Query T0555 SgR209C, , 148 residues
Match_columns 148
No_of_seqs 110 out of 283
Neff 4.5
Searched_HMMs 15564
Date Fri May 21 18:06:29 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0555.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/hhm/T0555.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1e32a2 c.37.1.20 (A:201-458) 58.0 6.1 0.00039 18.5 3.8 54 76-130 162-216 (258)
2 d1ksoa_ a.39.1.2 (A:) Calcycli 55.4 5.3 0.00034 18.9 3.1 65 21-85 28-92 (93)
3 d3c1va1 a.39.1.2 (A:2-94) Calc 49.7 9.5 0.00061 17.3 4.5 65 21-85 28-92 (93)
4 d1np3a1 a.100.1.2 (A:183-327) 40.8 9.2 0.00059 17.4 2.4 64 72-136 5-76 (145)
5 d1ucva_ a.60.1.2 (A:) Ephrin t 38.2 8.6 0.00055 17.6 1.9 29 58-87 4-32 (81)
6 d1auib_ a.39.1.5 (B:) Calcineu 36.6 14 0.00093 16.1 2.9 55 55-116 58-114 (165)
7 d1k94a_ a.39.1.8 (A:) Grancalc 36.4 15 0.00097 15.9 3.5 98 21-120 16-119 (165)
8 d2jf2a1 b.81.1.1 (A:1-262) UDP 35.8 15 0.00099 15.9 4.6 53 19-75 205-257 (262)
9 d1a4pa_ a.39.1.2 (A:) Calcycli 35.5 16 0.001 15.9 4.1 54 20-73 24-77 (92)
10 d2pp4a1 a.277.1.1 (A:119-225) 30.7 19 0.0012 15.4 3.1 43 39-86 19-61 (107)
11 d1oqpa_ a.39.1.5 (A:) Caltract 30.2 7.1 0.00045 18.1 0.5 20 58-77 58-77 (77)
12 d1zfsa1 a.39.1.2 (A:1-93) Calc 28.6 12 0.00076 16.6 1.4 57 21-77 28-84 (93)
13 d1e8aa_ a.39.1.2 (A:) Calcycli 28.6 17 0.0011 15.6 2.2 53 21-73 27-79 (87)
14 d1g8ia_ a.39.1.5 (A:) Frequeni 25.5 23 0.0015 14.8 4.6 52 57-116 72-125 (187)
15 d1avca1 a.65.1.1 (A:10-350) An 24.8 24 0.0015 14.7 6.4 103 22-141 114-216 (341)
16 d1or7c_ a.180.1.1 (C:) N-termi 24.6 20 0.0013 15.2 1.9 36 54-90 6-41 (66)
17 d1tiza_ a.39.1.5 (A:) Calmodul 24.5 24 0.0015 14.6 3.6 37 58-120 14-50 (67)
18 d1wp1a_ f.5.1.1 (A:) Outer mem 23.6 25 0.0016 14.5 4.7 57 48-104 187-243 (456)
19 d1brwa1 a.46.2.1 (A:1-70) Pyri 23.0 18 0.0012 15.4 1.5 41 91-133 21-67 (70)
20 d1or7c_ a.180.1.1 (C:) N-termi 22.6 23 0.0015 14.7 1.9 40 54-97 6-45 (66)
21 d1pvaa_ a.39.1.4 (A:) Parvalbu 22.4 25 0.0016 14.5 2.1 62 58-120 20-93 (109)
22 d1ezwa_ c.1.16.3 (A:) Coenzyme 22.1 14 0.00087 16.2 0.7 44 104-147 301-347 (347)
No 1
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=58.01 E-value=6.1 Score=18.52 Aligned_cols=54 Identities=6% Similarity=-0.133 Sum_probs=29.4
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHH-HHHHHCC
Q ss_conf 888722566870689999877750789989889999999987168224-5665338
Q T0555 76 LYRKQFFEPFINSRALELAFRHILGRGPSSREEVQKYFSIVSSGGLPA-LVDALVD 130 (148)
Q Consensus 76 ~yr~~f~~~~~~~r~iEl~~khlLGR~p~~~~Ei~~~~~i~a~~G~~a-~Id~lid 130 (148)
.|-..++-+.|+....+..++++|+..+.+...- -....-.+.||.+ .|..+++
T Consensus 162 Rfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~~-~~~la~~t~G~s~adl~~lv~ 216 (258)
T d1e32a2 162 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVD-LEQVANETHGHVGADLAALCS 216 (258)
T ss_dssp SSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTCC-HHHHHHHCTTCCHHHHHHHHH
T ss_pred CCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCC-HHHHHHCCCCCCHHHHHHHHH
T ss_conf 3023237899998899987322045763345530-344442066778999999999
No 2
>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}
Probab=55.39 E-value=5.3 Score=18.91 Aligned_cols=65 Identities=15% Similarity=0.255 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCC
Q ss_conf 89888999999998988400000021000156788772688788999999842578887225668
Q T0555 21 LSALEKNAVIKAAYRQIFERDITKAYSQSISYLESQVRNGDISMKEFVRRLAKSPLYRKQFFEPF 85 (148)
Q Consensus 21 ~s~~e~~~vI~AaYrQVf~~~~~~~~s~r~~~lESqlrnG~IsVreFVr~la~S~~yr~~f~~~~ 85 (148)
.+..|+..++++-....+++.....+-.++...--.=.+|.|+-.||+.-+++--.--..|+..+
T Consensus 28 ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~~~~h~~~~~~ 92 (93)
T d1ksoa_ 28 LCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLCLYCHEYFKDC 92 (93)
T ss_dssp EEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHHHHHCGGGTTC
T ss_pred ECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 87999999999864402456899999999999975799997969999999999999999997429
No 3
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}
Probab=49.73 E-value=9.5 Score=17.27 Aligned_cols=65 Identities=17% Similarity=0.271 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCC
Q ss_conf 89888999999998988400000021000156788772688788999999842578887225668
Q T0555 21 LSALEKNAVIKAAYRQIFERDITKAYSQSISYLESQVRNGDISMKEFVRRLAKSPLYRKQFFEPF 85 (148)
Q Consensus 21 ~s~~e~~~vI~AaYrQVf~~~~~~~~s~r~~~lESqlrnG~IsVreFVr~la~S~~yr~~f~~~~ 85 (148)
.+..|+..++++.....+++.....+-+++...=-.=++|.|+-.||+.-+.+-..--..+|..+
T Consensus 28 L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~~~~~~~~~~~ 92 (93)
T d3c1va1 28 LNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAMMCNEFFEGF 92 (93)
T ss_dssp ECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHTTTSC
T ss_pred ECHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 67999999999744210356899999999999982799997979999999999999999987249
No 4
>d1np3a1 a.100.1.2 (A:183-327) Class I ketol-acid reductoisomerase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=40.75 E-value=9.2 Score=17.36 Aligned_cols=64 Identities=14% Similarity=0.276 Sum_probs=43.7
Q ss_pred HCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCH--------HHHHHHHHHHHHCCCHHHHHHHCCCHHHHH
Q ss_conf 42578887225668706899998777507899898--------899999999871682245665338578885
Q T0555 72 AKSPLYRKQFFEPFINSRALELAFRHILGRGPSSR--------EEVQKYFSIVSSGGLPALVDALVDSQEYAD 136 (148)
Q Consensus 72 a~S~~yr~~f~~~~~~~r~iEl~~khlLGR~p~~~--------~Ei~~~~~i~a~~G~~a~Id~lidS~EY~~ 136 (148)
..||+|-.+-.=+-.....|+.+|.+|.--. +.+ .|+---.++++++|+..+..++-|+.||-.
T Consensus 5 ~~sDlfgEq~vL~Ggv~~~~~~~fe~lve~G-~~pe~Ay~e~~he~~lI~~li~~~Gl~~m~~~iSdTAeyG~ 76 (145)
T d1np3a1 5 TETDLFGEQAVLCGGCVELVKAGFETLVEAG-YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGE 76 (145)
T ss_dssp HHHHHHHHHHTTTHHHHHHHHHHHHHHHHTT-CCHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 1223110289997799999999999999839-86999999999701136899999739999998530888999
No 5
>d1ucva_ a.60.1.2 (A:) Ephrin type-A receptor 8, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.23 E-value=8.6 Score=17.56 Aligned_cols=29 Identities=10% Similarity=0.293 Sum_probs=22.9
Q ss_pred HCCCCCHHHHHHHHHCCHHHHHHCCCCCCH
Q ss_conf 268878899999984257888722566870
Q T0555 58 RNGDISMKEFVRRLAKSPLYRKQFFEPFIN 87 (148)
Q Consensus 58 rnG~IsVreFVr~la~S~~yr~~f~~~~~~ 87 (148)
.+|.+||.++.+.|..++ |...|-+....
T Consensus 4 ~~~~~sV~~WL~~lgL~q-Y~~~F~~~gi~ 32 (81)
T d1ucva_ 4 GSSGLTVGDWLDSIRMGR-YRDHFAAGGYS 32 (81)
T ss_dssp CCCCSBHHHHHHHTTCGG-GHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHCCCHH-HHHHHHHCCCC
T ss_conf 999872999998886499-99999995996
No 6
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.65 E-value=14 Score=16.08 Aligned_cols=55 Identities=22% Similarity=0.278 Sum_probs=35.4
Q ss_pred HHHHCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHC--CCCCCCHHHHHHHHHHH
Q ss_conf 877268878899999984257888722566870689999877750--78998988999999998
Q T0555 55 SQVRNGDISMKEFVRRLAKSPLYRKQFFEPFINSRALELAFRHIL--GRGPSSREEVQKYFSIV 116 (148)
Q Consensus 55 SqlrnG~IsVreFVr~la~S~~yr~~f~~~~~~~r~iEl~~khlL--GR~p~~~~Ei~~~~~i~ 116 (148)
..=.+|.|+-.||++.++.- -........+...|+.+= |-...+..|+.......
T Consensus 58 d~~~~g~i~~~EFl~~~~~~-------~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~ 114 (165)
T d1auib_ 58 DTDGNGEVDFKEFIEGVSQF-------SVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 114 (165)
T ss_dssp CTTCSSSEEHHHHHHHHGGG-------CTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 32310124466663210012-------2100257899999987502432223289999999975
No 7
>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.39 E-value=15 Score=15.95 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHC--CCCCC----HHHHHHHH
Q ss_conf 8988899999999898840000002100015678877268878899999984257888722--56687----06899998
Q T0555 21 LSALEKNAVIKAAYRQIFERDITKAYSQSISYLESQVRNGDISMKEFVRRLAKSPLYRKQF--FEPFI----NSRALELA 94 (148)
Q Consensus 21 ~s~~e~~~vI~AaYrQVf~~~~~~~~s~r~~~lESqlrnG~IsVreFVr~la~S~~yr~~f--~~~~~----~~r~iEl~ 94 (148)
.+..|++.+.++.-....+....+.....+...=..=.+|.|+..||+.....-..++.-| |+... ...=...+
T Consensus 16 I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~~~~~~~F~~fD~d~sG~I~~~El~~~ 95 (165)
T d1k94a_ 16 VDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQA 95 (165)
T ss_dssp BCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHHHHHCTTCCSBCCHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEECHHHHHHH
T ss_conf 87999999999818997766479999999999857899972758999887621202378999838999984769999999
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 77750789989889999999987168
Q T0555 95 FRHILGRGPSSREEVQKYFSIVSSGG 120 (148)
Q Consensus 95 ~khlLGR~p~~~~Ei~~~~~i~a~~G 120 (148)
.+.+ |-. .+.+|+...+......|
T Consensus 96 l~~~-G~~-l~~~~~~~l~~~~d~~g 119 (165)
T d1k94a_ 96 IGLM-GYR-LSPQTLTTIVKRYSKNG 119 (165)
T ss_dssp HHHT-TCC-CCHHHHHHHHHHHCBTT
T ss_pred HHHH-HHC-CCHHHHHHHHHHCCCCC
T ss_conf 9985-312-99999999999939999
No 8
>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]} SCOP: d1j2za_
Probab=35.79 E-value=15 Score=15.89 Aligned_cols=53 Identities=21% Similarity=0.285 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCH
Q ss_conf 898988899999999898840000002100015678877268878899999984257
Q T0555 19 PGLSALEKNAVIKAAYRQIFERDITKAYSQSISYLESQVRNGDISMKEFVRRLAKSP 75 (148)
Q Consensus 19 ~~~s~~e~~~vI~AaYrQVf~~~~~~~~s~r~~~lESqlrnG~IsVreFVr~la~S~ 75 (148)
-+.+.+++ ..|+.+||.+|..... ..+.+..+|.+..+-. .|++|+.-+..|+
T Consensus 205 ~~~~~~~i-~~l~~~~k~lf~~~~~--~~~~~~~~~~~~~~~~-~v~~~~~fi~~s~ 257 (262)
T d2jf2a1 205 RGFSREAI-TAIRNAYKLIYRSGKT--LDEVKPEIAELAETYP-EVKAFTDFFARST 257 (262)
T ss_dssp TTCCHHHH-HHHHHHHHHHHTSCCC--HHHHHHHHHHHHTTCG-GGHHHHHHHHHCC
T ss_pred CCCCHHHH-HHHHHHHHHHHHCCCC--HHHHHHHHHHHCCCCH-HHHHHHHHHHCCC
T ss_conf 27898999-9999999999726997--8999999998522567-7999999985378
No 9
>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}
Probab=35.47 E-value=16 Score=15.86 Aligned_cols=54 Identities=15% Similarity=0.223 Sum_probs=31.1
Q ss_pred CCCHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
Q ss_conf 989888999999998988400000021000156788772688788999999842
Q T0555 20 GLSALEKNAVIKAAYRQIFERDITKAYSQSISYLESQVRNGDISMKEFVRRLAK 73 (148)
Q Consensus 20 ~~s~~e~~~vI~AaYrQVf~~~~~~~~s~r~~~lESqlrnG~IsVreFVr~la~ 73 (148)
..|.+|+..++.+......+....+..-+++...=-.=.+|.|+-.||+.-+++
T Consensus 24 ~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 77 (92)
T d1a4pa_ 24 YLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (92)
T ss_dssp SBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred EECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 773999999999856533433278999999999981799998959999999999
No 10
>d2pp4a1 a.277.1.1 (A:119-225) ETO {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.67 E-value=19 Score=15.35 Aligned_cols=43 Identities=19% Similarity=0.242 Sum_probs=30.0
Q ss_pred CCHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCCC
Q ss_conf 000000210001567887726887889999998425788872256687
Q T0555 39 ERDITKAYSQSISYLESQVRNGDISMKEFVRRLAKSPLYRKQFFEPFI 86 (148)
Q Consensus 39 ~~~~~~~~s~r~~~lESqlrnG~IsVreFVr~la~S~~yr~~f~~~~~ 86 (148)
+.+..+.-+++...+=-.|.+|.|++.||...| ++...+.+-+
T Consensus 19 ~~~~~pe~~~~Vr~LV~~L~~~~i~~EeF~~~L-----q~~lns~pqP 61 (107)
T d2pp4a1 19 GNDISPEIGERVRTLVLGLVNSTLTIEEFHSKL-----QEATNFPLRP 61 (107)
T ss_dssp HHHHCSTHHHHHHHHHHHHHTTCSCHHHHHHHH-----HHHHCCCCCT
T ss_pred HCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH-----HHHHCCCCCC
T ss_conf 566883388999999999983886899999999-----9996699997
No 11
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=30.22 E-value=7.1 Score=18.10 Aligned_cols=20 Identities=30% Similarity=0.677 Sum_probs=12.4
Q ss_pred HCCCCCHHHHHHHHHCCHHH
Q ss_conf 26887889999998425788
Q T0555 58 RNGDISMKEFVRRLAKSPLY 77 (148)
Q Consensus 58 rnG~IsVreFVr~la~S~~y 77 (148)
.+|.|+..||++-+.++.+|
T Consensus 58 ~~G~I~~~EF~~~m~k~~~~ 77 (77)
T d1oqpa_ 58 DDNEIDEDEFIRIMKKTSLF 77 (77)
T ss_dssp SSSEECHHHHHHHHHHTTCC
T ss_pred CCCCEEHHHHHHHHHCCCCC
T ss_conf 88939199999999704789
No 12
>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}
Probab=28.62 E-value=12 Score=16.64 Aligned_cols=57 Identities=16% Similarity=0.208 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH
Q ss_conf 898889999999989884000000210001567887726887889999998425788
Q T0555 21 LSALEKNAVIKAAYRQIFERDITKAYSQSISYLESQVRNGDISMKEFVRRLAKSPLY 77 (148)
Q Consensus 21 ~s~~e~~~vI~AaYrQVf~~~~~~~~s~r~~~lESqlrnG~IsVreFVr~la~S~~y 77 (148)
.|.+|+..+++....-+..+......-+++...--.=.+|.|+-.||+..+++-..-
T Consensus 28 is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~~~ 84 (93)
T d1zfsa1 28 LSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTVA 84 (93)
T ss_dssp EEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHHHH
T ss_pred ECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 519999999998652113568999999999999749999979699999999999999
No 13
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}
Probab=28.56 E-value=17 Score=15.56 Aligned_cols=53 Identities=17% Similarity=0.140 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
Q ss_conf 89888999999998988400000021000156788772688788999999842
Q T0555 21 LSALEKNAVIKAAYRQIFERDITKAYSQSISYLESQVRNGDISMKEFVRRLAK 73 (148)
Q Consensus 21 ~s~~e~~~vI~AaYrQVf~~~~~~~~s~r~~~lESqlrnG~IsVreFVr~la~ 73 (148)
+|..|+..+++.-......+...+..-+.+...--.=.+|+|+-.||+.-+++
T Consensus 27 Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 27 LSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp ECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred ECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 86999999999872212467899999999999875799986979999999999
No 14
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.55 E-value=23 Score=14.77 Aligned_cols=52 Identities=21% Similarity=0.322 Sum_probs=31.1
Q ss_pred HHCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHH--CCCCCCCHHHHHHHHHHH
Q ss_conf 726887889999998425788872256687068999987775--078998988999999998
Q T0555 57 VRNGDISMKEFVRRLAKSPLYRKQFFEPFINSRALELAFRHI--LGRGPSSREEVQKYFSIV 116 (148)
Q Consensus 57 lrnG~IsVreFVr~la~S~~yr~~f~~~~~~~r~iEl~~khl--LGR~p~~~~Ei~~~~~i~ 116 (148)
=.+|.|+.+||+.++..-. ..+.-.-++.+|+.+ =|-.-.+.+|+......+
T Consensus 72 ~~dg~I~~~EF~~~l~~~~--------~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~ 125 (187)
T d1g8ia_ 72 NKDGRIEFSEFIQALSVTS--------RGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI 125 (187)
T ss_dssp TCSSEEEHHHHHHHHHHHH--------HCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHH
T ss_conf 8999785999999999865--------47603369999999806999769699999999997
No 15
>d1avca1 a.65.1.1 (A:10-350) Annexin VI {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.83 E-value=24 Score=14.69 Aligned_cols=103 Identities=13% Similarity=0.213 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 98889999999989884000000210001567887726887889999998425788872256687068999987775078
Q T0555 22 SALEKNAVIKAAYRQIFERDITKAYSQSISYLESQVRNGDISMKEFVRRLAKSPLYRKQFFEPFINSRALELAFRHILGR 101 (148)
Q Consensus 22 s~~e~~~vI~AaYrQVf~~~~~~~~s~r~~~lESqlrnG~IsVreFVr~la~S~~yr~~f~~~~~~~r~iEl~~khlLGR 101 (148)
|.+++.. |+.+|++.|+++.... +.+.+ .| ..+.++-++++....-....+..-.-.-++..++.+-|+
T Consensus 114 s~~ei~~-ik~aY~~~y~~~L~~d-------I~~e~-sg--~~~~ll~~ll~~~R~e~~~vd~~~a~~DA~~L~~A~~~k 182 (341)
T d1avca1 114 TNEQIHQ-LVAAYKDAYERDLEAD-------ITGDT-SG--HFRKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELK 182 (341)
T ss_dssp CHHHHHH-HHHHHHHHHCCCHHHH-------HHTTC-CT--HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHTTTS
T ss_pred CHHHHHH-HHHHHHHHCCCCHHHH-------HHHCC-CH--HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 8799999-9999988538768999-------86346-68--899999999854777788889778688999999986354
Q ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCC
Q ss_conf 9989889999999987168224566533857888507865
Q T0555 102 GPSSREEVQKYFSIVSSGGLPALVDALVDSQEYADYFGEE 141 (148)
Q Consensus 102 ~p~~~~Ei~~~~~i~a~~G~~a~Id~lidS~EY~~~FG~d 141 (148)
-.- +...++.|+++....-+-.-. .+|.+..|.+
T Consensus 183 ~gt---de~~~i~IL~~rs~~hL~~i~---~~Y~~~~g~~ 216 (341)
T d1avca1 183 WGT---DEAQFIYILGNRSKQHLRLVF---DEYLKTTGKP 216 (341)
T ss_dssp SSC---CHHHHHHHHHHSCHHHHHHHH---HHHHHHHSSC
T ss_pred CCC---CHHHHEECCCCCCHHHHHHHH---HHHHHHCCCC
T ss_conf 787---613540000689999999999---9999862888
No 16
>d1or7c_ a.180.1.1 (C:) N-terminal, cytoplasmic domain of anti-sigmaE factor RseA {Escherichia coli [TaxId: 562]} SCOP: d1or7f_
Probab=24.59 E-value=20 Score=15.15 Aligned_cols=36 Identities=25% Similarity=0.377 Sum_probs=27.8
Q ss_pred HHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHH
Q ss_conf 8877268878899999984257888722566870689
Q T0555 54 ESQVRNGDISMKEFVRRLAKSPLYRKQFFEPFINSRA 90 (148)
Q Consensus 54 ESqlrnG~IsVreFVr~la~S~~yr~~f~~~~~~~r~ 90 (148)
=|-|.+|+++--++++.|.+++..|.. |..+.-.+-
T Consensus 6 lSAL~DGE~~~~el~~~l~~d~e~r~~-W~~Yhli~d 41 (66)
T d1or7c_ 6 LSALMDGETLDSELLNELAHNPEMQKT-WESYHLIRD 41 (66)
T ss_dssp HHHHHTTSCCCHHHHHHHHTCHHHHHH-HHHHHHHHH
T ss_pred HHHHHCCCCCHHHHHHHHHCCHHHHHH-HHHHHHHHH
T ss_conf 555544899868899988438888999-999999999
No 17
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.49 E-value=24 Score=14.65 Aligned_cols=37 Identities=22% Similarity=0.462 Sum_probs=24.7
Q ss_pred HCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 268878899999984257888722566870689999877750789989889999999987168
Q T0555 58 RNGDISMKEFVRRLAKSPLYRKQFFEPFINSRALELAFRHILGRGPSSREEVQKYFSIVSSGG 120 (148)
Q Consensus 58 rnG~IsVreFVr~la~S~~yr~~f~~~~~~~r~iEl~~khlLGR~p~~~~Ei~~~~~i~a~~G 120 (148)
.+|.|+..||...+.. ||..+ +++|+..++..+...|
T Consensus 14 ~~G~I~~~El~~~l~~-------------------------lg~~~-~~~~i~~~~~~~D~d~ 50 (67)
T d1tiza_ 14 KDGKLSLDEFREVALA-------------------------FSPYF-TQEDIVKFFEEIDVDG 50 (67)
T ss_dssp SSSCEEHHHHHHHHHH-------------------------TCTTS-CHHHHHHHHHHHCCSS
T ss_pred CCCCCCHHHHHHHHHH-------------------------HCCCC-CHHHHHHHHHHHCCCC
T ss_conf 8392869999999997-------------------------43365-5489999999857998
No 18
>d1wp1a_ f.5.1.1 (A:) Outer membrane protein OprM {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.60 E-value=25 Score=14.54 Aligned_cols=57 Identities=14% Similarity=0.028 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 001567887726887889999998425788872256687068999987775078998
Q T0555 48 QSISYLESQVRNGDISMKEFVRRLAKSPLYRKQFFEPFINSRALELAFRHILGRGPS 104 (148)
Q Consensus 48 ~r~~~lESqlrnG~IsVreFVr~la~S~~yr~~f~~~~~~~r~iEl~~khlLGR~p~ 104 (148)
..+..++.++..|.++--|..+.-+.=..-+......-.+.+.....++.++|.++.
T Consensus 187 ~~~~~~~~r~~~G~~~~~d~~~a~~~l~~~~~~l~~~~~~~~~a~~~L~~llg~~~~ 243 (456)
T d1wp1a_ 187 KSFDLTQRSYDVGVASALDLRQAQTAVEGARATLAQYTRLVAQDQNALVLLLGSGIP 243 (456)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999888637852010004788999999889999999999999999998289975
No 19
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} SCOP: d2tpta1 d1uoua1
Probab=23.04 E-value=18 Score=15.38 Aligned_cols=41 Identities=24% Similarity=0.225 Sum_probs=28.9
Q ss_pred HHHHHHHHC-CCCCCCHHHHHHHHHHHHHCC-----CHHHHHHHCCCHH
Q ss_conf 999877750-789989889999999987168-----2245665338578
Q T0555 91 LELAFRHIL-GRGPSSREEVQKYFSIVSSGG-----LPALVDALVDSQE 133 (148)
Q Consensus 91 iEl~~khlL-GR~p~~~~Ei~~~~~i~a~~G-----~~a~Id~lidS~E 133 (148)
+...+..++ |+ .++.++.+|...+..+| ..++++++++|.|
T Consensus 21 ~~~~~~~i~~g~--~sd~qi~afL~al~~kG~t~eEi~~~~~am~~sg~ 67 (70)
T d1brwa1 21 IEWIVRGYTNGD--IPDYQMSALAMAIYFRGMTEEETAALTMAMVQSGE 67 (70)
T ss_dssp HHHHHHHHHTTS--SCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHCCC--CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 999999985799--99888999999986079989889999999988231
No 20
>d1or7c_ a.180.1.1 (C:) N-terminal, cytoplasmic domain of anti-sigmaE factor RseA {Escherichia coli [TaxId: 562]}
Probab=22.59 E-value=23 Score=14.75 Aligned_cols=40 Identities=23% Similarity=0.341 Sum_probs=30.0
Q ss_pred HHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 88772688788999999842578887225668706899998777
Q T0555 54 ESQVRNGDISMKEFVRRLAKSPLYRKQFFEPFINSRALELAFRH 97 (148)
Q Consensus 54 ESqlrnG~IsVreFVr~la~S~~yr~~f~~~~~~~r~iEl~~kh 97 (148)
=|-|.+|+++--++++.|.+++..|.. |.. |..|--+.+.
T Consensus 6 lSAL~DgE~~~~el~~~l~~d~e~~~~-W~~---Yhli~d~lr~ 45 (66)
T d1or7c_ 6 LSALMDGETLDSELLNELAHNPEMQKT-WES---YHLIRDSMRG 45 (66)
T ss_dssp HHHHHTTSCCCHHHHHHHHTCHHHHHH-HHH---HHHHHHHHHT
T ss_pred HHHHHCCCCCHHHHHHHHHCCHHHHHH-HHH---HHHHHHHHHC
T ss_conf 999992887739999998659999999-999---9999999865
No 21
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}
Probab=22.39 E-value=25 Score=14.52 Aligned_cols=62 Identities=15% Similarity=0.240 Sum_probs=29.9
Q ss_pred HCCCCCHHHHHHHHHCCH--------HHHHHCCCCCCHHHHHHH--HHHHH--CCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 268878899999984257--------888722566870689999--87775--0789989889999999987168
Q T0555 58 RNGDISMKEFVRRLAKSP--------LYRKQFFEPFINSRALEL--AFRHI--LGRGPSSREEVQKYFSIVSSGG 120 (148)
Q Consensus 58 rnG~IsVreFVr~la~S~--------~yr~~f~~~~~~~r~iEl--~~khl--LGR~p~~~~Ei~~~~~i~a~~G 120 (148)
.+|.|+-.||+..++.+. .|+..=.+...-.-.-|+ ..+.+ .|+. .+.+|+..++......|
T Consensus 20 ~dG~idf~EF~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~-ls~~ev~~~~~~~D~d~ 93 (109)
T d1pvaa_ 20 AEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRD-LTDAETKAFLKAADKDG 93 (109)
T ss_dssp STTCCCHHHHHHHHTCTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCC-CCHHHHHHHHHHHCTTC
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHCCCC
T ss_conf 899786999999998714999999998418158996857399999999984204788-99999999999978997
No 22
>d1ezwa_ c.1.16.3 (A:) Coenzyme F420 dependent tetrahydromethanopterin reductase {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=22.06 E-value=14 Score=16.25 Aligned_cols=44 Identities=16% Similarity=0.316 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHC---CCHHHHHCCCCCCCCCCC
Q ss_conf 89889999999987168224566533---857888507865788889
Q T0555 104 SSREEVQKYFSIVSSGGLPALVDALV---DSQEYADYFGEETVPYLR 147 (148)
Q Consensus 104 ~~~~Ei~~~~~i~a~~G~~a~Id~li---dS~EY~~~FG~d~VPY~R 147 (148)
-+++++...+.-+.+.|.+.++=.+. +-.+-.+.||++++|..|
T Consensus 301 Gspe~v~~~l~~~~~~G~d~~~l~~~~~~~~~~~l~~fa~~ViP~lr 347 (347)
T d1ezwa_ 301 GDPDTVVDKIEELLKAGVTQVVVGSPIGPDKEKAIELVGQEVIPHFK 347 (347)
T ss_dssp ESHHHHHHHHHHHHHTTCCEEEECTTBCSSHHHHHHHHHHHTGGGTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 69999999999999649998999578886888999999961002879
Done!