEEEEEEC--CCSC--CCEEEEECTTSCEECCBSSSEEEEEE-----ETTEEEEEECSCCGGGC
T ss_pred EEEEECCCEEECCCCCEEEEEEEE--ECCC--CCEEEEEEEEEEEEEECCCCEEEEEE-----CCCCEEEECCCCCHHHC
T ss_conf 899978988992699199999997--0568--98899998630111101450788750-----68632888366762136
Q ss_pred CEEEEEEEECCCCEEEEEEEE
Q ss_conf 427999982888658999853
Q T0552 93 QTVDVYFQDSFGQLQQLTFSF 113 (122)
Q Consensus 93 q~idv~veDnfgq~~ql~f~F 113 (122)
-.....+....|+..+-++..
T Consensus 73 G~Y~C~a~N~~G~~~~~tv~l 93 (97)
T d1epfa1 73 GIYKCVVTAEDGTQSEATVNV 93 (97)
T ss_dssp EEEEEEEEETTTEEEEEEEEE
T ss_pred EEEEEEEEECCCCEEEEEEEE
T ss_conf 378999996999589999999
No 8
>d1r0ah1 b.1.1.1 (H:1-123) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 6 [TaxId: 10090]}
Probab=59.10 E-value=7 Score=18.44 Aligned_cols=41 Identities=15% Similarity=0.328 Sum_probs=29.8
Q ss_pred CHHCCCCCEEEEEEEEEECCCCCCCEEEEEEE-EECCCEEEEE
Q ss_conf 31204897379998871078604756899888-6689679885
Q T0552 21 PKKLKVGETAEIRCQLHRDGRFEETKYFIRYF-QPDGAGTLKM 62 (122)
Q Consensus 21 ~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYF-Q~dG~G~L~~ 62 (122)
+.-+++||++.|-|.. ....|+...|.+-++ |+-|+|--.+
T Consensus 9 ~~~vkpg~sv~LsC~~-SG~s~s~~~y~~~W~RQ~pGkgle~i 50 (123)
T d1r0ah1 9 PGIVQPSQPFRLTCTF-SGFSLSTSGIGVTWIRQPSGKGLEWL 50 (123)
T ss_dssp CSEECTTCCEEEEEEE-ESSCTTSTTEEEEEEEEETTSCCEEE
T ss_pred CCEECCCCCEEEEEEE-CCCCCCCCCCEEECCCCCCCCCEEEE
T ss_conf 9259999995988989-38865789870642355999630764
No 9
>d2gsia1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 2 [TaxId: 10090]}
Probab=57.22 E-value=6.9 Score=18.49 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=26.3
Q ss_pred HCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 2048973799988710786047568998886689679885
Q T0552 23 KLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 23 ~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
....|++|.|+|+....-.-.+..|.-=|-|..|++-..+
T Consensus 12 s~~~G~svtL~C~~s~~~~~~~~~~i~WYrQ~pg~~~~~l 51 (111)
T d2gsia1 12 AVSLGQPATISCGASKSVRTSGYSYMDWNQQKPGQPPRRL 51 (111)
T ss_dssp EEETTSCEEEEEEESSCCCCSSSCCEEEEEECTTSCCEEE
T ss_pred EECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEE
T ss_conf 8999999999999799975698652289998999952999
No 10
>d1hxma1 b.1.1.1 (A:1-120) T-cell antigen receptor {Human (Homo sapiens), gamma-chain [TaxId: 9606]}
Probab=55.95 E-value=7.9 Score=18.12 Aligned_cols=36 Identities=22% Similarity=0.568 Sum_probs=24.2
Q ss_pred CCCCCEEEEEEEEEECCCCCCCEEEEE-EEEECCCEEEEE
Q ss_conf 048973799988710786047568998-886689679885
Q T0552 24 LKVGETAEIRCQLHRDGRFEETKYFIR-YFQPDGAGTLKM 62 (122)
Q Consensus 24 I~~GetvEIRc~L~reG~y~~t~Y~IR-YFQ~dG~G~L~~ 62 (122)
+..|++|.|+|++. .+.+.+ |.|- |-|.-|+|-..+
T Consensus 13 v~~G~~vtL~C~~s-~~~~~~--~~~~WyrQ~pg~~~~~l 49 (120)
T d1hxma1 13 VSIGVPATLRCSMK-GEAIGN--YYINWYRKTQGNTMTFI 49 (120)
T ss_dssp EETTCCEEEEEEEC-SSCGGG--SEEEEEEEESSSCSEEE
T ss_pred ECCCCCEEEEEEEE-CCCCCC--CCCEEEECCCCCCCEEE
T ss_conf 88899999999990-357668--84717872644455020
No 11
>d1j05a_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 2 [TaxId: 10090]}
Probab=54.03 E-value=7.9 Score=18.12 Aligned_cols=37 Identities=16% Similarity=0.290 Sum_probs=26.0
Q ss_pred CCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEE
Q ss_conf 0489737999887107860475689988866896798
Q T0552 24 LKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTL 60 (122)
Q Consensus 24 I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L 60 (122)
..+|++|.|.|.......-.+..|..=|=|..|++--
T Consensus 13 v~~G~svtl~C~~s~s~~~~~~~~~~WYrq~~g~~p~ 49 (111)
T d1j05a_ 13 VSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPK 49 (111)
T ss_dssp CCTTSCEEEEEEESSCCBSSSCBCEEEEEECTTSCCE
T ss_pred ECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCE
T ss_conf 8899989999996667856895658989745898889
No 12
>d1i9ea_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}
Probab=53.13 E-value=7.9 Score=18.13 Aligned_cols=42 Identities=19% Similarity=0.362 Sum_probs=29.7
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEE
Q ss_conf 6873233120489737999887107860475689988866896798
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTL 60 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L 60 (122)
|.--|..-.+..|++|.|+|...-. ..-|..-|-|..|++--
T Consensus 3 V~Q~~~~v~v~~G~svtl~C~~~~~----~~~~~~Wyrq~pg~~~~ 44 (115)
T d1i9ea_ 3 VTQPDARVTVSEGASLQLRCKYSYS----ATPYLFWYVQYPRQGLQ 44 (115)
T ss_dssp EECCCSEEEEETTSCEEECCEEECS----SCCEEEEEEECTTSCCE
T ss_pred EECCCCEEEECCCCCEEEEEEECCC----CCCCEEEEEECCCCCEE
T ss_conf 8837996999799979999997279----88988999989888605
No 13
>d1q9rb1 b.1.1.1 (B:1-111) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 1 [TaxId: 10090]}
Probab=50.83 E-value=8.3 Score=17.98 Aligned_cols=39 Identities=18% Similarity=0.423 Sum_probs=28.8
Q ss_pred CHHCCCCCEEEEEEEEEECCCCCCCEEEEEEE-EECCCEEEEE
Q ss_conf 31204897379998871078604756899888-6689679885
Q T0552 21 PKKLKVGETAEIRCQLHRDGRFEETKYFIRYF-QPDGAGTLKM 62 (122)
Q Consensus 21 ~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYF-Q~dG~G~L~~ 62 (122)
+.-+++|+++-|-|+.- ...+. .|.|-++ |+-|||--++
T Consensus 9 ~~~vkpg~sl~LsC~~S-G~s~~--~y~~~WvRQ~PGkglewv 48 (122)
T d1q9rb1 9 GGLVQSGGSLRLSCATS-GFTFT--DYYMSWVRQPPGKALEWL 48 (122)
T ss_dssp CCEECTTCCEEEEEEEE-SSCGG--GSCEEEEEECTTSCCEEE
T ss_pred CCEECCCCCEEEEEEEC-CCCCC--CCCCCCCCCCCCCCEEEE
T ss_conf 84599999979889990-89876--883170114898640433
No 14
>d1bd2d1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}
Probab=49.40 E-value=10 Score=17.48 Aligned_cols=36 Identities=17% Similarity=0.392 Sum_probs=26.5
Q ss_pred HCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 2048973799988710786047568998886689679885
Q T0552 23 KLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 23 ~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
.+..|++|.|+|..... ...|..-|-|..|++-..+
T Consensus 11 ~~~~G~svtl~C~~s~~----~~~~~~WYrq~~g~~~~~l 46 (111)
T d1bd2d1 11 SVQEGRISILNCDYTNS----MFDYFLWYKKYPAEGPTFL 46 (111)
T ss_dssp EEETTSCEEEEEEECCT----TCCEEEEEEECTTSCCEEE
T ss_pred EECCCCCEEEEEEECCC----CCCEEEEEEECCCCCCEEE
T ss_conf 99199999999980899----9881899998899841020
No 15
>d3bp5a1 b.1.1.1 (A:1-114) Programmed cell death protein 1, PD1, extracellular domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.97 E-value=10 Score=17.44 Aligned_cols=43 Identities=19% Similarity=0.193 Sum_probs=28.5
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEE-EEEEECCCEEEE
Q ss_conf 68732331204897379998871078604756899-888668967988
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFI-RYFQPDGAGTLK 61 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~I-RYFQ~dG~G~L~ 61 (122)
|.--|-.-....|++|.|.|...-.. . .|.| -|-|..|++-.+
T Consensus 2 vtqsP~~l~v~~G~~vtl~C~~~~~~---~-~~~~~Wyrq~~g~~p~~ 45 (114)
T d3bp5a1 2 LTFYPAWLTVSEGANATFTCSLSNWS---E-DLMLNWNRLSPSNQTEK 45 (114)
T ss_dssp EEEESSEEEEETTCCEEEEEEESCCC---T-TCEEEEEEECTTCCEEE
T ss_pred CEECCCEEEECCCCCEEEEEEECCCC---C-CCEEEEEEECCCCCCEE
T ss_conf 54889858999999999999979987---7-63588999898999723
No 16
>d1mjul1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}
Probab=48.60 E-value=8.5 Score=17.94 Aligned_cols=37 Identities=16% Similarity=0.378 Sum_probs=22.8
Q ss_pred CCCCCEEEEEEEEEECCCCCCCEEEE-EEEEECCCEEE
Q ss_conf 04897379998871078604756899-88866896798
Q T0552 24 LKVGETAEIRCQLHRDGRFEETKYFI-RYFQPDGAGTL 60 (122)
Q Consensus 24 I~~GetvEIRc~L~reG~y~~t~Y~I-RYFQ~dG~G~L 60 (122)
+..|++|.|+|.....-......+.| =|=|..|++--
T Consensus 13 v~~G~svtL~C~~s~~~~~~~~~~~i~WYrq~~g~~~~ 50 (112)
T d1mjul1 13 VTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQ 50 (112)
T ss_dssp ECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCE
T ss_pred ECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEE
T ss_conf 89899999999989987548898455878988998679
No 17
>d1yjdc1 b.1.1.1 (C:1-118) CD28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.54 E-value=11 Score=17.20 Aligned_cols=45 Identities=9% Similarity=0.245 Sum_probs=30.6
Q ss_pred CCCEEEECCCCEEEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEE
Q ss_conf 730003316853687323312048973799988710786047568998886689679
Q T0552 3 DDVDIQQSYPFSIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGT 59 (122)
Q Consensus 3 d~LDvqQ~YpF~v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~ 59 (122)
|++-|+|. | + -++.|++|.|.|.... .-...-|.+.|+|.-|++.
T Consensus 1 ~~i~V~Q~-p-------~--~v~~g~svtL~C~~s~--~~~~~~~~~w~~q~~~~~~ 45 (118)
T d1yjdc1 1 NKILVKQS-P-------M--LVAYDNAVNLSCKYSY--NLFSREFRASLHKGLDSAV 45 (118)
T ss_dssp CCBCEECC-S-------E--EECBTTBEEEEEEESC--CSSCSEEEEEEEESTTCCC
T ss_pred CEEEEECC-C-------C--EEECCCCEEEEEEEEC--CCCCCCEEEEEEECCCCCC
T ss_conf 91799969-8-------1--8928997899999946--7777637999998799953
No 18
>d1ai1h1 b.1.1.1 (H:1-112) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 7.3 [TaxId: 10090]}
Probab=46.44 E-value=11 Score=17.19 Aligned_cols=40 Identities=20% Similarity=0.339 Sum_probs=27.5
Q ss_pred HHCCCCCEEEEEEEEEECCCCCCCEEEEEEE-EECCCEEEEE
Q ss_conf 1204897379998871078604756899888-6689679885
Q T0552 22 KKLKVGETAEIRCQLHRDGRFEETKYFIRYF-QPDGAGTLKM 62 (122)
Q Consensus 22 k~I~~GetvEIRc~L~reG~y~~t~Y~IRYF-Q~dG~G~L~~ 62 (122)
.-+++|+++-|-|+.- ...+...-|.|.++ |+-|||--++
T Consensus 10 ~~vkPg~sl~LsC~~S-G~s~~~s~y~~~W~RQ~PGkglEwl 50 (120)
T d1ai1h1 10 AVIKPSQSLSLTCIVS-GFSITRTNYCWHWIRQAPGKGLEWM 50 (120)
T ss_dssp SEECSSSCEEEEEEEE-SSCTTSTTEEEEEEEECTTSCEEEE
T ss_pred CEECCCCCEEEEEEEC-CCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 1688999979789874-5165167652674428886551234
No 19
>d1akjd_ b.1.1.1 (D:) CD8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.84 E-value=12 Score=17.04 Aligned_cols=41 Identities=29% Similarity=0.533 Sum_probs=28.2
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCE
Q ss_conf 68732331204897379998871078604756899888668967
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAG 58 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G 58 (122)
+.-=|.......|++|.|.|++..... . .|.--|-|..|+|
T Consensus 3 ~~~sP~~~t~~~G~~vtL~C~~~~~~~-~--~~i~WyrQ~~g~~ 43 (114)
T d1akjd_ 3 FRVSPLDRTWNLGETVELKCQVLLSNP-T--SGCSWLFQPRGAA 43 (114)
T ss_dssp EEEECCSCCCCTTCCEEEEEEECCSSC-C--SCEEEEEECSSTT
T ss_pred EEECCCCEECCCCCCEEEEEEECCCCC-C--CCEEEEEECCCCC
T ss_conf 018897693169996999997379837-7--8789999888897
No 20
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1 (ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.53 E-value=12 Score=17.01 Aligned_cols=81 Identities=16% Similarity=0.179 Sum_probs=46.5
Q ss_pred CCCEEEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCEECCCCCCCCCCCEEEEEECCCCC
Q ss_conf 68536873233120489737999887107860475689988866896798858984662555651788718999803688
Q T0552 11 YPFSIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKMSDGTVLLPNDLYPLPGETFRLYYTSAST 90 (122)
Q Consensus 11 YpF~v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~~dg~~l~pnD~ypL~~e~FrLYYtS~s~ 90 (122)
+|=.|+.+|.+..+..|+.+++.|... |-+-.+.-+|.++ .|...|... ...-....-.|..++...
T Consensus 3 ~P~~v~i~p~~~~v~~G~~~~L~C~v~--g~~P~p~~~v~W~--~~~~~l~~~---------~~~~~~~~s~l~i~~~~~ 69 (103)
T d1iama1 3 TPERVELAPLPSWQPVGKQLTLRCQVE--GGAPRAQLTVVLL--RGEKELKRE---------PAVGEPAEVTTTVLVRRD 69 (103)
T ss_dssp CCSEEEECCCCSEECTTSEEEEEEEEE--CCBCGGGEEEEEE--ETTEEEEEE---------ECCTTTEEEEEEEECCSS
T ss_pred CCCCEEEECCCCEEECCCEEEEEEEEC--CCCCCCCEEEEEC--CCCCCCCCC---------CCCCCCCEEEEEEEEEHH
T ss_conf 899369837996693999799999963--8899875078973--554301013---------320245058999963216
Q ss_pred -CCCEEEEEEEECCC
Q ss_conf -77427999982888
Q T0552 91 -DQQTVDVYFQDSFG 104 (122)
Q Consensus 91 -~~q~idv~veDnfg 104 (122)
+...+.--.+...|
T Consensus 70 dd~g~ytC~A~n~~g 84 (103)
T d1iama1 70 HHGAQFSCRTELDLR 84 (103)
T ss_dssp CSSCEEEEEEEEECG
T ss_pred HCCCEEEEEEEECCC
T ss_conf 789799999995888
No 21
>d1j8hd1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}
Probab=44.19 E-value=12 Score=16.98 Aligned_cols=42 Identities=17% Similarity=0.311 Sum_probs=28.2
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEE
Q ss_conf 6873233120489737999887107860475689988866896798
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTL 60 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L 60 (122)
|.-.|-.-....|++|.|.|...-.+ ..|..-|=|..|+|--
T Consensus 3 vtQ~p~~v~~~~G~~vtl~C~~s~~~----~~~i~WYrQ~pg~~~~ 44 (115)
T d1j8hd1 3 VTQLGSHVSVSEGALVLLRCNYSSSV----PPYLFWYVQYPNQGLQ 44 (115)
T ss_dssp EECSCSEEEEETTSCEEECCEEECSS----CCEEEEEEECTTSCCE
T ss_pred EECCCCEEEECCCCCEEEEEEECCCC----CEEEEEEECCCCCCCE
T ss_conf 78379959990999899999968887----6208999726898603
No 22
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.98 E-value=12 Score=17.05 Aligned_cols=77 Identities=19% Similarity=0.247 Sum_probs=42.8
Q ss_pred CEEEEEECCHHCC-CCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCEECCCCCCCCCCCEEEEEECCCCC-
Q ss_conf 5368732331204-89737999887107860475689988866896798858984662555651788718999803688-
Q T0552 13 FSIETMPVPKKLK-VGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKMSDGTVLLPNDLYPLPGETFRLYYTSAST- 90 (122)
Q Consensus 13 F~v~tmPv~k~I~-~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~~dg~~l~pnD~ypL~~e~FrLYYtS~s~- 90 (122)
|.|+..|-++.++ .|+++.+.|... |.= .-.|.|+..++.- ++...+-. ...-.|.-++.+.
T Consensus 1 f~i~i~P~~~~~~~~G~~v~l~C~~~--g~p---~p~i~W~~~~~~~----------~~~~~~~~-~~~~~L~I~~v~~~ 64 (90)
T d1vcaa2 1 FKIETTPESRYLAQIGDSVSLTCSTT--GCE---SPFFSWRTQIDSP----------LNGKVTNE-GTTSTLTMNPVSFG 64 (90)
T ss_dssp CEEEEESSSEEEEETTSCEEEEEEEE--SCS---SCEEEEEETTCCC----------CSSEEEEE-TTEEEEEESSCCGG
T ss_pred CEEEEECCCCEEEECCCEEEEEEECC--CCC---CCEEEEEECCCCC----------EEEEEEEE-CCCCEEEEECCCCC
T ss_conf 98999789819997899899987615--799---9558997247430----------01122430-68759988103444
Q ss_pred CCCEEEEEEEECCCC
Q ss_conf 774279999828886
Q T0552 91 DQQTVDVYFQDSFGQ 105 (122)
Q Consensus 91 ~~q~idv~veDnfgq 105 (122)
|.-...-.+....|.
T Consensus 65 d~G~Y~C~a~N~~g~ 79 (90)
T d1vcaa2 65 NEHSYLCTATCESRK 79 (90)
T ss_dssp GCSEEEEEEEETTEE
T ss_pred CCCEEEEEEEECCCE
T ss_conf 341379999969987
No 23
>d1lgva1 b.1.1.1 (A:1-112) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 4 [TaxId: 9606]}
Probab=38.60 E-value=15 Score=16.45 Aligned_cols=39 Identities=13% Similarity=0.133 Sum_probs=26.7
Q ss_pred HCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 2048973799988710786047568998886689679885
Q T0552 23 KLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 23 ~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
...+|++|.|.|...- +.+.+-.|..-|-|..|++-..+
T Consensus 11 ~~~~G~svtl~C~~~~-~~~~~~~~i~WYrQ~pg~~~~~l 49 (112)
T d1lgva1 11 SGSPGQSITVSCTGVS-SIVGSYNLVSWYQQHPGKAPKLL 49 (112)
T ss_dssp EECTTCCEEEEEECCC-CSSSCCCCEEEEEECTTSCCEEE
T ss_pred EECCCCCEEEEEEECC-CCCCCCCCCEEEEEEECCCCEEE
T ss_conf 9899998999898578-77799874402432415541035
No 24
>d1ncwl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}
Probab=37.98 E-value=15 Score=16.39 Aligned_cols=44 Identities=16% Similarity=0.317 Sum_probs=27.7
Q ss_pred ECCHHCCCCCEEEEEEEEEECCCCC-CCEEEEEEEEECCCEEEEE
Q ss_conf 2331204897379998871078604-7568998886689679885
Q T0552 19 PVPKKLKVGETAEIRCQLHRDGRFE-ETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 19 Pv~k~I~~GetvEIRc~L~reG~y~-~t~Y~IRYFQ~dG~G~L~~ 62 (122)
|---....|++|.|.|.....-.-. ..-|.--|=|..|++-..+
T Consensus 8 P~sls~~~G~svtl~C~~s~~~~~~~~~~~~~WYrQ~pg~~~~~l 52 (112)
T d1ncwl1 8 PKTISVTIGQPASISCKSSQRLLNSNGKTFLNWLLQRPGQSPKRL 52 (112)
T ss_dssp CSEEEEETTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEE
T ss_pred CCEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEE
T ss_conf 998989989999999998863346999744477785899842899
No 25
>d1ac6a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}
Probab=37.59 E-value=15 Score=16.35 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=27.9
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 687323312048973799988710786047568998886689679885
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
|.--|-.-.+..|++|.|+|...-.+. -|..=|=|..|+|-..+
T Consensus 3 VtQ~p~~~~~~~G~~vtl~C~~~~~~~----~~~~WYrQ~pg~~p~~l 46 (110)
T d1ac6a_ 3 VTQTEGQVALSEEDFLTIHCNYSASGY----PALFWYVQYPGEGPQFL 46 (110)
T ss_dssp EEECCSEEEEETTEEEEECEEEECSSC----CEEEEEEECTTSCCEEE
T ss_pred EEECCCEEEECCCCCEEEEEEECCCCC----CCEEEEECCCCCCEEEE
T ss_conf 680898189899999999999638877----64599872899800974
No 26
>d1c5cl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}
Probab=36.68 E-value=16 Score=16.26 Aligned_cols=39 Identities=15% Similarity=0.315 Sum_probs=25.6
Q ss_pred ECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEE
Q ss_conf 2331204897379998871078604756899888668967988
Q T0552 19 PVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLK 61 (122)
Q Consensus 19 Pv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~ 61 (122)
|.--....|++|.|+|..... ...|..-|-|..|++...
T Consensus 8 P~s~~~~~G~svtl~C~~s~~----~~~~~~Wyrq~~g~~~~~ 46 (107)
T d1c5cl1 8 PSSLSASLGERVSLTCRTSQE----ISGYLSWLQQKPDGTIKR 46 (107)
T ss_dssp CSEEEECTTCCEEEEEEESSC----CTTCEEEEEECTTSCEEE
T ss_pred CCEEEECCCCCEEEEEEECCC----CCCCEEEEECCCCCCCEE
T ss_conf 997988999989999982999----989879999688975316
No 27
>d1tjgl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Engineered (including hybrid species)}
Probab=36.44 E-value=16 Score=16.24 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=24.7
Q ss_pred HHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 12048973799988710786047568998886689679885
Q T0552 22 KKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 22 k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
-.+..|++|.|+|..... .+. +.--|-|..|++-..+
T Consensus 11 l~~~~G~svtL~C~~s~~-~~~---~~~WYrq~~g~~~~~l 47 (107)
T d1tjgl1 11 LSASVGDRITITCRASQG-VTS---ALAWYRQKPGSPPQLL 47 (107)
T ss_dssp EEECTTCCEEEEEEESSC-CTT---CEEEEEECTTSCCEEE
T ss_pred EEECCCCCEEEEEEECCC-CCC---CEEEEECCCCCCCEEE
T ss_conf 997999979999997987-885---1898864489644378
No 28
>d1w72l1 b.1.1.1 (L:1-107) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 5 [TaxId: 9606]}
Probab=36.29 E-value=16 Score=16.23 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=24.2
Q ss_pred CCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 048973799988710786047568998886689679885
Q T0552 24 LKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 24 I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
...|++|.|+|...- . ..-|..=|-|..|++...+
T Consensus 12 ~~~G~svtl~C~~~~---~-~~~~i~WYrQ~~g~~~~~l 46 (109)
T d1w72l1 12 VAPGQTARITCGGNN---I-GSRSVHWYQQKPGQAPVLV 46 (109)
T ss_dssp ECTTSCEEEEEECTT---G-GGSCCEEEEECTTSCCEEE
T ss_pred ECCCCCEEEEEECCC---C-CCCCEEEEECCCCCEEEEE
T ss_conf 789997999998689---9-8762101311115236999
No 29
>d1qfoa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.18 E-value=16 Score=16.21 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=28.5
Q ss_pred ECCHHCCCCCEEEEEEEEEEC--CCCCCCEEEEEEEEECCCEEEEEC
Q ss_conf 233120489737999887107--860475689988866896798858
Q T0552 19 PVPKKLKVGETAEIRCQLHRD--GRFEETKYFIRYFQPDGAGTLKMS 63 (122)
Q Consensus 19 Pv~k~I~~GetvEIRc~L~re--G~y~~t~Y~IRYFQ~dG~G~L~~~ 63 (122)
|-.-....|++|.|.|...-. ..-....+-..|.+..+.+.+...
T Consensus 7 P~~v~~~~G~~V~l~C~f~~p~~~~~~~~~~~~w~~~~~~~~~~~~~ 53 (118)
T d1qfoa_ 7 PKNVQGLSGSCLLIPCIFSYPADVPVSNGITAIWYYDYSGKRQVVIH 53 (118)
T ss_dssp CSEEEEETTSCEEECCEEECCTTSCC--CCEEEEEESTTTTCEEEEE
T ss_pred CCEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEEEECEECCCEEEE
T ss_conf 88899936985999979962147887643799887522010000000
No 30
>d1jhll_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}
Probab=36.13 E-value=16 Score=16.21 Aligned_cols=41 Identities=22% Similarity=0.271 Sum_probs=26.5
Q ss_pred EECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 323312048973799988710786047568998886689679885
Q T0552 18 MPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 18 mPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
-|-.-....|++|.|+|...... ..|..=|-|..|++...+
T Consensus 7 ~P~~l~~~~G~svtL~C~~s~~~----~~~~~WYrq~~g~~~~~l 47 (108)
T d1jhll_ 7 SPSYLVASPGETITINCRASKSI----SKSLAWYQEKPGKTNNLL 47 (108)
T ss_dssp ECSEEEECTTSCEEEEEEESSCC----TTCEEEEEECTTSCCEEE
T ss_pred CCCEEEECCCCCEEEEEECCCCC----CCCEEEEECCCCCCCEEE
T ss_conf 39968966999899999815786----774499872225797289
No 31
>d1wc9a_ d.278.1.2 (A:) Trafficking protein particle complex subunit 3, Bet3 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.02 E-value=16 Score=16.20 Aligned_cols=30 Identities=27% Similarity=0.299 Sum_probs=25.4
Q ss_pred CCCCEEEEEECCHHCCCCCEEEEEEEEEEC
Q ss_conf 168536873233120489737999887107
Q T0552 10 SYPFSIETMPVPKKLKVGETAEIRCQLHRD 39 (122)
Q Consensus 10 ~YpF~v~tmPv~k~I~~GetvEIRc~L~re 39 (122)
+--|.+++..+...+..+++.|||..|.+.
T Consensus 130 ~~g~~~~V~~~~d~l~gd~~~~i~v~~~~~ 159 (161)
T d1wc9a_ 130 MVQMAVEAKFVQDTLKGDGVTEIRMRFIRR 159 (161)
T ss_dssp TTTEEEEEEEEECGGGTCSSEEEEEEEEEE
T ss_pred HCCCEEEEEEEECCCCCCCCEEEEEEEEEE
T ss_conf 789738999986356899826999998532
No 32
>d2bnqd1 b.1.1.1 (D:2-114) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}
Probab=35.91 E-value=16 Score=16.18 Aligned_cols=39 Identities=21% Similarity=0.501 Sum_probs=25.6
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEE-EEEECCCE
Q ss_conf 687323312048973799988710786047568998-88668967
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIR-YFQPDGAG 58 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IR-YFQ~dG~G 58 (122)
|.-.|-.-....|++|.|.|...... .|.|- |-|..|++
T Consensus 3 V~Q~P~~v~v~~G~sv~L~C~~s~~~-----~~~~~Wyrq~~g~~ 42 (113)
T d2bnqd1 3 VTQIPAALSVPEGENLVLNCSFTDSA-----IYNLQWFRQDPGKG 42 (113)
T ss_dssp EECSSSEEEEETTCCEEEEEEESCCC-----EEEEEEEEECTTSC
T ss_pred CEEECCEEEECCCCCEEEEEEEECCC-----CCCCEEEEECCCCC
T ss_conf 48539989993999999999974685-----24885897401466
No 33
>d1ogae1 b.1.1.1 (E:5-118) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}
Probab=34.74 E-value=17 Score=16.07 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=27.5
Q ss_pred EEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 87323312048973799988710786047568998886689679885
Q T0552 16 ETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 16 ~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
+=.|...-...|++|.|.|... .+ .-|..-|=|..|+|-..+
T Consensus 3 tQsP~~~~~~~G~svtl~C~~s-~~----~~~~~WYrQ~~g~~~~~l 44 (114)
T d1ogae1 3 TQSPKYLFRKEGQNVTLSCEQN-LN----HDAMYWYRQDPGQGLRLI 44 (114)
T ss_dssp ECSCSEEEEETTCCEEECCEEC-SC----CSEEEEEEECTTCCEEEE
T ss_pred EECCCEEEECCCCCEEEEEEEE-CC----CCCEEEEEECCCCCCCCE
T ss_conf 9869858973999999999983-38----882898861126687310
No 34
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]}
Probab=33.98 E-value=5.1 Score=19.29 Aligned_cols=15 Identities=13% Similarity=0.304 Sum_probs=9.3
Q ss_pred CHHCCCCCEEEEEEE
Q ss_conf 312048973799988
Q T0552 21 PKKLKVGETAEIRCQ 35 (122)
Q Consensus 21 ~k~I~~GetvEIRc~ 35 (122)
.=.+.+|++|+|+++
T Consensus 39 ~i~v~~Gd~V~~~~~ 53 (112)
T d1ibya_ 39 TLVVKKGDAVKVVVE 53 (112)
T ss_dssp EEEEETTCEEEEEEE
T ss_pred EEEEECCCEEEEEEE
T ss_conf 899909999999999
No 35
>d1i3ua_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh {Llama (Lama glama) [TaxId: 9844]}
Probab=33.85 E-value=18 Score=15.98 Aligned_cols=39 Identities=15% Similarity=0.409 Sum_probs=28.6
Q ss_pred CHHCCCCCEEEEEEEEEECCCCCCCEEEEE-EEEECCCEEEEE
Q ss_conf 312048973799988710786047568998-886689679885
Q T0552 21 PKKLKVGETAEIRCQLHRDGRFEETKYFIR-YFQPDGAGTLKM 62 (122)
Q Consensus 21 ~k~I~~GetvEIRc~L~reG~y~~t~Y~IR-YFQ~dG~G~L~~ 62 (122)
+.-+++||++-|.|+. ....+.+ |.|- |=|.-|||-..+
T Consensus 9 ~~lvkpg~sl~LsC~~-SG~~~s~--y~~~W~RQ~PGkglewl 48 (127)
T d1i3ua_ 9 GGLVQAGDSLKLSCEA-SGDSIGT--YVIGWFRQAPGKERIYL 48 (127)
T ss_dssp CEECCTTCCEEEEEEE-ESSCGGG--SEEEEEEECTTSCCEEE
T ss_pred CCEECCCCCEEEEEEE-CCCCCCC--CCEEEEEECCCCCEEEE
T ss_conf 8569999996998999-3898778--81585630786521578
No 36
>d1u9ka_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on myeloid cells 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.08 E-value=11 Score=17.27 Aligned_cols=36 Identities=25% Similarity=0.502 Sum_probs=22.3
Q ss_pred CHHCCCCCEEEEEEEEEECCCCCC-CEEEEEEEEECCCEE
Q ss_conf 312048973799988710786047-568998886689679
Q T0552 21 PKKLKVGETAEIRCQLHRDGRFEE-TKYFIRYFQPDGAGT 59 (122)
Q Consensus 21 ~k~I~~GetvEIRc~L~reG~y~~-t~Y~IRYFQ~dG~G~ 59 (122)
+..++.|++|-|.|.... ..|.. ..|-.| |..|++-
T Consensus 4 ~~~~~eG~svtl~C~ys~-~~~~~~~~~W~r--q~pg~~~ 40 (110)
T d1u9ka_ 4 RYDLVEGQTLTVKCPFNI-MKYANSQKAWQR--LPDGKEP 40 (110)
T ss_dssp EEEECTTCCEEEEEECCH-HHHTTSEEEEEE--CCTTSCC
T ss_pred CCCCCCCCCEEEEEEECC-CCCCCCCEEEEE--ECCCCCE
T ss_conf 770989998899999889-984289189999--7999977
No 37
>d2fx7l1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Human (Homo sapiens), cluster 3.2 [TaxId: 9606]}
Probab=32.57 E-value=19 Score=15.85 Aligned_cols=42 Identities=21% Similarity=0.336 Sum_probs=27.1
Q ss_pred EECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 323312048973799988710786047568998886689679885
Q T0552 18 MPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 18 mPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
.|..-.+.+|++|.|.|... +.. ...|..=|-|..|++-..+
T Consensus 7 ~P~~~~v~~G~tv~l~C~~~--~~~-~~~~~~WYrq~~g~~~~~l 48 (108)
T d2fx7l1 7 SPGTQSLSPGERATLSCRAS--QSV-GNNKLAWYQQRPGQAPRLL 48 (108)
T ss_dssp SSSEEEECTTCCEEEEEEES--SCC-GGGCEEEEEECTTSCCEEE
T ss_pred ECCEEEECCCCCEEEEEEEE--CCC-CCCCCEEEECCCCCCCEEE
T ss_conf 39929978999899999951--688-8761132723445797898
No 38
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.29 E-value=19 Score=15.82 Aligned_cols=87 Identities=14% Similarity=0.169 Sum_probs=50.2
Q ss_pred EEEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCEECC--CCCCCCCCCEEEEEECCCC-C
Q ss_conf 368732331204897379998871078604756899888668967988589846625--5565178871899980368-8
Q T0552 14 SIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKMSDGTVLLP--NDLYPLPGETFRLYYTSAS-T 90 (122)
Q Consensus 14 ~v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~~dg~~l~p--nD~ypL~~e~FrLYYtS~s-~ 90 (122)
+|.+=+-.-.+..|++|.+.|... |. . .-.|+|+..++........+..... .++.-+.+ ..|.-.+.+ .
T Consensus 3 sV~t~~~~v~v~~G~~v~l~C~~~--g~-p--~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~tL~I~~v~~~ 75 (102)
T d1f97a1 3 SVYTAQSDVQVPENESIKLTCTYS--GF-S--SPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS--SGITFSSVTRK 75 (102)
T ss_dssp EEECSCSEEEEETTCCEEEECEEE--SC-S--SEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET--TEEEESCCCGG
T ss_pred CEECCCCCEEEECCCEEEEEEECC--CC-C--CCEEEEEECCCCCEEEECCCCCCCCCEEEEEEECC--CEEEEEECCCC
T ss_conf 789669819995899899998727--89-8--97479995210101232036630122035898368--78999487702
Q ss_pred CCCEEEEEEEECCCCEE
Q ss_conf 77427999982888658
Q T0552 91 DQQTVDVYFQDSFGQLQ 107 (122)
Q Consensus 91 ~~q~idv~veDnfgq~~ 107 (122)
|.-.....+.+.+|...
T Consensus 76 D~G~Y~C~a~n~~g~~~ 92 (102)
T d1f97a1 76 DNGEYTCMVSEEGGQNY 92 (102)
T ss_dssp GCEEEEEEEEETTSSSE
T ss_pred CCEEEEEEEEECCCCEE
T ss_conf 78789999998999989
No 39
>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme) {Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}
Probab=32.09 E-value=19 Score=15.80 Aligned_cols=41 Identities=27% Similarity=0.451 Sum_probs=26.2
Q ss_pred EEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEE
Q ss_conf 7323312048973799988710786047568998886689679
Q T0552 17 TMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGT 59 (122)
Q Consensus 17 tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~ 59 (122)
=-|-.-....|++|.|.|++ .++.|... |..=|-|..|++-
T Consensus 4 Q~P~s~t~~~G~svtl~C~~-s~~s~~~~-~i~WYrq~~g~~~ 44 (112)
T d1sq2n_ 4 QTPRSVTKETGESLTINCVL-RDASYALG-STCWYRKKSGEGN 44 (112)
T ss_dssp EECSEEEECTTCCEEEEEEE-CSCSSCCC-CEEEEEEETTSCC
T ss_pred ECCCEEEECCCCCEEEEEEE-CCCCCCCC-CEEEEEEECCCEE
T ss_conf 45988897599989999998-88864699-2189886034111
No 40
>d2ntsp1 b.1.1.1 (P:3-118) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}
Probab=32.02 E-value=19 Score=15.80 Aligned_cols=40 Identities=20% Similarity=0.291 Sum_probs=24.9
Q ss_pred EEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEE-EEEECCCEEEEE
Q ss_conf 7323312048973799988710786047568998-886689679885
Q T0552 17 TMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIR-YFQPDGAGTLKM 62 (122)
Q Consensus 17 tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IR-YFQ~dG~G~L~~ 62 (122)
=.|--.-...|++|.|+|... .+ -+.|- |=|.-|++-..+
T Consensus 4 Q~P~~~~~~~G~svtl~C~~~-~~-----~~~~~WYrQ~pg~~~~~l 44 (113)
T d2ntsp1 4 QTPRYLIKTRGQQVTLSCSPI-SG-----HRSVSWYQQTPGQGLQFL 44 (113)
T ss_dssp EECSEEEEETTCCEEEEEECS-TT-----CCEEEEEEEETTTEEEEE
T ss_pred ECCCEEEECCCCCEEEEEEEC-CC-----CCEEEEEEEECCCCEEEE
T ss_conf 489838988999999999978-99-----988898895215110762
No 41
>d1914a1 d.49.1.1 (A:4004-4081) Signal recognition particle 9KDa protein, SRP9 {Mouse (Mus musculus) [TaxId: 10090]} SCOP: d1e8oa_ d1e8oc_
Probab=31.51 E-value=17 Score=16.07 Aligned_cols=27 Identities=26% Similarity=0.433 Sum_probs=23.6
Q ss_pred CCCEEEEEEEEECCCEEEEECCCCEEC
Q ss_conf 475689988866896798858984662
Q T0552 43 EETKYFIRYFQPDGAGTLKMSDGTVLL 69 (122)
Q Consensus 43 ~~t~Y~IRYFQ~dG~G~L~~~dg~~l~ 69 (122)
..|||.|.|--.+|+=+||+.|..+-+
T Consensus 20 ~ktRyv~Kyrh~~g~lvLKvTDn~~cl 46 (78)
T d1914a1 20 MKVRVVLKYRHVDGNLCIKVTDDLVCL 46 (78)
T ss_dssp TTCEEEEEEETTTTEEEEEEECSSSEE
T ss_pred CCEEEEEEEECCCCEEEEEEECCCEEE
T ss_conf 933688888769955999973594678
No 42
>d1uzva_ b.115.1.1 (A:) Fucose-binding lectin II (PA-LII) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.33 E-value=11 Score=17.30 Aligned_cols=24 Identities=25% Similarity=0.329 Sum_probs=15.1
Q ss_pred CCEEEEEECCCCCCCCEEEEEEEEC
Q ss_conf 8718999803688774279999828
Q T0552 78 GETFRLYYTSASTDQQTVDVYFQDS 102 (122)
Q Consensus 78 ~e~FrLYYtS~s~~~q~idv~veDn 102 (122)
.-.|++-.-.-|+.+|+|+||| |+
T Consensus 11 n~~Fgvta~~Nsa~~Qti~v~i-d~ 34 (114)
T d1uzva_ 11 NTRFGVTAFANSSGTQTVNVLV-NN 34 (114)
T ss_dssp TCEEEEEEEEEEEEEEEEEEEE-TT
T ss_pred CCEEEEEEEECCCCCEEEEEEE-CC
T ss_conf 7578599996046521799998-78
No 43
>d1k0ha_ b.106.1.2 (A:) Tail attachment protein gpF3 {Bacteriophage lambda [TaxId: 10710]}
Probab=30.43 E-value=9.4 Score=17.68 Aligned_cols=37 Identities=27% Similarity=0.522 Sum_probs=28.0
Q ss_pred CEEEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEE
Q ss_conf 536873233120489737999887107860475689988866896798
Q T0552 13 FSIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTL 60 (122)
Q Consensus 13 F~v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L 60 (122)
+.+.+==++ .++.|.++.| .+..|+++=.||||.|-.
T Consensus 65 L~vr~sD~~-~l~~gD~v~I----------~g~~Y~V~~v~pDg~G~t 101 (117)
T d1k0ha_ 65 LFVRTDEVR-QLRRGDTLTI----------GEENFWVDRVSPDDGGSC 101 (117)
T ss_dssp EEESSSSTT-TCCSSCEEEE----------TTTCEEBCCCCSSSCCCT
T ss_pred EEEECCCCC-CCCCCCEEEE----------CCEEEEEEEECCCCCCEE
T ss_conf 998944156-7677988999----------987899987633898469
No 44
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.35 E-value=20 Score=15.62 Aligned_cols=41 Identities=7% Similarity=0.099 Sum_probs=25.3
Q ss_pred ECCHHCCCCCEEEEEEEEEECC--CCCCCEEEE-EEEEECCCEE
Q ss_conf 2331204897379998871078--604756899-8886689679
Q T0552 19 PVPKKLKVGETAEIRCQLHRDG--RFEETKYFI-RYFQPDGAGT 59 (122)
Q Consensus 19 Pv~k~I~~GetvEIRc~L~reG--~y~~t~Y~I-RYFQ~dG~G~ 59 (122)
|-.=....|++|.|.|.+.-.+ .-.....++ -|.|..+++.
T Consensus 8 ~~svtv~~G~~V~ipC~~~~~~~~~~~~~~~~v~W~~~~~~~~~ 51 (121)
T d2g5ra1 8 QSSVTVQEGMCVHVRCSFSYPVDSQTDSDPVHGYWFRAGNDISW 51 (121)
T ss_dssp CSEEEECTTCCEEECCEEECC--CTTTTSCCEEEEEECC-----
T ss_pred CCEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCE
T ss_conf 89899955995999979907877885566589985676179843
No 45
>d1q9ra1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2 [TaxId: 10090]}
Probab=29.94 E-value=21 Score=15.58 Aligned_cols=44 Identities=18% Similarity=0.345 Sum_probs=26.1
Q ss_pred EECCHHCCCCCEEEEEEEEEEC--CCCCCCEEEEEEEEECCCEEEE
Q ss_conf 3233120489737999887107--8604756899888668967988
Q T0552 18 MPVPKKLKVGETAEIRCQLHRD--GRFEETKYFIRYFQPDGAGTLK 61 (122)
Q Consensus 18 mPv~k~I~~GetvEIRc~L~re--G~y~~t~Y~IRYFQ~dG~G~L~ 61 (122)
.|.-.....|++|.|+|...-. +.....-|.-=|-|..|++-..
T Consensus 7 ~P~~v~~~~G~svtL~C~~s~~~~~~~~~~~~~~WYrq~~g~~p~l 52 (113)
T d1q9ra1 7 SPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKL 52 (113)
T ss_dssp ECSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEE
T ss_pred CCCEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEE
T ss_conf 0998998999999999998888515887886359886479988899
No 46
>d8faba1 b.1.1.1 (A:3-105) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 5 [TaxId: 9606]}
Probab=28.81 E-value=20 Score=15.69 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=22.9
Q ss_pred CCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 048973799988710786047568998886689679885
Q T0552 24 LKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 24 I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
...|++|.|+|...-.+ ..|.-=|-|..|++-..+
T Consensus 10 ~~~G~svtl~C~~~~~~----~~~~~WYrQ~pg~~~~~~ 44 (103)
T d8faba1 10 VSPGQTARITCSANALP----NQYAYWYQQKPGRAPVMV 44 (103)
T ss_dssp ECTTSCEEEEEECTTGG----GSCCEEEEECTTSCCEEE
T ss_pred ECCCCCEEEEEEECCCC----CCCEEEEECCCCCCEEEE
T ss_conf 88999799999969988----999899980688850888
No 47
>d1h5ba_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}
Probab=28.76 E-value=22 Score=15.45 Aligned_cols=39 Identities=15% Similarity=0.341 Sum_probs=23.0
Q ss_pred ECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 23312048973799988710786047568998886689679885
Q T0552 19 PVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 19 Pv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
|-.-.+..|++|.|+|... .+. .|-.=|-|..|++-..+
T Consensus 8 P~~~~v~~G~~vtl~C~~~-~~~----~~~~WYrQ~~g~~~~~l 46 (113)
T d1h5ba_ 8 PSALSLHEGTDSALRCNFT-TTM----RSVQWFRQNSRGSLISL 46 (113)
T ss_dssp CSEEEEETTCCEEEEEEES-SCC----SEEEEEEECTTSCEEEE
T ss_pred CCEEEECCCCCEEEEEEEE-CCC----CCCEEEEEECCCCEEEE
T ss_conf 9999986999999999972-588----66518875123414887
No 48
>d1u3ha1 b.1.1.1 (A:2-116) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}
Probab=27.87 E-value=22 Score=15.36 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=23.1
Q ss_pred HCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEE
Q ss_conf 204897379998871078604756899888668967988
Q T0552 23 KLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLK 61 (122)
Q Consensus 23 ~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~ 61 (122)
.+..|++|.|+|.....+ ..|..-|-|..|++-..
T Consensus 10 ~~~~G~~vtl~C~~~~~~----~~~~~WYrq~pg~~~~~ 44 (110)
T d1u3ha1 10 TVWEGETAILNCSYENSA----FDYFPWYQQFPGEGPAL 44 (110)
T ss_dssp EEETTSCEEEEEEECCTT----EEEEEEEEECTTSCCEE
T ss_pred EECCCCCEEEEEEECCCC----CCEEEEEEECCCCCEEE
T ss_conf 981899999999964899----70789985113340143
No 49
>d1tola2 d.212.1.1 (A:125-216) TolA {Escherichia coli [TaxId: 562]}
Probab=27.59 E-value=22 Score=15.44 Aligned_cols=26 Identities=23% Similarity=0.368 Sum_probs=21.1
Q ss_pred EECCHHCCCCCEEEEEEEEEECCCCCC
Q ss_conf 323312048973799988710786047
Q T0552 18 MPVPKKLKVGETAEIRCQLHRDGRFEE 44 (122)
Q Consensus 18 mPv~k~I~~GetvEIRc~L~reG~y~~ 44 (122)
|..|-.+ +|.+++|+.+|.+.|.-.+
T Consensus 20 w~~p~~~-~g~~~~v~i~l~~~G~v~~ 45 (92)
T d1tola2 20 FYDASSY-AGKTCTLRIKLAPDGMLLD 45 (92)
T ss_dssp CTTGGGG-TTCCEEEEEEECTTSCEEE
T ss_pred CCCCCCC-CCCEEEEEEEEECCCCEEE
T ss_conf 4899656-8999999999967843898
No 50
>d2chha1 b.115.1.1 (A:1-113) Mannose-specific lectin RS-IIL {Ralstonia solanacearum [TaxId: 305]}
Probab=26.80 E-value=14 Score=16.52 Aligned_cols=24 Identities=17% Similarity=0.332 Sum_probs=14.8
Q ss_pred CCEEEEEECCCCCCCCEEEEEEEE
Q ss_conf 871899980368877427999982
Q T0552 78 GETFRLYYTSASTDQQTVDVYFQD 101 (122)
Q Consensus 78 ~e~FrLYYtS~s~~~q~idv~veD 101 (122)
.-.|.+---.-|+.+|+|+|||-|
T Consensus 11 n~~Fgvta~~Nsa~qQti~v~vDd 34 (113)
T d2chha1 11 NTSFGVTAFANAANTQTIQVLVDN 34 (113)
T ss_dssp TCEEEEEEEEEEEEEEEEEEEETT
T ss_pred CCEEEEEEEEECCCCEEEEEEECC
T ss_conf 758869999604652179999778
No 51
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]}
Probab=26.61 E-value=8.3 Score=18.01 Aligned_cols=13 Identities=8% Similarity=0.189 Sum_probs=5.7
Q ss_pred HCCCCCEEEEEEE
Q ss_conf 2048973799988
Q T0552 23 KLKVGETAEIRCQ 35 (122)
Q Consensus 23 ~I~~GetvEIRc~ 35 (122)
.|..|++|.++++
T Consensus 50 ~vp~G~~V~~~lt 62 (122)
T d2cuaa_ 50 EVPQGAEIVFKIT 62 (122)
T ss_dssp EEETTSEEEEEEE
T ss_pred EEECCCEEEEEEE
T ss_conf 9948999999999
No 52
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.05 E-value=24 Score=15.16 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=26.2
Q ss_pred CCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCE
Q ss_conf 04897379998871078604756899888668967988589846
Q T0552 24 LKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKMSDGTV 67 (122)
Q Consensus 24 I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~~dg~~ 67 (122)
...|+||++.|......+.......+-+....+.-.+...+|..
T Consensus 6 a~~G~tv~L~C~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 49 (110)
T d1ncna_ 6 AYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKE 49 (110)
T ss_dssp EETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEE
T ss_pred EEECCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCE
T ss_conf 99088299998970898777411379862256525799718860
No 53
>d1i8lc_ b.1.1.1 (C:) Immunoreceptor CTLA-4 (CD152), N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.01 E-value=24 Score=15.15 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=45.5
Q ss_pred CCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEE----E-CCCCEECCCCCC---CCCCCEEEEEECCCCCCCCEE
Q ss_conf 04897379998871078604756899888668967988----5-898466255565---178871899980368877427
Q T0552 24 LKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLK----M-SDGTVLLPNDLY---PLPGETFRLYYTSASTDQQTV 95 (122)
Q Consensus 24 I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~----~-~dg~~l~pnD~y---pL~~e~FrLYYtS~s~~~q~i 95 (122)
...|++|.+.|+....+...+. |---|-|..|++.-. + ....+-.-+++. -..+..+.|.-++....-..+
T Consensus 11 ~~~g~~vtL~C~~~~~~~~~~~-~v~WyrQ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Dsa~ 89 (118)
T d1i8lc_ 11 ASSRGIASFVCEYASPGKATEV-RVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLRAMDTGL 89 (118)
T ss_dssp CCSSSCEEEEEEECCCSCCSEE-EEEEEEESTTCCCEEEEEEEETTSCCCCCSSCSCCCCBCSSEEEEEECSCCGGGCEE
T ss_pred EECCCCEEEEEECCCCCCCCCE-EEEEEEECCCCEEEEEEEEECCCCEECCCCCCEEEECCCCCEEEEEEECCCCCCCEE
T ss_conf 9289839999976354563530-189999997993299999969997750258747847188899878951553479888
Q ss_pred EEE-EE--------ECCCCEEEEEE
Q ss_conf 999-98--------28886589998
Q T0552 96 DVY-FQ--------DSFGQLQQLTF 111 (122)
Q Consensus 96 dv~-ve--------Dnfgq~~ql~f 111 (122)
=+- ++ .-||+--+|+.
T Consensus 90 YyCa~~~~~~~~~~~~fG~GT~L~V 114 (118)
T d1i8lc_ 90 YICKVELMYPPPYYLGIGNGAQIYV 114 (118)
T ss_dssp EEEEEEEEESSSCEEEECCCEEEEC
T ss_pred EEEEEECCCCCCCEEEECCCEEEEE
T ss_conf 9986705669875269998999999
No 54
>d1fo0b_ b.1.1.1 (B:) T-cell antigen receptor {Mouse (Mus musculus), beta-chain [TaxId: 10090]}
Probab=25.99 E-value=24 Score=15.15 Aligned_cols=43 Identities=19% Similarity=0.290 Sum_probs=29.5
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEE
Q ss_conf 68732331204897379998871078604756899888668967988
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLK 61 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~ 61 (122)
|+-.|-..-...|++|.|+|...-.+ + -|.-=|=|..|+|--.
T Consensus 4 V~Q~P~~~~~~~G~~vtL~C~~~~~~-~---~~~~WYrQ~~g~~~~~ 46 (112)
T d1fo0b_ 4 LEQNPRWRLVPRGQAVNLRCILKNSQ-Y---PWMSWYQQDLQKQLQW 46 (112)
T ss_dssp EEEECSEEECCTTCCEEEEEEESCTT-C---CEEEEEEECTTCCEEE
T ss_pred EEECCCEEEECCCCCEEEEEEEECCC-C---CCEEEEEECCCCCCCC
T ss_conf 99589948988999899999973699-7---7289995999998641
No 55
>d1914a1 d.49.1.1 (A:4004-4081) Signal recognition particle 9KDa protein, SRP9 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.93 E-value=23 Score=15.32 Aligned_cols=27 Identities=26% Similarity=0.433 Sum_probs=23.6
Q ss_pred CCCEEEEEEEEECCCEEEEECCCCEEC
Q ss_conf 475689988866896798858984662
Q T0552 43 EETKYFIRYFQPDGAGTLKMSDGTVLL 69 (122)
Q Consensus 43 ~~t~Y~IRYFQ~dG~G~L~~~dg~~l~ 69 (122)
..|||.+.|--.+|+=.|+..|..+-+
T Consensus 20 ~ktRyv~Kyrh~~g~l~LKvTDd~~cl 46 (78)
T d1914a1 20 MKVRVVLKYRHVDGNLCIKVTDDLVCL 46 (78)
T ss_dssp TTCEEEEEEETTTTEEEEEEECSSSEE
T ss_pred CCEEEEEEEECCCCEEEEEEECCCEEE
T ss_conf 806899999738973999980695278
No 56
>d2rhea_ b.1.1.1 (A:) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 2 [TaxId: 9606]}
Probab=25.83 E-value=24 Score=15.13 Aligned_cols=38 Identities=18% Similarity=0.210 Sum_probs=24.3
Q ss_pred HCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 2048973799988710786047568998886689679885
Q T0552 23 KLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 23 ~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
...+|++|.|+|... ..++.. -|..=|-|..|++...+
T Consensus 11 ~v~~G~svtL~C~~s-~~~~~~-~~~~WYrQ~~g~~~~~l 48 (114)
T d2rhea_ 11 SGTPGQRVTISCTGS-ATDIGS-NSVIWYQQVPGKAPKLL 48 (114)
T ss_dssp EECTTCCEEEEEECC-TTTTTT-SCEEEEECCTTSCCEEE
T ss_pred EECCCCCEEEEEEEC-CCCCCC-CCCCCEEEECCCCEEEE
T ss_conf 768999799999987-726538-84221011013440789
No 57
>d2aq2a1 b.1.1.1 (A:1-117) T-cell antigen receptor {Mouse (Mus musculus), beta-chain [TaxId: 10090]}
Probab=25.76 E-value=24 Score=15.12 Aligned_cols=43 Identities=23% Similarity=0.353 Sum_probs=27.7
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 687323312048973799988710786047568998886689679885
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
|.=.|.-.-...|++|.|+|+.. +.+ -|--=|-|..|++-..+
T Consensus 4 V~Q~P~~~~~~~G~~vtl~C~~s--~~~---~~~~WYrQ~~g~~p~~l 46 (110)
T d2aq2a1 4 VTQSPRNKVAVTGEKVTLSCQQT--NNH---NNMYWYRQDTGHGLRLI 46 (110)
T ss_dssp EEEECSEEEECTTCCEEEEEEES--SCC---SEEEEEEECTTSCEEEE
T ss_pred EEEECCEEEECCCCCEEEEEEEC--CCC---CCEEEEEECCCCCCEEE
T ss_conf 89719858975999999999989--984---86798998456785499
No 58
>d2ak4d1 b.1.1.1 (D:1-116) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}
Probab=25.61 E-value=25 Score=15.11 Aligned_cols=40 Identities=15% Similarity=0.311 Sum_probs=24.5
Q ss_pred ECCHHCCCCCEEEEEEEEEECCCCCCCEEEEE-EEEECCCEEEEE
Q ss_conf 23312048973799988710786047568998-886689679885
Q T0552 19 PVPKKLKVGETAEIRCQLHRDGRFEETKYFIR-YFQPDGAGTLKM 62 (122)
Q Consensus 19 Pv~k~I~~GetvEIRc~L~reG~y~~t~Y~IR-YFQ~dG~G~L~~ 62 (122)
|-.-.+..|++|.|.|....... .+.|. |-|..|++-..+
T Consensus 7 ~~~v~v~~G~~VtL~C~~~~~~~----~~~~~Wyrq~~g~~~~~l 47 (114)
T d2ak4d1 7 QTEISVVEKEDVTLDCVYETRDT----TYYLFWYKQPPSGELVFL 47 (114)
T ss_dssp CCEEEEETTCCEEECCEEECSCS----SCEEEEEEECTTCCCEEE
T ss_pred CCEEEEECCCCEEEEEEECCCCC----CCCEEEEECCCCCCCEEE
T ss_conf 99699919999999999748975----864899992556762476
No 59
>d1lr0a_ d.212.1.1 (A:) TolA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.45 E-value=23 Score=15.24 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=23.0
Q ss_pred EEECCHHCCCCCEEEEEEEEEECCCCCCC
Q ss_conf 73233120489737999887107860475
Q T0552 17 TMPVPKKLKVGETAEIRCQLHRDGRFEET 45 (122)
Q Consensus 17 tmPv~k~I~~GetvEIRc~L~reG~y~~t 45 (122)
.|-.|..+..|-+|.|+++|.+.|.-.+.
T Consensus 39 ~W~~P~~~~~~~~v~v~~~i~~dG~v~~~ 67 (126)
T d1lr0a_ 39 QWRRPPSARNGMSVEVLIEMLPDGTITNA 67 (126)
T ss_dssp HCCCCTTCCTTCCEEEEEEECTTSBEEEE
T ss_pred HCCCCCCCCCCCEEEEEEEEECCCCEEEE
T ss_conf 56899777889789999999189989530
No 60
>d1ymmd1 b.1.1.1 (D:9-104) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}
Probab=25.30 E-value=14 Score=16.53 Aligned_cols=31 Identities=23% Similarity=0.494 Sum_probs=20.7
Q ss_pred CCCCCEEEEEEEEEECCCCCCCEEEEEE-EEECCCEEE
Q ss_conf 0489737999887107860475689988-866896798
Q T0552 24 LKVGETAEIRCQLHRDGRFEETKYFIRY-FQPDGAGTL 60 (122)
Q Consensus 24 I~~GetvEIRc~L~reG~y~~t~Y~IRY-FQ~dG~G~L 60 (122)
+..|++|.|.|... ...+.|-+ -|..|+|-.
T Consensus 5 V~eG~~vtL~C~~~------~~~~~i~WYrQ~~g~~~~ 36 (96)
T d1ymmd1 5 IQEGENATMNCSYK------TSINNLQWYRQNSGRGLV 36 (96)
T ss_dssp CSSCCCCCBCCBCS------SCEEEEEEECCCSSCCCC
T ss_pred ECCCCCEEEEEEEE------CCCCCEEEEEECCCCCCC
T ss_conf 89999899999971------786338999978887762
No 61
>d1tvda_ b.1.1.1 (A:) T-cell antigen receptor {Human (Homo sapiens), delta-chain [TaxId: 9606]}
Probab=25.20 E-value=25 Score=15.06 Aligned_cols=69 Identities=9% Similarity=0.116 Sum_probs=35.9
Q ss_pred EECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE---CCCCEE---CCCCCCCC----CCCEEEEEECC
Q ss_conf 323312048973799988710786047568998886689679885---898466---25556517----88718999803
Q T0552 18 MPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM---SDGTVL---LPNDLYPL----PGETFRLYYTS 87 (122)
Q Consensus 18 mPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~---~dg~~l---~pnD~ypL----~~e~FrLYYtS 87 (122)
-|--..+..|++|.|.|+..... . ..+..=|-|..|++--.+ ..+..- ...+|+-. .+..|.|--.+
T Consensus 6 ~p~~~~~~~G~~vtL~C~~~~~~--~-~~~i~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~rf~~~~~~~~~~~~L~I~~ 82 (116)
T d1tvda_ 6 SSPDQTVASGSEVVLLCTYDTVY--S-NPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISP 82 (116)
T ss_dssp CSCCEEEETTCCEEECCEEECCS--S-SCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESS
T ss_pred CCCCEEECCCCCEEEEEEECCCC--C-CCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEEECC
T ss_conf 69977996999999999974871--3-88589999479996197562134532006762117899833740678642047
Q ss_pred CC
Q ss_conf 68
Q T0552 88 AS 89 (122)
Q Consensus 88 ~s 89 (122)
+.
T Consensus 83 ~~ 84 (116)
T d1tvda_ 83 VR 84 (116)
T ss_dssp CC
T ss_pred CC
T ss_conf 66
No 62
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car), domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.90 E-value=25 Score=15.03 Aligned_cols=82 Identities=15% Similarity=0.175 Sum_probs=40.7
Q ss_pred HHCCCCCEEEEEEEEEECCCCCCCEEEEEEE-EECCCEE-----EEECCCCEECCC-----CCCCC-----CCCEEEEEE
Q ss_conf 1204897379998871078604756899888-6689679-----885898466255-----56517-----887189998
Q T0552 22 KKLKVGETAEIRCQLHRDGRFEETKYFIRYF-QPDGAGT-----LKMSDGTVLLPN-----DLYPL-----PGETFRLYY 85 (122)
Q Consensus 22 k~I~~GetvEIRc~L~reG~y~~t~Y~IRYF-Q~dG~G~-----L~~~dg~~l~pn-----D~ypL-----~~e~FrLYY 85 (122)
-....|++|.+.|....... ....+.|.++ ++.+... +....+...... +|..+ ....|.|--
T Consensus 14 v~~~~G~~v~L~C~~~~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I 92 (124)
T d1eaja_ 14 IEKAKGETAYLPCKFTLSPE-DQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINV 92 (124)
T ss_dssp EEEETTSCEEECCBEECCTT-CCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEE
T ss_pred EEEECCCCEEEEEEEECCCC-CCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEE
T ss_conf 99978986999599962357-99818999999599986214899997087310354844356057772478789999999
Q ss_pred CCCC-CCCCEEEEEEEECCC
Q ss_conf 0368-877427999982888
Q T0552 86 TSAS-TDQQTVDVYFQDSFG 104 (122)
Q Consensus 86 tS~s-~~~q~idv~veDnfg 104 (122)
.+.. .|+-...-.|.+..|
T Consensus 93 ~~v~~~D~G~Y~C~v~~~~~ 112 (124)
T d1eaja_ 93 TNLQLSDIGTYQCKVKKAPG 112 (124)
T ss_dssp CSCCGGGCEEEEEEEEETTE
T ss_pred CCCEECCCEEEEEEEEECCC
T ss_conf 32397659999999998998
No 63
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.89 E-value=20 Score=15.68 Aligned_cols=47 Identities=19% Similarity=0.185 Sum_probs=31.9
Q ss_pred CEEEEECCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCC
Q ss_conf 6798858984662555651788718999803688774279999828886
Q T0552 57 AGTLKMSDGTVLLPNDLYPLPGETFRLYYTSASTDQQTVDVYFQDSFGQ 105 (122)
Q Consensus 57 ~G~L~~~dg~~l~pnD~ypL~~e~FrLYYtS~s~~~q~idv~veDnfgq 105 (122)
.|+. -||..+.|+..+||..+.-=-.-.+...+..++.+++.|+|-+
T Consensus 79 NGT~--vNg~~l~~~~~~~L~~GD~I~iG~~~~~~~v~~~~~~~~~f~~ 125 (127)
T d1g6ga_ 79 NGTW--LNGQKVEKNSNQLLSQGDEITVGVGVESDILSLVIFINDKFKQ 125 (127)
T ss_dssp SCCE--ETTEECCTTCCEECCTTCEEEECTTSGGGCEEEEEEECHHHHH
T ss_pred CEEE--ECCEEECCCCEEECCCCCEEEECCCCCCCEEEEEEEECCHHHH
T ss_conf 6047--9988945998789389999997988877669999998676752
No 64
>d1n0xh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}
Probab=24.84 E-value=25 Score=15.02 Aligned_cols=41 Identities=24% Similarity=0.399 Sum_probs=27.9
Q ss_pred ECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEE-EECCCEEEEE
Q ss_conf 2331204897379998871078604756899888-6689679885
Q T0552 19 PVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYF-QPDGAGTLKM 62 (122)
Q Consensus 19 Pv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYF-Q~dG~G~L~~ 62 (122)
+-+.-+++||++-|-|+.- ...| +.|.|.++ |+-|||-.+|
T Consensus 7 sg~~~~kpg~sl~lsC~~S-G~~~--~~y~~~WvRQ~PGkglew~ 48 (127)
T d1n0xh1 7 SGAEVKKPGASVKVSCQAS-GYRF--SNFVIHWVRQAPGQRFEWM 48 (127)
T ss_dssp CCCEEECTTCCEEEEEEEE-SSCG--GGSCEEEEEECTTSCCEEE
T ss_pred ECCCEECCCCCEEEEEEEC-CCCC--CCCCEEEEEECCCCCCEEE
T ss_conf 8984599999979999994-7887--7898788886798750553
No 65
>d1nfde1 b.1.1.1 (E:2-107) Immunoglobulin light chain lambda variable domain, VL-lambda {Hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=24.58 E-value=25 Score=15.10 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=21.8
Q ss_pred CCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 48973799988710786047568998886689679885
Q T0552 25 KVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 25 ~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
..|++|.|.|...... . -|.-=|-|..|++-..+
T Consensus 12 ~~G~svtl~C~~~~~~---~-~~i~WYrQ~~g~~p~~l 45 (108)
T d1nfde1 12 TVGETVKITCSGDQLP---K-NFAYWFQQKSDKNILLL 45 (108)
T ss_dssp ETTSCCCEEEEETTGG---G-SCCEEEEECTTCCEEEE
T ss_pred CCCCCEEEEEECCCCC---C-CCEEEEECCCCCCEEEE
T ss_conf 9999899999878898---8-63898820422320100
No 66
>d1bwwa_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable domain, VL-kappa {Human (Homo sapiens), cluster 1 [TaxId: 9606]}
Probab=23.34 E-value=27 Score=14.84 Aligned_cols=40 Identities=30% Similarity=0.470 Sum_probs=26.2
Q ss_pred ECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 23312048973799988710786047568998886689679885
Q T0552 19 PVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 19 Pv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
|-.-....|++|.|+|...-.. + .|.--|-|..|++-..+
T Consensus 10 P~~l~~~~G~svtL~C~~s~~~-~---~~~~WYrq~~g~~p~~l 49 (109)
T d1bwwa_ 10 PSSLSASVGDRVTITCQASQDI-I---KYLNWYQQKPGKAPKLL 49 (109)
T ss_dssp CSEEEECTTCCEEEEEEESSCC-T---TCEEEEEECTTSCCEEE
T ss_pred CCEEEECCCCCEEEEEEECCCC-C---CCCEEEEECCCCCCEEE
T ss_conf 9989989999999999962898-8---74068543169998999
No 67
>d1txka1 b.1.18.2 (A:397-511) Glucans biosynthesis protein G (MdoG, OpgG), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.33 E-value=26 Score=14.97 Aligned_cols=11 Identities=27% Similarity=0.419 Sum_probs=3.8
Q ss_pred EEEEEEEEECC
Q ss_conf 79998871078
Q T0552 30 AEIRCQLHRDG 40 (122)
Q Consensus 30 vEIRc~L~reG 40 (122)
||+||.|...|
T Consensus 90 vELR~~L~~~~ 100 (115)
T d1txka1 90 TEMRAALVNAD 100 (115)
T ss_dssp EEEEEEEECSS
T ss_pred EEEEEEEECCC
T ss_conf 79999960599
No 68
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.85 E-value=28 Score=14.78 Aligned_cols=89 Identities=10% Similarity=0.136 Sum_probs=53.1
Q ss_pred CCEEEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCEE--CCCCCCCCCCCEEEEEECCCC
Q ss_conf 853687323312048973799988710786047568998886689679885898466--255565178871899980368
Q T0552 12 PFSIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKMSDGTVL--LPNDLYPLPGETFRLYYTSAS 89 (122)
Q Consensus 12 pF~v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~~dg~~l--~pnD~ypL~~e~FrLYYtS~s 89 (122)
+.+|++.+-.-.+..|++|.++|... |. ..-.|.|+..++............ -+.++.-+... .|.-.+.+
T Consensus 4 ~v~V~~~~~~v~v~~g~~v~L~C~~~--g~---p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~I~~v~ 76 (105)
T d1nbqa1 4 SVTVHSSEPEVRIPENNPVKLSCAYS--GF---SSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPT--GITFKSVT 76 (105)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEE--SC---SSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETT--EEECSCCC
T ss_pred CEEEECCCCEEEEECCCEEEEEEEEC--CC---CCCEEEEEEEEECEEEEEECCCEEECCCCCEEEECCC--EEEEECCC
T ss_conf 53998889839993899299999958--87---7870688763100001110142121045651660375--09996460
Q ss_pred -CCCCEEEEEEEECCCCEE
Q ss_conf -877427999982888658
Q T0552 90 -TDQQTVDVYFQDSFGQLQ 107 (122)
Q Consensus 90 -~~~q~idv~veDnfgq~~ 107 (122)
.|+-.....+...+|...
T Consensus 77 ~~D~G~Y~C~a~n~~G~~~ 95 (105)
T d1nbqa1 77 REDTGTYTCMVSEEGGNSY 95 (105)
T ss_dssp TTSCSEEEEEEEETTSSCE
T ss_pred CCCEEEEEEEEEECCCCEE
T ss_conf 4620669999998998799
No 69
>d2bnub1 b.1.1.1 (B:2-113) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}
Probab=22.84 E-value=28 Score=14.78 Aligned_cols=43 Identities=23% Similarity=0.434 Sum_probs=26.8
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 687323312048973799988710786047568998886689679885
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
|+=.|--.-+..|++|.|+|+... + ..|--=|=|..|++-..+
T Consensus 2 VtQ~P~~~~~~~G~svtl~C~~s~-~----~~~~~WYrQ~~g~~p~~l 44 (112)
T d2bnub1 2 VTQTPKFQVLKTGQSMTLQCAQDM-N----HEYMSWYRQDPGMGLRLI 44 (112)
T ss_dssp EEEECSEEEEETTCCEEEEEEESS-C----CSEEEEEEEETTTEEEEE
T ss_pred EEECCCEEEECCCCCEEEEEEEEC-C----CCCEEECCCCCCCCCCCE
T ss_conf 388899289789998999999878-7----062584211244476621
No 70
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.70 E-value=25 Score=15.08 Aligned_cols=40 Identities=15% Similarity=0.285 Sum_probs=24.0
Q ss_pred CCEEEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEC
Q ss_conf 85368732331204897379998871078604756899888668
Q T0552 12 PFSIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPD 55 (122)
Q Consensus 12 pF~v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~d 55 (122)
|+.++.-+-.-.+..|+++.+.|.. ..|.= .-++.|.-.+
T Consensus 3 P~~i~~p~~~~~~~~G~~~~l~C~~-~~g~p---~p~v~W~~~~ 42 (90)
T d1gsma1 3 PLQVEPPEPVVAVALGASRQLTCRL-ACADR---GASVQWRGLD 42 (90)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEE-CCSST---TCEEEEESST
T ss_pred CCEEECCCCEEEEEECCCEEEEEEE-CCCCC---CCEEEEEEEE
T ss_conf 9478189982999857869999974-68999---6289999730
No 71
>d1d3ii_ i.6.1.1 (I:) HRV14 complexed with d1d2-ICAM-1 {Human rhinovirus 14 [TaxId: 12131]}
Probab=22.48 E-value=28 Score=14.74 Aligned_cols=36 Identities=25% Similarity=0.518 Sum_probs=17.8
Q ss_pred EEEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEE
Q ss_conf 68732331204897379998871078604756899888
Q T0552 15 IETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYF 52 (122)
Q Consensus 15 v~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYF 52 (122)
++..|.+-.+..|++++++|... |.+-.+..+|.++
T Consensus 89 ~~i~~~~~~v~~G~~~~l~C~v~--~~~P~~~~~i~W~ 124 (185)
T d1d3ii_ 89 VELAPLPSWQPVGKNLTLRCQVE--GGAPRANLTVVLL 124 (185)
T ss_pred CCCCCCCCEEECCCEEEEEEEEC--CCCCCCCCEEEEE
T ss_conf 01357873672396599999867--8998200117771
No 72
>d2fx7h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}
Probab=22.41 E-value=28 Score=14.73 Aligned_cols=38 Identities=24% Similarity=0.517 Sum_probs=25.9
Q ss_pred HHCCCCCEEEEEEEEEECCCCCCCEEEEEEE-EECCCEEEEE
Q ss_conf 1204897379998871078604756899888-6689679885
Q T0552 22 KKLKVGETAEIRCQLHRDGRFEETKYFIRYF-QPDGAGTLKM 62 (122)
Q Consensus 22 k~I~~GetvEIRc~L~reG~y~~t~Y~IRYF-Q~dG~G~L~~ 62 (122)
.-.++||++-|-|+. ..-.|. .|.|.++ |+-|||--+|
T Consensus 10 ~~~kPg~sl~LsC~~-SG~s~~--~y~~~WvRQ~PGkglew~ 48 (127)
T d2fx7h1 10 EVKRPGSSVTVSCKA-SGGSFS--TYALSWVRQAPGRGLEWM 48 (127)
T ss_dssp EEECTTCCEEEEEEE-ESSCST--TSCEEEEEECTTCCEEEE
T ss_pred CEECCCCCEEEEEEE-CCCCCC--CCCEEEEEECCCCCCEEE
T ss_conf 269899987999999-389977--787688885899760342
No 73
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.41 E-value=28 Score=14.73 Aligned_cols=85 Identities=21% Similarity=0.390 Sum_probs=40.4
Q ss_pred EEEECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCE--ECCCCCCCCCCCEEEEEECCCC-CCC
Q ss_conf 8732331204897379998871078604756899888668967988589846--6255565178871899980368-877
Q T0552 16 ETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKMSDGTV--LLPNDLYPLPGETFRLYYTSAS-TDQ 92 (122)
Q Consensus 16 ~tmPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~~dg~~--l~pnD~ypL~~e~FrLYYtS~s-~~~ 92 (122)
....+|+.+..|++|.+.|... +|+- .-.|+|+. +|. .+...++.. ...+..+-.......|.-.+.. .|+
T Consensus 6 p~~~~~~~v~~G~~v~L~C~~~-~g~p---~~~v~W~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~ 79 (110)
T d1f97a2 6 PTISVPSSVTIGNRAVLTCSEH-DGSP---PSEYSWFK-DGI-SMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDS 79 (110)
T ss_dssp CEEECCSEEETTSCEEEEEECS-CCBS---CCEEEEEE-TTE-ESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGC
T ss_pred CEECCCCEEECCCEEEEEEEEE-CCCC---CCEEEEEE-CCE-EECCCCCEEEEEECCCEEEEEECCCCEEECCCCCCCC
T ss_conf 1127887895398299999966-6888---98899986-991-8057774257750574289861125359887890479
Q ss_pred CEEEEEEEECCCCE
Q ss_conf 42799998288865
Q T0552 93 QTVDVYFQDSFGQL 106 (122)
Q Consensus 93 q~idv~veDnfgq~ 106 (122)
-...-.+...+|..
T Consensus 80 G~Y~C~a~N~~G~~ 93 (110)
T d1f97a2 80 GEYYCQAQNGYGTA 93 (110)
T ss_dssp EEEEEEEECSSSCC
T ss_pred EEEEEEEEECCCCE
T ss_conf 99999999799867
No 74
>d2ck0h1 b.1.1.1 (H:1-106) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 1 [TaxId: 10090]}
Probab=20.96 E-value=30 Score=14.54 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=25.6
Q ss_pred CHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 312048973799988710786047568998886689679885
Q T0552 21 PKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLKM 62 (122)
Q Consensus 21 ~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~~ 62 (122)
+.-+++||++-|-|+.-- ..|.+ -+.-=|=|+-|+|--++
T Consensus 9 ~~~vkPG~Sl~LsC~~SG-~t~~~-~~~~WvRQ~PGkglEw~ 48 (109)
T d2ck0h1 9 GGLVQPRGSLKLSCAASG-FTFNT-DAMNWVRQAPGKGLEWV 48 (109)
T ss_dssp CEEECTTCCEEEEEEEES-SCGGG-SCEEEEEECTTSCEEEE
T ss_pred CCEECCCCCEEEEEEECC-CCCCC-CCCCCCEECCCCCEECC
T ss_conf 875999999698898888-95436-65501112898620105
No 75
>d1kgce1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}
Probab=20.96 E-value=30 Score=14.54 Aligned_cols=38 Identities=29% Similarity=0.408 Sum_probs=24.4
Q ss_pred EECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEE
Q ss_conf 3233120489737999887107860475689988866896798
Q T0552 18 MPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTL 60 (122)
Q Consensus 18 mPv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L 60 (122)
.|.-.-...|++|.|+|+.. .++ -|-.=|-|..|++-.
T Consensus 5 ~P~~~~~~~G~svtl~C~~~-~~~----~~i~WYrQ~~g~~~~ 42 (112)
T d1kgce1 5 SPRYKVAKRGQDVALRCDPI-SGH----VSLFWYQQALGQGPE 42 (112)
T ss_dssp ECSEEEEETTCCEEEEEECC-TTC----CEEEEEEECTTSCCE
T ss_pred CCCEEEECCCCCEEEEEEEC-CCC----CEEEEEEEECCCCEE
T ss_conf 99848988999999999989-999----878961620365317
No 76
>d1lp9e1 b.1.1.1 (E:0-117) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}
Probab=20.77 E-value=31 Score=14.52 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=24.3
Q ss_pred ECCHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEE
Q ss_conf 2331204897379998871078604756899888668967988
Q T0552 19 PVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGTLK 61 (122)
Q Consensus 19 Pv~k~I~~GetvEIRc~L~reG~y~~t~Y~IRYFQ~dG~G~L~ 61 (122)
|..-....|++|.|.|.+..... . |.-=|-|..|+|--.
T Consensus 8 ~~~v~v~~G~~vtL~C~~~~~~~--~--~i~Wyrq~~g~~~~~ 46 (115)
T d1lp9e1 8 EGLVTLTEGLPVMLNCTYQSTYS--P--FLFWYVQHLNEAPKL 46 (115)
T ss_dssp CSEEEEETTSCEEECEEEECSSS--C--CEEEEEECTTSCCEE
T ss_pred CCEEEECCCCCEEEEEEEECCCC--C--CEEEEEECCCCCEEE
T ss_conf 99399879999999999807976--8--706899179985031
Done!