Query T0558 ZP_01960044.1, Bacteroides caccae, 294 residues
Match_columns 294
No_of_seqs 145 out of 754
Neff 10.3
Searched_HMMs 22458
Date Tue May 25 15:56:06 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0558.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0558.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gxr_A ESG1, transducin-like e 99.9 1.1E-20 5.1E-25 166.3 33.6 228 16-251 56-296 (337)
2 1nr0_A Actin interacting prote 99.9 5.4E-20 2.4E-24 161.4 36.9 201 16-222 64-279 (611)
3 3acp_A WD40 protein, WD repeat 99.9 1.6E-21 7.2E-26 172.5 28.6 231 18-249 101-360 (417)
4 1gxr_A ESG1, transducin-like e 99.9 7.3E-20 3.3E-24 160.4 35.6 228 17-278 103-336 (337)
5 3dm0_A Maltose-binding peripla 99.9 3.4E-20 1.5E-24 162.8 31.6 227 20-251 391-632 (694)
6 1nr0_A Actin interacting prote 99.9 3.5E-20 1.6E-24 162.7 30.1 200 14-221 21-229 (611)
7 1k8k_C P40, ARP2/3 complex 41 99.9 1.8E-19 8.1E-24 157.5 30.4 216 16-233 13-253 (372)
8 1erj_A Transcriptional repress 99.9 9.4E-19 4.2E-23 152.3 32.2 245 16-280 69-390 (393)
9 1got_B GT-beta; complex (GTP-b 99.9 6.5E-18 2.9E-22 146.2 36.3 221 16-248 60-288 (340)
10 1vyh_C Platelet-activating fac 99.9 3.3E-18 1.5E-22 148.4 32.9 228 17-251 114-369 (410)
11 3emh_A WD repeat-containing pr 99.9 2.8E-17 1.3E-21 141.5 37.6 253 17-276 35-302 (318)
12 1r5m_A SIR4-interacting protei 99.9 1.8E-18 8.1E-23 150.2 29.6 226 22-249 57-359 (425)
13 1got_B GT-beta; complex (GTP-b 99.9 6.2E-17 2.8E-21 139.0 33.7 220 16-247 102-329 (340)
14 1pgu_A Actin interacting prote 99.9 6.2E-18 2.8E-22 146.3 28.5 232 17-251 70-328 (615)
15 2pbi_B Guanine nucleotide-bind 99.9 5.9E-17 2.6E-21 139.2 33.0 199 17-220 70-278 (354)
16 1erj_A Transcriptional repress 99.8 2E-16 8.9E-21 135.3 34.4 190 26-221 33-246 (393)
17 3ei4_B DNA damage-binding prot 99.8 1.2E-18 5.4E-23 151.5 22.3 194 18-218 127-333 (436)
18 3fm0_A Protein CIAO1; WDR39,SG 99.8 3E-16 1.3E-20 134.1 33.7 266 16-284 21-340 (345)
19 1r5m_A SIR4-interacting protei 99.8 2.4E-17 1.1E-21 142.0 26.6 199 17-224 114-373 (425)
20 2oaj_A Protein SNI1; WD40 repe 99.8 4.8E-17 2.1E-21 139.9 27.8 205 15-222 21-251 (902)
21 1nex_B CDC4 protein, SCCDC4; W 99.8 1.8E-16 8E-21 135.6 30.5 263 19-282 128-424 (464)
22 3frx_A Guanine nucleotide-bind 99.8 4.3E-16 1.9E-20 132.9 32.4 199 18-224 24-238 (319)
23 3acp_A WD40 protein, WD repeat 99.8 6.3E-17 2.8E-21 139.0 26.9 252 22-281 64-364 (417)
24 1pgu_A Actin interacting prote 99.8 2.7E-16 1.2E-20 134.3 29.6 257 16-280 23-329 (615)
25 3jro_A Fusion protein of prote 99.8 3.2E-17 1.4E-21 141.2 24.3 195 16-215 14-240 (753)
26 3ei3_B DNA damage-binding prot 99.8 7.6E-16 3.4E-20 131.1 30.8 191 18-215 80-284 (383)
27 1vyh_C Platelet-activating fac 99.8 4.9E-16 2.2E-20 132.5 29.7 172 52-229 106-281 (410)
28 3emh_A WD repeat-containing pr 99.8 2.6E-15 1.2E-19 127.2 33.1 218 18-247 78-302 (318)
29 3dwl_C Actin-related protein 2 99.8 2.9E-18 1.3E-22 148.7 17.1 198 16-216 16-239 (377)
30 2aq5_A Coronin-1A; WD40 repeat 99.8 1E-16 4.5E-21 137.5 24.4 220 28-251 52-299 (402)
31 3k26_A Polycomb protein EED; W 99.8 9.3E-17 4.2E-21 137.7 23.7 253 22-279 33-355 (366)
32 3bws_A Protein LP49; two-domai 99.8 6.4E-15 2.9E-19 124.3 32.8 251 16-280 127-421 (433)
33 3k26_A Polycomb protein EED; W 99.8 1.4E-14 6.1E-19 121.9 34.5 225 17-248 79-353 (366)
34 2zkq_a 40S ribosomal protein R 99.8 2.4E-14 1.1E-18 120.2 35.7 228 18-251 22-263 (317)
35 3dm0_A Maltose-binding peripla 99.8 2.3E-15 1E-19 127.5 30.3 199 17-223 436-642 (694)
36 2hes_X YDR267CP; beta-propelle 99.8 1.3E-15 5.9E-20 129.3 28.4 189 23-213 24-230 (330)
37 3jrp_A Fusion protein of prote 99.8 2.4E-15 1.1E-19 127.4 29.7 199 17-220 17-249 (379)
38 3gre_A Serine/threonine-protei 99.8 7.2E-17 3.2E-21 138.6 20.6 203 18-224 70-303 (437)
39 2aq5_A Coronin-1A; WD40 repeat 99.8 2.8E-16 1.2E-20 134.3 23.1 195 17-215 87-301 (402)
40 1k8k_C P40, ARP2/3 complex 41 99.8 3.5E-15 1.6E-19 126.2 28.1 200 16-216 57-279 (372)
41 3ei4_B DNA damage-binding prot 99.8 2.2E-16 9.6E-21 135.1 21.8 221 18-247 172-418 (436)
42 1sq9_A Antiviral protein SKI8; 99.8 1.8E-15 8.1E-20 128.3 26.5 180 93-275 185-390 (397)
43 1l0q_A Surface layer protein; 99.8 9.3E-13 4.1E-17 108.6 38.0 190 24-223 3-199 (391)
44 2oaj_A Protein SNI1; WD40 repe 99.8 1.1E-14 4.9E-19 122.6 28.1 158 16-176 63-246 (902)
45 1p22_A F-BOX/WD-repeat protein 99.8 2.2E-14 9.7E-19 120.5 29.6 263 20-293 140-428 (435)
46 2hes_X YDR267CP; beta-propelle 99.8 5.8E-15 2.6E-19 124.7 26.5 195 17-217 64-284 (330)
47 3dw8_B Serine/threonine-protei 99.8 1.3E-15 5.9E-20 129.3 23.1 197 16-214 33-316 (447)
48 3dw8_B Serine/threonine-protei 99.8 1.6E-15 7.2E-20 128.7 23.1 199 20-219 104-379 (447)
49 3bws_A Protein LP49; two-domai 99.7 7.8E-14 3.5E-18 116.4 30.9 215 21-251 178-422 (433)
50 2ovr_B FBW7, F-BOX/WD repeat p 99.7 1.9E-13 8.5E-18 113.6 32.8 228 18-251 124-391 (445)
51 1qks_A Cytochrome CD1 nitrite 99.7 3.3E-13 1.4E-17 111.9 34.0 197 22-222 166-382 (567)
52 1l0q_A Surface layer protein; 99.7 4.1E-13 1.8E-17 111.2 33.7 196 17-222 37-242 (391)
53 3jro_A Fusion protein of prote 99.7 1.8E-14 8.2E-19 121.0 26.1 191 20-212 64-284 (753)
54 1jmx_B Amine dehydrogenase; ox 99.7 3.6E-14 1.6E-18 118.9 27.5 223 16-246 4-310 (349)
55 2zkq_a 40S ribosomal protein R 99.7 7.6E-14 3.4E-18 116.5 28.7 237 17-280 69-315 (317)
56 3ei3_B DNA damage-binding prot 99.7 4.5E-14 2E-18 118.2 27.1 195 23-221 131-347 (383)
57 1nir_A Nitrite reductase; hemo 99.7 3.8E-14 1.7E-18 118.7 26.6 199 21-221 147-363 (543)
58 1nex_B CDC4 protein, SCCDC4; W 99.7 8.5E-15 3.8E-19 123.4 23.2 221 21-252 171-422 (464)
59 2pbi_B Guanine nucleotide-bind 99.7 6.3E-14 2.8E-18 117.1 27.5 199 19-224 114-326 (354)
60 2pm9_A Protein WEB1, protein t 99.7 7.6E-15 3.4E-19 123.8 22.5 234 17-251 73-337 (416)
61 3i2n_A WD repeat-containing pr 99.7 6.6E-14 2.9E-18 117.0 27.3 232 18-250 25-290 (357)
62 3fm0_A Protein CIAO1; WDR39,SG 99.7 2E-13 8.9E-18 113.4 29.7 203 42-248 4-222 (345)
63 2pm7_B Protein transport prote 99.7 3.2E-14 1.4E-18 119.2 24.8 243 16-285 14-291 (297)
64 3bg1_A Protein SEC13 homolog; 99.7 4.9E-14 2.2E-18 117.9 24.4 224 16-248 18-280 (316)
65 2vdu_B TRNA (guanine-N(7)-)-me 99.7 5.8E-14 2.6E-18 117.3 24.4 166 55-223 103-281 (450)
66 3jrp_A Fusion protein of prote 99.7 8.9E-13 4E-17 108.7 30.3 191 20-212 66-286 (379)
67 3f3f_A Nucleoporin SEH1; struc 99.7 3.4E-13 1.5E-17 111.7 27.0 199 17-216 17-252 (351)
68 3dwl_C Actin-related protein 2 99.7 5E-15 2.2E-19 125.1 17.5 197 17-215 61-283 (377)
69 1sq9_A Antiviral protein SKI8; 99.7 1.7E-13 7.8E-18 113.8 25.3 236 23-260 26-321 (397)
70 3frx_A Guanine nucleotide-bind 99.7 6.2E-12 2.8E-16 102.5 32.4 235 17-279 71-317 (319)
71 2vdu_B TRNA (guanine-N(7)-)-me 99.7 6.6E-14 2.9E-18 116.9 22.3 192 17-214 108-340 (450)
72 3gre_A Serine/threonine-protei 99.7 2.2E-13 9.7E-18 113.1 24.8 181 41-222 50-254 (437)
73 1pby_B Quinohemoprotein amine 99.7 1.2E-12 5.4E-17 107.7 28.3 163 23-194 1-185 (337)
74 1pby_B Quinohemoprotein amine 99.7 1.4E-12 6.4E-17 107.2 28.0 213 16-247 38-296 (337)
75 3i2n_A WD repeat-containing pr 99.7 5E-13 2.2E-17 110.5 25.3 193 16-216 73-294 (357)
76 2ovr_B FBW7, F-BOX/WD repeat p 99.6 5.6E-12 2.5E-16 102.9 30.0 212 23-248 169-425 (445)
77 1yfq_A Cell cycle arrest prote 99.6 2E-12 8.8E-17 106.1 27.5 157 16-172 16-178 (342)
78 3llp_A Fascin; beta-trefoil, a 99.6 2.8E-14 1.3E-18 119.6 17.7 197 20-223 64-299 (493)
79 3bg1_A Protein SEC13 homolog; 99.6 4.7E-13 2.1E-17 110.7 23.4 241 45-289 4-303 (316)
80 3gfc_A Histone-binding protein 99.6 1.2E-12 5.2E-17 107.8 23.6 184 24-214 138-350 (425)
81 1nir_A Nitrite reductase; hemo 99.6 2.5E-11 1.1E-15 98.1 29.6 258 17-275 184-494 (543)
82 3gfc_A Histone-binding protein 99.6 2.7E-12 1.2E-16 105.2 22.8 202 48-249 118-347 (425)
83 2j04_B YDR362CP, TAU91; beta p 99.6 6.3E-13 2.8E-17 109.8 18.4 190 21-214 223-429 (524)
84 2pm9_A Protein WEB1, protein t 99.6 3.2E-13 1.4E-17 111.9 16.9 262 20-281 21-339 (416)
85 1k32_A Tricorn protease; prote 99.6 4.5E-11 2E-15 96.3 27.4 160 33-202 317-491 (1045)
86 2pm7_B Protein transport prote 99.6 2.5E-12 1.1E-16 105.4 20.9 229 49-281 4-276 (297)
87 3hxj_A Pyrrolo-quinoline quino 99.6 1.2E-12 5.1E-17 107.9 19.0 245 23-283 30-296 (330)
88 1ri6_A Putative isomerase YBHE 99.5 5.5E-10 2.4E-14 88.3 32.1 187 21-211 3-207 (343)
89 1qks_A Cytochrome CD1 nitrite 99.5 3.3E-10 1.5E-14 89.9 30.6 200 17-223 202-438 (567)
90 2j04_B YDR362CP, TAU91; beta p 99.5 6.6E-14 2.9E-18 116.9 11.4 223 21-250 171-427 (524)
91 3llp_A Fascin; beta-trefoil, a 99.5 1.5E-12 6.5E-17 107.1 17.3 188 17-215 102-333 (493)
92 3f3f_A Nucleoporin SEH1; struc 99.5 2.5E-11 1.1E-15 98.1 22.9 201 48-248 5-246 (351)
93 2mad_H Methylamine dehydrogena 99.5 4.9E-09 2.2E-13 81.4 33.8 186 17-216 26-246 (373)
94 2oit_A Nucleoporin 214KDA; NH2 99.5 8.2E-11 3.6E-15 94.4 24.5 179 19-205 44-263 (434)
95 2bbk_H Methylamine dehydrogena 99.5 8E-11 3.5E-15 94.4 24.4 150 18-170 8-185 (355)
96 2oiz_A Aromatic amine dehydrog 99.5 5.3E-10 2.4E-14 88.4 28.6 146 17-172 9-181 (361)
97 1p22_A F-BOX/WD-repeat protein 99.5 2.2E-10 9.9E-15 91.2 26.4 216 21-249 181-412 (435)
98 2ad6_A Methanol dehydrogenase 99.5 5.6E-10 2.5E-14 88.3 28.3 197 23-221 62-343 (571)
99 3c75_H MADH, methylamine dehyd 99.5 2.4E-10 1.1E-14 90.9 25.5 234 17-260 78-401 (426)
100 3c75_H MADH, methylamine dehyd 99.5 1.1E-10 4.8E-15 93.5 23.5 206 17-222 123-411 (426)
101 2ojh_A Uncharacterized protein 99.5 6.7E-10 3E-14 87.7 27.4 213 18-247 4-233 (297)
102 1q7f_A NHL, brain tumor CG1071 99.5 1.4E-09 6.1E-14 85.4 28.7 219 19-248 37-268 (286)
103 2mad_H Methylamine dehydrogena 99.5 5E-09 2.2E-13 81.3 31.5 230 15-256 69-345 (373)
104 3hxj_A Pyrrolo-quinoline quino 99.5 5E-10 2.2E-14 88.6 26.1 205 23-248 107-312 (330)
105 2oit_A Nucleoporin 214KDA; NH2 99.5 1.2E-11 5.2E-16 100.5 17.7 151 16-167 97-265 (434)
106 1q7f_A NHL, brain tumor CG1071 99.5 5.5E-09 2.4E-13 81.0 31.0 202 40-251 8-227 (286)
107 1k32_A Tricorn protease; prote 99.4 3E-09 1.4E-13 82.9 29.5 79 145-223 338-419 (1045)
108 1w6s_A Methanol dehydrogenase 99.4 6.1E-09 2.7E-13 80.7 30.5 199 23-221 63-350 (599)
109 2oiz_A Aromatic amine dehydrog 99.4 2.3E-09 1E-13 83.7 27.9 255 15-278 53-354 (361)
110 1yfq_A Cell cycle arrest prote 99.4 1.6E-10 7.2E-15 92.2 21.8 196 23-221 69-290 (342)
111 1flg_A Protein (quinoprotein e 99.4 6.3E-09 2.8E-13 80.6 29.2 198 23-221 68-363 (582)
112 1mda_H Methylamine dehydrogena 99.4 1.2E-10 5.3E-15 93.2 20.4 116 18-136 26-166 (368)
113 2qc5_A Streptogramin B lactona 99.4 3.5E-08 1.5E-12 75.2 35.1 253 18-286 26-296 (300)
114 3hfq_A Uncharacterized protein 99.4 3.6E-08 1.6E-12 75.1 33.6 63 18-81 46-115 (347)
115 3dsm_A Uncharacterized protein 99.4 5.2E-09 2.3E-13 81.2 28.0 243 23-286 54-317 (328)
116 1flg_A Protein (quinoprotein e 99.4 4.1E-08 1.8E-12 74.7 32.5 241 23-280 117-526 (582)
117 1ri6_A Putative isomerase YBHE 99.4 2E-09 9E-14 84.2 25.6 233 15-254 41-301 (343)
118 1rwi_B Serine/threonine-protei 99.4 2.1E-09 9.4E-14 84.0 25.5 224 18-254 30-257 (270)
119 2hz6_A Endoplasmic reticulum t 99.4 6.7E-13 3E-17 109.6 7.5 194 18-223 4-202 (369)
120 3hfq_A Uncharacterized protein 99.4 2.2E-08 9.7E-13 76.7 30.3 244 35-278 20-304 (347)
121 1kv9_A Type II quinohemoprotei 99.4 1.2E-08 5.5E-13 78.5 28.8 199 23-221 66-341 (668)
122 1kv9_A Type II quinohemoprotei 99.4 3.2E-08 1.4E-12 75.5 30.7 243 23-282 117-500 (668)
123 3dsm_A Uncharacterized protein 99.4 1.5E-08 6.5E-13 77.9 29.0 242 30-276 14-283 (328)
124 3elq_A Arylsulfate sulfotransf 99.4 9.6E-09 4.3E-13 79.2 27.7 245 33-278 175-548 (571)
125 2dg1_A DRP35, lactonase; beta 99.4 6E-08 2.7E-12 73.5 32.3 238 21-270 54-315 (333)
126 3fvz_A Peptidyl-glycine alpha- 99.4 4.7E-09 2.1E-13 81.5 25.8 215 32-249 68-310 (329)
127 2hqs_A Protein TOLB; TOLB, PAL 99.3 7.6E-08 3.4E-12 72.7 31.4 238 18-280 139-396 (415)
128 2dg1_A DRP35, lactonase; beta 99.3 3.9E-08 1.7E-12 74.8 27.7 214 52-278 42-270 (333)
129 1kb0_A Quinohemoprotein alcoho 99.3 1.2E-07 5.3E-12 71.3 29.7 197 23-221 77-354 (677)
130 1rwi_B Serine/threonine-protei 99.3 4E-09 1.8E-13 82.1 21.6 237 41-290 9-264 (270)
131 1w6s_A Methanol dehydrogenase 99.3 1.1E-07 4.8E-12 71.6 28.6 243 22-281 120-514 (599)
132 1yiq_A Quinohemoprotein alcoho 99.3 2E-07 8.9E-12 69.6 31.0 198 23-221 70-346 (689)
133 2p4o_A Hypothetical protein; Z 99.3 6.7E-08 3E-12 73.1 26.7 126 41-175 20-149 (306)
134 2ad6_A Methanol dehydrogenase 99.2 9.8E-09 4.4E-13 79.2 22.2 243 23-282 115-506 (571)
135 3fgb_A Uncharacterized protein 99.2 1.9E-07 8.4E-12 69.8 28.6 252 24-277 6-315 (361)
136 1yiq_A Quinohemoprotein alcoho 99.2 1.1E-07 4.8E-12 71.6 27.2 68 23-90 121-200 (689)
137 1jmx_B Amine dehydrogenase; ox 99.2 2.1E-09 9.3E-14 84.1 18.1 205 16-223 47-335 (349)
138 2qc5_A Streptogramin B lactona 99.2 3.4E-07 1.5E-11 68.0 31.6 185 21-212 71-259 (300)
139 1mda_H Methylamine dehydrogena 99.2 1.3E-07 6E-12 70.9 26.4 143 15-160 68-229 (368)
140 3fvz_A Peptidyl-glycine alpha- 99.2 1.4E-07 6.1E-12 70.8 26.2 220 73-294 68-326 (329)
141 2hqs_A Protein TOLB; TOLB, PAL 99.2 1.4E-07 6.4E-12 70.7 26.0 246 24-278 76-373 (415)
142 1kb0_A Quinohemoprotein alcoho 99.2 7.9E-08 3.5E-12 72.6 24.6 158 23-180 128-354 (677)
143 3fgb_A Uncharacterized protein 99.2 3.9E-07 1.7E-11 67.5 27.4 234 15-254 45-322 (361)
144 2ojh_A Uncharacterized protein 99.2 8.4E-08 3.7E-12 72.4 23.5 216 18-247 48-288 (297)
145 2bbk_H Methylamine dehydrogena 99.1 2.5E-07 1.1E-11 68.9 25.0 226 16-251 51-322 (355)
146 2fp8_A Strictosidine synthase; 99.1 1.6E-07 6.9E-12 70.4 23.0 49 164-212 165-215 (322)
147 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1E-06 4.6E-11 64.4 30.4 216 20-248 26-286 (314)
148 1tl2_A L10, protein (tachylect 99.1 2.7E-11 1.2E-15 97.9 3.4 203 23-248 3-226 (236)
149 1tl2_A L10, protein (tachylect 99.1 1.1E-10 4.8E-15 93.5 6.2 174 17-204 46-230 (236)
150 3hrp_A Uncharacterized protein 99.1 1.4E-06 6.4E-11 63.4 30.1 194 22-218 141-359 (409)
151 2z2n_A Virginiamycin B lyase; 99.1 1.5E-06 6.9E-11 63.2 35.5 254 19-288 22-293 (299)
152 2iwa_A Glutamine cyclotransfer 99.0 4.6E-07 2E-11 67.0 22.6 200 43-252 9-228 (266)
153 2be1_A Serine/threonine-protei 99.0 1.1E-08 4.7E-13 79.0 13.7 200 23-223 10-241 (339)
154 2p4o_A Hypothetical protein; Z 99.0 2.8E-06 1.3E-10 61.3 27.0 244 17-268 37-297 (306)
155 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 8.9E-07 4E-11 64.9 23.0 229 56-287 19-296 (314)
156 2qe8_A Uncharacterized protein 99.0 2.7E-06 1.2E-10 61.4 25.2 231 16-252 21-312 (343)
157 2iwa_A Glutamine cyclotransfer 99.0 8.8E-07 3.9E-11 64.9 22.3 181 14-201 20-224 (266)
158 3g4e_A Regucalcin; six bladed 99.0 3.7E-06 1.6E-10 60.4 28.6 211 22-248 24-260 (297)
159 2ghs_A AGR_C_1268P; 15155668, 98.9 4.5E-06 2E-10 59.7 27.5 210 22-248 60-290 (326)
160 1jof_A Carboxy-CIS,CIS-muconat 98.9 5.5E-06 2.4E-10 59.1 27.1 228 22-249 1-274 (365)
161 2hz6_A Endoplasmic reticulum t 98.9 2.9E-09 1.3E-13 83.0 7.3 184 22-215 48-238 (369)
162 2z2n_A Virginiamycin B lyase; 98.9 7.1E-06 3.1E-10 58.3 31.5 228 46-286 5-251 (299)
163 1jof_A Carboxy-CIS,CIS-muconat 98.9 6.8E-06 3E-10 58.5 23.8 234 15-252 43-332 (365)
164 3e5z_A Putative gluconolactona 98.9 7.8E-06 3.5E-10 58.0 25.3 187 23-222 40-254 (296)
165 2p9w_A MAL S 1 allergenic prot 98.9 3.2E-06 1.4E-10 60.8 22.0 227 20-248 22-302 (334)
166 3e5z_A Putative gluconolactona 98.8 1.2E-05 5.2E-10 56.8 26.5 205 59-282 32-257 (296)
167 2gop_A Trilobed protease; beta 98.8 1.4E-05 6.1E-10 56.2 25.4 237 31-286 41-326 (347)
168 3c5m_A Oligogalacturonate lyas 98.8 1.6E-05 7E-10 55.8 27.5 198 16-221 40-281 (396)
169 3c5m_A Oligogalacturonate lyas 98.7 2.1E-05 9.3E-10 54.9 23.5 174 38-216 15-228 (396)
170 3hrp_A Uncharacterized protein 98.7 2.3E-05 1E-09 54.6 26.7 227 57-287 133-407 (409)
171 2ghs_A AGR_C_1268P; 15155668, 98.7 2.2E-05 9.7E-10 54.8 22.1 199 60-278 54-267 (326)
172 2qe8_A Uncharacterized protein 98.7 3.6E-05 1.6E-09 53.2 26.1 221 55-275 17-306 (343)
173 3dr2_A Exported gluconolactona 98.6 5.7E-05 2.5E-09 51.7 23.1 188 22-222 56-275 (305)
174 3g4e_A Regucalcin; six bladed 98.5 7.8E-05 3.5E-09 50.7 27.8 202 58-279 16-238 (297)
175 2be1_A Serine/threonine-protei 98.5 7.2E-07 3.2E-11 65.6 9.2 17 261-277 221-238 (339)
176 1k3i_A Galactose oxidase precu 98.5 0.00011 4.9E-09 49.7 22.1 92 34-126 220-324 (656)
177 3dr2_A Exported gluconolactona 98.4 0.00013 5.8E-09 49.1 24.9 202 59-280 49-276 (305)
178 1xfd_A Dipeptidyl aminopeptida 98.4 8.9E-06 4E-10 57.6 13.3 133 30-163 34-193 (723)
179 2fp8_A Strictosidine synthase; 98.4 0.00014 6.3E-09 48.8 26.8 220 18-249 25-301 (322)
180 2z3z_A Dipeptidyl aminopeptida 98.3 0.00032 1.4E-08 46.2 26.9 189 24-218 92-349 (706)
181 2ecf_A Dipeptidyl peptidase IV 98.2 0.00039 1.7E-08 45.6 27.5 161 1-162 1-228 (741)
182 1ijq_A LDL receptor, low-densi 98.2 0.00043 1.9E-08 45.3 26.5 176 33-215 10-197 (316)
183 3elq_A Arylsulfate sulfotransf 98.2 0.00045 2E-08 45.2 23.6 198 75-280 176-491 (571)
184 1qni_A Nitrous-oxide reductase 98.2 0.00049 2.2E-08 44.9 26.6 252 16-277 85-430 (581)
185 1k3i_A Galactose oxidase precu 98.2 0.0005 2.2E-08 44.8 17.8 232 14-250 245-530 (656)
186 1z68_A Fibroblast activation p 98.1 7.4E-05 3.3E-09 50.9 12.8 137 22-162 25-188 (719)
187 2p9w_A MAL S 1 allergenic prot 98.1 2.3E-05 1E-09 54.6 10.1 161 55-215 13-217 (334)
188 1xfd_A Dipeptidyl aminopeptida 98.0 0.00076 3.4E-08 43.5 15.9 101 16-116 65-194 (723)
189 1ijq_A LDL receptor, low-densi 98.0 0.00098 4.4E-08 42.7 27.0 192 22-219 41-244 (316)
190 1npe_A Nidogen, entactin; glyc 98.0 0.0011 5E-08 42.2 27.8 155 57-216 38-201 (267)
191 1orv_A Dipeptidyl peptidase IV 97.9 0.00057 2.5E-08 44.4 14.1 137 21-162 26-190 (728)
192 3kya_A Putative phosphatase; s 97.8 0.002 8.9E-08 40.4 21.1 25 192-217 389-413 (496)
193 3kya_A Putative phosphatase; s 97.7 0.0024 1.1E-07 39.8 20.2 229 58-288 142-473 (496)
194 1orv_A Dipeptidyl peptidase IV 97.7 0.0017 7.6E-08 40.9 14.1 97 18-116 68-192 (728)
195 1z68_A Fibroblast activation p 97.7 0.0013 5.9E-08 41.7 13.0 98 17-116 65-190 (719)
196 1qni_A Nitrous-oxide reductase 97.6 0.0039 1.7E-07 38.3 22.3 185 21-212 17-297 (581)
197 2gop_A Trilobed protease; beta 97.6 0.004 1.8E-07 38.3 23.8 186 17-218 64-296 (347)
198 2hu5_A Acylamino-acid-releasin 97.4 0.0077 3.4E-07 36.2 17.4 183 23-218 34-232 (582)
199 2ecf_A Dipeptidyl peptidase IV 97.1 0.014 6E-07 34.4 18.1 67 20-87 117-185 (741)
200 2z3z_A Dipeptidyl aminopeptida 97.0 0.016 7.1E-07 33.9 26.0 48 72-121 99-146 (706)
201 2w18_A PALB2, fancn, partner a 96.9 0.021 9.5E-07 32.9 18.6 26 196-221 195-220 (356)
202 1npe_A Nidogen, entactin; glyc 96.9 0.021 9.5E-07 32.9 26.7 194 21-221 46-246 (267)
203 3ei3_A DNA damage-binding prot 96.7 0.029 1.3E-06 32.0 29.0 103 20-122 568-679 (1158)
204 2ism_A Putative oxidoreductase 96.4 0.045 2E-06 30.6 13.7 24 57-80 33-57 (352)
205 3das_A Putative oxidoreductase 96.3 0.047 2.1E-06 30.4 16.5 26 21-46 41-66 (347)
206 2hu5_A Acylamino-acid-releasin 95.7 0.084 3.7E-06 28.6 25.6 165 33-207 90-270 (582)
207 1n7d_A LDL receptor, low-densi 95.4 0.11 4.9E-06 27.7 15.6 48 34-83 387-437 (699)
208 1n7d_A LDL receptor, low-densi 95.3 0.12 5.2E-06 27.6 13.7 159 57-221 455-622 (699)
209 3gc3_B Arrestin beta-1, clathr 95.0 0.15 6.5E-06 26.9 28.6 39 183-221 259-297 (363)
210 2ece_A 462AA long hypothetical 94.9 0.15 6.7E-06 26.7 19.6 30 33-62 43-78 (462)
211 1bpo_A Protein (clathrin); cla 94.8 0.16 7E-06 26.6 26.0 39 183-221 259-297 (494)
212 3ei3_A DNA damage-binding prot 94.0 0.23 1E-05 25.3 30.6 17 23-39 617-633 (1158)
213 1xi4_A Clathrin heavy chain; a 93.4 0.3 1.3E-05 24.6 18.0 46 182-227 258-303 (1630)
214 2j04_A TAU60, YPL007P, hypothe 92.5 0.39 1.7E-05 23.7 17.7 118 95-219 130-260 (588)
215 3hx6_A Type 4 fimbrial biogene 92.4 0.39 1.8E-05 23.7 17.9 151 21-172 83-283 (570)
216 1h2w_A Prolyl endopeptidase; h 92.4 0.4 1.8E-05 23.6 9.5 14 205-218 360-373 (710)
217 1v04_A Serum paraoxonase/aryle 91.0 0.55 2.4E-05 22.7 20.7 184 56-248 51-284 (355)
218 1cru_A Protein (soluble quinop 90.1 0.65 2.9E-05 22.1 20.1 47 19-65 34-87 (454)
219 3ii7_A Kelch-like protein 7; p 89.8 0.69 3.1E-05 21.9 25.4 236 19-276 9-276 (306)
220 1qxm_A HA1; hemagglutinin, tre 88.8 0.8 3.6E-05 21.5 17.8 164 16-180 30-203 (300)
221 2e31_A FBS1, F-box only protei 86.3 0.36 1.6E-05 23.9 2.7 42 191-232 229-270 (297)
222 1b2p_A Protein (lectin); manno 85.4 1.2 5.4E-05 20.1 11.9 14 166-179 73-86 (119)
223 1dlp_A Lectin scafet precursor 83.5 1.5 6.5E-05 19.6 10.8 74 27-111 30-103 (236)
224 2dpf_A Curculin; sweet taste, 82.3 1.6 7.2E-05 19.2 11.0 17 163-179 60-76 (115)
225 2zwa_A Leucine carboxyl methyl 81.2 1.8 7.8E-05 19.0 15.5 224 21-248 396-672 (695)
226 3h6j_A Neuraminidase, sialidas 79.8 1.9 8.7E-05 18.6 9.7 159 17-179 27-221 (438)
227 2bkl_A Prolyl endopeptidase; m 79.4 2 8.9E-05 18.6 15.4 12 205-216 343-354 (695)
228 3dzw_A Agglutinin; lectin, man 78.7 2.1 9.3E-05 18.4 9.6 11 168-178 64-74 (109)
229 2uvk_A YJHT; unknown function, 77.8 2.2 9.9E-05 18.2 19.2 91 22-113 19-126 (357)
230 2wg3_C Hedgehog-interacting pr 76.1 2.4 0.00011 17.9 11.3 97 17-114 19-158 (463)
231 1h6l_A 3-phytase; hydrolase, p 76.0 2.5 0.00011 17.9 22.2 189 22-221 39-272 (353)
232 1kj1_A Lectin I, lecgna 1; BUL 68.7 3.5 0.00016 16.7 10.6 11 168-178 65-75 (109)
233 1vc3_B L-aspartate-alpha-decar 62.2 4.6 0.00021 15.9 3.8 71 204-274 18-91 (96)
234 1yr2_A Prolyl oligopeptidase; 62.1 4.7 0.00021 15.9 19.3 50 19-70 170-224 (741)
235 1pqh_A Aspartate 1-decarboxyla 57.2 5.6 0.00025 15.3 3.5 72 202-273 57-131 (143)
236 2c45_A Aspartate 1-decarboxyla 56.3 4.2 0.00019 16.2 1.9 72 203-274 41-115 (139)
237 1sqj_A OXG-RCBH, oligoxylogluc 54.0 6.3 0.00028 14.9 16.4 130 19-153 24-179 (789)
238 2g8s_A Glucose/sorbosone dehyd 54.0 6.3 0.00028 14.9 7.7 25 20-44 26-50 (353)
239 1xd5_A Gastrodianin-1, antifun 53.5 6.4 0.00028 14.9 11.6 12 166-177 93-104 (112)
240 1uhe_A Aspartate 1-decarboxyla 44.2 8.7 0.00039 13.9 4.8 71 204-274 17-89 (97)
241 2w7q_A Outer-membrane lipoprot 40.5 9.9 0.00044 13.5 4.4 37 42-90 64-100 (204)
242 2jxw_A WW domain-binding prote 39.7 10 0.00045 13.4 3.9 19 32-50 14-32 (75)
243 2zuy_A YESX protein; beta-prop 39.3 10 0.00046 13.4 17.4 74 145-223 332-414 (620)
244 2hc5_A ORF 99, hypothetical pr 39.2 10 0.00046 13.3 3.0 18 33-50 69-86 (117)
245 3hun_A Penicillin-binding prot 33.9 12 0.00055 12.8 2.3 26 34-59 72-97 (453)
246 1e0l_A Formin binding protein; 33.8 12 0.00054 12.8 1.3 19 32-50 15-33 (37)
247 1zi0_A DNA gyrase subunit A; b 31.4 14 0.0006 12.5 18.7 191 21-211 1-224 (307)
248 3f7f_A Nucleoporin NUP120; nuc 29.8 14 0.00064 12.3 8.8 20 153-172 230-249 (729)
249 3hbr_A OXA-48; class D beta-la 28.8 15 0.00066 12.2 2.2 46 1-46 1-55 (265)
250 1xip_A Nucleoporin NUP159; bet 25.7 17 0.00075 11.8 18.9 35 45-83 81-115 (388)
251 1mke_A WIP - N-WAsp, fusion pr 25.3 17 0.00076 11.8 3.3 12 207-218 81-92 (152)
252 3dw0_A Class A carbapenemase K 21.5 20 0.00089 11.2 1.2 15 35-50 46-60 (294)
253 2dk7_A Transcription elongatio 21.3 20 0.0009 11.2 3.7 35 187-221 13-47 (73)
254 2bcf_A Probable D-alanyl-D-ala 21.1 20 0.00091 11.2 3.6 29 32-60 19-47 (276)
255 2ifs_A N-WAsp, wiskott-aldrich 20.1 21 0.00095 11.0 2.8 15 206-220 97-111 (169)
256 2woz_A Kelch repeat and BTB do 20.0 21 0.00095 11.0 26.1 208 25-249 18-261 (318)
No 1
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=1.1e-20 Score=166.29 Aligned_cols=228 Identities=12% Similarity=0.062 Sum_probs=176.6
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCE---EEEEEE-CCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCC--CEE
Q ss_conf 00147888589997479869999887882---999994-4998731164790798399841--882899752677--036
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKE---IVWEYP-LEKGWECNSVAATKAGEILFSY--SKGAKMITRDGR--ELW 87 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~---~~w~~~-~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~--~~~ 87 (294)
.++.+++.+++++|+ ++.|++||..+++ .+.... .+|...+.+++++|||++|+++ |+.+++|+.... ...
T Consensus 56 ~~~~s~~~~~~~~g~-dg~v~~wd~~~~~~~~~~~~~~~~~h~~~V~~~~~spdg~~l~sg~~d~~v~lwd~~~~~~~~~ 134 (337)
T 1gxr_A 56 AVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIK 134 (337)
T ss_dssp EEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEE
T ss_pred EEEECCCCCEEEEEC-CCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCEEE
T ss_conf 999948998999969-9989999898999983189777379989889999949999999997999399986128984499
Q ss_pred EEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEE
Q ss_conf 77237776314878737875899970589799998568958899970677677667400899969989999974698899
Q T0558 88 NIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVR 167 (294)
Q Consensus 88 ~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~ 167 (294)
....++...+.+++|+|+++++++++.++.+.+|+..+++.++.+. .+...+.++.++||++++++++.|+.++
T Consensus 135 ~~~~~h~~~i~~i~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 208 (337)
T 1gxr_A 135 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ------GHTDGASCIDISNDGTKLWTGGLDNTVR 208 (337)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEECCCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEEC------CCCCCEEEEEEECCCCCCEEECCCCCEE
T ss_conf 9973789998999998999999999799979996056615877713------7899879999916898102221676528
Q ss_pred EEECC-CCEEEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCC--EEE--CCCC
Q ss_conf 99378-858898516973489887348968997358987999987898599984488764114113453--489--3899
Q T0558 168 EIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ--LFP--LQNG 242 (294)
Q Consensus 168 ~~d~~-g~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~--~~~--~~~G 242 (294)
+||.. ++.+........+.++.++|+++.+++++.++.+.+||.++++... +..+......+.+.+. ... ..||
T Consensus 209 i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~-~~~h~~~v~~v~~s~dg~~l~s~s~d~ 287 (337)
T 1gxr_A 209 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-ECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEECCCCEEEEEEEEEEEEEEEEEEECCCCEEECCCCEEEEEECCCCCEEE-EECCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 9993588588885100157664564201110633599969999999996888-725788567999989999999994989
Q ss_pred CEEEEECCC
Q ss_conf 899980467
Q T0558 243 GLYICNWQG 251 (294)
Q Consensus 243 ~i~i~~~~~ 251 (294)
.+.+|+...
T Consensus 288 ~i~iwd~~~ 296 (337)
T 1gxr_A 288 LLNAWRTPY 296 (337)
T ss_dssp EEEEEETTT
T ss_pred EEEEEECCC
T ss_conf 499999999
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.92 E-value=5.4e-20 Score=161.39 Aligned_cols=201 Identities=8% Similarity=0.047 Sum_probs=154.7
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEE-CCCCCCCCEEEEECCCCEEEEE----CCEEEEEECCCCCEEEEE
Q ss_conf 00147888589997479869999887882999994-4998731164790798399841----882899752677036772
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYP-LEKGWECNSVAATKAGEILFSY----SKGAKMITRDGRELWNIA 90 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~-~~~~~~~~~~~~~pdG~~l~s~----~~~v~~~~~~~~~~~~~~ 90 (294)
.++.|+++++|++|+.|++|++||..+++.+.+.. .+|...+.+++|+|||++|++. +..+++|+.+.+......
T Consensus 64 ~~~fSpdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~~~h~~~V~~l~fs~d~~~l~s~~~~~~~~~~v~~~~~g~~~~~l 143 (611)
T 1nr0_A 64 VAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNL 143 (611)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCC
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 99999999999999289949999899996788999647899888999989989999999698987999999899788999
Q ss_pred CCCCCCEEEEEECCCCCE-EEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 377763148787378758-9997058979999856895889997067767766740089996998999997469889999
Q T0558 91 APAGCEMQTARILPDGNA-LVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 169 (294)
Q Consensus 91 ~~~~~~v~~~~~~~dg~~-l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~ 169 (294)
.+|...+.++.|+|++.+ +++++.|+.+.+|+..+++...... .|...+.++.++|||+++++++.++.|++|
T Consensus 144 ~gh~~~V~~v~f~p~~~~~l~sgs~D~~v~vwd~~~~~~~~~~~------~h~~~V~~~~~s~~g~~l~s~~~~g~i~vw 217 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG------EHTKFVHSVRYNPDGSLFASTGGDGTIVLY 217 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ECCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCCEEEEEC------CCCCCEEEEEECCCCCEEEEECCCCCEEEE
T ss_conf 67899888999978999599999689837888505881888854------888867877766999745653056633787
Q ss_pred ECC-CCEEEEEE--------CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECC
Q ss_conf 378-85889851--------697348988734896899735898799998789859998448
Q T0558 170 APN-GQLLNSVK--------LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA 222 (294)
Q Consensus 170 d~~-g~~~~~~~--------~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~ 222 (294)
|.. ........ +...+.++.++++++++++++.|+.+.+||.++++....+..
T Consensus 218 d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 279 (611)
T 1nr0_A 218 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV 279 (611)
T ss_dssp ETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred ECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCCEEEEEC
T ss_conf 14667301121000101467567567456516886674420576421687212541000001
No 3
>3acp_A WD40 protein, WD repeat-containing protein YGL004C; WD40 domain, chaperone; 2.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.6e-21 Score=172.50 Aligned_cols=231 Identities=10% Similarity=0.000 Sum_probs=178.5
Q ss_pred CCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCC
Q ss_conf 1478885899974798699998878829999944998731164790798399841--88289975267703677237776
Q T0558 18 QGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGC 95 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~ 95 (294)
..+.++++|++|+.|++|++||.++++++..+. +|...+.+++|+|||++|+++ |+.+++|+...+.......+|..
T Consensus 101 ~~~~~~~~l~~G~~dg~i~i~d~~~~~~~~~~~-~H~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~l~gH~~ 179 (417)
T 3acp_A 101 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ-AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA 179 (417)
T ss_dssp EEESSSEEEEEEETTSCEEEEETTCCEEEEETT-SSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCCCEEECCCSS
T ss_pred EECCCCCEEEEEECCCEEEEEECCCCCEEEEEC-CCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCC
T ss_conf 998999999999688979999999993999974-6588679999968989999994899399999999969999848888
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCC------------------CCCCCCCEEEECCCCCEE
Q ss_conf 31487873787589997058979999856895889997067767------------------766740089996998999
Q T0558 96 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIE------------------RPHAQFRQINKNKKGNYL 157 (294)
Q Consensus 96 ~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~------------------~~~~~~~~~~~s~dG~~i 157 (294)
.+.+++|+|+++++++++.|+.+.+|+..++++++.+....... .+...+.++.++|+|+++
T Consensus 180 ~V~~v~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 259 (417)
T 3acp_A 180 TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV 259 (417)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCTTCTTSCEEEEEEEESCCCCTTTSSSCCCCTTCSSCTTEEE
T ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCEE
T ss_conf 67899997899999996078745888878893779981467752012100111001110232035653069984043099
Q ss_pred EEEECCCEEEEEECC-CCEEEEEE--CCCEEEEEEEE-CCCCEEEECCCCCEEEEEECCCCEE--EEEECCCCCCCEEEC
Q ss_conf 997469889999378-85889851--69734898873-4896899735898799998789859--998448876411411
Q T0558 158 VPLFATSEVREIAPN-GQLLNSVK--LSGTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRI--VRRVNANDIEGVQLF 231 (294)
Q Consensus 158 ~~g~~d~~i~~~d~~-g~~~~~~~--~~~~~~~~~~~-~~g~~~v~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~ 231 (294)
++++.|+.+++||.. +....... ....+..+.+. +++.++++++.++.|++||.++++. .....++......+.
T Consensus 260 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~sg~~dg~i~iwd~~s~~~~~~~~~~~~~~~V~~v~ 339 (417)
T 3acp_A 260 IAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY 339 (417)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTSTTSCSEEEESSTTSCEEEEE
T ss_pred EEEECCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCEEEEEEECCCCCCEEEEE
T ss_conf 99925884677625554421011000012331001221122331454669989999999996256778527999789999
Q ss_pred CCCCEEE---CCCCCEEEEEC
Q ss_conf 3453489---38998999804
Q T0558 232 FVAQLFP---LQNGGLYICNW 249 (294)
Q Consensus 232 ~~~~~~~---~~~G~i~i~~~ 249 (294)
+.++-.+ ..||.+.+|..
T Consensus 340 ~s~~~~l~s~s~D~~i~iw~~ 360 (417)
T 3acp_A 340 FAAGALFVSSGFDTSIKLDII 360 (417)
T ss_dssp EETTEEEEEETTTEEEEEEEE
T ss_pred ECCCCEEEEEECCCEEEEEEC
T ss_conf 889999999948995999988
No 4
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=7.3e-20 Score=160.40 Aligned_cols=228 Identities=13% Similarity=0.065 Sum_probs=182.0
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCE--EEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECC
Q ss_conf 0147888589997479869999887882--9999944998731164790798399841--88289975267703677237
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKE--IVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAP 92 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~--~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~ 92 (294)
.+.++++++|++|+.|+.|.+||..+++ ...+.. +|...+.+++++|||++++++ ++.+++|+.......+...+
T Consensus 103 ~~~spdg~~l~sg~~d~~v~lwd~~~~~~~~~~~~~-~h~~~i~~i~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 181 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp EEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEECCCCCEEEEEECCCEEEEEEECCCCCEEEEEEC-CCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECC
T ss_conf 999499999999979993999861289844999973-7899989999989999999997999799960566158777137
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC
Q ss_conf 77631487873787589997058979999856895889997067767766740089996998999997469889999378
Q T0558 93 AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 172 (294)
Q Consensus 93 ~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~ 172 (294)
+...+.+++++|+++++++++.|+.+.+|+..+|+.++.+. +...+.++.++|+|+++++++.|+.|++||..
T Consensus 182 ~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~v~i~d~~ 254 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-------FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCCEEEEEE-------EEEEEEEEEEEEECCCCEEECCCCEEEEEECC
T ss_conf 89987999991689810222167652899935885888851-------00157664564201110633599969999999
Q ss_pred CCEEEEE-ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCC
Q ss_conf 8588985-169734898873489689973589879999878985999844887641141134534893899899980467
Q T0558 173 GQLLNSV-KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 251 (294)
Q Consensus 173 g~~~~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~ 251 (294)
....... .+...+.++.++++|+++++++.++.+.+||.++++.+....... .+....+.+||+.++
T Consensus 255 ~~~~~~~~~h~~~v~~v~~s~dg~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-------~v~~~~~s~dg~~l~----- 322 (337)
T 1gxr_A 255 KPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-------SVLSCDISVDDKYIV----- 322 (337)
T ss_dssp SSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-------CEEEEEECTTSCEEE-----
T ss_pred CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCC-------CEEEEEECCCCCEEE-----
T ss_conf 99688872578856799998999999999498949999999998999915999-------889999927999999-----
Q ss_pred CEEECCCCCCCEEEEECCCCCE-EEEEE
Q ss_conf 7143024777569999089989-99983
Q T0558 252 HDREAGKGKHPQLVEIDSEGKV-VWQLN 278 (294)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~G~~-vW~~~ 278 (294)
.-+.||.+ ||++-
T Consensus 323 --------------s~s~D~~i~iwdv~ 336 (337)
T 1gxr_A 323 --------------TGSGDKKATVYEVI 336 (337)
T ss_dssp --------------EEETTSCEEEEEEE
T ss_pred --------------EEECCCEEEEEEEE
T ss_conf --------------99799989999888
No 5
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=3.4e-20 Score=162.80 Aligned_cols=227 Identities=11% Similarity=0.058 Sum_probs=169.9
Q ss_pred CCC-CCEEEEECCCCEEEEEECCCC-----EEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEEC
Q ss_conf 788-858999747986999988788-----29999944998731164790798399841--8828997526770367723
Q T0558 20 SSP-QHLLVGGSGWNKIAIINKDTK-----EIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAA 91 (294)
Q Consensus 20 s~~-~~~l~~gs~~~~i~~~d~~tg-----~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~ 91 (294)
+++ .++|++||.|++|++||..+. ....++ .+|...+.+++|+|||++|+++ |+.+++|+.....+.....
T Consensus 391 ~~~~~~~l~Tgs~D~~v~vW~~~~~~~~~~~~~~~l-~gH~~~V~~l~~s~~~~~l~sg~~Dg~i~iwd~~~~~~~~~~~ 469 (694)
T 3dm0_A 391 PIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRL-TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV 469 (694)
T ss_dssp CTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEE-CCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 589998999993699399987899975454677997-4888878899996898999999799939999999996999996
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC--EEEEEECCCEEEEE
Q ss_conf 7776314878737875899970589799998568958899970677677667400899969989--99997469889999
Q T0558 92 PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN--YLVPLFATSEVREI 169 (294)
Q Consensus 92 ~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~--~i~~g~~d~~i~~~ 169 (294)
+|...+.+++|+|+++++++++.|+.+.+|+....... ........+...+.++.++|++. ++++++.++.+++|
T Consensus 470 ~h~~~V~~i~~s~~~~~l~s~s~Dg~v~iwd~~~~~~~---~~~~~~~~~~~~v~~i~~~~~~~~~~l~~~~~~~~~~~~ 546 (694)
T 3dm0_A 470 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY---TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 546 (694)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE---EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCE---EEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEE
T ss_conf 78998899999089999999978994999988999511---562035677787689997278874379997069945987
Q ss_pred ECCC-CEEEEEE-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCC---EEECCCCCE
Q ss_conf 3788-5889851-6973489887348968997358987999987898599984488764114113453---489389989
Q T0558 170 APNG-QLLNSVK-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ---LFPLQNGGL 244 (294)
Q Consensus 170 d~~g-~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~G~i 244 (294)
|... ....... +...+.++.++++++++++++.++.|++||..+++.+.++..+. ....+.+.++ +....+|.+
T Consensus 547 d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-~v~~i~~s~~~~ll~~~~d~~i 625 (694)
T 3dm0_A 547 NLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS-VIHALCFSPNRYWLCAATEHGI 625 (694)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS-CEEEEEECSSSSEEEEEETTEE
T ss_pred ECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCC-CEEEEEECCCCCEEEEECCCEE
T ss_conf 579973758981789987899996999999999289969999999993899980889-7899999089929999819939
Q ss_pred EEEECCC
Q ss_conf 9980467
Q T0558 245 YICNWQG 251 (294)
Q Consensus 245 ~i~~~~~ 251 (294)
.+++...
T Consensus 626 ~vwd~~~ 632 (694)
T 3dm0_A 626 KIWDLES 632 (694)
T ss_dssp EEEETTT
T ss_pred EEEECCC
T ss_conf 9998999
No 6
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.91 E-value=3.5e-20 Score=162.73 Aligned_cols=200 Identities=8% Similarity=-0.024 Sum_probs=164.1
Q ss_pred HHHCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCC--EEEE
Q ss_conf 32001478885899974798699998878829999944998731164790798399841--8828997526770--3677
Q T0558 14 APFAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRE--LWNI 89 (294)
Q Consensus 14 ~~~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~--~~~~ 89 (294)
+..++.+++++.++.++++ .|.++|.++++....+ .+|...+.+++|+|||++|+++ |+.+++||..... +...
T Consensus 21 ~~~~~~~p~g~~~~~~~g~-~v~i~~~~~~~~~~~~-~gH~~~v~~~~fSpdg~~lasgs~Dg~v~iWd~~~~~~~~~~~ 98 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCNGT-SVYTVPVGSLTDTEIY-TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTT 98 (611)
T ss_dssp CCCCEECTTSSEEEEEETT-EEEEEETTCSSCCEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEE
T ss_pred EEEEEECCCCCEEEEECCC-EEEEEECCCCCEEEEE-CCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 2899998999999998399-9999989998262677-6999988999999999999999289949999899996788999
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC-EEEEEECCCEE
Q ss_conf 2377763148787378758999705--89799998568958899970677677667400899969989-99997469889
Q T0558 90 AAPAGCEMQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEV 166 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~-~i~~g~~d~~i 166 (294)
..+|...+.+++|+||+++|++++. +..+.+|+..+|+.+.++ .+|...++++.|+|||+ .|++++.|++|
T Consensus 99 ~~~h~~~V~~l~fs~d~~~l~s~~~~~~~~~~v~~~~~g~~~~~l------~gh~~~V~~v~f~p~~~~~l~sgs~D~~v 172 (611)
T 1nr0_A 99 IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNL------TGQARAMNSVDFKPSRPFRIISGSDDNTV 172 (611)
T ss_dssp EECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCC------CCCSSCEEEEEECSSSSCEEEEEETTSCE
T ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEE------ECCCCCEEEEEECCCCCEEEEEEECCCEE
T ss_conf 647899888999989989999999698987999999899788999------67899888999978999599999689837
Q ss_pred EEEECC-CCEEEEEE-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 999378-85889851-69734898873489689973589879999878985999844
Q T0558 167 REIAPN-GQLLNSVK-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 167 ~~~d~~-g~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
++||.. ++...... +...+.++.++|+|+.+++++.++.+++||..++.......
T Consensus 173 ~vwd~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~~~~g~i~vwd~~~~~~~~~~~ 229 (611)
T 1nr0_A 173 AIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE 229 (611)
T ss_dssp EEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECB
T ss_pred EEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEE
T ss_conf 888505881888854888867877766999745653056633787146673011210
No 7
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3dxk_C* 3dxm_C*
Probab=99.89 E-value=1.8e-19 Score=157.53 Aligned_cols=216 Identities=10% Similarity=0.040 Sum_probs=169.7
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEE-CCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEE--EE
Q ss_conf 00147888589997479869999887882999994-4998731164790798399841--8828997526770367--72
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYP-LEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWN--IA 90 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~-~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~--~~ 90 (294)
..+.|+++++|++|+.++.|++||.++++...... .+|...+.+++|+|||++|+++ |+.+++|+........ ..
T Consensus 13 c~~~s~dg~~la~~~~d~~i~iw~~~~~~~~~~~~l~~H~~~V~~l~~s~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 13 CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp EEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEEC
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEE
T ss_conf 99998999999999289989999888997899999668899889999968989999997999399987776730479997
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEE
Q ss_conf 37776314878737875899970589799998568958899970677677667400899969989999974698899993
Q T0558 91 APAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIA 170 (294)
Q Consensus 91 ~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d 170 (294)
..+...+.+++|+|+++++++++.++.+.+|+.......+..... ...+...+.+++++||+++|++++.|++|++||
T Consensus 93 ~~~~~~i~~v~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~p~~~~l~s~s~D~~i~iwd 170 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI--KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE--CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCEEECCC--CCCCCCCEEEEECCCCCEEEEECCCCCEEEEEE
T ss_conf 058996789997577102676503320258703455210000002--467666088874166510334026999799998
Q ss_pred CCCC-------------------EEEEE-ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEE
Q ss_conf 7885-------------------88985-169734898873489689973589879999878985999844887641141
Q T0558 171 PNGQ-------------------LLNSV-KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQL 230 (294)
Q Consensus 171 ~~g~-------------------~~~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 230 (294)
.... .+... .+...+.++.++|+++.+++++.++.+++||..+++.+.++..+..+...+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~~~~~v~sv 250 (372)
T 1k8k_C 171 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAV 250 (372)
T ss_dssp CCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEE
T ss_conf 87876332113234454455204447612667756866026788559999689989999999994999991899998999
Q ss_pred CCC
Q ss_conf 134
Q T0558 231 FFV 233 (294)
Q Consensus 231 ~~~ 233 (294)
.+.
T Consensus 251 ~fs 253 (372)
T 1k8k_C 251 TFI 253 (372)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 990
No 8
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.89 E-value=9.4e-19 Score=152.32 Aligned_cols=245 Identities=10% Similarity=0.056 Sum_probs=150.8
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECC-----------------CCCCCCEEEEECCCCEEEEE--CCEE
Q ss_conf 0014788858999747986999988788299999449-----------------98731164790798399841--8828
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLE-----------------KGWECNSVAATKAGEILFSY--SKGA 76 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~-----------------~~~~~~~~~~~pdG~~l~s~--~~~v 76 (294)
.++.|+++++|++|+ |++|++||..+++.+.++... +...+.+++|+|||++|+++ |+.+
T Consensus 69 ~l~fS~dg~~lasg~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~d~~~l~s~~~d~~i 147 (393)
T 1erj_A 69 CVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLI 147 (393)
T ss_dssp EEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECCCCCEEEEEE-CCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE
T ss_conf 999999999999997-9989997777884400114653444563221000146788878899999999999999689849
Q ss_pred EEEECCCCCEEEEECCCCCCEEEEEECCC------------------------------------------CCEEEEEEC
Q ss_conf 99752677036772377763148787378------------------------------------------758999705
Q T0558 77 KMITRDGRELWNIAAPAGCEMQTARILPD------------------------------------------GNALVAWCG 114 (294)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~d------------------------------------------g~~l~~~s~ 114 (294)
++|+...........++...+..+.+.|+ ++++++++.
T Consensus 148 ~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 148 RIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCEECCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEC
T ss_conf 97766899388998067887787775025641001124544320100111000000024665113776799999999918
Q ss_pred CCCEEEEECCCCCEEEEEECCC-CCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCE-E------------E-EE
Q ss_conf 8979999856895889997067-767766740089996998999997469889999378858-8------------9-85
Q T0558 115 HPSTILEVNMKGEVLSKTEFET-GIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQL-L------------N-SV 179 (294)
Q Consensus 115 ~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~-~------------~-~~ 179 (294)
|+.+.+|+..++.....+.... ...+|...+.++.++|||++|++++.|+.|++||..... . . ..
T Consensus 228 d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~i~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
T 1erj_A 228 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI 307 (393)
T ss_dssp TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 99899987899927788604444333468976899998999999999799948998756776222102354452001100
Q ss_pred ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECCCC
Q ss_conf 16973489887348968997358987999987898599984488764114113453489389989998046771430247
Q T0558 180 KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKG 259 (294)
Q Consensus 180 ~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~ 259 (294)
.+...+..+.++++|+++++++.++.|++||.++++.+..+.+|......+.+.....+.++|++++
T Consensus 308 ~h~~~v~~~~~s~~~~~l~sgs~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~~p~~~~l~------------- 374 (393)
T 1erj_A 308 GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA------------- 374 (393)
T ss_dssp CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE-------------
T ss_pred CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEE-------------
T ss_conf 2344167999889999999996989799999999969999978899789999846741689999999-------------
Q ss_pred CCCEEEEECCCCCE-EEEEECC
Q ss_conf 77569999089989-9998358
Q T0558 260 KHPQLVEIDSEGKV-VWQLNDK 280 (294)
Q Consensus 260 ~~~~~~~i~~~G~~-vW~~~~~ 280 (294)
.-..||.+ ||+++..
T Consensus 375 ------s~s~Dg~v~iW~~~k~ 390 (393)
T 1erj_A 375 ------TGSGDCKARIWKYKKI 390 (393)
T ss_dssp ------EEETTSEEEEEEEEEC
T ss_pred ------EEECCCEEEEEECCCC
T ss_conf ------9918997999558876
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3cik_B 1a0r_B* 2bcj_B*
Probab=99.89 E-value=6.5e-18 Score=146.20 Aligned_cols=221 Identities=14% Similarity=0.100 Sum_probs=171.5
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCC----EEEE
Q ss_conf 001478885899974798699998878829999944998731164790798399841--8828997526770----3677
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRE----LWNI 89 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~----~~~~ 89 (294)
..+.++++++|++|+.|++|.+||..+++.+++++ .+...+.+++|+|||++++++ ++.+.+|+....+ ....
T Consensus 60 ~v~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 138 (340)
T 1got_B 60 AMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138 (340)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEE
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE-CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99996899999999289919999999997899995-79998889999799998999854634531000011244200157
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 23777631487873787589997058979999856895889997067767766740089996998999997469889999
Q T0558 90 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 169 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~ 169 (294)
..++...+..+.+.+++ .+++++.+..+.+|+..+++.++.... ....+..+.++|+++++++++.++.+++|
T Consensus 139 ~~~h~~~v~~~~~~~~~-~l~~~s~d~~v~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 211 (340)
T 1got_B 139 LAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTG------HTGDVMSLSLAPDTRLFVSGACDASAKLW 211 (340)
T ss_dssp EECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECC------CSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ECCCCCCEEEEECCCCC-EEEEECCCCCCCEECCCCCCCEEEEEC------CCCCCEEEEECCCCCCCCCCCCCCCCEEE
T ss_conf 24877737998628984-488864899710001368850032103------78885589988999823002344210014
Q ss_pred ECC-CCEEEEEEC-CCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEE
Q ss_conf 378-858898516-973489887348968997358987999987898599984488764114113453489389989998
Q T0558 170 APN-GQLLNSVKL-SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYIC 247 (294)
Q Consensus 170 d~~-g~~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~ 247 (294)
+.. +.....+.. ...+.++.++|+|+.+++++.++.+.+|+..+++.+..+...... ..+..+.+.++|++++.
T Consensus 212 ~~~~~~~~~~~~~h~~~v~~l~~sp~g~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~v~~~~~s~~g~~l~t 287 (340)
T 1got_B 212 DVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII----CGITSVSFSKSGRLLLA 287 (340)
T ss_dssp ETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC----SCEEEEEECTTSSEEEE
T ss_pred ECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCC----CCEEEEEECCCCCEEEE
T ss_conf 35888446765045533211223434220001578877999999999787777417866----61689999899999999
Q ss_pred E
Q ss_conf 0
Q T0558 248 N 248 (294)
Q Consensus 248 ~ 248 (294)
.
T Consensus 288 ~ 288 (340)
T 1got_B 288 G 288 (340)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.88 E-value=3.3e-18 Score=148.36 Aligned_cols=228 Identities=11% Similarity=0.107 Sum_probs=181.5
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCC
Q ss_conf 01478885899974798699998878829999944998731164790798399841--8828997526770367723777
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAG 94 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~ 94 (294)
++.++++++|++|+.|++|++||.++|++++++. +|...+.+++|+|+|.+|+++ |+.+++|+..............
T Consensus 114 v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~s~D~~i~i~~~~~~~~~~~~~~~~ 192 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192 (410)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCS
T ss_pred EEECCCCCEEEEECCCCCEEEEECCCCCCEEEEC-CCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9997999989995488853986547885203323-778864688866998779885043333222222111112222222
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-C
Q ss_conf 631487873787589997058979999856895889997067767766740089996998999997469889999378-8
Q T0558 95 CEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 173 (294)
Q Consensus 95 ~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g 173 (294)
.......+.+++..++.++.+..+.+|+..++..+..+. .+...+.++.++++|+++++++.|+.+++|+.. +
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~s~d~~i~~~~~~~~ 266 (410)
T 1vyh_C 193 HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT------GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEECC------CCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCC
T ss_conf 222111111356401210466541465304787201013------55676414778899999999918980898505775
Q ss_pred CEEEEEEC-CCEEEEEEEEC--------------------CCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECC
Q ss_conf 58898516-97348988734--------------------8968997358987999987898599984488764114113
Q T0558 174 QLLNSVKL-SGTPFSSAFLD--------------------NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFF 232 (294)
Q Consensus 174 ~~~~~~~~-~~~~~~~~~~~--------------------~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 232 (294)
........ ...+..+.+.| ++..+++++.++.+.+||...++.+..+..+......+.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~h~~~v~~~~~ 346 (410)
T 1vyh_C 267 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEE
T ss_conf 12268723577436887622565432123333310002789988999818997999977889178998568998799999
Q ss_pred CCC--EE--ECCCCCEEEEECCC
Q ss_conf 453--48--93899899980467
Q T0558 233 VAQ--LF--PLQNGGLYICNWQG 251 (294)
Q Consensus 233 ~~~--~~--~~~~G~i~i~~~~~ 251 (294)
.+. .. ...||.+.+|+...
T Consensus 347 s~~~~~l~sgs~dg~i~iwd~~~ 369 (410)
T 1vyh_C 347 HSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp CSSSSCEEEEETTTEEEEECCTT
T ss_pred CCCCCEEEEEECCCEEEEEECCC
T ss_conf 79999999997899699999999
No 11
>3emh_A WD repeat-containing protein 5; chromatin, histone, WD40 repeat, X-RAY crystallography, nucleus, phosphoprotein, WD repeat, zinc-finger; 1.37A {Homo sapiens} PDB: 2gnq_A 2h14_A 2h13_A 2h6n_A* 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 2h9l_A 2h9p_A 2h9m_A 2h9n_A 2o9k_A* 2cnx_A* 2co0_C 2g99_A* 2co0_A 2g9a_A*
Probab=99.88 E-value=2.8e-17 Score=141.50 Aligned_cols=253 Identities=13% Similarity=0.072 Sum_probs=190.8
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCC
Q ss_conf 01478885899974798699998878829999944998731164790798399841--8828997526770367723777
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAG 94 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~ 94 (294)
.+.++++++|++|+.|++|++||..+++++.++. .+...+..+.+.+++..+++. +..+.+|+....+.......+.
T Consensus 35 l~fspdg~~las~s~Dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (318)
T 3emh_A 35 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS 113 (318)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE-CCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 9998999999999389909998899994889984-146762145210112221101344213788888895227874147
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCC
Q ss_conf 63148787378758999705897999985689588999706776776674008999699899999746988999937885
Q T0558 95 CEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQ 174 (294)
Q Consensus 95 ~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~ 174 (294)
..+....+.++++.+++++.++.+.+|+..+++.+..+. .+...+++++++++|++|++++.|+.|++||....
T Consensus 114 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 187 (318)
T 3emh_A 114 NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP------AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 187 (318)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEE------CCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCC
T ss_conf 716676634888756775599979999999996999993------67897889999899999999889997999866434
Q ss_pred E-EEEEE--CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEE---ECC--CCCEEE--CCCCCE
Q ss_conf 8-89851--6973489887348968997358987999987898599984488764114---113--453489--389989
Q T0558 175 L-LNSVK--LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ---LFF--VAQLFP--LQNGGL 244 (294)
Q Consensus 175 ~-~~~~~--~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~---~~~--~~~~~~--~~~G~i 244 (294)
. ..... .......+.++++++.+++++.++.+.+++..++............... ... ...... ..+|.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 267 (318)
T 3emh_A 188 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 267 (318)
T ss_dssp CEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEEECTTSCE
T ss_pred CCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCEE
T ss_conf 11111124444531000138877667654389818998603432000001100001111223312798799999389979
Q ss_pred EEEECCCCE-EECCCCCCCEE--EEECCCCCEEEE
Q ss_conf 998046771-43024777569--999089989999
Q T0558 245 YICNWQGHD-REAGKGKHPQL--VEIDSEGKVVWQ 276 (294)
Q Consensus 245 ~i~~~~~~~-~~~~~~~~~~~--~~i~~~G~~vW~ 276 (294)
.+++..... .....++...+ ++++++|+.+-.
T Consensus 268 ~vwd~~~~~~~~~l~~h~~~v~~l~~sp~~~~l~t 302 (318)
T 3emh_A 268 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 302 (318)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEE
T ss_conf 99999999599999489999899999189899999
No 12
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.8e-18 Score=150.22 Aligned_cols=226 Identities=12% Similarity=0.164 Sum_probs=170.8
Q ss_pred CCCEEEEECCCCEEEEEECCCCEE----EE------EEE---------CCCCCCCCEEEEECCCCEEEEE--CCEEEEEE
Q ss_conf 885899974798699998878829----99------994---------4998731164790798399841--88289975
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEI----VW------EYP---------LEKGWECNSVAATKAGEILFSY--SKGAKMIT 80 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~----~w------~~~---------~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~ 80 (294)
...+|++|+.|+.+++|+...... .+ +.. ..|...+.+++|+|||++|+++ |+.+++|+
T Consensus 57 ~~~~latgs~D~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~l~sg~~Dg~v~vwd 136 (425)
T 1r5m_A 57 DESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN 136 (425)
T ss_dssp CTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEE
T ss_conf 98999999489939999777987665111221123345675100134578999989999989999999990799699998
Q ss_pred CCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC------------------------
Q ss_conf 26770367723777631487873787589997058979999856895889997067------------------------
Q T0558 81 RDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFET------------------------ 136 (294)
Q Consensus 81 ~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~------------------------ 136 (294)
..+.. .+...+|...+.+++|+|+++++++++.++.+.+|+..+++.........
T Consensus 137 ~~~~~-~~~l~~H~~~V~~l~~s~~g~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (425)
T 1r5m_A 137 KTGAL-LNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWV 215 (425)
T ss_dssp TTSCE-EEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEE
T ss_pred CCCCE-EEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEC
T ss_conf 98999-99993789988999999999999999655352452036785015530233564310112116887616899864
Q ss_pred --------------------------CCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEE-CCCEEEEE
Q ss_conf --------------------------767766740089996998999997469889999378-85889851-69734898
Q T0558 137 --------------------------GIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVK-LSGTPFSS 188 (294)
Q Consensus 137 --------------------------~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~~~-~~~~~~~~ 188 (294)
...++...+.++.++|+|+++++++.|+.|++||.. ++.+..+. +...+.++
T Consensus 216 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~v 295 (425)
T 1r5m_A 216 DDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSA 295 (425)
T ss_dssp ETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEE
T ss_pred CCCCEEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEE
T ss_conf 89737997499978987520210001554788976788850589725776188633888889997989996377757899
Q ss_pred EEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCC--EEE--CCCCCEEEEEC
Q ss_conf 87348968997358987999987898599984488764114113453--489--38998999804
Q T0558 189 AFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ--LFP--LQNGGLYICNW 249 (294)
Q Consensus 189 ~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~--~~~--~~~G~i~i~~~ 249 (294)
.+++++ .+++++.++.+++||.++++.+.....+..+...+.+.++ ... ..||.+.+|+.
T Consensus 296 ~~s~~~-~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~g~~dg~I~iwdl 359 (425)
T 1r5m_A 296 SWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred EECCCC-EEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
T ss_conf 998999-8998216776278899999499998379998899999689999999978998999989
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3cik_B 1a0r_B* 2bcj_B*
Probab=99.86 E-value=6.2e-17 Score=139.03 Aligned_cols=220 Identities=13% Similarity=-0.021 Sum_probs=171.2
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEE--EEE-CCCCCCCCEEEEECCCCEEEEE-CCEEEEEECCCCCEEEEEC
Q ss_conf 00147888589997479869999887882999--994-4998731164790798399841-8828997526770367723
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVW--EYP-LEKGWECNSVAATKAGEILFSY-SKGAKMITRDGRELWNIAA 91 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w--~~~-~~~~~~~~~~~~~pdG~~l~s~-~~~v~~~~~~~~~~~~~~~ 91 (294)
..+.++++++|++|+.++.+.+|+..+++... ... .+|...+..+.+.|++.+++.+ ++.+++|+...........
T Consensus 102 ~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~~~s~d~~v~~~~~~~~~~~~~~~ 181 (340)
T 1got_B 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT 181 (340)
T ss_dssp EEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCEECCCCCCCEEEEE
T ss_conf 99997999989998546345310000112442001572487773799862898448886489971000136885003210
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEEC
Q ss_conf 77763148787378758999705897999985689588999706776776674008999699899999746988999937
Q T0558 92 PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 171 (294)
Q Consensus 92 ~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~ 171 (294)
.....+..+.++|+++++++++.++.+.+|+..+++....+. .+...+.++.++|+|+++++++.|+.+++||.
T Consensus 182 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~h~~~v~~l~~sp~g~~~~~~~~d~~i~i~d~ 255 (340)
T 1got_B 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT------GHESDINAICFFPNGNAFATGSDDATCRLFDL 255 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEE------CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 378885589988999823002344210014358884467650------45533211223434220001578877999999
Q ss_pred CCC-EEEEEEC---CCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEE
Q ss_conf 885-8898516---973489887348968997358987999987898599984488764114113453489389989998
Q T0558 172 NGQ-LLNSVKL---SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYIC 247 (294)
Q Consensus 172 ~g~-~~~~~~~---~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~ 247 (294)
... .+..+.. ...+.++.++|+|+++++++.++.+.+||..+++.+..+.++..... .+.+.++|+.++.
T Consensus 256 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~t~~~dg~v~vwd~~~~~~~~~~~~h~~~V~------~l~~s~dg~~l~s 329 (340)
T 1got_B 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVS------CLGVTDDGMAVAT 329 (340)
T ss_dssp TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE------EEEECTTSSCEEE
T ss_pred CCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEE------EEEEECCCCEEEE
T ss_conf 9997877774178666168999989999999998999799999999958899827899889------9999179999999
No 14
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.86 E-value=6.2e-18 Score=146.34 Aligned_cols=232 Identities=8% Similarity=0.033 Sum_probs=161.6
Q ss_pred CCCCC--CCCEEEEECCCCEEEEEECCCCEEEEEEE-------CCCCCCCCEEEEECCCCEEEEE----CCEEEEEECCC
Q ss_conf 01478--88589997479869999887882999994-------4998731164790798399841----88289975267
Q T0558 17 AQGSS--PQHLLVGGSGWNKIAIINKDTKEIVWEYP-------LEKGWECNSVAATKAGEILFSY----SKGAKMITRDG 83 (294)
Q Consensus 17 ~~~s~--~~~~l~~gs~~~~i~~~d~~tg~~~w~~~-------~~~~~~~~~~~~~pdG~~l~s~----~~~v~~~~~~~ 83 (294)
+++|+ ++++|++|+.|++|++||..+++.+.+.. ..+...+.+++|+|||++|++. +..+.+|+.+.
T Consensus 70 ~~fsP~~~g~~lasgs~dg~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 149 (615)
T 1pgu_A 70 VKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS 149 (615)
T ss_dssp EEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT
T ss_pred EEECCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 99885899989999928991999989899423378302254140567976899999999989999888998699999989
Q ss_pred CCEEEEECCCCCCEEEEEECCCCCE-EEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCC-CCEEEEEE
Q ss_conf 7036772377763148787378758-999705897999985689588999706776776674008999699-89999974
Q T0558 84 RELWNIAAPAGCEMQTARILPDGNA-LVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLF 161 (294)
Q Consensus 84 ~~~~~~~~~~~~~v~~~~~~~dg~~-l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~d-G~~i~~g~ 161 (294)
+.......+|...+.+++|+|++++ +++++.|+.+.+|+...++....... ...+...++++.|+|| |.++++++
T Consensus 150 g~~~~~l~gH~~~V~~v~~~~~~~~~~~s~~~D~~v~~w~~~~~~~~~~~~~---~~~~~~~V~~v~~s~d~~~~~~s~~ 226 (615)
T 1pgu_A 150 GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT---HHKQGSFVRDVEFSPDSGEFVITVG 226 (615)
T ss_dssp CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS---SSCTTCCEEEEEECSTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCEEEEEE---CCCCCCCEEEEEECCCCCCEEEEEE
T ss_conf 9788999588897688998899993999995899589766178860056540---1688998889998699997899992
Q ss_pred CCCEEEEEECC-CCEEEEEECCC-EEEE---EEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCC--CCCEEEC--C
Q ss_conf 69889999378-85889851697-3489---8873489689973589879999878985999844887--6411411--3
Q T0558 162 ATSEVREIAPN-GQLLNSVKLSG-TPFS---SAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAND--IEGVQLF--F 232 (294)
Q Consensus 162 ~d~~i~~~d~~-g~~~~~~~~~~-~~~~---~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~--~~~~~~~--~ 232 (294)
.|+.+++||.+ +..+.....+. .+.+ ....++++.+++++.++.+.+||.++++.+..+.... ....... +
T Consensus 227 ~d~~i~iw~~~~g~~~~~l~~h~~~v~~~~~s~~~~d~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (615)
T 1pgu_A 227 SDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA 306 (615)
T ss_dssp TTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEE
T ss_pred CCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEC
T ss_conf 79828996504883888851235617479996445899889998489967765045542100010000135640899922
Q ss_pred CC-CE--EECCCCCEEEEECCC
Q ss_conf 45-34--893899899980467
Q T0558 233 VA-QL--FPLQNGGLYICNWQG 251 (294)
Q Consensus 233 ~~-~~--~~~~~G~i~i~~~~~ 251 (294)
.. +. ....||.+.+++...
T Consensus 307 ~~~~~~~s~s~dg~v~vwd~~~ 328 (615)
T 1pgu_A 307 TGNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp EETTEEEEEETTSCEEEEETTE
T ss_pred CCCCEEEEEECCCCCCCCCCCC
T ss_conf 8997799997899852001112
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, beta propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.86 E-value=5.9e-17 Score=139.16 Aligned_cols=199 Identities=12% Similarity=0.024 Sum_probs=129.4
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCC------CCEEE
Q ss_conf 01478885899974798699998878829999944998731164790798399841--88289975267------70367
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDG------RELWN 88 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~------~~~~~ 88 (294)
.+.++++++|++|+.|++|++||..+++.+..+. .+...+.++++.|++..++++ ++.+.+|.... .....
T Consensus 70 ~~fs~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~ 148 (354)
T 2pbi_B 70 MDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT-MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKK 148 (354)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCE
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE-CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEECCCCCCCEEE
T ss_conf 9996899999999589969999899883689995-699987899997899989997455345311000000256550357
Q ss_pred EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEE
Q ss_conf 72377763148787378758999705897999985689588999706776776674008999699899999746988999
Q T0558 89 IAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 168 (294)
Q Consensus 89 ~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~ 168 (294)
...++...+..++++|++..++..+.+....+|+....+......... ...........+...+++++..|+.+++
T Consensus 149 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~~i~i 224 (354)
T 2pbi_B 149 SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHG----ADVLCLDLAPSETGNTFVSGGCDKKAMV 224 (354)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS----SCEEEEEECCCSSCCEEEEEETTSCEEE
T ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCEEEEECCCCCEECCEECCCC----CCEEEEEEEEECCCCCCCCCCCCCCEEE
T ss_conf 871567856888975899838887402305750233310000003664----2024422211014762000268743799
Q ss_pred EECC-CCEEEEEE-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 9378-85889851-6973489887348968997358987999987898599984
Q T0558 169 IAPN-GQLLNSVK-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 220 (294)
Q Consensus 169 ~d~~-g~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~ 220 (294)
||.. ++...... +...+..+.++|+++.+++++.++.+.+|+..+++.+...
T Consensus 225 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~~ 278 (354)
T 2pbi_B 225 WDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCC
T ss_conf 988999530586057884678998899999999968985998622788621000
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.85 E-value=2e-16 Score=135.33 Aligned_cols=190 Identities=13% Similarity=0.064 Sum_probs=136.2
Q ss_pred EEEECCCCEEEEEECCCCEEEE---EEECCCCCCCCEEEEECCCCEEEEE-CCEEEEEECCCCCEEEEEC----------
Q ss_conf 9997479869999887882999---9944998731164790798399841-8828997526770367723----------
Q T0558 26 LVGGSGWNKIAIINKDTKEIVW---EYPLEKGWECNSVAATKAGEILFSY-SKGAKMITRDGRELWNIAA---------- 91 (294)
Q Consensus 26 l~~gs~~~~i~~~d~~tg~~~w---~~~~~~~~~~~~~~~~pdG~~l~s~-~~~v~~~~~~~~~~~~~~~---------- 91 (294)
++.+..++.+.+|++...+.+. ...++|...+.+++|+|||++|+++ |+.+++|+.....+.....
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fS~dg~~lasg~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 112 (393)
T 1erj_A 33 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPE 112 (393)
T ss_dssp TSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC---------
T ss_pred CCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCCEEEECCCCCCCCCCCC
T ss_conf 22457898289858878863165106527999838999999999999999799899977778844001146534445632
Q ss_pred --------CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECC
Q ss_conf --------777631487873787589997058979999856895889997067767766740089996998999997469
Q T0558 92 --------PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT 163 (294)
Q Consensus 92 --------~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d 163 (294)
.+...+.+++|+|||+++++++.|+.+.+|+...++...... .+...+..+.+++++..++.++.+
T Consensus 113 ~~~~~~~~~~~~~V~~l~~s~d~~~l~s~~~d~~i~i~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~~~~~ 186 (393)
T 1erj_A 113 NLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ------GHEQDIYSLDYFPSGDKLVSGSGD 186 (393)
T ss_dssp --------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE------CCCCCEEEEEEECCCCCEECCCCC
T ss_conf 21000146788878899999999999999689849977668993889980------678877877750256410011245
Q ss_pred CEEEEEECCC-CEEEEEECCCEEEEEEEE-CCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 8899993788-588985169734898873-489689973589879999878985999844
Q T0558 164 SEVREIAPNG-QLLNSVKLSGTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 164 ~~i~~~d~~g-~~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
+.++.|+... ..............+.+. .+++++++++.++.+++++..+++...++.
T Consensus 187 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~d~~i~i~~~~~~~~~~~~~ 246 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD 246 (393)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCCEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 443201001110000000246651137767999999999189989998789992778860
No 17
>3ei4_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, alternative splicing, disease mutation, DNA repair; HET: DNA; 3.30A {Homo sapiens}
Probab=99.85 E-value=1.2e-18 Score=151.52 Aligned_cols=194 Identities=11% Similarity=0.033 Sum_probs=152.1
Q ss_pred CCC-CCCCEEEEECCCCEEEEEECCCCEEEEEEE-CCCCCCCCEEEEEC-CCCEEEEE--CCEEEEEECCCCCEEEEEC-
Q ss_conf 147-888589997479869999887882999994-49987311647907-98399841--8828997526770367723-
Q T0558 18 QGS-SPQHLLVGGSGWNKIAIINKDTKEIVWEYP-LEKGWECNSVAATK-AGEILFSY--SKGAKMITRDGRELWNIAA- 91 (294)
Q Consensus 18 ~~s-~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~-~~~~~~~~~~~~~p-dG~~l~s~--~~~v~~~~~~~~~~~~~~~- 91 (294)
+.+ ++..+|++|+.|+.|.+||.++++..-.+. .+|...+.+++|+| |+++|+++ |+.+++|+..++.......
T Consensus 127 ~~~p~~~~~la~g~~dg~i~iw~~~~~~~~~~~~~~~H~~~V~~l~~~p~~~~~l~s~s~D~tv~iwd~~~~~~~~~~~~ 206 (436)
T 3ei4_B 127 AWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS 206 (436)
T ss_dssp EECSSCSSEEEEEESSSCEEEEESSSCSCCEEECCCSSSCCEEECCBCTTCTTEEEEEETTSEEEEEETTTEEEEEEEEC
T ss_pred EECCCCCCEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECC
T ss_conf 98789999999993889799997889983179963589998889998079998999994899699964488514798637
Q ss_pred -CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC-EEEEEECCCEEEEE
Q ss_conf -7776314878737875899970589799998568958899970677677667400899969989-99997469889999
Q T0558 92 -PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREI 169 (294)
Q Consensus 92 -~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~-~i~~g~~d~~i~~~ 169 (294)
.....+.+++++|+++++++++.++.+.+|+.. ++.+.++ ..+...+.++.|+|+++ +|++++.|+.|++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~~d~~-~~~~~~~------~~h~~~v~~v~~~p~~~~~l~s~~~d~~i~iw 279 (436)
T 3ei4_B 207 DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNL------RMHKKKVTHVALNPCCDWFLATASVDQTVKIW 279 (436)
T ss_dssp SSTTCCEEEECCBTTTTEEEEEESSSCEEEEETT-CCBCCCC------CCSSSCCCEEEECTTSTTEEEEECTTSEEEEE
T ss_pred CCCCEEEEEEEECCCCCEEEEEECCCCEEEEECC-CCEEEEE------ECCCCCCCEEEECCCCCCCEEEECCCCCEEEE
T ss_conf 8886118999989999999999489968886236-7325898------36788761599746777300434489967888
Q ss_pred ECCC-C----EEEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 3788-5----88985169734898873489689973589879999878985999
Q T0558 170 APNG-Q----LLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 218 (294)
Q Consensus 170 d~~g-~----~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~ 218 (294)
|... + ......+...+.++.++|+|+.+++++.++.+.+|+..+++...
T Consensus 280 d~~~~~~~~~~~~~~~h~~~V~~~~~sp~g~~l~s~s~d~~i~vw~~~~~~~~~ 333 (436)
T 3ei4_B 280 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 333 (436)
T ss_dssp ETTTCCSSSCCSEEEECSSCEEEEEECTTSSCEEEEESSSEEEEECTTCSSSCS
T ss_pred ECCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCE
T ss_conf 876887533677521456754048999999824877599979999899996105
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic protein, structural genomics, structural genomics consortiu; 1.70A {Homo sapiens}
Probab=99.84 E-value=3e-16 Score=134.08 Aligned_cols=266 Identities=12% Similarity=0.120 Sum_probs=183.7
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEE--CCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCE--EEE
Q ss_conf 00147888589997479869999887882999994--4998731164790798399841--88289975267703--677
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYP--LEKGWECNSVAATKAGEILFSY--SKGAKMITRDGREL--WNI 89 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~--~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~--~~~ 89 (294)
..++|+++++|++|+.|++|++||.++++.+.+.. .+|...+.+++|+|||++|+++ ++.++.|+...... ...
T Consensus 21 ~lafspdg~~lasg~~Dg~I~iWd~~~~~~~~~~~~~~gH~~~V~~l~~s~~~~~l~s~~~d~~v~~~~~~~~~~~~~~~ 100 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT 100 (345)
T ss_dssp EEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE
T ss_pred EEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEE
T ss_conf 99996999999999089939999778996788888626878988899998999978862166207998621466257788
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 23777631487873787589997058979999856895889997067767766740089996998999997469889999
Q T0558 90 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 169 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~ 169 (294)
...+...+..+.+.++++.+++++.++.+.+|+..+++........ ......+.++.+.|++.++++++.++.+.+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (345)
T 3fm0_A 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL---NSHTQDVKHVVWHPSQELLASASYDDTVKLY 177 (345)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE---CCCCSCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred ECCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEC---CCCCCCEEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 5166550678760798653688718984999975435331000000---5778863688878999889996135303788
Q ss_pred ECCCCE---EEEEE-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCE---------------EEEEE-CCCCCCCEE
Q ss_conf 378858---89851-69734898873489689973589879999878985---------------99984-488764114
Q T0558 170 APNGQL---LNSVK-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR---------------IVRRV-NANDIEGVQ 229 (294)
Q Consensus 170 d~~g~~---~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~---------------~~~~~-~~~~~~~~~ 229 (294)
+..... +.... +...+.++.++|+|.++++++.++.+.+|+..... ..... ..+......
T Consensus 178 ~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (345)
T 3fm0_A 178 REEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYD 257 (345)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEE
T ss_pred ECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCEE
T ss_conf 72599838989976887868899997999999999289848998435788642056403444311432112677765200
Q ss_pred ECCCC--CEE--ECCCCCEEEEECCCCE--------------------EECCC--CCCCE-EEEECCCCCE-EEEEECCC
Q ss_conf 11345--348--9389989998046771--------------------43024--77756-9999089989-99983588
Q T0558 230 LFFVA--QLF--PLQNGGLYICNWQGHD--------------------REAGK--GKHPQ-LVEIDSEGKV-VWQLNDKV 281 (294)
Q Consensus 230 ~~~~~--~~~--~~~~G~i~i~~~~~~~--------------------~~~~~--~~~~~-~~~i~~~G~~-vW~~~~~~ 281 (294)
+.+.. ... ...||.+.++...... +.... ..+.. ++.-..||.+ +|+++.++
T Consensus 258 ~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~l~~sp~~~~~l~s~s~Dg~I~iW~~~~~e 337 (345)
T 3fm0_A 258 IAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred EECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCC
T ss_conf 00135644205662899699998569975220011021012266579989999917999699999069979999798997
Q ss_pred CEE
Q ss_conf 537
Q T0558 282 KFG 284 (294)
Q Consensus 282 ~~~ 284 (294)
.+.
T Consensus 338 ~~~ 340 (345)
T 3fm0_A 338 GLH 340 (345)
T ss_dssp ---
T ss_pred CCC
T ss_conf 337
No 19
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2.4e-17 Score=142.03 Aligned_cols=199 Identities=11% Similarity=-0.008 Sum_probs=156.2
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEE-------
Q ss_conf 01478885899974798699998878829999944998731164790798399841--882899752677036-------
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELW------- 87 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~------- 87 (294)
.+.++++++|++|+.|++|++||. +++++.++. .|...+.+++|+|||++|++. ++.+++|+.......
T Consensus 114 l~~spdg~~l~sg~~Dg~v~vwd~-~~~~~~~l~-~H~~~V~~l~~s~~g~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~ 191 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVENGELRLWNK-TGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKE 191 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEET-TSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-
T ss_pred EEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEE-CCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCEEEEEECCC
T ss_conf 999899999999907996999989-899999993-789988999999999999999655352452036785015530233
Q ss_pred -------------------------------------------------EEECCCCCCEEEEEECCCCCEEEEEECCCCE
Q ss_conf -------------------------------------------------7723777631487873787589997058979
Q T0558 88 -------------------------------------------------NIAAPAGCEMQTARILPDGNALVAWCGHPST 118 (294)
Q Consensus 88 -------------------------------------------------~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~ 118 (294)
....++...+.++.++|+++++++++.++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 271 (425)
T 1r5m_A 192 TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp --------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred CCCCCEEEEECCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCE
T ss_conf 56431011211688761689986489737997499978987520210001554788976788850589725776188633
Q ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEEC-CCEEEEEEEECCCCE
Q ss_conf 999856895889997067767766740089996998999997469889999378-858898516-973489887348968
Q T0558 119 ILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL-SGTPFSSAFLDNGDC 196 (294)
Q Consensus 119 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~~~~-~~~~~~~~~~~~g~~ 196 (294)
.+|+..+++++..+. +|...++++.++||+. +++++.|+.|++||.. +..+..... ...+.++.++|+|++
T Consensus 272 ~iwd~~~~~~~~~~~------~h~~~V~~v~~s~~~~-l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 344 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFY------GHSQSIVSASWVGDDK-VISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQK 344 (425)
T ss_dssp EEECSSSBSCSEEEC------CCSSCEEEEEEETTTE-EEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSE
T ss_pred EEEECCCCCEEEEEE------CCCCCEEEEEECCCCE-EEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCE
T ss_conf 888889997989996------3777578999989998-998216776278899999499998379998899999689999
Q ss_pred EEECCCCCEEEEEECCCCE-EEEEECCCC
Q ss_conf 9973589879999878985-999844887
Q T0558 197 LVACGDAHCFVQLNLESNR-IVRRVNAND 224 (294)
Q Consensus 197 ~v~~~~~~~i~~~d~~~g~-~~~~~~~~~ 224 (294)
+++++.++.|++||.++.. ......++.
T Consensus 345 l~~g~~dg~I~iwdl~~~~~~~~~~~~h~ 373 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLKKLNSKSRSLYGNR 373 (425)
T ss_dssp EEEEETTSCEEEEECHHHHC---------
T ss_pred EEEEECCCEEEEEECCCCCCCEEEEECCC
T ss_conf 99997899899998999994148997578
No 20
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.8e-17 Score=139.87 Aligned_cols=205 Identities=10% Similarity=-0.021 Sum_probs=159.8
Q ss_pred HHCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE-CCEEEEEECCCCCEEEEECCC
Q ss_conf 2001478885899974798699998878829999944998731164790798399841-882899752677036772377
Q T0558 15 PFAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY-SKGAKMITRDGRELWNIAAPA 93 (294)
Q Consensus 15 ~~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~-~~~v~~~~~~~~~~~~~~~~~ 93 (294)
...+.++.+++|++|+.|++|++|+..+.+++.++ .+...+..++|+|||+++..+ |+.+.+|+...+.+......
T Consensus 21 tavAfdP~~~lLA~Gt~dG~I~V~~~~~~e~~~~~--~~~~~V~~L~F~~dg~Lvs~~~d~~I~vWdl~t~~~l~~~~~- 97 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL--EDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVFV- 97 (902)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC--SSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEEC-
T ss_pred EEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEC--CCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEECC-
T ss_conf 99999089899999927997999958998999993--899939999991899799999979299998999949999759-
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEE-----ECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEE
Q ss_conf 763148787378758999705897999985689588999-----706776776674008999699899999746988999
Q T0558 94 GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKT-----EFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 168 (294)
Q Consensus 94 ~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~ 168 (294)
+..+.+++++|+++++++++.++.+.+|+..+++..... ........|..++.++.++|++...+..+.++.+.+
T Consensus 98 ~~~It~l~~s~~~~~l~~G~~dG~V~vwdl~~~~~~~~~i~~~~~~~~~~~~h~~~V~~i~~~P~d~~~lli~~~~g~vl 177 (902)
T 2oaj_A 98 PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTLT 177 (902)
T ss_dssp SSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEEE
T ss_pred CCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEE
T ss_conf 99889999979989999992889599999989970430204530001124678898899998689997899988997899
Q ss_pred EECC-CCEEEEEE-------------------CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECC
Q ss_conf 9378-85889851-------------------697348988734896899735898799998789859998448
Q T0558 169 IAPN-GQLLNSVK-------------------LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA 222 (294)
Q Consensus 169 ~d~~-g~~~~~~~-------------------~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~ 222 (294)
||.+ ++.+..+. +...+.++.++|+|..+++++.|+.+.+||.++++.......
T Consensus 178 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~spdG~~lvTg~~DGsi~lWd~~~g~~~~~~~~ 251 (902)
T 2oaj_A 178 YSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTV 251 (902)
T ss_dssp EETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECS
T ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEC
T ss_conf 99889978999950245556677633210347777889999989999999991799799854799967678725
No 21
>1nex_B CDC4 protein, SCCDC4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, ligase, cell cycle; HET: TPO; 2.70A {Saccharomyces cerevisiae} SCOP: a.158.1.1 b.69.4.1
Probab=99.83 E-value=1.8e-16 Score=135.64 Aligned_cols=263 Identities=8% Similarity=0.006 Sum_probs=172.6
Q ss_pred CCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEE-ECCEEEEEECCCCCEEEEECCCCCCE
Q ss_conf 47888589997479869999887882999994499873116479079839984-18828997526770367723777631
Q T0558 19 GSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-YSKGAKMITRDGRELWNIAAPAGCEM 97 (294)
Q Consensus 19 ~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s-~~~~v~~~~~~~~~~~~~~~~~~~~v 97 (294)
.+.++++|++|+.|++|++||..+++.+.++. .+...+.+++|+|++.++.. .|+.+++|+...+........+....
T Consensus 128 ~~~~~~~l~tgs~Dg~I~vWd~~~~~~~~~~~-~h~~~V~~l~~s~~~~l~sgs~Dg~i~v~d~~~~~~~~~~~~~~~~~ 206 (464)
T 1nex_B 128 LQFEDNYVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTV 206 (464)
T ss_dssp EEEETTEEEEEETTTEEEEEETTTTEEEEEEE-CCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECCCSSCE
T ss_pred EEECCCEEEEEECCCEEEEEECCCCEEEEEEE-CCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCE
T ss_conf 99889999999189919999899993999997-89998899998799989999799947840378895889995268860
Q ss_pred E--EEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCC---------------CCCCCCCEEEECCCCCEEEEE
Q ss_conf 4--87873787589997058979999856895889997067767---------------766740089996998999997
Q T0558 98 Q--TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIE---------------RPHAQFRQINKNKKGNYLVPL 160 (294)
Q Consensus 98 ~--~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~---------------~~~~~~~~~~~s~dG~~i~~g 160 (294)
. ...+.+++.++++++.++.+.+|+..+++............ ...........+++|++++++
T Consensus 207 ~~~~~~~~~~~~~~~s~s~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 286 (464)
T 1nex_B 207 RCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSG 286 (464)
T ss_dssp EEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred EEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCEEEEE
T ss_conf 68875137886445652589869999889886002245301221101376544202110357642278886158702887
Q ss_pred ECCCEEEEEECCC-CEEEEEE-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEE
Q ss_conf 4698899993788-5889851-6973489887348968997358987999987898599984488764114113453489
Q T0558 161 FATSEVREIAPNG-QLLNSVK-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFP 238 (294)
Q Consensus 161 ~~d~~i~~~d~~g-~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
+.|+.++.||... ..+.... ....+....+.+++..+++++.++.+++||.++++.+.++.++......+.+.+....
T Consensus 287 ~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~vwd~~~~~~~~~l~~h~~~V~~~~~~~~~l~ 366 (464)
T 1nex_B 287 SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLV 366 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECSSEEE
T ss_pred CCCCEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEE
T ss_conf 17985997406787250352365304664012345304572179987998525775044898676530675406899999
Q ss_pred --CCCCCEEEEECCCCEEECCC-----------CCCCEEEEECCCCCE-EEEEECCCC
Q ss_conf --38998999804677143024-----------777569999089989-999835885
Q T0558 239 --LQNGGLYICNWQGHDREAGK-----------GKHPQLVEIDSEGKV-VWQLNDKVK 282 (294)
Q Consensus 239 --~~~G~i~i~~~~~~~~~~~~-----------~~~~~~~~i~~~G~~-vW~~~~~~~ 282 (294)
..||.+.+|+.......... ..+..++....||.+ ||+++..+.
T Consensus 367 s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgsd~~i~vwd~~tg~~ 424 (464)
T 1nex_B 367 SAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKL 424 (464)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEETTEEEEEETTTCCB
T ss_pred EEECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCE
T ss_conf 9989996999989998699981589927999986999899998099899999999969
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 1trj_A 3jyv_R*
Probab=99.83 E-value=4.3e-16 Score=132.88 Aligned_cols=199 Identities=11% Similarity=0.056 Sum_probs=147.6
Q ss_pred CCCCC-CCEEEEECCCCEEEEEECCCC-----EEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEE
Q ss_conf 14788-858999747986999988788-----29999944998731164790798399841--88289975267703677
Q T0558 18 QGSSP-QHLLVGGSGWNKIAIINKDTK-----EIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNI 89 (294)
Q Consensus 18 ~~s~~-~~~l~~gs~~~~i~~~d~~tg-----~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~ 89 (294)
+.+++ .++|++|+.|++|++||..+. ..+.++. +|...+.++.|+|||++|+++ |+.+++|+.........
T Consensus 24 ~~~~~~~~~l~s~s~Dg~i~vW~~~~~~~~~~~~~~~~~-~h~~~V~~~~~s~~~~~l~s~~~d~~~~~~~~~~~~~~~~ 102 (319)
T 3frx_A 24 ATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQR 102 (319)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EECCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEC-CCCCCEEEEEECCCCCEEEEECCCCEEEECCCCCCCEEEE
T ss_conf 992899989999918992999889999753567768872-8899888999958999777403671256312356730134
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCC------CEEEEEECC
Q ss_conf 23777631487873787589997058979999856895889997067767766740089996998------999997469
Q T0558 90 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKG------NYLVPLFAT 163 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG------~~i~~g~~d 163 (294)
...+......+.+.+++..+++++.|+.+.+|+... +....+. .+......+.+.+++ .+++++..|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 175 (319)
T 3frx_A 103 FVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLL------GHNDWVSQVRVVPNEKADDDSVTIISAGND 175 (319)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEEC------CCSSCEEEEEECCC------CCEEEEEETT
T ss_pred ECCCCCCEEEEEECCCCCEEEEECCCCCCEEEECCC-CEEEEEE------CCCCEEEEEEECCCCCCCCCCCEEEEECCC
T ss_conf 114455324443204775034203565526887477-6256662------245303455523775445664269995489
Q ss_pred CEEEEEECC-CCEEEEEE-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCC
Q ss_conf 889999378-85889851-69734898873489689973589879999878985999844887
Q T0558 164 SEVREIAPN-GQLLNSVK-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAND 224 (294)
Q Consensus 164 ~~i~~~d~~-g~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~ 224 (294)
+.+.+|+.. ++....+. ....+.++.++++++++++++.++.+.+|+..+.+....+..+.
T Consensus 176 ~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~dg~i~~~~~~~~~~~~~~~~~~ 238 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD 238 (319)
T ss_dssp SCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS
T ss_pred CEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCEEEEEECCCC
T ss_conf 649975068880889975789977899998999999999289969985057733557873687
No 23
>3acp_A WD40 protein, WD repeat-containing protein YGL004C; WD40 domain, chaperone; 2.00A {Saccharomyces cerevisiae}
Probab=99.82 E-value=6.3e-17 Score=139.00 Aligned_cols=252 Identities=11% Similarity=0.008 Sum_probs=175.2
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEE
Q ss_conf 885899974798699998878829999944998731164790798399841--882899752677036772377763148
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQT 99 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~ 99 (294)
....+..++.++.+..|+....+... ...+........+.+|++.|+++ |+.+++|+...+.+.....+|...+.+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~G~~dg~i~i~d~~~~~~~~~~~~H~~~V~~ 141 (417)
T 3acp_A 64 VGSHLYKARLDGHDFLFNTIIRDGSK--MLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITK 141 (417)
T ss_dssp EETTEEEEEETTEEEEEECEEEETTT--TSCCCCEEEEEEEESSSEEEEEEETTSCEEEEETTCCEEEEETTSSSSCEEE
T ss_pred CCCEEEEEECCCCEEEEECCCCCCCE--EECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEE
T ss_conf 68726898448828998626655515--6046987799999899999999968897999999999399997465886799
Q ss_pred EEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEE
Q ss_conf 7873787589997058979999856895889997067767766740089996998999997469889999378-858898
Q T0558 100 ARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNS 178 (294)
Q Consensus 100 ~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~ 178 (294)
++|+|+++++++++.|..+.+|+..+|+.+..+. +|...+++++++|+|++|++++.|++|++||.. +..+.+
T Consensus 142 l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~l~------gH~~~V~~v~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 215 (417)
T 3acp_A 142 LKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI------GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT 215 (417)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCCCEEEC------CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEEC------CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEE
T ss_conf 9996898999999489939999999996999984------8888678999978999999960787458888788937799
Q ss_pred EECCC-------------------------EEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEC-CCCCCCEEECC
Q ss_conf 51697-------------------------34898873489689973589879999878985999844-88764114113
Q T0558 179 VKLSG-------------------------TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN-ANDIEGVQLFF 232 (294)
Q Consensus 179 ~~~~~-------------------------~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~ 232 (294)
+.... .+..+.++++|+++++++.++.+.+||..+++...... .+......+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 295 (417)
T 3acp_A 216 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTV 295 (417)
T ss_dssp ECCTTCTTSCEEEEEEEESCCCCTTTSSSCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEE
T ss_pred EECCCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCEEE
T ss_conf 81467752012100111001110232035653069984043099999258846776255544210110000123310012
Q ss_pred CC---CEEE--CCCCCEEEEECCCCEEE---CCCCC-----------CCEEEEECCCCCE-EEEEECCC
Q ss_conf 45---3489--38998999804677143---02477-----------7569999089989-99983588
Q T0558 233 VA---QLFP--LQNGGLYICNWQGHDRE---AGKGK-----------HPQLVEIDSEGKV-VWQLNDKV 281 (294)
Q Consensus 233 ~~---~~~~--~~~G~i~i~~~~~~~~~---~~~~~-----------~~~~~~i~~~G~~-vW~~~~~~ 281 (294)
.+ ...+ ..||.+.+|+....... ...++ ...++.-..||.+ +|++.+..
T Consensus 296 ~~~~~~~l~sg~~dg~i~iwd~~s~~~~~~~~~~~~~~~V~~v~~s~~~~l~s~s~D~~i~iw~~~~~~ 364 (417)
T 3acp_A 296 DGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPE 364 (417)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTSTTSCSEEEESSTTSCEEEEEEETTEEEEEETTTEEEEEEEEECSS
T ss_pred EECCCCCCEEECCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCC
T ss_conf 211223314546699899999999962567785279997899998899999999489959999888976
No 24
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.82 E-value=2.7e-16 Score=134.32 Aligned_cols=257 Identities=9% Similarity=0.028 Sum_probs=174.4
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEE----EEEEECCC-CCCCCEEEEEC--CCCEEEEE--CCEEEEEECCCCCE
Q ss_conf 001478885899974798699998878829----99994499-87311647907--98399841--88289975267703
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEI----VWEYPLEK-GWECNSVAATK--AGEILFSY--SKGAKMITRDGREL 86 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~----~w~~~~~~-~~~~~~~~~~p--dG~~l~s~--~~~v~~~~~~~~~~ 86 (294)
.++.++.+++|+.++++ .+.+++.+.++. +.++. +| ...+.+++|+| ||++|+++ |+.+++|+...+..
T Consensus 23 ~l~~~p~~~~la~~~g~-~~~i~~~~~~~~~~~~~~~~~-gh~~~~v~~~~fsP~~~g~~lasgs~dg~v~iWd~~~~~~ 100 (615)
T 1pgu_A 23 HLSYDPTTNAIAYPCGK-SAFVRCLDDGDSKVPPVVQFT-GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKE 100 (615)
T ss_dssp CCEEETTTTEEEEEETT-EEEEEECCSSCCSSCSEEEEC-TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGG
T ss_pred EEEECCCCCEEEEECCC-EEEEEECCCCCCCCCCEEEEC-CCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCE
T ss_conf 99998996989997699-489997648777865048983-7799998999988589998999992899199998989942
Q ss_pred E--------EEECCCCCCEEEEEECCCCCEEEEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCE
Q ss_conf 6--------772377763148787378758999705--897999985689588999706776776674008999699899
Q T0558 87 W--------NIAAPAGCEMQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY 156 (294)
Q Consensus 87 ~--------~~~~~~~~~v~~~~~~~dg~~l~~~s~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~ 156 (294)
. .....+...+.+++|+|||+++++++. +..+.+|+..+|+.+.++ .+|...++++.|+|++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~g~~~~~l------~gH~~~V~~v~~~~~~~~ 174 (615)
T 1pgu_A 101 SNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEV------SGHSQRINACHLKQSRPM 174 (615)
T ss_dssp GTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEEC------CSCSSCEEEEEECSSSSC
T ss_pred EEEEECCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEE------ECCCCCEEEEEECCCCCE
T ss_conf 33783022541405679768999999999899998889986999999899788999------588897688998899993
Q ss_pred -EEEEECCCEEEEEECCCCEEE-EEE----CCCEEEEEEEECC-CCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEE
Q ss_conf -999746988999937885889-851----6973489887348-968997358987999987898599984488764114
Q T0558 157 -LVPLFATSEVREIAPNGQLLN-SVK----LSGTPFSSAFLDN-GDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ 229 (294)
Q Consensus 157 -i~~g~~d~~i~~~d~~g~~~~-~~~----~~~~~~~~~~~~~-g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~ 229 (294)
+++++.|+.|++||....... ... +...+.++.++++ +..+++++.++.+++||.++++++..+..+..+...
T Consensus 175 ~~~s~~~D~~v~~w~~~~~~~~~~~~~~~~~~~~V~~v~~s~d~~~~~~s~~~d~~i~iw~~~~g~~~~~l~~h~~~v~~ 254 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG 254 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEE
T ss_conf 99999589958976617886005654016889988899986999978999927982899650488388885123561747
Q ss_pred ECCC-----CCEE--ECCCCCEEEEECCCCEEEC----------------CCCCCCEEEEECCCCCE-EEEEECC
Q ss_conf 1134-----5348--9389989998046771430----------------24777569999089989-9998358
Q T0558 230 LFFV-----AQLF--PLQNGGLYICNWQGHDREA----------------GKGKHPQLVEIDSEGKV-VWQLNDK 280 (294)
Q Consensus 230 ~~~~-----~~~~--~~~~G~i~i~~~~~~~~~~----------------~~~~~~~~~~i~~~G~~-vW~~~~~ 280 (294)
..+. .... ...||.+.+|+........ .......++..+.+|.+ +|++...
T Consensus 255 ~~~s~~~~d~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~dg~v~vwd~~~~ 329 (615)
T 1pgu_A 255 GIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHD 329 (615)
T ss_dssp CEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEE
T ss_pred EEEECCCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCC
T ss_conf 999644589988999848996776504554210001000013564089992289977999978998520011121
No 25
>3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.2e-17 Score=141.16 Aligned_cols=195 Identities=12% Similarity=0.020 Sum_probs=149.5
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECC--CCEEEEEEECCCCCCCCEEEEE--CCCCEEEEE--CCEEEEEECCCCCEE--
Q ss_conf 00147888589997479869999887--8829999944998731164790--798399841--882899752677036--
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKD--TKEIVWEYPLEKGWECNSVAAT--KAGEILFSY--SKGAKMITRDGRELW-- 87 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~--tg~~~w~~~~~~~~~~~~~~~~--pdG~~l~s~--~~~v~~~~~~~~~~~-- 87 (294)
.+++++.+++|++||.|++|++||.. +++++.++. +|...+.++.|+ |||++|+++ |+.+++|+.......
T Consensus 14 ~~~fd~~G~~LaTgs~Dg~V~IWd~~~~t~~~~~~l~-gH~~~V~~l~fs~~~d~~~LaSgs~Dg~I~vWD~~t~~~~~~ 92 (753)
T 3jro_A 14 DAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQI 92 (753)
T ss_dssp EECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCCEEEEEEE-CCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEE
T ss_conf 9999899999999927992999965699863899992-789988899996289989999993899299998999976888
Q ss_pred EEECCCCCCEEEEEECCC--CCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECC-------------
Q ss_conf 772377763148787378--75899970589799998568958899970677677667400899969-------------
Q T0558 88 NIAAPAGCEMQTARILPD--GNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK------------- 152 (294)
Q Consensus 88 ~~~~~~~~~v~~~~~~~d--g~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~------------- 152 (294)
....+|...+.+++|+|+ +.++++++.|+.+.+|+..+++........ .+...++++.++|
T Consensus 93 ~~~~~h~~~V~sl~fsp~~~~~~l~sgs~Dg~V~lwdl~~~~~~~~~~~~----~~~~~v~~v~~~p~~~~~~~~~~~~~ 168 (753)
T 3jro_A 93 AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID----AHAIGVNSASWAPATIEEDGEHNGTK 168 (753)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE----CCSSCEEEEEECCCC---------CG
T ss_pred EEECCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEC----CCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf 98548889888999803999999999978993999988799756667730----67786578996676555442111278
Q ss_pred CCCEEEEEECCCEEEEEECCC-CE----EEEEE-CCCEEEEEEEECC---CCEEEECCCCCEEEEEECCCCE
Q ss_conf 989999974698899993788-58----89851-6973489887348---9689973589879999878985
Q T0558 153 KGNYLVPLFATSEVREIAPNG-QL----LNSVK-LSGTPFSSAFLDN---GDCLVACGDAHCFVQLNLESNR 215 (294)
Q Consensus 153 dG~~i~~g~~d~~i~~~d~~g-~~----~~~~~-~~~~~~~~~~~~~---g~~~v~~~~~~~i~~~d~~~g~ 215 (294)
+++++++++.|+.|++||... .. ..... +...+.++.++|+ +.++++++.++.+++|+.+++.
T Consensus 169 ~~~~l~sgs~dg~I~iwdl~~~~~~~~~~~~l~~h~~~i~sv~~~pd~~~~~~l~sgs~Dg~I~iw~~~~~~ 240 (753)
T 3jro_A 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp GGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCCEEEEEECCCEEEEEECCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEECCCCC
T ss_conf 999899993799799997779974201012113668996049987789989789999589949999544898
No 26
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B*
Probab=99.81 E-value=7.6e-16 Score=131.09 Aligned_cols=191 Identities=9% Similarity=-0.026 Sum_probs=147.9
Q ss_pred CCCC-CCCEEEEECCCCEEEEEECCCCEEEEEEEC-CCCCCCCEEEEEC-CCCEEEE--ECCEEEEEECCCCCEE--EEE
Q ss_conf 1478-885899974798699998878829999944-9987311647907-9839984--1882899752677036--772
Q T0558 18 QGSS-PQHLLVGGSGWNKIAIINKDTKEIVWEYPL-EKGWECNSVAATK-AGEILFS--YSKGAKMITRDGRELW--NIA 90 (294)
Q Consensus 18 ~~s~-~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~-~~~~~~~~~~~~p-dG~~l~s--~~~~v~~~~~~~~~~~--~~~ 90 (294)
+.++ ...+|++|+.|++|++||.++++.....+. ++...+.+++|+| ++..|++ .|+.+++|+..+.... ...
T Consensus 80 ~~~P~~~~~lasGs~dg~I~iWd~~~~~~~~~~~~~~h~~~V~~l~fsp~~~~~l~s~s~Dg~i~~wd~~~~~~~~~~~~ 159 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKT 159 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECC
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEEEE
T ss_conf 99579997999992879799998999970478964689998889998479999999998999099986456611588751
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC-EEEEEECCCEEEEE
Q ss_conf 37776314878737875899970589799998568958899970677677667400899969989-99997469889999
Q T0558 91 APAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREI 169 (294)
Q Consensus 91 ~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~-~i~~g~~d~~i~~~ 169 (294)
..+...+..+.++++++++++++.++.+.+|+....+. .... .+...++++.++|++. ++++++.|+.|++|
T Consensus 160 ~~~~~~~~~~~~s~~~~~l~sg~~dg~v~~wd~~~~~~-~~~~------~h~~~v~~v~~~p~~~~l~~s~s~D~~v~iw 232 (383)
T 3ei3_B 160 DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEI-FKEK------LHKAKVTHAEFNPRCDWLMATSSVDATVKLW 232 (383)
T ss_dssp CCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEE-EEEE------CSSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred CCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEEEE-EEEC------CCCCCEEEEEECCCCCEEEEEECCCCCEEEE
T ss_conf 37665079999889999999991899676641002457-8972------6689778999678877299997158828999
Q ss_pred ECC-----CCEEEEEECCCEEEEEEEEC-CCCEEEECCCCCEEEEEECCCCE
Q ss_conf 378-----85889851697348988734-89689973589879999878985
Q T0558 170 APN-----GQLLNSVKLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNR 215 (294)
Q Consensus 170 d~~-----g~~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~i~~~d~~~g~ 215 (294)
|.. ........+...+.++.++| +|..+++++.++.+++||...+.
T Consensus 233 d~~~~~~~~~~~~~~~h~~~v~~v~fsp~~g~~l~t~s~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 233 DLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp EGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred ECCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCC
T ss_conf 8878875640688850168156535336777157754699979999899988
No 27
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.81 E-value=4.9e-16 Score=132.48 Aligned_cols=172 Identities=8% Similarity=-0.007 Sum_probs=134.2
Q ss_pred CCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEE
Q ss_conf 998731164790798399841--882899752677036772377763148787378758999705897999985689588
Q T0558 52 EKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVL 129 (294)
Q Consensus 52 ~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~ 129 (294)
+|...+.+++|+|+|.+|+++ |+.+++|+...+.+.+...+|...+.+++|+|++.++++++.|+.+.+|+.......
T Consensus 106 gH~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~s~D~~i~i~~~~~~~~~ 185 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI 185 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 87888689999799998999548885398654788520332377886468886699877988504333322222211111
Q ss_pred EEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEE-CCCEEEEEEEECCCCEEEECCCCCEEE
Q ss_conf 9997067767766740089996998999997469889999378-85889851-697348988734896899735898799
Q T0558 130 SKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVK-LSGTPFSSAFLDNGDCLVACGDAHCFV 207 (294)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~ 207 (294)
.... ..........+++++..+++++.|+.+.+|+.. +..+.... +...+..+.+.+++..+++++.++.+.
T Consensus 186 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 259 (410)
T 1vyh_C 186 RTMH------GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp ECCC------CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCC------CCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEECCCCCCCCEEEEECCCCCEEEEECCCCCEE
T ss_conf 2222------2222221111113564012104665414653047872010135567641477889999999991898089
Q ss_pred EEECCCCEEEEEECCCCCCCEE
Q ss_conf 9987898599984488764114
Q T0558 208 QLNLESNRIVRRVNANDIEGVQ 229 (294)
Q Consensus 208 ~~d~~~g~~~~~~~~~~~~~~~ 229 (294)
+++..+++....+.........
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~ 281 (410)
T 1vyh_C 260 VWVVATKECKAELREHRHVVEC 281 (410)
T ss_dssp EEETTTCCEEEEECCCSSCEEE
T ss_pred EEECCCCCEEEEEECCCCCEEE
T ss_conf 8505775122687235774368
No 28
>3emh_A WD repeat-containing protein 5; chromatin, histone, WD40 repeat, X-RAY crystallography, nucleus, phosphoprotein, WD repeat, zinc-finger; 1.37A {Homo sapiens} PDB: 2gnq_A 2h14_A 2h13_A 2h6n_A* 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 2h9l_A 2h9p_A 2h9m_A 2h9n_A 2o9k_A* 2cnx_A* 2co0_C 2g99_A* 2co0_A 2g9a_A*
Probab=99.81 E-value=2.6e-15 Score=127.20 Aligned_cols=218 Identities=10% Similarity=0.054 Sum_probs=143.8
Q ss_pred CCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCC
Q ss_conf 1478885899974798699998878829999944998731164790798399841--88289975267703677237776
Q T0558 18 QGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGC 95 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~ 95 (294)
..+....+++++..++.+.+||..+++...++. .+...+....+.|++..+++. ++.+++|+....+.......+..
T Consensus 78 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 156 (318)
T 3emh_A 78 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 156 (318)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEE-CCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 210112221101344213788888895227874-1477166766348887567755999799999999969999936789
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCE
Q ss_conf 31487873787589997058979999856895889997067767766740089996998999997469889999378858
Q T0558 96 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQL 175 (294)
Q Consensus 96 ~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~ 175 (294)
.+.+++++|+++++++++.|+.+.+|+....+....... .+......+.++++++++++++.|+.+++|+.....
T Consensus 157 ~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~ 231 (318)
T 3emh_A 157 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-----DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 231 (318)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-----SSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred CEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCC-----CCCCCCEEECCCCCCCEEEEECCCCCEEEEEECCCC
T ss_conf 788999989999999988999799986643411111124-----444531000138877667654389818998603432
Q ss_pred EE-EEECC----CEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEE
Q ss_conf 89-85169----73489887348968997358987999987898599984488764114113453489389989998
Q T0558 176 LN-SVKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYIC 247 (294)
Q Consensus 176 ~~-~~~~~----~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~ 247 (294)
.. ..... .........+++.++++++.++.+++||.++++.+.++..+..... .+.+.++|++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~h~~~v~------~l~~sp~~~~l~t 302 (318)
T 3emh_A 232 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVI------STACHPTENIIAS 302 (318)
T ss_dssp EEEEECSSCCSSSCCCEEEECSSSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEE------EEEECSSSSEEEE
T ss_pred CCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEE------EEEECCCCCEEEE
T ss_conf 0000011000011112233127987999993899799999999959999948999989------9999189899999
No 29
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoplasm, cytoskeleton, nucleotide-binding; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.81 E-value=2.9e-18 Score=148.73 Aligned_cols=198 Identities=8% Similarity=0.018 Sum_probs=154.2
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCE--EEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCC---EEE
Q ss_conf 00147888589997479869999887882--9999944998731164790798399841--8828997526770---367
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKE--IVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRE---LWN 88 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~--~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~---~~~ 88 (294)
.++++++..+|++|+.|+.|.+||.+++. .+.+++ +|...+.+++|+|||.+|+++ |+.+++|+..... ...
T Consensus 16 ~~~f~~~~~~la~~~~d~~i~iw~~~~~~~~~~~~l~-~H~~~V~~i~~sp~~~~l~s~s~D~~v~iW~~~~~~~~~~~~ 94 (377)
T 3dwl_C 16 EHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp CCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEEC-CCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEEE
T ss_conf 9999899899999948797999984699559989987-889988999997998999999899949998612556614105
Q ss_pred EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEE
Q ss_conf 72377763148787378758999705897999985689588999706776776674008999699899999746988999
Q T0558 89 IAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 168 (294)
Q Consensus 89 ~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~ 168 (294)
...++...+..++|+|+|+++++++.|+.+.+|+...++..+..... ...+...+.++.++|||++|++++.|+++++
T Consensus 95 ~~~~~~~~v~~v~~sp~g~~la~~s~d~~v~iw~~~~~~~~~~~~~~--~~~~~~~v~~l~~~p~~~~l~~~s~D~~v~~ 172 (377)
T 3dwl_C 95 VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHL--KRPLRSTILSLDWHPNNVLLAAGCADRKAYV 172 (377)
T ss_dssp ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEE--CSSCCSCEEEEEECTTSSEEEEEESSSCEEE
T ss_pred EECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCEEEEEE--EECCCCEEEEEEECCCCCEEEEEECCCEEEE
T ss_conf 95588998899997774331257728945999864555652024788--5112554999888899999999948994999
Q ss_pred EECCCC-------------------EEEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEE
Q ss_conf 937885-------------------889851697348988734896899735898799998789859
Q T0558 169 IAPNGQ-------------------LLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 216 (294)
Q Consensus 169 ~d~~g~-------------------~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~ 216 (294)
|+.... ......+.+.+.++.++|+|+.+++++.++.+++||..+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~D~~i~i~d~~~~~~ 239 (377)
T 3dwl_C 173 LSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCC
T ss_conf 7641245456766321123278631787058765078999999999999997899499998999876
No 30
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.80 E-value=1e-16 Score=137.46 Aligned_cols=220 Identities=10% Similarity=0.050 Sum_probs=154.7
Q ss_pred EECCCCEEEEEECC-CCEEEEEEE--CCCCCCCCEEEEEC-CCCEEEEE--CCEEEEEECCCCCE-------EEEECCCC
Q ss_conf 97479869999887-882999994--49987311647907-98399841--88289975267703-------67723777
Q T0558 28 GGSGWNKIAIINKD-TKEIVWEYP--LEKGWECNSVAATK-AGEILFSY--SKGAKMITRDGREL-------WNIAAPAG 94 (294)
Q Consensus 28 ~gs~~~~i~~~d~~-tg~~~w~~~--~~~~~~~~~~~~~p-dG~~l~s~--~~~v~~~~~~~~~~-------~~~~~~~~ 94 (294)
.+++++.|.+|+.. +|+.....+ .+|...+.+++|+| |+++|+++ |+.+++|+...+.. .....+|.
T Consensus 52 ~~~~~G~i~v~~l~~~gr~~~~~~~~~GH~~~V~~l~fsp~~~~~lasgs~D~~v~iWdi~~~~~~~~~~~~~~~~~gH~ 131 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131 (402)
T ss_dssp CCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred ECCCCCEEEEEECCCCCCCCCCCCCEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCC
T ss_conf 63799889999898877458765215177888789999289991999997888707986114442101241026640558
Q ss_pred CCEEEEEECCCCC-EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-
Q ss_conf 6314878737875-89997058979999856895889997067767766740089996998999997469889999378-
Q T0558 95 CEMQTARILPDGN-ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 172 (294)
Q Consensus 95 ~~v~~~~~~~dg~-~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~- 172 (294)
..+..++|+|++. +|++++.|+.+.+|+..+|+.+.++.. ..|...+.+++++|||++|++++.|+.|++||..
T Consensus 132 ~~V~~~~f~p~~~~~l~s~s~d~~i~iwd~~~~~~~~~l~~----~~h~~~I~sl~~s~dg~~l~t~~~d~~i~iwD~r~ 207 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP----DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT----TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEECC----CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 88546998324432999973799278751344313565115----67788346888537898021146654211111100
Q ss_pred CCEEEEEEC---CCEEEEEEEECCCCEEEEC---CCCCEEEEEECCCCEEEEEE--CCCCCCCEEECCCC--CEEE---C
Q ss_conf 858898516---9734898873489689973---58987999987898599984--48876411411345--3489---3
Q T0558 173 GQLLNSVKL---SGTPFSSAFLDNGDCLVAC---GDAHCFVQLNLESNRIVRRV--NANDIEGVQLFFVA--QLFP---L 239 (294)
Q Consensus 173 g~~~~~~~~---~~~~~~~~~~~~g~~~v~~---~~~~~i~~~d~~~g~~~~~~--~~~~~~~~~~~~~~--~~~~---~ 239 (294)
++....... ...+..+.++++|+.++++ +.+..+++||..+++..... ..+........+.+ +..+ .
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~f~~dg~~l~~g~s~~~D~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~pd~~~~~~sgs 287 (402)
T 2aq5_A 208 GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGK 287 (402)
T ss_dssp TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEET
T ss_pred EEEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEC
T ss_conf 11221003542034300010012685775400247898799821789850279981587565678898389996999984
Q ss_pred CCCCEEEEECCC
Q ss_conf 899899980467
Q T0558 240 QNGGLYICNWQG 251 (294)
Q Consensus 240 ~~G~i~i~~~~~ 251 (294)
.||++.+|+...
T Consensus 288 ~D~~Iriwdi~~ 299 (402)
T 2aq5_A 288 GDSSIRYFEITS 299 (402)
T ss_dssp TCSCEEEEEECS
T ss_pred CCCCEEEEECCC
T ss_conf 899318988169
No 31
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on protein structural and functional analysis, structural genomics consortium; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.80 E-value=9.3e-17 Score=137.73 Aligned_cols=253 Identities=11% Similarity=0.075 Sum_probs=166.1
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEE---CC-CCCCCCEEEEE----CCCCEEEEE--CCEEEEEECCCCCEEEEEC
Q ss_conf 88589997479869999887882999994---49-98731164790----798399841--8828997526770367723
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYP---LE-KGWECNSVAAT----KAGEILFSY--SKGAKMITRDGRELWNIAA 91 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~---~~-~~~~~~~~~~~----pdG~~l~s~--~~~v~~~~~~~~~~~~~~~ 91 (294)
.+.++++++++++|++||..+++.+..++ .. .......++++ +++.+|+++ |+.+++|+...+++.+...
T Consensus 33 ~~~~~~as~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~dg~I~iwd~~~~~~~~~l~ 112 (366)
T 3k26_A 33 GDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp TSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 99099999889969999877998889998673886787388889996558999999999188959999999995999995
Q ss_pred CCCCCEEEEEECC-CCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEE
Q ss_conf 7776314878737-875899970589799998568958899970677677667400899969989999974698899993
Q T0558 92 PAGCEMQTARILP-DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIA 170 (294)
Q Consensus 92 ~~~~~v~~~~~~~-dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d 170 (294)
+|...+.+++|+| +++++++++.|+.+.+|+..+++.+..+.. ..+|...+.+++++|+|++|++++.|+.|++||
T Consensus 113 gH~~~V~~i~f~p~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~~gh~~~V~~l~~~~~g~~l~s~~~d~~i~lwd 189 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG---VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWR 189 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS---TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEC---CCCCCCCEEEEEECCCCCEEEECCCCCCEEEEE
T ss_conf 78998889999489998999995899799971778813799701---367768788999859988545404776517888
Q ss_pred CCCCEEE-EE----------------------------E-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCE-----
Q ss_conf 7885889-85----------------------------1-69734898873489689973589879999878985-----
Q T0558 171 PNGQLLN-SV----------------------------K-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR----- 215 (294)
Q Consensus 171 ~~g~~~~-~~----------------------------~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~----- 215 (294)
....... .. . +...+..+.+ .++++++++.++.+.+|+.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~s~d~~i~lw~~~~~~~~~~~ 267 (366)
T 3k26_A 190 INSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRW--LGDLILSKSCENAIVCWKPGKMEDDIDK 267 (366)
T ss_dssp SCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEE--ETTEEEEECSSSEEEEEEESSTTCCGGG
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEE--CCCEEEEECCCCEEEEEECCCCCCCCEE
T ss_conf 89995878982431337875522111330430000002354672678962--1779999758997999778887754101
Q ss_pred ---------EEEEECCCCCCCEEECCC----CCEEE--CCCCCEEEEECCCCEEE-----CCCC----CCCEEEEECCCC
Q ss_conf ---------999844887641141134----53489--38998999804677143-----0247----775699990899
Q T0558 216 ---------IVRRVNANDIEGVQLFFV----AQLFP--LQNGGLYICNWQGHDRE-----AGKG----KHPQLVEIDSEG 271 (294)
Q Consensus 216 ---------~~~~~~~~~~~~~~~~~~----~~~~~--~~~G~i~i~~~~~~~~~-----~~~~----~~~~~~~i~~~G 271 (294)
+......+......+.+. ..... ..+|.+++|+....... ...+ ....-+++++||
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~~~lasg~~dg~i~iwd~~~~~~~~~~~~~l~~~~~~~~V~~v~~s~dg 347 (366)
T 3k26_A 268 IKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDS 347 (366)
T ss_dssp CCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTS
T ss_pred ECCCCCCCEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCC
T ss_conf 02553210001200134675356787208999999999497989999897998563267898378899988999997999
Q ss_pred CEEEEEEC
Q ss_conf 89999835
Q T0558 272 KVVWQLND 279 (294)
Q Consensus 272 ~~vW~~~~ 279 (294)
+.+..-.+
T Consensus 348 ~~l~s~~~ 355 (366)
T 3k26_A 348 SILIAVCD 355 (366)
T ss_dssp SEEEEEET
T ss_pred CEEEEEEC
T ss_conf 99999937
No 32
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.80 E-value=6.4e-15 Score=124.33 Aligned_cols=251 Identities=9% Similarity=-0.011 Sum_probs=177.2
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECC---CCCCCCEEEEECCCCEEEEE---CCEEEEEECCCCCEEEE
Q ss_conf 0014788858999747986999988788299999449---98731164790798399841---88289975267703677
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLE---KGWECNSVAATKAGEILFSY---SKGAKMITRDGRELWNI 89 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~---~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~~~~~~~~~ 89 (294)
-++.+++++++++.+.++.|.+||.+||+++...+.+ .+.........|||+.|+.. ++.+.+||....+....
T Consensus 127 ~Va~s~d~~~~v~~~~d~~i~v~D~~tg~~~r~~~~g~~~~~~~~~~~va~PDg~~LyVa~~~~~~V~v~D~~Tg~~i~~ 206 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEE
T ss_conf 28987898699995599968999899995888865655556666376589589999999979999899999999959999
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE-------
Q ss_conf 237776314878737875899970-589799998568958899970677677667400899969989999974-------
Q T0558 90 AAPAGCEMQTARILPDGNALVAWC-GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF------- 161 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~------- 161 (294)
...+...+..++++|||++++++. .+..+.+++..+++.++.+.... ....++++|||++++++.
T Consensus 207 i~~~G~~P~~va~spdG~~lyVa~~~~~~V~viD~~t~~~v~~i~~~~-------~P~gia~spDG~~lyVa~~~~~~~~ 279 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-------LPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-------EEEEEEECTTSSEEEEEEEESCTTC
T ss_pred EECCCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEECCCC-------CCCEEEECCCCCEEEEECCCCCCCC
T ss_conf 955689856999981357799974389989999999994999987899-------8207998776560169616755334
Q ss_pred -CCCEEEEEECC-CCEEEEEECCCEEEEEEEECCCCE-EEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEE
Q ss_conf -69889999378-858898516973489887348968-997358987999987898599984488764114113453489
Q T0558 162 -ATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDC-LVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFP 238 (294)
Q Consensus 162 -~d~~i~~~d~~-g~~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
.++.+.++|.. ++..........+....+.++++. +++...++.+.++|..+++++..+..... +.++.+
T Consensus 280 ~~~~~v~ViD~~t~~~~~~i~~~~~p~~i~~~~d~~~lyVt~~~~~~V~viD~~t~~v~~~i~~g~~-------P~~ia~ 352 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDK-------PNTIAL 352 (433)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSS-------EEEEEE
T ss_pred CCCCEEEEEECCCCCCEEECCCCCCCEEEEEEEECCCEEEEECCCCCEEEECCCCCEEEEEECCCCC-------CCEEEE
T ss_conf 6897489997887830141145788405887520231021000268525521676416775315898-------327999
Q ss_pred CCCCCEE-EEECCCC------------------------EE--ECCCCCCCEEEEECCCCCEEEEEECC
Q ss_conf 3899899-9804677------------------------14--30247775699990899899998358
Q T0558 239 LQNGGLY-ICNWQGH------------------------DR--EAGKGKHPQLVEIDSEGKVVWQLNDK 280 (294)
Q Consensus 239 ~~~G~i~-i~~~~~~------------------------~~--~~~~~~~~~~~~i~~~G~~vW~~~~~ 280 (294)
.+||+.+ +.++... .+ ....+..+.-+++++||+.+|--...
T Consensus 353 spDG~~LyVa~~~~~~~~~~~~~~~~~~~~V~vID~~t~~v~~~i~vG~~P~gva~spDG~~lyVsn~~ 421 (433)
T 3bws_A 353 SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFL 421 (433)
T ss_dssp CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETT
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC
T ss_conf 389999999946898202331036776755999999998299887079976589995898999999899
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on protein structural and functional analysis, structural genomics consortium; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.80 E-value=1.4e-14 Score=121.91 Aligned_cols=225 Identities=12% Similarity=0.035 Sum_probs=157.4
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEC-CCCEEEEE--CCEEEEEECCCCCEEEE---E
Q ss_conf 014788858999747986999988788299999449987311647907-98399841--88289975267703677---2
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILFSY--SKGAKMITRDGRELWNI---A 90 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~p-dG~~l~s~--~~~v~~~~~~~~~~~~~---~ 90 (294)
...++.+.+|++|+.|+.|++||.++++++.++. +|...+.+++|+| |+.+|+++ |+.+++|+......... .
T Consensus 79 ~~~~~~~~~lasg~~dg~I~iwd~~~~~~~~~l~-gH~~~V~~i~f~p~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 79 YDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp ECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST
T ss_pred ECCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE-CCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECC
T ss_conf 6558999999999188959999999995999995-789988899994899989999958997999717788137997013
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC----------------------CCCCCCCCCCCCEE
Q ss_conf 37776314878737875899970589799998568958899970----------------------67767766740089
Q T0558 91 APAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEF----------------------ETGIERPHAQFRQI 148 (294)
Q Consensus 91 ~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~----------------------~~~~~~~~~~~~~~ 148 (294)
.+|...+.+++|+|+++++++++.|+.+.+|+..+++....+.. ......+...+.++
T Consensus 158 ~gh~~~V~~l~~~~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 237 (366)
T 3k26_A 158 EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 237 (366)
T ss_dssp TSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEE
T ss_pred CCCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEE
T ss_conf 67768788999859988545404776517888899958789824313378755221113304300000023546726789
Q ss_pred EECCCCCEEEEEECCCEEEEEECCCCE--------------E-EEE-ECCCEEEEEEEEC--CCCEEEECCCCCEEEEEE
Q ss_conf 996998999997469889999378858--------------8-985-1697348988734--896899735898799998
Q T0558 149 NKNKKGNYLVPLFATSEVREIAPNGQL--------------L-NSV-KLSGTPFSSAFLD--NGDCLVACGDAHCFVQLN 210 (294)
Q Consensus 149 ~~s~dG~~i~~g~~d~~i~~~d~~g~~--------------~-~~~-~~~~~~~~~~~~~--~g~~~v~~~~~~~i~~~d 210 (294)
+++ |+++++++.|+.|++|+..... . ... .....+..+.+++ .++++++++.++.+++||
T Consensus 238 ~~~--~~~l~s~s~d~~i~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~~~lasg~~dg~i~iwd 315 (366)
T 3k26_A 238 RWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWD 315 (366)
T ss_dssp EEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEE
T ss_pred EEC--CCEEEEECCCCEEEEEECCCCCCCCEEECCCCCCCEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEE
T ss_conf 621--779999758997999778887754101025532100012001346753567872089999999994979899998
Q ss_pred CCCCE----EEEEECCCCCCCEEECCCCCEEECCCCCEEEEE
Q ss_conf 78985----999844887641141134534893899899980
Q T0558 211 LESNR----IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 248 (294)
Q Consensus 211 ~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~ 248 (294)
.++++ ....+..+... ..+..+.+.+||++++..
T Consensus 316 ~~~~~~~~~~~~~l~~~~~~----~~V~~v~~s~dg~~l~s~ 353 (366)
T 3k26_A 316 LEVEDPHKAKCTTLTHHKCG----AAIRQTSFSRDSSILIAV 353 (366)
T ss_dssp CCSSSGGGCEEEEECCTTCC----SCEEEEEECTTSSEEEEE
T ss_pred CCCCCCCCEEEEEECCCCCC----CCEEEEEECCCCCEEEEE
T ss_conf 97998563267898378899----988999997999999999
No 34
>2zkq_a 40S ribosomal protein RACK1; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.80 E-value=2.4e-14 Score=120.16 Aligned_cols=228 Identities=11% Similarity=0.068 Sum_probs=170.5
Q ss_pred CCCCC-CCEEEEECCCCEEEEEECCCCEEEEEEEC----CCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEE
Q ss_conf 14788-85899974798699998878829999944----998731164790798399841--882899752677036772
Q T0558 18 QGSSP-QHLLVGGSGWNKIAIINKDTKEIVWEYPL----EKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIA 90 (294)
Q Consensus 18 ~~s~~-~~~l~~gs~~~~i~~~d~~tg~~~w~~~~----~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~ 90 (294)
+.+++ .++|++|+.|++|++||..+++.....+. +|...+.+++++|||+++++. ++.++.+...........
T Consensus 22 ~~~p~~~~~l~t~s~Dg~i~iW~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (317)
T 2zkq_a 22 ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF 101 (317)
T ss_dssp ECCCSSTTEEEEECTTSEEEEEESSSSCEEEEEECCCSSSCCCSCSEEEECTTSSEEEEECTTCEEEEEESSSSSEEEEE
T ss_pred EEECCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE
T ss_conf 99589999999991899299988999975545234887078898889999899985888605626999850577312575
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC--EEEEEECCCEEEE
Q ss_conf 37776314878737875899970589799998568958899970677677667400899969989--9999746988999
Q T0558 91 APAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN--YLVPLFATSEVRE 168 (294)
Q Consensus 91 ~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~--~i~~g~~d~~i~~ 168 (294)
.........+.+.+++.++++++.|+.+.+|+........... ..+...+.++.++|++. ++++++.|+.+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~~ 176 (317)
T 2zkq_a 102 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176 (317)
T ss_dssp EECCSSCEEEEEESSSSEEEEEETTTEEEEEETTTCCEEEEEE-----CC-CCEEEEEECTTCSSSSCEEEEETTSCEEE
T ss_pred ECCCCCEEEEEEECCCCEEEEECCCCCEEEECCCCCCEEEEEE-----CCCCCCCEEEEECCCCCCCEEEEECCCCEEEE
T ss_conf 0577853688860578614610578960450157772024550-----46777513689723899878999649972999
Q ss_pred EECC-CCEEEEEE-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCC---EEECCCCC
Q ss_conf 9378-85889851-6973489887348968997358987999987898599984488764114113453---48938998
Q T0558 169 IAPN-GQLLNSVK-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ---LFPLQNGG 243 (294)
Q Consensus 169 ~d~~-g~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~G~ 243 (294)
||.. +....... +...+..+.++|+++++++++.++.+.+++....+.+.....+.. .....+.++ +....++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~d~~ 255 (317)
T 2zkq_a 177 WNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGPS 255 (317)
T ss_dssp ECTTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEESSCE-EEEEECTTSSEEEEEESSSC
T ss_pred EECCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCE-EEEECCCCCCEEEEECCCCE
T ss_conf 87788824455337888557899978999678762789628720366604588548715-87511587410455248997
Q ss_pred EEEEECCC
Q ss_conf 99980467
Q T0558 244 LYICNWQG 251 (294)
Q Consensus 244 i~i~~~~~ 251 (294)
+.+++..+
T Consensus 256 i~iwd~~~ 263 (317)
T 2zkq_a 256 IKIWDLEG 263 (317)
T ss_dssp EEEEECCC
T ss_pred EEEEECCC
T ss_conf 99998999
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.80 E-value=2.3e-15 Score=127.54 Aligned_cols=199 Identities=15% Similarity=0.072 Sum_probs=165.3
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEE---EC
Q ss_conf 01478885899974798699998878829999944998731164790798399841--88289975267703677---23
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNI---AA 91 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~---~~ 91 (294)
...++++++|++|+.|++|++||..+++.+.++. +|...+.+++|+||+++|+++ |+.+++|+..+...... ..
T Consensus 436 l~~s~~~~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~h~~~V~~i~~s~~~~~l~s~s~Dg~v~iwd~~~~~~~~~~~~~~ 514 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGE 514 (694)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTT
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE-CCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCEEEEECCC
T ss_conf 9996898999999799939999999996999996-789988999990899999999789949999889995115620356
Q ss_pred CCCCCEEEEEECCCCC--EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 7776314878737875--89997058979999856895889997067767766740089996998999997469889999
Q T0558 92 PAGCEMQTARILPDGN--ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 169 (294)
Q Consensus 92 ~~~~~v~~~~~~~dg~--~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~ 169 (294)
.+...+.++.++|++. ++++++.++.+.+|+..+.+....+. .|...+.++.++|+|++|++++.|+.|++|
T Consensus 515 ~~~~~v~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~------~~~~~i~~i~~~~~~~~l~t~~~dg~i~iw 588 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA------GHTGYVSTVAVSPDGSLCASGGKDGVVLLW 588 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSBCEEE
T ss_pred CCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCEEEEEEC------CCCCCEEEEEECCCCCEEEEEECCCEEEEE
T ss_conf 77787689997278874379997069945987579973758981------789987899996999999999289969999
Q ss_pred EC-CCCEEEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 37-8858898516973489887348968997358987999987898599984488
Q T0558 170 AP-NGQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 223 (294)
Q Consensus 170 d~-~g~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~ 223 (294)
|. +++.+.....+..+.++.+++++.++ +++.++.+++||..+++++..+...
T Consensus 589 d~~~~~~~~~~~~~~~v~~i~~s~~~~ll-~~~~d~~i~vwd~~~~~~~~~~~~~ 642 (694)
T 3dm0_A 589 DLAEGKKLYSLEANSVIHALCFSPNRYWL-CAATEHGIKIWDLESKSIVEDLKVD 642 (694)
T ss_dssp ETTTTEEEECCBCSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC
T ss_pred ECCCCCEEEEECCCCCEEEEEECCCCCEE-EEECCCEEEEEECCCCCEEEEEECC
T ss_conf 99999389998088978999990899299-9981993999989999488998436
No 36
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.3e-15 Score=129.32 Aligned_cols=189 Identities=14% Similarity=0.062 Sum_probs=144.0
Q ss_pred CCEEEEECCCCEEEEEECCCCEE--EEEEEC-CCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCC-------CEEEEE
Q ss_conf 85899974798699998878829--999944-998731164790798399841--882899752677-------036772
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEI--VWEYPL-EKGWECNSVAATKAGEILFSY--SKGAKMITRDGR-------ELWNIA 90 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~--~w~~~~-~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~-------~~~~~~ 90 (294)
..+|++|+.|++|++||..+++. +..+.. +|...+.+++|+|||++|+++ |+.+++|+.... ......
T Consensus 24 ~~~l~tgs~D~~i~iwd~~~~~~~~~~~~~~~~H~~~V~~v~~sp~~~~l~sg~~Dg~i~iw~~~~~~~~~~~~~~~~~~ 103 (330)
T 2hes_X 24 QGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAII 103 (330)
T ss_dssp TTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEE
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEE
T ss_conf 99999995899299998659975789999813778988899995999999999079979996546675312354166897
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEE
Q ss_conf 37776314878737875899970589799998568958899970677677667400899969989999974698899993
Q T0558 91 APAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIA 170 (294)
Q Consensus 91 ~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d 170 (294)
.+|...+.+++|+|++.++++++.++.+.+|+..++....+.... ...+...+..+.++|+++++++++.|+.+++||
T Consensus 104 ~~h~~~V~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~i~d 181 (330)
T 2hes_X 104 EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISV--LQEHSQDVKHVIWHPSEALLASSSYDDTVRIWK 181 (330)
T ss_dssp C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEE--ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCEEEEE--CCCCCCEEEEEECCCCCCEEEEECCCCEEEEEE
T ss_conf 078898899998689970125504654202553878753111011--057776288874067521347424887799998
Q ss_pred CCCCE-E--EEEE-CCCEEEEEEEECCCC--EEEECCCCCEEEEEECCC
Q ss_conf 78858-8--9851-697348988734896--899735898799998789
Q T0558 171 PNGQL-L--NSVK-LSGTPFSSAFLDNGD--CLVACGDAHCFVQLNLES 213 (294)
Q Consensus 171 ~~g~~-~--~~~~-~~~~~~~~~~~~~g~--~~v~~~~~~~i~~~d~~~ 213 (294)
..... . .... +...+.++.+.++++ .+++++.++.+++|+...
T Consensus 182 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d~~i~iw~~~~ 230 (330)
T 2hes_X 182 DYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCC
T ss_conf 8767620003423778984479990589955115445899899997789
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.4e-15 Score=127.42 Aligned_cols=199 Identities=12% Similarity=0.012 Sum_probs=141.9
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCC--CEEEEEEECCCCCCCCEEEEE--CCCCEEEEE--CCEEEEEECCCCCEE--E
Q ss_conf 01478885899974798699998878--829999944998731164790--798399841--882899752677036--7
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDT--KEIVWEYPLEKGWECNSVAAT--KAGEILFSY--SKGAKMITRDGRELW--N 88 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~t--g~~~w~~~~~~~~~~~~~~~~--pdG~~l~s~--~~~v~~~~~~~~~~~--~ 88 (294)
++.++++++|++||.|++|++||.++ ++++.++. +|...+.++.|+ ++|.+|+++ |+.+++|+....... .
T Consensus 17 i~~~~~G~~latgs~D~~V~iwd~~~~~~~~~~~l~-gH~~~V~~l~~s~~~~~~~l~s~~~D~~v~vwd~~~~~~~~~~ 95 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIA 95 (379)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCCEEEEEEC-CCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 999799999999917992999975599843889981-7899888999942899999999706756641011111111111
Q ss_pred EECCCCCCEEEEEECC--CCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECC-------------C
Q ss_conf 7237776314878737--875899970589799998568958899970677677667400899969-------------9
Q T0558 89 IAAPAGCEMQTARILP--DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-------------K 153 (294)
Q Consensus 89 ~~~~~~~~v~~~~~~~--dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~-------------d 153 (294)
....+...+..+.++| ++.++++++.|+.+.+|+............. .+...+.++.++| +
T Consensus 96 ~~~~h~~~v~~v~~~~~~~~~~~~~~~~dg~i~v~d~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T 3jrp_A 96 VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID----AHAIGVNSASWAPATIEEDGEHNGTKE 171 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE----CCTTCEEEEEECCCC----------CT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC----CCCCCCEEEEEECCCCCCCCCEECCCC
T ss_conf 1111111111111111111111111112232204761112000110011----124533034310133454310000478
Q ss_pred CCEEEEEECCCEEEEEECC-CCE----EEEEE-CCCEEEEEEEECC---CCEEEECCCCCEEEEEECCC--CEEEEEE
Q ss_conf 8999997469889999378-858----89851-6973489887348---96899735898799998789--8599984
Q T0558 154 GNYLVPLFATSEVREIAPN-GQL----LNSVK-LSGTPFSSAFLDN---GDCLVACGDAHCFVQLNLES--NRIVRRV 220 (294)
Q Consensus 154 G~~i~~g~~d~~i~~~d~~-g~~----~~~~~-~~~~~~~~~~~~~---g~~~v~~~~~~~i~~~d~~~--g~~~~~~ 220 (294)
+..+++++.|+.+++|+.. +.. ..... +...+.++.++|+ +.++++++.|+.+++|+... +.....+
T Consensus 172 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~l~sgs~D~~v~iw~~~~~~~~~~~~l 249 (379)
T 3jrp_A 172 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL 249 (379)
T ss_dssp TCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEE
T ss_conf 988999947995778741233321000223467676421322367766613688763899799995778767310554
No 38
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.78 E-value=7.2e-17 Score=138.57 Aligned_cols=203 Identities=12% Similarity=0.006 Sum_probs=141.0
Q ss_pred CCCCC-CCEEEEECCCCEEEEEECCCCEEEEEE----ECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCE---E
Q ss_conf 14788-858999747986999988788299999----44998731164790798399841--88289975267703---6
Q T0558 18 QGSSP-QHLLVGGSGWNKIAIINKDTKEIVWEY----PLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGREL---W 87 (294)
Q Consensus 18 ~~s~~-~~~l~~gs~~~~i~~~d~~tg~~~w~~----~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~---~ 87 (294)
+.+++ ..+|++||.|++|++||.++.+....+ ...+...+.+++|.|++.+|+++ |+.+++|+.+.... .
T Consensus 70 ~~sp~~~~~l~sgs~DgtikvWd~~~~~~~~~~~~~~~~~h~~~V~~l~f~~~~~~l~s~s~Dg~i~~w~i~~~~~~~~~ 149 (437)
T 3gre_A 70 AVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEV 149 (437)
T ss_dssp EEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEE
T ss_pred EECCCCCCEEEEEECCCEEEEEECCCCCCCEECCEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCEE
T ss_conf 99489992999961899199998998867453030585148998899999389999999979997999980388875303
Q ss_pred E---------EE----CCCCCCEEEEEECCCC-CEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCC
Q ss_conf 7---------72----3777631487873787-58999705897999985689588999706776776674008999699
Q T0558 88 N---------IA----APAGCEMQTARILPDG-NALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 153 (294)
Q Consensus 88 ~---------~~----~~~~~~v~~~~~~~dg-~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~d 153 (294)
+ .. ..+...+....+.+++ .++++++.++.+++|+.++++..+++... .+...+++++++|+
T Consensus 150 ~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~i~~wD~~~~~~~~~l~~~----~~~g~v~s~~~~~~ 225 (437)
T 3gre_A 150 KFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS----PRHGAVSSICIDEE 225 (437)
T ss_dssp EEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC----GGGCCEEEEEECTT
T ss_pred EECCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC----CCCCCEEEEECCCC
T ss_conf 41575236788740588987608999982899949999989997899855778611110013----43561566406841
Q ss_pred CCEEEEEECCCEEEEEECCC-CEEEEEE--CCCEEEEEEEE---CCCCEEEE-CCCCCEEEEEECCCCEEEEEECCCC
Q ss_conf 89999974698899993788-5889851--69734898873---48968997-3589879999878985999844887
Q T0558 154 GNYLVPLFATSEVREIAPNG-QLLNSVK--LSGTPFSSAFL---DNGDCLVA-CGDAHCFVQLNLESNRIVRRVNAND 224 (294)
Q Consensus 154 G~~i~~g~~d~~i~~~d~~g-~~~~~~~--~~~~~~~~~~~---~~g~~~v~-~~~~~~i~~~d~~~g~~~~~~~~~~ 224 (294)
|++|++|+.||.|++||... ..+..+. ....+..+... +++..+++ ++.++.+.+||.++++....+..+.
T Consensus 226 ~~~l~sgs~dg~i~lWDlr~~~~~~~~~~~~~~~i~~v~~~~~~~~~~~~~~~gs~~~~i~vWd~~~~~~~~~~~~~~ 303 (437)
T 3gre_A 226 CCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD 303 (437)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSS
T ss_pred CCEEEECCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 045760257886459988889587888868988677799985279996389740677789999789993899995778
No 39
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.78 E-value=2.8e-16 Score=134.25 Aligned_cols=195 Identities=10% Similarity=0.036 Sum_probs=149.4
Q ss_pred CCCCC-CCCEEEEECCCCEEEEEECCCCEEEEEEE------CCCCCCCCEEEEECCCC-EEEEE--CCEEEEEECCCCCE
Q ss_conf 01478-88589997479869999887882999994------49987311647907983-99841--88289975267703
Q T0558 17 AQGSS-PQHLLVGGSGWNKIAIINKDTKEIVWEYP------LEKGWECNSVAATKAGE-ILFSY--SKGAKMITRDGREL 86 (294)
Q Consensus 17 ~~~s~-~~~~l~~gs~~~~i~~~d~~tg~~~w~~~------~~~~~~~~~~~~~pdG~-~l~s~--~~~v~~~~~~~~~~ 86 (294)
++.++ ++++|++||.|++|++||..+++...+.. .+|...+.+++|+|++. +|+++ |+.+++||...+..
T Consensus 87 l~fsp~~~~~lasgs~D~~v~iWdi~~~~~~~~~~~~~~~~~gH~~~V~~~~f~p~~~~~l~s~s~d~~i~iwd~~~~~~ 166 (402)
T 2aq5_A 87 IAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA 166 (402)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE
T ss_pred EEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCEE
T ss_conf 99928999199999788870798611444210124102664055888546998324432999973799278751344313
Q ss_pred EEEE--CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE---E
Q ss_conf 6772--3777631487873787589997058979999856895889997067767766740089996998999997---4
Q T0558 87 WNIA--APAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL---F 161 (294)
Q Consensus 87 ~~~~--~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g---~ 161 (294)
.... .+|...+++++|+|||+++++++.|+.+.+|+.++|++..+...... ......+.|++||++++++ +
T Consensus 167 ~~~l~~~~h~~~I~sl~~s~dg~~l~t~~~d~~i~iwD~r~~~~~~~~~~~~~----~~~~~~~~f~~dg~~l~~g~s~~ 242 (402)
T 2aq5_A 167 VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHE----GTRPVHAVFVSEGKILTTGFSRM 242 (402)
T ss_dssp EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSC----SSSCCEEEECSTTEEEEEEECTT
T ss_pred EEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCE----EEEEEEEEECCCCCEEEEEECCC
T ss_conf 56511567788346888537898021146654211111100112210035420----34300010012685775400247
Q ss_pred CCCEEEEEECCC-C---EEEEEECCCEEEEEEEECCCCE-EEECCCCCEEEEEECCCCE
Q ss_conf 698899993788-5---8898516973489887348968-9973589879999878985
Q T0558 162 ATSEVREIAPNG-Q---LLNSVKLSGTPFSSAFLDNGDC-LVACGDAHCFVQLNLESNR 215 (294)
Q Consensus 162 ~d~~i~~~d~~g-~---~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~i~~~d~~~g~ 215 (294)
.|+.|++||... . ......+...+..+.+.|+++. +++++.|+.|++||..+++
T Consensus 243 ~D~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~pd~~~~~~sgs~D~~Iriwdi~~~~ 301 (402)
T 2aq5_A 243 SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCC
T ss_conf 89879982178985027998158756567889838999699998489931898816998
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3dxk_C* 3dxm_C*
Probab=99.78 E-value=3.5e-15 Score=126.25 Aligned_cols=200 Identities=8% Similarity=-0.037 Sum_probs=148.9
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEEC-CCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCE----EE
Q ss_conf 001478885899974798699998878829999944-998731164790798399841--88289975267703----67
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPL-EKGWECNSVAATKAGEILFSY--SKGAKMITRDGREL----WN 88 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~-~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~----~~ 88 (294)
..+.++++++|++|+.|++|++||.++++....+.. .+...+.++.|+|+++.++++ ++.+++|+.+.... ..
T Consensus 57 ~l~~s~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~ 136 (372)
T 1k8k_C 57 GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 136 (372)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCEEECC
T ss_conf 99996898999999799939998777673047999705899678999757710267650332025870345521000000
Q ss_pred EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE------------CCCCCCCCCCCCCEEEECCCCCE
Q ss_conf 723777631487873787589997058979999856895889997------------06776776674008999699899
Q T0558 89 IAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTE------------FETGIERPHAQFRQINKNKKGNY 156 (294)
Q Consensus 89 ~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~------------~~~~~~~~~~~~~~~~~s~dG~~ 156 (294)
...++...+.+++|+|+++++++++.|+.+.+|+........... .......+...+.++.|+|+|++
T Consensus 137 ~~~~~~~~v~~v~~~p~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 216 (372)
T 1k8k_C 137 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR 216 (372)
T ss_dssp ECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE
T ss_pred CCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCE
T ss_conf 24676660888741665103340269997999988787633211323445445520444761266775686602678855
Q ss_pred EEEEECCCEEEEEECC-CCEEEEEECC-CEEEEEEEECCCCEEEECCCCCEEEEEE--CCCCEE
Q ss_conf 9997469889999378-8588985169-7348988734896899735898799998--789859
Q T0558 157 LVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLN--LESNRI 216 (294)
Q Consensus 157 i~~g~~d~~i~~~d~~-g~~~~~~~~~-~~~~~~~~~~~g~~~v~~~~~~~i~~~d--~~~g~~ 216 (294)
|++++.|++|++||.. +..+.....+ .++.++.++++|++++++. ++.+.+++ ..++..
T Consensus 217 l~s~s~d~~i~~wd~~~~~~~~~~~~~~~~v~sv~fs~dg~~la~g~-d~~~~~~~~~~~~~~~ 279 (372)
T 1k8k_C 217 VAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKL 279 (372)
T ss_dssp EEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEE
T ss_pred EEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCEEEEEE-CCEEEEEEEECCCCEE
T ss_conf 99996899899999999949999918999989999908999999996-9939999986899639
No 41
>3ei4_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, alternative splicing, disease mutation, DNA repair; HET: DNA; 3.30A {Homo sapiens}
Probab=99.78 E-value=2.2e-16 Score=135.07 Aligned_cols=221 Identities=10% Similarity=0.006 Sum_probs=152.6
Q ss_pred CCCC-CCCEEEEECCCCEEEEEECCCCEEEEEEECC-CCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCC
Q ss_conf 1478-8858999747986999988788299999449-98731164790798399841--882899752677036772377
Q T0558 18 QGSS-PQHLLVGGSGWNKIAIINKDTKEIVWEYPLE-KGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPA 93 (294)
Q Consensus 18 ~~s~-~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~-~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~ 93 (294)
+.++ +.++|++++.|++|++||..+++........ ....+.+++++||+.+|+++ ++.+++|+..++.+.+ ..++
T Consensus 172 ~~~p~~~~~l~s~s~D~tv~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~~d~~~~~~~~-~~~h 250 (436)
T 3ei4_B 172 KFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWN-LRMH 250 (436)
T ss_dssp CBCTTCTTEEEEEETTSEEEEEETTTEEEEEEEECSSTTCCEEEECCBTTTTEEEEEESSSCEEEEETTCCBCCC-CCCS
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEE-EECC
T ss_conf 980799989999948996999644885147986378886118999989999999999489968886236732589-8367
Q ss_pred CCCEEEEEECCCCC-EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC
Q ss_conf 76314878737875-89997058979999856895889997067767766740089996998999997469889999378
Q T0558 94 GCEMQTARILPDGN-ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 172 (294)
Q Consensus 94 ~~~v~~~~~~~dg~-~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~ 172 (294)
...+.++.|+|+++ ++++++.|+.+.+|+..+++....+.. ...+...+.++.|+|||++|++++.|+.|++|+..
T Consensus 251 ~~~v~~v~~~p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~h~~~V~~~~~sp~g~~l~s~s~d~~i~vw~~~ 327 (436)
T 3ei4_B 251 KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLY---SLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 327 (436)
T ss_dssp SSCCCEEEECTTSTTEEEEECTTSEEEEEETTTCCSSSCCSE---EEECSSCEEEEEECTTSSCEEEEESSSEEEEECTT
T ss_pred CCCCCEEEECCCCCCCEEEECCCCCEEEEECCCCCCCEEEEE---ECCCCCCCEEEEECCCCCEEEEECCCCEEEEEECC
T ss_conf 887615997467773004344899678888768875336775---21456754048999999824877599979999899
Q ss_pred -CCEEEEEE-------CCCEEEEEEEECCCCEEEECCC------------CCEEEEEECCCCEEEEEECCCCCCCEEECC
Q ss_conf -85889851-------6973489887348968997358------------987999987898599984488764114113
Q T0558 173 -GQLLNSVK-------LSGTPFSSAFLDNGDCLVACGD------------AHCFVQLNLESNRIVRRVNANDIEGVQLFF 232 (294)
Q Consensus 173 -g~~~~~~~-------~~~~~~~~~~~~~g~~~v~~~~------------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 232 (294)
+....... ....+..+.+.|++..+++++. ++.+.+||..+|+++..+...... .
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~i~d~~tg~~~~~l~~~~~~-----~ 402 (436)
T 3ei4_B 328 QWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESS-----G 402 (436)
T ss_dssp CSSSCSEEEECCCCCCTTSCCCCCEECSSSSCEEEECCCCTTSCCSSSCCCSCEEEECSSSCSEEEEECCTTTC-----S
T ss_pred CCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCC-----C
T ss_conf 99610578523466565442689999999999999976689717997179998999989999099999389978-----7
Q ss_pred CCCE-EECCCCCEEEE
Q ss_conf 4534-89389989998
Q T0558 233 VAQL-FPLQNGGLYIC 247 (294)
Q Consensus 233 ~~~~-~~~~~G~i~i~ 247 (294)
+... .+.++|++++.
T Consensus 403 v~~~~~fspdg~~las 418 (436)
T 3ei4_B 403 ISSLNEFNPMGDTLAS 418 (436)
T ss_dssp CCCEEEECSSSSSEEE
T ss_pred EEEEEEECCCCCEEEE
T ss_conf 8899999999999999
No 42
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.77 E-value=1.8e-15 Score=128.32 Aligned_cols=180 Identities=13% Similarity=0.116 Sum_probs=130.3
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCC---EEEEE
Q ss_conf 776314878737875899970589799998568958899970677677667400899969989999974698---89999
Q T0558 93 AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS---EVREI 169 (294)
Q Consensus 93 ~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~---~i~~~ 169 (294)
+...+.+++++||| ++++++.|+.+.+|+..+++.+..+.......+|...+++++|+|||++|++++.|+ .|++|
T Consensus 185 ~~~~~~~v~~s~dg-~lasgs~Dg~i~vwd~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D~t~~~i~lw 263 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 263 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEECCCC-EEEEEECCCCEEEEEECCCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 88856899977999-89999589859998611332111222100010446648898513677621103467752101330
Q ss_pred ECC-CCEEEEEE--------------CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCC
Q ss_conf 378-85889851--------------697348988734896899735898799998789859998448876411411345
Q T0558 170 APN-GQLLNSVK--------------LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVA 234 (294)
Q Consensus 170 d~~-g~~~~~~~--------------~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 234 (294)
|.. +..+.... +...+.++.++|+|+++++++.|+.|++||.++|+.+..+.+|.........
T Consensus 264 d~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~~s~dg~~l~S~s~D~~i~vWd~~~g~~~~~~~~h~~~i~~~~~-- 341 (397)
T 1sq9_A 264 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED-- 341 (397)
T ss_dssp ETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG--
T ss_pred CCCCCEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCC--
T ss_conf 144560011003566564310221023587663478897772588759997999999999799998786876027732--
Q ss_pred CEEECCCCCE------EEEEC--CCCEEECCCCCCCEEEEECCCCCEEE
Q ss_conf 3489389989------99804--67714302477756999908998999
Q T0558 235 QLFPLQNGGL------YICNW--QGHDREAGKGKHPQLVEIDSEGKVVW 275 (294)
Q Consensus 235 ~~~~~~~G~i------~i~~~--~~~~~~~~~~~~~~~~~i~~~G~~vW 275 (294)
...+.++|.. .-..+ .+............+++...++.+.|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 390 (397)
T 1sq9_A 342 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 390 (397)
T ss_dssp CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE
T ss_pred EEEECCCCCEEEECCCCEEEECCCCCEEECCCCCCCEEEEEEECCCEEE
T ss_conf 7899999999997323579987678554002588996999993995899
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta- propeller, PKD superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei s-6} SCOP: b.1.3.1 b.69.2.3
Probab=99.76 E-value=9.3e-13 Score=108.57 Aligned_cols=190 Identities=13% Similarity=0.163 Sum_probs=111.7
Q ss_pred CEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEE-E--CCEEEEEECCCCCEEEEECCCCCCEEEE
Q ss_conf 589997479869999887882999994499873116479079839984-1--8828997526770367723777631487
Q T0558 24 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-Y--SKGAKMITRDGRELWNIAAPAGCEMQTA 100 (294)
Q Consensus 24 ~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s-~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 100 (294)
.+.++++.+++|.+||.++++++++++++ ..++.++++|||++++. . ++.+++||...+++.+....+ ..+..+
T Consensus 3 y~yVt~~~~~~V~viD~~t~~~v~~i~~g--~~p~~va~spDG~~l~vs~~~~~~V~v~D~~tg~~v~~~~~~-~~p~~~ 79 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-SSPQGV 79 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-SSEEEE
T ss_pred EEEEEECCCCEEEEEECCCCEEEEEEECC--CCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEECC-CCCEEE
T ss_conf 99999899998999999999699999999--980699996997999999799998999999999699999589-996688
Q ss_pred EECCCCCEEEEEEC-CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEE-EEEECCCEEEEEECC-CCEEE
Q ss_conf 87378758999705-8979999856895889997067767766740089996998999-997469889999378-85889
Q T0558 101 RILPDGNALVAWCG-HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYL-VPLFATSEVREIAPN-GQLLN 177 (294)
Q Consensus 101 ~~~~dg~~l~~~s~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i-~~g~~d~~i~~~d~~-g~~~~ 177 (294)
.+.+++..++..+. +..+.+++..+++..+.+.... ....+.+++||..+ ++...++.+.+|+.. +...+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~dg~~~~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-------SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCC-------CEEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEE
T ss_conf 9879998799951663179997425772758960145-------237999974998899953788279999648981788
Q ss_pred EEECCCEEEEEEEECCCCEEEEC-CCCCEEEEEECCCCEEEEEECCC
Q ss_conf 85169734898873489689973-58987999987898599984488
Q T0558 178 SVKLSGTPFSSAFLDNGDCLVAC-GDAHCFVQLNLESNRIVRRVNAN 223 (294)
Q Consensus 178 ~~~~~~~~~~~~~~~~g~~~v~~-~~~~~i~~~d~~~g~~~~~~~~~ 223 (294)
.......+....+.+++..++.. ..++.+.+++..++++.......
T Consensus 153 ~~~~~~~~~~~~~s~d~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 199 (391)
T 1l0q_A 153 TVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE 199 (391)
T ss_dssp EEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred EECCCCCCEEEEEECCCCEEEEEECCCEEEEEEECCCCCEEEEEECC
T ss_conf 84689984289993489814764123037999972688087998159
No 44
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.1e-14 Score=122.59 Aligned_cols=158 Identities=9% Similarity=0.018 Sum_probs=124.8
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEE-----
Q ss_conf 001478885899974798699998878829999944998731164790798399841--8828997526770367-----
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWN----- 88 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~----- 88 (294)
.+++++++ .|++++.|+.|.+||.++++++.++.. ...+.+++++|++++++++ ++.+++|+.+...+..
T Consensus 63 ~L~F~~dg-~Lvs~~~d~~I~vWdl~t~~~l~~~~~--~~~It~l~~s~~~~~l~~G~~dG~V~vwdl~~~~~~~~~i~~ 139 (902)
T 2oaj_A 63 EMRFVKGI-YLVVINAKDTVYVLSLYSQKVLTTVFV--PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDN 139 (902)
T ss_dssp EEEEETTT-EEEEEETTCEEEEEETTTCSEEEEEEC--SSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECC
T ss_pred EEEECCCC-EEEEEECCCCEEEEECCCCCEEEEECC--CCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEECCC
T ss_conf 99991899-799999979299998999949999759--998899999799899999928895999999899704302045
Q ss_pred ------EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC------------CCCCCCCCCCEEEE
Q ss_conf ------723777631487873787589997058979999856895889997067------------76776674008999
Q T0558 89 ------IAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFET------------GIERPHAQFRQINK 150 (294)
Q Consensus 89 ------~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~------------~~~~~~~~~~~~~~ 150 (294)
...+|...+.+++|+|++...+..+.++++++|+..+++.+..+.... ....+...+.++.|
T Consensus 140 ~~~~~~~~~~h~~~V~~i~~~P~d~~~lli~~~~g~vlwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 219 (902)
T 2oaj_A 140 LQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp HHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEEEEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 30001124678898899998689997899988997899998899789999502455566776332103477778899999
Q ss_pred CCCCCEEEEEECCCEEEEEECC-CCEE
Q ss_conf 6998999997469889999378-8588
Q T0558 151 NKKGNYLVPLFATSEVREIAPN-GQLL 176 (294)
Q Consensus 151 s~dG~~i~~g~~d~~i~~~d~~-g~~~ 176 (294)
+|||++|++++.||.+++||.+ +..+
T Consensus 220 spdG~~lvTg~~DGsi~lWd~~~g~~~ 246 (902)
T 2oaj_A 220 HPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp CTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred CCCCCEEEEEECCCEEEEEECCCCCEE
T ss_conf 899999999917997998547999676
No 45
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.76 E-value=2.2e-14 Score=120.46 Aligned_cols=263 Identities=10% Similarity=0.054 Sum_probs=174.9
Q ss_pred CCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCE
Q ss_conf 78885899974798699998878829999944998731164790798399841--8828997526770367723777631
Q T0558 20 SSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEM 97 (294)
Q Consensus 20 s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v 97 (294)
+.++++|++|+.|++|++||.++++.+..+. +|...+.++++ |+++|+++ |+.+++|+....+.......+....
T Consensus 140 ~~dg~~l~sgs~Dg~I~vwd~~t~~~~~~~~-gH~~~V~~l~~--~~~~l~sgs~Dg~i~vwd~~~~~~~~~~~~~~~~~ 216 (435)
T 1p22_A 140 QYDDQKIVSGLRDNTIKIWDKNTLECKRILT-GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV 216 (435)
T ss_dssp ECCSSEEEEEESSSCEEEEESSSCCEEEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCE
T ss_pred EECCCEEEEEECCCEEEEEECCCCCEEEEEC-CCCCCEEEEEE--CCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEE
T ss_conf 8629999999489909999899992999982-78897899997--79999999379847873057775321013555325
Q ss_pred EEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEE
Q ss_conf 487873787589997058979999856895889997067767766740089996998999997469889999378-8588
Q T0558 98 QTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 176 (294)
Q Consensus 98 ~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~ 176 (294)
.. +.+.+..++++..+.....++................ .........+...+..+..++.++.|+.. +...
T Consensus 217 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 289 (435)
T 1p22_A 217 LH--LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-----RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV 289 (435)
T ss_dssp EE--EECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCC-----SSCEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred EE--EECCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCC-----CCEEEEEEECCCCEEEECCCCEEEEEECCCCCEE
T ss_conf 66--5214211577503665300013433100011112577-----5405777513531244137860687425887324
Q ss_pred EEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEE--CCCCCEEEEECCCC--
Q ss_conf 98516973489887348968997358987999987898599984488764114113453489--38998999804677--
Q T0558 177 NSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFP--LQNGGLYICNWQGH-- 252 (294)
Q Consensus 177 ~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~G~i~i~~~~~~-- 252 (294)
........ .......++..+++++.++.+.++|..+++.+.....+......+.+.+.... ..||.+.+|+....
T Consensus 290 ~~~~~~~~-~~~~~~~~~~~l~s~~~d~~i~l~d~~~~~~~~~~~~h~~~V~~v~~~~~~l~sgs~Dg~I~vWdl~~~~~ 368 (435)
T 1p22_A 290 RTLNGHKR-GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALD 368 (435)
T ss_dssp EEEECCSS-CEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTS
T ss_pred EEEECCCC-CCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCC
T ss_conf 55302445-42112477753675126652277431678354553277886699996699999997989499998878865
Q ss_pred --------EEECCCC----------CCCEEEEECCCCCE-EEEEECCCCEEEEEEEEEEC
Q ss_conf --------1430247----------77569999089989-99983588537888621104
Q T0558 253 --------DREAGKG----------KHPQLVEIDSEGKV-VWQLNDKVKFGMISTICPIR 293 (294)
Q Consensus 253 --------~~~~~~~----------~~~~~~~i~~~G~~-vW~~~~~~~~~~i~~~~~~~ 293 (294)
......+ ....++.-..||.+ +|++.+.+......-.+|.|
T Consensus 369 ~~~~~~~~~~~~l~~H~~~V~~l~~d~~~lvS~s~Dg~I~vWD~~~~~~~~~~~~~~p~~ 428 (435)
T 1p22_A 369 PRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSR 428 (435)
T ss_dssp TTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC-----------------
T ss_pred CCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 556677545578468899889999709999999269969999699994344689999984
No 46
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.76 E-value=5.8e-15 Score=124.65 Aligned_cols=195 Identities=14% Similarity=0.048 Sum_probs=127.6
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCE-------EEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCC---
Q ss_conf 0147888589997479869999887882-------9999944998731164790798399841--882899752677---
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKE-------IVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGR--- 84 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~-------~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~--- 84 (294)
.+.++++++|++|+.|++|++||..++. .+..+ .+|...+.+++|+|++.+++++ ++.+++|+....
T Consensus 64 v~~sp~~~~l~sg~~Dg~i~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~ 142 (330)
T 2hes_X 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE 142 (330)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC
T ss_pred EEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEE-CCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCC
T ss_conf 9995999999999079979996546675312354166897-078898899998689970125504654202553878753
Q ss_pred -CEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC--EEEEEE
Q ss_conf -03677237776314878737875899970589799998568958899970677677667400899969989--999974
Q T0558 85 -ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN--YLVPLF 161 (294)
Q Consensus 85 -~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~--~i~~g~ 161 (294)
........+...+..+.++|+++++++++.++.+.+|+...++....... ..+...++++.++|++. ++++++
T Consensus 143 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~ 218 (330)
T 2hes_X 143 YECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL----NGHEGTVWSSDFDKTEGVFRLCSGS 218 (330)
T ss_dssp CEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE----CCCSSCEEEEEECCSSSSCEEEEEE
T ss_pred CEEEEECCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCEEEEE----CCCCCCCEEEEEECCCCCCCEEEEC
T ss_conf 111011057776288874067521347424887799998876762000342----3778984479990589955115445
Q ss_pred CCCEEEEEECCC-----CEEEEE------ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 698899993788-----588985------16973489887348968997358987999987898599
Q T0558 162 ATSEVREIAPNG-----QLLNSV------KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV 217 (294)
Q Consensus 162 ~d~~i~~~d~~g-----~~~~~~------~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~ 217 (294)
.|+.|++|+... ...+.. .+...+.++.++|++ .+++++.++.+.+||..+++..
T Consensus 219 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~h~~~i~~v~~s~~~-~i~t~~~dg~i~~wd~~~~~~~ 284 (330)
T 2hes_X 219 DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWK 284 (330)
T ss_dssp TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEE
T ss_pred CCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCC-CEEEEECCCEEEEEECCCCCEE
T ss_conf 89989999778986554311101001123347764000365899-6899979998999999999487
No 47
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform...; PP2A, holoenzyme, PR55, acetylation, polymorphism, WD repeat, cytoplasm, hydrolase, iron, manganese, metal- binding, methylation; HET: ADD; 2.85A {Homo sapiens}
Probab=99.76 E-value=1.3e-15 Score=129.30 Aligned_cols=197 Identities=10% Similarity=0.037 Sum_probs=130.6
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEEC----------C------------CCCCCCEEEEECCC--CEEE-
Q ss_conf 001478885899974798699998878829999944----------9------------98731164790798--3998-
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPL----------E------------KGWECNSVAATKAG--EILF- 70 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~----------~------------~~~~~~~~~~~pdG--~~l~- 70 (294)
.+++|+++++|++|+.+++|.+||.++++.+..... . +...+..+++.|++ ..++
T Consensus 33 ~vaFSpdG~~LAtG~~dg~V~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~~~~I~~v~w~~~~~~~~l~~ 112 (447)
T 3dw8_B 33 TVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLL 112 (447)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEE
T ss_pred EEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEE
T ss_conf 99998999999998299989999908995111013578723699984588866278604689888999835899878999
Q ss_pred -EECCEEEEEECCCCCE----------------------------------------EEEECCCCCCEEEEEECCCCCEE
Q ss_conf -4188289975267703----------------------------------------67723777631487873787589
Q T0558 71 -SYSKGAKMITRDGREL----------------------------------------WNIAAPAGCEMQTARILPDGNAL 109 (294)
Q Consensus 71 -s~~~~v~~~~~~~~~~----------------------------------------~~~~~~~~~~v~~~~~~~dg~~l 109 (294)
+.|+.+++|+...... ..+..+|...+.+++|+|||+++
T Consensus 113 ~s~D~tiklWdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~sv~~s~dg~~l 192 (447)
T 3dw8_B 113 STNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETY 192 (447)
T ss_dssp EECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEE
T ss_pred EECCCCEEEEECCCCCCEEEECCCCCCCCEEEECCCCCCCEEEECCCCCEEEECCEEEEECCCCCCCEEEEEECCCCCEE
T ss_conf 92899279975233651367024676564387104688702660258756997107888214246977899988999999
Q ss_pred EEEECCCCEEEEECCCCCEEEEEE--CCCCCCCCCCCCCEEEECCCC-CEEEEEECCCEEEEEECC-CCEE----EEE--
Q ss_conf 997058979999856895889997--067767766740089996998-999997469889999378-8588----985--
Q T0558 110 VAWCGHPSTILEVNMKGEVLSKTE--FETGIERPHAQFRQINKNKKG-NYLVPLFATSEVREIAPN-GQLL----NSV-- 179 (294)
Q Consensus 110 ~~~s~~~~~~~~~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~s~dG-~~i~~g~~d~~i~~~d~~-g~~~----~~~-- 179 (294)
++ +.|..+.+|+..+++...... .......+...++++.++|++ .++++++.|++|++||.. +... ..+
T Consensus 193 ~s-s~D~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~~~gs~dg~i~iwd~~~~~~~~~~~~~~~~ 271 (447)
T 3dw8_B 193 LS-ADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEE 271 (447)
T ss_dssp EE-ECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECC
T ss_pred EE-CCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEC
T ss_conf 99-37998999864012000000000022002455506899997179845887648996999858767524302588733
Q ss_pred -----------ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCC
Q ss_conf -----------16973489887348968997358987999987898
Q T0558 180 -----------KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN 214 (294)
Q Consensus 180 -----------~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g 214 (294)
.+...+.++.++|+|+++++++ ++.+.+||.++.
T Consensus 272 ~~~~~~~~~~~~h~~~i~~v~fspdg~~l~s~s-d~~i~iWd~~~~ 316 (447)
T 3dw8_B 272 PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-YLSVKVWDLNME 316 (447)
T ss_dssp C-----CCHHHHHTTCEEEEEECTTSSEEEEEE-SSEEEEEETTCC
T ss_pred CCCCCEEEEECCCCCCEEEEEECCCCCEEEEEC-CCEEEEEECCCC
T ss_conf 667610056627778789888559987899971-996999985589
No 48
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform...; PP2A, holoenzyme, PR55, acetylation, polymorphism, WD repeat, cytoplasm, hydrolase, iron, manganese, metal- binding, methylation; HET: ADD; 2.85A {Homo sapiens}
Probab=99.75 E-value=1.6e-15 Score=128.71 Aligned_cols=199 Identities=9% Similarity=0.051 Sum_probs=144.2
Q ss_pred CCCCCEEEEECCCCEEEEEECCCCEEEE---------------------------------------EEECCCCCCCCEE
Q ss_conf 7888589997479869999887882999---------------------------------------9944998731164
Q T0558 20 SSPQHLLVGGSGWNKIAIINKDTKEIVW---------------------------------------EYPLEKGWECNSV 60 (294)
Q Consensus 20 s~~~~~l~~gs~~~~i~~~d~~tg~~~w---------------------------------------~~~~~~~~~~~~~ 60 (294)
.....++++++.|++|++||..+++..- .+..+|...+.++
T Consensus 104 ~~~~~~l~~~s~D~tiklWdv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~sv 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCEEEECCCCCCCEEEECCCCCEEEECCEEEEECCCCCCCEEEE
T ss_conf 89987899992899279975233651367024676564387104688702660258756997107888214246977899
Q ss_pred EEECCCCEEEEE-CCEEEEEECCCCCEE-EE-------ECCCCCCEEEEEECCCCC-EEEEEECCCCEEEEECCCCCEEE
Q ss_conf 790798399841-882899752677036-77-------237776314878737875-89997058979999856895889
Q T0558 61 AATKAGEILFSY-SKGAKMITRDGRELW-NI-------AAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMKGEVLS 130 (294)
Q Consensus 61 ~~~pdG~~l~s~-~~~v~~~~~~~~~~~-~~-------~~~~~~~v~~~~~~~dg~-~l~~~s~~~~~~~~~~~~G~~~~ 130 (294)
+|+|||++|+++ |+.+++|+....... .. ..++...+.+++++|++. ++++++.|+.+.+|+.+.+....
T Consensus 184 ~~s~dg~~l~ss~D~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~~~gs~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 184 SINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp EECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EECCCCCEEEECCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCC
T ss_conf 98899999999379989998640120000000000220024555068999971798458876489969998587675243
Q ss_pred ----EE------ECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC--CCEEEEEECC----------------
Q ss_conf ----99------7067767766740089996998999997469889999378--8588985169----------------
Q T0558 131 ----KT------EFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN--GQLLNSVKLS---------------- 182 (294)
Q Consensus 131 ----~~------~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~--g~~~~~~~~~---------------- 182 (294)
.+ .......++...+..+.|+|||++|++++ |++|++||.. ++.+......
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~h~~~i~~v~fspdg~~l~s~s-d~~i~iWd~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-YLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-SSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred CEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEC-CCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCC
T ss_conf 02588733667610056627778789888559987899971-99699998558982157884035557712015645533
Q ss_pred CEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 7348988734896899735898799998789859998
Q T0558 183 GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRR 219 (294)
Q Consensus 183 ~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~ 219 (294)
....++.++|+|+++++++.|+.|++||.++++....
T Consensus 343 ~~~~~~~~spdg~~l~tgs~D~~i~iWd~~~~~~~~l 379 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITL 379 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEE
T ss_pred CCCEEEEECCCCCEEEEEECCCEEEEEECCCCCCEEE
T ss_conf 4306999989999999980899799999999970698
No 49
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.75 E-value=7.8e-14 Score=116.42 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=108.5
Q ss_pred CCCC-EEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE---CCEEEEEECCCCCEEEEECCCCCC
Q ss_conf 8885-899974798699998878829999944998731164790798399841---882899752677036772377763
Q T0558 21 SPQH-LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY---SKGAKMITRDGRELWNIAAPAGCE 96 (294)
Q Consensus 21 ~~~~-~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~~~~~~~~~~~~~~~~ 96 (294)
++++ +++++..+++|.+||.+|++++.+++.. +..+..++++|||++++.. ++.+.+||........... ....
T Consensus 178 PDg~~LyVa~~~~~~V~v~D~~Tg~~i~~i~~~-G~~P~~va~spdG~~lyVa~~~~~~V~viD~~t~~~v~~i~-~~~~ 255 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLT-GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD-KIGL 255 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS-SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC-CCSE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCCEEEEEECC-CCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEC-CCCC
T ss_conf 899999999799998999999999599999556-89856999981357799974389989999999994999987-8998
Q ss_pred EEEEEECCCCCEEEEEEC--------CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEE-EEECCCEEE
Q ss_conf 148787378758999705--------89799998568958899970677677667400899969989999-974698899
Q T0558 97 MQTARILPDGNALVAWCG--------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLV-PLFATSEVR 167 (294)
Q Consensus 97 v~~~~~~~dg~~l~~~s~--------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~-~g~~d~~i~ 167 (294)
+..++++|||++++++.. ...+.+++..+++.+....... ....+.++|+++.++ +...++.|.
T Consensus 256 P~gia~spDG~~lyVa~~~~~~~~~~~~~v~ViD~~t~~~~~~i~~~~-------~p~~i~~~~d~~~lyVt~~~~~~V~ 328 (433)
T 3bws_A 256 PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG-------NKRHIVSGNTENKIYVSDMCCSKIE 328 (433)
T ss_dssp EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE-------CEEEEEECSSTTEEEEEETTTTEEE
T ss_pred CCEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCEEECCCCC-------CCEEEEEEEECCCEEEEECCCCCEE
T ss_conf 207998776560169616755334689748999788783014114578-------8405887520231021000268525
Q ss_pred EEECC-CCEEEEEECCCEEEEEEEECCCCEEEECCCC---------------CEEEEEECCCCEEEEEECCCCCCCEEEC
Q ss_conf 99378-8588985169734898873489689973589---------------8799998789859998448876411411
Q T0558 168 EIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDA---------------HCFVQLNLESNRIVRRVNANDIEGVQLF 231 (294)
Q Consensus 168 ~~d~~-g~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~---------------~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 231 (294)
+||.. ++.+.....+..|.+++++|+|+++++...+ +.+.++|..++++..++....
T Consensus 329 viD~~t~~v~~~i~~g~~P~~ia~spDG~~LyVa~~~~~~~~~~~~~~~~~~~~V~vID~~t~~v~~~i~vG~------- 401 (433)
T 3bws_A 329 VYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN------- 401 (433)
T ss_dssp EEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS-------
T ss_pred EECCCCCEEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEECCC-------
T ss_conf 5216764167753158983279993899999999468982023310367767559999999982998870799-------
Q ss_pred CCCCEEECCCCC-EEEEECCC
Q ss_conf 345348938998-99980467
Q T0558 232 FVAQLFPLQNGG-LYICNWQG 251 (294)
Q Consensus 232 ~~~~~~~~~~G~-i~i~~~~~ 251 (294)
.+.++.+.+||+ +++.++..
T Consensus 402 ~P~gva~spDG~~lyVsn~~d 422 (433)
T 3bws_A 402 QPTGLDVSPDNRYLVISDFLD 422 (433)
T ss_dssp SEEEEEECTTSCEEEEEETTT
T ss_pred CEEEEEEECCCCEEEEEECCC
T ss_conf 765899958989999998999
No 50
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-BOX; WD40 domains, double phosphorylation, transcription/cell cycle complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.74 E-value=1.9e-13 Score=113.58 Aligned_cols=228 Identities=10% Similarity=0.013 Sum_probs=149.5
Q ss_pred CCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCC
Q ss_conf 1478885899974798699998878829999944998731164790798399841--88289975267703677237776
Q T0558 18 QGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGC 95 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~ 95 (294)
..+.++++|++|+.|++|++||..+++.+.++. +|...+.+++++|+ +++++ |+.+++|+...........++..
T Consensus 124 ~~~~dg~~l~sgs~D~~i~iw~~~~~~~~~~l~-gH~~~v~~~~~~~~--~l~sgs~Dg~i~iWd~~~~~~~~~~~~~~~ 200 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTS 200 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEECC-CCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EEEECCCEEEEEECCCEEEEEECCCCCEEEEEE-CCCCCEEEEEECCC--EEEEEECCCEEEEEECCCCCEEEEEECCCE
T ss_conf 998784999999089909999999994899993-78998899972789--999995899399944678838899944530
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCC--------------------------------CCCC
Q ss_conf 31487873787589997058979999856895889997067767--------------------------------7667
Q T0558 96 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIE--------------------------------RPHA 143 (294)
Q Consensus 96 ~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~--------------------------------~~~~ 143 (294)
.+..... .....++.+.+....+++..+++............ ....
T Consensus 201 ~~~~~~~--~~~~~~s~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~ 278 (445)
T 2ovr_B 201 TVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 278 (445)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCC
T ss_pred EEEECCC--CCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCCEECCCCCCEEEECCCCCEEEEEECCCCCEEEEEECC
T ss_conf 3540013--56403554056522777538884334431034531000368861320368731786303677168996147
Q ss_pred CCCEEEECCCCCEEEEEECCCEEEEEECCCCEE-EEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECC
Q ss_conf 400899969989999974698899993788588-9851697348988734896899735898799998789859998448
Q T0558 144 QFRQINKNKKGNYLVPLFATSEVREIAPNGQLL-NSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA 222 (294)
Q Consensus 144 ~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~-~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~ 222 (294)
........+++..+++++.|+.|++||...... .....+.. ....+.++++.+++++.++.+.+||.++++.+..+..
T Consensus 279 ~~~~~~~~~~~~~l~~~s~d~~i~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~l~sg~~dg~i~i~d~~~~~~~~~~~~ 357 (445)
T 2ovr_B 279 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQG 357 (445)
T ss_dssp SSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCS-CEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECS
T ss_pred CCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCEECCCCCC-CCEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEEC
T ss_conf 776168704898778763998699974467741000147777-5140147899999980896799876689947799846
Q ss_pred C---CCCCEEECCCCCEEE--CCCCCEEEEECCC
Q ss_conf 8---764114113453489--3899899980467
Q T0558 223 N---DIEGVQLFFVAQLFP--LQNGGLYICNWQG 251 (294)
Q Consensus 223 ~---~~~~~~~~~~~~~~~--~~~G~i~i~~~~~ 251 (294)
. ......+.+.+.... ..||.+.+|+...
T Consensus 358 ~~~h~~~V~~~~~~~~~l~s~s~Dg~I~iWd~~t 391 (445)
T 2ovr_B 358 PNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp TTSCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred CCCCCCCEEEEEECCCEEEEEECCCEEEEEECCC
T ss_conf 7887687899995499999995899799998999
No 51
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.74 E-value=3.3e-13 Score=111.88 Aligned_cols=197 Identities=13% Similarity=0.077 Sum_probs=149.9
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCC---EEEEECCCCCC
Q ss_conf 885899974798699998878829999944998731164790798399841--8828997526770---36772377763
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRE---LWNIAAPAGCE 96 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~---~~~~~~~~~~~ 96 (294)
..-++++..++++|.+||.+|+|++.+++. +..++.++|+|||+++++. |+.+.+||..... +.+...+ ..
T Consensus 166 ~~l~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~~~~v~fSpDGr~lyv~srDg~v~~iDl~t~k~~~v~~i~~g--~~ 241 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG--SE 241 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC--SE
T ss_pred CCEEEEEECCCCEEEEEECCCCCEEEEECC--CCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCEEEEEEECC--CC
T ss_conf 755999972698799998999848898038--98732599868999799961689579999427973278864037--88
Q ss_pred EEEEEECC----CCCEEEEEEC-CCCEEEEECCCCCEEEEEECCCCC-----CCCCCCCCEEEECCCCCEEEEEEC-CCE
Q ss_conf 14878737----8758999705-897999985689588999706776-----776674008999699899999746-988
Q T0558 97 MQTARILP----DGNALVAWCG-HPSTILEVNMKGEVLSKTEFETGI-----ERPHAQFRQINKNKKGNYLVPLFA-TSE 165 (294)
Q Consensus 97 v~~~~~~~----dg~~l~~~s~-~~~~~~~~~~~G~~~~~~~~~~~~-----~~~~~~~~~~~~s~dG~~i~~g~~-d~~ 165 (294)
...++++| ||+++++++. +.++.+|+..+++++......... ..+.....++.+++|++.+++... .+.
T Consensus 242 ~~~ia~S~~~s~DGk~l~v~n~~~~tv~v~D~~t~~~~~~i~~~~~~v~~~~~~~~~r~~av~~s~d~~~~vva~kdtg~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CCCEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCE
T ss_conf 77558786537888889999446994999989989624798558864344220678750247876999989999803897
Q ss_pred EEEEECCC-C--EEEEEECCCEEEEEEEECCCCEE-EECCCCCEEEEEECCCCEEEEEECC
Q ss_conf 99993788-5--88985169734898873489689-9735898799998789859998448
Q T0558 166 VREIAPNG-Q--LLNSVKLSGTPFSSAFLDNGDCL-VACGDAHCFVQLNLESNRIVRRVNA 222 (294)
Q Consensus 166 i~~~d~~g-~--~~~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~i~~~d~~~g~~~~~~~~ 222 (294)
|.++|... + ..........+++..+.++|+++ ++...++.+.++|.++++++..+..
T Consensus 322 I~~vD~~~~~~l~v~~i~~~~~~~d~~~dpdgr~~~va~~~~~~v~viD~~~~~~va~i~~ 382 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCCCCEEEEECCCCCCCCCEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEEC
T ss_conf 9999786676640588425666675108898887897716898589993456668898642
No 52
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta- propeller, PKD superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei s-6} SCOP: b.1.3.1 b.69.2.3
Probab=99.74 E-value=4.1e-13 Score=111.18 Aligned_cols=196 Identities=16% Similarity=0.181 Sum_probs=116.9
Q ss_pred CCCCCCCCE-EEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE---CCEEEEEECCCCCEEEEECC
Q ss_conf 014788858-99974798699998878829999944998731164790798399841---88289975267703677237
Q T0558 17 AQGSSPQHL-LVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY---SKGAKMITRDGRELWNIAAP 92 (294)
Q Consensus 17 ~~~s~~~~~-l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~~~~~~~~~~~~ 92 (294)
++.++++++ +++++.+++|.+||.++++++++++.+ ..+..+++.+++..++.. ++.+++|+...........
T Consensus 37 va~spDG~~l~vs~~~~~~V~v~D~~tg~~v~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 113 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG--SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK- 113 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-
T ss_pred EEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEECC--CCCEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEEE-
T ss_conf 9996997999999799998999999999699999589--9966889879998799951663179997425772758960-
Q ss_pred CCCCEEEEEECCCCCEEEE-EECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEC-CCEEEEEE
Q ss_conf 7763148787378758999-705897999985689588999706776776674008999699899999746-98899993
Q T0558 93 AGCEMQTARILPDGNALVA-WCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-TSEVREIA 170 (294)
Q Consensus 93 ~~~~v~~~~~~~dg~~l~~-~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~-d~~i~~~d 170 (294)
....+..+.+.|++..++. ...+..+.+|+..+++..+...... ....+.++||+..+++... ++.+++||
T Consensus 114 ~~~~~~~v~~~~dg~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~s~d~~~~~~~~~~~~~v~~~d 186 (391)
T 1l0q_A 114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-------SPKGIAVTPDGTKVYVANFDSMSISVID 186 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-------SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEECCCC-------CCEEEEEECCCCEEEEEECCCEEEEEEE
T ss_conf 145237999974998899953788279999648981788846899-------8428999348981476412303799997
Q ss_pred CC-CCEEEEEECCCEEEEEEEECCCCEEEECC---CCCEEEEEECCCCEEEEEECC
Q ss_conf 78-85889851697348988734896899735---898799998789859998448
Q T0558 171 PN-GQLLNSVKLSGTPFSSAFLDNGDCLVACG---DAHCFVQLNLESNRIVRRVNA 222 (294)
Q Consensus 171 ~~-g~~~~~~~~~~~~~~~~~~~~g~~~v~~~---~~~~i~~~d~~~g~~~~~~~~ 222 (294)
.. ++.......+..+.+..++++|+.++.+. ..+.+.++|..++++++.+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~~~v~v~D~~t~~~~~~~~~ 242 (391)
T 1l0q_A 187 TVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV 242 (391)
T ss_dssp TTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECC
T ss_conf 26880879981599623788889999999995789999999999999909999827
No 53
>3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.8e-14 Score=120.99 Aligned_cols=191 Identities=12% Similarity=0.049 Sum_probs=135.2
Q ss_pred CCCCCEEEEECCCCEEEEEECCCCEEEEEEE-CCCCCCCCEEEEECC--CCEEEEE--CCEEEEEECCCCCE-E-EEECC
Q ss_conf 7888589997479869999887882999994-499873116479079--8399841--88289975267703-6-77237
Q T0558 20 SSPQHLLVGGSGWNKIAIINKDTKEIVWEYP-LEKGWECNSVAATKA--GEILFSY--SKGAKMITRDGREL-W-NIAAP 92 (294)
Q Consensus 20 s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~-~~~~~~~~~~~~~pd--G~~l~s~--~~~v~~~~~~~~~~-~-~~~~~ 92 (294)
++++++|++|+.|++|++||..+++...... .+|...+.+++|+|+ |.+|+++ |+.+++|+...... . ....+
T Consensus 64 ~~d~~~LaSgs~Dg~I~vWD~~t~~~~~~~~~~~h~~~V~sl~fsp~~~~~~l~sgs~Dg~V~lwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 64 PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp TTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC
T ss_pred CCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECC
T ss_conf 89989999993899299998999976888985488898889998039999999999789939999887997566677306
Q ss_pred CCCCEEEEEECC-------------CCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCC---CCE
Q ss_conf 776314878737-------------8758999705897999985689588999706776776674008999699---899
Q T0558 93 AGCEMQTARILP-------------DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK---GNY 156 (294)
Q Consensus 93 ~~~~v~~~~~~~-------------dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~d---G~~ 156 (294)
+...+.++.|+| +++++++++.|+.+.+|+.+++...+..... ..++...+.++.++|| +++
T Consensus 144 ~~~~v~~v~~~p~~~~~~~~~~~~~~~~~l~sgs~dg~I~iwdl~~~~~~~~~~~~--l~~h~~~i~sv~~~pd~~~~~~ 221 (753)
T 3jro_A 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST--LEGHSDWVRDVAWSPTVLLRSY 221 (753)
T ss_dssp CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE--ECCCSSCEEEEEECCCCSSSEE
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEECCC--CCCCCCCCEEEEECCCCCCCCE
T ss_conf 77865789966765554421112789998999937997999977799742010121--1366899604998778998978
Q ss_pred EEEEECCCEEEEEECCCC---EEEE----EECCCEEEEEEEECCCCEEEECCCCCEEEEEECC
Q ss_conf 999746988999937885---8898----5169734898873489689973589879999878
Q T0558 157 LVPLFATSEVREIAPNGQ---LLNS----VKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 212 (294)
Q Consensus 157 i~~g~~d~~i~~~d~~g~---~~~~----~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~ 212 (294)
|++++.|+.|++|+.+.. .... ..+...+.++.++|+|+++++++.|+.|++|+..
T Consensus 222 l~sgs~Dg~I~iw~~~~~~~~~~~~l~~~~~h~~~I~~v~~spdg~~lasgs~DG~I~iW~~n 284 (753)
T 3jro_A 222 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEECCC
T ss_conf 999958994999954489883358975027888987999996998999999579969998459
No 54
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=3.6e-14 Score=118.90 Aligned_cols=223 Identities=9% Similarity=-0.023 Sum_probs=129.2
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEE-E--CCEEEEEECCCCCEEEEECC
Q ss_conf 00147888589997479869999887882999994499873116479079839984-1--88289975267703677237
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-Y--SKGAKMITRDGRELWNIAAP 92 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s-~--~~~v~~~~~~~~~~~~~~~~ 92 (294)
-.+.|+++++|++++.+++|.+||.+|++++.++++.++..+..++++|||++++. + ++.+++|+....+.......
T Consensus 4 g~a~s~~~~~l~~~~~~~~i~v~D~~t~~~~~~~~~~~~~~~~~v~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEEEC
T ss_conf 06778899899998589979999999998999999589996167999889899999989999699996667717876512
Q ss_pred CC------CCEEEEEECCCCCEEEEEEC------------CCCEEEEECCCCCEEEEEECCCCCCCCC------------
Q ss_conf 77------63148787378758999705------------8979999856895889997067767766------------
Q T0558 93 AG------CEMQTARILPDGNALVAWCG------------HPSTILEVNMKGEVLSKTEFETGIERPH------------ 142 (294)
Q Consensus 93 ~~------~~v~~~~~~~dg~~l~~~s~------------~~~~~~~~~~~G~~~~~~~~~~~~~~~~------------ 142 (294)
.. ..+..++++||++.+++.+. +..+.+++..+++...............
T Consensus 84 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYV 163 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEE
T ss_pred CCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCEEEEEE
T ss_conf 78765336674489997289879998258874046504688358989767895968987156897069970688049998
Q ss_pred ----------------------CCCCEEEECCC--------------------------CCEEEEEECCCEEEEEECC-C
Q ss_conf ----------------------74008999699--------------------------8999997469889999378-8
Q T0558 143 ----------------------AQFRQINKNKK--------------------------GNYLVPLFATSEVREIAPN-G 173 (294)
Q Consensus 143 ----------------------~~~~~~~~s~d--------------------------G~~i~~g~~d~~i~~~d~~-g 173 (294)
.....+.++|+ +..+.+...++.+..|+.. +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (349)
T 1jmx_B 164 AGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTG 243 (349)
T ss_dssp ESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTC
T ss_pred ECCCCEEEECCCCCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCEEEEECCEEECCCCCEEEECCCCCEEEEEEECCC
T ss_conf 05740222468884999996589743058666524146640588815765000000477502564057851799970678
Q ss_pred CEEEE--EECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEE
Q ss_conf 58898--51697348988734896899735898799998789859998448876411411345348938998999
Q T0558 174 QLLNS--VKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYI 246 (294)
Q Consensus 174 ~~~~~--~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i 246 (294)
..... .............+++.+++.+. ++.+.+||.++++.+..+.... .+.++.+.+||+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~t~~~~~~~~~~~-------~~~~va~S~DG~~l~ 310 (349)
T 1jmx_B 244 KTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDH-------TYYCVAFDKKGDKLY 310 (349)
T ss_dssp CEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSS-------CCCEEEECSSSSCEE
T ss_pred CEEEEEECCCCCCEEEEEECCCCCEEEEEC-CCEEEEEECCCCCEEEEECCCC-------CEEEEEECCCCCEEE
T ss_conf 445664048755136778618998899931-8989999999995999974899-------888999967999999
No 55
>2zkq_a 40S ribosomal protein RACK1; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.73 E-value=7.6e-14 Score=116.51 Aligned_cols=237 Identities=14% Similarity=0.040 Sum_probs=161.5
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCE-EEEECCC
Q ss_conf 01478885899974798699998878829999944998731164790798399841--88289975267703-6772377
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGREL-WNIAAPA 93 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~-~~~~~~~ 93 (294)
.+.+++++++++++.++.+..++....+....... .......+.+.|++..++++ |+.+++|+...... .....++
T Consensus 69 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~ 147 (317)
T 2zkq_a 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG-HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147 (317)
T ss_dssp EEECTTSSEEEEECTTCEEEEEESSSSSEEEEEEE-CCSSCEEEEEESSSSEEEEEETTTEEEEEETTTCCEEEEEECC-
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEC-CCCCEEEEEEECCCCEEEEECCCCCEEEECCCCCCEEEEEECCC
T ss_conf 99989998588860562699985057731257505-77853688860578614610578960450157772024550467
Q ss_pred CCCEEEEEECCCCC--EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEEC
Q ss_conf 76314878737875--8999705897999985689588999706776776674008999699899999746988999937
Q T0558 94 GCEMQTARILPDGN--ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 171 (294)
Q Consensus 94 ~~~v~~~~~~~dg~--~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~ 171 (294)
...+..++++|++. ++++++.+..+.+|+..+++...... .+...+.++.++|||+++++++.|+.+++|+.
T Consensus 148 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~s~~~d~~i~~~~~ 221 (317)
T 2zkq_a 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI------GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221 (317)
T ss_dssp CCEEEEEECTTCSSSSCEEEEETTSCEEEECTTTCSEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCCEEEEECCCCCCCEEEEECCCCEEEEEECCCCCEEEEEC------CCCCCEEEEEECCCCCEEEEECCCCCEEEEEC
T ss_conf 775136897238998789996499729998778882445533------78885578999789996787627896287203
Q ss_pred C-CCEEEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCE---EECCCCCEEECCCCCEEEE
Q ss_conf 8-85889851697348988734896899735898799998789859998448876411---4113453489389989998
Q T0558 172 N-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGV---QLFFVAQLFPLQNGGLYIC 247 (294)
Q Consensus 172 ~-g~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~G~i~i~ 247 (294)
. .+.+........+....+++++ .+++++.++.+.+||.+++.....+........ +...+..+.+.++|++++
T Consensus 222 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~- 299 (317)
T 2zkq_a 222 NEGKHLYTLDGGDIINALCFSPNR-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF- 299 (317)
T ss_dssp TTTEEEEEEESSCEEEEEECTTSS-EEEEEESSSCEEEEECCCSSSCCCCCCCEEEEEECCCSSCEEEEEECSSTTCEE-
T ss_pred CCCEEEEEECCCCEEEEECCCCCC-EEEEECCCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEE-
T ss_conf 666045885487158751158741-045524899799998999869886046510110268899889999989989999-
Q ss_pred ECCCCEEECCCCCCCEEEEECCCCCE-EEEEECC
Q ss_conf 04677143024777569999089989-9998358
Q T0558 248 NWQGHDREAGKGKHPQLVEIDSEGKV-VWQLNDK 280 (294)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~i~~~G~~-vW~~~~~ 280 (294)
.-+.||.+ +|++...
T Consensus 300 ------------------sgs~Dg~i~iWd~~tG 315 (317)
T 2zkq_a 300 ------------------AGYTDNLVRVWQVTIG 315 (317)
T ss_dssp ------------------EEETTBCEEEEC----
T ss_pred ------------------EEECCCEEEEEECCCC
T ss_conf ------------------9969997999869883
No 56
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B*
Probab=99.72 E-value=4.5e-14 Score=118.17 Aligned_cols=195 Identities=12% Similarity=-0.001 Sum_probs=86.2
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEEC-CCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEE
Q ss_conf 85899974798699998878829999944-998731164790798399841--882899752677036772377763148
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPL-EKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQT 99 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~-~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~ 99 (294)
...|++++.|++|++||.++....-.... .+...+.++.++|++.+++++ ++.+++|+..++.+.+. ..+...+.+
T Consensus 131 ~~~l~s~s~Dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sg~~dg~v~~wd~~~~~~~~~-~~h~~~v~~ 209 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKE-KLHKAKVTH 209 (383)
T ss_dssp EEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEE-ECSSSCEEE
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEEEEEEE-CCCCCCEEE
T ss_conf 9999999899909998645661158875137665079999889999999991899676641002457897-266897789
Q ss_pred EEECCCCCE-EEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECC-CCCEEEEEECCCEEEEEECC-CC-E
Q ss_conf 787378758-99970589799998568958899970677677667400899969-98999997469889999378-85-8
Q T0558 100 ARILPDGNA-LVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQ-L 175 (294)
Q Consensus 100 ~~~~~dg~~-l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~-dG~~i~~g~~d~~i~~~d~~-g~-~ 175 (294)
+.|+|++.. +++++.|+.+.+|+.++++....+.. ...+...+.++.|+| ||.+|++++.|+.|++||.. .. .
T Consensus 210 v~~~p~~~~l~~s~s~D~~v~iwd~~~~~~~~~~~~---~~~h~~~v~~v~fsp~~g~~l~t~s~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA---EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEE---EEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSC
T ss_pred EEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEE---EEECCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCC
T ss_conf 996788772999971588289998878875640688---85016815653533677715775469997999989998865
Q ss_pred EEEEEC------CCEEEEEEEECCCCEEEECC---------CCCEEEEEECCCCEEEEEEC
Q ss_conf 898516------97348988734896899735---------89879999878985999844
Q T0558 176 LNSVKL------SGTPFSSAFLDNGDCLVACG---------DAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 176 ~~~~~~------~~~~~~~~~~~~g~~~v~~~---------~~~~i~~~d~~~g~~~~~~~ 221 (294)
...... ...+....+.|++..+++++ .++.+.+||..+++++.++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~ 347 (383)
T 3ei3_B 287 DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLR 347 (383)
T ss_dssp SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEEC
T ss_pred EEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 0487415655511102798987999999999779987799589869999899991999994
No 57
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.72 E-value=3.8e-14 Score=118.67 Aligned_cols=199 Identities=13% Similarity=0.057 Sum_probs=129.0
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCE---EEEECC--C
Q ss_conf 8885899974798699998878829999944998731164790798399841--88289975267703---677237--7
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGREL---WNIAAP--A 93 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~---~~~~~~--~ 93 (294)
.++..+++.+++++|.+||.+|++++.+++.+ ..++.++|+|||+++++. |+.+.+||...... .+...+ +
T Consensus 147 ~~n~~~V~~~~~~~V~viD~~T~~vv~~~~~g--~~~h~v~fSpDGr~lyv~s~Dg~v~~~Dl~t~~~~~v~~i~~g~~~ 224 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG--YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEA 224 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECS--TTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCCEEEEEECC--CCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCC
T ss_conf 65449999888986999989999599998789--9843899768898799973899589998028984178986068888
Q ss_pred CCCEEEEEECCCCCEEEEEEC-CCCEEEEECCCCCEEEEEECCCCCCCC-----CCCCCEEEECCCCCE-EEEEECCCEE
Q ss_conf 763148787378758999705-897999985689588999706776776-----674008999699899-9997469889
Q T0558 94 GCEMQTARILPDGNALVAWCG-HPSTILEVNMKGEVLSKTEFETGIERP-----HAQFRQINKNKKGNY-LVPLFATSEV 166 (294)
Q Consensus 94 ~~~v~~~~~~~dg~~l~~~s~-~~~~~~~~~~~G~~~~~~~~~~~~~~~-----~~~~~~~~~s~dG~~-i~~g~~d~~i 166 (294)
...+.+..|+|||+++++++. +.++.+|+..++++++.+......... ...+..+..+++... +++....+.+
T Consensus 225 ~~i~~s~~fSpDGk~l~v~n~~~~tv~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~~~ai~~~~~~~~~~v~~~~~g~v 304 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred CCCEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCEE
T ss_conf 65330241689998899981689989999999996347862478775653506888246898616798899996468807
Q ss_pred EEEECC---CCEEEEEECCCEEEEEEEECCCCEE-EECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 999378---8588985169734898873489689-973589879999878985999844
Q T0558 167 REIAPN---GQLLNSVKLSGTPFSSAFLDNGDCL-VACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 167 ~~~d~~---g~~~~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
.+++.. ............+....++++|+++ +++..++.+.++|..+++++..+.
T Consensus 305 ~~vd~~~~~~~~v~~i~~~~~~~d~~fdpdGr~l~va~~~~n~v~ViD~~t~k~va~i~ 363 (543)
T 1nir_A 305 LLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp EEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCCCEEEEECCCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEE
T ss_conf 89980266641467865554430315888888899986889847778536781899870
No 58
>1nex_B CDC4 protein, SCCDC4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, ligase, cell cycle; HET: TPO; 2.70A {Saccharomyces cerevisiae} SCOP: a.158.1.1 b.69.4.1
Probab=99.72 E-value=8.5e-15 Score=123.42 Aligned_cols=221 Identities=8% Similarity=0.040 Sum_probs=153.2
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCC--CCEEEEECCCCEEEEE--CCEEEEEECCCCCEE---------
Q ss_conf 888589997479869999887882999994499873--1164790798399841--882899752677036---------
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE--CNSVAATKAGEILFSY--SKGAKMITRDGRELW--------- 87 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~--~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~--------- 87 (294)
+++.+|++|+.|++|.+||..+++.+..+.. +... +....+.+++.+++++ ++.+++|+.......
T Consensus 171 s~~~~l~sgs~Dg~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~s~~~~i~vw~~~~~~~~~~~~~~~~~ 249 (464)
T 1nex_B 171 AHGGILVSGSTDRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 249 (464)
T ss_dssp ETTTEEEEEETTCCEEEEETTTTEEEEEECC-CSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CC
T ss_pred CCCCEEEEEECCCCEEEEECCCCCEEEEEEC-CCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCEEE
T ss_conf 7999899997999478403788958899952-688606887513788644565258986999988988600224530122
Q ss_pred --------------EEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCC
Q ss_conf --------------772377763148787378758999705897999985689588999706776776674008999699
Q T0558 88 --------------NIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 153 (294)
Q Consensus 88 --------------~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~d 153 (294)
.....+.. ....+.++++.++.++.|..+..|+..+++.+..+. .+...+....+.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~------~~~~~v~~~~~~~~ 321 (464)
T 1nex_B 250 PLVFHTPEENPYFVGVLRGHMA--SVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS------GHTDRIYSTIYDHE 321 (464)
T ss_dssp CEEESCTTTCTTEEEEEECCSS--CEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEEETT
T ss_pred EEECCCCCCCCEEEEECCCCCC--EEEEEEECCCEEEEECCCCEEEEECCCCCCEEEEEC------CCCEEEEEECCCCC
T ss_conf 1101376544202110357642--278886158702887179859974067872503523------65304664012345
Q ss_pred CCEEEEEECCCEEEEEECC-CCEEEEEECC-CEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEE-E
Q ss_conf 8999997469889999378-8588985169-73489887348968997358987999987898599984488764114-1
Q T0558 154 GNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ-L 230 (294)
Q Consensus 154 G~~i~~g~~d~~i~~~d~~-g~~~~~~~~~-~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~-~ 230 (294)
+.++++++.|+.|++||.. ++.+.++..+ ..+..+.+ +++.+++++.|+.+++||.+++............... .
T Consensus 322 ~~~l~~~s~d~~i~vwd~~~~~~~~~l~~h~~~V~~~~~--~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 399 (464)
T 1nex_B 322 RKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL--SDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTF 399 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEE--CSSEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEE
T ss_pred CCEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEECC--CCCEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEE
T ss_conf 304572179987998525775044898676530675406--899999998999699998999869998158992799998
Q ss_pred CCCCCEE-ECCCCCEEEEECCCC
Q ss_conf 1345348-938998999804677
Q T0558 231 FFVAQLF-PLQNGGLYICNWQGH 252 (294)
Q Consensus 231 ~~~~~~~-~~~~G~i~i~~~~~~ 252 (294)
.....+. ...||.+.+|+..+.
T Consensus 400 ~~~~~~l~sgsd~~i~vwd~~tg 422 (464)
T 1nex_B 400 YVSDNILVSGSENQFNIYNLRSG 422 (464)
T ss_dssp EECSSEEEEEETTEEEEEETTTC
T ss_pred CCCCCEEEEECCCEEEEEECCCC
T ss_conf 69998999980998999999999
No 59
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, beta propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.72 E-value=6.3e-14 Score=117.07 Aligned_cols=199 Identities=10% Similarity=-0.022 Sum_probs=87.0
Q ss_pred CCCCCCEEEEECCCCEEEEEECCC------CEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEE
Q ss_conf 478885899974798699998878------829999944998731164790798399841--882899752677036772
Q T0558 19 GSSPQHLLVGGSGWNKIAIINKDT------KEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIA 90 (294)
Q Consensus 19 ~s~~~~~l~~gs~~~~i~~~d~~t------g~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~ 90 (294)
.++.+..+++|+.++.+.+|+... .+..... ..+...+..++++|++..++.. +..+++|+..........
T Consensus 114 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (354)
T 2pbi_B 114 YAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSV-AMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF 192 (354)
T ss_dssp ECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEE-EECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEEEEECCCCCCCCCCCEECCCCCCCEEEEE-ECCCCCEEEEEECCCCCEEEEEEECCEEEEECCCCCEECCEE
T ss_conf 9789998999745534531100000025655035787-156785688897589983888740230575023331000000
Q ss_pred C--CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEE
Q ss_conf 3--77763148787378758999705897999985689588999706776776674008999699899999746988999
Q T0558 91 A--PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 168 (294)
Q Consensus 91 ~--~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~ 168 (294)
. ............+....++.+..|..+.+|+..+++....+. .+...++++.++|++++|++++.|+.+++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~d~~i~i 266 (354)
T 2pbi_B 193 HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE------THESDVNSVRYYPSGDAFASGSDDATCRL 266 (354)
T ss_dssp ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEE------CCCCCEEEEEECCCCCEEEEEECCCEEEE
T ss_conf 366420244222110147620002687437999889995305860------57884678998899999999968985998
Q ss_pred EECCC-CEEEEEE---CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCC
Q ss_conf 93788-5889851---69734898873489689973589879999878985999844887
Q T0558 169 IAPNG-QLLNSVK---LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAND 224 (294)
Q Consensus 169 ~d~~g-~~~~~~~---~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~ 224 (294)
|+... +.+.... ....+.++.++++++++++++.++.|++||..+++.+..+.+|.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~H~ 326 (354)
T 2pbi_B 267 YDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE 326 (354)
T ss_dssp EETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS
T ss_pred EECCCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCC
T ss_conf 622788621000001236860599988999999999798989999999995989982899
No 60
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.72 E-value=7.6e-15 Score=123.78 Aligned_cols=234 Identities=9% Similarity=0.018 Sum_probs=156.8
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCC----EEEEEEECCCCCCCCEEEEEC-CCCEEEEE--CCEEEEEECCCCCEE--
Q ss_conf 014788858999747986999988788----299999449987311647907-98399841--882899752677036--
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTK----EIVWEYPLEKGWECNSVAATK-AGEILFSY--SKGAKMITRDGRELW-- 87 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg----~~~w~~~~~~~~~~~~~~~~p-dG~~l~s~--~~~v~~~~~~~~~~~-- 87 (294)
.+.|+++++|++|+.|++|++||..++ +.+.++. +|...+.+++|+| ++++|+++ |+.+++|+.......
T Consensus 73 l~wS~d~~~la~g~~dg~i~lwd~~~~~~~~~~~~~~~-~H~~~V~~l~f~p~~~~~l~sgs~Dg~i~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 73 LDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS 151 (416)
T ss_dssp EEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEEC-CCCCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 99979999999996989599998988988622679976-87898899999668996999995899789984046653332
Q ss_pred -------EEECCCCCCEEEEEECCCCC-EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCE-EE
Q ss_conf -------77237776314878737875-8999705897999985689588999706776776674008999699899-99
Q T0558 88 -------NIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY-LV 158 (294)
Q Consensus 88 -------~~~~~~~~~v~~~~~~~dg~-~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~-i~ 158 (294)
.....+...+..++++++.. ++++++.++.+.+|+...++....+........+...+..+.++|++.. ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred CCCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCEEE
T ss_conf 22453120561578985899986999909999718862688876889600355432102466543204752267640234
Q ss_pred EE---ECCCEEEEEECCC-C-EEEEE--ECCCEEEEEEEEC-CCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEE
Q ss_conf 97---4698899993788-5-88985--1697348988734-89689973589879999878985999844887641141
Q T0558 159 PL---FATSEVREIAPNG-Q-LLNSV--KLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQL 230 (294)
Q Consensus 159 ~g---~~d~~i~~~d~~g-~-~~~~~--~~~~~~~~~~~~~-~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 230 (294)
+. ..|+.|++|+... + .+..+ .+...+.++.+++ +++++++++.|+.+++||..+++.+.++.++......+
T Consensus 232 ~~~~~~~d~~i~~~d~~~~~~~~~~~~~~H~~~v~~l~~~~~~~~~l~s~~~Dg~i~iwd~~~~~~l~~l~~h~~~V~~v 311 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKT 311 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCE
T ss_pred EEEEECCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCEEEE
T ss_conf 43100235760687437897304775057757467999759998379998489989999999990999991899989999
Q ss_pred CCCCC---EEE--CCCCCEEEEECCC
Q ss_conf 13453---489--3899899980467
Q T0558 231 FFVAQ---LFP--LQNGGLYICNWQG 251 (294)
Q Consensus 231 ~~~~~---~~~--~~~G~i~i~~~~~ 251 (294)
.+.+. +.. ..||.+.+|+...
T Consensus 312 ~~sp~~~~llas~s~Dg~i~iw~l~~ 337 (416)
T 2pm9_A 312 KFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp EECTTCTTEEEECCSSSEEEEEESCC
T ss_pred EECCCCCEEEEEEECCCEEEEEECCC
T ss_conf 99799992999994899499996899
No 61
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomics consortium, SGC, apoptosis, polymorphism, transcription; 1.95A {Homo sapiens}
Probab=99.72 E-value=6.6e-14 Score=116.96 Aligned_cols=232 Identities=10% Similarity=0.007 Sum_probs=157.6
Q ss_pred CCCCCC-CEEEEEC---CCCEEEEEECCCCEEEEEEECCCCCCCCEEEEE---CCCCEEEEE--CCEEEEEECCCC-CEE
Q ss_conf 147888-5899974---798699998878829999944998731164790---798399841--882899752677-036
Q T0558 18 QGSSPQ-HLLVGGS---GWNKIAIINKDTKEIVWEYPLEKGWECNSVAAT---KAGEILFSY--SKGAKMITRDGR-ELW 87 (294)
Q Consensus 18 ~~s~~~-~~l~~gs---~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~---pdG~~l~s~--~~~v~~~~~~~~-~~~ 87 (294)
+.++.. ++++.|+ +++.|++||.+++++......++...+.++.|. |++++|+++ |+.+++||.... ...
T Consensus 25 ~w~p~~~~~v~~G~~~~~~g~i~iw~~~~~~~~~~~~~~~~~~v~~~~f~~~~~~~~~l~tg~~d~~i~iwd~~~~~~~~ 104 (357)
T 3i2n_A 25 KWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV 104 (357)
T ss_dssp EECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCS
T ss_pred EECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEE
T ss_conf 99279995999986468998999999779949999955899986999960579999999999388959999899995788
Q ss_pred EEECCCCCCEEEE------EECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEE----EECCCCCEE
Q ss_conf 7723777631487------873787589997058979999856895889997067767766740089----996998999
Q T0558 88 NIAAPAGCEMQTA------RILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQI----NKNKKGNYL 157 (294)
Q Consensus 88 ~~~~~~~~~v~~~------~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~----~~s~dG~~i 157 (294)
....+|...+..+ +++|++++|++++.|+.+.+|+.++++.......... ..+.....++ .++++++++
T Consensus 105 ~~~~~H~~~v~~i~~~~~~~~~~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l 183 (357)
T 3i2n_A 105 YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ-GENKRDCWTVAFGNAYNQEERVV 183 (357)
T ss_dssp EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT-TSCCCCEEEEEEECCCC-CCCEE
T ss_pred EEEECCCCCEEEEEECCCEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEECCC-CCCCCCEEEEEEEEEECCCCCEE
T ss_conf 98707788538664013134999999999997788848977336884012210114-63123056787860188999899
Q ss_pred EEEECCCEEEEEECCC-CEEEEEECCCEEEEEEEE---CCCCEEEECCCCCEEEEEECCCCE-----EEEEECCCCCCCE
Q ss_conf 9974698899993788-588985169734898873---489689973589879999878985-----9998448876411
Q T0558 158 VPLFATSEVREIAPNG-QLLNSVKLSGTPFSSAFL---DNGDCLVACGDAHCFVQLNLESNR-----IVRRVNANDIEGV 228 (294)
Q Consensus 158 ~~g~~d~~i~~~d~~g-~~~~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~i~~~d~~~g~-----~~~~~~~~~~~~~ 228 (294)
++++.|+.|++||.++ ...+.......+.++.+. ++++.+++++.++.+.+||.++.. ......++.....
T Consensus 184 ~~g~~dg~i~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~h~~~i~ 263 (357)
T 3i2n_A 184 CAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVW 263 (357)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEE
T ss_pred EEECCCCEEEEEECCCCCCEEEEECCCCEEEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCCEE
T ss_conf 99758981999989999510554114846899986135544420100569979999876787675510023024568788
Q ss_pred EECCCCC---E--EECCCCCEEEEECC
Q ss_conf 4113453---4--89389989998046
Q T0558 229 QLFFVAQ---L--FPLQNGGLYICNWQ 250 (294)
Q Consensus 229 ~~~~~~~---~--~~~~~G~i~i~~~~ 250 (294)
.+.+.+. + ....||.+.+|+..
T Consensus 264 ~~~~~p~~~~~l~t~~~dg~v~~w~~~ 290 (357)
T 3i2n_A 264 QVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred EEEECCCCCEEEEEECCCCEEEEEECC
T ss_conf 999979998099998499959999788
No 62
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic protein, structural genomics, structural genomics consortiu; 1.70A {Homo sapiens}
Probab=99.72 E-value=2e-13 Score=113.42 Aligned_cols=203 Identities=12% Similarity=0.082 Sum_probs=130.3
Q ss_pred CCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEE---EECCCCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 8829999944998731164790798399841--8828997526770367---7237776314878737875899970589
Q T0558 42 TKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWN---IAAPAGCEMQTARILPDGNALVAWCGHP 116 (294)
Q Consensus 42 tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~---~~~~~~~~v~~~~~~~dg~~l~~~s~~~ 116 (294)
+-.++.+++......+.+++|+|||++|+++ |+.+++|+...+.... ...+|...+.+++|+|+++++++++.+.
T Consensus 4 ~l~l~~~~~~H~~~~V~~lafspdg~~lasg~~Dg~I~iWd~~~~~~~~~~~~~~gH~~~V~~l~~s~~~~~l~s~~~d~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCC
T ss_conf 00021778688999699999969999999990899399997789967888886268789888999989999788621662
Q ss_pred CEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEE----EECCCEEEEEEEE
Q ss_conf 79999856895889997067767766740089996998999997469889999378-858898----5169734898873
Q T0558 117 STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNS----VKLSGTPFSSAFL 191 (294)
Q Consensus 117 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~----~~~~~~~~~~~~~ 191 (294)
.+.+|+............ ..+......+.++++++.+++++.|+.|++||.. +..... ......+..+...
T Consensus 84 ~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 159 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTL----EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp CEEEEEECCC-EEEEEEE----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEE----CCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCEEEEEEC
T ss_conf 079986214662577885----1665506787607986536887189849999754353310000005778863688878
Q ss_pred CCCCEEEECCCCCEEEEEECCCCEE--EEEECCCCCCCEEECCCCC--EE--ECCCCCEEEEE
Q ss_conf 4896899735898799998789859--9984488764114113453--48--93899899980
Q T0558 192 DNGDCLVACGDAHCFVQLNLESNRI--VRRVNANDIEGVQLFFVAQ--LF--PLQNGGLYICN 248 (294)
Q Consensus 192 ~~g~~~v~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~--~~--~~~~G~i~i~~ 248 (294)
+++..+++++.++.+.+++.+.++. +..+.++......+.+.+. .. ...||.+.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~i~iw~ 222 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEE
T ss_conf 999889996135303788725998389899768878688999979999999992898489984
No 63
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A
Probab=99.71 E-value=3.2e-14 Score=119.24 Aligned_cols=243 Identities=12% Similarity=0.030 Sum_probs=161.7
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECC--CCEEEEEEECCCCCCCCEEEEE--CCCCEEEEE--CCEEEEEECCCCCE--E
Q ss_conf 00147888589997479869999887--8829999944998731164790--798399841--88289975267703--6
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKD--TKEIVWEYPLEKGWECNSVAAT--KAGEILFSY--SKGAKMITRDGREL--W 87 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~--tg~~~w~~~~~~~~~~~~~~~~--pdG~~l~s~--~~~v~~~~~~~~~~--~ 87 (294)
.++.++.+++|++||.|++|++||.+ +++.+.++. +|...+.++++. +++.+|+++ |+.+++|+...... .
T Consensus 14 ~i~f~~~G~~lat~s~D~~i~iWd~~~~~~~~~~~l~-~h~~~V~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 92 (297)
T 2pm7_B 14 DAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI 92 (297)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCCEEEEEEE-CCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEE
T ss_conf 9999899999999917992999974499851889992-889998899996089998999993689828966405861012
Q ss_pred EEECCCCCCEEEEEECC--CCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE-------------CC
Q ss_conf 77237776314878737--8758999705897999985689588999706776776674008999-------------69
Q T0558 88 NIAAPAGCEMQTARILP--DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINK-------------NK 152 (294)
Q Consensus 88 ~~~~~~~~~v~~~~~~~--dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-------------s~ 152 (294)
.....+...+..+.++| ++.++++++.++.+.+|+.............. ....+.++.+ .+
T Consensus 93 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~ 168 (297)
T 2pm7_B 93 AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA----HAIGVNSASWAPATIEEDGEHNGTK 168 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC----CSSCEEEEEECCCC-----------
T ss_pred EEEECCCCEEEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCC----CCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 575043450664445411333315887068884047504451000001134----4566505786566434432212345
Q ss_pred CCCEEEEEECCCEEEEEECC-CCE----EEEEE-CCCEEEEEEEECC---CCEEEECCCCCEEEEEECCCC--EEEEEEC
Q ss_conf 98999997469889999378-858----89851-6973489887348---968997358987999987898--5999844
Q T0558 153 KGNYLVPLFATSEVREIAPN-GQL----LNSVK-LSGTPFSSAFLDN---GDCLVACGDAHCFVQLNLESN--RIVRRVN 221 (294)
Q Consensus 153 dG~~i~~g~~d~~i~~~d~~-g~~----~~~~~-~~~~~~~~~~~~~---g~~~v~~~~~~~i~~~d~~~g--~~~~~~~ 221 (294)
++.++++++.|+.+++|+.. ... ..... +...+.++.++|+ +.++++++.|+.+++|+.... .......
T Consensus 169 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~ 248 (297)
T 2pm7_B 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLL 248 (297)
T ss_dssp -CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEES
T ss_pred CCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEEE
T ss_conf 66489999379947887517885201121243145676404998998655633131349998999956588882679986
Q ss_pred CCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCE-EEEEECCCCEEE
Q ss_conf 8876411411345348938998999804677143024777569999089989-999835885378
Q T0558 222 ANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKV-VWQLNDKVKFGM 285 (294)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~-vW~~~~~~~~~~ 285 (294)
.... ....+..+.+.++|++++. -..||.+ +|+.....+...
T Consensus 249 ~~~~---~~~~v~~~~~s~dg~~l~t-------------------~~~Dg~i~vW~~~~~g~~~~ 291 (297)
T 2pm7_B 249 KEEK---FPDVLWRASWSLSGNVLAL-------------------SGGDNKVTLWKENLEGKWEP 291 (297)
T ss_dssp SSSC---CSSCEEEEEECSSSCCEEE-------------------EETTSCEEEEEECTTSCEEE
T ss_pred ECCC---CCCCEEEEEECCCCCEEEE-------------------EECCCEEEEEECCCCCCEEE
T ss_conf 0489---8888899999799999999-------------------97899799997279999886
No 64
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.70 E-value=4.9e-14 Score=117.89 Aligned_cols=224 Identities=9% Similarity=-0.025 Sum_probs=147.2
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEEC-CCCCCCCEEEEECC--CCEEEEE--CCEEEEEECCCCCE--EE
Q ss_conf 001478885899974798699998878829999944-99873116479079--8399841--88289975267703--67
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPL-EKGWECNSVAATKA--GEILFSY--SKGAKMITRDGREL--WN 88 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~-~~~~~~~~~~~~pd--G~~l~s~--~~~v~~~~~~~~~~--~~ 88 (294)
-+++++++++|++|+.|++|++||..+++......+ +|...+.+++|.|+ +++|+++ |+.+++|+...... ..
T Consensus 18 ~v~fs~~G~~las~s~Dg~i~iwd~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~ 97 (316)
T 3bg1_A 18 DAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSH 97 (316)
T ss_dssp EEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEE
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCEEEE
T ss_conf 99997999999999189939999898997688999647789988999823789999999837888222011457410234
Q ss_pred EECCCCCCEEEEEECCC--CCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECC--------------
Q ss_conf 72377763148787378--75899970589799998568958899970677677667400899969--------------
Q T0558 89 IAAPAGCEMQTARILPD--GNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-------------- 152 (294)
Q Consensus 89 ~~~~~~~~v~~~~~~~d--g~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~-------------- 152 (294)
...++...+.++.+.|+ +.++++++.|+.+.+|.............. ......+..+.+++
T Consensus 98 ~~~~~~~~v~~v~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (316)
T 3bg1_A 98 EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKIN---NAHTIGCNAVSWAPAVVPGSLIDHPSGQ 174 (316)
T ss_dssp EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBT---TSSSSCBCCCEECCCCCC------CCSC
T ss_pred EEECCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEEC---CCCCCCCEEECCCCCCCCCCEEECCCCC
T ss_conf 4201257425788578877758999715885389861688730101100---1123321000026654566201123655
Q ss_pred ---CCCEEEEEECCCEEEEEECCCC--EEE--EE-ECCCEEEEEEEECC----CCEEEECCCCCEEEEEECCCCEEE---
Q ss_conf ---9899999746988999937885--889--85-16973489887348----968997358987999987898599---
Q T0558 153 ---KGNYLVPLFATSEVREIAPNGQ--LLN--SV-KLSGTPFSSAFLDN----GDCLVACGDAHCFVQLNLESNRIV--- 217 (294)
Q Consensus 153 ---dG~~i~~g~~d~~i~~~d~~g~--~~~--~~-~~~~~~~~~~~~~~----g~~~v~~~~~~~i~~~d~~~g~~~--- 217 (294)
....+++++.|+.+++|+.... ... .. .+...+.++.++|+ +.++++++.++.+.+|+..+++..
T Consensus 175 ~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~Dg~i~iw~~~~~~~~~~~ 254 (316)
T 3bg1_A 175 KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS 254 (316)
T ss_dssp CCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB
T ss_pred CCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEE
T ss_conf 56654079996058859998731575203422215754148689987874557605763258977999979999754055
Q ss_pred -EEECCCCCCCEEECCCCCEEECCCCCEEEEE
Q ss_conf -9844887641141134534893899899980
Q T0558 218 -RRVNANDIEGVQLFFVAQLFPLQNGGLYICN 248 (294)
Q Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~ 248 (294)
.....+. ..+..+.+.++|++++..
T Consensus 255 ~~~~~~h~------~~V~~v~~s~dg~~l~s~ 280 (316)
T 3bg1_A 255 PKLLHKFN------DVVWHVSWSITANILAVS 280 (316)
T ss_dssp CCEEEECS------SCEEEEEECTTTCCEEEE
T ss_pred EEEECCCC------CCEEEEEECCCCCEEEEE
T ss_conf 47706789------988999997998999999
No 65
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.69 E-value=5.8e-14 Score=117.33 Aligned_cols=166 Identities=8% Similarity=-0.051 Sum_probs=124.0
Q ss_pred CCCCEEEEECCCCEEE-EE--CCEEEEEECCCCCE--E--EEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC
Q ss_conf 7311647907983998-41--88289975267703--6--7723777631487873787589997058979999856895
Q T0558 55 WECNSVAATKAGEILF-SY--SKGAKMITRDGREL--W--NIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGE 127 (294)
Q Consensus 55 ~~~~~~~~~pdG~~l~-s~--~~~v~~~~~~~~~~--~--~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~ 127 (294)
..+.+++|+|||+.++ ++ |+.+++|+.+.... . .....+...+.+++|+|||+++++++.++.+.+|+..+++
T Consensus 103 ~~i~~l~fs~d~~~l~a~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d~~~~~~~~~~~~ 182 (450)
T 2vdu_B 103 SYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp CCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCC
T ss_conf 87789999699995999967999599996578984178865025778872799964885158986599964799725663
Q ss_pred EEEEEECCCCCCCCCCCCCEEEECCCCC---EEEEEECCCEEEEEECC-CCEEEEE--ECCCEEEEEEEECCCCEEEECC
Q ss_conf 8899970677677667400899969989---99997469889999378-8588985--1697348988734896899735
Q T0558 128 VLSKTEFETGIERPHAQFRQINKNKKGN---YLVPLFATSEVREIAPN-GQLLNSV--KLSGTPFSSAFLDNGDCLVACG 201 (294)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~s~dG~---~i~~g~~d~~i~~~d~~-g~~~~~~--~~~~~~~~~~~~~~g~~~v~~~ 201 (294)
..... .....+|...+++++++|||. ++++++.|++|++|+.. +..+... .+...+..+.+++++ ++++++
T Consensus 183 ~~~~~--~~~~~gh~~~v~~v~~s~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~h~~~V~~l~~s~d~-~liS~s 259 (450)
T 2vdu_B 183 EEKFT--QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDY-LLLSAG 259 (450)
T ss_dssp CSSCC--CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTT-EEEEEE
T ss_pred CCEEE--CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCEECCCCCCCCCCEEEEEECCCC-EEEEEC
T ss_conf 31055--223567668368999823778640899927999899998885741033238987878999977997-899954
Q ss_pred CCCEEEEEECCCCEEEEEECCC
Q ss_conf 8987999987898599984488
Q T0558 202 DAHCFVQLNLESNRIVRRVNAN 223 (294)
Q Consensus 202 ~~~~i~~~d~~~g~~~~~~~~~ 223 (294)
.|+.+++||..+|+++.++..+
T Consensus 260 ~D~~i~~W~~~~g~~~~~~~~~ 281 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp SSSEEEEEETTTCCEEEEEECH
T ss_pred CCCCEEEEECCCCCEEEEEECC
T ss_conf 9860999999999799999478
No 66
>3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.69 E-value=8.9e-13 Score=108.68 Aligned_cols=191 Identities=12% Similarity=0.055 Sum_probs=134.8
Q ss_pred CCCCCEEEEECCCCEEEEEECCCCEEEEEEE-CCCCCCCCEEEEEC--CCCEEEEE--CCEEEEEECCCC--CEEEEECC
Q ss_conf 7888589997479869999887882999994-49987311647907--98399841--882899752677--03677237
Q T0558 20 SSPQHLLVGGSGWNKIAIINKDTKEIVWEYP-LEKGWECNSVAATK--AGEILFSY--SKGAKMITRDGR--ELWNIAAP 92 (294)
Q Consensus 20 s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~-~~~~~~~~~~~~~p--dG~~l~s~--~~~v~~~~~~~~--~~~~~~~~ 92 (294)
+++.++|++|+.|++|++||..+++...... ..+...+.++.++| ++.+++++ ++.+++|+.... ........
T Consensus 66 ~~~~~~l~s~~~D~~v~vwd~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~~~~~~~dg~i~v~d~~~~~~~~~~~~~~ 145 (379)
T 3jrp_A 66 PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 145 (379)
T ss_dssp GGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 89999999970675664101111111111111111111111111111111111111122322047611120001100111
Q ss_pred CCCCEEEEEECC-------------CCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCC---CCE
Q ss_conf 776314878737-------------8758999705897999985689588999706776776674008999699---899
Q T0558 93 AGCEMQTARILP-------------DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK---GNY 156 (294)
Q Consensus 93 ~~~~v~~~~~~~-------------dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~d---G~~ 156 (294)
....+..+.++| ++..+++++.|+.+.+|....+........ ...+|...+++++|+|+ +++
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~--~l~~h~~~V~~v~~sp~~~~~~~ 223 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES--TLEGHSDWVRDVAWSPTVLLRSY 223 (379)
T ss_dssp CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE--EECCCSSCEEEEEECCCCSSSEE
T ss_pred CCCCCEEEEEECCCCCCCCCEECCCCCCEEEEEECCCCEEEEEECCCCCCCEECC--CCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 2453303431013345431000047898899994799577874123332100022--34676764213223677666136
Q ss_pred EEEEECCCEEEEEECC---CCEEEEE----ECCCEEEEEEEECCCCEEEECCCCCEEEEEECC
Q ss_conf 9997469889999378---8588985----169734898873489689973589879999878
Q T0558 157 LVPLFATSEVREIAPN---GQLLNSV----KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 212 (294)
Q Consensus 157 i~~g~~d~~i~~~d~~---g~~~~~~----~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~ 212 (294)
|++++.|++|++|+.+ +...... .+...+.++.++|+|+++++++.|+.|++|+.+
T Consensus 224 l~sgs~D~~v~iw~~~~~~~~~~~~l~~~~~h~~~V~~v~fspdg~~l~s~s~Dg~I~vW~~~ 286 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred EEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEC
T ss_conf 887638997999957787673105542035667847899998999999999489949999557
No 67
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleoporin complex, nuclear pore complex, macromolecular assembly; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.68 E-value=3.4e-13 Score=111.72 Aligned_cols=199 Identities=9% Similarity=-0.032 Sum_probs=143.7
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEE----EEEEECCCCCCCCEEEEEC--CCCEEEEE--CCEEEEEECCCCC---
Q ss_conf 01478885899974798699998878829----9999449987311647907--98399841--8828997526770---
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEI----VWEYPLEKGWECNSVAATK--AGEILFSY--SKGAKMITRDGRE--- 85 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~----~w~~~~~~~~~~~~~~~~p--dG~~l~s~--~~~v~~~~~~~~~--- 85 (294)
++.++++++|++|+.|++|++||.+++.. +.++. +|...+.+++|.| ++.+|+++ |+.+++|+.+...
T Consensus 17 v~~sp~g~~lat~s~D~~v~iw~~~~~~~~~~~~~~~~-~H~~~V~~v~f~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~ 95 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEEC 95 (351)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTT
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEEEEC-CCCCCEEEEEEECCCCCCEEEEEECCCCCCEECCCCCCCCC
T ss_conf 99969999999992899399997579974328968971-77898889999259999899999258884100100013442
Q ss_pred ------EEEEECCCCCCEEEEEECCC--CCEEEEEECCCCEEEEECCCCCEEEE------EEC-CCCCCCCCCCCCEEEE
Q ss_conf ------36772377763148787378--75899970589799998568958899------970-6776776674008999
Q T0558 86 ------LWNIAAPAGCEMQTARILPD--GNALVAWCGHPSTILEVNMKGEVLSK------TEF-ETGIERPHAQFRQINK 150 (294)
Q Consensus 86 ------~~~~~~~~~~~v~~~~~~~d--g~~l~~~s~~~~~~~~~~~~G~~~~~------~~~-~~~~~~~~~~~~~~~~ 150 (294)
......++...+..+.|+|+ +.++++++.|+.+.+|+..+++.+.. ... ......+.....++.+
T Consensus 96 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 96 SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred CCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEE
T ss_conf 22232257896588886287773256788889999357884010345342110012332100000023566776237885
Q ss_pred CCC---CCEEEEEECCCEEEEEECC-CCEE--EEEE-CCCEEEEEEEECC----CCEEEECCCCCEEEEEECCCCEE
Q ss_conf 699---8999997469889999378-8588--9851-6973489887348----96899735898799998789859
Q T0558 151 NKK---GNYLVPLFATSEVREIAPN-GQLL--NSVK-LSGTPFSSAFLDN----GDCLVACGDAHCFVQLNLESNRI 216 (294)
Q Consensus 151 s~d---G~~i~~g~~d~~i~~~d~~-g~~~--~~~~-~~~~~~~~~~~~~----g~~~v~~~~~~~i~~~d~~~g~~ 216 (294)
.++ +..+++++.++.+..|+.. ++.. .... +...+.++.+.++ +.++++++.++.+++||..+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~~~las~s~Dg~v~iwd~~~~~~ 252 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLS 252 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-
T ss_pred ECCCCCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCE
T ss_conf 20223686202330455414776127860130102576643778997788775511133004676189998999831
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoplasm, cytoskeleton, nucleotide-binding; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.68 E-value=5e-15 Score=125.11 Aligned_cols=197 Identities=14% Similarity=0.041 Sum_probs=137.6
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCE---EEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCC----EE
Q ss_conf 0147888589997479869999887882---9999944998731164790798399841--8828997526770----36
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKE---IVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRE----LW 87 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~---~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~----~~ 87 (294)
.+.+++.++|++||.|++|++||...+. ..... .++...+.+++|+|||..|+++ |+.+++|+...+. ..
T Consensus 61 i~~sp~~~~l~s~s~D~~v~iW~~~~~~~~~~~~~~-~~~~~~v~~v~~sp~g~~la~~s~d~~v~iw~~~~~~~~~~~~ 139 (377)
T 3dwl_C 61 VDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp EEECTTTCCEEEEETTSSEEEC------CCCCEEEC-CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCE
T ss_pred EEECCCCCEEEEEECCCCEEEEEECCCCCCEEEEEE-CCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCEEEE
T ss_conf 999799899999989994999861255661410595-5889988999977743312577289459998645556520247
Q ss_pred EEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEE-----------EEECCCCCCCCCCCCCEEEECCCCCE
Q ss_conf 7723777631487873787589997058979999856895889-----------99706776776674008999699899
Q T0558 88 NIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLS-----------KTEFETGIERPHAQFRQINKNKKGNY 156 (294)
Q Consensus 88 ~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~-----------~~~~~~~~~~~~~~~~~~~~s~dG~~ 156 (294)
....++...+.+++|+|+++++++++.|+.+.+|......... .+...-....+...+.++.|+|||++
T Consensus 140 ~~~~~~~~~v~~l~~~p~~~~l~~~s~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 219 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSC
T ss_pred EEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCE
T ss_conf 88511255499988889999999994899499976412454567663211232786317870587650789999999999
Q ss_pred EEEEECCCEEEEEECCC-CE----EEEEECC-CEEEEEEEECCCCEEEECCCCCEEEEEECCCCE
Q ss_conf 99974698899993788-58----8985169-734898873489689973589879999878985
Q T0558 157 LVPLFATSEVREIAPNG-QL----LNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 215 (294)
Q Consensus 157 i~~g~~d~~i~~~d~~g-~~----~~~~~~~-~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~ 215 (294)
+++++.|+.|++|+... .. ....... .+...+.+.+++. +++++.+..++++....+.
T Consensus 220 l~s~~~D~~i~i~d~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~-~v~~g~D~~~~l~~~~~~~ 283 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPILLQGNESG 283 (377)
T ss_dssp EEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEEEECCCC--
T ss_pred EEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCE-EEEEECCCCEEEEEECCCC
T ss_conf 999978994999989998767168888506999788999969998-9999869928999978996
No 69
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.68 E-value=1.7e-13 Score=113.85 Aligned_cols=236 Identities=11% Similarity=-0.013 Sum_probs=141.9
Q ss_pred CCEEEEECCCCEEEEEECCCCEEE------EEEECCCCCCCCEEEEE------C-CCCEEEEE--CCEEEEEECCCCC--
Q ss_conf 858999747986999988788299------99944998731164790------7-98399841--8828997526770--
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIV------WEYPLEKGWECNSVAAT------K-AGEILFSY--SKGAKMITRDGRE-- 85 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~------w~~~~~~~~~~~~~~~~------p-dG~~l~s~--~~~v~~~~~~~~~-- 85 (294)
.++++++|.|++|++||..+++.. .... .+...++.+... + ++.++++. |+.+++|+.....
T Consensus 26 ~~~l~T~S~D~tvriWd~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~ias~~~dg~i~~w~~~~~~~~ 104 (397)
T 1sq9_A 26 NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET 104 (397)
T ss_dssp SSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTT
T ss_pred CCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEE-ECCCCCEEEEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCC
T ss_conf 9989999799949997898788776540468641-013771576678754058998529999938993999992489820
Q ss_pred --EEEEE------CCCCCCEEEEEECCCC-----CEEEEEECCCCEEEEECCCC------------CEEEEEECCCCCCC
Q ss_conf --36772------3777631487873787-----58999705897999985689------------58899970677677
Q T0558 86 --LWNIA------APAGCEMQTARILPDG-----NALVAWCGHPSTILEVNMKG------------EVLSKTEFETGIER 140 (294)
Q Consensus 86 --~~~~~------~~~~~~v~~~~~~~dg-----~~l~~~s~~~~~~~~~~~~G------------~~~~~~~~~~~~~~ 140 (294)
..... ..+...++.+.+.+++ .++++++.++.+.+|+.... ..............
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (397)
T 1sq9_A 105 KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT 184 (397)
T ss_dssp CCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS
T ss_pred EEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEECCCC
T ss_conf 56512210576303578866899983478865310799982999199995667776430123310342001440210357
Q ss_pred CCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEE-------CCCEEEEEEEECCCCEEEECCCCC---EEEEE
Q ss_conf 66740089996998999997469889999378-85889851-------697348988734896899735898---79999
Q T0558 141 PHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVK-------LSGTPFSSAFLDNGDCLVACGDAH---CFVQL 209 (294)
Q Consensus 141 ~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~~~-------~~~~~~~~~~~~~g~~~v~~~~~~---~i~~~ 209 (294)
+.....+++++||| +|++|+.|+.|++||.+ ++.+.... +...+.++.++|+|+++++++.|+ .+.+|
T Consensus 185 ~~~~~~~v~~s~dg-~lasgs~Dg~i~vwd~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D~t~~~i~lw 263 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 263 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEECCCC-EEEEEECCCCEEEEEECCCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 88856899977999-89999589859998611332111222100010446648898513677621103467752101330
Q ss_pred ECCCCEEEEEECCCCCC-------CEEECCCCCEEECCCCCEEEEECCCCEEECCCCC
Q ss_conf 87898599984488764-------1141134534893899899980467714302477
Q T0558 210 NLESNRIVRRVNANDIE-------GVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGK 260 (294)
Q Consensus 210 d~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~ 260 (294)
|.++|+.+..+...... ..+...+.++.+.++|++++.......++.|...
T Consensus 264 d~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~~s~dg~~l~S~s~D~~i~vWd~~ 321 (397)
T 1sq9_A 264 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp ETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCCCEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEECCCCEEEEEECC
T ss_conf 1445600110035665643102210235876634788977725887599979999999
No 70
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 1trj_A 3jyv_R*
Probab=99.67 E-value=6.2e-12 Score=102.53 Aligned_cols=235 Identities=13% Similarity=0.090 Sum_probs=173.6
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCC
Q ss_conf 01478885899974798699998878829999944998731164790798399841--8828997526770367723777
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAG 94 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~ 94 (294)
...++++++|++++.|+.+++||....+.+.... .+......+.+.+++..++++ ++.+++|+..++.. .....+.
T Consensus 71 ~~~s~~~~~l~s~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~-~~~~~~~ 148 (319)
T 3frx_A 71 CTLTADGAYALSASWDKTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCL-ATLLGHN 148 (319)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEE-EEECCCS
T ss_pred EEECCCCCEEEEECCCCEEEECCCCCCCEEEEEC-CCCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCEE-EEEECCC
T ss_conf 9995899977740367125631235673013411-4455324443204775034203565526887477625-6662245
Q ss_pred CCEEEEEECCCCC------EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEE
Q ss_conf 6314878737875------8999705897999985689588999706776776674008999699899999746988999
Q T0558 95 CEMQTARILPDGN------ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 168 (294)
Q Consensus 95 ~~v~~~~~~~dg~------~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~ 168 (294)
.....+.+.|+.. .+++++.+..+.+|+..+++++..+. .+...+.++.++|||++|++++.|+.|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~s~~~dg~i~~ 222 (319)
T 3frx_A 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI------GHNSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC------CCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred CEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEC------CCCCCEEEEEECCCCCEEEEECCCCEEEE
T ss_conf 303455523775445664269995489649975068880889975------78997789999899999999928996998
Q ss_pred EECC-CCEEEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCC--CEEECCCCCEEECCCCCEE
Q ss_conf 9378-858898516973489887348968997358987999987898599984488764--1141134534893899899
Q T0558 169 IAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE--GVQLFFVAQLFPLQNGGLY 245 (294)
Q Consensus 169 ~d~~-g~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~G~i~ 245 (294)
|+.. ...............+.++|++.++++++ ++.+.+|+.+++............ ......+..+.+.++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 301 (319)
T 3frx_A 223 WNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTL 301 (319)
T ss_dssp EETTTTEEEEEEECCSCEEEEEECSSSSEEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEE
T ss_pred ECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC-CCEEEEEECCCCCEEEEEECEEEEECCCCCCCEEEEEECCCCCEE
T ss_conf 5057733557873687431000122002577736-995999988898387872010210304788998999998998999
Q ss_pred EEECCCCEEECCCCCCCEEEEECCCCCE-EEEEEC
Q ss_conf 9804677143024777569999089989-999835
Q T0558 246 ICNWQGHDREAGKGKHPQLVEIDSEGKV-VWQLND 279 (294)
Q Consensus 246 i~~~~~~~~~~~~~~~~~~~~i~~~G~~-vW~~~~ 279 (294)
+. -..||.+ ||++..
T Consensus 302 ~s-------------------g~~Dg~v~vWdl~T 317 (319)
T 3frx_A 302 FA-------------------GYTDNVIRVWQVMT 317 (319)
T ss_dssp EE-------------------EETTSCEEEEEEEE
T ss_pred EE-------------------EECCCEEEEEECCC
T ss_conf 99-------------------96899899997866
No 71
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.67 E-value=6.6e-14 Score=116.94 Aligned_cols=192 Identities=8% Similarity=-0.035 Sum_probs=139.0
Q ss_pred CCCCCCCCEE-EEECCCCEEEEEECCCCEE--EEEEE-CCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCC----CE
Q ss_conf 0147888589-9974798699998878829--99994-4998731164790798399841--882899752677----03
Q T0558 17 AQGSSPQHLL-VGGSGWNKIAIINKDTKEI--VWEYP-LEKGWECNSVAATKAGEILFSY--SKGAKMITRDGR----EL 86 (294)
Q Consensus 17 ~~~s~~~~~l-~~gs~~~~i~~~d~~tg~~--~w~~~-~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~----~~ 86 (294)
++++++++.| ++|+.|+.|++||.++++. +.... ..+...+.+++|+|||++++++ ++.+++|+.... ..
T Consensus 108 l~fs~d~~~l~a~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d~~~~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCEEE
T ss_conf 99969999599996799959999657898417886502577887279996488515898659996479972566331055
Q ss_pred EEEECCCCCCEEEEEECCCC---CEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECC
Q ss_conf 67723777631487873787---589997058979999856895889997067767766740089996998999997469
Q T0558 87 WNIAAPAGCEMQTARILPDG---NALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT 163 (294)
Q Consensus 87 ~~~~~~~~~~v~~~~~~~dg---~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d 163 (294)
.....+|...+.+++|+|++ .++++++.|+.+.+|+..++..+..+. .+|...++++.++||+ +|++++.|
T Consensus 188 ~~~~~gh~~~v~~v~~s~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~-----~~h~~~V~~l~~s~d~-~liS~s~D 261 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL-----FGHKHFVSSICCGKDY-LLLSAGGD 261 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC-----CCCSSCEEEEEECSTT-EEEEEESS
T ss_pred CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCEECCCC-----CCCCCCEEEEEECCCC-EEEEECCC
T ss_conf 22356766836899982377864089992799989999888574103323-----8987878999977997-89995498
Q ss_pred CEEEEEECC-CCEEEEEECC--------------------------CEEEEEEEECCCCEEEEC-CCCCEEEEEECCCC
Q ss_conf 889999378-8588985169--------------------------734898873489689973-58987999987898
Q T0558 164 SEVREIAPN-GQLLNSVKLS--------------------------GTPFSSAFLDNGDCLVAC-GDAHCFVQLNLESN 214 (294)
Q Consensus 164 ~~i~~~d~~-g~~~~~~~~~--------------------------~~~~~~~~~~~g~~~v~~-~~~~~i~~~d~~~g 214 (294)
+.|++||.. ++.+.++... ..+..+.+++++..++.. ..++.+++++....
T Consensus 262 ~~i~~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~~~~v~~~~~~~~ 340 (450)
T 2vdu_B 262 DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK 340 (450)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS
T ss_pred CCEEEEECCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 6099999999979999947874203111032364332133467603899689987999879999768993799995377
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.67 E-value=2.2e-13 Score=113.14 Aligned_cols=181 Identities=11% Similarity=0.037 Sum_probs=133.0
Q ss_pred CCCEEEEEEECCCCCCCCEEEEECC-CCEEEEE--CCEEEEEECCCCC---EE--EEECCCCCCEEEEEECCCCCEEEEE
Q ss_conf 7882999994499873116479079-8399841--8828997526770---36--7723777631487873787589997
Q T0558 41 DTKEIVWEYPLEKGWECNSVAATKA-GEILFSY--SKGAKMITRDGRE---LW--NIAAPAGCEMQTARILPDGNALVAW 112 (294)
Q Consensus 41 ~tg~~~w~~~~~~~~~~~~~~~~pd-G~~l~s~--~~~v~~~~~~~~~---~~--~~~~~~~~~v~~~~~~~dg~~l~~~ 112 (294)
-.|+++.++...+...+.+++++|| +.+|+++ |+.+++||....+ .. .....+...+.+++|.|++++++++
T Consensus 50 ~~g~~i~~~~~h~~~~v~~~~~sp~~~~~l~sgs~DgtikvWd~~~~~~~~~~~~~~~~~h~~~V~~l~f~~~~~~l~s~ 129 (437)
T 3gre_A 50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVS 129 (437)
T ss_dssp CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCEECCEEEEECCCCCEEEEEEECCCCEEEEE
T ss_conf 58849999778899858999994899929999618991999989988674530305851489988999993899999999
Q ss_pred ECCCCEEEEECCCCCE-----------EEEEECCCCCCCCCCCCCEEEECCCCC-EEEEEECCCEEEEEEC-CCCEEEEE
Q ss_conf 0589799998568958-----------899970677677667400899969989-9999746988999937-88588985
Q T0558 113 CGHPSTILEVNMKGEV-----------LSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREIAP-NGQLLNSV 179 (294)
Q Consensus 113 s~~~~~~~~~~~~G~~-----------~~~~~~~~~~~~~~~~~~~~~~s~dG~-~i~~g~~d~~i~~~d~-~g~~~~~~ 179 (294)
+.|+.+.+|+...++. +....... ...+...+....+.++++ ++++++.|++|++||. +++.++.+
T Consensus 130 s~Dg~i~~w~i~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~s~d~~i~~wD~~~~~~~~~l 208 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKN-FGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGG-GSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCCEEEEEECCCCCCCCEEEECCCCEEEEEEEEC-CCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCC
T ss_conf 79997999980388875303415752367887405-88987608999982899949999989997899855778611110
Q ss_pred EC---CCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECC
Q ss_conf 16---97348988734896899735898799998789859998448
Q T0558 180 KL---SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA 222 (294)
Q Consensus 180 ~~---~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~ 222 (294)
.. .+.+.++.+.++++++++++.++.+.+||.+.+..+..+..
T Consensus 209 ~~~~~~g~v~s~~~~~~~~~l~sgs~dg~i~lWDlr~~~~~~~~~~ 254 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF 254 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC
T ss_pred CCCCCCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCCEEEEEEC
T ss_conf 0134356156640684104576025788645998888958788886
No 73
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.67 E-value=1.2e-12 Score=107.72 Aligned_cols=163 Identities=14% Similarity=0.119 Sum_probs=114.6
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECC-CCCCCCEEEEECCCCEEE-EE--CCEEEEEECCCCCEEE-EECCC----
Q ss_conf 858999747986999988788299999449-987311647907983998-41--8828997526770367-72377----
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLE-KGWECNSVAATKAGEILF-SY--SKGAKMITRDGRELWN-IAAPA---- 93 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~-~~~~~~~~~~~pdG~~l~-s~--~~~v~~~~~~~~~~~~-~~~~~---- 93 (294)
..+|++++.+++|.+||.+|++++.+++.. ++..+.+++++|||++++ ++ ++.+++||.....+.. .....
T Consensus 1 ~~~lvt~~~~~~v~v~D~~t~~~~~~i~~~~~~~~~~~~~~SpDg~~l~v~~~~~~~v~~~D~~tg~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred CEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 95999967899899999999929999987788998618999799999999979999699999999949999850036677
Q ss_pred CCCEEEEEECCCCCEEEEEEC------------CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE
Q ss_conf 763148787378758999705------------89799998568958899970677677667400899969989999974
Q T0558 94 GCEMQTARILPDGNALVAWCG------------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF 161 (294)
Q Consensus 94 ~~~v~~~~~~~dg~~l~~~s~------------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~ 161 (294)
.....+++++|||+++++++. ...+.+|+..+++.++.+.... .+..+++++||+++++++
T Consensus 81 ~~~~~~~~~spdg~~l~v~~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~~~~ 153 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-------QITMLAWARDGSKLYGLG 153 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-------SCCCEEECTTSSCEEEES
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCCEEEEEECCCCEEEEEECCCC-------CEEEEEECCCCCEEEEEC
T ss_conf 8770448991699989998458764201024676459999898981999974799-------637999988998999972
Q ss_pred CCCEEEEEECC-CCEEEEEECCCEEEEEEEECCC
Q ss_conf 69889999378-8588985169734898873489
Q T0558 162 ATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNG 194 (294)
Q Consensus 162 ~d~~i~~~d~~-g~~~~~~~~~~~~~~~~~~~~g 194 (294)
+.+.+||.. ++.......+..+..+.+.+++
T Consensus 154 --~~~~~~d~~t~~~~~~~~~~~~~~~~~~~~~~ 185 (337)
T 1pby_B 154 --RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDV 185 (337)
T ss_dssp --SSEEEEETTTTEEEEEECSTTTTTTTBCCCBC
T ss_pred --CCCEEEECCCCCEEEEEECCCCCCEEEECCCC
T ss_conf --88639989889499999569986325888887
No 74
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.66 E-value=1.4e-12 Score=107.19 Aligned_cols=213 Identities=10% Similarity=0.013 Sum_probs=136.5
Q ss_pred HCCCCCCCCEE-EEECCCCEEEEEECCCCEEEEEEECCCC----CCCCEEEEECCCCEEEEE--------------CCEE
Q ss_conf 00147888589-9974798699998878829999944998----731164790798399841--------------8828
Q T0558 16 FAQGSSPQHLL-VGGSGWNKIAIINKDTKEIVWEYPLEKG----WECNSVAATKAGEILFSY--------------SKGA 76 (294)
Q Consensus 16 ~~~~s~~~~~l-~~gs~~~~i~~~d~~tg~~~w~~~~~~~----~~~~~~~~~pdG~~l~s~--------------~~~v 76 (294)
-...|++++.+ ++++.+++|.+||.++++++++...... ..+..++++|||+.++.. ...+
T Consensus 38 ~~~~SpDg~~l~v~~~~~~~v~~~D~~tg~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~~~~~~~~~~~~~ 117 (337)
T 1pby_B 38 VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRV 117 (337)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred EEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCCEE
T ss_conf 89997999999999799996999999999499998500366778770448991699989998458764201024676459
Q ss_pred EEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCE
Q ss_conf 99752677036772377763148787378758999705897999985689588999706776776674008999699899
Q T0558 77 KMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY 156 (294)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~ 156 (294)
.+|+............ ...+..+.+++||+++++++ ....+|+..+++..+.+....... .+.+++|+..
T Consensus 118 ~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~--~~~~~~d~~t~~~~~~~~~~~~~~-------~~~~~~~~~~ 187 (337)
T 1pby_B 118 ALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG--RDLHVMDPEAGTLVEDKPIQSWEA-------ETYAQPDVLA 187 (337)
T ss_dssp EEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES--SSEEEEETTTTEEEEEECSTTTTT-------TTBCCCBCCC
T ss_pred EEEECCCCEEEEEECC-CCCEEEEEECCCCCEEEEEC--CCCEEEECCCCCEEEEEECCCCCC-------EEEECCCCCE
T ss_conf 9998989819999747-99637999988998999972--886399898894999995699863-------2588888762
Q ss_pred EEE------------------------EECCCEEEEEECC-CCEEE--EEECCCEEEEEEEECCCCEEEECCCCCEEEEE
Q ss_conf 999------------------------7469889999378-85889--85169734898873489689973589879999
Q T0558 157 LVP------------------------LFATSEVREIAPN-GQLLN--SVKLSGTPFSSAFLDNGDCLVACGDAHCFVQL 209 (294)
Q Consensus 157 i~~------------------------g~~d~~i~~~d~~-g~~~~--~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~ 209 (294)
+.. ......+..++.. +.... .......+....+.+++..++..+ +.+.+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~v~ 265 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAY--NVLESF 265 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEE--SEEEEE
T ss_pred EEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEECC--CEEEEE
T ss_conf 463047786168977763114540455147885089976789588788428897469999717876999757--648999
Q ss_pred ECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEE
Q ss_conf 87898599984488764114113453489389989998
Q T0558 210 NLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYIC 247 (294)
Q Consensus 210 d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~ 247 (294)
|..+++.+.+..... .+.++.+.+||+.+..
T Consensus 266 d~~t~~~~~~~~~~~-------~~~~va~s~Dg~~l~v 296 (337)
T 1pby_B 266 DLEKNASIKRVPLPH-------SYYSVNVSTDGSTVWL 296 (337)
T ss_dssp ETTTTEEEEEEECSS-------CCCEEEECTTSCEEEE
T ss_pred ECCCCCEEEEECCCC-------CEEEEEECCCCCEEEE
T ss_conf 898894999973899-------8889999789999999
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomics consortium, SGC, apoptosis, polymorphism, transcription; 1.95A {Homo sapiens}
Probab=99.65 E-value=5e-13 Score=110.49 Aligned_cols=193 Identities=13% Similarity=0.026 Sum_probs=134.6
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEE-EEEEECCCCCCCCE------EEEECCCCEEEEE--CCEEEEEECCCCCE
Q ss_conf 001478885899974798699998878829-99994499873116------4790798399841--88289975267703
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEI-VWEYPLEKGWECNS------VAATKAGEILFSY--SKGAKMITRDGREL 86 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~-~w~~~~~~~~~~~~------~~~~pdG~~l~s~--~~~v~~~~~~~~~~ 86 (294)
|...++.+++|++|+.|+.|.+||.++++. +... .+|...+.+ ++++||+.+|+++ |+.+++||......
T Consensus 73 f~~~~~~~~~l~tg~~d~~i~iwd~~~~~~~~~~~-~~H~~~v~~i~~~~~~~~~~~~~~l~sgs~Dg~v~iWd~~~~~~ 151 (357)
T 3i2n_A 73 FGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSV-KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD 151 (357)
T ss_dssp CTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEE-CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS
T ss_pred EECCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE-ECCCCCEEEEEECCCEEECCCCCEEEEEECCCCCEEEEECCCCC
T ss_conf 60579999999999388959999899995788987-07788538664013134999999999997788848977336884
Q ss_pred -EEE---EC-CCCCCEEE----EEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECC---CC
Q ss_conf -677---23-77763148----78737875899970589799998568958899970677677667400899969---98
Q T0558 87 -WNI---AA-PAGCEMQT----ARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK---KG 154 (294)
Q Consensus 87 -~~~---~~-~~~~~v~~----~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~---dG 154 (294)
... .. .+...+++ ..+.++++++++++.|+.+.+|+..++.+.++.... ..+..+.+.+ ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-------~~v~~i~~~~~~~~~ 224 (357)
T 3i2n_A 152 PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIK-------NGVCSLEFDRKDISM 224 (357)
T ss_dssp CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECS-------SCEEEEEESCSSSSC
T ss_pred CEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCEEEEECC-------CCEEEEEEEECCCCC
T ss_conf 0122101146312305678786018899989999758981999989999510554114-------846899986135544
Q ss_pred CEEEEEECCCEEEEEECCCC------EEEE-EECCCEEEEEEEECCCC-EEEECCCCCEEEEEECCCCEE
Q ss_conf 99999746988999937885------8898-51697348988734896-899735898799998789859
Q T0558 155 NYLVPLFATSEVREIAPNGQ------LLNS-VKLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRI 216 (294)
Q Consensus 155 ~~i~~g~~d~~i~~~d~~g~------~~~~-~~~~~~~~~~~~~~~g~-~~v~~~~~~~i~~~d~~~g~~ 216 (294)
++|++++.|+.+++||.... .... ..+...+..+.++|.+. ++++++.++.+.+|+......
T Consensus 225 ~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~l~t~~~dg~v~~w~~~~~~~ 294 (357)
T 3i2n_A 225 NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp CEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred CCCEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCE
T ss_conf 4201005699799998767876755100230245687889999799980999984999599997888741
No 76
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-BOX; WD40 domains, double phosphorylation, transcription/cell cycle complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.65 E-value=5.6e-12 Score=102.86 Aligned_cols=212 Identities=13% Similarity=0.043 Sum_probs=134.8
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEC-----------------------------
Q ss_conf 858999747986999988788299999449987311647907983998418-----------------------------
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYS----------------------------- 73 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~----------------------------- 73 (294)
..+|++|+.|++|++||.++++.+.++. ++...+......+........+
T Consensus 169 ~~~l~sgs~Dg~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEE-CCCEEEEECCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCCEECCC
T ss_conf 8999999589939994467883889994-453035400135640355405652277753888433443103453100036
Q ss_pred -----------CEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCC
Q ss_conf -----------828997526770367723777631487873787589997058979999856895889997067767766
Q T0558 74 -----------KGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPH 142 (294)
Q Consensus 74 -----------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 142 (294)
+.+.+++................ ...+.+++..+++++.|+.+.+|+...+........ +.
T Consensus 248 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~s~d~~i~~~d~~~~~~~~~~~~------~~ 319 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR--VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG------HQ 319 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSC--EEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECC------CC
T ss_pred CCCEEEECCCCCEEEEEECCCCCEEEEEECCCCC--CEEEECCCCEEEEECCCCEEEEEECCCCCCCEECCC------CC
T ss_conf 8861320368731786303677168996147776--168704898778763998699974467741000147------77
Q ss_pred CCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEEC----CCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 740089996998999997469889999378-858898516----973489887348968997358987999987898599
Q T0558 143 AQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL----SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV 217 (294)
Q Consensus 143 ~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~~~~----~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~ 217 (294)
..+.+ +.++++++++++.|+.|++||.. +........ ...+..+. .+++++++++.|+.|++||.++|+.+
T Consensus 320 ~~v~~--~~~~~~~l~sg~~dg~i~i~d~~~~~~~~~~~~~~~h~~~V~~~~--~~~~~l~s~s~Dg~I~iWd~~tg~~v 395 (445)
T 2ovr_B 320 SLTSG--MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ--FNKNFVITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp SCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEE--ECSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEE--CCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEE--ECCCEEEEEECCCEEEEEECCCCCEE
T ss_conf 75140--147899999980896799876689947799846788768789999--54999999958997999989999688
Q ss_pred EEECCCCCCCEEECCCCCEEECCCCCEEEEE
Q ss_conf 9844887641141134534893899899980
Q T0558 218 RRVNANDIEGVQLFFVAQLFPLQNGGLYICN 248 (294)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~ 248 (294)
.++......+ +...+..+.+.++|.+++.+
T Consensus 396 ~~l~~~~~~~-~~~~v~~v~~s~~~~~~a~g 425 (445)
T 2ovr_B 396 RNLVTLESGG-SGGVVWRIRASNTKLVCAVG 425 (445)
T ss_dssp EEEEECTTGG-GTCEEEEEEECSSEEEEEEE
T ss_pred EEEECCCCCC-CCCCEEEEEECCCCCEEEEE
T ss_conf 9984234689-98988999985999899999
No 77
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.65 E-value=2e-12 Score=106.15 Aligned_cols=157 Identities=7% Similarity=-0.112 Sum_probs=99.1
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEE--ECCCCCCCCEEEEECCCC-EEEEE--CCEEEEEECCCCCEEEEE
Q ss_conf 0014788858999747986999988788299999--449987311647907983-99841--882899752677036772
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEY--PLEKGWECNSVAATKAGE-ILFSY--SKGAKMITRDGRELWNIA 90 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~--~~~~~~~~~~~~~~pdG~-~l~s~--~~~v~~~~~~~~~~~~~~ 90 (294)
..+.++++++|++||.|++|++||.++++...+. ..+|...+.+++|.|++. +++++ |+.+++|+..........
T Consensus 16 ~l~fsp~~~~Las~s~Dg~v~iWd~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~l~sg~~d~~v~~~~~~~~~~~~~~ 95 (342)
T 1yfq_A 16 DIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQAL 95 (342)
T ss_dssp EEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEEC
T ss_pred EEEEECCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEECC
T ss_conf 89994899999999689929999766998536887865899988999993799978999804783366402564310001
Q ss_pred CCC-CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 377-7631487873787589997058979999856895889997067767766740089996998999997469889999
Q T0558 91 APA-GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 169 (294)
Q Consensus 91 ~~~-~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~ 169 (294)
..+ ..........+....+++++.+..+.+|+..++.......................+.++++.+++++.|+.+++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~s~s~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 175 (342)
T 1yfq_A 96 TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWF 175 (342)
T ss_dssp BSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE
T ss_conf 11111111111111001111235554220013113566540342100132113221001210024654310477327988
Q ss_pred ECC
Q ss_conf 378
Q T0558 170 APN 172 (294)
Q Consensus 170 d~~ 172 (294)
+..
T Consensus 176 ~~~ 178 (342)
T 1yfq_A 176 RLP 178 (342)
T ss_dssp ESS
T ss_pred ECC
T ss_conf 637
No 78
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, cell migration, acetylation, actin-binding, cytoplasm, phosphoprotein; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A*
Probab=99.64 E-value=2.8e-14 Score=119.61 Aligned_cols=197 Identities=11% Similarity=0.050 Sum_probs=135.2
Q ss_pred CCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCC-CEEEEECCCCCC
Q ss_conf 78885899974798699998878829999944998731164790798399841--882899752677-036772377763
Q T0558 20 SSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGR-ELWNIAAPAGCE 96 (294)
Q Consensus 20 s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~-~~~~~~~~~~~~ 96 (294)
|+++++|++++.++.+..++..+++.+++..- +... ....++|++.+++++ |..++.|+..+. +.|... +...
T Consensus 64 S~~GkyLaa~~~g~v~~~~~~~~~~~~f~l~~-~~dg-~w~l~s~~~g~~lsas~d~~~~~~~~~~~~~~~t~~--~~~~ 139 (493)
T 3llp_A 64 SHLGRYLAADKDGNVTCEREVPGPDCRFLIVA-HDDG-RWSLQSEAHRRYFGGTEDRLSCFAQTVSPAEKWSVH--IAMH 139 (493)
T ss_dssp CTTSCEEEECTTSCEEEEESSCCGGGCEEEEE-CTTS-EEEEEETTTCCEEEEEBTEEEEEESSCCGGGCEEEE--ECSC
T ss_pred CCCCCEEEECCCCCEEEECCCCCCCEEEEEEE-CCCC-EEEEEECCCCEEEECCCCCCEEEEECCCHHHHHEEC--CCCC
T ss_conf 98999999769999999420599856899996-7995-499996799979982588735733149842632032--4672
Q ss_pred EEEEEECCCCCEEEEEECCCCEEEEECCC---CC-EEEEEECCCC-----------------------------CCCCCC
Q ss_conf 14878737875899970589799998568---95-8899970677-----------------------------677667
Q T0558 97 MQTARILPDGNALVAWCGHPSTILEVNMK---GE-VLSKTEFETG-----------------------------IERPHA 143 (294)
Q Consensus 97 v~~~~~~~dg~~l~~~s~~~~~~~~~~~~---G~-~~~~~~~~~~-----------------------------~~~~~~ 143 (294)
++.+.++||+++++.++.|.+..+|++.+ |+ .+.......+ ...+.
T Consensus 140 ~~~~~~S~d~k~~a~~s~d~~~~lw~~~~~~~g~d~~~~l~f~~g~y~~~t~d~k~l~~~~~l~~~~~~~~~~~l~~~~- 218 (493)
T 3llp_A 140 PQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLAFQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRS- 218 (493)
T ss_dssp CEEEEEETTTTEEEEEEC--CCEEEEEESSCCSGGGCEEEEECSSSEEEECTTSCEECTTSCEESSCCGGGCBEEEEC--
T ss_pred EEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCEECCCCEEEECCCCCCEEEEEECC-
T ss_conf 6999996898769992488851896568845541307999977872778757773076687697625888179999658-
Q ss_pred CCCEEE-ECCCCCEEEEEECCCEEEEEECC--CCEEEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 400899-96998999997469889999378--858898516973489887348968997358987999987898599984
Q T0558 144 QFRQIN-KNKKGNYLVPLFATSEVREIAPN--GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 220 (294)
Q Consensus 144 ~~~~~~-~s~dG~~i~~g~~d~~i~~~d~~--g~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~ 220 (294)
..++ ++|||+||++++.|+++++|+.+ ++..+.......+..+.+++||+++.+.+.+..+..+|..++....++
T Consensus 219 --~~va~~s~~Gk~La~~g~d~tlr~w~~~~~g~~e~f~l~~s~~~~~~~s~ngk~vs~~s~~~v~a~~d~~~~~e~fql 296 (493)
T 3llp_A 219 --GKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQL 296 (493)
T ss_dssp ---CEEEECTTSCBEEEETTTTEEEECC---CCGGGCEEEEECCCEEEEECTTSCEEECC-CCCCEEEESCCSGGGCEEE
T ss_pred --CEEEEECCCCCEEEECCCCCEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEECCCCCEEECCCCCCCEEEEEE
T ss_conf --589989899999973389970784246888740588861589779999679999998658858982036897589999
Q ss_pred CCC
Q ss_conf 488
Q T0558 221 NAN 223 (294)
Q Consensus 221 ~~~ 223 (294)
..+
T Consensus 297 e~~ 299 (493)
T 3llp_A 297 EID 299 (493)
T ss_dssp EEC
T ss_pred EEC
T ss_conf 957
No 79
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.64 E-value=4.7e-13 Score=110.72 Aligned_cols=241 Identities=11% Similarity=0.038 Sum_probs=156.3
Q ss_pred EEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCC--EEEEECCCCCCEEEEEECCC--CCEEEEEECCCCE
Q ss_conf 9999944998731164790798399841--8828997526770--36772377763148787378--7589997058979
Q T0558 45 IVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRE--LWNIAAPAGCEMQTARILPD--GNALVAWCGHPST 118 (294)
Q Consensus 45 ~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~d--g~~l~~~s~~~~~ 118 (294)
++.++..+|...+++++|+|||++|+++ |+.+++|+..... ......+|...+..++|.|+ ++++++++.|+.+
T Consensus 4 ~~~~~~~gH~~~V~~v~fs~~G~~las~s~Dg~i~iwd~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~l~s~~~dg~i 83 (316)
T 3bg1_A 4 VINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp ----------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred EEEECCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCC
T ss_conf 77883354679379999979999999991899399998989976889996477899889998237899999998378882
Q ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCC--CCEEEEEECCCEEEEEECCCCEEEEEEC-----CCEEEEEEEE
Q ss_conf 99985689588999706776776674008999699--8999997469889999378858898516-----9734898873
Q T0558 119 ILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK--GNYLVPLFATSEVREIAPNGQLLNSVKL-----SGTPFSSAFL 191 (294)
Q Consensus 119 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~d--G~~i~~g~~d~~i~~~d~~g~~~~~~~~-----~~~~~~~~~~ 191 (294)
.+|+..+++........ .+...+.++.+.|+ +.++++++.|+.+++|+..+...+.... ......+.+.
T Consensus 84 ~vw~~~~~~~~~~~~~~----~~~~~v~~v~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHA----GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp EEECCSSSCCCEEEEEC----CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEEC
T ss_pred EEECCCCCCCEEEEEEE----CCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEECCC
T ss_conf 22011457410234420----12574257885788777589997158853898616887301011001123321000026
Q ss_pred -----------------CCCCEEEECCCCCEEEEEECCCCE---EEEEECCCCCCCEEECCCCC------EE--ECCCCC
Q ss_conf -----------------489689973589879999878985---99984488764114113453------48--938998
Q T0558 192 -----------------DNGDCLVACGDAHCFVQLNLESNR---IVRRVNANDIEGVQLFFVAQ------LF--PLQNGG 243 (294)
Q Consensus 192 -----------------~~g~~~v~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~~~~~~~------~~--~~~~G~ 243 (294)
.....+++++.++.+.+++..... ......++......+.+.+. .. ...||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~Dg~ 239 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR 239 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE
T ss_pred CCCCCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCE
T ss_conf 65456620112365556654079996058859998731575203422215754148689987874557605763258977
Q ss_pred EEEEECCCCEEE-----CCCCCC-----------C-EEEEECCCCCE-EEEEECCCCEEEEEEE
Q ss_conf 999804677143-----024777-----------5-69999089989-9998358853788862
Q T0558 244 LYICNWQGHDRE-----AGKGKH-----------P-QLVEIDSEGKV-VWQLNDKVKFGMISTI 289 (294)
Q Consensus 244 i~i~~~~~~~~~-----~~~~~~-----------~-~~~~i~~~G~~-vW~~~~~~~~~~i~~~ 289 (294)
+.+|+....... ...++. + .++.-..||.+ +|+...+.....++.+
T Consensus 240 i~iw~~~~~~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s~s~Dg~i~iW~~~~~g~~~~i~~i 303 (316)
T 3bg1_A 240 VFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303 (316)
T ss_dssp EEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEEC
T ss_pred EEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCEEEEEEE
T ss_conf 9999799997540554770678998899999799899999978997999986799998998688
No 80
>3gfc_A Histone-binding protein RBBP4; structural genomics, structural genomics consortium, SGC, acetylation, cell cycle, chromatin regulator; 2.30A {Homo sapiens} PDB: 3c99_A 3c9c_A 3cfs_B 3cfv_B
Probab=99.61 E-value=1.2e-12 Score=107.81 Aligned_cols=184 Identities=9% Similarity=0.000 Sum_probs=91.5
Q ss_pred CEEEEECCCCEEEEEECCCCE----------EEEEEECCCCCCCCEEEEECC-CCEEEEE--CCEEEEEECCCCC----E
Q ss_conf 589997479869999887882----------999994499873116479079-8399841--8828997526770----3
Q T0558 24 HLLVGGSGWNKIAIINKDTKE----------IVWEYPLEKGWECNSVAATKA-GEILFSY--SKGAKMITRDGRE----L 86 (294)
Q Consensus 24 ~~l~~gs~~~~i~~~d~~tg~----------~~w~~~~~~~~~~~~~~~~pd-G~~l~s~--~~~v~~~~~~~~~----~ 86 (294)
.++++++.++.|.+||....+ ...++. +|...+.++.+.|+ +.+|+++ ++.+++|+..... .
T Consensus 138 ~lvat~s~~g~v~i~~~~~~~~~~~~~~~~~~~~~l~-gH~~~v~~l~w~~~~~~~l~sgs~dg~I~lWd~~~~~~~~~~ 216 (425)
T 3gfc_A 138 CIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLR-GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKV 216 (425)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCC----CCCSEEEE-CCSSCCCCEEECSSSTTEEEEECTTSCEEEEEGGGSCTTCCE
T ss_pred EEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEE-CCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCEEE
T ss_conf 7999988998099983788866556555664457983-778988899975799998999968990898520256521011
Q ss_pred ---EEEECCCCCCEEEEEECCCCC-EEEEEECCCCEEEEECCCCCE---EEEEECCCCCCCCCCCCCEEEECCCC-CEEE
Q ss_conf ---677237776314878737875-899970589799998568958---89997067767766740089996998-9999
Q T0558 87 ---WNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMKGEV---LSKTEFETGIERPHAQFRQINKNKKG-NYLV 158 (294)
Q Consensus 87 ---~~~~~~~~~~v~~~~~~~dg~-~l~~~s~~~~~~~~~~~~G~~---~~~~~~~~~~~~~~~~~~~~~~s~dG-~~i~ 158 (294)
.....+|...+..++|+|.+. .+++++.|+.+.+|+.+.+.. ...+ ..+...+..+.+++++ .+++
T Consensus 217 ~~~~~~~~~h~~~V~~v~~~~~~~~l~~s~s~dg~v~~~d~r~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~ 290 (425)
T 3gfc_A 217 VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV------DAHTAEVNCLSFNPYSEFILA 290 (425)
T ss_dssp EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCTTSCSEEE------ECCSSCEEEEEECSSCTTEEE
T ss_pred EEEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCC
T ss_conf 11135762677886128980047985688740111211111111122222111------011122332212121111001
Q ss_pred EEECCCEEEEEECCC-CE-EEEE-ECCCEEEEEEEECCCC-EEEECCCCCEEEEEECCCC
Q ss_conf 974698899993788-58-8985-1697348988734896-8997358987999987898
Q T0558 159 PLFATSEVREIAPNG-QL-LNSV-KLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLESN 214 (294)
Q Consensus 159 ~g~~d~~i~~~d~~g-~~-~~~~-~~~~~~~~~~~~~~g~-~~v~~~~~~~i~~~d~~~g 214 (294)
+|+.|+.|++||... +. .... .+...+.++.++|++. ++++++.|+.+++||....
T Consensus 291 ~gs~dg~i~i~D~~~~~~~~~~~~~~~~~V~~v~~~p~~~~~las~~~Dg~i~iWdl~~~ 350 (425)
T 3gfc_A 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350 (425)
T ss_dssp EEETTSCEEEEETTSTTSCCEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEEGGGC
T ss_pred CCCCCCCEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 343321012111122100001202443210145407865645400068997999989888
No 81
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.60 E-value=2.5e-11 Score=98.08 Aligned_cols=258 Identities=12% Similarity=0.077 Sum_probs=137.7
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCE--EEEEEECCCCC--CCCEEEEECCCCEEEEE---CCEEEEEECCCCCEEEE
Q ss_conf 0147888589997479869999887882--99999449987--31164790798399841---88289975267703677
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKE--IVWEYPLEKGW--ECNSVAATKAGEILFSY---SKGAKMITRDGRELWNI 89 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~--~~w~~~~~~~~--~~~~~~~~pdG~~l~s~---~~~v~~~~~~~~~~~~~ 89 (294)
..+|+++++++++|.|+.|.+||..|++ .+.+.+.+.+. -..+++|+|||++++.+ ++++.+||....++.+.
T Consensus 184 v~fSpDGr~lyv~s~Dg~v~~~Dl~t~~~~~v~~i~~g~~~~~i~~s~~fSpDGk~l~v~n~~~~tv~v~D~~t~~~~~~ 263 (543)
T 1nir_A 184 SRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI 263 (543)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE
T ss_pred EEECCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEE
T ss_conf 99768898799973899589998028984178986068888653302416899988999816899899999999963478
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEEC-CCCE-EEEECCCCCEEEEEECCCCC------CCCCCCCCEEEECCCCCEEEEEE
Q ss_conf 2377763148787378758999705-8979-99985689588999706776------77667400899969989999974
Q T0558 90 AAPAGCEMQTARILPDGNALVAWCG-HPST-ILEVNMKGEVLSKTEFETGI------ERPHAQFRQINKNKKGNYLVPLF 161 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s~-~~~~-~~~~~~~G~~~~~~~~~~~~------~~~~~~~~~~~~s~dG~~i~~g~ 161 (294)
...+...+....++++++....... +... .+....+|+ ++........ .........+.|+|||+++++++
T Consensus 264 i~~~g~~~~~~~~~~~~~~~ai~~~~~~~~~~v~~~~~g~-v~~vd~~~~~~~~v~~i~~~~~~~d~~fdpdGr~l~va~ 342 (543)
T 1nir_A 264 VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK-VLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAA 342 (543)
T ss_dssp EECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE-EEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEE
T ss_pred ECCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCE-EEEEEECCCCCCEEEEECCCCCCCCEEECCCCCEEEEEC
T ss_conf 6247877565350688824689861679889999646880-789980266641467865554430315888888899986
Q ss_pred -CCCEEEEEECC-CCEEEEEECCCEE----EEEEEECCCCEEEECC--CCCEEEEEECCCC-------EEEEEECCCCCC
Q ss_conf -69889999378-8588985169734----8988734896899735--8987999987898-------599984488764
Q T0558 162 -ATSEVREIAPN-GQLLNSVKLSGTP----FSSAFLDNGDCLVACG--DAHCFVQLNLESN-------RIVRRVNANDIE 226 (294)
Q Consensus 162 -~d~~i~~~d~~-g~~~~~~~~~~~~----~~~~~~~~g~~~v~~~--~~~~i~~~d~~~g-------~~~~~~~~~~~~ 226 (294)
.++.+.++|.. ++.+.....+..+ ......+++..+.+.. .++.+.+++.... +++.++..+...
T Consensus 343 ~~~n~v~ViD~~t~k~va~i~~g~~ph~~~~~~~~~p~~g~v~~~~~lg~~~Vs~i~~~~~~~~d~~wk~v~~i~~~g~g 422 (543)
T 1nir_A 343 NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG 422 (543)
T ss_dssp GGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC
T ss_pred CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 88984777853678189987058888998760225689986640256888368640336566755155797998657998
Q ss_pred CEEECCCCC--EEE-----CCC----CCEEEEECCCCEEE----C------CCCCCCEE--EEECCCCCEEE
Q ss_conf 114113453--489-----389----98999804677143----0------24777569--99908998999
Q T0558 227 GVQLFFVAQ--LFP-----LQN----GGLYICNWQGHDRE----A------GKGKHPQL--VEIDSEGKVVW 275 (294)
Q Consensus 227 ~~~~~~~~~--~~~-----~~~----G~i~i~~~~~~~~~----~------~~~~~~~~--~~i~~~G~~vW 275 (294)
...+.+.++ ... .++ ..+.+++....++. . ......++ +++++||+.+|
T Consensus 423 ~~fv~~~Pds~~lwVd~~~~pd~~~~~tv~V~D~~t~~~v~tl~p~~~~~~~~~~~~rv~h~eFs~dG~~v~ 494 (543)
T 1nir_A 423 SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp CCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred CEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHCCCCCCCCCEEEEEECCCCCEEE
T ss_conf 178998899985999657798812178699998998855629960235225677885379758989999999
No 82
>3gfc_A Histone-binding protein RBBP4; structural genomics, structural genomics consortium, SGC, acetylation, cell cycle, chromatin regulator; 2.30A {Homo sapiens} PDB: 3c99_A 3c9c_A 3cfs_B 3cfv_B
Probab=99.58 E-value=2.7e-12 Score=105.21 Aligned_cols=202 Identities=9% Similarity=-0.006 Sum_probs=141.1
Q ss_pred EEECCCCCCCCEEEEECCCCEEE-EE--CCEEEEEECCCCCE----------EEEECCCCCCEEEEEECCC-CCEEEEEE
Q ss_conf 99449987311647907983998-41--88289975267703----------6772377763148787378-75899970
Q T0558 48 EYPLEKGWECNSVAATKAGEILF-SY--SKGAKMITRDGREL----------WNIAAPAGCEMQTARILPD-GNALVAWC 113 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~~pdG~~l~-s~--~~~v~~~~~~~~~~----------~~~~~~~~~~v~~~~~~~d-g~~l~~~s 113 (294)
+.++.|...+..+.+.|++..++ ++ ++.+++|+...... ...+.+|...+.++.|.|+ ++++++++
T Consensus 118 ~~~i~h~g~vn~i~~~P~~~~lvat~s~~g~v~i~~~~~~~~~~~~~~~~~~~~~l~gH~~~v~~l~w~~~~~~~l~sgs 197 (425)
T 3gfc_A 118 EIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSAS 197 (425)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC----CCCSEEEECCSSCCCCEEECSSSTTEEEEEC
T ss_pred EEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEE
T ss_conf 99936798385459889999799998899809998378886655655566445798377898889997579999899996
Q ss_pred CCCCEEEEECCCCCEEEEE-ECCCCCCCCCCCCCEEEECCCC-CEEEEEECCCEEEEEECCC----CEEEEEE-CCCEEE
Q ss_conf 5897999985689588999-7067767766740089996998-9999974698899993788----5889851-697348
Q T0558 114 GHPSTILEVNMKGEVLSKT-EFETGIERPHAQFRQINKNKKG-NYLVPLFATSEVREIAPNG----QLLNSVK-LSGTPF 186 (294)
Q Consensus 114 ~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~s~dG-~~i~~g~~d~~i~~~d~~g----~~~~~~~-~~~~~~ 186 (294)
.|+.+.+|+........+. .......+|...+..+.|+|++ .++++++.|+.+++||... +...... +...+.
T Consensus 198 ~dg~I~lWd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~~s~s~dg~v~~~d~r~~~~~~~~~~~~~~~~~v~ 277 (425)
T 3gfc_A 198 DDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVN 277 (425)
T ss_dssp TTSCEEEEEGGGSCTTCCEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCTTSCSEEEECCSSCEE
T ss_pred CCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89908985202565210111113576267788612898004798568874011121111111112222211101112233
Q ss_pred EEEEECCCC-EEEECCCCCEEEEEECCCCEEE-EEECCCCCCCEEECCCCC---EEE--CCCCCEEEEEC
Q ss_conf 988734896-8997358987999987898599-984488764114113453---489--38998999804
Q T0558 187 SSAFLDNGD-CLVACGDAHCFVQLNLESNRIV-RRVNANDIEGVQLFFVAQ---LFP--LQNGGLYICNW 249 (294)
Q Consensus 187 ~~~~~~~g~-~~v~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~---~~~--~~~G~i~i~~~ 249 (294)
.+.+.+++. .+++++.++.+.+||.++++.. ..+..+......+.+.+. +.. ..||.+.+|+.
T Consensus 278 ~~~~~~~~~~~~~~gs~dg~i~i~D~~~~~~~~~~~~~~~~~V~~v~~~p~~~~~las~~~Dg~i~iWdl 347 (425)
T 3gfc_A 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347 (425)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTSTTSCCEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEEG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 2212121111001343321012111122100001202443210145407865645400068997999989
No 83
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetical protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.57 E-value=6.3e-13 Score=109.78 Aligned_cols=190 Identities=5% Similarity=-0.145 Sum_probs=112.0
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEE----------EECCCCCCCCEEEEECCCCEEEEE-CCEEEEEECCCCC-EEE
Q ss_conf 8885899974798699998878829999----------944998731164790798399841-8828997526770-367
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVWE----------YPLEKGWECNSVAATKAGEILFSY-SKGAKMITRDGRE-LWN 88 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w~----------~~~~~~~~~~~~~~~pdG~~l~s~-~~~v~~~~~~~~~-~~~ 88 (294)
....+|++++.|+.+++||..+++..-+ ....+...+.++++.|++.+++.+ ++.+.+|+..... ...
T Consensus 223 ~~~~~La~~~~dg~v~iw~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~g~~d~~~~i~~~~~~~~~~~ 302 (524)
T 2j04_B 223 HLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSF 302 (524)
T ss_dssp SSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSE
T ss_pred CCCCEEEEEECCCCEEEEECCCCCCCCEEEEECCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEE
T ss_conf 55765999977998899964466555202220143036404898876987717998599997789708995789840148
Q ss_pred EECCCCCCEEEEEE---CCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCE
Q ss_conf 72377763148787---378758999705897999985689588999706776776674008999699899999746988
Q T0558 89 IAAPAGCEMQTARI---LPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSE 165 (294)
Q Consensus 89 ~~~~~~~~v~~~~~---~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~ 165 (294)
....+...+....+ .+++.++++++.|+.+.+|+..+++........ .+...+.++.++|+++++++++.++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~ 378 (524)
T 2j04_B 303 YDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR----FRGSNLVPVVYCPQIYSYIYSDGASS 378 (524)
T ss_dssp EEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE----CSCCSCCCEEEETTTTEEEEECSSSE
T ss_pred EECCCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCEEEECC----CCCCCEEEEEECCCCCEEEEECCCCC
T ss_conf 82355463522189816999838998769985999989998512589615----75354478886689870564136775
Q ss_pred EEEEECC-CCEEEEE-ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCC
Q ss_conf 9999378-8588985-16973489887348968997358987999987898
Q T0558 166 VREIAPN-GQLLNSV-KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN 214 (294)
Q Consensus 166 i~~~d~~-g~~~~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g 214 (294)
+++|+.. +...... .+...+.++.++|++.++++++.|+.|++||...+
T Consensus 379 i~~~~~~~~~~~~~~~~h~~~i~~l~~s~~~~~l~sgs~Dg~i~iwn~~~~ 429 (524)
T 2j04_B 379 LRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred EEEECCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCC
T ss_conf 277436665020002687888435898898999999979898999978766
No 84
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.57 E-value=3.2e-13 Score=111.89 Aligned_cols=262 Identities=10% Similarity=0.046 Sum_probs=163.7
Q ss_pred CCCCC-EEEEE----------CCCCEEEEEECCCCEEEEEE-ECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCC-
Q ss_conf 78885-89997----------47986999988788299999-44998731164790798399841--882899752677-
Q T0558 20 SSPQH-LLVGG----------SGWNKIAIINKDTKEIVWEY-PLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGR- 84 (294)
Q Consensus 20 s~~~~-~l~~g----------s~~~~i~~~d~~tg~~~w~~-~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~- 84 (294)
|+++. +|++| |.++.+.+||..+++..... .......+++++|+|||.+|+++ |+.+++|+....
T Consensus 21 sp~~~~~la~g~~~g~~~~~~s~d~~~~iw~~~~~~~~~~~~~~~~~~~v~~l~wS~d~~~la~g~~dg~i~lwd~~~~~ 100 (416)
T 2pm9_A 21 SHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEAN 100 (416)
T ss_dssp CSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTT
T ss_pred CCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCC
T ss_conf 99999789998067978885559996999958999975277760489987999997999999999698959999898898
Q ss_pred ---CEEEEECCCCCCEEEEEECC-CCCEEEEEECCCCEEEEECCCCCEEEE---EECCCCCCCCCCCCCEEEECCCC-CE
Q ss_conf ---03677237776314878737-875899970589799998568958899---97067767766740089996998-99
Q T0558 85 ---ELWNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNMKGEVLSK---TEFETGIERPHAQFRQINKNKKG-NY 156 (294)
Q Consensus 85 ---~~~~~~~~~~~~v~~~~~~~-dg~~l~~~s~~~~~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~s~dG-~~ 156 (294)
.......+|...+.+++|+| ++++|++++.|+.+.+|+..++..... .........+.....++.+++++ .+
T Consensus 101 ~~~~~~~~~~~H~~~V~~l~f~p~~~~~l~sgs~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (416)
T 2pm9_A 101 NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHV 180 (416)
T ss_dssp SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTE
T ss_pred CCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEE
T ss_conf 86226799768789889999966899699999589978998404665333222453120561578985899986999909
Q ss_pred EEEEECCCEEEEEECCCCE-EEEEE-------CCCEEEEEEEECCCCEEEE----CCCCCEEEEEECCCCEE-EEE-ECC
Q ss_conf 9997469889999378858-89851-------6973489887348968997----35898799998789859-998-448
Q T0558 157 LVPLFATSEVREIAPNGQL-LNSVK-------LSGTPFSSAFLDNGDCLVA----CGDAHCFVQLNLESNRI-VRR-VNA 222 (294)
Q Consensus 157 i~~g~~d~~i~~~d~~g~~-~~~~~-------~~~~~~~~~~~~~g~~~v~----~~~~~~i~~~d~~~g~~-~~~-~~~ 222 (294)
+++++.|+.+.+||..... ..... +...+..+.+.+++..+++ ...++.+.+|+.++.+. +.. ..+
T Consensus 181 l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~ 260 (416)
T 2pm9_A 181 FASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQG 260 (416)
T ss_dssp EEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSC
T ss_pred EEEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECC
T ss_conf 99971886268887688960035543210246654320475226764023443100235760687437897304775057
Q ss_pred CCCCCEEECCCC---CEE--ECCCCCEEEEECCCCE-EECCCCC------------CCEEEE-ECCCCCE-EEEEECCC
Q ss_conf 876411411345---348--9389989998046771-4302477------------756999-9089989-99983588
Q T0558 223 NDIEGVQLFFVA---QLF--PLQNGGLYICNWQGHD-REAGKGK------------HPQLVE-IDSEGKV-VWQLNDKV 281 (294)
Q Consensus 223 ~~~~~~~~~~~~---~~~--~~~~G~i~i~~~~~~~-~~~~~~~------------~~~~~~-i~~~G~~-vW~~~~~~ 281 (294)
|......+.+.+ .+. ...||.+.+|+..... +....++ ...+++ -..||.+ ||++++..
T Consensus 261 H~~~v~~l~~~~~~~~~l~s~~~Dg~i~iwd~~~~~~l~~l~~h~~~V~~v~~sp~~~~llas~s~Dg~i~iw~l~~~~ 339 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCC
T ss_conf 7574679997599983799984899899999999909999918999899999979999299999489949999689999
No 85
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.56 E-value=4.5e-11 Score=96.28 Aligned_cols=160 Identities=8% Similarity=-0.000 Sum_probs=75.0
Q ss_pred CEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CC--EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCE
Q ss_conf 8699998878829999944998731164790798399841--88--2899752677036772377763148787378758
Q T0558 33 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SK--GAKMITRDGRELWNIAAPAGCEMQTARILPDGNA 108 (294)
Q Consensus 33 ~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~ 108 (294)
+.+++++...+... + +.+...+..++++|||+.++.. +. .+.+|+..++... ....+...+..++|+|||++
T Consensus 317 G~~~~~~~~g~~~~-~--~~~~~~~~~~~~spDg~~l~~~~~~~g~~~~~~~~~~g~~~-~l~~~~~~v~~~~~SPDG~~ 392 (1045)
T 1k32_A 317 GQAFIQDVSGTYVL-K--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKF 392 (1045)
T ss_dssp TEEEEECTTSSBEE-E--CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSE
T ss_pred CCEEEECCCCCEEE-E--EECCCCCCCCEECCCCEEEEEECCCCCEEEEEEECCCCCEE-EECCCCCCEEEEEECCCCCE
T ss_conf 80899518896579-8--41145423302136741999971788328999968999535-61046785246588899999
Q ss_pred EEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE----------CCCEEEEEECCCCEEEE
Q ss_conf 99970589799998568958899970677677667400899969989999974----------69889999378858898
Q T0558 109 LVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF----------ATSEVREIAPNGQLLNS 178 (294)
Q Consensus 109 l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~----------~d~~i~~~d~~g~~~~~ 178 (294)
+++++.+..+.+|+..+|+...... .+...+..++|||||++|+.+. ....|++||.++.....
T Consensus 393 la~~~~~~~l~~~d~~tg~~~~l~~------~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~I~l~d~~~~~~~~ 466 (1045)
T 1k32_A 393 AVVANDRFEIMTVDLETGKPTVIER------SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA 466 (1045)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEE------CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEC------CCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEE
T ss_conf 9999799859999889991789742------7988745717989978898732456655677676669999999996898
Q ss_pred E-ECCCEEEEEEEECCCCEEEECCC
Q ss_conf 5-16973489887348968997358
Q T0558 179 V-KLSGTPFSSAFLDNGDCLVACGD 202 (294)
Q Consensus 179 ~-~~~~~~~~~~~~~~g~~~v~~~~ 202 (294)
. .......+..++|||+.++..+.
T Consensus 467 lt~~~~~~~~p~~SpDG~~L~f~s~ 491 (1045)
T 1k32_A 467 ATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CSCSSSBEEEEEECTTSCEEEEEES
T ss_pred EECCCCCEEEEEECCCCCEEEEEEC
T ss_conf 7379981588899899998899977
No 86
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A
Probab=99.56 E-value=2.5e-12 Score=105.37 Aligned_cols=229 Identities=9% Similarity=-0.012 Sum_probs=149.7
Q ss_pred EECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCC--CEEEEECCCCCCEEEEEEC--CCCCEEEEEECCCCEEEEE
Q ss_conf 944998731164790798399841--882899752677--0367723777631487873--7875899970589799998
Q T0558 49 YPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGR--ELWNIAAPAGCEMQTARIL--PDGNALVAWCGHPSTILEV 122 (294)
Q Consensus 49 ~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~--~~~~~~~~~~~~v~~~~~~--~dg~~l~~~s~~~~~~~~~ 122 (294)
....|...+++++|+|+|++|+++ |+.+++|+..++ ++.....+|...+.+++|+ ++++++++++.|+.+.+|+
T Consensus 4 i~~~H~~~V~~i~f~~~G~~lat~s~D~~i~iWd~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~l~s~~~dg~i~iwd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred ECCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCEEEE
T ss_conf 44621582699999899999999917992999974499851889992889998899996089998999993689828966
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCEEEECC--CCCEEEEEECCCEEEEEECCC-CEE--EEE-ECCCEEEEEEE------
Q ss_conf 568958899970677677667400899969--989999974698899993788-588--985-16973489887------
Q T0558 123 NMKGEVLSKTEFETGIERPHAQFRQINKNK--KGNYLVPLFATSEVREIAPNG-QLL--NSV-KLSGTPFSSAF------ 190 (294)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~--dG~~i~~g~~d~~i~~~d~~g-~~~--~~~-~~~~~~~~~~~------ 190 (294)
..+++....... ..+...+.++.++| ++.++++++.|+.+++|+... ... ... .....+.++.+
T Consensus 84 ~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (297)
T 2pm7_B 84 EENGRWSQIAVH----AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp BSSSCBCCCEEE----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EECCCCEEEEEE----ECCCCEEEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 405861012575----0434506644454113333158870688840475044510000011344566505786566434
Q ss_pred -------ECCCCEEEECCCCCEEEEEECCCC----EEEEEECCCCCCCEEECCCCC-----EE--ECCCCCEEEEECCCC
Q ss_conf -------348968997358987999987898----599984488764114113453-----48--938998999804677
Q T0558 191 -------LDNGDCLVACGDAHCFVQLNLESN----RIVRRVNANDIEGVQLFFVAQ-----LF--PLQNGGLYICNWQGH 252 (294)
Q Consensus 191 -------~~~g~~~v~~~~~~~i~~~d~~~g----~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~G~i~i~~~~~~ 252 (294)
.+++..+++++.++.+.+++...+ .+...+..+......+.+.+. .. ...||.+.+|+....
T Consensus 160 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~~~l~s~s~D~~i~vw~~~~~ 239 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCEEEEEECCCC
T ss_conf 43221234566489999379947887517885201121243145676404998998655633131349998999956588
Q ss_pred EE------ECCCCCCC--EEEEECCCCCEEEEEECCC
Q ss_conf 14------30247775--6999908998999983588
Q T0558 253 DR------EAGKGKHP--QLVEIDSEGKVVWQLNDKV 281 (294)
Q Consensus 253 ~~------~~~~~~~~--~~~~i~~~G~~vW~~~~~~ 281 (294)
.. .....+.. .-++++++|+.+-.-....
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~t~~~Dg 276 (297)
T 2pm7_B 240 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (297)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS
T ss_pred CCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 8826799860489888889999979999999997899
No 87
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., structural genomics, PSI-2; 2.00A {Methanococcus maripaludis C7}
Probab=99.56 E-value=1.2e-12 Score=107.87 Aligned_cols=245 Identities=14% Similarity=0.079 Sum_probs=141.9
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEECCEEEEEECCCCCEEEEECCCCCCEEEEEE
Q ss_conf 85899974798699998878829999944998731164790798399841882899752677036772377763148787
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARI 102 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 102 (294)
+..++.++.++.|+++|. +|+++|+++++.... ..+++.+||.+ +.+.+.++.++.+++.+|++..+... ..++
T Consensus 30 dg~v~v~~~~g~v~a~d~-~G~~~W~~~~~~~~~-~~~~~~~dg~v-~~g~~~l~~ld~~G~~~w~~~~~~~~-~s~~-- 103 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAINT-DGSVKWFFKSGEIIE-CRPSIGKDGTI-YFGSDKVYAINPDGTEKWRFDTKKAI-VSDF-- 103 (330)
T ss_dssp TSCEECSSTTTTTEEECT-TSCEEESSCGGGEEE-ECCEETTTTEE-CCSSCEEEEECCCGGGGGGSCC------CCE--
T ss_pred CCEEEEECCCCEEEEEEC-CCCEEEEEECCCCCE-EEEEECCCCEE-EEECCCEEEECCCCCEEEEEECCCCC-EEEE--
T ss_conf 999999929996999989-999999998999817-62399489999-99789699997999899999469982-6768--
Q ss_pred CCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECC
Q ss_conf 37875899970589799998568958899970677677667400899969989999974698899993788588985169
Q T0558 103 LPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLS 182 (294)
Q Consensus 103 ~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~~~~~~~ 182 (294)
...++.+++++.++.+++++ .+|+.+|++........ .....+++ .++.+..++.++.++..++..|.....
T Consensus 104 ~~~~~~v~v~~~dg~l~~~d-~~G~~~W~~~~~~~~~~------~p~~~~~~-~i~~~~~~~~v~~~~~~g~~~~~~~~~ 175 (330)
T 3hxj_A 104 TIFEDILYVTSMDGHLYAIN-TDGTEKWRFKTKKAIYA------TPIVSEDG-TIYVGSNDNYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp EEETTEEEEECTTSEEEEEC-TTSCEEEEEECSSCCCS------CCEECTTS-CEEEECTTSEEEEECTTSCEEEEEECS
T ss_pred EEECCEEEEECCCCCEEEEC-CCCCEEEEECCCCCCCC------CCCCCCCC-EEEECCCCCCEEEECCCCCEEEEEECC
T ss_conf 99899999987999889884-79966776323574103------65311132-145113788257898999789887134
Q ss_pred CEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCE--EECCCCCEEEEECCCCE-------
Q ss_conf 734898873489689973589879999878985999844887641141134534--89389989998046771-------
Q T0558 183 GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQL--FPLQNGGLYICNWQGHD------- 253 (294)
Q Consensus 183 ~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~G~i~i~~~~~~~------- 253 (294)
..+.+.+.......++.++ +.++.++...++..+.................. ....+|.++..+.++..
T Consensus 176 ~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~v~~~d~~g~~~W~~~~~ 253 (330)
T 3hxj_A 176 DAITSAASIGKDGTIYFGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTG 253 (330)
T ss_dssp SCCCSCCEECTTCCEEEES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEECS
T ss_pred CCEEECEEECCCCEEEEEC--CEEEEEECCCCEEEEEECCCCEEEEEEEECCCCEEECCCCCEEEEEECCCCEEEEEEEC
T ss_conf 5201000022697799962--32588704773024684488405542110025136617996899998357205899751
Q ss_pred -------------EECCCCCCCEEEEECCCCCEEEEEECCCCE
Q ss_conf -------------430247775699990899899998358853
Q T0558 254 -------------REAGKGKHPQLVEIDSEGKVVWQLNDKVKF 283 (294)
Q Consensus 254 -------------~~~~~~~~~~~~~i~~~G~~vW~~~~~~~~ 283 (294)
.......++.++++|++|+++|++.....+
T Consensus 254 ~~~~~~~~~~~~~~v~~~~~~G~l~~~d~~G~~~w~~~~~~~~ 296 (330)
T 3hxj_A 254 KRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWI 296 (330)
T ss_dssp SCCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCC
T ss_pred CCCCCCCEEECCCEEEEECCCCEEEEEECCCCEEEEEECCCCC
T ss_conf 6731004795899999996899999997999999999899974
No 88
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.55 E-value=5.5e-10 Score=88.34 Aligned_cols=187 Identities=8% Similarity=0.021 Sum_probs=119.0
Q ss_pred CCCCEEEEECCCCEEEEEECCC-CEEEEEEECCCCCCCCEEEEECCCCEEEEE---CCEEEEEECCCC--CE-EEEECCC
Q ss_conf 8885899974798699998878-829999944998731164790798399841---882899752677--03-6772377
Q T0558 21 SPQHLLVGGSGWNKIAIINKDT-KEIVWEYPLEKGWECNSVAATKAGEILFSY---SKGAKMITRDGR--EL-WNIAAPA 93 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~t-g~~~w~~~~~~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~~~~--~~-~~~~~~~ 93 (294)
..+.++++++.+++|.+||.++ |++.-...++.+..+..++|+|||++|+.. ++.+.+|+.+.. .+ .......
T Consensus 3 ~~~~vyv~~~~~~~I~v~~l~~~g~l~~~~~~~~~~~v~~la~SpDg~~L~v~~~~~~~v~~~~id~~~g~~~~~~~~~~ 82 (343)
T 1ri6_A 3 LKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp CEEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred CCCEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCC
T ss_conf 64499998799992899998599977999997479977279993898999999868996999999799970888311025
Q ss_pred CCCEEEEEECCCCCEEEEEECCC-CEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE-CCCEEEEEEC
Q ss_conf 76314878737875899970589-799998568958899970677677667400899969989999974-6988999937
Q T0558 94 GCEMQTARILPDGNALVAWCGHP-STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF-ATSEVREIAP 171 (294)
Q Consensus 94 ~~~v~~~~~~~dg~~l~~~s~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~-~d~~i~~~d~ 171 (294)
...+..++++|||+++++++.+. .+.++...++............ ....++.++||+++++... .+..+..|+.
T Consensus 83 ~~~p~~va~spdG~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~v~~spd~~~~~~~~~~~~~v~~~~~ 158 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL----DGCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC----TTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CCCCEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCC----CCCEEEEEEECCCCCEEEEECCCEEEEEEE
T ss_conf 9995499998999999999567885310000001221011014789----873499998504431243201211569985
Q ss_pred CC--CEEE------EEECCCEEEEEEEECCCCEEEEC-CCCCEEEEEEC
Q ss_conf 88--5889------85169734898873489689973-58987999987
Q T0558 172 NG--QLLN------SVKLSGTPFSSAFLDNGDCLVAC-GDAHCFVQLNL 211 (294)
Q Consensus 172 ~g--~~~~------~~~~~~~~~~~~~~~~g~~~v~~-~~~~~i~~~d~ 211 (294)
.. .... .......+..+.+.+++..++.. ...+...+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~v~~~ 207 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL 207 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred CCCCCEEEEECCEEECCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEC
T ss_conf 6998244310101541788885267861677348998504574200000
No 89
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.54 E-value=3.3e-10 Score=89.92 Aligned_cols=200 Identities=14% Similarity=0.094 Sum_probs=133.8
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCE--EEEEEECCCCCCCCEEEEEC----CCCEEEEE---CCEEEEEECCCCCEE
Q ss_conf 0147888589997479869999887882--99999449987311647907----98399841---882899752677036
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKE--IVWEYPLEKGWECNSVAATK----AGEILFSY---SKGAKMITRDGRELW 87 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~--~~w~~~~~~~~~~~~~~~~p----dG~~l~s~---~~~v~~~~~~~~~~~ 87 (294)
..+|++++++++++.|+.|.+||..|++ ++.+.+. +.....++++| ||++++++ ++++.+||....++.
T Consensus 202 v~fSpDGr~lyv~srDg~v~~iDl~t~k~~~v~~i~~--g~~~~~ia~S~~~s~DGk~l~v~n~~~~tv~v~D~~t~~~~ 279 (567)
T 1qks_A 202 SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE
T ss_pred EEECCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEC--CCCCCCEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEE
T ss_conf 9986899979996168957999942797327886403--78877558786537888889999446994999989989624
Q ss_pred EEECCC-----------CCCEEEEEECCCCCEEEEEECCCC-EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC
Q ss_conf 772377-----------763148787378758999705897-99998568958899970677677667400899969989
Q T0558 88 NIAAPA-----------GCEMQTARILPDGNALVAWCGHPS-TILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN 155 (294)
Q Consensus 88 ~~~~~~-----------~~~v~~~~~~~dg~~l~~~s~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~ 155 (294)
+....+ ...+.++..+|+++.++++..+.. +.+++..+.+.+....... ......+.++|||+
T Consensus 280 ~~i~~~~~~v~~~~~~~~~r~~av~~s~d~~~~vva~kdtg~I~~vD~~~~~~l~v~~i~~-----~~~~~d~~~dpdgr 354 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA-----ERFLHDGGLDGSHR 354 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC-----CSSEEEEEECTTSC
T ss_pred EEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEECCCCCCCEEEEECC-----CCCCCCCEECCCCC
T ss_conf 7985588643442206787502478769999899998038979999786676640588425-----66667510889888
Q ss_pred EEEEEE-CCCEEEEEECC-CCEEEEEECCCE-EE----EEEEECCCCEEEECC--CCCEEEEEECC-------CCEEEEE
Q ss_conf 999974-69889999378-858898516973-48----988734896899735--89879999878-------9859998
Q T0558 156 YLVPLF-ATSEVREIAPN-GQLLNSVKLSGT-PF----SSAFLDNGDCLVACG--DAHCFVQLNLE-------SNRIVRR 219 (294)
Q Consensus 156 ~i~~g~-~d~~i~~~d~~-g~~~~~~~~~~~-~~----~~~~~~~g~~~v~~~--~~~~i~~~d~~-------~g~~~~~ 219 (294)
++++++ .++.|.++|.. ++.......... +. .....+++..+.+.+ .+..+.+++.. .-+++++
T Consensus 355 ~~~va~~~~~~v~viD~~~~~~va~i~~g~~~ph~~~~~~~~~p~~g~v~~~~~lg~~~v~~i~~~~~~~~~~~WkvV~~ 434 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDS 434 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEE
T ss_conf 78977168985899934566688986427745566553230769996177657889836874003876675456739899
Q ss_pred ECCC
Q ss_conf 4488
Q T0558 220 VNAN 223 (294)
Q Consensus 220 ~~~~ 223 (294)
+...
T Consensus 435 i~~~ 438 (567)
T 1qks_A 435 FPAL 438 (567)
T ss_dssp EECS
T ss_pred EECC
T ss_conf 7146
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetical protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.54 E-value=6.6e-14 Score=116.94 Aligned_cols=223 Identities=9% Similarity=-0.079 Sum_probs=157.2
Q ss_pred CCCCEEEEECCCCEEEEEECCCC----EEEEEEECCCCCCCCEEEEECCCC------EEEE--ECCEEEEEECCCCCE--
Q ss_conf 88858999747986999988788----299999449987311647907983------9984--188289975267703--
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTK----EIVWEYPLEKGWECNSVAATKAGE------ILFS--YSKGAKMITRDGREL-- 86 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg----~~~w~~~~~~~~~~~~~~~~pdG~------~l~s--~~~~v~~~~~~~~~~-- 86 (294)
+....+.+++.++.|.+|+.... +.+.... .+...+.++.|.|++. +|++ .|+.+++|+......
T Consensus 171 ~~~~~~~s~~~~~~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~l~~~p~~~~~~~~~~La~~~~dg~v~iw~i~~~~~~~ 249 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV-HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEEEEEEEE-ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred CCCCEEECCCCCCEEEEEECCCCCCCEEEEEEEE-CCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCC
T ss_conf 6500241158998899995468886328999986-147976677742665555557659999779988999644665552
Q ss_pred ---------EEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEE---EECCCC
Q ss_conf ---------67723777631487873787589997058979999856895889997067767766740089---996998
Q T0558 87 ---------WNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQI---NKNKKG 154 (294)
Q Consensus 87 ---------~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~---~~s~dG 154 (294)
.....++...+.++.+.++ ..+++++.|+.+.+|+...++....... .+...+... ..++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~g~~d~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 323 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQ-----VHDSYILSVSTAYSDFED 323 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEE-----CSSSCEEEEEEECCTTSC
T ss_pred EEEEECCCEEEEECCCCCCEEEEEECCC-CEEEEEECCCCEEEEECCCCCEEEEEEC-----CCCCCEEEEEEEECCCCC
T ss_conf 0222014303640489887698771799-8599997789708995789840148823-----554635221898169998
Q ss_pred CEEEEEECCCEEEEEECCCC----EEEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEE
Q ss_conf 99999746988999937885----88985169734898873489689973589879999878985999844887641141
Q T0558 155 NYLVPLFATSEVREIAPNGQ----LLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQL 230 (294)
Q Consensus 155 ~~i~~g~~d~~i~~~d~~g~----~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 230 (294)
.++++++.|+++++||.... ..........+..+.++|++..+++++.++.+.+|+..++........+......+
T Consensus 324 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~h~~~i~~l 403 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAI 403 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEE
T ss_pred CEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCEEEECCCCCCCCCEEE
T ss_conf 38998769985999989998512589615753544788866898705641367752774366650200026878884358
Q ss_pred CCCCCEE----ECCCCCEEEEECC
Q ss_conf 1345348----9389989998046
Q T0558 231 FFVAQLF----PLQNGGLYICNWQ 250 (294)
Q Consensus 231 ~~~~~~~----~~~~G~i~i~~~~ 250 (294)
.+.+.-. ...||++.+|+..
T Consensus 404 ~~s~~~~~l~sgs~Dg~i~iwn~~ 427 (524)
T 2j04_B 404 GVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp ECCSSCCBCEEEETTTEEECCBSC
T ss_pred EECCCCCEEEEEECCCEEEEEECC
T ss_conf 988989999999798989999787
No 91
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, cell migration, acetylation, actin-binding, cytoplasm, phosphoprotein; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A*
Probab=99.52 E-value=1.5e-12 Score=107.11 Aligned_cols=188 Identities=6% Similarity=-0.078 Sum_probs=107.0
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCC----C------
Q ss_conf 01478885899974798699998878829999944998731164790798399841--88289975267----7------
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDG----R------ 84 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~----~------ 84 (294)
+-.|++.+.+++|++|..+.+|+..++..+|... +...+..+.++||++++++. |.++++|+... .
T Consensus 102 ~l~s~~~g~~lsas~d~~~~~~~~~~~~~~~t~~--~~~~~~~~~~S~d~k~~a~~s~d~~~~lw~~~~~~~g~d~~~~l 179 (493)
T 3llp_A 102 SLQSEAHRRYFGGTEDRLSCFAQTVSPAEKWSVH--IAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITL 179 (493)
T ss_dssp EEEETTTCCEEEEEBTEEEEEESSCCGGGCEEEE--ECSCCEEEEEETTTTEEEEEEC--CCEEEEEESSCCSGGGCEEE
T ss_pred EEEECCCCEEEECCCCCCEEEEECCCHHHHHEEC--CCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEE
T ss_conf 9996799979982588735733149842632032--46726999996898769992488851896568845541307999
Q ss_pred ---------------------CEEEE--------ECCCCCCEEEEEE-CCCCCEEEEEECCCCEEEEECCCCCEEEEEEC
Q ss_conf ---------------------03677--------2377763148787-37875899970589799998568958899970
Q T0558 85 ---------------------ELWNI--------AAPAGCEMQTARI-LPDGNALVAWCGHPSTILEVNMKGEVLSKTEF 134 (294)
Q Consensus 85 ---------------------~~~~~--------~~~~~~~v~~~~~-~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~ 134 (294)
.+|.. ...+.. .+++ +|+|++|++++.+.++.+|+...+.....|.+
T Consensus 180 ~f~~g~y~~~t~d~k~l~~~~~l~~~~~~~~~~~l~~~~~---~va~~s~~Gk~La~~g~d~tlr~w~~~~~g~~e~f~l 256 (493)
T 3llp_A 180 AFQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRSG---KVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFAL 256 (493)
T ss_dssp EECSSSEEEECTTSCEECTTSCEESSCCGGGCBEEEEC-----CEEEECTTSCBEEEETTTTEEEECC---CCGGGCEEE
T ss_pred EECCCEEEEECCCCCEECCCCEEEECCCCCCEEEEEECCC---EEEEECCCCCEEEECCCCCEEEECCCCCCCCEEEEEE
T ss_conf 9778727787577730766876976258881799996585---8998989999997338997078424688874058886
Q ss_pred CCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEEC-CCEEEEEEEECCCCEEEECCCCCEEEEEECC
Q ss_conf 67767766740089996998999997469889999378-858898516-9734898873489689973589879999878
Q T0558 135 ETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL-SGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 212 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~ 212 (294)
+......+.++|||+++++.+.+..+..||.. +.+..++.. .+......++++|+++.+.+.+..+..++..
T Consensus 257 ------~~s~~~~~~~s~ngk~vs~~s~~~v~a~~d~~~~~e~fqle~~~~~~~~~~~s~~gky~~~~s~~~i~~~~~~~ 330 (493)
T 3llp_A 257 ------EQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTASSK 330 (493)
T ss_dssp ------EECCCEEEEECTTSCEEECC-CCCCEEEESCCSGGGCEEEEECTTTCCEEEECTTSCEEEECTTSBEEEEESSC
T ss_pred ------ECCCCEEEEECCCCCEEEECCCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEECCCCCEEECCCCC
T ss_conf ------15897799996799999986588589820368975899999579873899998999999988899789734568
Q ss_pred CCE
Q ss_conf 985
Q T0558 213 SNR 215 (294)
Q Consensus 213 ~g~ 215 (294)
++.
T Consensus 331 ~~~ 333 (493)
T 3llp_A 331 NAS 333 (493)
T ss_dssp CGG
T ss_pred CCC
T ss_conf 983
No 92
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleoporin complex, nuclear pore complex, macromolecular assembly; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.51 E-value=2.5e-11 Score=98.08 Aligned_cols=201 Identities=8% Similarity=0.012 Sum_probs=128.2
Q ss_pred EEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCC----EEEEECCCCCCEEEEEECC--CCCEEEEEECCCCEE
Q ss_conf 9944998731164790798399841--8828997526770----3677237776314878737--875899970589799
Q T0558 48 EYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRE----LWNIAAPAGCEMQTARILP--DGNALVAWCGHPSTI 119 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~----~~~~~~~~~~~v~~~~~~~--dg~~l~~~s~~~~~~ 119 (294)
.+..+|...+.+++|+|||++|+++ |+.+++|+..... +.....+|...+.+++|.| .++++++++.|+.+.
T Consensus 5 ~~~~gH~~~V~~v~~sp~g~~lat~s~D~~v~iw~~~~~~~~~~~~~~~~~H~~~V~~v~f~~~~~~~~l~s~~~Dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred CCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCC
T ss_conf 65878788559999969999999992899399997579974328968971778988899992599998999992588841
Q ss_pred EEECCCCCEEE---EEECCCCCCCCCCCCCEEEECCC--CCEEEEEECCCEEEEEECC-CCEE--EEEE-----------
Q ss_conf 99856895889---99706776776674008999699--8999997469889999378-8588--9851-----------
Q T0558 120 LEVNMKGEVLS---KTEFETGIERPHAQFRQINKNKK--GNYLVPLFATSEVREIAPN-GQLL--NSVK----------- 180 (294)
Q Consensus 120 ~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~s~d--G~~i~~g~~d~~i~~~d~~-g~~~--~~~~----------- 180 (294)
+|+...++... ..........+...+.++.|+|+ +.++++++.|+.|++|+.. +..+ +...
T Consensus 85 iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 00100013442222322578965888862877732567888899993578840103453421100123321000000235
Q ss_pred -CCCEEEEEEEEC---CCCEEEECCCCCEEEEEECCCCEEE--EEECCCCCCCEEECCCCC------EE--ECCCCCEEE
Q ss_conf -697348988734---8968997358987999987898599--984488764114113453------48--938998999
Q T0558 181 -LSGTPFSSAFLD---NGDCLVACGDAHCFVQLNLESNRIV--RRVNANDIEGVQLFFVAQ------LF--PLQNGGLYI 246 (294)
Q Consensus 181 -~~~~~~~~~~~~---~g~~~v~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~~~~~------~~--~~~~G~i~i 246 (294)
.......+.+.+ ++..+++++.++.+.+++..+++.. .+..++......+.+.+. .. ...||.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~~~las~s~Dg~v~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEE
T ss_conf 66776237885202236862023304554147761278601301025766437789977887755111330046761899
Q ss_pred EE
Q ss_conf 80
Q T0558 247 CN 248 (294)
Q Consensus 247 ~~ 248 (294)
|+
T Consensus 245 wd 246 (351)
T 3f3f_A 245 FK 246 (351)
T ss_dssp EE
T ss_pred EE
T ss_conf 98
No 93
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.50 E-value=4.9e-09 Score=81.39 Aligned_cols=186 Identities=9% Similarity=-0.059 Sum_probs=118.7
Q ss_pred CCCCCCCCEEEE-E----CCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE------------CCEEEEE
Q ss_conf 014788858999-7----4798699998878829999944998731164790798399841------------8828997
Q T0558 17 AQGSSPQHLLVG-G----SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY------------SKGAKMI 79 (294)
Q Consensus 17 ~~~s~~~~~l~~-g----s~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~------------~~~v~~~ 79 (294)
.++|++.+.+++ . +...+|++||.++|+++.+.+.+ .. ..++++|||+.++.. +..+.+|
T Consensus 26 ~a~spDg~r~~v~~~~~~~~~~~v~v~D~~sg~~~~~~~~g--~~-~~va~SpDG~~l~va~~~~~~~~~g~r~~~V~v~ 102 (373)
T 2mad_H 26 EAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG--FL-PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVF 102 (373)
T ss_pred CCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECC--CC-CCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEE
T ss_conf 33289988899977864677457999999999899995078--88-8469999999899995555566557778989999
Q ss_pred ECCCCCEEE-EECCC------CCCEEEEEECCCCCEEEEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE
Q ss_conf 526770367-72377------763148787378758999705--897999985689588999706776776674008999
Q T0558 80 TRDGRELWN-IAAPA------GCEMQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINK 150 (294)
Q Consensus 80 ~~~~~~~~~-~~~~~------~~~v~~~~~~~dg~~l~~~s~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 150 (294)
|....+... ...+. ......+.++|||+++++... +..+.+|+..+++.+...... .+..+
T Consensus 103 D~~t~~~~~~i~~~~~~~~~~~~~p~~~a~spDg~~l~v~~~~~~~~v~v~d~~~~~~~~~~~~~----------~~~~~ 172 (373)
T 2mad_H 103 DPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSP----------TCYHI 172 (373)
T ss_pred ECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEEECCC----------CCEEE
T ss_conf 99999898999788887411378862079911998479860699945898856786498784378----------71799
Q ss_pred CCCCCE-EEEEECCCEEEEEECCCCEEEEEECC--------CEEEEEEEECCCCEEEECCCCCEEEEEECCCCEE
Q ss_conf 699899-99974698899993788588985169--------7348988734896899735898799998789859
Q T0558 151 NKKGNY-LVPLFATSEVREIAPNGQLLNSVKLS--------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 216 (294)
Q Consensus 151 s~dG~~-i~~g~~d~~i~~~d~~g~~~~~~~~~--------~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~ 216 (294)
++||+. +++.+.|+.+..++..+......... .........+++..++. ..++.++.++...++.
T Consensus 173 ~~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~v~v~~~~~~~~ 246 (373)
T 2mad_H 173 HPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGA 246 (373)
T ss_pred ECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEE-CCCCCEEEEECCCCEE
T ss_conf 3189928999878996999856897588776145556542554443046699739998-6998399998579907
No 94
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.50 E-value=8.2e-11 Score=94.37 Aligned_cols=179 Identities=10% Similarity=0.017 Sum_probs=129.9
Q ss_pred CCCCCCEEEEECCCCEEEEEECC-----------CCEEEEEEE----CCCCCCCCEEEEECCCCEEEEE------CCEEE
Q ss_conf 47888589997479869999887-----------882999994----4998731164790798399841------88289
Q T0558 19 GSSPQHLLVGGSGWNKIAIINKD-----------TKEIVWEYP----LEKGWECNSVAATKAGEILFSY------SKGAK 77 (294)
Q Consensus 19 ~s~~~~~l~~gs~~~~i~~~d~~-----------tg~~~w~~~----~~~~~~~~~~~~~pdG~~l~s~------~~~v~ 77 (294)
-++...+++.++.++ +.++..+ +.+ +|... ......+..++|+|||.+|+.. +..+.
T Consensus 44 vs~~~g~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~v~fs~dg~~La~~~~~~~~~~~i~ 121 (434)
T 2oit_A 44 VSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNK-IVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIA 121 (434)
T ss_dssp EETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTC-EEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEE
T ss_pred EECCCCEEEEECCCE-EEEEECHHHHHHHCCCCCCCC-EECCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCCCCEEE
T ss_conf 959989899975996-899985364233224777762-001455303378997008999789985998982258897799
Q ss_pred EEECCCC-----------CEEEEECCCCCCEEEEEECC-CCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 9752677-----------03677237776314878737-87589997058979999856895889997067767766740
Q T0558 78 MITRDGR-----------ELWNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQF 145 (294)
Q Consensus 78 ~~~~~~~-----------~~~~~~~~~~~~v~~~~~~~-dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 145 (294)
+|+.... ...+...++...+.+++|.| +++++++++.|+.+.+|+..+++.+.... .|...+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~la~~~~dg~v~~wd~~~~~~~~~~~------~~~~~v 195 (434)
T 2oit_A 122 FFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL------PSTVAV 195 (434)
T ss_dssp EEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE------CGGGCE
T ss_pred EEECCCCCCEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEC------CCCCCE
T ss_conf 99877675201114775117876137888555303488887438998379848999866771665504------888873
Q ss_pred CEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEE--------CCCEEEEEEEECCCCEEEECCCCCE
Q ss_conf 08999699899999746988999937885889851--------6973489887348968997358987
Q T0558 146 RQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVK--------LSGTPFSSAFLDNGDCLVACGDAHC 205 (294)
Q Consensus 146 ~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~~~~~--------~~~~~~~~~~~~~g~~~v~~~~~~~ 205 (294)
.+++|+|+|+.+++++.|++|++|+.++....... +...+.++.+++++.++++.+.++.
T Consensus 196 ~~~~~~~~g~~~~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~s~~~~~~ 263 (434)
T 2oit_A 196 TSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADG 263 (434)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTC
T ss_pred EEEEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCC
T ss_conf 69998278981887558987999918997644521787446788665589999999969999747877
No 95
>2bbk_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 1.75A {Paracoccus denitrificans} SCOP: b.69.2.1 PDB: 2gc4_A* 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 1mg2_A* 1mg3_A* 2mta_H*
Probab=99.50 E-value=8e-11 Score=94.45 Aligned_cols=150 Identities=8% Similarity=-0.021 Sum_probs=95.5
Q ss_pred CCCCCCCEEEEE-----CCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE------------CCEEEEEE
Q ss_conf 147888589997-----4798699998878829999944998731164790798399841------------88289975
Q T0558 18 QGSSPQHLLVGG-----SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY------------SKGAKMIT 80 (294)
Q Consensus 18 ~~s~~~~~l~~g-----s~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~------------~~~v~~~~ 80 (294)
+.+++.+.+++. ..++.|.+||.+|++++.+.+.+.. ..++|+|||++|+.. ++.+.+||
T Consensus 8 a~~pdg~~~yv~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~---~~~a~SpDg~~l~~~~~~~~~~~~~~~~~~v~v~D 84 (355)
T 2bbk_H 8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL---PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 84 (355)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS---CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EECCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCC---CCEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEE
T ss_conf 408999899998076577777199999999989999978998---85799389999999967766410147999899999
Q ss_pred CCCCCEEEEECCC-------CCCEEEEEECCCCCEEEEEE--CCCCEEEEECCCCCEEEEEECCCCCCC-CCCCCCEEEE
Q ss_conf 2677036772377-------76314878737875899970--589799998568958899970677677-6674008999
Q T0558 81 RDGRELWNIAAPA-------GCEMQTARILPDGNALVAWC--GHPSTILEVNMKGEVLSKTEFETGIER-PHAQFRQINK 150 (294)
Q Consensus 81 ~~~~~~~~~~~~~-------~~~v~~~~~~~dg~~l~~~s--~~~~~~~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~ 150 (294)
............. ......+.++|||+++++.. .+..+.+|+..++++............ .......+.+
T Consensus 85 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (355)
T 2bbk_H 85 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMH 164 (355)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE
T ss_pred CCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCEEEE
T ss_conf 99997986770788860343588733999569986898732558679998658983786644675256702899548999
Q ss_pred CCCCCEEEEEE-CCCEEEEEE
Q ss_conf 69989999974-698899993
Q T0558 151 NKKGNYLVPLF-ATSEVREIA 170 (294)
Q Consensus 151 s~dG~~i~~g~-~d~~i~~~d 170 (294)
++||++++... .++.+..++
T Consensus 165 s~Dg~~~~~~~~~~~~~~~~~ 185 (355)
T 2bbk_H 165 CRDGSLAKVAFGTEGTPEITH 185 (355)
T ss_dssp ETTSCEEEEECCSSSCCEEEE
T ss_pred ECCCCEEEEECCCCCEEEEEE
T ss_conf 289989999906882688997
No 96
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.50 E-value=5.3e-10 Score=88.43 Aligned_cols=146 Identities=9% Similarity=0.028 Sum_probs=100.7
Q ss_pred CCCCCCCCEEEEE------CCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE------------CCEEEE
Q ss_conf 0147888589997------4798699998878829999944998731164790798399841------------882899
Q T0558 17 AQGSSPQHLLVGG------SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY------------SKGAKM 78 (294)
Q Consensus 17 ~~~s~~~~~l~~g------s~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~------------~~~v~~ 78 (294)
+..|++++.+.+. ..|++|.+||..||+++++++.+ ....++|+|||+.++.. ++.+.+
T Consensus 9 ~~~~p~~~~~~v~d~~~~~~~dg~v~v~D~~tg~~~~~~~~g---~~~~~a~SpDG~~l~v~~~~~~~~~~~~~~~~v~v 85 (361)
T 2oiz_A 9 SVSAPQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA---FNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEV 85 (361)
T ss_dssp CCSSCGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC---EEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred EEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECC---CCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf 049999998999836545532896999989999499998589---98847996998999999566664301588998999
Q ss_pred EECCCCCEEEEECCC------CCCEEEEEECCCCCEEEEEECC--CCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE
Q ss_conf 752677036772377------7631487873787589997058--97999985689588999706776776674008999
Q T0558 79 ITRDGRELWNIAAPA------GCEMQTARILPDGNALVAWCGH--PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINK 150 (294)
Q Consensus 79 ~~~~~~~~~~~~~~~------~~~v~~~~~~~dg~~l~~~s~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 150 (294)
||............. ......+.++|||++++..+.. ..+.+++..+++.+.++.... ....+.+
T Consensus 86 ~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~ 158 (361)
T 2oiz_A 86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-------GCWSVIP 158 (361)
T ss_dssp EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-------TEEEEEE
T ss_pred EECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCEEEEEEECCC-------CCCEEEE
T ss_conf 999999798788068864323687422999899987864158998149986266738999850575-------5335998
Q ss_pred CCCCCE-EEEEECCCEEEEEECC
Q ss_conf 699899-9997469889999378
Q T0558 151 NKKGNY-LVPLFATSEVREIAPN 172 (294)
Q Consensus 151 s~dG~~-i~~g~~d~~i~~~d~~ 172 (294)
+++|.. +++.+.|+++.+|+..
T Consensus 159 ~~~g~~~~~~~~~d~~v~~~~~~ 181 (361)
T 2oiz_A 159 QPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp CTTSSSEEEEEETTSSEEEEEEC
T ss_pred CCCCCEEEEEECCCCEEEEEEEC
T ss_conf 36898588997589939999978
No 97
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.49 E-value=2.2e-10 Score=91.19 Aligned_cols=216 Identities=9% Similarity=0.009 Sum_probs=118.5
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEE-EEECCCCCCE
Q ss_conf 8885899974798699998878829999944998731164790798399841--882899752677036-7723777631
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELW-NIAAPAGCEM 97 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~-~~~~~~~~~v 97 (294)
.++++|++|+.|++|.+||..+++.+.++. .+.... ..+.+.+..++++ ++....++....... ..........
T Consensus 181 ~~~~~l~sgs~Dg~i~vwd~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (435)
T 1p22_A 181 YDERVIITGSSDSTVRVWDVNTGEMLNTLI-HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 257 (435)
T ss_dssp CCSSEEEEEETTSCEEEEESSSCCEEEEEC-CCCSCE--EEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS
T ss_pred ECCCEEEEEECCCCEEEECCCCCCCCCCCC-CCCCEE--EEEECCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCC
T ss_conf 779999999379847873057775321013-555325--66521421157750366530001343310001111257754
Q ss_pred EEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEE
Q ss_conf 487873787589997058979999856895889997067767766740089996998999997469889999378-8588
Q T0558 98 QTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 176 (294)
Q Consensus 98 ~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~ 176 (294)
.......+...+..+..+.....|...+++.......... ......+++.+++++..|+.+++||.. ++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~s~~~d~~i~l~d~~~~~~~ 329 (435)
T 1p22_A 258 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--------GIACLQYRDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp CEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSS--------CEEEEEEETTEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEECCCC--------CCCCCCCCCCEEEEECCCCCEEEEECCCCCEE
T ss_conf 0577751353124413786068742588732455302445--------42112477753675126652277431678354
Q ss_pred EEEECCC-EEEEEEEECCCCEEEECCCCCEEEEEECCCC---------EEEEEECCCCCCCEEECCCCCEEEC--CCCCE
Q ss_conf 9851697-3489887348968997358987999987898---------5999844887641141134534893--89989
Q T0558 177 NSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQLNLESN---------RIVRRVNANDIEGVQLFFVAQLFPL--QNGGL 244 (294)
Q Consensus 177 ~~~~~~~-~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~--~~G~i 244 (294)
.....+. .+.++ .++++++++++.|+.|++||..++ ..+..+.+|......+.+.+..... .||++
T Consensus 330 ~~~~~h~~~V~~v--~~~~~~l~sgs~Dg~I~vWdl~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~d~~~lvS~s~Dg~I 407 (435)
T 1p22_A 330 RVLEGHEELVRCI--RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTI 407 (435)
T ss_dssp EEECCCSSCEEEE--ECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEE
T ss_pred EEECCCCCCEEEE--EECCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCEE
T ss_conf 5532778866999--96699999997989499998878865556677545578468899889999709999999269969
Q ss_pred EEEEC
Q ss_conf 99804
Q T0558 245 YICNW 249 (294)
Q Consensus 245 ~i~~~ 249 (294)
.+|+.
T Consensus 408 ~vWD~ 412 (435)
T 1p22_A 408 LIWDF 412 (435)
T ss_dssp EEEC-
T ss_pred EEEEC
T ss_conf 99969
No 98
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoreductase; HET: PQQ; 1.50A {Methylophilus methylotrophus W3A1} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.49 E-value=5.6e-10 Score=88.29 Aligned_cols=197 Identities=14% Similarity=0.090 Sum_probs=113.3
Q ss_pred CCEEEEECC-CCEEEEEEC-CCCEEEEEEECCCCCCC----------CEEEEECCCCEEE-EECCEEEEEECC-CCCEEE
Q ss_conf 858999747-986999988-78829999944998731----------1647907983998-418828997526-770367
Q T0558 23 QHLLVGGSG-WNKIAIINK-DTKEIVWEYPLEKGWEC----------NSVAATKAGEILF-SYSKGAKMITRD-GRELWN 88 (294)
Q Consensus 23 ~~~l~~gs~-~~~i~~~d~-~tg~~~w~~~~~~~~~~----------~~~~~~pdG~~l~-s~~~~v~~~~~~-~~~~~~ 88 (294)
+..+..++. +++|+++|. +|||++|++........ ..+++. ++++++ +.++.++..|.. ++.+|+
T Consensus 62 ~g~vyv~t~~~~~v~A~da~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~-~~~v~~~~~dg~l~alda~tG~~~w~ 140 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-AGQIVKKQANGHLLALDAKTGKINWE 140 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCEECCCCCCCCCEEC-CCEEEEEECCCCEEEEEHHHHHHHCC
T ss_conf 99999933879959999589998568871488886544200247788862650-88699980797578110233333114
Q ss_pred EECCCCC---CEEEEEECCCCCEEEEEEC------CCCEEEEECCCCCEEEEEECCCCCCC-------------------
Q ss_conf 7237776---3148787378758999705------89799998568958899970677677-------------------
Q T0558 89 IAAPAGC---EMQTARILPDGNALVAWCG------HPSTILEVNMKGEVLSKTEFETGIER------------------- 140 (294)
Q Consensus 89 ~~~~~~~---~v~~~~~~~dg~~l~~~s~------~~~~~~~~~~~G~~~~~~~~~~~~~~------------------- 140 (294)
....... .+.+.....++ .++.++. .+.+..++..+|+++|++........
T Consensus 141 ~~~~~~~~~~~~t~~p~v~~~-~v~vg~~~~~~~~~G~v~a~D~~tG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g~~~~ 219 (571)
T 2ad6_A 141 VEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGL 219 (571)
T ss_dssp EECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSH
T ss_pred CCCCCCCCCCEEEECCCCCCC-EEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 455665566304416734698-5888400134466774899978898578896047863345566554544445564344
Q ss_pred -------------CCCCCCEEEECCCCCEEEEEEC----------------CCEEEEEEC-CCCEEEEEECC--------
Q ss_conf -------------6674008999699899999746----------------988999937-88588985169--------
Q T0558 141 -------------PHAQFRQINKNKKGNYLVPLFA----------------TSEVREIAP-NGQLLNSVKLS-------- 182 (294)
Q Consensus 141 -------------~~~~~~~~~~s~dG~~i~~g~~----------------d~~i~~~d~-~g~~~~~~~~~-------- 182 (294)
.........+.++.++++.+.. ...+..+|. +|+.+|.++..
T Consensus 220 ~~~~~~~~~~~~~~g~~W~~~s~D~~~~l~y~~tg~~~p~~~~~r~g~n~~s~svvAlD~~TG~~~W~~q~~~~D~wd~d 299 (571)
T 2ad6_A 220 GTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFA 299 (571)
T ss_dssp HHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCC
T ss_conf 66567776313278741146213542085555313456652134564224665335542255111101235774332455
Q ss_pred --CEEEEEEEECCCC---EEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf --7348988734896---89973589879999878985999844
Q T0558 183 --GTPFSSAFLDNGD---CLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 183 --~~~~~~~~~~~g~---~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
..+.......+|+ .++..+.++.++++|.++|+.++...
T Consensus 300 ~~~~~~l~~~~~~G~~~~~v~~~~k~G~l~~lDr~tG~~i~~~~ 343 (571)
T 2ad6_A 300 GVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp CCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCEEEEEC
T ss_conf 66451367652057665413641666549998468984765543
No 99
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=2.4e-10 Score=90.93 Aligned_cols=234 Identities=11% Similarity=-0.000 Sum_probs=137.2
Q ss_pred CCCCCCCCEEEEE-----CCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE------------CCEEEEE
Q ss_conf 0147888589997-----4798699998878829999944998731164790798399841------------8828997
Q T0558 17 AQGSSPQHLLVGG-----SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY------------SKGAKMI 79 (294)
Q Consensus 17 ~~~s~~~~~l~~g-----s~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~------------~~~v~~~ 79 (294)
...+++.+.++.. +.+..+.+||..+++++.+.+.+. . ..++|+|||+.++.. ++.+++|
T Consensus 78 ~~~~~d~~~~~v~~~~~~~~~~~v~v~D~~~~~~~~~~~~g~--~-~~~a~spdG~~l~va~~~~~~~~~g~~~~~v~v~ 154 (426)
T 3c75_H 78 EAPAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF--L-PHPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS--S-CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EECCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCC--C-CCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEE
T ss_conf 212899976899737778765439999899997998954898--8-8558889998799984045654236788869999
Q ss_pred ECCCCCEEEEEC-C------CCCCEEEEEECCCCCEEEEEEC--CCCEEEEECCCCCEEEEEECCCCCCC-CCCCCCEEE
Q ss_conf 526770367723-7------7763148787378758999705--89799998568958899970677677-667400899
Q T0558 80 TRDGRELWNIAA-P------AGCEMQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFETGIER-PHAQFRQIN 149 (294)
Q Consensus 80 ~~~~~~~~~~~~-~------~~~~v~~~~~~~dg~~l~~~s~--~~~~~~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~~ 149 (294)
|....+...... . .......++++|||+++++.+. +..+.+|+..+++..+.......... +......+.
T Consensus 155 D~~t~~~~~~i~~~~~~~~~~~~~~~~va~spdG~~l~v~~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (426)
T 3c75_H 155 DPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYM 234 (426)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEE
T ss_pred ECCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCEECCCCCCEEEE
T ss_conf 89999888898368775321257865469824887378732589977999968876076541367731374699945999
Q ss_pred ECCCCCEEEE-------------------------------------EECCCEEEEEECCCCEEEEE-----ECC-----
Q ss_conf 9699899999-------------------------------------74698899993788588985-----169-----
Q T0558 150 KNKKGNYLVP-------------------------------------LFATSEVREIAPNGQLLNSV-----KLS----- 182 (294)
Q Consensus 150 ~s~dG~~i~~-------------------------------------g~~d~~i~~~d~~g~~~~~~-----~~~----- 182 (294)
+++||++++. ...++.+++++..+...... ...
T Consensus 235 ~s~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~v~~~~~~~~~~~~~~~~ 314 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERAD 314 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGG
T ss_pred EECCCCEEEEECCCCCEEEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEEC
T ss_conf 92699899999479967989600011156640100337379964999768985999974898279984014651546813
Q ss_pred ----CEEEEEEEECCCCEEEECCC----------CCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCC--EEE
Q ss_conf ----73489887348968997358----------98799998789859998448876411411345348938998--999
Q T0558 183 ----GTPFSSAFLDNGDCLVACGD----------AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG--LYI 246 (294)
Q Consensus 183 ----~~~~~~~~~~~g~~~v~~~~----------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~--i~i 246 (294)
..+..+.++++|+.+++.+. ++.+.+||.++++++.++... ..+.++.+.+||+ +++
T Consensus 315 ~~~p~g~~~va~spdg~~l~v~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~i~~g-------~~~~~la~spDG~~~l~v 387 (426)
T 3c75_H 315 DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-------HEIDSINVSQDAEPLLYA 387 (426)
T ss_dssp TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-------EEECEEEECCSSSCEEEE
T ss_pred CCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCC-------CCEEEEEECCCCCEEEEE
T ss_conf 4358870678984799979999558874200589987999999999799895489-------955589998899969999
Q ss_pred EECCCCEEECCCCC
Q ss_conf 80467714302477
Q T0558 247 CNWQGHDREAGKGK 260 (294)
Q Consensus 247 ~~~~~~~~~~~~~~ 260 (294)
.+.....+..+...
T Consensus 388 ~~~~d~~V~V~D~~ 401 (426)
T 3c75_H 388 LSAGTQTLHIYDAA 401 (426)
T ss_dssp EETTTTEEEEEETT
T ss_pred EECCCCEEEEEECC
T ss_conf 96899959999999
No 100
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.47 E-value=1.1e-10 Score=93.48 Aligned_cols=206 Identities=11% Similarity=0.064 Sum_probs=122.0
Q ss_pred CCCCCCCCEEEE----------ECCCCEEEEEECCCCEEEEEEECCCC------CCCCEEEEECCCCEEEEE----CCEE
Q ss_conf 014788858999----------74798699998878829999944998------731164790798399841----8828
Q T0558 17 AQGSSPQHLLVG----------GSGWNKIAIINKDTKEIVWEYPLEKG------WECNSVAATKAGEILFSY----SKGA 76 (294)
Q Consensus 17 ~~~s~~~~~l~~----------gs~~~~i~~~d~~tg~~~w~~~~~~~------~~~~~~~~~pdG~~l~s~----~~~v 76 (294)
...|++.+.+++ |+.++.|.+||..+++.+.+..+... .....++++|||++++.. +..+
T Consensus 123 ~a~spdG~~l~va~~~~~~~~~g~~~~~v~v~D~~t~~~~~~i~~~~~~~~~~~~~~~~va~spdG~~l~v~~~~~~~~v 202 (426)
T 3c75_H 123 PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAV 202 (426)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCEE
T ss_conf 58889998799984045654236788869999899998888983687753212578654698248873787325899779
Q ss_pred EEEECCCCCEEEEECCCCC-------CEEEEEECCCCCEEEEEECCCC--------------------------------
Q ss_conf 9975267703677237776-------3148787378758999705897--------------------------------
Q T0558 77 KMITRDGRELWNIAAPAGC-------EMQTARILPDGNALVAWCGHPS-------------------------------- 117 (294)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~-------~v~~~~~~~dg~~l~~~s~~~~-------------------------------- 117 (294)
.+|+.....+......... ....+.+++||.+++....+..
T Consensus 203 ~v~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (426)
T 3c75_H 203 GVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP 282 (426)
T ss_dssp EEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE
T ss_pred EEEECCCCEEEEEECCCCCCEECCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCEEEEEEECCCCEEEEE
T ss_conf 99968876076541367731374699945999926998999994799679896000111566401003373799649997
Q ss_pred -----EEEEECCCCCEEEE--EECCCC----CCCCCCCCCEEEECCCCCEEEEEECC----------CEEEEEEC-CCCE
Q ss_conf -----99998568958899--970677----67766740089996998999997469----------88999937-8858
Q T0558 118 -----TILEVNMKGEVLSK--TEFETG----IERPHAQFRQINKNKKGNYLVPLFAT----------SEVREIAP-NGQL 175 (294)
Q Consensus 118 -----~~~~~~~~G~~~~~--~~~~~~----~~~~~~~~~~~~~s~dG~~i~~g~~d----------~~i~~~d~-~g~~ 175 (294)
+++++...++.... ...... ....+.....++++|||+.+++...+ +.|.+||. +++.
T Consensus 283 ~~~~~v~v~~~~~~~v~~~~~~~~~~~~~~~~~~~p~g~~~va~spdg~~l~v~~~~~~~~~~~~~~~~v~v~D~~tg~~ 362 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER 362 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCEEEEEEECCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCE
T ss_conf 68985999974898279984014651546813435887067898479997999955887420058998799999999979
Q ss_pred EEEEECCCEEEEEEEECCCCE--EEECCCCCEEEEEECCCCEEEEEECC
Q ss_conf 898516973489887348968--99735898799998789859998448
Q T0558 176 LNSVKLSGTPFSSAFLDNGDC--LVACGDAHCFVQLNLESNRIVRRVNA 222 (294)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~i~~~d~~~g~~~~~~~~ 222 (294)
+.....+..+.++.+++||+. +++++.++.+.+||.++++++.++.+
T Consensus 363 ~~~i~~g~~~~~la~spDG~~~l~v~~~~d~~V~V~D~~tg~~v~~l~~ 411 (426)
T 3c75_H 363 INKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQ 411 (426)
T ss_dssp EEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECC
T ss_conf 9895489955589998899969999968999599999999979999778
No 101
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.47 E-value=6.7e-10 Score=87.68 Aligned_cols=213 Identities=11% Similarity=0.021 Sum_probs=133.7
Q ss_pred CCCCCCCEEEEECCCC---EEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEE-EECCEEEEEECCCCCEEEEEC--
Q ss_conf 1478885899974798---6999988788299999449987311647907983998-418828997526770367723--
Q T0558 18 QGSSPQHLLVGGSGWN---KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAA-- 91 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~---~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~-s~~~~v~~~~~~~~~~~~~~~-- 91 (294)
+.++....|++++++. .|.+||.++++...-.+ +...+.++.++|||+.|+ ..++.++.++.......+...
T Consensus 4 ~~~~~~~~l~~~~~~~~~~~i~~~D~~t~~~~~i~~--~~~~~~~p~wSPDG~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T 2ojh_A 4 RQSTLHTRLSTGPGGSMRSSIEIFNIRTRKMRVVWQ--TPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTG 81 (297)
T ss_dssp --------------CCCCEEEEEEETTTTEEEEEEE--ESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCT
T ss_pred CCCCCCCEEEECCCCCCEEEEEEEECCCCCEEEEEC--CCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECC
T ss_conf 346665669776899856189999899999899988--999787179977998999998997899981799714887416
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCC----CEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEE-EEECCCE-
Q ss_conf 7776314878737875899970589----799998568958899970677677667400899969989999-9746988-
Q T0558 92 PAGCEMQTARILPDGNALVAWCGHP----STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLV-PLFATSE- 165 (294)
Q Consensus 92 ~~~~~v~~~~~~~dg~~l~~~s~~~----~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~-~g~~d~~- 165 (294)
.........+|+|||+.++...... .+...+...++... ...........++|||+.|+ ++..++.
T Consensus 82 ~~~~~~~~~~~spDg~~l~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~SpDg~~i~f~~~~d~~~ 153 (297)
T 2ojh_A 82 FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRL--------MTKNLPSYWHGWSPDGKSFTYCGIRDQVF 153 (297)
T ss_dssp TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEE--------CCSSSSEEEEEECTTSSEEEEEEEETTEE
T ss_pred CCCCEECCEEECCCCCEEECCCCCCCCCEEEEEEEECCCCEEE--------ECCCCCCEEEEECCCCCEEEEEEECCCCC
T ss_conf 8873216505988996002110179997699997302453034--------01137750354889998689977606871
Q ss_pred -EEEEECCCC-EEEEEECCCEEEEEEEECCCCEEEECCC---CCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECC
Q ss_conf -999937885-8898516973489887348968997358---98799998789859998448876411411345348938
Q T0558 166 -VREIAPNGQ-LLNSVKLSGTPFSSAFLDNGDCLVACGD---AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ 240 (294)
Q Consensus 166 -i~~~d~~g~-~~~~~~~~~~~~~~~~~~~g~~~v~~~~---~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (294)
|+++|..+. ...............++++|..++..+. ...++.++.+++++..-... ... .....+.+
T Consensus 154 ~i~~~d~~t~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~g~~~i~~~~~~~~~~~~lt~~-~~~------~~~~~~s~ 226 (297)
T 2ojh_A 154 DIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS-AYG------DWFPHPSP 226 (297)
T ss_dssp EEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC-SEE------EEEEEECT
T ss_pred EEECCCCCCCCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEECC-CCC------CEEEEECC
T ss_conf 14411434272567753167410003878999868986689953556860653615995113-476------20000879
Q ss_pred CCCEEEE
Q ss_conf 9989998
Q T0558 241 NGGLYIC 247 (294)
Q Consensus 241 ~G~i~i~ 247 (294)
+|+.++.
T Consensus 227 dg~~i~f 233 (297)
T 2ojh_A 227 SGDKVVF 233 (297)
T ss_dssp TSSEEEE
T ss_pred CCCEEEE
T ss_conf 9999999
No 102
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.46 E-value=1.4e-09 Score=85.44 Aligned_cols=219 Identities=13% Similarity=0.179 Sum_probs=139.0
Q ss_pred CCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCC-----CCCCCEEEEECCC-CEEEEEC---CEEEEEECCCCCEEEE
Q ss_conf 47888589997479869999887882999994499-----8731164790798-3998418---8289975267703677
Q T0558 19 GSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-----GWECNSVAATKAG-EILFSYS---KGAKMITRDGRELWNI 89 (294)
Q Consensus 19 ~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~-----~~~~~~~~~~pdG-~~l~s~~---~~v~~~~~~~~~~~~~ 89 (294)
-.++++++++.+.+++|.++|. .|++++++.... -..+..+++.++. .++++.+ ..+..++.+++.....
T Consensus 37 vd~~g~iyVaD~~n~rI~v~d~-~G~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~~~v~~~~~~~~i~~~~~~g~~~~~~ 115 (286)
T 1q7f_A 37 VNAQNDIIVADTNNHRIQIFDK-EGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKF 115 (286)
T ss_dssp ECTTCCEEEEEGGGTEEEEECT-TSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEEC-CCCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCCEEEEC
T ss_conf 9899999999899999999959-999899806635886630289628998259849997367505799984167324404
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 23777631487873787589997058979999856895889997067767766740089996998999997469889999
Q T0558 90 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 169 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~ 169 (294)
..........+++.++|+++++.... ..+.....+|+.++.+..... ......+.++++|+++++...++.|+++
T Consensus 116 ~~~~~~~p~~~avd~~g~i~v~~~~~-~~i~~~~~dg~~~~~~~~~~~----~~~~~~i~vd~~g~iyv~d~~~~~V~v~ 190 (286)
T 1q7f_A 116 GATILQHPRGVTVDNKGRIIVVECKV-MRVIIFDQNGNVLHKFGCSKH----LEFPNGVVVNDKQEIFISDNRAHCVKVF 190 (286)
T ss_dssp CTTTCSCEEEEEECTTSCEEEEETTT-TEEEEECTTSCEEEEEECTTT----CSSEEEEEECSSSEEEEEEGGGTEEEEE
T ss_pred CCCCCCCCCEEEEECCCCEEEECCCC-EEEEEECCCCCEEEECCCCCC----CCCCCEEEEEECCCEEEEECCCCEEEEE
T ss_conf 88865673279994688899983674-079987799973456165310----1210159996048799972574189999
Q ss_pred ECCCCEEEEEECC---CEEEEEEEECCCCEEEECCCCC-EEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEE
Q ss_conf 3788588985169---7348988734896899735898-79999878985999844887641141134534893899899
Q T0558 170 APNGQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAH-CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY 245 (294)
Q Consensus 170 d~~g~~~~~~~~~---~~~~~~~~~~~g~~~v~~~~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~ 245 (294)
|.+|+.+.++... ..|.++++.++|+++++...++ +|.+++. +|+++..+...... ..+.++.+.++|+++
T Consensus 191 d~~G~~~~~~~~~g~~~~P~giavD~~G~i~V~d~~~~~~v~~f~~-~G~~~~~~~~~~~~----~~p~~iav~~dG~l~ 265 (286)
T 1q7f_A 191 NYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKH----AQCFDVALMDDGSVV 265 (286)
T ss_dssp ETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCC----SCEEEEEEETTTEEE
T ss_pred ECCCCEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECC-CCCEEEEEECCCCC----CCEEEEEECCCCCEE
T ss_conf 3899879898888720575255566889899997899949999999-99999999388988----988589990899399
Q ss_pred EEE
Q ss_conf 980
Q T0558 246 ICN 248 (294)
Q Consensus 246 i~~ 248 (294)
+..
T Consensus 266 v~~ 268 (286)
T 1q7f_A 266 LAS 268 (286)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 990
No 103
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.46 E-value=5e-09 Score=81.30 Aligned_cols=230 Identities=12% Similarity=0.047 Sum_probs=140.9
Q ss_pred HHCCCCCCCCEEEEEC----------CCCEEEEEECCCCEEEEEEECCCC------CCCCEEEEECCCCEEEEE----CC
Q ss_conf 2001478885899974----------798699998878829999944998------731164790798399841----88
Q T0558 15 PFAQGSSPQHLLVGGS----------GWNKIAIINKDTKEIVWEYPLEKG------WECNSVAATKAGEILFSY----SK 74 (294)
Q Consensus 15 ~~~~~s~~~~~l~~gs----------~~~~i~~~d~~tg~~~w~~~~~~~------~~~~~~~~~pdG~~l~s~----~~ 74 (294)
+-...|++++.|++.+ .++.|.+||.+|++.+.+..+... .....++|+|||+.++.. +.
T Consensus 69 ~~va~SpDG~~l~va~~~~~~~~~g~r~~~V~v~D~~t~~~~~~i~~~~~~~~~~~~~p~~~a~spDg~~l~v~~~~~~~ 148 (373)
T 2mad_H 69 PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCC
T ss_conf 84699999998999955555665577789899999999989899978888741137886207991199847986069994
Q ss_pred EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCC
Q ss_conf 28997526770367723777631487873787589-99705897999985689588999706776776674008999699
Q T0558 75 GAKMITRDGRELWNIAAPAGCEMQTARILPDGNAL-VAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 153 (294)
Q Consensus 75 ~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l-~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~d 153 (294)
.+.+|+............ .....++++++.+ ++.+.++.+..++...+........................+++
T Consensus 149 ~v~v~d~~~~~~~~~~~~----~~~~~~~~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (373)
T 2mad_H 149 AVGLVVQGGSSDDQLLSS----PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred EEEEEECCCCEEEEEECC----CCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEECCC
T ss_conf 589885678649878437----8717993189928999878996999856897588776145556542554443046699
Q ss_pred CCEEEEEECCCEEEEEECCCCEEE-----EE---------ECCCEEEEEEEECCCCEEEEC----------CCCCEEEEE
Q ss_conf 899999746988999937885889-----85---------169734898873489689973----------589879999
Q T0558 154 GNYLVPLFATSEVREIAPNGQLLN-----SV---------KLSGTPFSSAFLDNGDCLVAC----------GDAHCFVQL 209 (294)
Q Consensus 154 G~~i~~g~~d~~i~~~d~~g~~~~-----~~---------~~~~~~~~~~~~~~g~~~v~~----------~~~~~i~~~ 209 (294)
+.++.+ ..++.++.++..+.... .. ..........+.++++.++.. ...+.+.++
T Consensus 225 ~~~~~~-~~~g~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~v~v~ 303 (373)
T 2mad_H 225 GRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CEEEEE-CCCCCEEEEECCCCEEEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCEEEEE
T ss_conf 739998-6998399998579907898778467574772210268517999816997378885168711541799869999
Q ss_pred ECCCCEEEEEECCCCCCCEEECCCCCEEECCCCC--EEEEECCCCEEEC
Q ss_conf 8789859998448876411411345348938998--9998046771430
Q T0558 210 NLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG--LYICNWQGHDREA 256 (294)
Q Consensus 210 d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~--i~i~~~~~~~~~~ 256 (294)
|..+++.+.++.... .+.++.+.+||+ +++.+.....+..
T Consensus 304 D~~t~~~~~~i~~g~-------~~~~v~~SpDG~~~l~v~~~~~~~v~v 345 (373)
T 2mad_H 304 TGLVGQTSSQISLGH-------DVDAISVAQDGGPDLYALSAGTEVLHI 345 (373)
T ss_pred ECCCCCEEEEECCCC-------CEEEEEECCCCCEEEEEEECCCCEEEE
T ss_conf 999996988964899-------710799988999699999589997999
No 104
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., structural genomics, PSI-2; 2.00A {Methanococcus maripaludis C7}
Probab=99.46 E-value=5e-10 Score=88.64 Aligned_cols=205 Identities=15% Similarity=0.091 Sum_probs=120.3
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE-CCEEEEEECCCCCEEEEECCCCCCEEEEE
Q ss_conf 85899974798699998878829999944998731164790798399841-88289975267703677237776314878
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY-SKGAKMITRDGRELWNIAAPAGCEMQTAR 101 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~ 101 (294)
+..++.++.++.|+++|. +|+++|+++...... ......+++.+++.. ++.++.++..++++|....+.... ....
T Consensus 107 ~~~v~v~~~dg~l~~~d~-~G~~~W~~~~~~~~~-~~p~~~~~~~i~~~~~~~~v~~~~~~g~~~~~~~~~~~~~-~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINT-DGTEKWRFKTKKAIY-ATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAIT-SAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECT-TSCEEEEEECSSCCC-SCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCC-SCCE
T ss_pred CCEEEEECCCCCEEEECC-CCCEEEEECCCCCCC-CCCCCCCCCEEEECCCCCCEEEECCCCCEEEEEECCCCEE-ECEE
T ss_conf 999999879998898847-996677632357410-3653111321451137882578989997898871345201-0000
Q ss_pred ECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEC
Q ss_conf 73787589997058979999856895889997067767766740089996998999997469889999378858898516
Q T0558 102 ILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKL 181 (294)
Q Consensus 102 ~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~~~~~~ 181 (294)
...++. ++.++ ..+..+... +...+.+....... ......++ ..++.+..++.++.+|.++...|+...
T Consensus 184 ~~~~~~-v~~~~--~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~-~~~~v~~~~g~v~~~d~~g~~~W~~~~ 252 (330)
T 3hxj_A 184 IGKDGT-IYFGS--DKVYAINPD-GTEKWNFYAGYWTV------TRPAISED-GTIYVTSLDGHLYAINPDGTEKWRFKT 252 (330)
T ss_dssp ECTTCC-EEEES--SSEEEECTT-SCEEEEECCSSCCC------SCCEECTT-SCEEEEETTTEEEEECTTSCEEEEEEC
T ss_pred ECCCCE-EEEEC--CEEEEEECC-CCEEEEEECCCCEE------EEEEEECC-CCEEECCCCCEEEEEECCCCEEEEEEE
T ss_conf 226977-99962--325887047-73024684488405------54211002-513661799689999835720589975
Q ss_pred CCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEE
Q ss_conf 9734898873489689973589879999878985999844887641141134534893899899980
Q T0558 182 SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 248 (294)
Q Consensus 182 ~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~ 248 (294)
...+.+.++..+++.++.++.++.++++|. +|+++|++...... ........+|++++..
T Consensus 253 ~~~~~~~~~~~~~~~v~~~~~~G~l~~~d~-~G~~~w~~~~~~~~------~~~p~v~~dg~l~v~~ 312 (330)
T 3hxj_A 253 GKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFETGSWI------IATPVIDENGTIYFGT 312 (330)
T ss_dssp SSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEECSSCC------CSCCEECTTCCEEEEC
T ss_pred CCCCCCCCEEECCCEEEEECCCCEEEEEEC-CCCEEEEEECCCCC------EEEEEEECCCEEEEEE
T ss_conf 167310047958999999968999999979-99999999899974------8832893399999997
No 105
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.46 E-value=1.2e-11 Score=100.52 Aligned_cols=151 Identities=7% Similarity=-0.089 Sum_probs=111.6
Q ss_pred HCCCCCCCCEEEEE----CCCCEEEEEECCCCEE----------EEEEECCCCCCCCEEEEEC-CCCEEEEE--CCEEEE
Q ss_conf 00147888589997----4798699998878829----------9999449987311647907-98399841--882899
Q T0558 16 FAQGSSPQHLLVGG----SGWNKIAIINKDTKEI----------VWEYPLEKGWECNSVAATK-AGEILFSY--SKGAKM 78 (294)
Q Consensus 16 ~~~~s~~~~~l~~g----s~~~~i~~~d~~tg~~----------~w~~~~~~~~~~~~~~~~p-dG~~l~s~--~~~v~~ 78 (294)
.++.|+++++|+++ +.++.|.+||..++.. .-....++...+.++++.| ++.+|++. |+.+++
T Consensus 97 ~v~fs~dg~~La~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~la~~~~dg~v~~ 176 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV 176 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCEEE
T ss_conf 89997899859989822588977999987767520111477511787613788855530348888743899837984899
Q ss_pred EECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECC-CCCCCCCCCCCEEEECCCCCEE
Q ss_conf 752677036772377763148787378758999705897999985689588999706-7767766740089996998999
Q T0558 79 ITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFE-TGIERPHAQFRQINKNKKGNYL 157 (294)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~s~dG~~i 157 (294)
|+...........+|...+.+++|+|+|+.+++++.|+++.+|+.. ++........ .....+...+.++.+++++.++
T Consensus 177 wd~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~dg~i~~w~~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EECCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEECCC-CCEEEEECCCCCCCCCCCCCEEEEEECCCCCEE
T ss_conf 9866771665504888873699982789818875589879999189-976445217874467886655899999999699
Q ss_pred EEEECCCEEE
Q ss_conf 9974698899
Q T0558 158 VPLFATSEVR 167 (294)
Q Consensus 158 ~~g~~d~~i~ 167 (294)
++++.++...
T Consensus 256 ~s~~~~~~~~ 265 (434)
T 2oit_A 256 IVYAAADGTL 265 (434)
T ss_dssp EEEEETTCCS
T ss_pred EEECCCCCCC
T ss_conf 9974787742
No 106
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.45 E-value=5.5e-09 Score=81.03 Aligned_cols=202 Identities=16% Similarity=0.217 Sum_probs=143.5
Q ss_pred CCCCEEEEEEECCC-C------CCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECC-----CCCCEEEEEECCC
Q ss_conf 87882999994499-8------731164790798399841--88289975267703677237-----7763148787378
Q T0558 40 KDTKEIVWEYPLEK-G------WECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAP-----AGCEMQTARILPD 105 (294)
Q Consensus 40 ~~tg~~~w~~~~~~-~------~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~d 105 (294)
..+.+++|..+.+. + ..+..++++|||++++++ ...+++++.++..++++... .......+.+.++
T Consensus 8 ~~~~~~~~~~~~g~~G~~~G~f~~P~gvavd~~g~iyVaD~~n~rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~i~~~~~ 87 (286)
T 1q7f_A 8 IKRQRMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRN 87 (286)
T ss_dssp CCCEEECEEEEECCBSSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETT
T ss_pred HCCCCEEEEEECCCCCCCCCEECCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEC
T ss_conf 12442489754389869998588900799989999999989999999995999989980663588663028962899825
Q ss_pred CC-EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECC--
Q ss_conf 75-899970589799998568958899970677677667400899969989999974698899993788588985169--
Q T0558 106 GN-ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLS-- 182 (294)
Q Consensus 106 g~-~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~~~~~~~-- 182 (294)
.. ++++.......+.....+|+....+.... ......+++.++|+++++....+.+.+++.+++.++++...
T Consensus 88 ~g~~~v~~~~~~~~i~~~~~~g~~~~~~~~~~-----~~~p~~~avd~~g~i~v~~~~~~~i~~~~~dg~~~~~~~~~~~ 162 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYNQYGQFVRKFGATI-----LQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKH 162 (286)
T ss_dssp TTEEEEEECGGGCEEEEECTTSCEEEEECTTT-----CSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTT
T ss_pred CCCEEEECCCCEEEEEEEECCCCEEEECCCCC-----CCCCCEEEEECCCCEEEECCCCEEEEEECCCCCEEEECCCCCC
T ss_conf 98499973675057999841673244048886-----5673279994688899983674079987799973456165310
Q ss_pred -CEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCC
Q ss_conf -734898873489689973589879999878985999844887641141134534893899899980467
Q T0558 183 -GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 251 (294)
Q Consensus 183 -~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~ 251 (294)
..+..+.+.++|+.+++...++.|.++|.. |+.+.++.... ....+.++...++|++++.++..
T Consensus 163 ~~~~~~i~vd~~g~iyv~d~~~~~V~v~d~~-G~~~~~~~~~g----~~~~P~giavD~~G~i~V~d~~~ 227 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEG----ITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTT----TSCSEEEEEECTTCCEEEEECSS
T ss_pred CCCCCEEEEEECCCEEEEECCCCEEEEEECC-CCEEEEECCCC----CCCCCCEEEECCCCCEEEEECCC
T ss_conf 1210159996048799972574189999389-98798988887----20575255566889899997899
No 107
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.45 E-value=3e-09 Score=82.91 Aligned_cols=79 Identities=11% Similarity=0.044 Sum_probs=41.8
Q ss_pred CCEEEECCCCCEEEEEECCC--EEEEEECCCCEEE-EEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 00899969989999974698--8999937885889-85169734898873489689973589879999878985999844
Q T0558 145 FRQINKNKKGNYLVPLFATS--EVREIAPNGQLLN-SVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 145 ~~~~~~s~dG~~i~~g~~d~--~i~~~d~~g~~~~-~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
+..+.++|||+.++..+.++ .+.+|+..+.... .......+.+..++|||+.++..+.++.++++|.++|+......
T Consensus 338 ~~~~~~spDg~~l~~~~~~~g~~~~~~~~~~g~~~~l~~~~~~v~~~~~SPDG~~la~~~~~~~l~~~d~~tg~~~~l~~ 417 (1045)
T 1k32_A 338 IRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp EEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCEECCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEC
T ss_conf 23302136741999971788328999968999535610467852465888999999999799859999889991789742
Q ss_pred CC
Q ss_conf 88
Q T0558 222 AN 223 (294)
Q Consensus 222 ~~ 223 (294)
.+
T Consensus 418 ~~ 419 (1045)
T 1k32_A 418 SR 419 (1045)
T ss_dssp CS
T ss_pred CC
T ss_conf 79
No 108
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.44 E-value=6.1e-09 Score=80.70 Aligned_cols=199 Identities=10% Similarity=0.012 Sum_probs=105.1
Q ss_pred CCEEEEECCCCEEEEEEC-CCCEEEEEEECCCCCCC----------CEEEEECC----CC-EEE-EECCEEEEEEC-CCC
Q ss_conf 858999747986999988-78829999944998731----------16479079----83-998-41882899752-677
Q T0558 23 QHLLVGGSGWNKIAIINK-DTKEIVWEYPLEKGWEC----------NSVAATKA----GE-ILF-SYSKGAKMITR-DGR 84 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~-~tg~~~w~~~~~~~~~~----------~~~~~~pd----G~-~l~-s~~~~v~~~~~-~~~ 84 (294)
+.+++..+.+++++++|. +|||++|++........ +.+++-++ .. +++ +.++.++.+|. +|+
T Consensus 63 g~lyv~t~~~~~v~Alda~~TG~~lW~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEECCCCCC
T ss_conf 99999407899589994799986788624878865442102465664069832799887499998079876864265673
Q ss_pred CEEEEECCCCCC--EEEEEECCCCCEEEEEEC------CCCEEEEECCCCCEEEEEECCCCCC-----------------
Q ss_conf 036772377763--148787378758999705------8979999856895889997067767-----------------
Q T0558 85 ELWNIAAPAGCE--MQTARILPDGNALVAWCG------HPSTILEVNMKGEVLSKTEFETGIE----------------- 139 (294)
Q Consensus 85 ~~~~~~~~~~~~--v~~~~~~~dg~~l~~~s~------~~~~~~~~~~~G~~~~~~~~~~~~~----------------- 139 (294)
.+|++....... ....++..-++.++++.. .+.+..++..+|+++|++.......
T Consensus 143 ~~W~~~~~d~~~~~~~t~~P~i~~~~vivG~~~~e~~~~G~v~A~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~ 222 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQ 222 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EECCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 10232123555564223588077677899630354322573399876888288887535887665555444545655565
Q ss_pred ---------------CCCCCCCEEEECCCCCEEEEEECC----------------CEEEEEEC-CCCEEEEEECC-----
Q ss_conf ---------------766740089996998999997469----------------88999937-88588985169-----
Q T0558 140 ---------------RPHAQFRQINKNKKGNYLVPLFAT----------------SEVREIAP-NGQLLNSVKLS----- 182 (294)
Q Consensus 140 ---------------~~~~~~~~~~~s~dG~~i~~g~~d----------------~~i~~~d~-~g~~~~~~~~~----- 182 (294)
............++.++++.+..+ ..+..+|. +|+.+|.++..
T Consensus 223 ~~~~~~t~~~~~~~~~g~~~w~~~s~D~~~~~vy~~tg~~~~~~~~~r~gdn~~s~sivAlD~~TG~~~W~~q~~~~D~w 302 (599)
T 1w6s_A 223 KGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEW 302 (599)
T ss_dssp TTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSS
T ss_pred CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCC
T ss_conf 55566766677213378743356111567884564133457753100046443435412124355200343111246654
Q ss_pred --CE---EEEEE-EECCCC---EEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf --73---48988-734896---89973589879999878985999844
Q T0558 183 --GT---PFSSA-FLDNGD---CLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 183 --~~---~~~~~-~~~~g~---~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
+. +.-.. ...+|. .++.....+.++++|.++|++++...
T Consensus 303 d~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~yvlDr~tG~li~~~~ 350 (599)
T 1w6s_A 303 DYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEC
T ss_conf 456743116642013344564047742775217995157883444101
No 109
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.43 E-value=2.3e-09 Score=83.75 Aligned_cols=255 Identities=10% Similarity=0.006 Sum_probs=161.5
Q ss_pred HHCCCCCCCCEEEEECC----------CCEEEEEECCCCEEEEEEECCCC-----CCCCEEEEECCCCEEEEE----CCE
Q ss_conf 20014788858999747----------98699998878829999944998-----731164790798399841----882
Q T0558 15 PFAQGSSPQHLLVGGSG----------WNKIAIINKDTKEIVWEYPLEKG-----WECNSVAATKAGEILFSY----SKG 75 (294)
Q Consensus 15 ~~~~~s~~~~~l~~gs~----------~~~i~~~d~~tg~~~w~~~~~~~-----~~~~~~~~~pdG~~l~s~----~~~ 75 (294)
+-.+.|++++.|++.+. ++.|.+||..+++++.+.+.... ..+..++++|||+.++.. +..
T Consensus 53 ~~~a~SpDG~~l~v~~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~ 132 (361)
T 2oiz_A 53 GHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATS 132 (361)
T ss_dssp EEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEE
T ss_pred CCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCE
T ss_conf 84799699899999956666430158899899999999979878806886432368742299989998786415899814
Q ss_pred EEEEECCCCCEEEEECCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCC
Q ss_conf 8997526770367723777631487873787589-997058979999856895889997067767766740089996998
Q T0558 76 AKMITRDGRELWNIAAPAGCEMQTARILPDGNAL-VAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKG 154 (294)
Q Consensus 76 v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l-~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG 154 (294)
+..++.....+.+..... .....+.+.|++..+ ++.+.++.+.+|+.............................++|
T Consensus 133 v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (361)
T 2oiz_A 133 IGIVDVAKGDYVEDVTAA-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK 211 (361)
T ss_dssp EEEEETTTTEEEEEEGGG-TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred EEEECCCCCEEEEEEECC-CCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEEECCCC
T ss_conf 998626673899985057-5533599836898588997589939999978996788751013467507853788880589
Q ss_pred CEEEEEECCCEEEEEECCCCEEE---EEECC-----------CEEEEEEEECCCCEEEE-----------CCCCCEEEEE
Q ss_conf 99999746988999937885889---85169-----------73489887348968997-----------3589879999
Q T0558 155 NYLVPLFATSEVREIAPNGQLLN---SVKLS-----------GTPFSSAFLDNGDCLVA-----------CGDAHCFVQL 209 (294)
Q Consensus 155 ~~i~~g~~d~~i~~~d~~g~~~~---~~~~~-----------~~~~~~~~~~~g~~~v~-----------~~~~~~i~~~ 209 (294)
..+.....++.+.+++..+.... ..... .......+++++..++. ...+..+..|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCEEEEEE
T ss_conf 62577257870999993599359987661578853886263886277647699988999877998556762676069999
Q ss_pred ECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEE-EEECCCCEEECCCCCCCEEEE-ECCCCCEEEEEE
Q ss_conf 878985999844887641141134534893899899-980467714302477756999-908998999983
Q T0558 210 NLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY-ICNWQGHDREAGKGKHPQLVE-IDSEGKVVWQLN 278 (294)
Q Consensus 210 d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~-i~~~~~~~~~~~~~~~~~~~~-i~~~G~~vW~~~ 278 (294)
|..+++.+.++.++. +.++.+.+||+.+ +.+.....+..+....++++. +..+++-++.+.
T Consensus 292 D~~t~~~~~~~~~~~--------~~~~a~s~dg~~l~v~~~~~~~v~~~d~~~~~~v~~i~~~~~~~~~v~ 354 (361)
T 2oiz_A 292 DTKTKQRVARIPGRD--------ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGAAEASLQVQ 354 (361)
T ss_dssp ETTTTEEEEEEECTT--------CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEETTSCSSEEEEE
T ss_pred ECCCCCEEEEEECCC--------CCEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 899893999998989--------787999899999999989999899999999978799958999989999
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.43 E-value=1.6e-10 Score=92.22 Aligned_cols=196 Identities=11% Similarity=-0.063 Sum_probs=101.6
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCC-CEEE---EECCC--C
Q ss_conf 85899974798699998878829999944998731164790798399841--882899752677-0367---72377--7
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGR-ELWN---IAAPA--G 94 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~-~~~~---~~~~~--~ 94 (294)
..++++|+.|+.|.+|+..+++........+..........+++..+++. ++.+++|+.... .... ....+ .
T Consensus 69 ~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~~~~~~~wd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 69 DLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp SEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred CCEEEEEECCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCC
T ss_conf 97899980478336640256431000111111111111111001111235554220013113566540342100132113
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCE-EEECCCCCEEEEEECCCEEEEEECCC
Q ss_conf 63148787378758999705897999985689588999706776776674008-99969989999974698899993788
Q T0558 95 CEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQ-INKNKKGNYLVPLFATSEVREIAPNG 173 (294)
Q Consensus 95 ~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~s~dG~~i~~g~~d~~i~~~d~~g 173 (294)
.......+.++++.+++++.++.+.+|+...++.......... ....... ..+.+++..+++++.|+.+.+|+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~dg~i~~~~~~~ 225 (342)
T 1yfq_A 149 VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESG---LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECS---CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred CCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEE---CCCCCCEEEECCCCCCEEEEECCCCCEEEEEECC
T ss_conf 2210012100246543104773279886378862101000000---0355520452157887688653899189999158
Q ss_pred CE-------EEEE----------ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 58-------8985----------169734898873489689973589879999878985999844
Q T0558 174 QL-------LNSV----------KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 174 ~~-------~~~~----------~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
.. .... .+...+..+.++|+++++++++.|+.|++||.++++.+.++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~iWd~~~~~~l~~~~ 290 (342)
T 1yfq_A 226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred CCCCEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEC
T ss_conf 86510201342023433024777500247442016898889998789989999998894988815
No 111
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.41 E-value=6.3e-09 Score=80.58 Aligned_cols=198 Identities=12% Similarity=0.162 Sum_probs=117.5
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCC--------CCEEEEECCCCEEE-EECCEEEEEECC-CCCEEEEECC
Q ss_conf 8589997479869999887882999994499873--------11647907983998-418828997526-7703677237
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE--------CNSVAATKAGEILF-SYSKGAKMITRD-GRELWNIAAP 92 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~--------~~~~~~~pdG~~l~-s~~~~v~~~~~~-~~~~~~~~~~ 92 (294)
+..|..++.+++|+++|.+|||++|++....... ...++. .++++++ +.++.++.+|.+ |+++|+....
T Consensus 68 ~g~vYv~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~~g~a~-~~g~v~~~t~dg~l~AlDa~TG~~~W~~~~~ 146 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI-YGDKVFFGTLDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE-ETTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred CCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEE-ECCEEEEEECCCEEEEEECCCCCEEEEECCC
T ss_conf 999999879997999989999788798789986645455756788778-8999999927998999989999887563468
Q ss_pred CCCCEEE----EEECCC---CC-EEEEEE------CCCCEEEEECCCCCEEEEEECCCCCCC------------------
Q ss_conf 7763148----787378---75-899970------589799998568958899970677677------------------
Q T0558 93 AGCEMQT----ARILPD---GN-ALVAWC------GHPSTILEVNMKGEVLSKTEFETGIER------------------ 140 (294)
Q Consensus 93 ~~~~v~~----~~~~~d---g~-~l~~~s------~~~~~~~~~~~~G~~~~~~~~~~~~~~------------------ 140 (294)
....... ..+..+ +. .++.++ ..+.++.++..+|+++|++........
T Consensus 147 ~~~~~~~~t~~p~v~~~~~~~~~~v~~g~~~~~~~~~G~v~a~D~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (582)
T 1flg_A 147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSW 226 (582)
T ss_dssp CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTS
T ss_pred CCCCCCCCCCCCEEEECCEEEEEEEEECCCCEECCCCCEEEEEECCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCC
T ss_conf 88765311579879748758679999587530037666499997899967657413578765003556642110012355
Q ss_pred -----------------CCCCCCEEEECCCCCEEEEEE------------------------CCCEEEEEECC-CCEEEE
Q ss_conf -----------------667400899969989999974------------------------69889999378-858898
Q T0558 141 -----------------PHAQFRQINKNKKGNYLVPLF------------------------ATSEVREIAPN-GQLLNS 178 (294)
Q Consensus 141 -----------------~~~~~~~~~~s~dG~~i~~g~------------------------~d~~i~~~d~~-g~~~~~ 178 (294)
.........+.+....++.+. ....+..+|.+ |+..|.
T Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~g~vy~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~s~~AlD~~TG~~~W~ 306 (582)
T 1flg_A 227 PDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWF 306 (582)
T ss_dssp CBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEE
T ss_pred CCCCCCCCCCCCEEEECCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE
T ss_conf 56545656665127727864324402828788699526888765433555578842036765434149996788848898
Q ss_pred EECC----------CEEEEEE-EECCCC---EEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 5169----------7348988-734896---89973589879999878985999844
Q T0558 179 VKLS----------GTPFSSA-FLDNGD---CLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 179 ~~~~----------~~~~~~~-~~~~g~---~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
++.. ..+.-.. ...+|. .++....++.++++|.++|++++...
T Consensus 307 ~q~~~~d~wd~d~~~~p~l~~~~~~~G~~~~~v~~~~k~G~ly~Ldr~tG~~~~~~p 363 (582)
T 1flg_A 307 YQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp EESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCEECCCC
T ss_conf 526788532136787745614325799787789985898539986176785202323
No 112
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.41 E-value=1.2e-10 Score=93.17 Aligned_cols=116 Identities=8% Similarity=-0.111 Sum_probs=79.2
Q ss_pred CCCCCCCEEEE---E--CCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE------------CCEEEEEE
Q ss_conf 14788858999---7--4798699998878829999944998731164790798399841------------88289975
Q T0558 18 QGSSPQHLLVG---G--SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY------------SKGAKMIT 80 (294)
Q Consensus 18 ~~s~~~~~l~~---g--s~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~------------~~~v~~~~ 80 (294)
+.+++.+.+.. + +++.++.+||.++++++-+...+. . ..++++|||+.++.. +..+.+||
T Consensus 26 a~~~dg~~~~v~~~~~~~g~~~~~v~D~~~~~~~~~~~~~~-~--~~~~~spdg~~~~~~~~~~~~~~~g~r~~~v~v~D 102 (368)
T 1mda_H 26 GPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF-L--SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFD 102 (368)
T ss_dssp CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECT-T--CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEEC
T ss_pred CCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCC-C--CCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEE
T ss_conf 88987625799942545785169999689980899973788-7--76249899998999942455555578786699777
Q ss_pred CCCCCE-EEEECC------CCCCEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCEEEEEECCC
Q ss_conf 267703-677237------776314878737875899970-58979999856895889997067
Q T0558 81 RDGREL-WNIAAP------AGCEMQTARILPDGNALVAWC-GHPSTILEVNMKGEVLSKTEFET 136 (294)
Q Consensus 81 ~~~~~~-~~~~~~------~~~~v~~~~~~~dg~~l~~~s-~~~~~~~~~~~~G~~~~~~~~~~ 136 (294)
....+. +....+ .......++++|||+++++.+ .++.+.+|+..+++..+......
T Consensus 103 ~~t~~~~~~i~~p~~~~~~~~~~~~~~a~SpDG~~l~v~~~~~~~v~~~D~~~~~~~~~~~~~~ 166 (368)
T 1mda_H 103 PVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSAS 166 (368)
T ss_dssp TTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSS
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCC
T ss_conf 6889787787268765002278767659877999899993899979999999993989964897
No 113
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.41 E-value=3.5e-08 Score=75.20 Aligned_cols=253 Identities=11% Similarity=0.130 Sum_probs=160.9
Q ss_pred CCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEC--CEEEEEECCCCCEEEEECCCCC
Q ss_conf 14788858999747986999988788299999449987311647907983998418--8289975267703677237776
Q T0558 18 QGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYS--KGAKMITRDGRELWNIAAPAGC 95 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~--~~v~~~~~~~~~~~~~~~~~~~ 95 (294)
+-.+++.+.++....+.|..+|...+...+..+. ....+.++++.++|.+.++.. +.+..++.++............
T Consensus 26 ~~d~dG~vwv~~~~~~~i~~~d~~g~~~~~~~~~-~~~~~~~i~~d~~G~iw~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 104 (300)
T 2qc5_A 26 TSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPT-PDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDS 104 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTSCEEEEECSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTC
T ss_pred EECCCCCEEEEECCCCEEEEECCCCCEEEEECCC-CCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEECCCCCCCC
T ss_conf 9999999999974899799993999999997888-889756999999999999946883021000112100013323335
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCE
Q ss_conf 31487873787589997058979999856895889997067767766740089996998999997469889999378858
Q T0558 96 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQL 175 (294)
Q Consensus 96 ~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~ 175 (294)
.++++++.++|++.++......+ .....+++.. ++.... .......+++.+||++.++....+.+..++.++..
T Consensus 105 ~p~~i~~d~dG~iwv~~~~~~~v-~~~~~~~~~~-~~~~~~----~~~~~~~i~~d~dg~lwv~~~~~~~i~~~~~~~~~ 178 (300)
T 2qc5_A 105 GPYGITEGLNGDIWFTQLNGDRI-GKLTADGTIY-EYDLPN----KGSYPAFITLGSDNALWFTENQNNSIGRITNTGKL 178 (300)
T ss_dssp CEEEEEECSTTCEEEEETTTTEE-EEECTTSCEE-EEECSS----TTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCE
T ss_pred CCEEEEEECCCCEEEEECCEEEE-ECCCCCCCEE-EEECCC----CCCCCCEEEEECCCEEEEECCCCCEEEEEEEECCE
T ss_conf 63359995467578753120122-0024332200-000146----54465158972143079950452114675100001
Q ss_pred EEE-EE-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEE-EEECCCCCCCEEECCCCCEEECCCCCEEEEECCCC
Q ss_conf 898-51-6973489887348968997358987999987898599-98448876411411345348938998999804677
Q T0558 176 LNS-VK-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV-RRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGH 252 (294)
Q Consensus 176 ~~~-~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~ 252 (294)
... .. ....+..+.+.++|.++++...++.+..++... ++. ....... ..+.++...++|++++.++.+.
T Consensus 179 ~~~~~~~~~~~~~~i~~d~~G~iwv~~~~~~~i~~~~~~g-~~~~~~~~~~~------~~~~~i~~d~~g~lwv~~~~~~ 251 (300)
T 2qc5_A 179 EEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG-EISEYDIPTPN------ARPHAITAGKNSEIWFTEWGAN 251 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-CEEEEECSSTT------CCEEEEEECSTTCEEEEETTTT
T ss_pred EEEEEEECCCCCCEEECCCCCCEEEECCCCCEEEEEEECC-CCEEEEECCCC------CCCCCEEECCCCEEEEEECCCC
T ss_conf 4665410356651321364431264025598799998458-51689504564------2001268989996999975899
Q ss_pred EEEC-------------CCCCCCEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 1430-------------247775699990899899998358853788
Q T0558 253 DREA-------------GKGKHPQLVEIDSEGKVVWQLNDKVKFGMI 286 (294)
Q Consensus 253 ~~~~-------------~~~~~~~~~~i~~~G~~vW~~~~~~~~~~i 286 (294)
.+.. .....+.-+.++++|+ +|- .....++++
T Consensus 252 ~i~~~~~~g~~~~~~~~~~~~~p~~i~~d~dG~-lWv-a~~~~i~~~ 296 (300)
T 2qc5_A 252 QIGRITNDNTIQEYQLQTENAEPHGITFGKDGS-VWF-ALKCKIGKL 296 (300)
T ss_dssp EEEEECTTSCEEEEECCSTTCCCCCEEECTTSC-EEE-ECSSEEEEE
T ss_pred EEEEECCCCCEEEEECCCCCCCEEEEEECCCCC-EEE-EECCCEEEE
T ss_conf 699991999899997778999664999999997-999-968976888
No 114
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, LP_2219,NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.40 E-value=3.6e-08 Score=75.11 Aligned_cols=63 Identities=19% Similarity=0.101 Sum_probs=23.5
Q ss_pred CCCCCCCEEEEECCCC--EEEE--EECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE---CCEEEEEEC
Q ss_conf 1478885899974798--6999--98878829999944998731164790798399841---882899752
Q T0558 18 QGSSPQHLLVGGSGWN--KIAI--INKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY---SKGAKMITR 81 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~--~i~~--~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~ 81 (294)
+.+++++++++++.++ .|.+ +|..+.+.+.+.... +..+..++++|||++++.. ++.+.+++.
T Consensus 46 a~s~dg~ly~v~~~~~~~~v~~~~id~~t~~~~~~~~~~-~~~P~~ia~s~dg~~l~van~~~~~v~v~~~ 115 (347)
T 3hfq_A 46 ALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAP-GTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEE-SCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EECCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEEECC-CCCCEEEEECCCCCEEEEEECCCCCEEEECC
T ss_conf 997999599999258985199999879873697777167-8997899996999978987527993755023
No 115
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, protein structure initiative; 1.90A {Bacteroides uniformis atcc 8492}
Probab=99.40 E-value=5.2e-09 Score=81.23 Aligned_cols=243 Identities=12% Similarity=0.027 Sum_probs=94.8
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEEC-CC--CCCE
Q ss_conf 85899974798699998878829999944998731164790798399841--8828997526770367723-77--7631
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAA-PA--GCEM 97 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~-~~--~~~v 97 (294)
++++++...++.|.++|.+|++.+++.+.. ..+..+++++||+++++. ++.+..++....++..... .. ....
T Consensus 54 ~~lYv~~~~~~~I~viD~~t~~~~~~~~~~--~~p~~i~~~~dg~~~vs~~~~~~i~~~d~~t~~~~~~i~~~~~~~~~~ 131 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRITGF--TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEECC--SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred CEEEEEECCCCEEEEEECCCCEEEEEECCC--CCCCEEEECCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCCCCCCC
T ss_conf 999999968999999989888088760589--997267898999099997689941665277882999983167776789
Q ss_pred EEEEECCCCCEEEEEE--CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE----------CCCE
Q ss_conf 4878737875899970--589799998568958899970677677667400899969989999974----------6988
Q T0558 98 QTARILPDGNALVAWC--GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF----------ATSE 165 (294)
Q Consensus 98 ~~~~~~~dg~~l~~~s--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~----------~d~~ 165 (294)
....+.++++.++.++ .+..+.+++..+++..+++..... ...+.+++||+++++.. ..+.
T Consensus 132 ~~~~i~~~~~~~~v~~~~~~~~v~~id~~t~~~~~~~~~~~~-------~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 132 STEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ-------PTSLVMDKYNKMWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp BCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC-------BCCCEECTTSEEEEEBCCBCTTCSSCBCCCE
T ss_pred CCEEEEECCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCC-------EEEEEECCCCCEEEEECCCCCEEEEEECCCE
T ss_conf 824999759988997478980999998999929977715881-------4688981599799997999840467753750
Q ss_pred EEEEECCCCEEE-EEE--CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCC-
Q ss_conf 999937885889-851--6973489887348968997358987999987898599984488764114113453489389-
Q T0558 166 VREIAPNGQLLN-SVK--LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN- 241 (294)
Q Consensus 166 i~~~d~~g~~~~-~~~--~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~- 241 (294)
+...|..+.... ... ....+....+.++++.++..... ...++..+.+........ . ....+.++.+.++
T Consensus 205 v~~id~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~--~~~i~~~~~~~~~~~~~~-~---~~~~p~giav~p~~ 278 (328)
T 3dsm_A 205 LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINND--IWRMPVEADRVPVRPFLE-F---RDTKYYGLTVNPNN 278 (328)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESSS--EEEEETTCSSCCSSCSBC-C---CSSCEEEEEECTTT
T ss_pred EEEEECCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCC--EEEEEEECCCCEEEEEEE-C---CCCCEEEEEEECCC
T ss_conf 58995799818874014777603679995886689997797--699999879706899872-6---99998999997899
Q ss_pred CCEEEEECCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 989998046771430247775699990899899998358853788
Q T0558 242 GGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMI 286 (294)
Q Consensus 242 G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~vW~~~~~~~~~~i 286 (294)
+.+++.+.... .....++.+|.+|+++|++.-....+-|
T Consensus 279 ~~lyv~~~~~~------~~~g~v~v~d~~G~~i~~i~vG~~P~g~ 317 (328)
T 3dsm_A 279 GEVYVADAIDY------QQQGIVYRYSPQGKLIDEFYVGIIPGAF 317 (328)
T ss_dssp CCEEEEECTTS------SSEEEEEEECTTCCEEEEEEEEESEEEE
T ss_pred CEEEEEECCCC------CCCCEEEEECCCCCEEEEEEECCCCCEE
T ss_conf 99999977466------6599999998999899999919898989
No 116
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.39 E-value=4.1e-08 Score=74.66 Aligned_cols=241 Identities=14% Similarity=0.138 Sum_probs=135.8
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCC----CEEEEECCC---C-EEEEE--------CCEEEEEEC-CCCC
Q ss_conf 85899974798699998878829999944998731----164790798---3-99841--------882899752-6770
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWEC----NSVAATKAG---E-ILFSY--------SKGAKMITR-DGRE 85 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~----~~~~~~pdG---~-~l~s~--------~~~v~~~~~-~~~~ 85 (294)
+..|+.++.+++++++|.+|||++|+..+...... .+..+..++ . .++.+ .+.++.+|. .+++
T Consensus 117 ~g~v~~~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~t~~p~v~~~~~~~~~~v~~g~~~~~~~~~G~v~a~D~~TG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCCEECCCCCEEEEEECCCCCE
T ss_conf 99999992799899998999988756346888765311579879748758679999587530037666499997899967
Q ss_pred EEEEECCCCCC----------------------------------------EEEEEECCCCCEEEEEEC-----------
Q ss_conf 36772377763----------------------------------------148787378758999705-----------
Q T0558 86 LWNIAAPAGCE----------------------------------------MQTARILPDGNALVAWCG----------- 114 (294)
Q Consensus 86 ~~~~~~~~~~~----------------------------------------v~~~~~~~dg~~l~~~s~----------- 114 (294)
+|+........ -....+.+....++....
T Consensus 197 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~g~vy~~~~~~~~~~~~~~~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCC
T ss_conf 65741357876500355664211001235556545656665127727864324402828788699526888765433555
Q ss_pred -------------CCCEEEEECCCCCEEEEEECCCCCC----CCCCCCCEEEECCCCC---EEEEEECCCEEEEEECC-C
Q ss_conf -------------8979999856895889997067767----7667400899969989---99997469889999378-8
Q T0558 115 -------------HPSTILEVNMKGEVLSKTEFETGIE----RPHAQFRQINKNKKGN---YLVPLFATSEVREIAPN-G 173 (294)
Q Consensus 115 -------------~~~~~~~~~~~G~~~~~~~~~~~~~----~~~~~~~~~~~s~dG~---~i~~g~~d~~i~~~d~~-g 173 (294)
...+++++..+|+.+|.++...... ....+...-....||+ .++.+..+|.++++|++ |
T Consensus 277 ~~~~~~~~~d~~~~~s~~AlD~~TG~~~W~~q~~~~d~wd~d~~~~p~l~~~~~~~G~~~~~v~~~~k~G~ly~Ldr~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEECCCC
T ss_conf 57884203676543414999678884889852678853213678774561432579978778998589853998617678
Q ss_pred CEEEEEECCCEE----------------------------------------------EEEEEECCCCEEEECC------
Q ss_conf 588985169734----------------------------------------------8988734896899735------
Q T0558 174 QLLNSVKLSGTP----------------------------------------------FSSAFLDNGDCLVACG------ 201 (294)
Q Consensus 174 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~g~~~v~~~------ 201 (294)
+.+|.......+ ....+.|+...+++..
T Consensus 357 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~gg~~~~~~a~~p~~g~~~~~~~~~~~~ 436 (582)
T 1flg_A 357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKED 436 (582)
T ss_dssp CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEE
T ss_pred CEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEECCCCCCC
T ss_conf 52023235787532113677455123126767876578645784478627876764556613758886398633555543
Q ss_pred ---------------------------CCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEE
Q ss_conf ---------------------------89879999878985999844887641141134534893899899980467714
Q T0558 202 ---------------------------DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDR 254 (294)
Q Consensus 202 ---------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~ 254 (294)
..+.+..+|.++|+++|+...... ...+....++|-+++.
T Consensus 437 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~p------~~~g~~atagglvf~g------- 503 (582)
T 1flg_A 437 YWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP------LWAGVLATAGNLVFTG------- 503 (582)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC------CCSCCEEETTTEEEEE-------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCC------CCCCCEEECCCEEEEE-------
T ss_conf 331235656787531467542216789805999991788978710577999------8765089889989998-------
Q ss_pred ECCCCCCCEEEEECC-CCCEEEEEECC
Q ss_conf 302477756999908-99899998358
Q T0558 255 EAGKGKHPQLVEIDS-EGKVVWQLNDK 280 (294)
Q Consensus 255 ~~~~~~~~~~~~i~~-~G~~vW~~~~~ 280 (294)
..++.+.++|. +|++||+++-.
T Consensus 504 ----~~dg~l~A~Da~tG~~lW~~~~~ 526 (582)
T 1flg_A 504 ----TGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp ----CTTSEEEEEETTTCCEEEEEECS
T ss_pred ----CCCCEEEEEECCCCCEEEEEECC
T ss_conf ----88998999999999699898999
No 117
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.39 E-value=2e-09 Score=84.20 Aligned_cols=233 Identities=11% Similarity=0.005 Sum_probs=138.4
Q ss_pred HHCCCCCCCCEE-EEECCCCEEEEEEC--CCCEEEEEEECCCCCCCCEEEEECCCCEEEEE---CCEEEEEECCCCCEEE
Q ss_conf 200147888589-99747986999988--78829999944998731164790798399841---8828997526770367
Q T0558 15 PFAQGSSPQHLL-VGGSGWNKIAIINK--DTKEIVWEYPLEKGWECNSVAATKAGEILFSY---SKGAKMITRDGRELWN 88 (294)
Q Consensus 15 ~~~~~s~~~~~l-~~gs~~~~i~~~d~--~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~~~~~~~~ 88 (294)
...+.|++++.| ++++.+++|.+|+. ++|++........+..+..++++|||++++.. +..+..|+........
T Consensus 41 ~~la~SpDg~~L~v~~~~~~~v~~~~id~~~g~~~~~~~~~~~~~p~~va~spdG~~l~v~~~~~~~v~~~~~~~~~~~~ 120 (343)
T 1ri6_A 41 QPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVG 120 (343)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEE
T ss_pred EEEEEECCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCC
T ss_conf 27999389899999986899699999979997088831102599954999989999999995678853100000012210
Q ss_pred E--ECCCCCCEEEEEECCCCCEEEEEECC-CCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE-CCC
Q ss_conf 7--23777631487873787589997058-9799998568958899970677677667400899969989999974-698
Q T0558 89 I--AAPAGCEMQTARILPDGNALVAWCGH-PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF-ATS 164 (294)
Q Consensus 89 ~--~~~~~~~v~~~~~~~dg~~l~~~s~~-~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~-~d~ 164 (294)
. .......+.++.++|++++++..... ..+..|+...+...................+.+.+++++.+++... ..+
T Consensus 121 ~~~~~~~~~~~~~v~~spd~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 200 (343)
T 1ri6_A 121 VVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred CCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEEECCCCCEEEEECCEEECCCCCCCEEEEEECCCCEEEEEECCCC
T ss_conf 11014789873499998504431243201211569985699824431010154178888526786167734899850457
Q ss_pred EEEEEECC---CCEE--EEEE-------CCCEEEEEEEECCCCEE-EECCCCCEEEEEECC--CCEEE--EEECCCCCCC
Q ss_conf 89999378---8588--9851-------69734898873489689-973589879999878--98599--9844887641
Q T0558 165 EVREIAPN---GQLL--NSVK-------LSGTPFSSAFLDNGDCL-VACGDAHCFVQLNLE--SNRIV--RRVNANDIEG 227 (294)
Q Consensus 165 ~i~~~d~~---g~~~--~~~~-------~~~~~~~~~~~~~g~~~-v~~~~~~~i~~~d~~--~g~~~--~~~~~~~~~~ 227 (294)
...+++.. +... .... ....+....+.++|..+ ++...++.+.+|+.. ++... .....
T Consensus 201 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~~----- 275 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT----- 275 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-----
T ss_pred CCEEEECCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCEEEEEECCCCCEEEEEEEECC-----
T ss_conf 420000000015146766665520234676773027886301025860357894269998787767899988568-----
Q ss_pred EEECCCCCEEECCCCCE-EEEECCCCEE
Q ss_conf 14113453489389989-9980467714
Q T0558 228 VQLFFVAQLFPLQNGGL-YICNWQGHDR 254 (294)
Q Consensus 228 ~~~~~~~~~~~~~~G~i-~i~~~~~~~~ 254 (294)
...+.++.+.+||+. ++.+..++.+
T Consensus 276 --g~~p~~ia~SpDGk~l~v~~~~~~~v 301 (343)
T 1ri6_A 276 --ETQPRGFNVDHSGKYLIAAGQKSHHI 301 (343)
T ss_dssp --SSSCCCEEECTTSSEEEEECTTTCEE
T ss_pred --CCCEEEEEECCCCCEEEEEECCCCEE
T ss_conf --99653899938989999998899929
No 118
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=2.1e-09 Score=84.05 Aligned_cols=224 Identities=11% Similarity=0.074 Sum_probs=136.6
Q ss_pred CCCCCCCEEEEECCC-CEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEC-CEEEEEECCCCCEEEEECCCCC
Q ss_conf 147888589997479-86999988788299999449987311647907983998418-8289975267703677237776
Q T0558 18 QGSSPQHLLVGGSGW-NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYS-KGAKMITRDGRELWNIAAPAGC 95 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~-~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~-~~v~~~~~~~~~~~~~~~~~~~ 95 (294)
+.+++++++++.... +.|..++.. ++..+.........+..++++++|.++++.. ..+..+...+............
T Consensus 30 a~d~dG~iyv~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~P~gia~~~~g~i~v~d~~~~~v~~~~~~~~~~~~~~~~~~ 108 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGMYGRVVKLATG-STGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLN 108 (270)
T ss_dssp EECTTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCS
T ss_pred EECCCCCEEEEECCCCCEEEEECCC-CCEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCC
T ss_conf 9959999999961898889999999-956997436987784189981888888763101111111111100000001112
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCE
Q ss_conf 31487873787589997058979999856895889997067767766740089996998999997469889999378858
Q T0558 96 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQL 175 (294)
Q Consensus 96 ~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~ 175 (294)
.+..+++.++|+++++......+ .....+|+..+.+.... ......++++++|+++++...+++|+.++.++..
T Consensus 109 ~p~~iavd~~g~i~v~d~~~~~~-~~~~~~g~~~~~~~~~~-----~~~p~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~ 182 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRGNNRV-VKLAAGSKTQTVLPFTG-----LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp SEEEEEECTTCCEEEEEGGGTEE-EEECTTCCSCEECCCCS-----CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCEEEEEECCC-----CCCCEEEEECCCCCEEEEECCCCEEEEECCCCCE
T ss_conf 22100011123331111010000-11112211011010158-----7630168874899576531121012430243110
Q ss_pred EEEEE--CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCE
Q ss_conf 89851--6973489887348968997358987999987898599984488764114113453489389989998046771
Q T0558 176 LNSVK--LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHD 253 (294)
Q Consensus 176 ~~~~~--~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~ 253 (294)
.+... ....|..+.+.++|+++++....++++.++..+... ..... ..+..+.++.+.++|++++.++..+.
T Consensus 183 ~~~~~~~~~~~P~gi~~d~~G~lyv~d~~~~~i~~~~~~~~~~-~~~~~-----~~~~~P~gia~d~dg~lyVad~~~~~ 256 (270)
T 1rwi_B 183 QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPF-----TGLNTPLAVAVDSDRTVYVADRGNDR 256 (270)
T ss_dssp EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC-EECCC-----CSCSCEEEEEECTTCCEEEEEGGGTE
T ss_pred EEEEECCCCCCCCEEEEECCCCCEEEECCCCEEEEEECCCCEE-EEEEC-----CCCCCEEEEEECCCCCEEEEECCCCE
T ss_conf 1222023357872000100221125423899899995999879-99706-----99898279999089999999899999
Q ss_pred E
Q ss_conf 4
Q T0558 254 R 254 (294)
Q Consensus 254 ~ 254 (294)
+
T Consensus 257 I 257 (270)
T 1rwi_B 257 V 257 (270)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 119
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.39 E-value=6.7e-13 Score=109.61 Aligned_cols=194 Identities=11% Similarity=-0.019 Sum_probs=133.6
Q ss_pred CCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEE-ECCEEEEEECC-CCCEEEEECCCCC
Q ss_conf 147888589997479869999887882999994499873116479079839984-18828997526-7703677237776
Q T0558 18 QGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-YSKGAKMITRD-GRELWNIAAPAGC 95 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s-~~~~v~~~~~~-~~~~~~~~~~~~~ 95 (294)
..+-++.+|++++.|++|+++|.+||+++|+++.+... .+.....++.+++. .++.+++++.+ ++.+|+.......
T Consensus 4 ~~~v~~~~v~v~t~dG~l~alD~~TG~~~W~~~~~~~v--~~~~~~~~~~v~~~~~dG~ly~ld~~tg~~~~~~~~~~~~ 81 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVL--QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp ----CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSC--CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH
T ss_pred CCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCC--EECCEEECCEEEEECCCCEEEEEECCCCCEEEEECCCCCC
T ss_conf 88888999999928998999999999899997089961--4160984999999889997999989999888985267897
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEEC-CCC
Q ss_conf 3148787378758999705897999985689588999706776776674008999699899999746988999937-885
Q T0558 96 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP-NGQ 174 (294)
Q Consensus 96 ~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~-~g~ 174 (294)
.+....+..+...++.++.++.++.++..+|+..|.+..... ....+.+..++.++.++.++.+|. +|+
T Consensus 82 ~v~~s~~~~~d~~~~~g~~~~~~~~~d~~tG~~~~~~~~~~~----------~~~~~~~~~~~~g~~~~~~~a~d~~tG~ 151 (369)
T 2hz6_A 82 LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----------DSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHTTCSCC-----CCCCEEEEEEEEECCC--------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred CEECCCEEECCCEEEEECCCCCEEEEECCCCCEEEEECCCCC----------CCCCCCCCCEEECCCCEEEEEEECCCCC
T ss_conf 042243087697799734899488776289868887546777----------6423345410304652024667779998
Q ss_pred EEEEEECCCEEEEEE--EECCCCEEEECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 889851697348988--7348968997358987999987898599984488
Q T0558 175 LLNSVKLSGTPFSSA--FLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 223 (294)
Q Consensus 175 ~~~~~~~~~~~~~~~--~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~ 223 (294)
.+|++.......... ....+..+++++.++.++.+|.++|+++|+....
T Consensus 152 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~l~alD~~tG~~lW~~~~~ 202 (369)
T 2hz6_A 152 LRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA 202 (369)
T ss_dssp CCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS
T ss_pred EEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECC
T ss_conf 889888577568765542016856998068874999999999799998389
No 120
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, LP_2219,NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.38 E-value=2.2e-08 Score=76.67 Aligned_cols=244 Identities=13% Similarity=0.098 Sum_probs=139.9
Q ss_pred EEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CC--EEEEEECCCCC--EEEEECCCCCCEEEEEECCCCCE
Q ss_conf 99998878829999944998731164790798399841--88--28997526770--36772377763148787378758
Q T0558 35 IAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SK--GAKMITRDGRE--LWNIAAPAGCEMQTARILPDGNA 108 (294)
Q Consensus 35 i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~--~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~dg~~ 108 (294)
++.+|.+++++.-.........+..++++|||++++.. +. .+..|..++.. ...........+..++++|||++
T Consensus 20 ~~~~d~~~g~lt~~~~~~~~~~P~~la~s~dg~ly~v~~~~~~~~v~~~~id~~t~~~~~~~~~~~~~P~~ia~s~dg~~ 99 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQL 99 (347)
T ss_dssp EEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTE
T ss_pred EEEEECCCCCEEECCCCCCCCCCCEEEECCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCE
T ss_conf 99997999958873212448999869997999599999258985199999879873697777167899789999699997
Q ss_pred EEEEEC-CCCEEEEECCCCCEEEEEECC--CCC----CCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC--CCEEE--
Q ss_conf 999705-897999985689588999706--776----7766740089996998999997469889999378--85889--
Q T0558 109 LVAWCG-HPSTILEVNMKGEVLSKTEFE--TGI----ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN--GQLLN-- 177 (294)
Q Consensus 109 l~~~s~-~~~~~~~~~~~G~~~~~~~~~--~~~----~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~--g~~~~-- 177 (294)
++++.. ++.+.+++............. ... .........+...+++++++.......+..|+.. +....
T Consensus 100 l~van~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~ 179 (347)
T 3hfq_A 100 VYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEE
T ss_pred EEEEECCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEEECCCCCEEECC
T ss_conf 89875279937550236898335555530258764113469984179804542699965899836789863664046512
Q ss_pred --EEECCCEEEEEEEECCCCEEEECCC-CCE--EEEEECCCCEEEEEE--CCCCCCCEEECCCCCEEECCCCC-EEEEEC
Q ss_conf --8516973489887348968997358-987--999987898599984--48876411411345348938998-999804
Q T0558 178 --SVKLSGTPFSSAFLDNGDCLVACGD-AHC--FVQLNLESNRIVRRV--NANDIEGVQLFFVAQLFPLQNGG-LYICNW 249 (294)
Q Consensus 178 --~~~~~~~~~~~~~~~~g~~~v~~~~-~~~--i~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~G~-i~i~~~ 249 (294)
.......|..+.+++++..++.... ++. ++.+|..++.+.... ..............++.+.+||+ +++.+.
T Consensus 180 ~~~~~~g~~P~~~~~~~~~~~~~v~~~~s~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyva~~ 259 (347)
T 3hfq_A 180 VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEC
T ss_conf 49737888664799951455125750565301357761467845787662000146788875167899279868997661
Q ss_pred CCCEEEC----------------CCCCCCEEEEECCCCCEEEEEE
Q ss_conf 6771430----------------2477756999908998999983
Q T0558 250 QGHDREA----------------GKGKHPQLVEIDSEGKVVWQLN 278 (294)
Q Consensus 250 ~~~~~~~----------------~~~~~~~~~~i~~~G~~vW~~~ 278 (294)
...++.. ..+..++-+++++||+.++--.
T Consensus 260 ~~~~i~v~~~~~~g~l~~i~~~~~~g~~P~~la~spdG~~lyva~ 304 (347)
T 3hfq_A 260 GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCEEEEEE
T ss_conf 799699999899996899999937998762899907999999996
No 121
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.38 E-value=1.2e-08 Score=78.48 Aligned_cols=199 Identities=11% Similarity=0.118 Sum_probs=121.7
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCC----------CCCEEEEECCCCEEEEECCEEEEEECC-CCCEEEEEC
Q ss_conf 858999747986999988788299999449987----------311647907983998418828997526-770367723
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGW----------ECNSVAATKAGEILFSYSKGAKMITRD-GRELWNIAA 91 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~----------~~~~~~~~pdG~~l~s~~~~v~~~~~~-~~~~~~~~~ 91 (294)
+..+..++..+.|+++|.+||+++|+|...... ....+++..+.-++.+.++.++.+|.. |+.+|+...
T Consensus 66 ~G~vYv~t~~~~V~AlDa~TG~~lW~~d~~~~~~~~~~~~~~~~~rgva~~~~~v~~gt~dg~L~ALDa~TG~~~W~~~~ 145 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCEEEEEECCCCCEEEECCC
T ss_conf 99999978999499996899987988778777644554445777675168799799993899899999999968861476
Q ss_pred CCCCCEEEE--EECCCCCEEEEEEC------CCCEEEEECCCCCEEEEEECCCCCCC-----------------------
Q ss_conf 777631487--87378758999705------89799998568958899970677677-----------------------
Q T0558 92 PAGCEMQTA--RILPDGNALVAWCG------HPSTILEVNMKGEVLSKTEFETGIER----------------------- 140 (294)
Q Consensus 92 ~~~~~v~~~--~~~~dg~~l~~~s~------~~~~~~~~~~~G~~~~~~~~~~~~~~----------------------- 140 (294)
........+ ++..-++.++.++. .+.+..++..+|+++|++........
T Consensus 146 ~d~~~~~~~t~aP~i~~g~ViiG~~~~~~~~~G~v~A~D~~TG~~~W~~~t~p~~~~~p~~~~~~~~~~~t~~~~~~~~~ 225 (668)
T 1kv9_A 146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKL 225 (668)
T ss_dssp SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHH
T ss_pred CCCCCCCEECCCCEECCCEEEECCCCEECCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEC
T ss_conf 67777621034861407759934752003776617999887871765655314555677767533335545678741342
Q ss_pred --CCCCCCEEEECCCCCEEEEEEC-------------------CCEEEEEEC-CCCEEEEEECC----------CEEEEE
Q ss_conf --6674008999699899999746-------------------988999937-88588985169----------734898
Q T0558 141 --PHAQFRQINKNKKGNYLVPLFA-------------------TSEVREIAP-NGQLLNSVKLS----------GTPFSS 188 (294)
Q Consensus 141 --~~~~~~~~~~s~dG~~i~~g~~-------------------d~~i~~~d~-~g~~~~~~~~~----------~~~~~~ 188 (294)
.........+.+..++++.+.. ...|..+|. +|+..|.++.- ..+.-.
T Consensus 226 ~~Gg~vW~~~s~D~~~~lvy~~tgn~~p~~~~~~~~~~gdnly~~SivAlD~~TGe~~W~~Q~~~~D~WDyd~~~~~~L~ 305 (668)
T 1kv9_A 226 GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLA 305 (668)
T ss_dssp CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEE
T ss_conf 79875577754364557057755788777666657766665455516755077874554012256765554555530344
Q ss_pred EEECCCC---EEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 8734896---89973589879999878985999844
Q T0558 189 AFLDNGD---CLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 189 ~~~~~g~---~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
.+..+|+ .++.....+.++++|.+||++++...
T Consensus 306 d~~~~G~~~~vl~~~~K~G~~yvLDr~tGe~i~~~~ 341 (668)
T 1kv9_A 306 ELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCC
T ss_conf 330789688877863777537998568882146444
No 122
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.37 E-value=3.2e-08 Score=75.48 Aligned_cols=243 Identities=12% Similarity=0.150 Sum_probs=138.4
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCC---CCCEEEEECCCCEEEEE-------CCEEEEEEC-CCCCEEEEEC
Q ss_conf 858999747986999988788299999449987---31164790798399841-------882899752-6770367723
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGW---ECNSVAATKAGEILFSY-------SKGAKMITR-DGRELWNIAA 91 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~---~~~~~~~~pdG~~l~s~-------~~~v~~~~~-~~~~~~~~~~ 91 (294)
+..|+.++.+++|+++|.+|||++|++...... .+......-++.+++.. .+.+..+|. +|+++|++..
T Consensus 117 ~~~v~~gt~dg~L~ALDa~TG~~~W~~~~~d~~~~~~~t~aP~i~~g~ViiG~~~~~~~~~G~v~A~D~~TG~~~W~~~t 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCEECCCCEECCCEEEECCCCEECCCCCCEEEEECCCCEEEEEEEE
T ss_conf 99799993899899999999968861476677776210348614077599347520037766179998878717656553
Q ss_pred CCCC-----------------------------CE-EEEEECCCCCEEEEEEC-------------------CCCEEEEE
Q ss_conf 7776-----------------------------31-48787378758999705-------------------89799998
Q T0558 92 PAGC-----------------------------EM-QTARILPDGNALVAWCG-------------------HPSTILEV 122 (294)
Q Consensus 92 ~~~~-----------------------------~v-~~~~~~~dg~~l~~~s~-------------------~~~~~~~~ 122 (294)
.... .+ ..+++.|..+.++.+.+ ...++.++
T Consensus 197 ~p~~~~~p~~~~~~~~~~~t~~~~~~~~~~~Gg~vW~~~s~D~~~~lvy~~tgn~~p~~~~~~~~~~gdnly~~SivAlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 14555677767533335545678741342798755777543645570577557887776666577666654555167550
Q ss_pred CCCCCEEEEEECCCCCCC---CCCCCCEEEECCCCC---EEEEEECCCEEEEEECC-CCEEEEEECCCEEE---------
Q ss_conf 568958899970677677---667400899969989---99997469889999378-85889851697348---------
Q T0558 123 NMKGEVLSKTEFETGIER---PHAQFRQINKNKKGN---YLVPLFATSEVREIAPN-GQLLNSVKLSGTPF--------- 186 (294)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~---~~~~~~~~~~s~dG~---~i~~g~~d~~i~~~d~~-g~~~~~~~~~~~~~--------- 186 (294)
..+|+..|.++....-.- .......+.+..||+ .++.+..+|.++++|+. |+.+|........+
T Consensus 277 ~~TGe~~W~~Q~~~~D~WDyd~~~~~~L~d~~~~G~~~~vl~~~~K~G~~yvLDr~tGe~i~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77874554012256765554555530344330789688877863777537998568882146444565333233364458
Q ss_pred ----------------------------EEEEECCCCEEEE-C-----------------------------------CC
Q ss_conf ----------------------------9887348968997-3-----------------------------------58
Q T0558 187 ----------------------------SSAFLDNGDCLVA-C-----------------------------------GD 202 (294)
Q Consensus 187 ----------------------------~~~~~~~g~~~v~-~-----------------------------------~~ 202 (294)
...+.|+-+.++. . ..
T Consensus 357 ~p~~~~~~~~~~~~~~~~pg~~Gg~nW~~~a~dP~tgl~yip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CEECCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 41114345545773375368777777766424688886997201166422235655334455445766666667887777
Q ss_pred CCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECC-CCCEEEEEECCC
Q ss_conf 9879999878985999844887641141134534893899899980467714302477756999908-998999983588
Q T0558 203 AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS-EGKVVWQLNDKV 281 (294)
Q Consensus 203 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~-~G~~vW~~~~~~ 281 (294)
.+.+..||..+|+++|+..... ...++...+.+| ++.. ...++.+.++|. +|++||+++-..
T Consensus 437 ~G~l~A~D~~tGk~~W~~~~~~------p~~gG~lsTaGg-LvF~----------G~~dg~l~A~Da~TGe~LW~~~~~~ 499 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPT------HWNGGTLSTAGN-LVFQ----------GTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESS------SCCCCEEEETTT-EEEE----------ECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCCEEEEECCCCEEEEEEECCC------CCCCCCEECCCC-EEEE----------ECCCCEEEEEECCCCCEEEEEECCC
T ss_conf 7745887067785751550588------655875732785-4887----------5589849999998897867997899
Q ss_pred C
Q ss_conf 5
Q T0558 282 K 282 (294)
Q Consensus 282 ~ 282 (294)
-
T Consensus 500 ~ 500 (668)
T 1kv9_A 500 G 500 (668)
T ss_dssp C
T ss_pred C
T ss_conf 8
No 123
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, protein structure initiative; 1.90A {Bacteroides uniformis atcc 8492}
Probab=99.37 E-value=1.5e-08 Score=77.91 Aligned_cols=242 Identities=11% Similarity=-0.002 Sum_probs=151.6
Q ss_pred CCCCEEEEEECCCCEEEEEEEC-----CCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEEEEE
Q ss_conf 4798699998878829999944-----998731164790798399841--882899752677036772377763148787
Q T0558 30 SGWNKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQTARI 102 (294)
Q Consensus 30 s~~~~i~~~d~~tg~~~w~~~~-----~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 102 (294)
+.+++|.++|.++++++.+... .-+.....+... +++++++. ++.+.++|..+.+....... ......+++
T Consensus 14 ~~~gti~~~d~~t~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~lYv~~~~~~~I~viD~~t~~~~~~~~~-~~~p~~i~~ 91 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHF 91 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEE
T ss_pred CCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEE-CCEEEEEECCCCEEEEEECCCCEEEEEECC-CCCCCEEEE
T ss_conf 999889999999999999997488875348762179996-999999996899999998988808876058-999726789
Q ss_pred CCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE--ECCCEEEEEECC-CCEEEEE
Q ss_conf 3787589997058979999856895889997067767766740089996998999997--469889999378-8588985
Q T0558 103 LPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL--FATSEVREIAPN-GQLLNSV 179 (294)
Q Consensus 103 ~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g--~~d~~i~~~d~~-g~~~~~~ 179 (294)
.+||+.+++...+..+..++..+++..+.+........... .....+|++.+++. ..+..+.++|.. ++.++..
T Consensus 92 ~~dg~~~vs~~~~~~i~~~d~~t~~~~~~i~~~~~~~~~~~---~~~i~~~~~~~~v~~~~~~~~v~~id~~t~~~~~~~ 168 (328)
T 3dsm_A 92 LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGS---TEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCB---CCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCCCCCCCC---CEEEEECCCEEEEEECCCCEEEEEEECCCCEEEEEE
T ss_conf 89990999976899416652778829999831677767898---249997599889974789809999989999299777
Q ss_pred ECCCEEEEEEEECCCCEEEECC----------CCCEEEEEECCCCEEEEEECCCCCC---CEEECCCCCEEECCCCCEEE
Q ss_conf 1697348988734896899735----------8987999987898599984488764---11411345348938998999
Q T0558 180 KLSGTPFSSAFLDNGDCLVACG----------DAHCFVQLNLESNRIVRRVNANDIE---GVQLFFVAQLFPLQNGGLYI 246 (294)
Q Consensus 180 ~~~~~~~~~~~~~~g~~~v~~~----------~~~~i~~~d~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~G~i~i 246 (294)
.....+..+.+.++|+.++++. .++.+..+|..+.++.......... ...........+..++....
T Consensus 169 ~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~v~~id~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~ 248 (328)
T 3dsm_A 169 TIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWR 248 (328)
T ss_dssp ECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESSSEEE
T ss_pred ECCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCEEE
T ss_conf 15881468898159979999799984046775375058995799818874014777603679995886689997797699
Q ss_pred EECCCCEE-----ECCCCCCCEEEEECCCCCEEEE
Q ss_conf 80467714-----3024777569999089989999
Q T0558 247 CNWQGHDR-----EAGKGKHPQLVEIDSEGKVVWQ 276 (294)
Q Consensus 247 ~~~~~~~~-----~~~~~~~~~~~~i~~~G~~vW~ 276 (294)
.+...... ....+..+.-++++++++.+|-
T Consensus 249 i~~~~~~~~~~~~~~~~~~~p~giav~p~~~~lyv 283 (328)
T 3dsm_A 249 MPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYV 283 (328)
T ss_dssp EETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEE
T ss_pred EEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEE
T ss_conf 99987970689987269999899999789999999
No 124
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=99.37 E-value=9.6e-09 Score=79.25 Aligned_cols=245 Identities=14% Similarity=0.078 Sum_probs=160.0
Q ss_pred CEEEEEECCCCEEEEEEECCCC-----------CCCCEEEEECCCCEEEEECCEEEEEECCCCCEEEEECCCCC--CEEE
Q ss_conf 8699998878829999944998-----------73116479079839984188289975267703677237776--3148
Q T0558 33 NKIAIINKDTKEIVWEYPLEKG-----------WECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGC--EMQT 99 (294)
Q Consensus 33 ~~i~~~d~~tg~~~w~~~~~~~-----------~~~~~~~~~pdG~~l~s~~~~v~~~~~~~~~~~~~~~~~~~--~v~~ 99 (294)
...+++|. .|+++|-+..... .........++|.+.+...+.++.+|..|+.+|.+..+... .-+.
T Consensus 175 ~~~~~~D~-~G~vRW~~~~~~~~d~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~e~D~~G~v~~~y~lp~~~~~~HHD 253 (571)
T 3elq_A 175 PFTFIVDT-EGEYRWWLDQDTFYDGRDRDINKRGYLMGIRETPRGTFTAVQGQHWYEFDMMGQVLEDHKLPRGFADATHE 253 (571)
T ss_dssp EEEEEECT-TSCEEEECCGGGTCCSSSCCGGGCSCCEEEEECTTSCEEEEEBTEEEEECTTCCEEEEEECCTTEECBCSC
T ss_pred CCEEEECC-CCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCC
T ss_conf 72289979-98689983577333320001468852877775688755650276477735889779999889876655655
Q ss_pred EEECCCCCEEEEEECC-------------CCEEEEECCCCCEEEEEECCCCCCC--------------------------
Q ss_conf 7873787589997058-------------9799998568958899970677677--------------------------
Q T0558 100 ARILPDGNALVAWCGH-------------PSTILEVNMKGEVLSKTEFETGIER-------------------------- 140 (294)
Q Consensus 100 ~~~~~dg~~l~~~s~~-------------~~~~~~~~~~G~~~~~~~~~~~~~~-------------------------- 140 (294)
+.+.|+|++|+.+... ...++..+++|+++|++........
T Consensus 254 ~~~lpNGN~Lilv~~~~~~~~~g~~~~~v~D~IiEiD~tGevV~eWd~~dhl~~~~~~~~~~~d~~~~~~n~~~~~~~~~ 333 (571)
T 3elq_A 254 SIETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVDKSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQ 333 (571)
T ss_dssp EEECTTSCEEEEEEETTEECTTSCEECCCSCEEEEECTTSCEEEEEEHHHHSCTTCCTTGGGSBTTC-------CCCSCB
T ss_pred CEECCCCCEEEEEECCCCCCCCCCCCCEECCEEEEECCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 16879998999997244544457778665779999999997899987278348301344222333333456443464420
Q ss_pred -----------------C--CCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCC------------------
Q ss_conf -----------------6--674008999699899999746988999937885889851697------------------
Q T0558 141 -----------------P--HAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSG------------------ 183 (294)
Q Consensus 141 -----------------~--~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~~~~~~~~------------------ 183 (294)
. -..++++.+.+++..|++.+....+...+.+++..|....+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~DW~H~NsI~yd~~~d~ii~S~r~~~vi~I~~~~~i~W~lg~~~gw~~~~~~~~l~p~~~~G 413 (571)
T 3elq_A 334 AKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQGVVKIGRDKQVKWILAPSKGWEKPLASKLLKPVDANG 413 (571)
T ss_dssp CCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEEEETTTEEEEEETTSCEEEEESCSTTCCTTGGGGBCEEBCTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 00255555676667787554418665146899998999617525999968995899946887876211233354223467
Q ss_pred --------------------EEEEEEEECCCCEEEECCC----------------CCEEEEEECCCCE--EEEEECCCCC
Q ss_conf --------------------3489887348968997358----------------9879999878985--9998448876
Q T0558 184 --------------------TPFSSAFLDNGDCLVACGD----------------AHCFVQLNLESNR--IVRRVNANDI 225 (294)
Q Consensus 184 --------------------~~~~~~~~~~g~~~v~~~~----------------~~~i~~~d~~~g~--~~~~~~~~~~ 225 (294)
.-+.+...++|++++.... ....+.+|.+++. ++|++.....
T Consensus 414 ~~~~~~~~~~~~~~df~~~~~QH~~~~~~~g~i~~FDNg~~r~~~~~~~~~~~~Sr~v~y~ID~~~~T~~~vw~Y~~~~~ 493 (571)
T 3elq_A 414 KPITCNENGLCENSDFDFTYTQHTAWISSKGTLTIFDNGDGRHLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERG 493 (571)
T ss_dssp CBCCBCTTSCBSSSSCCCCSSCEEEEECTTSCEEEEECCTTGGGSCCSSGGGCCCEEEEEEEETTTTEEEEEEEECGGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCC
T ss_conf 51224655533456665215650538879980999868997777766678888653899997589983898789447898
Q ss_pred CCEEECCCCCEEECCCCCEEEEECCC-CEEECCCCCCCEEEEECC-CCCEEEEEE
Q ss_conf 41141134534893899899980467-714302477756999908-998999983
Q T0558 226 EGVQLFFVAQLFPLQNGGLYICNWQG-HDREAGKGKHPQLVEIDS-EGKVVWQLN 278 (294)
Q Consensus 226 ~~~~~~~~~~~~~~~~G~i~i~~~~~-~~~~~~~~~~~~~~~i~~-~G~~vW~~~ 278 (294)
..+.....++.+.++||++++..... .--.........+.+++. .++++|++.
T Consensus 494 ~~~yS~~~s~~q~L~nGN~lI~~G~~~~~~e~~~~~~~~i~Ev~~~~~ev~~e~~ 548 (571)
T 3elq_A 494 YDFYSPITSIIEYQADRNTMFGFGGSIHLFDVGQPTVGKLNEIDYKTKEVKVEID 548 (571)
T ss_dssp GGGCCSSCCEEEEETTTTEEEEEEEEETTTSTTSEEEEEEEEEETTTCCEEEEEE
T ss_pred CCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE
T ss_conf 6543686542389089999999588765211268885169998369961999998
No 125
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.37 E-value=6e-08 Score=73.47 Aligned_cols=238 Identities=13% Similarity=0.066 Sum_probs=149.3
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEC------CEEEEEECCCCCEEEEECC--
Q ss_conf 88858999747986999988788299999449987311647907983998418------8289975267703677237--
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYS------KGAKMITRDGRELWNIAAP-- 92 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~------~~v~~~~~~~~~~~~~~~~-- 92 (294)
++++++++....++|+-||+++++....+ ......+..++++|||+++++.. ..+...+..++.+......
T Consensus 54 ~~G~Ly~vD~~~g~I~r~~p~g~~~~~~~-~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 132 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPF-VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS 132 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEE-ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS
T ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEE-ECCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCCCC
T ss_conf 99989999779999999989999699998-38999722799999999999947996212217875289962554316887
Q ss_pred CCCCEEEEEECCCCCEEEEEECC-----CCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE-ECCCEE
Q ss_conf 77631487873787589997058-----979999856895889997067767766740089996998999997-469889
Q T0558 93 AGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL-FATSEV 166 (294)
Q Consensus 93 ~~~~v~~~~~~~dg~~l~~~s~~-----~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g-~~d~~i 166 (294)
.......+.+.|+|++.++.... ...+.....+|+.+..... .....+.++++|||+.|++. +..+.|
T Consensus 133 ~~~~~nd~~~d~~G~l~~td~~~~~~~~~g~~~~~~~~g~~~~~~~~------~~~~pNGia~spdg~~lyv~dt~~~~I 206 (333)
T 2dg1_A 133 TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ------NISVANGIALSTDEKVLWVTETTANRL 206 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE------EESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred CCCCCCCEEEECCCCEEEECCCCCEECCCCCEEEECCCCCEEEEECC------CCCCCCCEEECCCCCCEEEECCCCCCE
T ss_conf 65577644674257712210376110488824786365431244104------444000000011233205401578914
Q ss_pred EEEEC--CCCEEEE--------EECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCE
Q ss_conf 99937--8858898--------5169734898873489689973589879999878985999844887641141134534
Q T0558 167 REIAP--NGQLLNS--------VKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQL 236 (294)
Q Consensus 167 ~~~d~--~g~~~~~--------~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
+.++. .+...+. ......|-++++..+|+++++...+++|.+++. +|+++.++................
T Consensus 207 ~~~~~~~dg~~~~~~~~~~~~~~~~~~~PDGlavD~dGnL~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~t~~ 285 (333)
T 2dg1_A 207 HRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHP 285 (333)
T ss_dssp EEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEE
T ss_pred EEEEECCCCCEECCCCCCEEEECCCCCCCEECCCCCCCCEEEEECCCCEEEEECC-CCCEEEEEECCCCCCCCCCCEEEE
T ss_conf 8999758984621346410110267533302449899899998604998999979-997989996987578867504777
Q ss_pred EECCCCCEEEEECCCCEEECCCCCCCEEEEECCC
Q ss_conf 8938998999804677143024777569999089
Q T0558 237 FPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSE 270 (294)
Q Consensus 237 ~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~ 270 (294)
.+.++++.++..... ......+.++.++..
T Consensus 286 af~~~~~~l~~t~~~----~~~~~~g~l~~~~~~ 315 (333)
T 2dg1_A 286 QFIPGTNQLIICSND----IEMGGGSMLYTVNGF 315 (333)
T ss_dssp EECTTSCEEEEEEEC----GGGTCCEEEEEEECS
T ss_pred EEECCCCEEEEECCC----CCCCCCCEEEEECCC
T ss_conf 881799889998578----777997349997698
No 126
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, zinc, calcium, lyase, peptide amidation, HG- MAD, Zn-MAD, alternative splicing; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.36 E-value=4.7e-09 Score=81.50 Aligned_cols=215 Identities=12% Similarity=0.077 Sum_probs=109.0
Q ss_pred CCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECC----------CCCCEEE
Q ss_conf 98699998878829999944998731164790798399841--88289975267703677237----------7763148
Q T0558 32 WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAP----------AGCEMQT 99 (294)
Q Consensus 32 ~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~----------~~~~v~~ 99 (294)
++.|..+|.++++++..+..+.-...+.+++.++|++++++ ...++.++.+++.......+ .-..+..
T Consensus 68 ~~~i~~~d~~~~~~~~~~g~~~~~~p~gi~vd~~G~vyV~D~~~~~V~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~~ 147 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred CCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEE
T ss_conf 88689995999979864379853683579986899899973899989998266424899983457886777685699639
Q ss_pred EEECCC-CCEEEEEECCCCEEEEECCCCCEEEEEECCCCCC----CCCCCCCEEEECCCC-CEEEEEECCCEEEEEECCC
Q ss_conf 787378-7589997058979999856895889997067767----766740089996998-9999974698899993788
Q T0558 100 ARILPD-GNALVAWCGHPSTILEVNMKGEVLSKTEFETGIE----RPHAQFRQINKNKKG-NYLVPLFATSEVREIAPNG 173 (294)
Q Consensus 100 ~~~~~d-g~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~----~~~~~~~~~~~s~dG-~~i~~g~~d~~i~~~d~~g 173 (294)
+++.|+ |.++++.+..+..+..++.+|+.++.+....... +......++++.+++ +++++-...+.|.+|+.++
T Consensus 148 iavd~~~g~iyv~d~~~n~rI~~~d~~G~~~~~~G~~~~~~~~~~g~~~~P~~iai~~~~g~lyVaD~~n~~I~~~~~~~ 227 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEECCC
T ss_conf 99979999699964776448999758885898315667677777654267507898605984899817994899996899
Q ss_pred -CEEEEEECC---C------EEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCC
Q ss_conf -588985169---7------348988734896899735898799998789859998448876411411345348938998
Q T0558 174 -QLLNSVKLS---G------TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG 243 (294)
Q Consensus 174 -~~~~~~~~~---~------~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 243 (294)
..++..... . .+...++.++|+.+++......+..++..+++++....... ..+..+.++.+.++|+
T Consensus 228 ~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~g~~yv~d~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~P~giavd~~G~ 304 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR---KHFDMPHDIVASEDGT 304 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSS---SCCSSEEEEEECTTSE
T ss_pred CEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEECCCC---CCCCCEEEEEECCCCC
T ss_conf 9499997123347743232554347782599899985788439999899996996317999---8648978999949996
Q ss_pred EEEEEC
Q ss_conf 999804
Q T0558 244 LYICNW 249 (294)
Q Consensus 244 i~i~~~ 249 (294)
++|..+
T Consensus 305 iyVaD~ 310 (329)
T 3fvz_A 305 VYIGDA 310 (329)
T ss_dssp EEEEES
T ss_pred EEEEEC
T ss_conf 999989
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein/lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.35 E-value=7.6e-08 Score=72.70 Aligned_cols=238 Identities=11% Similarity=0.045 Sum_probs=142.5
Q ss_pred CCCCCCCEEEEECCCC-----EEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEE-E----CCEEEEEECCCCCEE
Q ss_conf 1478885899974798-----69999887882999994499873116479079839984-1----882899752677036
Q T0558 18 QGSSPQHLLVGGSGWN-----KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-Y----SKGAKMITRDGRELW 87 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~-----~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s-~----~~~v~~~~~~~~~~~ 87 (294)
.+--..+++.+...++ .|.+.|.+.++.. +. +.+......++++|||+.++. . ...+++.+..++...
T Consensus 139 ~g~f~triafv~~~~~~~~~~~l~i~D~dG~~~~-~l-t~~~~~~~~P~wSPDGk~Iay~s~~~~~~~i~~~~~~~g~~~ 216 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQF-VV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR 216 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCE-EE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred CCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEE-EE-ECCCCCEECEEECCCCCEEEEEECCCCCCEEEEEECCCCCEE
T ss_conf 8634663999996057764279999658886048-98-648884335058689986999952258760577504347437
Q ss_pred EEECCCCCCEEEEEECCCCCEEEEEECCC---CEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEC-C
Q ss_conf 77237776314878737875899970589---7999985689588999706776776674008999699899999746-9
Q T0558 88 NIAAPAGCEMQTARILPDGNALVAWCGHP---STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-T 163 (294)
Q Consensus 88 ~~~~~~~~~v~~~~~~~dg~~l~~~s~~~---~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~-d 163 (294)
+... ......+..|+|||+.++..+... .++..+...++... .. ..........++|||+.++..+. +
T Consensus 217 ~lt~-~~~~~~~p~~SPDG~~iaf~~~~~g~~~i~~~~~~~~~~~~-lt------~~~~~~~~p~~spdG~~i~f~s~r~ 288 (415)
T 2hqs_A 217 QVAS-FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VT------DGRSNNTEPTWFPDSQNLAFTSDQA 288 (415)
T ss_dssp EEEC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-CC------CCSSCEEEEEECTTSSEEEEEECTT
T ss_pred EEEC-CCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEE-EE------ECCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 9420-45444432218999855999968898523440232464100-00------0132222662058886378775048
Q ss_pred --CEEEEEECCCCEEEEE-ECCCEEEEEEEECCCCEEEECCCCC---EEEEEECCCCEEEEEECCCCCCCEEECCCCCEE
Q ss_conf --8899993788588985-1697348988734896899735898---799998789859998448876411411345348
Q T0558 164 --SEVREIAPNGQLLNSV-KLSGTPFSSAFLDNGDCLVACGDAH---CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLF 237 (294)
Q Consensus 164 --~~i~~~d~~g~~~~~~-~~~~~~~~~~~~~~g~~~v~~~~~~---~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (294)
..|++.+.++...... .......+...+|+|+.++.....+ .|+++|..++++........ . ..-.
T Consensus 289 G~~~i~~~~~~~~~~~~~t~~~~~~~~~~~Spdg~~i~~~~~~~g~~~I~~~d~~tg~~~~lT~~~~--d------~~Ps 360 (415)
T 2hqs_A 289 GRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFL--D------ETPS 360 (415)
T ss_dssp SSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSS--C------EEEE
T ss_pred CCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCC--C------CCEE
T ss_conf 8425788757776025641146634443227886546889568984799999899998899358998--7------4749
Q ss_pred ECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCEEEEEECC
Q ss_conf 9389989998046771430247775699990899899998358
Q T0558 238 PLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDK 280 (294)
Q Consensus 238 ~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~vW~~~~~ 280 (294)
+.|||+.++.... .+....++.++.+|...=.+...
T Consensus 361 wSPDG~~Iaf~s~-------~~g~~~L~~~~~dg~~~~~Lt~~ 396 (415)
T 2hqs_A 361 LAPNGTMVIYSSS-------QGMGSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp ECTTSSEEEEEEE-------ETTEEEEEEEETTSCCEEECCCS
T ss_pred ECCCCCEEEEEEE-------CCCCCEEEEEECCCCCEEEEECC
T ss_conf 9589999999996-------69983899999999967998669
No 128
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.30 E-value=3.9e-08 Score=74.81 Aligned_cols=214 Identities=13% Similarity=0.146 Sum_probs=136.1
Q ss_pred CCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECC---CCEEEEECCCC
Q ss_conf 998731164790798399841--8828997526770367723777631487873787589997058---97999985689
Q T0558 52 EKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGH---PSTILEVNMKG 126 (294)
Q Consensus 52 ~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~---~~~~~~~~~~G 126 (294)
..+.....++|.++|++++++ .+.++.++.+++...............+++.+||+.+++...+ ...++.....+
T Consensus 42 ~~~~~lEGp~~D~~G~Ly~vD~~~g~I~r~~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~ 121 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred CCCCCCCCCEECCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCC
T ss_conf 79967279979899989999779999999989999699998389997227999999999999479962122178752899
Q ss_pred CEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEC------CCEEEEEECCCCEEEEE-ECCCEEEEEEEECCCCE-EE
Q ss_conf 588999706776776674008999699899999746------98899993788588985-16973489887348968-99
Q T0558 127 EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA------TSEVREIAPNGQLLNSV-KLSGTPFSSAFLDNGDC-LV 198 (294)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~------d~~i~~~d~~g~~~~~~-~~~~~~~~~~~~~~g~~-~v 198 (294)
..+...... .......+.+.+.++|++.++... .+.++.++.+++.+... .....|..+.++++|+. ++
T Consensus 122 ~~~~~~~~~---~~~~~~~nd~~~d~~G~l~~td~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~pNGia~spdg~~lyv 198 (333)
T 2dg1_A 122 DNLQDIIED---LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWV 198 (333)
T ss_dssp CSCEEEECS---SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEE
T ss_pred CEEEEECCC---CCCCCCCCCEEEECCCCEEEECCCCCEECCCCCEEEECCCCCEEEEECCCCCCCCCEEECCCCCCEEE
T ss_conf 625543168---87655776446742577122103761104888247863654312441044440000000112332054
Q ss_pred ECCCCCEEEEEECC-CCEEEEEECCCCCCC-EEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCEEEE
Q ss_conf 73589879999878-985999844887641-1411345348938998999804677143024777569999089989999
Q T0558 199 ACGDAHCFVQLNLE-SNRIVRRVNANDIEG-VQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQ 276 (294)
Q Consensus 199 ~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~vW~ 276 (294)
+.+..+.|+.++.. .+...+......... .....+-++.+.++|++++..+.. .++..++++|+++=.
T Consensus 199 ~dt~~~~I~~~~~~~dg~~~~~~~~~~~~~~~~~~~PDGlavD~dGnL~Va~~~~----------g~V~~~~p~G~~l~~ 268 (333)
T 2dg1_A 199 TETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ----------GRVLVFNKRGYPIGQ 268 (333)
T ss_dssp EEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT----------TEEEEECTTSCEEEE
T ss_pred ECCCCCCEEEEEECCCCCEECCCCCCEEEECCCCCCCEECCCCCCCCEEEEECCC----------CEEEEECCCCCEEEE
T ss_conf 0157891489997589846213464101102675333024498998999986049----------989999799979899
Q ss_pred EE
Q ss_conf 83
Q T0558 277 LN 278 (294)
Q Consensus 277 ~~ 278 (294)
+.
T Consensus 269 i~ 270 (333)
T 2dg1_A 269 IL 270 (333)
T ss_dssp EE
T ss_pred EE
T ss_conf 96
No 129
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.29 E-value=1.2e-07 Score=71.29 Aligned_cols=197 Identities=13% Similarity=0.178 Sum_probs=119.5
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCC----------CCEEEEECCCCEEEE-ECCEEEEEECC-CCCEEEEE
Q ss_conf 8589997479869999887882999994499873----------116479079839984-18828997526-77036772
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE----------CNSVAATKAGEILFS-YSKGAKMITRD-GRELWNIA 90 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~----------~~~~~~~pdG~~l~s-~~~~v~~~~~~-~~~~~~~~ 90 (294)
+..+..++.++.|+++|.+|||++|+|....... ...+++. ++++++. .++.++.+|.. |+.+|+..
T Consensus 77 ~g~vyv~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~~~rgva~~-~g~v~~~t~dg~l~ALDa~TG~~~W~~~ 155 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE-CCEEEEEECCCEEEEEECCCCCCCCCCC
T ss_conf 999999689995999968999867784687776544334667676652476-8859999389849999576775011237
Q ss_pred CCCCCC----EEEEEECCCCCEEEEEEC------CCCEEEEECCCCCEEEEEECCCCCCCCC------------------
Q ss_conf 377763----148787378758999705------8979999856895889997067767766------------------
Q T0558 91 APAGCE----MQTARILPDGNALVAWCG------HPSTILEVNMKGEVLSKTEFETGIERPH------------------ 142 (294)
Q Consensus 91 ~~~~~~----v~~~~~~~dg~~l~~~s~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~------------------ 142 (294)
...... +.+.....++ .++.+.. .+.+..++..+|+.+|++..........
T Consensus 156 ~~~~~~~~~~~t~~p~v~~~-~ViiG~~~~~~~~~G~v~A~D~~TGe~~W~~~t~~~~~~~~~~~~~~~~~~~tw~~~~~ 234 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp TTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred CCCCCCCCCEECCCCEEECC-CEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 75676663113027769767-17306655444666608999888895767884024567767776433223322388876
Q ss_pred --------CCCCEEEECCCCCEEEEEEC-------------------CCEEEEEEC-CCCEEEEEECC----------CE
Q ss_conf --------74008999699899999746-------------------988999937-88588985169----------73
Q T0558 143 --------AQFRQINKNKKGNYLVPLFA-------------------TSEVREIAP-NGQLLNSVKLS----------GT 184 (294)
Q Consensus 143 --------~~~~~~~~s~dG~~i~~g~~-------------------d~~i~~~d~-~g~~~~~~~~~----------~~ 184 (294)
.......+.++-..++.+.. ...+..+|. +|+..|..+.. ..
T Consensus 235 ~~~~~gGg~vW~~~s~D~~~g~~y~~tg~~~~~~~~~~~~~~Gdn~~s~sivAld~~tG~~~W~~Q~t~~D~wd~~~~~~ 314 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred EEEECCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 25736987532430174234817743688886667656786665556412799715788367753247874213422011
Q ss_pred EEEEEEECCC---CEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 4898873489---689973589879999878985999844
Q T0558 185 PFSSAFLDNG---DCLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 185 ~~~~~~~~~g---~~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
+.-.....+| ..++....++.++.+|.++|+++|...
T Consensus 315 ~~l~~~~~~G~~~~vv~~~~k~G~~y~lDr~TGe~l~~~~ 354 (677)
T 1kb0_A 315 MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EEECCEEECCCEEEEEEEECCCCCEEEEECCCCCCCCCCC
T ss_conf 2402223069545777850457707998768894301003
No 130
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.28 E-value=4e-09 Score=82.06 Aligned_cols=237 Identities=14% Similarity=0.105 Sum_probs=150.1
Q ss_pred CCCEEEEEEE-CCCCCCCCEEEEECCCCEEEEEC---CEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 7882999994-49987311647907983998418---8289975267703677237776314878737875899970589
Q T0558 41 DTKEIVWEYP-LEKGWECNSVAATKAGEILFSYS---KGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHP 116 (294)
Q Consensus 41 ~tg~~~w~~~-~~~~~~~~~~~~~pdG~~l~s~~---~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~ 116 (294)
++|+.+..+. .+....++.+++++||+++++.+ +.+..++..+...+............+++.++|+++++...+.
T Consensus 9 ~~g~~~~~~~g~~~~~~P~~va~d~dG~iyv~~~~~~~~i~~~~~~~~~~~~~~~~~~~~P~gia~~~~g~i~v~d~~~~ 88 (270)
T 1rwi_B 9 ASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNR 88 (270)
T ss_dssp ---CEECCCCSCSSCCCEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTE
T ss_pred CCCCEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEECC
T ss_conf 89964821035789776678999599999999618988899999999569974369877841899818888887631011
Q ss_pred CEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEC--CCEEEEEEEECCC
Q ss_conf 79999856895889997067767766740089996998999997469889999378858898516--9734898873489
Q T0558 117 STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKL--SGTPFSSAFLDNG 194 (294)
Q Consensus 117 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~~~~~~--~~~~~~~~~~~~g 194 (294)
.+.+....++... ... ........+++.++|+++++......+..++..++..+.... ...|..+.+.++|
T Consensus 89 ~v~~~~~~~~~~~--~~~-----~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~p~~i~~d~~g 161 (270)
T 1rwi_B 89 VVTLAAGSNNQTV--LPF-----DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSG 161 (270)
T ss_dssp EEEECTTCSCCEE--CCC-----CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTC
T ss_pred CCCCCCCCCCCCC--EEC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCC
T ss_conf 1111111110000--000-----111222100011123331111010000111122110110101587630168874899
Q ss_pred CEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECC----------C---CCC
Q ss_conf 689973589879999878985999844887641141134534893899899980467714302----------4---777
Q T0558 195 DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAG----------K---GKH 261 (294)
Q Consensus 195 ~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~----------~---~~~ 261 (294)
+++++...+++|..++..++........ .+..+.++.+.++|++++..+..+.+... . ...
T Consensus 162 ~l~v~~~~~~~i~~~~~~g~~~~~~~~~------~~~~P~gi~~d~~G~lyv~d~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (270)
T 1rwi_B 162 NVYVTDTDNNRVVKLEAESNNQVVLPFT------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNT 235 (270)
T ss_dssp CEEEEEGGGTEEEEECTTTCCEEECCCS------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSC
T ss_pred CEEEEECCCCEEEEECCCCCEEEEEECC------CCCCCCEEEEECCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCC
T ss_conf 5765311210124302431101222023------3578720001002211254238998999959998799970699898
Q ss_pred CEEEEECCCCCEEEEEECCCCEEEEEEEE
Q ss_conf 56999908998999983588537888621
Q T0558 262 PQLVEIDSEGKVVWQLNDKVKFGMISTIC 290 (294)
Q Consensus 262 ~~~~~i~~~G~~vW~~~~~~~~~~i~~~~ 290 (294)
+.-++++++|++.+.=..+.++.++.++.
T Consensus 236 P~gia~d~dg~lyVad~~~~~I~~~t~~~ 264 (270)
T 1rwi_B 236 PLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred EEEEEECCCCCEEEEECCCCEEEEEECCC
T ss_conf 27999908999999989999999997952
No 131
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.27 E-value=1.1e-07 Score=71.56 Aligned_cols=243 Identities=14% Similarity=0.099 Sum_probs=140.5
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEECCCCC---CCCEEEEECCCCEEEEE-------CCEEEEEEC-CCCCEEEEE
Q ss_conf 8858999747986999988788299999449987---31164790798399841-------882899752-677036772
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGW---ECNSVAATKAGEILFSY-------SKGAKMITR-DGRELWNIA 90 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~---~~~~~~~~pdG~~l~s~-------~~~v~~~~~-~~~~~~~~~ 90 (294)
...+++.++.+++|+++|..|||++|++...... .+.....--++.+++.. .+.+..+|. +|+++|++.
T Consensus 120 ~~~~v~~~t~dg~l~AlDa~TG~~~W~~~~~d~~~~~~~t~~P~i~~~~vivG~~~~e~~~~G~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 120 TPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp SCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEEECCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEE
T ss_conf 87499998079876864265673102321235555642235880776778996303543225733998768882888875
Q ss_pred CCC------------------------------------CCCE-EEEEECCCCCEEEEEECCC----------------C
Q ss_conf 377------------------------------------7631-4878737875899970589----------------7
Q T0558 91 APA------------------------------------GCEM-QTARILPDGNALVAWCGHP----------------S 117 (294)
Q Consensus 91 ~~~------------------------------------~~~v-~~~~~~~dg~~l~~~s~~~----------------~ 117 (294)
... ...+ ..+++.++.+.++.+..+. .
T Consensus 200 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~~~w~~~s~D~~~~~vy~~tg~~~~~~~~~r~gdn~~s~s 279 (599)
T 1w6s_A 200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (599)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCC
T ss_conf 35887665555444545655565555667666772133787433561115678845641334577531000464434354
Q ss_pred EEEEECCCCCEEEEEECCCCCCC---CCCCCCEEE-ECCCCC---EEEEEECCCEEEEEEC-CCCEEEEEECCCE-----
Q ss_conf 99998568958899970677677---667400899-969989---9999746988999937-8858898516973-----
Q T0558 118 TILEVNMKGEVLSKTEFETGIER---PHAQFRQIN-KNKKGN---YLVPLFATSEVREIAP-NGQLLNSVKLSGT----- 184 (294)
Q Consensus 118 ~~~~~~~~G~~~~~~~~~~~~~~---~~~~~~~~~-~s~dG~---~i~~g~~d~~i~~~d~-~g~~~~~~~~~~~----- 184 (294)
++.++..+|+.+|.++....-.- .......+. ...+|+ .++....++.++++|+ +|+.+|.......
T Consensus 280 ivAlD~~TG~~~W~~q~~~~D~wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~yvlDr~tG~li~~~~~~~~~~~~~ 359 (599)
T 1w6s_A 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred CEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCC
T ss_conf 12124355200343111246654456743116642013344564047742775217995157883444101466666555
Q ss_pred --------E---------------------------EEEEEECCCCEEEECC----------------------------
Q ss_conf --------4---------------------------8988734896899735----------------------------
Q T0558 185 --------P---------------------------FSSAFLDNGDCLVACG---------------------------- 201 (294)
Q Consensus 185 --------~---------------------------~~~~~~~~g~~~v~~~---------------------------- 201 (294)
+ ....+.|+...++...
T Consensus 360 ~~d~~tg~pv~~~~~~~~~~~~~~~i~p~~~Gg~nw~~~a~~p~~~~~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 42212443211730023567765468404523235677565777764864352355335531135544664323312111
Q ss_pred -----------CCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECC-
Q ss_conf -----------89879999878985999844887641141134534893899899980467714302477756999908-
Q T0558 202 -----------DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS- 269 (294)
Q Consensus 202 -----------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~- 269 (294)
.-+.+..+|..+|+++|+...... ..++...++.|-+++. ..++.+.++|.
T Consensus 440 ~~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~~~~------~~gg~lsTagglVF~G-----------~~dg~l~A~Da~ 502 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA------VWGGTMATAGDLVFYG-----------TLDGYLKARDSD 502 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC------CCSBCEEETTTEEEEE-----------CTTSEEEEEETT
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCC------CCCCEEEECCCEEEEE-----------CCCCEEEEEECC
T ss_conf 47666744578744389882788746134168888------7553368679879997-----------889949999899
Q ss_pred CCCEEEEEECCC
Q ss_conf 998999983588
Q T0558 270 EGKVVWQLNDKV 281 (294)
Q Consensus 270 ~G~~vW~~~~~~ 281 (294)
+|++||+++-..
T Consensus 503 tGe~LW~~~~~~ 514 (599)
T 1w6s_A 503 TGDLLWKFKIPS 514 (599)
T ss_dssp TCCEEEEEECSS
T ss_pred CCCEEEEEECCC
T ss_conf 881725998999
No 132
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.27 E-value=2e-07 Score=69.63 Aligned_cols=198 Identities=11% Similarity=0.136 Sum_probs=120.9
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCC----------CCEEEEECCCCEEE-EECCEEEEEEC-CCCCEEEEE
Q ss_conf 8589997479869999887882999994499873----------11647907983998-41882899752-677036772
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE----------CNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIA 90 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~----------~~~~~~~pdG~~l~-s~~~~v~~~~~-~~~~~~~~~ 90 (294)
+..+..++.+++|+++|.+|||++|+|....... ...+++. ++++++ +.|+.++.+|. +|+.+|+..
T Consensus 70 ~g~vyv~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~~~rg~a~~-~~~v~~~~~dg~l~aLDa~TG~~~W~~~ 148 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE-CCEEEEEECCCEEEEEECCCCCEEEEEC
T ss_conf 999999689997999847999888887788775445643456777761575-8968999689818999934697601236
Q ss_pred CCCC-CC--EEEEEECCCCCEEEEEEC------CCCEEEEECCCCCEEEEEECCCCCCCC--------------------
Q ss_conf 3777-63--148787378758999705------897999985689588999706776776--------------------
Q T0558 91 APAG-CE--MQTARILPDGNALVAWCG------HPSTILEVNMKGEVLSKTEFETGIERP-------------------- 141 (294)
Q Consensus 91 ~~~~-~~--v~~~~~~~dg~~l~~~s~------~~~~~~~~~~~G~~~~~~~~~~~~~~~-------------------- 141 (294)
.... .. ....++..-++.++.+.. .+.+..++..+|+.+|++.........
T Consensus 149 ~~~~~~~~~~~t~~p~v~~~~viig~~~~~~~~~G~v~A~D~~TG~~~W~~~t~p~~~~~~~~~~~~~~~~~tw~~~~~~ 228 (689)
T 1yiq_A 149 TRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYV 228 (689)
T ss_dssp CCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHH
T ss_pred CCCCCCCCEEECCCCEEECCEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 86542144353254147767699257765446653189998899968552203456655576554322244445666531
Q ss_pred -----CCCCCEEEECCCCCEEEEEEC-------------------CCEEEEEEC-CCCEEEEEECC----------CEEE
Q ss_conf -----674008999699899999746-------------------988999937-88588985169----------7348
Q T0558 142 -----HAQFRQINKNKKGNYLVPLFA-------------------TSEVREIAP-NGQLLNSVKLS----------GTPF 186 (294)
Q Consensus 142 -----~~~~~~~~~s~dG~~i~~g~~-------------------d~~i~~~d~-~g~~~~~~~~~----------~~~~ 186 (294)
........+.++-.+++.+.. ...|..+|. +|+.+|.++.. ..+.
T Consensus 229 ~~~ggg~vW~~~s~D~~~glvy~gtgn~~p~~~~~~~~~~gdnly~~SivAlD~~TG~~~W~~q~t~~D~Wd~d~~~~~~ 308 (689)
T 1yiq_A 229 EQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMI 308 (689)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred EECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCEEE
T ss_conf 11476542344421203585132355666653345665675454654126423677644554213672001466422133
Q ss_pred EEEEECCCC---EEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 988734896---89973589879999878985999844
Q T0558 187 SSAFLDNGD---CLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 187 ~~~~~~~g~---~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
-.....+|+ .++....++.++++|..+|++++...
T Consensus 309 l~d~~~~g~~~~vv~~~~k~G~~yvlDr~tGe~i~~~~ 346 (689)
T 1yiq_A 309 LAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred ECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC
T ss_conf 02444578525777624767507885024586433343
No 133
>2p4o_A Hypothetical protein; ZP_00111901.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.90A {Nostoc punctiforme pcc 73102} SCOP: b.68.6.3
Probab=99.25 E-value=6.7e-08 Score=73.09 Aligned_cols=126 Identities=13% Similarity=0.118 Sum_probs=58.1
Q ss_pred CCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCE
Q ss_conf 78829999944998731164790798399841--8828997526770367723777631487873787589997058979
Q T0558 41 DTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPST 118 (294)
Q Consensus 41 ~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~ 118 (294)
+..+++.+++.+ .-+..+++.|||+++++. .+.++.++..++..... .....+..+++.+||+++++...+..+
T Consensus 20 ~~~~~~~~~P~~--~~~e~iAv~pDG~l~vt~~~~~~I~~i~p~g~~~~~~--~~~~~~~gla~~~dG~l~v~~~~~~~~ 95 (306)
T 2p4o_A 20 APAKIITSFPVN--TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHA--TVEGKVSGLAFTSNGDLVATGWNADSI 95 (306)
T ss_dssp CCEEEEEEECTT--CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE--ECSSEEEEEEECTTSCEEEEEECTTSC
T ss_pred CCCCEEEECCCC--CCCCCEEECCCCCEEEEECCCCEEEEECCCCCEEEEE--CCCCCCCEEEECCCCCEEEEECCCCEE
T ss_conf 974389989999--8816868999987999978999799996999679986--679986447998899899998389838
Q ss_pred EEEE--CCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCE
Q ss_conf 9998--56895889997067767766740089996998999997469889999378858
Q T0558 119 ILEV--NMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQL 175 (294)
Q Consensus 119 ~~~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~ 175 (294)
..++ ..+++........ .....+.+.+.++|+++++.+..+.+..++..+..
T Consensus 96 ~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~g~~~~~d~~~g~~~~~~~~~~~ 149 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLP-----DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EEEEEECTTSCEEEEEECT-----TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEECCCCCCEEEEEECCC-----CCCCCCCEEECCCCCEEEECCCCCCEEEEECCCCC
T ss_conf 8885133321035663034-----45777730699999888521578814667607982
No 134
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoreductase; HET: PQQ; 1.50A {Methylophilus methylotrophus W3A1} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.25 E-value=9.8e-09 Score=79.19 Aligned_cols=243 Identities=13% Similarity=0.079 Sum_probs=148.0
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCC---CCCCEEEEECCCCEEEEE-------CCEEEEEEC-CCCCEEEEEC
Q ss_conf 85899974798699998878829999944998---731164790798399841-------882899752-6770367723
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG---WECNSVAATKAGEILFSY-------SKGAKMITR-DGRELWNIAA 91 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~---~~~~~~~~~pdG~~l~s~-------~~~v~~~~~-~~~~~~~~~~ 91 (294)
+..++.++.+++++++|.+|||++|++.+... ..+.+...-.++.+++.. .+.++.+|. +|+++|++..
T Consensus 115 ~~~v~~~~~dg~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~v~vg~~~~~~~~~G~v~a~D~~tG~~~W~~~t 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEECCCCEEEEEHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEC
T ss_conf 88699980797578110233333114455665566304416734698588840013446677489997889857889604
Q ss_pred CCCC------------------------------------CE-EEEEECCCCCEEEEEEC----------------CCCE
Q ss_conf 7776------------------------------------31-48787378758999705----------------8979
Q T0558 92 PAGC------------------------------------EM-QTARILPDGNALVAWCG----------------HPST 118 (294)
Q Consensus 92 ~~~~------------------------------------~v-~~~~~~~dg~~l~~~s~----------------~~~~ 118 (294)
.... .+ ...++.++.+.++.+.. ...+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~W~~~s~D~~~~l~y~~tg~~~p~~~~~r~g~n~~s~sv 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCCCCCCCCCCCCCCE
T ss_conf 78633455665545444455643446656777631327874114621354208555531345665213456422466533
Q ss_pred EEEECCCCCEEEEEECCCCCCCC---CCCCCEEEECCCCC---EEEEEECCCEEEEEECC-CCEEEEEECCC--------
Q ss_conf 99985689588999706776776---67400899969989---99997469889999378-85889851697--------
Q T0558 119 ILEVNMKGEVLSKTEFETGIERP---HAQFRQINKNKKGN---YLVPLFATSEVREIAPN-GQLLNSVKLSG-------- 183 (294)
Q Consensus 119 ~~~~~~~G~~~~~~~~~~~~~~~---~~~~~~~~~s~dG~---~i~~g~~d~~i~~~d~~-g~~~~~~~~~~-------- 183 (294)
+..+..+|+++|.++....-.-. ...........+|+ .++....+|.++++|++ |+.+|......
T Consensus 275 vAlD~~TG~~~W~~q~~~~D~wd~d~~~~~~l~~~~~~G~~~~~v~~~~k~G~l~~lDr~tG~~i~~~~~~~~~~~~~~~ 354 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKV 354 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EEEECCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCC
T ss_conf 55422551111012357743324556645136765205766541364166654999846898476554367753233456
Q ss_pred -----EE---------------------------EEEEEECCCCEEEECC------------------------------
Q ss_conf -----34---------------------------8988734896899735------------------------------
Q T0558 184 -----TP---------------------------FSSAFLDNGDCLVACG------------------------------ 201 (294)
Q Consensus 184 -----~~---------------------------~~~~~~~~g~~~v~~~------------------------------ 201 (294)
.+ ...++.|+.+.++...
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~wg~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 434 (571)
T 2ad6_A 355 DLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPG 434 (571)
T ss_dssp CTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCEECCC
T ss_conf 64445211265444566665367861122354566410177754377422543422432421466775310563022256
Q ss_pred -------CCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECC-CCCE
Q ss_conf -------89879999878985999844887641141134534893899899980467714302477756999908-9989
Q T0558 202 -------DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS-EGKV 273 (294)
Q Consensus 202 -------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~-~G~~ 273 (294)
.-+.+..+|.+||+++|+..... ....+...+++|-+++. ..++.+.++|. +|++
T Consensus 435 ~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~------~~~~g~l~TagglVf~G-----------~~dg~l~A~Da~tGe~ 497 (571)
T 2ad6_A 435 PNGPTKKEMGQIRAFDLTTGKAKWTKWEKF------AAWGGTLYTKGGLVWYA-----------TLDGYLKALDNKDGKE 497 (571)
T ss_dssp TTSTTSCCCEEEEEECTTTCCEEEEEEESS------CCCSBCEEETTTEEEEE-----------CTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCCCEEEECCCCCCEEEECCCCC------CCCCCEEEECCCEEEEE-----------CCCCEEEEEECCCCCE
T ss_conf 566776765616873367785642667899------98755149669879997-----------8999699999999868
Q ss_pred EEEEECCCC
Q ss_conf 999835885
Q T0558 274 VWQLNDKVK 282 (294)
Q Consensus 274 vW~~~~~~~ 282 (294)
||+++-...
T Consensus 498 LW~~~l~~~ 506 (571)
T 2ad6_A 498 LWNFKMPSG 506 (571)
T ss_dssp EEEEECSSC
T ss_pred EEEEECCCC
T ss_conf 579989999
No 135
>3fgb_A Uncharacterized protein Q89ZH8_bactn; BTR289B, NESG, structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.25 E-value=1.9e-07 Score=69.83 Aligned_cols=252 Identities=13% Similarity=0.126 Sum_probs=123.3
Q ss_pred CEEEEEC----CCCEEEE--EECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE----C--CE--EEEEECCCCCEEEE
Q ss_conf 5899974----7986999--98878829999944998731164790798399841----8--82--89975267703677
Q T0558 24 HLLVGGS----GWNKIAI--INKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY----S--KG--AKMITRDGRELWNI 89 (294)
Q Consensus 24 ~~l~~gs----~~~~i~~--~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~----~--~~--v~~~~~~~~~~~~~ 89 (294)
--|+.|+ ..+.|++ +|.++|++.-....+ ...++.++++|||++|+.. + +. ++.++.+++.+...
T Consensus 6 ~~~~~gtyt~~~~~gi~~~~~d~~~g~~~~~~~~~-~~~P~~la~SpDG~~lYv~~~~~~~~~~v~v~~id~~~g~~~~~ 84 (361)
T 3fgb_A 6 LTMIVGTYTSGDSKGLYSFRFNEENGTATALSEAE-VENPSYLVPSADGKFIYAVSEFSNEQAAANAFAFNKEEGTFRLL 84 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEECTTTCCEEEEEEEE-CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred EEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEE-CCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEE
T ss_conf 89999936599999699999989999399954587-58998799979949999998358988549999997999939997
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCC-EEEEEC-CCCCEEE---EEECC----CCCCCCCCCCCEEEECCCCCEEEEE
Q ss_conf 2377763148787378758999705897-999985-6895889---99706----7767766740089996998999997
Q T0558 90 AAPAGCEMQTARILPDGNALVAWCGHPS-TILEVN-MKGEVLS---KTEFE----TGIERPHAQFRQINKNKKGNYLVPL 160 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s~~~~-~~~~~~-~~G~~~~---~~~~~----~~~~~~~~~~~~~~~s~dG~~i~~g 160 (294)
..........+.+++|++.+++.+.+.. +.++.. .+|.... ..... ............+.++|+|+++++.
T Consensus 85 ~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~s~~g~~l~v~ 164 (361)
T 3fgb_A 85 NTQKTGGEDPCYIITNGSNVVTANYSGGSISVFPIDKDGSLLPASEVVKFKGSGADKERQEKPHLHCVRITPDGKYLFAD 164 (361)
T ss_dssp EEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCCEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE
T ss_pred EECCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEE
T ss_conf 66256799858997289957997658987999980467841366777650577776455689954399987999989998
Q ss_pred E-CCCEEEEEECCCCE---------------EEEEECCCEEEEEEEECCCCEE-EECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 4-69889999378858---------------8985169734898873489689-97358987999987898599984488
Q T0558 161 F-ATSEVREIAPNGQL---------------LNSVKLSGTPFSSAFLDNGDCL-VACGDAHCFVQLNLESNRIVRRVNAN 223 (294)
Q Consensus 161 ~-~d~~i~~~d~~g~~---------------~~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~i~~~d~~~g~~~~~~~~~ 223 (294)
. .+..+++++..... .........|....+.+++..+ ++...++.+.+++..+..........
T Consensus 165 ~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~ 244 (361)
T 3fgb_A 165 DLGTDQIHKFIVNPNAKADNEDVFLKEGSPASYKVEAGSGPRHLTFAPNGSYAYLINELSGTVIAFEYNDGELKEIQTIA 244 (361)
T ss_dssp ETTTTEEEEEEECTTCCTTSCCCSEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE
T ss_pred ECCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEECC
T ss_conf 73898299998318876000000025677512875889998799993289826999468870689982388505755214
Q ss_pred CCCCEEECCCCCEEECCCCCE-EEEECCCCE-------------E----ECCCCCCCEEEEECCCCCEEEEE
Q ss_conf 764114113453489389989-998046771-------------4----30247775699990899899998
Q T0558 224 DIEGVQLFFVAQLFPLQNGGL-YICNWQGHD-------------R----EAGKGKHPQLVEIDSEGKVVWQL 277 (294)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~G~i-~i~~~~~~~-------------~----~~~~~~~~~~~~i~~~G~~vW~~ 277 (294)
.. .........+.+.+||+. ++.+..... . ....+..++-+++++||+.++-.
T Consensus 245 ~~-~~~~~~~~~i~~spDG~~l~va~~~~~~~~~v~~~~~~t~~~~~~~~~~~G~~p~~ia~spDG~~lyva 315 (361)
T 3fgb_A 245 AD-TVGAKGSGDIHISPDGKFLYASNRLKADGLAIFSIHPENGMLTKVGYQLTGIHPRNFIITPNGKYLLVA 315 (361)
T ss_dssp SC-CSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEE
T ss_pred CC-CCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCEEEEE
T ss_conf 46-788857459999489999999577789826899992899879994760689967589993799999999
No 136
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.24 E-value=1.1e-07 Score=71.56 Aligned_cols=68 Identities=12% Similarity=0.223 Sum_probs=35.5
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCC----CCCEEEEECCCCEEEEE-------CCEEEEEECC-CCCEEEEE
Q ss_conf 858999747986999988788299999449987----31164790798399841-------8828997526-77036772
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGW----ECNSVAATKAGEILFSY-------SKGAKMITRD-GRELWNIA 90 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~----~~~~~~~~pdG~~l~s~-------~~~v~~~~~~-~~~~~~~~ 90 (294)
+..++.+..+++++++|.+|||++|++.+.... ........-++.+++.. .+.+..+|.. |+++|++.
T Consensus 121 ~~~v~~~~~dg~l~aLDa~TG~~~W~~~~~~~~~~~~~~t~~p~v~~~~viig~~~~~~~~~G~v~A~D~~TG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCEEECCCCEEECCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEC
T ss_conf 89689996898189999346976012368654214435325414776769925776544665318999889996855220
No 137
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.23 E-value=2.1e-09 Score=84.08 Aligned_cols=205 Identities=13% Similarity=0.041 Sum_probs=127.0
Q ss_pred HCCCCCCCCEE-EEECCCCEEEEEECCCCEEEEEEECCCC-----CCCCEEEEECCCCEEEEE--------------CCE
Q ss_conf 00147888589-9974798699998878829999944998-----731164790798399841--------------882
Q T0558 16 FAQGSSPQHLL-VGGSGWNKIAIINKDTKEIVWEYPLEKG-----WECNSVAATKAGEILFSY--------------SKG 75 (294)
Q Consensus 16 ~~~~s~~~~~l-~~gs~~~~i~~~d~~tg~~~w~~~~~~~-----~~~~~~~~~pdG~~l~s~--------------~~~ 75 (294)
-++.|++++.| ++++.++.|.+||..+++.+........ ..+..++++|||+.++.. +..
T Consensus 47 ~v~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~ 126 (349)
T 1jmx_B 47 TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 126 (349)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred EEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCE
T ss_conf 79998898999999899996999966677178765127876533667448999728987999825887404650468835
Q ss_pred EEEEECCCCCEEEE-ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCC-----------------
Q ss_conf 89975267703677-237776314878737875899970589799998568958899970677-----------------
Q T0558 76 AKMITRDGRELWNI-AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETG----------------- 137 (294)
Q Consensus 76 v~~~~~~~~~~~~~-~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~----------------- 137 (294)
+.+++.......+. ..........+...+++..++.. +.....++..+++.+..+.....
T Consensus 127 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (349)
T 1jmx_B 127 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA--GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQ 204 (349)
T ss_dssp EEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE--SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCC
T ss_pred EEEEECCCCCEEEEEEECCCCCCEEEEECCCEEEEEEE--CCCCEEEECCCCCEEEEEECCCCCCCEEECCCCCEEEEEE
T ss_conf 89897678959689871568970699706880499980--5740222468884999996589743058666524146640
Q ss_pred ---------------------------------------------CCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC
Q ss_conf ---------------------------------------------67766740089996998999997469889999378
Q T0558 138 ---------------------------------------------IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 172 (294)
Q Consensus 138 ---------------------------------------------~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~ 172 (294)
...+......+..++++.+++.+. ++.+++||.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~ 283 (349)
T 1jmx_B 205 SPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLK 283 (349)
T ss_dssp CTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETT
T ss_pred CCCCCEEEEECCEEECCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEC-CCEEEEEECC
T ss_conf 588815765000000477502564057851799970678445664048755136778618998899931-8989999999
Q ss_pred -CCEEEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf -858898516973489887348968997358987999987898599984488
Q T0558 173 -GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 223 (294)
Q Consensus 173 -g~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~ 223 (294)
++.+.....+..+.++.+++||+++++++.++.+.+||.++++.+.++...
T Consensus 284 t~~~~~~~~~~~~~~~va~S~DG~~l~v~~~dg~v~v~D~~t~~~v~~i~~p 335 (349)
T 1jmx_B 284 QRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp TTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECC
T ss_conf 9959999748998889999679999999908993999999879699999889
No 138
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.22 E-value=3.4e-07 Score=67.95 Aligned_cols=185 Identities=14% Similarity=0.120 Sum_probs=69.9
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEE
Q ss_conf 8885899974798699998878829999944998731164790798399841--88289975267703677237776314
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQ 98 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~ 98 (294)
+++.++++....+.|..++.+++...+..+ .....++.+++.+||+++++. .+.+..++.++.............+.
T Consensus 71 ~~G~iw~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~d~dG~iwv~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 149 (300)
T 2qc5_A 71 SLGDIWFTENGANKIGKLSKKGGFTEYPLP-QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPA 149 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTTSCEEEEECS-STTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE
T ss_pred CCCCEEEEECCCCEEEEEECCCCEEECCCC-CCCCCCEEEEEECCCCEEEEECCEEEEECCCCCCCEEEEECCCCCCCCC
T ss_conf 999999994688302100011210001332-3335633599954675787531201220024332200000146544651
Q ss_pred EEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEEE
Q ss_conf 87873787589997058979999856895889997067767766740089996998999997469889999378858898
Q T0558 99 TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNS 178 (294)
Q Consensus 99 ~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~~~ 178 (294)
.+.+.++|++.++.... ..+.....+++.. .+.... .......+...+||.+.++....+.+..++.+++....
T Consensus 150 ~i~~d~dg~lwv~~~~~-~~i~~~~~~~~~~-~~~~~~----~~~~~~~i~~d~~G~iwv~~~~~~~i~~~~~~g~~~~~ 223 (300)
T 2qc5_A 150 FITLGSDNALWFTENQN-NSIGRITNTGKLE-EYPLPT----NAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEY 223 (300)
T ss_dssp EEEECTTSSEEEEETTT-TEEEEECTTCCEE-EEECSS----TTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEE
T ss_pred EEEEECCCEEEEECCCC-CEEEEEEEECCEE-EEEEEE----CCCCCCEEECCCCCCEEEECCCCCEEEEEEECCCCEEE
T ss_conf 58972143079950452-1146751000014-665410----35665132136443126402559879999845851689
Q ss_pred -E-ECCCEEEEEEEECCCCEEEECCCCCEEEEEECC
Q ss_conf -5-169734898873489689973589879999878
Q T0558 179 -V-KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 212 (294)
Q Consensus 179 -~-~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~ 212 (294)
. .....+.++.+.++|+++++...++.+..++..
T Consensus 224 ~~~~~~~~~~~i~~d~~g~lwv~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 224 DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EECCCCCCCCCEEECCCCEEEEEECCCCEEEEECCC
T ss_conf 504564200126898999699997589969999199
No 139
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.21 E-value=1.3e-07 Score=70.90 Aligned_cols=143 Identities=10% Similarity=-0.015 Sum_probs=81.8
Q ss_pred HHCCCCCCCCEEEEEC----------CCCEEEEEECCCCEEEEEEECCC------CCCCCEEEEECCCCEEEEE---CCE
Q ss_conf 2001478885899974----------79869999887882999994499------8731164790798399841---882
Q T0558 15 PFAQGSSPQHLLVGGS----------GWNKIAIINKDTKEIVWEYPLEK------GWECNSVAATKAGEILFSY---SKG 75 (294)
Q Consensus 15 ~~~~~s~~~~~l~~gs----------~~~~i~~~d~~tg~~~w~~~~~~------~~~~~~~~~~pdG~~l~s~---~~~ 75 (294)
+..+.+++.+.++..+ .++.|.+||..|++++++.++.. +...+.++++|||+.++.. ++.
T Consensus 68 ~~~~~spdg~~~~~~~~~~~~~~~g~r~~~v~v~D~~t~~~~~~i~~p~~~~~~~~~~~~~~a~SpDG~~l~v~~~~~~~ 147 (368)
T 1mda_H 68 SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA 147 (368)
T ss_dssp CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred CCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCE
T ss_conf 76249899998999942455555578786699777688978778726876500227876765987799989999389997
Q ss_pred EEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC
Q ss_conf 89975267703677237776314878737875899970589799998568958899970677677667400899969989
Q T0558 76 AKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN 155 (294)
Q Consensus 76 v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~ 155 (294)
+..||..+..+........... .+..++..++..+.|+.+.+|....+.........................+++.
T Consensus 148 v~~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~DG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (368)
T 1mda_H 148 AAGLSVPGASDDQLTKSASCFH---IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGM 224 (368)
T ss_dssp EEEEEETTTEEEEEEECSSCCC---CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred EEEEECCCCEEEEEECCCCCCE---EECCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCEE
T ss_conf 9999999993989964897555---8528996189993799889997378705668860242104543468522489958
Q ss_pred EEEEE
Q ss_conf 99997
Q T0558 156 YLVPL 160 (294)
Q Consensus 156 ~i~~g 160 (294)
++.+.
T Consensus 225 ~~~~~ 229 (368)
T 1mda_H 225 LVWAV 229 (368)
T ss_dssp EEECB
T ss_pred EEEEC
T ss_conf 99937
No 140
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, zinc, calcium, lyase, peptide amidation, HG- MAD, Zn-MAD, alternative splicing; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.20 E-value=1.4e-07 Score=70.82 Aligned_cols=220 Identities=13% Similarity=0.111 Sum_probs=133.7
Q ss_pred CCEEEEEECCCCCEEEEE-CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCC-----CCCCCCCC
Q ss_conf 882899752677036772-377763148787378758999705897999985689588999706776-----77667400
Q T0558 73 SKGAKMITRDGRELWNIA-APAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGI-----ERPHAQFR 146 (294)
Q Consensus 73 ~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~-----~~~~~~~~ 146 (294)
+..+..++..+.++++.. .+.-...+.+++.++|++.++......+.. ..++|+........... ........
T Consensus 68 ~~~i~~~d~~~~~~~~~~g~~~~~~p~gi~vd~~G~vyV~D~~~~~V~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~ 146 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFK-LDPHSKEGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEE-ECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred CCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCEEEE-ECCCCCEEEEEEECCCCCCCCCCCCCCCCE
T ss_conf 8868999599997986437985368357998689989997389998999-826642489998345788677768569963
Q ss_pred EEEECCC-CCEEEEEE-CCCEEEEEECCCCEEEEEEC-----------CCEEEEEEEECC-CCEEEECCCCCEEEEEECC
Q ss_conf 8999699-89999974-69889999378858898516-----------973489887348-9689973589879999878
Q T0558 147 QINKNKK-GNYLVPLF-ATSEVREIAPNGQLLNSVKL-----------SGTPFSSAFLDN-GDCLVACGDAHCFVQLNLE 212 (294)
Q Consensus 147 ~~~~s~d-G~~i~~g~-~d~~i~~~d~~g~~~~~~~~-----------~~~~~~~~~~~~-g~~~v~~~~~~~i~~~d~~ 212 (294)
.++++++ |.++++.. ....|..+|.+|+.++.+.. ...|.++++.++ |.++|+...+++|.+++..
T Consensus 147 ~iavd~~~g~iyv~d~~~n~rI~~~d~~G~~~~~~G~~~~~~~~~~g~~~~P~~iai~~~~g~lyVaD~~n~~I~~~~~~ 226 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEECC
T ss_conf 99997999969996477644899975888589831566767777765426750789860598489981799489999689
Q ss_pred CCEEEEEECCCC--CCCEEECCCCCEEECCCCCEEEE----------ECCCCEEE-CCC-----CCCCEEEEECCCCCEE
Q ss_conf 985999844887--64114113453489389989998----------04677143-024-----7775699990899899
Q T0558 213 SNRIVRRVNAND--IEGVQLFFVAQLFPLQNGGLYIC----------NWQGHDRE-AGK-----GKHPQLVEIDSEGKVV 274 (294)
Q Consensus 213 ~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~G~i~i~----------~~~~~~~~-~~~-----~~~~~~~~i~~~G~~v 274 (294)
++..++.+.... ..........++.+.++|++++. +..+.... ... -..+.-+++|++|++
T Consensus 227 ~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~g~~yv~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~giavd~~G~i- 305 (329)
T 3fvz_A 227 TKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTV- 305 (329)
T ss_dssp TCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEE-
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCE-
T ss_conf 9949999712334774323255434778259989998578843999989999699631799986489789999499969-
Q ss_pred EEE-ECCCCEEEEEEEEEECC
Q ss_conf 998-35885378886211049
Q T0558 275 WQL-NDKVKFGMISTICPIRE 294 (294)
Q Consensus 275 W~~-~~~~~~~~i~~~~~~~~ 294 (294)
|-. ..+.++.++.....+-|
T Consensus 306 yVaD~~n~rI~kf~~~~~~~~ 326 (329)
T 3fvz_A 306 YIGDAHTNTVWKFTLTEKMEH 326 (329)
T ss_dssp EEEESSSCCEEEEEEEECSSC
T ss_pred EEEECCCCEEEEEECCCCCEE
T ss_conf 999899999999983797412
No 141
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein/lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.20 E-value=1.4e-07 Score=70.68 Aligned_cols=246 Identities=9% Similarity=0.063 Sum_probs=133.4
Q ss_pred CEEEEEC----CCC----EEEEEECC--CCEEEEEEECC-CCCCCCEE----E------EEC-----CCCEEEEE----C
Q ss_conf 5899974----798----69999887--88299999449-98731164----7------907-----98399841----8
Q T0558 24 HLLVGGS----GWN----KIAIINKD--TKEIVWEYPLE-KGWECNSV----A------ATK-----AGEILFSY----S 73 (294)
Q Consensus 24 ~~l~~gs----~~~----~i~~~d~~--tg~~~w~~~~~-~~~~~~~~----~------~~p-----dG~~l~s~----~ 73 (294)
.+|+.|+ .++ .+++||.. +++++-..... .......+ + ++. +.++.+.. .
T Consensus 76 ~~lv~g~~~~~~~~~~~v~~~l~dv~~~~~~~~~~~~~~~~~~~~r~~aH~~ad~i~~~ltg~~g~f~triafv~~~~~~ 155 (415)
T 2hqs_A 76 DAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGG 155 (415)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSS
T ss_pred CEEEEEEEEECCCCCEEEEEEEEEECCCCCEECCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
T ss_conf 88999999986898589999999831552001024056337406667777776788775306886346639999960577
Q ss_pred C---EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCC---CEEEEECCCCCEEEEEECCCCCCCCCCCCCE
Q ss_conf 8---289975267703677237776314878737875899970589---7999985689588999706776776674008
Q T0558 74 K---GAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHP---STILEVNMKGEVLSKTEFETGIERPHAQFRQ 147 (294)
Q Consensus 74 ~---~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~---~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 147 (294)
. .+++.|.++........ +.......+|+|||+.++..+... .+++.+...|+...... .......
T Consensus 156 ~~~~~l~i~D~dG~~~~~lt~-~~~~~~~P~wSPDGk~Iay~s~~~~~~~i~~~~~~~g~~~~lt~-------~~~~~~~ 227 (415)
T 2hqs_A 156 QFPYELRVSDYDGYNQFVVHR-SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-------FPRHNGA 227 (415)
T ss_dssp SCCEEEEEEETTSCSCEEEEE-ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-------CSSCEEE
T ss_pred CCCEEEEEECCCCCEEEEEEC-CCCCEECEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEC-------CCCCCCC
T ss_conf 642799996588860489864-88843350586899869999522587605775043474379420-------4544443
Q ss_pred EEECCCCCEEEEEEC---CCEEEEEECCCCEEEEE-ECCCEEEEEEEECCCCEEEECCC---CCEEEEEECCCCEEEEEE
Q ss_conf 999699899999746---98899993788588985-16973489887348968997358---987999987898599984
Q T0558 148 INKNKKGNYLVPLFA---TSEVREIAPNGQLLNSV-KLSGTPFSSAFLDNGDCLVACGD---AHCFVQLNLESNRIVRRV 220 (294)
Q Consensus 148 ~~~s~dG~~i~~g~~---d~~i~~~d~~g~~~~~~-~~~~~~~~~~~~~~g~~~v~~~~---~~~i~~~d~~~g~~~~~~ 220 (294)
..++|||+.|+..+. ...+++++..+...... ..........++++|..++..+. ...++.++..+++.....
T Consensus 228 p~~SPDG~~iaf~~~~~g~~~i~~~~~~~~~~~~lt~~~~~~~~p~~spdG~~i~f~s~r~G~~~i~~~~~~~~~~~~~t 307 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC
T ss_pred CCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEE
T ss_conf 22189998559999688985234402324641000001322226620588863787750488425788757776025641
Q ss_pred CCCCCCCEEECCCCC---EEE--CCCCC--EEEEECCCCEEECCC-CCCCEEEEECCCCCE-EEEEE
Q ss_conf 488764114113453---489--38998--999804677143024-777569999089989-99983
Q T0558 221 NANDIEGVQLFFVAQ---LFP--LQNGG--LYICNWQGHDREAGK-GKHPQLVEIDSEGKV-VWQLN 278 (294)
Q Consensus 221 ~~~~~~~~~~~~~~~---~~~--~~~G~--i~i~~~~~~~~~~~~-~~~~~~~~i~~~G~~-vW~~~ 278 (294)
.. ........+.+. +.+ ..+|. +++.+..+....... +.......+++||+. +|.-.
T Consensus 308 ~~-~~~~~~~~~Spdg~~i~~~~~~~g~~~I~~~d~~tg~~~~lT~~~~d~~PswSPDG~~Iaf~s~ 373 (415)
T 2hqs_A 308 WE-GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp CS-SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEE
T ss_pred CC-CCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCEEECCCCCEEEEEEE
T ss_conf 14-6634443227886546889568984799999899998899358998747499589999999996
No 142
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.20 E-value=7.9e-08 Score=72.58 Aligned_cols=158 Identities=11% Similarity=0.110 Sum_probs=84.1
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCC----CCCEEEEECCCCEEEEE-------CCEEEEEECC-CCCEEEEE
Q ss_conf 858999747986999988788299999449987----31164790798399841-------8828997526-77036772
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGW----ECNSVAATKAGEILFSY-------SKGAKMITRD-GRELWNIA 90 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~----~~~~~~~~pdG~~l~s~-------~~~v~~~~~~-~~~~~~~~ 90 (294)
+..++.++.+++++++|.+|||++|++.+.... .+.....--++.+++.. .+.+..+|.. |+++|++.
T Consensus 128 ~g~v~~~t~dg~l~ALDa~TG~~~W~~~~~~~~~~~~~~t~~p~v~~~~ViiG~~~~~~~~~G~v~A~D~~TGe~~W~~~ 207 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCEEECCCEECCCCCCCCCCCCEEEEEECCCCCEEEEEE
T ss_conf 88599993898499995767750112377567666311302776976717306655444666608999888895767884
Q ss_pred CCCC------------------------------CCE-EEEEECCCCCEEEEEEC-------------------CCCEEE
Q ss_conf 3777------------------------------631-48787378758999705-------------------897999
Q T0558 91 APAG------------------------------CEM-QTARILPDGNALVAWCG-------------------HPSTIL 120 (294)
Q Consensus 91 ~~~~------------------------------~~v-~~~~~~~dg~~l~~~s~-------------------~~~~~~ 120 (294)
.... ..+ ...++.++.+.++.... ...++.
T Consensus 208 t~~~~~~~~~~~~~~~~~~~tw~~~~~~~~~~gGg~vW~~~s~D~~~g~~y~~tg~~~~~~~~~~~~~~Gdn~~s~sivA 287 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 02456776777643322332238887625736987532430174234817743688886667656786665556412799
Q ss_pred EECCCCCEEEEEECCCCCCC---CCCCCCEEEECCCC---CEEEEEECCCEEEEEECC-CCEEEEEE
Q ss_conf 98568958899970677677---66740089996998---999997469889999378-85889851
Q T0558 121 EVNMKGEVLSKTEFETGIER---PHAQFRQINKNKKG---NYLVPLFATSEVREIAPN-GQLLNSVK 180 (294)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~---~~~~~~~~~~s~dG---~~i~~g~~d~~i~~~d~~-g~~~~~~~ 180 (294)
.+..+|+..|.++....... ...+........+| ++++.+..+|.++.+|++ |+.+|...
T Consensus 288 ld~~tG~~~W~~Q~t~~D~wd~~~~~~~~l~~~~~~G~~~~vv~~~~k~G~~y~lDr~TGe~l~~~~ 354 (677)
T 1kb0_A 288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEEEEECCCCCCCCCCCCCCCEEECCEEECCCEEEEEEEECCCCCEEEEECCCCCCCCCCC
T ss_conf 7157883677532478742134220112402223069545777850457707998768894301003
No 143
>3fgb_A Uncharacterized protein Q89ZH8_bactn; BTR289B, NESG, structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.18 E-value=3.9e-07 Score=67.50 Aligned_cols=234 Identities=13% Similarity=0.059 Sum_probs=130.2
Q ss_pred HHCCCCCCCCEEEEECCCC------EEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE---CCEEEEEECC--C
Q ss_conf 2001478885899974798------699998878829999944998731164790798399841---8828997526--7
Q T0558 15 PFAQGSSPQHLLVGGSGWN------KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY---SKGAKMITRD--G 83 (294)
Q Consensus 15 ~~~~~s~~~~~l~~gs~~~------~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~~--~ 83 (294)
.+++.|+++++|++.+..+ .++.+|.+++++...... .......+.++|||+.++.. ++.+.+++.+ +
T Consensus 45 ~~la~SpDG~~lYv~~~~~~~~~~v~v~~id~~~g~~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~v~~~~~~g 123 (361)
T 3fgb_A 45 SYLVPSADGKFIYAVSEFSNEQAAANAFAFNKEEGTFRLLNTQ-KTGGEDPCYIITNGSNVVTANYSGGSISVFPIDKDG 123 (361)
T ss_dssp CSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEE-ECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTS
T ss_pred CEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEC-CCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCC
T ss_conf 8799979949999998358988549999997999939997662-567998589972899579976589879999804678
Q ss_pred CCEE-----EE-------ECCCCCCEEEEEECCCCCEEEEEEC-CCCEEEEECCCCC------EEEEEE-CCCCCCCCCC
Q ss_conf 7036-----77-------2377763148787378758999705-8979999856895------889997-0677677667
Q T0558 84 RELW-----NI-------AAPAGCEMQTARILPDGNALVAWCG-HPSTILEVNMKGE------VLSKTE-FETGIERPHA 143 (294)
Q Consensus 84 ~~~~-----~~-------~~~~~~~v~~~~~~~dg~~l~~~s~-~~~~~~~~~~~G~------~~~~~~-~~~~~~~~~~ 143 (294)
.... .. ..........+.++|+|+++++... .+.+..+...... ..+... ..........
T Consensus 124 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~s~~g~~l~v~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 203 (361)
T 3fgb_A 124 SLLPASEVVKFKGSGADKERQEKPHLHCVRITPDGKYLFADDLGTDQIHKFIVNPNAKADNEDVFLKEGSPASYKVEAGS 203 (361)
T ss_dssp CBCSCCEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTSCCCSEEEEEEEEEECCTTC
T ss_pred CEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCCC
T ss_conf 41366777650577776455689954399987999989998738982999983188760000000256775128758899
Q ss_pred CCCEEEECCCCCEEEEE-ECCCEEEEEECCCCEEEEE---E----CCCEEEEEEEECCCCEEEECC--CCCE--EEEEEC
Q ss_conf 40089996998999997-4698899993788588985---1----697348988734896899735--8987--999987
Q T0558 144 QFRQINKNKKGNYLVPL-FATSEVREIAPNGQLLNSV---K----LSGTPFSSAFLDNGDCLVACG--DAHC--FVQLNL 211 (294)
Q Consensus 144 ~~~~~~~s~dG~~i~~g-~~d~~i~~~d~~g~~~~~~---~----~~~~~~~~~~~~~g~~~v~~~--~~~~--i~~~d~ 211 (294)
..+.+.++++++.+++. ..++.+.+++......... . ....+..+.++|+|+++++.. ..+. +..++.
T Consensus 204 ~p~~~~~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spDG~~l~va~~~~~~~~~v~~~~~ 283 (361)
T 3fgb_A 204 GPRHLTFAPNGSYAYLINELSGTVIAFEYNDGELKEIQTIAADTVGAKGSGDIHISPDGKFLYASNRLKADGLAIFSIHP 283 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCCSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECT
T ss_pred CCEEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEC
T ss_conf 98799993289826999468870689982388505755214467888574599994899999995777898268999928
Q ss_pred CCCEEEEEECCCCCCCEEECCCCCEEECCCCCE-EEEECCCCEE
Q ss_conf 898599984488764114113453489389989-9980467714
Q T0558 212 ESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGL-YICNWQGHDR 254 (294)
Q Consensus 212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i-~i~~~~~~~~ 254 (294)
.++++....... .-..+.++.+.+||+. ++.+...+.+
T Consensus 284 ~t~~~~~~~~~~-----~G~~p~~ia~spDG~~lyva~~~~~~V 322 (361)
T 3fgb_A 284 ENGMLTKVGYQL-----TGIHPRNFIITPNGKYLLVACRDSNVI 322 (361)
T ss_dssp TTCCEEEEEEEE-----CSSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred CCCEEEEEEEEC-----CCCCEEEEEEECCCCEEEEEECCCCEE
T ss_conf 998799947606-----899675899937999999996789919
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.16 E-value=8.4e-08 Score=72.39 Aligned_cols=216 Identities=8% Similarity=-0.032 Sum_probs=131.3
Q ss_pred CCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCC-CCCCCEEEEECCCCEEEEEC------CEEEEEECCCCCEEEEE
Q ss_conf 147888589997479869999887882999994499-87311647907983998418------82899752677036772
Q T0558 18 QGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-GWECNSVAATKAGEILFSYS------KGAKMITRDGRELWNIA 90 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~-~~~~~~~~~~pdG~~l~s~~------~~v~~~~~~~~~~~~~~ 90 (294)
..|++++.|+..+ ++.+..++...++..-...... ......++++|||+.++... ..++..+.+++.....
T Consensus 48 ~wSPDG~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~i~~~~~~~~~~~~~- 125 (297)
T 2ojh_A 48 NWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM- 125 (297)
T ss_dssp EECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC-
T ss_pred EECCCCCEEEEEE-CCCEEEEECCCCCEEEEEECCCCCCEECCEEECCCCCEEECCCCCCCCCEEEEEEEECCCCEEEE-
T ss_conf 9977998999998-99789998179971488741688732165059889960021101799976999973024530340-
Q ss_pred CCCCCCEEEEEECCCCCEEEEEE-CCCC--EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE-CCC--
Q ss_conf 37776314878737875899970-5897--99998568958899970677677667400899969989999974-698--
Q T0558 91 APAGCEMQTARILPDGNALVAWC-GHPS--TILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF-ATS-- 164 (294)
Q Consensus 91 ~~~~~~v~~~~~~~dg~~l~~~s-~~~~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~-~d~-- 164 (294)
..........|+|||+.++..+ .+.. +.+.+..+|+..... .+........+++||++++... .++
T Consensus 126 -~~~~~~~~~~~SpDg~~i~f~~~~d~~~~i~~~d~~t~~~~~~~-------~~~~~~~~~~~s~dg~~l~~~~~~~g~~ 197 (297)
T 2ojh_A 126 -TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-------HGEGRNDGPDYSPDGRWIYFNSSRTGQM 197 (297)
T ss_dssp -CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-------CSSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred -CCCCCCEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCEEEEE-------ECCCCCCCEEECCCCCEEEEEECCCCCE
T ss_conf -11377503548899986899776068711441143427256775-------3167410003878999868986689953
Q ss_pred EEEEEECCCCEEEEE-ECCCEEEEEEEECCCCEEEECCC-----------CCEEEEEECCCCEEEEEECCCCCCCEEECC
Q ss_conf 899993788588985-16973489887348968997358-----------987999987898599984488764114113
Q T0558 165 EVREIAPNGQLLNSV-KLSGTPFSSAFLDNGDCLVACGD-----------AHCFVQLNLESNRIVRRVNANDIEGVQLFF 232 (294)
Q Consensus 165 ~i~~~d~~g~~~~~~-~~~~~~~~~~~~~~g~~~v~~~~-----------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 232 (294)
.++.++.++...... .......+..++++|+.++..+. +..+++++..+++...-....... ..
T Consensus 198 ~i~~~~~~~~~~~~lt~~~~~~~~~~~s~dg~~i~f~s~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~----~~ 273 (297)
T 2ojh_A 198 QIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ----GT 273 (297)
T ss_dssp EEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST----TT
T ss_pred EEEEECCCCCCEEEEECCCCCCEEEEECCCCCEEEEEECCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCC----CC
T ss_conf 55686065361599511347620000879999999996689832104788647999989999778979636898----74
Q ss_pred CCCEEECCCCCEEEE
Q ss_conf 453489389989998
Q T0558 233 VAQLFPLQNGGLYIC 247 (294)
Q Consensus 233 ~~~~~~~~~G~i~i~ 247 (294)
.....+.|||+.++.
T Consensus 274 ~~~p~~SPDG~~i~f 288 (297)
T 2ojh_A 274 MNSPNWSPDGDEFAY 288 (297)
T ss_dssp SCSCCBCTTSSEEEE
T ss_pred EEEEEECCCCCEEEE
T ss_conf 763899989999999
No 145
>2bbk_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 1.75A {Paracoccus denitrificans} SCOP: b.69.2.1 PDB: 2gc4_A* 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 1mg2_A* 1mg3_A* 2mta_H*
Probab=99.14 E-value=2.5e-07 Score=68.90 Aligned_cols=226 Identities=12% Similarity=0.027 Sum_probs=131.2
Q ss_pred HCCCCCCCCEEEEEC----------CCCEEEEEECCCCEEEEEEECCCC------CCCCEEEEECCCCEEEEE----CCE
Q ss_conf 001478885899974----------798699998878829999944998------731164790798399841----882
Q T0558 16 FAQGSSPQHLLVGGS----------GWNKIAIINKDTKEIVWEYPLEKG------WECNSVAATKAGEILFSY----SKG 75 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs----------~~~~i~~~d~~tg~~~w~~~~~~~------~~~~~~~~~pdG~~l~s~----~~~ 75 (294)
-.+.|++++.|++.+ .++.|.+||.++++.+++...... .....++++|||+.++.. +..
T Consensus 51 ~~a~SpDg~~l~~~~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~ 130 (355)
T 2bbk_H 51 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 130 (355)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred CEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCEEEEEECCCCCE
T ss_conf 57993899999999677664101479998999999999798677078886034358873399956998689873255867
Q ss_pred EEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC
Q ss_conf 89975267703677237776314878737875899970589799998568958899970677677667400899969989
Q T0558 76 AKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN 155 (294)
Q Consensus 76 v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~ 155 (294)
+.+|+..+..+............ ... ....+++.+.|+...++.......................+....+.+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~s~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (355)
T 2bbk_H 131 VGVVDLEGKAFKRMLDVPDCYHI--FPT-APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 207 (355)
T ss_dssp EEEEETTTTEEEEEEECCSEEEE--EEE-ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEEECCCCCEEEEECCCCEEEE--ECC-CCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEECEEEECCCCCCCC
T ss_conf 99986589837866446752567--028-995489992899899999068826889973456301201040014248886
Q ss_pred EEEEEECCCEEEEEECCCCEEEEEE---C-----------CCEEEEEEEECCCCEEEECC----------CCCEEEEEEC
Q ss_conf 9999746988999937885889851---6-----------97348988734896899735----------8987999987
Q T0558 156 YLVPLFATSEVREIAPNGQLLNSVK---L-----------SGTPFSSAFLDNGDCLVACG----------DAHCFVQLNL 211 (294)
Q Consensus 156 ~i~~g~~d~~i~~~d~~g~~~~~~~---~-----------~~~~~~~~~~~~g~~~v~~~----------~~~~i~~~d~ 211 (294)
.++....++.+++++..+....... . .+....+.+++++..++... .+..+.++|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~ 287 (355)
T 2bbk_H 208 RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA 287 (355)
T ss_dssp EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCCEEEEEC
T ss_conf 47961688569999768991788731278512068642125621788973788568887068871687058971477867
Q ss_pred CCCEEEEEECCCCCCCEEECCCCCEEECCCCC--EEEEECCC
Q ss_conf 89859998448876411411345348938998--99980467
Q T0558 212 ESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG--LYICNWQG 251 (294)
Q Consensus 212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~--i~i~~~~~ 251 (294)
.+++.+.++... ..+.++.+.+||+ +++.+...
T Consensus 288 ~~~~~~~~~~~~-------~~~~~~~~spDG~~~l~a~~~~~ 322 (355)
T 2bbk_H 288 KTGERLAKFEMG-------HEIDSINVSQDEKPLLYALSTGD 322 (355)
T ss_dssp TTCCEEEEEEEE-------EEECEEEECCSSSCEEEEEETTT
T ss_pred CCCCEEEEECCC-------CCEEEEEECCCCCEEEEEEECCC
T ss_conf 999598997489-------97448999899997999997899
No 146
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 2fpb_A* 2v91_A*
Probab=99.11 E-value=1.6e-07 Score=70.44 Aligned_cols=49 Identities=20% Similarity=0.133 Sum_probs=20.0
Q ss_pred CEEEEEECCCCEEEEE-ECCCEEEEEEEECCCC-EEEECCCCCEEEEEECC
Q ss_conf 8899993788588985-1697348988734896-89973589879999878
Q T0558 164 SEVREIAPNGQLLNSV-KLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLE 212 (294)
Q Consensus 164 ~~i~~~d~~g~~~~~~-~~~~~~~~~~~~~~g~-~~v~~~~~~~i~~~d~~ 212 (294)
|.++.|+..+...... ..-..|..+.++++|+ ++++.+..++|..++.+
T Consensus 165 G~v~~~d~~~g~~~~~~~~l~~pnGia~s~dg~~lyvadt~~~rI~r~~~~ 215 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred CEEEEEECCCCEEEEEEECCCEEEEEEECCCCCEEEEECCCCCEEEEEECC
T ss_conf 879999999996999982652010689978989999922899889999897
No 147
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, beta-propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 2gvx_A 2gvu_A 2iaq_A 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A 2iav_A 3hli_A 3hlh_A 3i1c_A
Probab=99.11 E-value=1e-06 Score=64.42 Aligned_cols=216 Identities=11% Similarity=0.029 Sum_probs=117.9
Q ss_pred CCCCCEEEEECC-------CCEEEEEECCCCEEEEEEEC---CCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEE
Q ss_conf 788858999747-------98699998878829999944---998731164790798399841--882899752677036
Q T0558 20 SSPQHLLVGGSG-------WNKIAIINKDTKEIVWEYPL---EKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELW 87 (294)
Q Consensus 20 s~~~~~l~~gs~-------~~~i~~~d~~tg~~~w~~~~---~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~ 87 (294)
.++.+++++... +++|.-+|.++++...-..- .....+..+++.+||..++.. ...+..++.+++...
T Consensus 26 d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~p~Gl~~~~~g~~l~vad~~~~i~~~~~~g~~~~ 105 (314)
T 1pjx_A 26 DKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEE 105 (314)
T ss_dssp CTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEE
T ss_pred ECCCCEEEEECCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCEEE
T ss_conf 89999999977640511439999999899994999977665567885137999479999999979993999968999899
Q ss_pred EEECCCC----CCEEEEEECCCCCEEEEEECCC--------------CEEEEECCCCCEEEEEECCCCCCCCCCCCCEEE
Q ss_conf 7723777----6314878737875899970589--------------799998568958899970677677667400899
Q T0558 88 NIAAPAG----CEMQTARILPDGNALVAWCGHP--------------STILEVNMKGEVLSKTEFETGIERPHAQFRQIN 149 (294)
Q Consensus 88 ~~~~~~~----~~v~~~~~~~dg~~l~~~s~~~--------------~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 149 (294)
....... ..+..+.+.++|++.++..... +.+.....+|+....... ....+.++
T Consensus 106 ~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dG~~~~~~~~-------~~~pNGia 178 (314)
T 1pjx_A 106 IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTA-------FQFPNGIA 178 (314)
T ss_dssp CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEE-------ESSEEEEE
T ss_pred EEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECC-------CCCCCCCE
T ss_conf 98636789746898259998899999836755645443343210578737999589977998458-------54446158
Q ss_pred ECCCCC-----EEEEEECCCEEEEEECC--CCEE----EEE-E--CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCE
Q ss_conf 969989-----99997469889999378--8588----985-1--69734898873489689973589879999878985
Q T0558 150 KNKKGN-----YLVPLFATSEVREIAPN--GQLL----NSV-K--LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 215 (294)
Q Consensus 150 ~s~dG~-----~i~~g~~d~~i~~~d~~--g~~~----~~~-~--~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~ 215 (294)
+++|++ ++++.+..+.|+.++.+ +... +.. . ....|-++++-.+|+++++....+.|..+|+.+++
T Consensus 179 ~~~~~d~~~~~lyv~dt~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~PDGla~D~~G~LyVa~~~~g~V~~~dp~~g~ 258 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp EEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS
T ss_pred ECCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCE
T ss_conf 88788876779999713575168988879983777788997144555642230183899899998379999999699997
Q ss_pred EEEEECCCCCCCEEECCCCCEEECCCCC-EEEEE
Q ss_conf 9998448876411411345348938998-99980
Q T0558 216 IVRRVNANDIEGVQLFFVAQLFPLQNGG-LYICN 248 (294)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~-i~i~~ 248 (294)
++..+.... ..+.++.+.++|+ ++|..
T Consensus 259 ~~~~i~~~~------~~pt~~afg~d~~~l~Vt~ 286 (314)
T 1pjx_A 259 PKMRIRCPF------EKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp CSEEEECSS------SCEEEEEECTTSSEEEEEE
T ss_pred EEEEEECCC------CCEEEEEEECCCCEEEEEE
T ss_conf 999997999------9868999917989999998
No 148
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1
Probab=99.10 E-value=2.7e-11 Score=97.89 Aligned_cols=203 Identities=10% Similarity=-0.118 Sum_probs=120.3
Q ss_pred CCEEEEECCCCEEEEEECCC-CEEEEEE---E--CCCCCCCCEEEEECCCCEEEEECCEEE-----EEECCCCCEEE--E
Q ss_conf 85899974798699998878-8299999---4--499873116479079839984188289-----97526770367--7
Q T0558 23 QHLLVGGSGWNKIAIINKDT-KEIVWEY---P--LEKGWECNSVAATKAGEILFSYSKGAK-----MITRDGRELWN--I 89 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~t-g~~~w~~---~--~~~~~~~~~~~~~pdG~~l~s~~~~v~-----~~~~~~~~~~~--~ 89 (294)
++-++.|..|+++++++... +...|.. . -++-..+..++|+|||+++++.+.... .++........ .
T Consensus 3 ~~~~l~g~~dg~~~~~~~~~~~~~~W~~~~~~~g~g~~~~~~~vafSPdG~~~a~~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (236)
T 1tl2_A 3 GESMLRGVYQDKFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKI 82 (236)
T ss_dssp CCCCEEEEETTEEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEE
T ss_pred CCEEEEEECCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEE
T ss_conf 72288884188798237986466554246407811761263089988998889987788337666158865541110278
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC-EEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEE
Q ss_conf 23777631487873787589997058979999856895-88999706776776674008999699899999746988999
Q T0558 90 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGE-VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 168 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~ 168 (294)
..++...+.++.+.|++.+++ +.+.++.+|...... ..|.........+|...++.++|+|||+++|+++.|+++++
T Consensus 83 g~~~~~~~~~~s~d~~g~l~a--~~~~~~~~w~~~~~~~~~w~g~~~~~~~gh~~~v~~vafspdG~~lAs~s~d~tv~l 160 (236)
T 1tl2_A 83 GNGGWNQFQFLFFDPNGYLYA--VSKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHGQQFYKAL 160 (236)
T ss_dssp ECSCGGGCSEEEECTTSCEEE--EETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEETTEEEEEC
T ss_pred ECCCCEEEEEEEECCCEEEEE--EECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEE
T ss_conf 417861158998679807999--909987996468996401213322214898675168888899868999679996995
Q ss_pred EECCCCE------EEEE-ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCC
Q ss_conf 9378858------8985-16973489887348968997358987999987898599984488764114113453489389
Q T0558 169 IAPNGQL------LNSV-KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN 241 (294)
Q Consensus 169 ~d~~g~~------~~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (294)
|+..... .... .+.+.+..+.++|||++ |+..+|++.. ++... +....+.+|
T Consensus 161 w~~~~~~~~~~~~~~~~~g~~~~~~~v~fSpDG~l------------w~~~~G~l~~---gh~~~------~~~v~~s~d 219 (236)
T 1tl2_A 161 PPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL------------FGVQGGKFYE---DYPPS------YAYDNWLAR 219 (236)
T ss_dssp CCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE------------EEEETTEEEE---ESCCC------STTCCHHHH
T ss_pred CCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCE------------EEECCCCEEE---CCCCC------CCEEEECCC
T ss_conf 84898874313210454145787679999999988------------9928997773---26777------025688888
Q ss_pred CCEEEEE
Q ss_conf 9899980
Q T0558 242 GGLYICN 248 (294)
Q Consensus 242 G~i~i~~ 248 (294)
|+++...
T Consensus 220 ~~~l~sg 226 (236)
T 1tl2_A 220 AKLIGNG 226 (236)
T ss_dssp CEEEEES
T ss_pred CCEEEEC
T ss_conf 9889856
No 149
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1
Probab=99.10 E-value=1.1e-10 Score=93.50 Aligned_cols=174 Identities=7% Similarity=-0.108 Sum_probs=74.8
Q ss_pred CCCCCCCCEEEEECC---CCEEEEEECCCCEEEEEEEC-CCCCCCCEEEEECCCCEEEEECCEEEEEECCCC--C-----
Q ss_conf 014788858999747---98699998878829999944-998731164790798399841882899752677--0-----
Q T0558 17 AQGSSPQHLLVGGSG---WNKIAIINKDTKEIVWEYPL-EKGWECNSVAATKAGEILFSYSKGAKMITRDGR--E----- 85 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~---~~~i~~~d~~tg~~~w~~~~-~~~~~~~~~~~~pdG~~l~s~~~~v~~~~~~~~--~----- 85 (294)
+.+|++.+++++++. +.++..++.++....-.... ++...+..+.++|+|.++++.+.+++.|+..+. .
T Consensus 46 vafSPdG~~~a~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~d~~g~l~a~~~~~~~~w~~~~~~~~~w~g~ 125 (236)
T 1tl2_A 46 LFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVSKDKLYKASPPQSDTDNWIAR 125 (236)
T ss_dssp EEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHH
T ss_pred EEECCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCEEEEEEECCCEEEECCCCCCCCCCCCC
T ss_conf 99889988899877883376661588655411102784178611589986798079999099879964689964012133
Q ss_pred EEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCE
Q ss_conf 36772377763148787378758999705897999985689588999706776776674008999699899999746988
Q T0558 86 LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSE 165 (294)
Q Consensus 86 ~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~ 165 (294)
......+|...+..++|+|||+++++++.|.++.+|+..++... .........++...+..++|+|||++..+
T Consensus 126 ~~~~~~gh~~~v~~vafspdG~~lAs~s~d~tv~lw~~~~~~~~-~~~~~~~~~g~~~~~~~v~fSpDG~lw~~------ 198 (236)
T 1tl2_A 126 ATEVGSGGWSGFKFLFFHPNGYLYAVHGQQFYKALPPVSNQDNW-LARATKIGQGGWDTFKFLFFSSVGTLFGV------ 198 (236)
T ss_dssp SEEEECSSGGGEEEEEECTTSCEEEEETTEEEEECCCSSTTCCH-HHHCEEEESSSGGGEEEEEECTTSCEEEE------
T ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEECCCCCCCCC-CCCCEEEEECCCCCEEEEEECCCCCEEEE------
T ss_conf 22214898675168888899868999679996995848988743-13210454145787679999999988992------
Q ss_pred EEEEECCCCEEEEEECCCEEEEEEEECCCCEEEECCCCC
Q ss_conf 999937885889851697348988734896899735898
Q T0558 166 VREIAPNGQLLNSVKLSGTPFSSAFLDNGDCLVACGDAH 204 (294)
Q Consensus 166 i~~~d~~g~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~ 204 (294)
..|+... .+...+..+.+++++++++.++.|.
T Consensus 199 -----~~G~l~~--gh~~~~~~v~~s~d~~~l~sg~~d~ 230 (236)
T 1tl2_A 199 -----QGGKFYE--DYPPSYAYDNWLARAKLIGNGGWDD 230 (236)
T ss_dssp -----ETTEEEE--ESCCCSTTCCHHHHCEEEEESSGGG
T ss_pred -----CCCCEEE--CCCCCCCEEEECCCCCEEEECCCHH
T ss_conf -----8997773--2677702568888898898564146
No 150
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function, structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.08 E-value=1.4e-06 Score=63.38 Aligned_cols=194 Identities=12% Similarity=0.042 Sum_probs=91.8
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEE--EEE--CCEEEEEECCCCCEE-EE---ECCC
Q ss_conf 885899974798699998878829999944998731164790798399--841--882899752677036-77---2377
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEIL--FSY--SKGAKMITRDGRELW-NI---AAPA 93 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l--~s~--~~~v~~~~~~~~~~~-~~---~~~~ 93 (294)
...+++.-.++.+|+.++++++++. .+..+...... ....+...+ ... ...+..+........ .. ....
T Consensus 141 ~~~i~v~D~~n~rIr~i~~~~~~vt-ti~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 217 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVT-TVHPGFKGGKP--AVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTF 217 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEE-EEEETCCBCBC--EECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTS
T ss_pred CCEEEEEECCCCEEEEEECCCCEEE-EECCCCCCCCC--CCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCCCCCCC
T ss_conf 9709999899997999989998999-98898867877--76453453047774688539999888783210137564121
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCC-CCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC
Q ss_conf 76314878737875899970589799998568958899970677-67766740089996998999997469889999378
Q T0558 94 GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETG-IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 172 (294)
Q Consensus 94 ~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~ 172 (294)
...+..+++.+.++++++.......+.++..++...-....... ..........++++++|++.++-.....|+.++.+
T Consensus 218 ~~~~~~ia~d~~~~~lYv~d~~~~~~r~~~~~~~~~~~~g~~~~g~~~~~~~P~~iavd~~G~lyvad~~n~~I~~~~~~ 297 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred CCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCC
T ss_conf 48831999969999899996899389999589978986256676763547896589994899799998899778999889
Q ss_pred CCEEEEEEC---------------CCEEEEEEEECCCCEEEECC-CCCEEEEEECCCCEEEE
Q ss_conf 858898516---------------97348988734896899735-89879999878985999
Q T0558 173 GQLLNSVKL---------------SGTPFSSAFLDNGDCLVACG-DAHCFVQLNLESNRIVR 218 (294)
Q Consensus 173 g~~~~~~~~---------------~~~~~~~~~~~~g~~~v~~~-~~~~i~~~d~~~g~~~~ 218 (294)
+...+..-. -..|..+++.++|+++++.. .+++|+.++..+|.+..
T Consensus 298 g~~~~~aG~~~~~g~~dG~g~~A~f~~P~gi~~d~~gniyvaD~~~n~~Irki~~~~g~v~t 359 (409)
T 3hrp_A 298 GECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 97999955677788555652312662840899979999999978999199999999985999
No 151
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, enzyme mechanism, virginiamycin B hydrolase, streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.07 E-value=1.5e-06 Score=63.15 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=163.4
Q ss_pred CCCCCCEEEEECCCCEEEEEECCCCEEEEEEECC-CCCCCCEEEEECCCCEEEEECC--EEEEEECCCCCEEEEECCCCC
Q ss_conf 4788858999747986999988788299999449-9873116479079839984188--289975267703677237776
Q T0558 19 GSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLE-KGWECNSVAATKAGEILFSYSK--GAKMITRDGRELWNIAAPAGC 95 (294)
Q Consensus 19 ~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~-~~~~~~~~~~~pdG~~l~s~~~--~v~~~~~~~~~~~~~~~~~~~ 95 (294)
-.++++++++...++.|..+|.+ |++. ++... ....++.+++.++|++.++... .+...+...............
T Consensus 22 ~d~dG~lwv~~~~~~~i~~~d~~-g~~~-~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (299)
T 2z2n_A 22 VSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDS 99 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTC
T ss_pred ECCCCCEEEEECCCCEEEEEECC-CCEE-EEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCEEEEECCCCCC
T ss_conf 99999999998899999999699-9999-999358899757999989999999984774136521357514665179999
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCE
Q ss_conf 31487873787589997058979999856895889997067767766740089996998999997469889999378858
Q T0558 96 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQL 175 (294)
Q Consensus 96 ~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~ 175 (294)
....+...+++...+..... ........+|+...... . ........++..+++...+.....+.+..++..+..
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~-~----~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~ 173 (299)
T 2z2n_A 100 APYGITEGPNGDIWFTEMNG-NRIGRITDDGKIREYEL-P----NKGSYPSFITLGSDNALWFTENQNNAIGRITESGDI 173 (299)
T ss_dssp CEEEEEECTTSCEEEEETTT-TEEEEECTTCCEEEEEC-S----STTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE
T ss_pred CCCEEEEECCCCEEEECCCC-EEEEEEEECCCEEEEEC-C----CCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCCE
T ss_conf 95139985440102203430-13544530462577402-3----457885278713661389732899869999799987
Q ss_pred EEEE--ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCE
Q ss_conf 8985--16973489887348968997358987999987898599984488764114113453489389989998046771
Q T0558 176 LNSV--KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHD 253 (294)
Q Consensus 176 ~~~~--~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~ 253 (294)
.... .....+......+++..+++...++.+..++.............. ..+.++...++|++++..+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~i~~d~~G~lwv~~~~~~~ 247 (299)
T 2z2n_A 174 TEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPN------ARPHAITAGAGIDLWFTEWGANK 247 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTT------CCEEEEEECSTTCEEEEETTTTE
T ss_pred EEEECCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCC------CCEEEEEECCCCCEEEEECCCCE
T ss_conf 998515554332047777999799997579869999799988999735887------52147898799989999938998
Q ss_pred EECC-------------CCCCCEEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 4302-------------4777569999089989999835885378886
Q T0558 254 REAG-------------KGKHPQLVEIDSEGKVVWQLNDKVKFGMIST 288 (294)
Q Consensus 254 ~~~~-------------~~~~~~~~~i~~~G~~vW~~~~~~~~~~i~~ 288 (294)
+... ....+.-+++|+ ..+|--.....+.++.-
T Consensus 248 i~~~~~~g~~~~~~~~~~~~~p~~i~~D~--~~lwv~t~~ggi~rl~l 293 (299)
T 2z2n_A 248 IGRLTSNNIIEEYPIQIKSAEPHGICFDG--ETIWFAMECDKIGKLTL 293 (299)
T ss_dssp EEEEETTTEEEEEECSSSSCCEEEEEECS--SCEEEEETTTEEEEEEE
T ss_pred EEEECCCCCEEEEECCCCCCCEEEEEEEC--CEEEEEECCCCEEEEEE
T ss_conf 99995999899998889999858999959--99999989998999982
No 152
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl cyclase, N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.03 E-value=4.6e-07 Score=67.00 Aligned_cols=200 Identities=11% Similarity=0.072 Sum_probs=124.5
Q ss_pred CEEEEEEECCCCCCCCEEEEECCCCEEEEE----CCEEEEEECCCCCEEEE-ECCCCCCEEEEEECCCCCEEEEEE-CCC
Q ss_conf 829999944998731164790798399841----88289975267703677-237776314878737875899970-589
Q T0558 43 KEIVWEYPLEKGWECNSVAATKAGEILFSY----SKGAKMITRDGRELWNI-AAPAGCEMQTARILPDGNALVAWC-GHP 116 (294)
Q Consensus 43 g~~~w~~~~~~~~~~~~~~~~pdG~~l~s~----~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~~~~dg~~l~~~s-~~~ 116 (294)
-+++.+++-+...-...+.|.++|+++.+. +..+..+|...+++.+. ..+.. .++..++++++.++... .++
T Consensus 9 ~~vv~~~phd~~~ftqGL~f~~~~~LyeStGlyG~StI~~iDl~Tg~v~~~~~l~~~--~f~eGit~~g~~lyvltw~~~ 86 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS--YFGEGLTLLNEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT--CCEEEEEEETTEEEEEETTCS
T ss_pred EEEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEEEECCCCCEEEEEECCCC--CEEEEEEECCCEEEEEECCCC
T ss_conf 999997778985435428992899999979998857799998988959999956987--077999725998999983388
Q ss_pred CEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEECC--CEE--EEEEEE
Q ss_conf 79999856895889997067767766740089996998999997469889999378-8588985169--734--898873
Q T0558 117 STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS--GTP--FSSAFL 191 (294)
Q Consensus 117 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~~~~~--~~~--~~~~~~ 191 (294)
.+.+++..+.+.+.++.... . ....+++||+.+++...++.++++|+. .+.+.+.... +.+ ..-.+.
T Consensus 87 ~v~v~D~~tl~~i~~~~~~~-~-------~Gwglt~dg~~L~vSdGs~~l~~iD~~t~~v~~~I~v~~~~~~~~~lneLe 158 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQM-K-------DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp EEEEEETTTTEEEEEEECCS-S-------SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EEEEECCCCCEEEEEEECCC-C-------CCEEECCCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEE
T ss_conf 57997287765888872589-8-------736991499999998799718997388870778999836994223420027
Q ss_pred -CCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCC------C-EEECCCCCEEECCCC-CEEEEECCCC
Q ss_conf -48968997358987999987898599984488764------1-141134534893899-8999804677
Q T0558 192 -DNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE------G-VQLFFVAQLFPLQNG-GLYICNWQGH 252 (294)
Q Consensus 192 -~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~------~-~~~~~~~~~~~~~~G-~i~i~~~~~~ 252 (294)
.+|..++.....+.|.++|.++|++...+...... . ......+++++.+++ ++++.+..+.
T Consensus 159 ~~~g~iyan~~~~~~I~~ID~~TG~V~~~id~~~l~~~~~~~~~~~~~VlNGIA~dp~~~~l~VTGK~Wp 228 (266)
T 2iwa_A 159 YINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp EETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred EECCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 7168799963479859999899995999998766501203345876661066878189998999965899
No 153
>2be1_A Serine/threonine-protein kinase/endoribonuclease IRE1; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=99.02 E-value=1.1e-08 Score=78.96 Aligned_cols=200 Identities=9% Similarity=0.028 Sum_probs=117.1
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEE----EECCCCEEE--EECCEEEEEECCC-CCEEEEECCCC-
Q ss_conf 858999747986999988788299999449987311647----907983998--4188289975267-70367723777-
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVA----ATKAGEILF--SYSKGAKMITRDG-RELWNIAAPAG- 94 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~----~~pdG~~l~--s~~~~v~~~~~~~-~~~~~~~~~~~- 94 (294)
+.+|+.++.+++|+++|..||+++|+++.+......... ...+..+++ +.++.++.++..+ ..+|.+.....
T Consensus 10 ~d~v~v~t~dG~l~AlD~~TG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~dG~Lyald~~tG~~~w~~~~~~~v 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 99999991899699998888987888648998714787468712489659997189987999989999570310357610
Q ss_pred ----------CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCC------CEEEECCCCCEEE
Q ss_conf ----------631487873787589997058979999856895889997067767766740------0899969989999
Q T0558 95 ----------CEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQF------RQINKNKKGNYLV 158 (294)
Q Consensus 95 ----------~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~------~~~~~s~dG~~i~ 158 (294)
.......+...++.+++++.++.++..+..+|+++|.|............. ...........++
T Consensus 90 ~~sp~~~~~~~~~~~s~p~i~~~~v~~g~~~g~l~a~D~~TG~i~w~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 13754356763210023288799999993798078841678758899856898776875554556655556656775299
Q ss_pred EEECCCEEEEEECCCCE-E-----EEEECCCE--EEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 97469889999378858-8-----98516973--489887348968997358987999987898599984488
Q T0558 159 PLFATSEVREIAPNGQL-L-----NSVKLSGT--PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 223 (294)
Q Consensus 159 ~g~~d~~i~~~d~~g~~-~-----~~~~~~~~--~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~ 223 (294)
.|..+..+.+++.++.. . |.-...+. ...-....|+.+ ++...++.|+.+|.++|+.+|..+.-
T Consensus 170 ig~t~y~v~~~d~~~~~~~~~y~~w~pn~~d~dl~~~~~~~~D~~~-i~s~~dgsv~AlD~~tG~~~W~~q~~ 241 (339)
T 2be1_A 170 IGKTIFELGIHSYDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARWVSPTF 241 (339)
T ss_dssp EEEEEEECEECCTTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEEECCCC
T ss_pred EEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCE-EEECCCCEEEEEECCCCCEEEEECCC
T ss_conf 8642688999938998289873567887668653345644678750-64158984999967889557784336
No 154
>2p4o_A Hypothetical protein; ZP_00111901.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.90A {Nostoc punctiforme pcc 73102} SCOP: b.68.6.3
Probab=99.00 E-value=2.8e-06 Score=61.25 Aligned_cols=244 Identities=11% Similarity=0.001 Sum_probs=142.9
Q ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCC--CCEE-EEEC
Q ss_conf 01478885899974798699998878829999944998731164790798399841--88289975267--7036-7723
Q T0558 17 AQGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDG--RELW-NIAA 91 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~--~~~~-~~~~ 91 (294)
.+.++++.++++....++|+.+|.+ |+....... ...+..++|+|||+++++. +..++.++..+ ..+. ....
T Consensus 37 iAv~pDG~l~vt~~~~~~I~~i~p~-g~~~~~~~~--~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~v~~~~~~ 113 (306)
T 2p4o_A 37 LASAPDGTIFVTNHEVGEIVSITPD-GNQQIHATV--EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-CCEEEEEEC--SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred EEECCCCCEEEEECCCCEEEEECCC-CCEEEEECC--CCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCEEEEEECC
T ss_conf 6899998799997899979999699-967998667--9986447998899899998389838888513332103566303
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCC--CCCCCCCCEEEECCCCCEE-EEEECCCEEEE
Q ss_conf 77763148787378758999705897999985689588999706776--7766740089996998999-99746988999
Q T0558 92 PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGI--ERPHAQFRQINKNKKGNYL-VPLFATSEVRE 168 (294)
Q Consensus 92 ~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~--~~~~~~~~~~~~s~dG~~i-~~g~~d~~i~~ 168 (294)
........+.+.+++.+++.......+..++...+...+........ ...........+++|++.+ ++.+.++.++.
T Consensus 114 ~~~~~~~~~~~~~~g~~~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~d~~~lyv~~~~~~~i~r 193 (306)
T 2p4o_A 114 PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLR 193 (306)
T ss_dssp TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEE
T ss_pred CCCCCCCCEEECCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCCCCCCEEEECCCCEEEEECCCCEEEE
T ss_conf 44577773069999988852157881466760798269995367530330577766520788669922876546987999
Q ss_pred EECCCCE----EEEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEEC---CC
Q ss_conf 9378858----8985169734898873489689973589879999878985999844887641141134534893---89
Q T0558 169 IAPNGQL----LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL---QN 241 (294)
Q Consensus 169 ~d~~g~~----~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 241 (294)
++..... .........+..+.+.++|+++++...+++|..++.. |+......... .+..+....+. +|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~pdgla~d~dG~l~va~~~~~~V~r~~p~-G~~~~~~~~~~----~~~gpt~~afgg~~~D 268 (306)
T 2p4o_A 194 IPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ----GVIGSTAVAFGQTEGD 268 (306)
T ss_dssp EEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGG----TCTTEEEEEECCSTTT
T ss_pred EEECCCCCCCCCEEECCCCCCCCEEECCCCCEEEEECCCCEEEEECCC-CCEEEEEECCC----CCCCCEEEEECCCCCC
T ss_conf 971799744311010158888751586999999987389999999799-98999997388----9988448997386788
Q ss_pred CC-EEEEECCCC-EEECCCCCCCEEEEEC
Q ss_conf 98-999804677-1430247775699990
Q T0558 242 GG-LYICNWQGH-DREAGKGKHPQLVEID 268 (294)
Q Consensus 242 G~-i~i~~~~~~-~~~~~~~~~~~~~~i~ 268 (294)
++ +|+....+. ..........++++++
T Consensus 269 ~~tlyvtt~~g~~~~~~~~~~~~~~~~~~ 297 (306)
T 2p4o_A 269 CTAIYVVTNGGMFLPPPTGVVPANVVRLE 297 (306)
T ss_dssp TTEEEEEECTTSSSCCTTCCCCEEEEEEE
T ss_pred CCEEEEECCCCCCCCCCCCCCCCEEEEEE
T ss_conf 99999998998768877775676699995
No 155
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, beta-propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 2gvx_A 2gvu_A 2iaq_A 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A 2iav_A 3hli_A 3hlh_A 3i1c_A
Probab=99.00 E-value=8.9e-07 Score=64.91 Aligned_cols=229 Identities=13% Similarity=0.073 Sum_probs=135.4
Q ss_pred CCCEEEEECCCCEEEEEC---------CEEEEEECCCCCEEEEECCC----CCCEEEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 311647907983998418---------82899752677036772377----76314878737875899970589799998
Q T0558 56 ECNSVAATKAGEILFSYS---------KGAKMITRDGRELWNIAAPA----GCEMQTARILPDGNALVAWCGHPSTILEV 122 (294)
Q Consensus 56 ~~~~~~~~pdG~~l~s~~---------~~v~~~~~~~~~~~~~~~~~----~~~v~~~~~~~dg~~l~~~s~~~~~~~~~ 122 (294)
.+..+++.|||+++++.. +.+..++..++.......+. ......+.+.++|+.++++.....+...+
T Consensus 19 ~~EG~a~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~p~Gl~~~~~g~~l~vad~~~~i~~~~ 98 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ 98 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CCEEEEEECCCCEEEEECCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEE
T ss_conf 97087998999999997764051143999999989999499997766556788513799947999999997999399996
Q ss_pred CCCCCEEEEEECCCCCCCC-CCCCCEEEECCCCCEEEEEEC---------------CCEEEEEECCCCEEEEEECCCEEE
Q ss_conf 5689588999706776776-674008999699899999746---------------988999937885889851697348
Q T0558 123 NMKGEVLSKTEFETGIERP-HAQFRQINKNKKGNYLVPLFA---------------TSEVREIAPNGQLLNSVKLSGTPF 186 (294)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~-~~~~~~~~~s~dG~~i~~g~~---------------d~~i~~~d~~g~~~~~~~~~~~~~ 186 (294)
.. +........ ...+. ....+.+++.++|++.++... .+.++.++.+|+.......-..|.
T Consensus 99 ~~-g~~~~~~~~--~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dG~~~~~~~~~~~pN 175 (314)
T 1pjx_A 99 TD-GTFEEIAKK--DSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPN 175 (314)
T ss_dssp TT-SCEEECCSB--CTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEE
T ss_pred CC-CCEEEEEEC--CCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCC
T ss_conf 89-998999863--678974689825999889999983675564544334321057873799958997799845854446
Q ss_pred EEEEECCCC-----EEEECCCCCEEEEEECC-CCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECC---
Q ss_conf 988734896-----89973589879999878-985999844887641141134534893899899980467714302---
Q T0558 187 SSAFLDNGD-----CLVACGDAHCFVQLNLE-SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAG--- 257 (294)
Q Consensus 187 ~~~~~~~g~-----~~v~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~--- 257 (294)
.+.++++++ ++++.+..++|+.++.. .+.+.................-++.+.++|++++..+....+...
T Consensus 176 Gia~~~~~d~~~~~lyv~dt~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~PDGla~D~~G~LyVa~~~~g~V~~~dp~ 255 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC
T ss_conf 15888788876779999713575168988879983777788997144555642230183899899998379999999699
Q ss_pred ----------CCCCCEEEEECCCCCEEEEEE-CCCCEEEEE
Q ss_conf ----------477756999908998999983-588537888
Q T0558 258 ----------KGKHPQLVEIDSEGKVVWQLN-DKVKFGMIS 287 (294)
Q Consensus 258 ----------~~~~~~~~~i~~~G~~vW~~~-~~~~~~~i~ 287 (294)
....+.-+++.+||+.+|-.. .+..+-++.
T Consensus 256 ~g~~~~~i~~~~~~pt~~afg~d~~~l~Vt~~~~g~i~~~~ 296 (314)
T 1pjx_A 256 GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEE
T ss_conf 99799999799998689999179899999986899199997
No 156
>2qe8_A Uncharacterized protein; YP_324691.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.99 E-value=2.7e-06 Score=61.42 Aligned_cols=231 Identities=10% Similarity=-0.010 Sum_probs=138.6
Q ss_pred HCCCCCCCCEEEE--ECCCCEEEEEECCCCEEEEEEECC------CCCCCCEEEEECCCCEEEEEC-------CEEEEEE
Q ss_conf 0014788858999--747986999988788299999449------987311647907983998418-------8289975
Q T0558 16 FAQGSSPQHLLVG--GSGWNKIAIINKDTKEIVWEYPLE------KGWECNSVAATKAGEILFSYS-------KGAKMIT 80 (294)
Q Consensus 16 ~~~~s~~~~~l~~--gs~~~~i~~~d~~tg~~~w~~~~~------~~~~~~~~~~~pdG~~l~s~~-------~~v~~~~ 80 (294)
-.+.+++++++++ +..+..+.+++...+++. .++-. .-..+..++++|+|+++++.. ..+..++
T Consensus 21 gia~~pdG~~~vs~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~p~gva~d~~G~lyv~d~~~~~~~~~~l~~~~ 99 (343)
T 2qe8_A 21 NITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWD 99 (343)
T ss_dssp EEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEE
T ss_pred EEEECCCCCEEEEECCCCCCCEEEEEECCCCEE-ECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEE
T ss_conf 089979999999984669986899998999689-6877887765663461589998999999984688667885199999
Q ss_pred CCCCCEEEE-ECCC-----CCCEEEEEECCCCCEEEEEEC----CCCEEEEECCCCCEEEEEECCC--------------
Q ss_conf 267703677-2377-----763148787378758999705----8979999856895889997067--------------
Q T0558 81 RDGRELWNI-AAPA-----GCEMQTARILPDGNALVAWCG----HPSTILEVNMKGEVLSKTEFET-------------- 136 (294)
Q Consensus 81 ~~~~~~~~~-~~~~-----~~~v~~~~~~~dg~~l~~~s~----~~~~~~~~~~~G~~~~~~~~~~-------------- 136 (294)
..+..+... .... ......+.+.+++..++.... ......+...++..........
T Consensus 100 ~~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
T 2qe8_A 100 TLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGV 179 (343)
T ss_dssp TTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTE
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEECC
T ss_conf 99996999972688764445466887991899848870454434676599976788068883487403146734775042
Q ss_pred ---------CCCCCCCCCCEEEECCCCCEEEEE-ECCCEEEEEECCC------------CEEEEEECCCEEEEEEEECCC
Q ss_conf ---------767766740089996998999997-4698899993788------------588985169734898873489
Q T0558 137 ---------GIERPHAQFRQINKNKKGNYLVPL-FATSEVREIAPNG------------QLLNSVKLSGTPFSSAFLDNG 194 (294)
Q Consensus 137 ---------~~~~~~~~~~~~~~s~dG~~i~~g-~~d~~i~~~d~~g------------~~~~~~~~~~~~~~~~~~~~g 194 (294)
...........+.++++|+.++.. ...+.++.++... ...........+..+.+.++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~d~dG 259 (343)
T 2qe8_A 180 PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH 259 (343)
T ss_dssp ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC
T ss_pred EEECCCCCCCEECCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
T ss_conf 01123557722112468745787189998999979999799996731433342345433100346754455659988999
Q ss_pred CEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCC
Q ss_conf 6899735898799998789859998448876411411345348938998999804677
Q T0558 195 DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGH 252 (294)
Q Consensus 195 ~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~ 252 (294)
+++++...++.|.+|+..++.+....... .+.++.++.+.+||.+++.....+
T Consensus 260 ~l~v~~~~~~~I~~~d~~g~~~~~~~~~~-----~~~~p~~va~~pdG~lyvt~~~~~ 312 (343)
T 2qe8_A 260 NIYVGDLAHSAIGVITSADRAYKLLVTDE-----KLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp CEEEEEGGGTEEEEEETTTTEEEEEEECG-----GGSCEEEEEECTTSCEEEEECCGG
T ss_pred CEEEEECCCCEEEEEECCCCEEEEEECCC-----CCCCCCEEEECCCCCEEEEECCCC
T ss_conf 89999769999999989999599998399-----967823699999982999968855
No 157
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl cyclase, N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.98 E-value=8.8e-07 Score=64.93 Aligned_cols=181 Identities=14% Similarity=0.085 Sum_probs=120.3
Q ss_pred HHHCCCC---CCCCEEEEEC--CCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE---CCEEEEEECCCCC
Q ss_conf 3200147---8885899974--798699998878829999944998731164790798399841---8828997526770
Q T0558 14 APFAQGS---SPQHLLVGGS--GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY---SKGAKMITRDGRE 85 (294)
Q Consensus 14 ~~~~~~s---~~~~~l~~gs--~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~~~~~ 85 (294)
..|.||- .+++++.+.. ++++|+.+|++||+++.+.+++... ....++++|..++.. ++.+.++|....+
T Consensus 20 ~~ftqGL~f~~~~~LyeStGlyG~StI~~iDl~Tg~v~~~~~l~~~~--f~eGit~~g~~lyvltw~~~~v~v~D~~tl~ 97 (266)
T 2iwa_A 20 YAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY--FGEGLTLLNEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp TCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC--CEEEEEEETTEEEEEETTCSEEEEEETTTTE
T ss_pred CCCCCEEEECCCCEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCC--EEEEEEECCCEEEEEECCCCEEEEECCCCCE
T ss_conf 54354289928999999799988577999989889599999569870--7799972599899998338857997287765
Q ss_pred EEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEE-EECCC
Q ss_conf 36772377763148787378758999705897999985689588999706776776674008999699899999-74698
Q T0558 86 LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP-LFATS 164 (294)
Q Consensus 86 ~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~-g~~d~ 164 (294)
+.........+ ...+++||+.++++.+.+.+..++..+.++............. . ......++|+.+++ .....
T Consensus 98 ~i~~~~~~~~~--Gwglt~dg~~L~vSdGs~~l~~iD~~t~~v~~~I~v~~~~~~~-~--~lneLe~~~g~iyan~~~~~ 172 (266)
T 2iwa_A 98 NIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRV-I--RLNELEYINGEVWANIWQTD 172 (266)
T ss_dssp EEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEEC-C--CEEEEEEETTEEEEEETTSS
T ss_pred EEEEEECCCCC--CEEECCCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCC-C--CCCCEEEECCEEEEEECCCC
T ss_conf 88887258987--3699149999999879971899738887077899983699422-3--42002771687999634798
Q ss_pred EEEEEECC-CCEEEEEEC--------------CCEEEEEEEECCCCEEEECC
Q ss_conf 89999378-858898516--------------97348988734896899735
Q T0558 165 EVREIAPN-GQLLNSVKL--------------SGTPFSSAFLDNGDCLVACG 201 (294)
Q Consensus 165 ~i~~~d~~-g~~~~~~~~--------------~~~~~~~~~~~~g~~~v~~~ 201 (294)
.|.+.|+. |+.+..... .+..+++++.|+++.++.++
T Consensus 173 ~I~~ID~~TG~V~~~id~~~l~~~~~~~~~~~~~VlNGIA~dp~~~~l~VTG 224 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCCCHHCCCCCCCCCCCEEEEEEECCCCEEEEEE
T ss_conf 5999989999599999876650120334587666106687818999899996
No 158
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, calcium, cytoplasm; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.97 E-value=3.7e-06 Score=60.39 Aligned_cols=211 Identities=12% Similarity=0.101 Sum_probs=141.4
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEECCEEEEEECCCCCEEEEECC----CCCCE
Q ss_conf 88589997479869999887882999994499873116479079839984188289975267703677237----77631
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAP----AGCEM 97 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~~~v~~~~~~~~~~~~~~~~----~~~~v 97 (294)
.+.++.+--..++|+-||.+++++. .+..+ ..+..+++.++|.+++.....+..++..++........ .....
T Consensus 24 ~~~l~~vDi~~~~i~r~d~~~~~~~-~~~~~--~~~~~~~~~~~g~li~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~r~ 100 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMD--APVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATVDNDKKNNRF 100 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEE-EEECS--SCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEECCTTCSSEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCCEE-EEECC--CCEEEEEEECCCCEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCC
T ss_conf 9999999888999999989999389-99789--98137879469988851489469976378557887302588767897
Q ss_pred EEEEECCCCCEEEEEECC----------CCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE-ECCCEE
Q ss_conf 487873787589997058----------979999856895889997067767766740089996998999997-469889
Q T0558 98 QTARILPDGNALVAWCGH----------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL-FATSEV 166 (294)
Q Consensus 98 ~~~~~~~dg~~l~~~s~~----------~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g-~~d~~i 166 (294)
..+.+.|+|.+.+..-.. ...+.....+|++..... .....+.++++||++.|+.. +..+.|
T Consensus 101 ND~~vd~~G~~~~~~~~~~~~~~~~~~~~g~l~~~~~~g~v~~v~~-------~~~~pNGia~spD~~~lyv~ds~~~~i 173 (297)
T 3g4e_A 101 NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD-------QVDISNGLDWSLDHKIFYYIDSLSYSV 173 (297)
T ss_dssp EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-------EESBEEEEEECTTSCEEEEEEGGGTEE
T ss_pred CCEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEC-------CCCCCCCEEECCCCCEEEEECCCCCEE
T ss_conf 7657812898511245433476643258835999848995799865-------775224338858877699813788569
Q ss_pred EEEECC---CCEE----E-EE-ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEE
Q ss_conf 999378---8588----9-85-1697348988734896899735898799998789859998448876411411345348
Q T0558 167 REIAPN---GQLL----N-SV-KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLF 237 (294)
Q Consensus 167 ~~~d~~---g~~~----~-~~-~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (294)
+.|+.. +... + .. ...+.|-...+-.+|+++++.-.++.+..++..+|+++.++...... +++..
T Consensus 174 ~~~~~~~~~~~~~~~r~~~~~~~~~g~PDG~~vD~~GnlwvA~~~~g~v~~~~p~~G~~l~~I~~P~~~------~tn~~ 247 (297)
T 3g4e_A 174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDK------TTSCC 247 (297)
T ss_dssp EEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSB------EEEEE
T ss_pred EEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCC------EEEEE
T ss_conf 999832535774687067640788756774599389999999817998999979988489999799997------58879
Q ss_pred E-CCCCC-EEEEE
Q ss_conf 9-38998-99980
Q T0558 238 P-LQNGG-LYICN 248 (294)
Q Consensus 238 ~-~~~G~-i~i~~ 248 (294)
+ .+|++ ++|+.
T Consensus 248 FGG~d~~~LyiTs 260 (297)
T 3g4e_A 248 FGGKNYSEMYVTC 260 (297)
T ss_dssp EESGGGCEEEEEE
T ss_pred EECCCCCEEEEEE
T ss_conf 9758999999997
No 159
>2ghs_A AGR_C_1268P; 15155668, calcium-binding protein, regucalcin, structural genomics, joint center for structural genomics, JCSG; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.95 E-value=4.5e-06 Score=59.74 Aligned_cols=210 Identities=10% Similarity=-0.005 Sum_probs=140.6
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEECCEEEEEECCCCCEEEEECC----CCCCE
Q ss_conf 88589997479869999887882999994499873116479079839984188289975267703677237----77631
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAP----AGCEM 97 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~~~v~~~~~~~~~~~~~~~~----~~~~v 97 (294)
.+.++.+....++|+.||.++++.. .+.++ ..+..+++.+||.+++....++..++..++........ ....+
T Consensus 60 ~g~L~wvDi~~~~I~r~dp~~g~~~-~~~~p--~~~~~ia~~~dg~llva~~~Gl~~~d~~~g~~~~~~~~~~~~~~~~~ 136 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKT-VHALP--FMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAELESDLPGNRS 136 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEE-EEECS--SCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSTTCTTEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCEEE-EEECC--CCCEEEEEECCCCEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCC
T ss_conf 9999999878999999989999699-99899--98179999669989999889459970542447887401467777865
Q ss_pred EEEEECCCCCEEEEEECC----CCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEE-EECCCEEEEEECC
Q ss_conf 487873787589997058----97999985689588999706776776674008999699899999-7469889999378
Q T0558 98 QTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP-LFATSEVREIAPN 172 (294)
Q Consensus 98 ~~~~~~~dg~~l~~~s~~----~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~-g~~d~~i~~~d~~ 172 (294)
..+.+.|+|++.+..... ....++....|+...... .....+.+.+++|++.++. .+..+.|+.++.+
T Consensus 137 nd~~vd~~G~lw~~~~~~~~~~~~g~l~~~~~g~~~~~~~-------~~~~pNGi~~s~dg~~ly~~dt~~~~I~~~~~d 209 (326)
T 2ghs_A 137 NDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEE-------EECCCCCEEECCCCCEEEEEECCCCEEEEEEEE
T ss_conf 5406989999998035521237852588723992899987-------303676304858787689950468715899986
Q ss_pred CC-------E-EEEE--ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEE-CCC
Q ss_conf 85-------8-8985--16973489887348968997358987999987898599984488764114113453489-389
Q T0558 173 GQ-------L-LNSV--KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFP-LQN 241 (294)
Q Consensus 173 g~-------~-~~~~--~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 241 (294)
.. . .+.. .....|.+..+-.+|+++++.-.+++|..+|.. |+++.++...... +++..+ .+|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~g~pdGl~vD~~GnlWVa~~~~g~V~~~dpd-G~~i~~i~lP~~~------~T~~~FgG~d 282 (326)
T 2ghs_A 210 ARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYEVPGKQ------TTCPAFIGPD 282 (326)
T ss_dssp TTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEECSCSB------EEEEEEESTT
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCC-CCEEEEEECCCCC------EEEEEEECCC
T ss_conf 67894426446887557888899616788999899989489989999899-9799999899995------4798983799
Q ss_pred CC-EEEEE
Q ss_conf 98-99980
Q T0558 242 GG-LYICN 248 (294)
Q Consensus 242 G~-i~i~~ 248 (294)
++ ++|+.
T Consensus 283 ~~~LyVTs 290 (326)
T 2ghs_A 283 ASRLLVTS 290 (326)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
T ss_conf 99999995
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.92 E-value=5.5e-06 Score=59.14 Aligned_cols=228 Identities=11% Similarity=0.047 Sum_probs=116.1
Q ss_pred CCCEEEEECC--CCEEEE--EECCCCEEEE--EEECCCCCCCCEEEEECCCCEEEEE-CCEEEEEEC--CCCCEEEEECC
Q ss_conf 8858999747--986999--9887882999--9944998731164790798399841-882899752--67703677237
Q T0558 22 PQHLLVGGSG--WNKIAI--INKDTKEIVW--EYPLEKGWECNSVAATKAGEILFSY-SKGAKMITR--DGRELWNIAAP 92 (294)
Q Consensus 22 ~~~~l~~gs~--~~~i~~--~d~~tg~~~w--~~~~~~~~~~~~~~~~pdG~~l~s~-~~~v~~~~~--~~~~~~~~~~~ 92 (294)
|.+.|++|+. .+.|+. +|.+++++.- +........+.-++++||+++|++. .+.+..+.. +++........
T Consensus 1 ~~~~l~vGtyt~~~~I~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~~~~~~~lY~~~~g~~~~f~i~~~~~l~~~~~~~ 80 (365)
T 1jof_A 1 PLHHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp CEEEEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEECC
T ss_conf 93399999416999899999848999388834554168899767999189999999908927999992899779865125
Q ss_pred CCCCEEEEEECCCCCEE--EEEECCC-CEEEE-ECCCCCEEEEEECCCC----------CCCCCCCCCEEEECCCCCEEE
Q ss_conf 77631487873787589--9970589-79999-8568958899970677----------677667400899969989999
Q T0558 93 AGCEMQTARILPDGNAL--VAWCGHP-STILE-VNMKGEVLSKTEFETG----------IERPHAQFRQINKNKKGNYLV 158 (294)
Q Consensus 93 ~~~~v~~~~~~~dg~~l--~~~s~~~-~~~~~-~~~~G~~~~~~~~~~~----------~~~~~~~~~~~~~s~dG~~i~ 158 (294)
.......+.++++|+.+ +.+.... .+... ....+.....+.+... ..........+.++|||++++
T Consensus 81 ~g~~p~~~~v~~~g~~~~v~~any~~~sv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rq~~~h~H~v~~spdg~~l~ 160 (365)
T 1jof_A 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred CCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEE
T ss_conf 89986148988799868999904799679974635688731068750255226774675557899430789889999999
Q ss_pred EEE-CCCEEEEEE--CCCCEEE--EE---ECCCEEEEEEEECCCCEE-EECCCCCEEEEEECCCC--EEEEEECCC----
Q ss_conf 974-698899993--7885889--85---169734898873489689-97358987999987898--599984488----
Q T0558 159 PLF-ATSEVREIA--PNGQLLN--SV---KLSGTPFSSAFLDNGDCL-VACGDAHCFVQLNLESN--RIVRRVNAN---- 223 (294)
Q Consensus 159 ~g~-~d~~i~~~d--~~g~~~~--~~---~~~~~~~~~~~~~~g~~~-v~~~~~~~i~~~d~~~g--~~~~~~~~~---- 223 (294)
+.. ....|++|+ .++.... .. ..+..|..+.++|+|+++ +..-.++.|.+++..++ ......+..
T Consensus 161 v~dlg~d~v~~y~~~~~g~l~~~~~~~~~~~G~gPrhi~f~pdg~~lYv~~E~s~~V~v~~~~~~~~~~~~~~~~~~~~~ 240 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEECCCCEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCC
T ss_conf 95079898999980898845754520025899985588987999899996468998999998189881778764414557
Q ss_pred -C------CCCEEECCCCCEEECCCCCE-EEEEC
Q ss_conf -7------64114113453489389989-99804
Q T0558 224 -D------IEGVQLFFVAQLFPLQNGGL-YICNW 249 (294)
Q Consensus 224 -~------~~~~~~~~~~~~~~~~~G~i-~i~~~ 249 (294)
. ...........+...+||++ ++.|.
T Consensus 241 ~~~~~~~~~~~~~~~~~a~I~lspdG~~lyvsnR 274 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEC
T ss_conf 7655566655677743228999689998999703
No 161
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.90 E-value=2.9e-09 Score=83.03 Aligned_cols=184 Identities=8% Similarity=-0.034 Sum_probs=114.3
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCC-EEEEECCCCEEE-EECCEEEEEECCC-CCEEEEECCCCCCEE
Q ss_conf 8858999747986999988788299999449987311-647907983998-4188289975267-703677237776314
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECN-SVAATKAGEILF-SYSKGAKMITRDG-RELWNIAAPAGCEMQ 98 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~-~~~~~pdG~~l~-s~~~~v~~~~~~~-~~~~~~~~~~~~~v~ 98 (294)
.+..++.++.++.++++|.++|+.+|+++......+. +.....|+.++. +.++.++.++... +..|.+.....
T Consensus 48 ~~~~v~~~~~dG~ly~ld~~tg~~~~~~~~~~~~~v~~s~~~~~d~~~~~g~~~~~~~~~d~~tG~~~~~~~~~~~---- 123 (369)
T 2hz6_A 48 EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---- 123 (369)
T ss_dssp --CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC-----------------
T ss_pred ECCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCEECCCEEECCCEEEEECCCCCEEEEECCCCCEEEEECCCCC----
T ss_conf 4999999889997999989999888985267897042243087697799734899488776289868887546777----
Q ss_pred EEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEE
Q ss_conf 87873787589997058979999856895889997067767766740089996998999997469889999378-85889
Q T0558 99 TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 177 (294)
Q Consensus 99 ~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~ 177 (294)
....+.++.++.+.....+.+++..+|+.+|++........... .....+..+++++.++.++.+|.+ |+.+|
T Consensus 124 -~~~~~~~~~~~~g~~~~~~~a~d~~tG~~~W~~~~~~~~~~~~~-----~~~~~~~~~~~~~~dg~l~alD~~tG~~lW 197 (369)
T 2hz6_A 124 -DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPE-----DDVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp ----------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCC-----CCTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred -CCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCC-----CCCCCCCEEEEECCCCEEEEEECCCCCEEE
T ss_conf -64233454103046520246677799988898885775687655-----420168569980688749999999997999
Q ss_pred EEECCCEEEEEEEE-CCCCEEEE--CCCCCEEEEEECCCCE
Q ss_conf 85169734898873-48968997--3589879999878985
Q T0558 178 SVKLSGTPFSSAFL-DNGDCLVA--CGDAHCFVQLNLESNR 215 (294)
Q Consensus 178 ~~~~~~~~~~~~~~-~~g~~~v~--~~~~~~i~~~d~~~g~ 215 (294)
+...+.++.++... .+|...+. ...++.++.++..+|+
T Consensus 198 ~~~~~spi~~~~~~~~dg~~~v~~~~~~~~~~~~~~~~~g~ 238 (369)
T 2hz6_A 198 IQNYASPVVAFYVWQREGLRKVMHINVAVETLRYLTFMSGE 238 (369)
T ss_dssp EEECSSCEEEEEECTTSSCEEECCEEEEHHHHHHHHHHHHH
T ss_pred EEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCC
T ss_conf 98389983888877389828864623566718987416887
No 162
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, enzyme mechanism, virginiamycin B hydrolase, streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.89 E-value=7.1e-06 Score=58.34 Aligned_cols=228 Identities=11% Similarity=0.101 Sum_probs=132.5
Q ss_pred EEEEECC-CCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 9999449-98731164790798399841--88289975267703677237776314878737875899970589799998
Q T0558 46 VWEYPLE-KGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEV 122 (294)
Q Consensus 46 ~w~~~~~-~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~ 122 (294)
++++.+. ....++.++++|||++.++. ++.+..++.+++............++++++.++|+..++..........
T Consensus 5 ~~~~~~~~~~~~P~~ia~d~dG~lwv~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~- 83 (299)
T 2z2n_A 5 LQELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRI- 83 (299)
T ss_dssp EEEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE-
T ss_pred EEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEE-
T ss_conf 9998769999980499999999999998899999999699999999935889975799998999999998477413652-
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEE--CCCEEEEEEEECCCCEEEEC
Q ss_conf 5689588999706776776674008999699899999746988999937885889851--69734898873489689973
Q T0558 123 NMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVK--LSGTPFSSAFLDNGDCLVAC 200 (294)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~~~~~--~~~~~~~~~~~~~g~~~v~~ 200 (294)
...+........ ........++..+++...+.......+...+..+....... ....|..+...+++..++..
T Consensus 84 ~~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 158 (299)
T 2z2n_A 84 TKKGIIKEYTLP-----NPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp CTTSCEEEEECS-----STTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEECC-----CCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCEEEEECCCCCCCCCEEEECCCCEEEEEC
T ss_conf 135751466517-----999995139985440102203430135445304625774023457885278713661389732
Q ss_pred CCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEE----------C---CCCCCCEEEEE
Q ss_conf 5898799998789859998448876411411345348938998999804677143----------0---24777569999
Q T0558 201 GDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDRE----------A---GKGKHPQLVEI 267 (294)
Q Consensus 201 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~----------~---~~~~~~~~~~i 267 (294)
...+.+..++................. ..+...++|++++....+..+. . .....+..+++
T Consensus 159 ~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 232 (299)
T 2z2n_A 159 NQNNAIGRITESGDITEFKIPTPASGP------VGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITA 232 (299)
T ss_dssp TTTTEEEEECTTCCEEEEECSSTTCCE------EEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEE
T ss_pred CCCCEEEEECCCCCEEEEECCCCCCCC------EEEEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCCCEEEEEE
T ss_conf 899869999799987998515554332------04777799979999757986999979998899973588752147898
Q ss_pred CCCCCEEEEEE-CCCCEEEE
Q ss_conf 08998999983-58853788
Q T0558 268 DSEGKVVWQLN-DKVKFGMI 286 (294)
Q Consensus 268 ~~~G~~vW~~~-~~~~~~~i 286 (294)
+++|++ |--. ....+.++
T Consensus 233 d~~G~l-wv~~~~~~~i~~~ 251 (299)
T 2z2n_A 233 GAGIDL-WFTEWGANKIGRL 251 (299)
T ss_dssp CSTTCE-EEEETTTTEEEEE
T ss_pred CCCCCE-EEEECCCCEEEEE
T ss_conf 799989-9999389989999
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.88 E-value=6.8e-06 Score=58.46 Aligned_cols=234 Identities=14% Similarity=0.045 Sum_probs=117.7
Q ss_pred HHCCCCCCCCEEEEECCCCEEEEEECC-CCEEEEEEECCCCCCCCEEEEECCCCEEE--EE---CCEEEEEEC--CCCC-
Q ss_conf 200147888589997479869999887-88299999449987311647907983998--41---882899752--6770-
Q T0558 15 PFAQGSSPQHLLVGGSGWNKIAIINKD-TKEIVWEYPLEKGWECNSVAATKAGEILF--SY---SKGAKMITR--DGRE- 85 (294)
Q Consensus 15 ~~~~~s~~~~~l~~gs~~~~i~~~d~~-tg~~~w~~~~~~~~~~~~~~~~pdG~~l~--s~---~~~v~~~~~--~~~~- 85 (294)
.+...+++.++|.+.+. +.+..+..+ .++++.......+.....+++++||+.++ .. +..+..+.. .+..
T Consensus 43 s~la~~~~~~~lY~~~~-g~~~~f~i~~~~~l~~~~~~~~g~~p~~~~v~~~g~~~~v~~any~~~sv~~~~~~~~~~~~ 121 (365)
T 1jof_A 43 SWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYG 121 (365)
T ss_dssp SEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEE
T ss_pred CEEEECCCCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCC
T ss_conf 67999189999999908-92799999289977986512589986148988799868999904799679974635688731
Q ss_pred --------------EEEEECCCCCCEEEEEECCCCCEEEEEEC-CCCEEE-EECCCCCEEEEEECCCCCCCCCCCCCEEE
Q ss_conf --------------36772377763148787378758999705-897999-98568958899970677677667400899
Q T0558 86 --------------LWNIAAPAGCEMQTARILPDGNALVAWCG-HPSTIL-EVNMKGEVLSKTEFETGIERPHAQFRQIN 149 (294)
Q Consensus 86 --------------~~~~~~~~~~~v~~~~~~~dg~~l~~~s~-~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 149 (294)
...........++++.++|||++++++.. .+.+.+ .+..+|++...-..... .....-+++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~rq~~~h~H~v~~spdg~~l~v~dlg~d~v~~y~~~~~g~l~~~~~~~~~--~~G~gPrhi~ 199 (365)
T 1jof_A 122 NVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP--DPGDHPRWVA 199 (365)
T ss_dssp EEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS--STTCCEEEEE
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCC--CCCCCCEEEE
T ss_conf 06875025522677467555789943078988999999995079898999980898845754520025--8999855889
Q ss_pred ECCCCCEEEEE-ECCCEEEEEECC---CCEEEEEEC------------------CCEEEEEEEECCCCEEEECCCC----
Q ss_conf 96998999997-469889999378---858898516------------------9734898873489689973589----
Q T0558 150 KNKKGNYLVPL-FATSEVREIAPN---GQLLNSVKL------------------SGTPFSSAFLDNGDCLVACGDA---- 203 (294)
Q Consensus 150 ~s~dG~~i~~g-~~d~~i~~~d~~---g~~~~~~~~------------------~~~~~~~~~~~~g~~~v~~~~~---- 203 (294)
|+|||+++++. ..+++|.+++.+ +..+..... ...+-.+.++|||+++++...+
T Consensus 200 f~pdg~~lYv~~E~s~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~I~lspdG~~lyvsnRg~~~~ 279 (365)
T 1jof_A 200 MHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFE 279 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTT
T ss_pred ECCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCC
T ss_conf 87999899996468998999998189881778764414557765556665567774322899968999899970377877
Q ss_pred --CEEEEEEC-CCCEEEEEECCCCCCCEEECCCCCEEECC-CCC-EEEEECCCC
Q ss_conf --87999987-89859998448876411411345348938-998-999804677
Q T0558 204 --HCFVQLNL-ESNRIVRRVNANDIEGVQLFFVAQLFPLQ-NGG-LYICNWQGH 252 (294)
Q Consensus 204 --~~i~~~d~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~-i~i~~~~~~ 252 (294)
+.+..+.. ++|.+.........+. .-.....+.+.+ +|+ +++.+....
T Consensus 280 ~~~~ia~f~~~~~g~l~~~~~~~~~~~-~G~~pr~~~~~p~~g~~l~van~~s~ 332 (365)
T 1jof_A 280 LQGYIAGFKLRDCGSIEKQLFLSPTPT-SGGHSNAVSPCPWSDEWMAITDDQEG 332 (365)
T ss_dssp SCCEEEEEEECTTSCEEEEEEEEECSS-CCTTCCCEEECTTCTTEEEEECSSSC
T ss_pred CCCEEEEEEECCCCCEEEEEEEEEEEC-CCCCCCEEEEECCCCCEEEEEECCCC
T ss_conf 751389999579982567777667655-78987666860899999999968999
No 164
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI-2, protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.88 E-value=7.8e-06 Score=58.03 Aligned_cols=187 Identities=14% Similarity=0.065 Sum_probs=98.4
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEECC--EEEEEECCCCCEEEEEC----CCCCC
Q ss_conf 8589997479869999887882999994499873116479079839984188--28997526770367723----77763
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSK--GAKMITRDGRELWNIAA----PAGCE 96 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~~--~v~~~~~~~~~~~~~~~----~~~~~ 96 (294)
+.++.+-...++|+.|+.+++... +. .....+..+++.++|.++++..+ .+...+..++....... .....
T Consensus 40 ~~L~~vDi~~~~I~r~~~~g~~~~--~~-~~~~~~~gl~~~~~g~l~v~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~ 116 (296)
T 3e5z_A 40 SAVIFSDVRQNRTWAWSDDGQLSP--EM-HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNS 116 (296)
T ss_dssp TEEEEEEGGGTEEEEEETTSCEEE--EE-SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCC
T ss_pred CEEEEEECCCCEEEEEECCCCEEE--EE-ECCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCC
T ss_conf 999999867998999948999899--99-437864798997899899997078506664079984999975245887688
Q ss_pred EEEEEECCCCCEEEEEEC----------------CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE
Q ss_conf 148787378758999705----------------8979999856895889997067767766740089996998999997
Q T0558 97 MQTARILPDGNALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 160 (294)
Q Consensus 97 v~~~~~~~dg~~l~~~s~----------------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g 160 (294)
...+.+.|+|.+.+.... ....+......|+..... ......+.++++|||+++++-
T Consensus 117 ~ND~~vdp~G~l~~~d~~~~~~~~~~~~~~~~~~~~g~vy~~~~~g~~~~~~-------~~~~~pNGia~s~Dg~ly~~D 189 (296)
T 3e5z_A 117 PNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPI-------RDRVKPNGLAFLPSGNLLVSD 189 (296)
T ss_dssp CCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEE-------CCCSSEEEEEECTTSCEEEEE
T ss_pred CCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEE-------EECCCCCCEEECCCCCEEEEC
T ss_conf 7656986899999633556765632354420036751089986899689998-------611245734765888789985
Q ss_pred ECCCEEEEEEC--CCCEEEE----EECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECC
Q ss_conf 46988999937--8858898----51697348988734896899735898799998789859998448
Q T0558 161 FATSEVREIAP--NGQLLNS----VKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA 222 (294)
Q Consensus 161 ~~d~~i~~~d~--~g~~~~~----~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~ 222 (294)
+..+.|+.|+. +|..... ....+.|-.+.+-.+|++++++.. .|.+++. +|+++.++..
T Consensus 190 s~~~~i~~~~~~~~g~~~~~~~~~~~~~G~PDG~~vD~~GnlwvA~~~--gV~v~~p-~G~~~~~I~~ 254 (296)
T 3e5z_A 190 TGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGD--GVHVLTP-DGDELGRVLT 254 (296)
T ss_dssp TTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETT--EEEEECT-TSCEEEEEEC
T ss_pred CCCCEEEEEEECCCCCEEECEEEEECCCCCCCCEEECCCCEEEEECCC--EEEEECC-CCCEEEEEEC
T ss_conf 689546999996899772010568757986662698389829996899--8999969-9959889938
No 165
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.87 E-value=3.2e-06 Score=60.81 Aligned_cols=227 Identities=14% Similarity=0.166 Sum_probs=134.3
Q ss_pred CCCCCEEEEECCCCEEEEEECCCCEEEEEEECCC-C---------CCCCEEEEECCCCEEEEECC---------------
Q ss_conf 7888589997479869999887882999994499-8---------73116479079839984188---------------
Q T0558 20 SSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-G---------WECNSVAATKAGEILFSYSK--------------- 74 (294)
Q Consensus 20 s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~-~---------~~~~~~~~~pdG~~l~s~~~--------------- 74 (294)
++...++++...+++|.++|++.....-++ ... + ..+..+++.++|+++++.+.
T Consensus 22 ~~~~~~yVsd~~~~rI~vf~~~g~~~~~~~-i~~~~~~G~g~~q~~~p~GVavD~~GnL~Vv~~~~~~v~~~~~~~~~~~ 100 (334)
T 2p9w_A 22 RTRQVFYQSNLYKGRIEVYNPKTQSHFNVV-IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGAS 100 (334)
T ss_dssp TTTTEEEEEETTTTEEEEECTTTCCEEEEC-CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCC
T ss_pred CCCCEEEEECCCCCEEEEEECCCCEEEEEE-ECCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCCC
T ss_conf 899999995178997999928998378898-2255446778776235248999899949999679942898645577773
Q ss_pred EEEEEEC----CCCCEEEEEC------------CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 2899752----6770367723------------77763148787378758999705897999985689588999706776
Q T0558 75 GAKMITR----DGRELWNIAA------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGI 138 (294)
Q Consensus 75 ~v~~~~~----~~~~~~~~~~------------~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~ 138 (294)
....++. .+..+|.... +....+..+++.++|+.+++.+..+..+...+++|+.+..|......
T Consensus 101 ~l~~~~l~~~~~~~~~~~vdl~~~~~~~~~~~g~~~~~p~~iavD~~GniyV~d~~~~~~I~~~~~dG~~~~~~g~~g~~ 180 (334)
T 2p9w_A 101 SFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGN 180 (334)
T ss_dssp EEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCC
T ss_pred EEEEEEEEEECCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEECCCCCEEEEEECCCCC
T ss_conf 53356226603783689974565431350478862257640899899999995358985899995999999998427888
Q ss_pred CCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEEEE----E-----CCCEEEEEEEECCCCEEEECCCCCEEEEE
Q ss_conf 77667400899969989999974698899993788588985----1-----69734898873489689973589879999
Q T0558 139 ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSV----K-----LSGTPFSSAFLDNGDCLVACGDAHCFVQL 209 (294)
Q Consensus 139 ~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~g~~~~~~----~-----~~~~~~~~~~~~~g~~~v~~~~~~~i~~~ 209 (294)
.+.....+.+++.++|.++++...+++|.++|.+++..+.. . ........+.-.++..++.+.....++.+
T Consensus 181 ~g~~~~p~Gia~d~~g~i~Vad~~~~~l~~fd~~~~~~~~~~v~~~g~~g~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~ 260 (334)
T 2p9w_A 181 GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISF 260 (334)
T ss_dssp SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred CCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEE
T ss_conf 87643422179838997899858998599995888877538886047876557744202642598199996698868999
Q ss_pred ECCCC----EEEEEECCCCCCCEEECCCCCEEECCCCCEEEEE
Q ss_conf 87898----5999844887641141134534893899899980
Q T0558 210 NLESN----RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 248 (294)
Q Consensus 210 d~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~ 248 (294)
-...+ +++... ..........++.......++++++.+
T Consensus 261 ~s~D~W~~A~~~~~~-~~~~~~~~~~~~t~~~~~~~~~iy~~~ 302 (334)
T 2p9w_A 261 RSWDNWKSANIKKTK-RSELQNSGFTAVADYYQGSEQGLYAVS 302 (334)
T ss_dssp ECSSTTSEEEEEEEE-CGGGGSSCEEEEEEEEETTEEEEEEEE
T ss_pred ECCCCCCEEEECCEE-CCCCCCCCCCCCCEEEECCCCCEEEEE
T ss_conf 805872152422270-585336786533145673778689965
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI-2, protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.82 E-value=1.2e-05 Score=56.76 Aligned_cols=205 Identities=14% Similarity=0.061 Sum_probs=129.1
Q ss_pred EEEEECC-CCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECC
Q ss_conf 6479079-8399841--882899752677036772377763148787378758999705897999985689588999706
Q T0558 59 SVAATKA-GEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFE 135 (294)
Q Consensus 59 ~~~~~pd-G~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~ 135 (294)
.+.+.++ +.+++++ .+.++.|+.+++.. .+.. .......+.+.++|..+++......+...+..+|+........
T Consensus 32 GPvw~~~~~~L~~vDi~~~~I~r~~~~g~~~-~~~~-~~~~~~gl~~~~~g~l~v~~~~~~~~~~~~~~~g~~~~l~~~~ 109 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQNRTWAWSDDGQLS-PEMH-PSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSF 109 (296)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTSCEE-EEES-SCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEE
T ss_pred CCEEECCCCEEEEEECCCCEEEEEECCCCEE-EEEE-CCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEECC
T ss_conf 1889899999999986799899994899989-9994-3786479899789989999707850666407998499997524
Q ss_pred CCCCCCCCCCCEEEECCCCCEEEEEEC-----------------CCEEEEEECCCCEEEEEECCCEEEEEEEECCCCEEE
Q ss_conf 776776674008999699899999746-----------------988999937885889851697348988734896899
Q T0558 136 TGIERPHAQFRQINKNKKGNYLVPLFA-----------------TSEVREIAPNGQLLNSVKLSGTPFSSAFLDNGDCLV 198 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~s~dG~~i~~g~~-----------------d~~i~~~d~~g~~~~~~~~~~~~~~~~~~~~g~~~v 198 (294)
. .......+.+.+.|+|++.++... .+.++.++.+++.......-..|..+.++++|+.|+
T Consensus 110 ~--~~~~~~~ND~~vdp~G~l~~~d~~~~~~~~~~~~~~~~~~~~g~vy~~~~~g~~~~~~~~~~~pNGia~s~Dg~ly~ 187 (296)
T 3e5z_A 110 E--GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLV 187 (296)
T ss_dssp T--TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEE
T ss_pred C--CCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEECCCCCEEE
T ss_conf 5--88768876569868999996335567656323544200367510899868996899986112457347658887899
Q ss_pred ECCCCCEEEEEECC-CCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCEEEEE
Q ss_conf 73589879999878-98599984488764114113453489389989998046771430247775699990899899998
Q T0558 199 ACGDAHCFVQLNLE-SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQL 277 (294)
Q Consensus 199 ~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~vW~~ 277 (294)
+.+..+.++.++.. .|++..+....... ...+-++...++|+++++.+. .+..++++|+++=.+
T Consensus 188 ~Ds~~~~i~~~~~~~~g~~~~~~~~~~~~---~G~PDG~~vD~~GnlwvA~~~------------gV~v~~p~G~~~~~I 252 (296)
T 3e5z_A 188 SDTGDNATHRYCLNARGETEYQGVHFTVE---PGKTDGLRVDAGGLIWASAGD------------GVHVLTPDGDELGRV 252 (296)
T ss_dssp EETTTTEEEEEEECSSSCEEEEEEEECCS---SSCCCSEEEBTTSCEEEEETT------------EEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEEEECCCCCEEECEEEEECC---CCCCCCEEECCCCEEEEECCC------------EEEEECCCCCEEEEE
T ss_conf 85689546999996899772010568757---986662698389829996899------------899996999598899
Q ss_pred ECCCC
Q ss_conf 35885
Q T0558 278 NDKVK 282 (294)
Q Consensus 278 ~~~~~ 282 (294)
.-..+
T Consensus 253 ~~p~~ 257 (296)
T 3e5z_A 253 LTPQT 257 (296)
T ss_dssp ECSSC
T ss_pred ECCCC
T ss_conf 38997
No 167
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.80 E-value=1.4e-05 Score=56.24 Aligned_cols=237 Identities=10% Similarity=0.007 Sum_probs=126.4
Q ss_pred CCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEE---E--CC--EEEEEECCCCCEEEEECCCCCCEEEEEEC
Q ss_conf 79869999887882999994499873116479079839984---1--88--28997526770367723777631487873
Q T0558 31 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS---Y--SK--GAKMITRDGRELWNIAAPAGCEMQTARIL 103 (294)
Q Consensus 31 ~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s---~--~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~~~ 103 (294)
....|+++|..+|+...- .+ ..++.|+|||+.|+- . ++ .+++.+..+++..+.... ..+....|+
T Consensus 41 ~~~~i~~~d~~~~~~~~~--t~----~~~P~wSPDG~~laf~s~~~~~~~~~l~~~~~~gg~~~~l~~~--~~~~~~~ws 112 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI--EN----ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA--KNIRSLEWN 112 (347)
T ss_dssp EEEEEEEEETTTCCEEEE--ES----CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE--SEEEEEEEC
T ss_pred CCEEEEEEECCCCCEEEC--CC----CCCEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEECC--CCEEEEEEC
T ss_conf 410799998999808877--79----9846988799999999974799965999998888845985417--841444788
Q ss_pred CCCCEEEEEECCCC---------------------------EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCE
Q ss_conf 78758999705897---------------------------999985689588999706776776674008999699899
Q T0558 104 PDGNALVAWCGHPS---------------------------TILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY 156 (294)
Q Consensus 104 ~dg~~l~~~s~~~~---------------------------~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~ 156 (294)
|||+.++....... +..++...++....... .......+++++.+
T Consensus 113 pDg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~i 184 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--------PRFSSGIWHRDKIV 184 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--------ETTCEEEEETTEEE
T ss_pred CCCCEEEEEEECCCCCCCCEEEEECCCCCCCCEEEECCCCEEEEEECCCCEEEECCCC--------CCCCCCEEECCCEE
T ss_conf 9999899998214665442013301222354137761554057760645705753566--------73023357119879
Q ss_pred EEEEECCCE------EEEEECCCCEEEEEECCCEEEEEEEECCCCEEEECCCC------CEEEEEECCCCEEEEEECCCC
Q ss_conf 999746988------99993788588985169734898873489689973589------879999878985999844887
Q T0558 157 LVPLFATSE------VREIAPNGQLLNSVKLSGTPFSSAFLDNGDCLVACGDA------HCFVQLNLESNRIVRRVNAND 224 (294)
Q Consensus 157 i~~g~~d~~------i~~~d~~g~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~------~~i~~~d~~~g~~~~~~~~~~ 224 (294)
+++...+.. ...++..+....... .......++|+|+.++..+.+ ..+.+++..+++...-....+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 262 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWEDGKEEKMF--EKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYDGKEVMGILDEVD 262 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEETTEEEEEE--EEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEECSSCEEESSTTCC
T ss_pred EEEEECCCCCCEEEEEEEEEECCCCEEEEE--EEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEECCCCC
T ss_conf 999817997110244478860256247876--520023346889999999757778875524999658983688516899
Q ss_pred CCCEEECCCCC-EE--ECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 64114113453-48--9389989998046771430247775699990899899998358853788
Q T0558 225 IEGVQLFFVAQ-LF--PLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMI 286 (294)
Q Consensus 225 ~~~~~~~~~~~-~~--~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~vW~~~~~~~~~~i 286 (294)
..........+ +. ...+|...++..++... ........+..++.+|++++........+.+
T Consensus 263 ~~~~~~~~~~~~i~~~~~~~g~~~l~~~dG~~~-~v~~~~~~v~~~s~d~~~~~~~~~~~~p~el 326 (347)
T 2gop_A 263 RGVGQAKIKDGKVYFTLFEEGSVNLYIWDGEIK-PIAKGRHWIMGFDVDEIVVYLKETATRLREL 326 (347)
T ss_dssp SEEEEEEEETTEEEEEEEETTEEEEEEESSSEE-EEECSSSEEEEEEESSSEEEEEECSSSCCEE
T ss_pred CCEEEEEECCCEEEEEEECCCEEEEEECCCCEE-EEECCCCCEEEECCCCCEEEEEECCCCCCEE
T ss_conf 746667946998999994699899999299489-9977995199887499499999079995589
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.78 E-value=1.6e-05 Score=55.80 Aligned_cols=198 Identities=12% Similarity=-0.013 Sum_probs=111.9
Q ss_pred HCCCCCCCCEEEEECC---CCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--CCEEEEEECCCCCEEEEE
Q ss_conf 0014788858999747---98699998878829999944998731164790798399841--882899752677036772
Q T0558 16 FAQGSSPQHLLVGGSG---WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIA 90 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~---~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~~~v~~~~~~~~~~~~~~ 90 (294)
..+.|++++.|+-.|. ...|+++|.++|+.. +..-.+........++|||+.++.. +..++.++..++......
T Consensus 40 ~~a~SPDG~~laf~s~~~g~~~l~~~dl~~g~~~-~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~g~~~~~~ 118 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIY 118 (396)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEE-EEECCCCCCEECCEECCCCCEEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 7109999998999981699918999999999889-977389997754088499849999778996189986889478898
Q ss_pred CCCC--CCEEEEEECCCCCEEEEEE----------------------CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 3777--6314878737875899970----------------------589799998568958899970677677667400
Q T0558 91 APAG--CEMQTARILPDGNALVAWC----------------------GHPSTILEVNMKGEVLSKTEFETGIERPHAQFR 146 (294)
Q Consensus 91 ~~~~--~~v~~~~~~~dg~~l~~~s----------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 146 (294)
.... .........+++..++... .+..+...+..+|+...... ......
T Consensus 119 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-------~~~~~~ 191 (396)
T 3c5m_A 119 TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-------DTAWLG 191 (396)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-------ESSCEE
T ss_pred ECCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEC-------CCCCCC
T ss_conf 5355778763031178755054011347664171345663047860798449999679993788753-------885200
Q ss_pred EEEECCCCCEEEEEEC-------CCEEEEEECCCCEEEEEEC---CCEEEEEEEECCCCEEEEC-----CCCCEEEEEEC
Q ss_conf 8999699899999746-------9889999378858898516---9734898873489689973-----58987999987
Q T0558 147 QINKNKKGNYLVPLFA-------TSEVREIAPNGQLLNSVKL---SGTPFSSAFLDNGDCLVAC-----GDAHCFVQLNL 211 (294)
Q Consensus 147 ~~~~s~dG~~i~~g~~-------d~~i~~~d~~g~~~~~~~~---~~~~~~~~~~~~g~~~v~~-----~~~~~i~~~d~ 211 (294)
...+++++..++.... +..+.+++.++...+.... ........++|+|+.++.. ..+..++.++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~~~i~~~~~ 271 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANP 271 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECT
T ss_pred CEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCEEEEEEECCCCCCEEEEEEEC
T ss_conf 10345888539999702777665306999755898328987037864446264989998689985148987569999968
Q ss_pred CCCEEEEEEC
Q ss_conf 8985999844
Q T0558 212 ESNRIVRRVN 221 (294)
Q Consensus 212 ~~g~~~~~~~ 221 (294)
.+++......
T Consensus 272 ~~~~~~~~~~ 281 (396)
T 3c5m_A 272 ETLENEEVMV 281 (396)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCEEEEEE
T ss_conf 9885799880
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.74 E-value=2.1e-05 Score=54.90 Aligned_cols=174 Identities=11% Similarity=-0.006 Sum_probs=100.0
Q ss_pred EECCCCEEEEEEECCCCC-----CCCEEEEECCCCEEEE-E----CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCC
Q ss_conf 988788299999449987-----3116479079839984-1----88289975267703677237776314878737875
Q T0558 38 INKDTKEIVWEYPLEKGW-----ECNSVAATKAGEILFS-Y----SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGN 107 (294)
Q Consensus 38 ~d~~tg~~~w~~~~~~~~-----~~~~~~~~pdG~~l~s-~----~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~ 107 (294)
.|..||..+.++. .... ....++|+|||+.|+. + ...+++++.++++..+....+...+....++||++
T Consensus 15 ~~~~tg~~~~~lT-~~~~~~~~~y~~~~a~SPDG~~laf~s~~~g~~~l~~~dl~~g~~~~lt~~~~~~~~~~~~s~dg~ 93 (396)
T 3c5m_A 15 VDSDTQVKVTRLT-PTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp ECTTTCCEEEECS-CTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred EECCCCCEEEEEC-CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCEECCEECCCCC
T ss_conf 8689997689965-898875426673710999999899998169991899999999988997738999775408849984
Q ss_pred EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE----------------------ECCCE
Q ss_conf 89997058979999856895889997067767766740089996998999997----------------------46988
Q T0558 108 ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL----------------------FATSE 165 (294)
Q Consensus 108 ~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g----------------------~~d~~ 165 (294)
.++..+.+..+..++..+|+.......... .........++|+..++.. ..++.
T Consensus 94 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQVIYTVDEE----WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTT----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred EEEEECCCCCEEEEECCCCCEEEEEECCCC----CCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCE
T ss_conf 999977899618998688947889853557----7876303117875505401134766417134566304786079844
Q ss_pred EEEEECCCCEEE-EEECCCEEEEEEEECCCCEEEECC-------CCCEEEEEECCCCEE
Q ss_conf 999937885889-851697348988734896899735-------898799998789859
Q T0558 166 VREIAPNGQLLN-SVKLSGTPFSSAFLDNGDCLVACG-------DAHCFVQLNLESNRI 216 (294)
Q Consensus 166 i~~~d~~g~~~~-~~~~~~~~~~~~~~~~g~~~v~~~-------~~~~i~~~d~~~g~~ 216 (294)
+..++.++.... .............++++..++... ....+.+++..+++.
T Consensus 170 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 228 (396)
T 3c5m_A 170 LIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV 228 (396)
T ss_dssp EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC
T ss_pred EEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCE
T ss_conf 99996799937887538852001034588853999970277766530699975589832
No 170
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function, structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.72 E-value=2.3e-05 Score=54.57 Aligned_cols=227 Identities=8% Similarity=0.059 Sum_probs=127.3
Q ss_pred CCEEEEECCCCEEEEEC--CEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC
Q ss_conf 11647907983998418--8289975267703677237776314878737875899970589799998568958899970
Q T0558 57 CNSVAATKAGEILFSYS--KGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEF 134 (294)
Q Consensus 57 ~~~~~~~pdG~~l~s~~--~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~ 134 (294)
+..+++.+++.+++... ..++.++.++..+.....+.............+.+.+..........+....+........
T Consensus 133 P~giavD~~~~i~v~D~~n~rIr~i~~~~~~vtti~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQ 212 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEE
T ss_pred EEEEEEECCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCC
T ss_conf 05999959970999989999799998999899998898867877764534530477746885399998887832101375
Q ss_pred CCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEE--------CCCEEEEEEEECCCCEEEECCCCCE
Q ss_conf 67767766740089996998999997469889999378-85889851--------6973489887348968997358987
Q T0558 135 ETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVK--------LSGTPFSSAFLDNGDCLVACGDAHC 205 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~~~d~~-g~~~~~~~--------~~~~~~~~~~~~~g~~~v~~~~~~~ 205 (294)
.. .........+++.+.+++|++....+.+..++.. +....... ....|..+.+.++|+++++....++
T Consensus 213 ~~--~~~~~~~~~ia~d~~~~~lYv~d~~~~~~r~~~~~~~~~~~~g~~~~g~~~~~~~P~~iavd~~G~lyvad~~n~~ 290 (409)
T 3hrp_A 213 LG--STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp CC--TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred CC--CCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCE
T ss_conf 64--1214883199996999989999689938999958997898625667676354789658999489979999889977
Q ss_pred EEEEECCCCEEEEEECCCCCCC----E----EECCCCCEEECCCCCEEEEEC-CCCEEECCC------------------
Q ss_conf 9999878985999844887641----1----411345348938998999804-677143024------------------
Q T0558 206 FVQLNLESNRIVRRVNANDIEG----V----QLFFVAQLFPLQNGGLYICNW-QGHDREAGK------------------ 258 (294)
Q Consensus 206 i~~~d~~~g~~~~~~~~~~~~~----~----~~~~~~~~~~~~~G~i~i~~~-~~~~~~~~~------------------ 258 (294)
|+.++. +|++.+........+ . .+..+.++.+.++|+++++.. ..+.++...
T Consensus 291 I~~~~~-~g~~~~~aG~~~~~g~~dG~g~~A~f~~P~gi~~d~~gniyvaD~~~n~~Irki~~~~g~v~t~aG~~~~~g~ 369 (409)
T 3hrp_A 291 VYKITP-DGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQ 369 (409)
T ss_dssp EEEECT-TCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSC
T ss_pred EEEECC-CCCEEEEECCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 899988-9979999556777885556523126628408999799999999789991999999999859999307998878
Q ss_pred ---------CCCCEEEEECCCCCEEEEE-ECCCCEEEEE
Q ss_conf ---------7775699990899899998-3588537888
Q T0558 259 ---------GKHPQLVEIDSEGKVVWQL-NDKVKFGMIS 287 (294)
Q Consensus 259 ---------~~~~~~~~i~~~G~~vW~~-~~~~~~~~i~ 287 (294)
-..|.-+++|++|.+ |-- ..+.++.+|+
T Consensus 370 ~dG~~~~A~f~~P~gia~d~~g~i-yVaD~~N~~IRKi~ 407 (409)
T 3hrp_A 370 IDGTPLEATFNYPYDICYDGEGGY-WIAEAWGKAIRKYA 407 (409)
T ss_dssp CCBSTTTCCBSSEEEEEECSSSEE-EEEESTTCEEEEEE
T ss_pred CCCCCCCEEECCEEEEEECCCCCE-EEEECCCCEEEEEE
T ss_conf 898756133689038999299999-99989999899992
No 171
>2ghs_A AGR_C_1268P; 15155668, calcium-binding protein, regucalcin, structural genomics, joint center for structural genomics, JCSG; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.72 E-value=2.2e-05 Score=54.76 Aligned_cols=199 Identities=13% Similarity=0.149 Sum_probs=121.8
Q ss_pred EEEEC-CCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC
Q ss_conf 47907-98399841--8828997526770367723777631487873787589997058979999856895889997067
Q T0558 60 VAATK-AGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFET 136 (294)
Q Consensus 60 ~~~~p-dG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~ 136 (294)
+.+.+ +|++++++ .+.++.|+.++++...+..+. .+..+.+.++|++++++ . .++..++..+|+...-.....
T Consensus 54 P~w~~~~g~L~wvDi~~~~I~r~dp~~g~~~~~~~p~--~~~~ia~~~dg~llva~-~-~Gl~~~d~~~g~~~~~~~~~~ 129 (326)
T 2ghs_A 54 PTFDPASGTAWWFNILERELHELHLASGRKTVHALPF--MGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELES 129 (326)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSS--CEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSST
T ss_pred CEEECCCCEEEEEECCCCEEEEEECCCCEEEEEECCC--CCEEEEEECCCCEEEEE-C-CCEEEECCCCCEEEEEEECCC
T ss_conf 7396899999999878999999989999699998999--81799996699899998-8-945997054244788740146
Q ss_pred CCCCCCCCCCEEEECCCCCEEEEEEC----CCEEEEEEC-CCCEEEEEECCCEEEEEEEECCCCE-EEECCCCCEEEEEE
Q ss_conf 76776674008999699899999746----988999937-8858898516973489887348968-99735898799998
Q T0558 137 GIERPHAQFRQINKNKKGNYLVPLFA----TSEVREIAP-NGQLLNSVKLSGTPFSSAFLDNGDC-LVACGDAHCFVQLN 210 (294)
Q Consensus 137 ~~~~~~~~~~~~~~s~dG~~i~~g~~----d~~i~~~d~-~g~~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~i~~~d 210 (294)
.......+.+.+.++|++.++... .+...++.. .++..........+....++++++. +++.+..++|+.++
T Consensus 130 --~~~~~~~nd~~vd~~G~lw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~pNGi~~s~dg~~ly~~dt~~~~I~~~~ 207 (326)
T 2ghs_A 130 --DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVP 207 (326)
T ss_dssp --TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred --CCCCCCCCCCEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEECCCCCEEEEEECCCCEEEEEE
T ss_conf --777786554069899999980355212378525887239928999873036763048587876899504687158999
Q ss_pred CCC--C----EEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCEEEEEE
Q ss_conf 789--8----5999844887641141134534893899899980467714302477756999908998999983
Q T0558 211 LES--N----RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 278 (294)
Q Consensus 211 ~~~--g----~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~vW~~~ 278 (294)
... + +....+......+ ..-++.+.++|++.++.|.+ +.+..++++|+++=.+.
T Consensus 208 ~d~~~~~~~~~~~~~~~~~~~~g----~pdGl~vD~~GnlWVa~~~~----------g~V~~~dpdG~~i~~i~ 267 (326)
T 2ghs_A 208 LDARTGLPTGKAEVFIDSTGIKG----GMDGSVCDAEGHIWNARWGE----------GAVDRYDTDGNHIARYE 267 (326)
T ss_dssp BCTTTCCBSSCCEEEEECTTSSS----EEEEEEECTTSCEEEEEETT----------TEEEEECTTCCEEEEEE
T ss_pred EECCCCCCCCCEEEEEECCCCCC----CCCEEEECCCCCEEEEEECC----------CEEEEECCCCCEEEEEE
T ss_conf 86678944264468875578888----99616788999899989489----------98999989997999998
No 172
>2qe8_A Uncharacterized protein; YP_324691.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.65 E-value=3.6e-05 Score=53.17 Aligned_cols=221 Identities=6% Similarity=-0.008 Sum_probs=123.8
Q ss_pred CCCCEEEEECCCCEEEEE----CCEEEEEECCCCCEEEEE------CCCCCCEEEEEECCCCCEEEEEEC-----CCCEE
Q ss_conf 731164790798399841----882899752677036772------377763148787378758999705-----89799
Q T0558 55 WECNSVAATKAGEILFSY----SKGAKMITRDGRELWNIA------APAGCEMQTARILPDGNALVAWCG-----HPSTI 119 (294)
Q Consensus 55 ~~~~~~~~~pdG~~l~s~----~~~v~~~~~~~~~~~~~~------~~~~~~v~~~~~~~dg~~l~~~s~-----~~~~~ 119 (294)
..+..++++|||+++++. +..+++++..+..+..+. ......+..+++.++|+.+++... ...+.
T Consensus 17 ~~P~gia~~pdG~~~vs~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~p~gva~d~~G~lyv~d~~~~~~~~~~l~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCCCEEEECCCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEE
T ss_conf 98440899799999999846699868999989996896877887765663461589998999999984688667885199
Q ss_pred EEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE----CCCEEEEEECC-CCEEEEEEC-------------
Q ss_conf 998568958899970677677667400899969989999974----69889999378-858898516-------------
Q T0558 120 LEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF----ATSEVREIAPN-GQLLNSVKL------------- 181 (294)
Q Consensus 120 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~----~d~~i~~~d~~-g~~~~~~~~------------- 181 (294)
.++..+|+++..+...............+.+.+++..++... .++....++.. +........
T Consensus 97 ~~~~~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI 176 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE
T ss_pred EEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEE
T ss_conf 99999996999972688764445466887991899848870454434676599976788068883487403146734775
Q ss_pred -----------------CCEEEEEEEECCCCE-EEECCCCCEEEEEECCCCEEEE----EECCCCCCCEEECCCCCEEEC
Q ss_conf -----------------973489887348968-9973589879999878985999----844887641141134534893
Q T0558 182 -----------------SGTPFSSAFLDNGDC-LVACGDAHCFVQLNLESNRIVR----RVNANDIEGVQLFFVAQLFPL 239 (294)
Q Consensus 182 -----------------~~~~~~~~~~~~g~~-~v~~~~~~~i~~~d~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~ 239 (294)
...+..+.+.++|+. +++...++.++.++........ ..............+.++.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~d 256 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISID 256 (343)
T ss_dssp TTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEEC
T ss_pred ECCEEECCCCCCCEECCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 04201123557722112468745787189998999979999799996731433342345433100346754455659988
Q ss_pred CCCCEEEEECCCCEEECCC--------------CCCCEEEEECCCCCEEE
Q ss_conf 8998999804677143024--------------77756999908998999
Q T0558 240 QNGGLYICNWQGHDREAGK--------------GKHPQLVEIDSEGKVVW 275 (294)
Q Consensus 240 ~~G~i~i~~~~~~~~~~~~--------------~~~~~~~~i~~~G~~vW 275 (294)
++|++++.....+.+..+. ...+.-+++++||.+.-
T Consensus 257 ~dG~l~v~~~~~~~I~~~d~~g~~~~~~~~~~~~~~p~~va~~pdG~lyv 306 (343)
T 2qe8_A 257 KDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYF 306 (343)
T ss_dssp TTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEE
T ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCEEE
T ss_conf 99989999769999999989999599998399967823699999982999
No 173
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.58 E-value=5.7e-05 Score=51.72 Aligned_cols=188 Identities=10% Similarity=0.003 Sum_probs=84.5
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEECCE--EEEEECCCCCEEEEECCC---CCC
Q ss_conf 885899974798699998878829999944998731164790798399841882--899752677036772377---763
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKG--AKMITRDGRELWNIAAPA---GCE 96 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~~~--v~~~~~~~~~~~~~~~~~---~~~ 96 (294)
.+.++.+--.+++|.-||.+.+...+ .. ....+..+++.++|+++++..+. +...+.+++......... ...
T Consensus 56 ~~~L~wvDi~~~rI~r~~~~g~~~~~-~~--~~~~~~gl~~~~~g~l~v~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 132 (305)
T 3dr2_A 56 QRTLVWSDLVGRRVLGWREDGTVDVL-LD--ATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNS 132 (305)
T ss_dssp GTEEEEEETTTTEEEEEETTSCEEEE-EE--SCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSC
T ss_pred CCEEEEEECCCCEEEEEECCCCEEEE-EE--CCCCCEEEEECCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCC
T ss_conf 99799998879999999399997999-95--8998558796376408862037851552057861899751247864567
Q ss_pred EEEEEECCCCCEEEEEEC----------------CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE
Q ss_conf 148787378758999705----------------8979999856895889997067767766740089996998999997
Q T0558 97 MQTARILPDGNALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 160 (294)
Q Consensus 97 v~~~~~~~dg~~l~~~s~----------------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g 160 (294)
...+.+.++|.+.++... ..+.+......|+....... ....+.+++++||+.|++.
T Consensus 133 ~nD~~~d~dG~~~~td~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~v~~~-------l~~pNGia~s~dg~~lYv~ 205 (305)
T 3dr2_A 133 PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD-------LDHPNGLAFSPDEQTLYVS 205 (305)
T ss_dssp CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE-------ESSEEEEEECTTSSEEEEE
T ss_pred CCCCEECCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCEEEEEEE-------CCCCCEEEECCCCCEEEEE
T ss_conf 776579689998983023464575446651010256746998278861343200-------0112116772778659998
Q ss_pred ECC-CE-----EEEEECC-CCEEE----EEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECC
Q ss_conf 469-88-----9999378-85889----851697348988734896899735898799998789859998448
Q T0558 161 FAT-SE-----VREIAPN-GQLLN----SVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA 222 (294)
Q Consensus 161 ~~d-~~-----i~~~d~~-g~~~~----~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~ 222 (294)
-.. +. |..++.. +.... .....+.|-.+.+-.+|++++++ .+.|.+++. +|+++.++..
T Consensus 206 Ds~~~~i~~~~i~~~~~~~g~l~~~~~~~~~~~G~PDG~~vD~~G~lwva~--~~~V~v~~p-~G~~l~~I~~ 275 (305)
T 3dr2_A 206 QTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS--GTGVCVFDS-DGQLLGHIPT 275 (305)
T ss_dssp ECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC--SSEEEEECT-TSCEEEEEEC
T ss_pred ECCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCCCCEEEEC--CCEEEEECC-CCCEEEEEEC
T ss_conf 257880457865302334577554215765202267843798999899922--997999999-9969999968
No 174
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, calcium, cytoplasm; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.52 E-value=7.8e-05 Score=50.73 Aligned_cols=202 Identities=10% Similarity=0.145 Sum_probs=123.8
Q ss_pred CEEEEECCCC-EEEEE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC
Q ss_conf 1647907983-99841--88289975267703677237776314878737875899970589799998568958899970
Q T0558 58 NSVAATKAGE-ILFSY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEF 134 (294)
Q Consensus 58 ~~~~~~pdG~-~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~ 134 (294)
-.+.+.+++. +++++ .+.++.|+..++....+..+. .+.++.+.+++++++. +. ..+..++..+++...-...
T Consensus 16 EGP~w~~~~~~l~~vDi~~~~i~r~d~~~~~~~~~~~~~--~~~~~~~~~~g~li~~-~~-~~i~~~~~~~g~~~~l~~~ 91 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA--PVSSVALRQSGGYVAT-IG-TKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSS--CEEEEEEBTTSSEEEE-ET-TEEEEEETTTTEEEEEEEC
T ss_pred CCCEEECCCCEEEEEECCCCEEEEEECCCCCEEEEECCC--CEEEEEEECCCCEEEC-CC-CCEEEEECCCCEEEEEEEC
T ss_conf 688298999999999888999999989999389997899--8137879469988851-48-9469976378557887302
Q ss_pred CCCCCCCCCCCCEEEECCCCCEEEEEEC-----------CCEEEEEECCCCEEEEEECCCEEEEEEEECCCCE-EEECCC
Q ss_conf 6776776674008999699899999746-----------9889999378858898516973489887348968-997358
Q T0558 135 ETGIERPHAQFRQINKNKKGNYLVPLFA-----------TSEVREIAPNGQLLNSVKLSGTPFSSAFLDNGDC-LVACGD 202 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~s~dG~~i~~g~~-----------d~~i~~~d~~g~~~~~~~~~~~~~~~~~~~~g~~-~v~~~~ 202 (294)
.. .......+...+.|+|.+.+.... .+.++.++.+++.......-..++.+.++|+++. +++.+.
T Consensus 92 ~~--~~~~~r~ND~~vd~~G~~~~~~~~~~~~~~~~~~~~g~l~~~~~~g~v~~v~~~~~~pNGia~spD~~~lyv~ds~ 169 (297)
T 3g4e_A 92 DN--DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp CT--TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred CC--CCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEECCC
T ss_conf 58--8767897765781289851124543347664325883599984899579986577522433885887769981378
Q ss_pred CCEEEEEECC--CCEEEEE---ECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECC-CCCEEEE
Q ss_conf 9879999878--9859998---44887641141134534893899899980467714302477756999908-9989999
Q T0558 203 AHCFVQLNLE--SNRIVRR---VNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS-EGKVVWQ 276 (294)
Q Consensus 203 ~~~i~~~d~~--~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~-~G~~vW~ 276 (294)
.+.++.++.. ++.+..+ +...... ..+-+..+.++|++.++.+.+ ++++.+++ +|+++=.
T Consensus 170 ~~~i~~~~~~~~~~~~~~~r~~~~~~~~~----g~PDG~~vD~~GnlwvA~~~~----------g~v~~~~p~~G~~l~~ 235 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEE----QIPDGMCIDAEGKLWVACYNG----------GRVIRLDPVTGKRLQT 235 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGG----CEEEEEEEBTTSCEEEEEETT----------TEEEEECTTTCCEEEE
T ss_pred CCEEEEEEECCCCCCCCCCEEEEEECCCC----CCCCCEEEECCCCEEEEECCC----------CEEEEEECCCCCEEEE
T ss_conf 85699998325357746870676407887----567745993899999998179----------9899997998848999
Q ss_pred EEC
Q ss_conf 835
Q T0558 277 LND 279 (294)
Q Consensus 277 ~~~ 279 (294)
++-
T Consensus 236 I~~ 238 (297)
T 3g4e_A 236 VKL 238 (297)
T ss_dssp EEC
T ss_pred EEC
T ss_conf 979
No 175
>2be1_A Serine/threonine-protein kinase/endoribonuclease IRE1; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=98.49 E-value=7.2e-07 Score=65.58 Aligned_cols=17 Identities=18% Similarity=0.165 Sum_probs=7.9
Q ss_pred CCEEEEECC-CCCEEEEE
Q ss_conf 756999908-99899998
Q T0558 261 HPQLVEIDS-EGKVVWQL 277 (294)
Q Consensus 261 ~~~~~~i~~-~G~~vW~~ 277 (294)
++.++++|. .|+.+|..
T Consensus 221 dgsv~AlD~~tG~~~W~~ 238 (339)
T 2be1_A 221 DKSLLASDLDFRIARWVS 238 (339)
T ss_dssp TTEEEEECSTTCCEEEEC
T ss_pred CCEEEEEECCCCCEEEEE
T ss_conf 984999967889557784
No 176
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A
Probab=98.46 E-value=0.00011 Score=49.65 Aligned_cols=92 Identities=10% Similarity=0.097 Sum_probs=55.3
Q ss_pred EEEEEECCCCEEEEEE--ECCCCCCCCEEEEECCCCEEEEEC---CEEEEEECCCCCEEEEEC--CCCCCEEEEEECCCC
Q ss_conf 6999988788299999--449987311647907983998418---828997526770367723--777631487873787
Q T0558 34 KIAIINKDTKEIVWEY--PLEKGWECNSVAATKAGEILFSYS---KGAKMITRDGRELWNIAA--PAGCEMQTARILPDG 106 (294)
Q Consensus 34 ~i~~~d~~tg~~~w~~--~~~~~~~~~~~~~~pdG~~l~s~~---~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~dg 106 (294)
...+||+.|++..+.. ...+..-|...++.|||++++.+. ..+.+||.... .|.... ...-+-+++...+||
T Consensus 220 ~~~~~dp~t~~~~~~~~~~~~~~~fCsg~a~l~dG~llv~GG~~~~~v~iYDp~t~-~W~~~~~m~~~R~y~ta~~L~DG 298 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD-SWIPGPDMQVARGYQSSATMSDG 298 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT-EEEECCCCSSCCSSCEEEECTTS
T ss_pred EEEEEECCCCCEEECCCCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEECCCC-CEEECCCCCCCCCCEEEEEECCC
T ss_conf 89989547891522334888777663016898899999979969973999948999-18888789986542279997798
Q ss_pred CEEEEEECCC------CEEEEECCCC
Q ss_conf 5899970589------7999985689
Q T0558 107 NALVAWCGHP------STILEVNMKG 126 (294)
Q Consensus 107 ~~l~~~s~~~------~~~~~~~~~G 126 (294)
+.+++++.+. ...+++..++
T Consensus 299 ~v~ViGG~~~g~~~~~~~e~yDp~t~ 324 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred CEEEEECCCCCCCCCCCEEEECCCCC
T ss_conf 19998244699855574678858889
No 177
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.43 E-value=0.00013 Score=49.08 Aligned_cols=202 Identities=12% Similarity=0.077 Sum_probs=122.2
Q ss_pred EEEEEC-CCCEEEEE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECC
Q ss_conf 647907-98399841--882899752677036772377763148787378758999705897999985689588999706
Q T0558 59 SVAATK-AGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFE 135 (294)
Q Consensus 59 ~~~~~p-dG~~l~s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~ 135 (294)
.+.+.+ +|.+++++ .+.++.|+.+++... ..........+.+.++|+.+++. .....+.....+|+........
T Consensus 49 GP~w~~~~~~L~wvDi~~~rI~r~~~~g~~~~--~~~~~~~~~gl~~~~~g~l~v~~-~~~~~~~~~~~~g~~~~~~~~~ 125 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWREDGTVDV--LLDATAFTNGNAVDAQQRLVHCE-HGRRAITRSDADGQAHLLVGRY 125 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEETTSCEEE--EEESCSCEEEEEECTTSCEEEEE-TTTTEEEEECTTSCEEEEECEE
T ss_pred CCEEECCCCEEEEEECCCCEEEEEECCCCEEE--EEECCCCCEEEEECCCCEEEEEC-CCCCEEEEECCCCEEEEEEECC
T ss_conf 17098999979999887999999939999799--99589985587963764088620-3785155205786189975124
Q ss_pred CCCCCCCCCCCEEEECCCCCEEEEEE-----------------CCCEEEEEECCCCEEEEEECCCEEEEEEEECCCCEE-
Q ss_conf 77677667400899969989999974-----------------698899993788588985169734898873489689-
Q T0558 136 TGIERPHAQFRQINKNKKGNYLVPLF-----------------ATSEVREIAPNGQLLNSVKLSGTPFSSAFLDNGDCL- 197 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~s~dG~~i~~g~-----------------~d~~i~~~d~~g~~~~~~~~~~~~~~~~~~~~g~~~- 197 (294)
.+ ......+...+.+||.+.++.. ..+.++.++..++.......-..+..+.++++++.+
T Consensus 126 ~g--~~~~~~nD~~~d~dG~~~~td~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~v~~~l~~pNGia~s~dg~~lY 203 (305)
T 3dr2_A 126 AG--KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLY 203 (305)
T ss_dssp TT--EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEE
T ss_pred CC--CCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCEEEEEEECCCCCEEEECCCCCEEE
T ss_conf 78--6456777657968999898302346457544665101025674699827886134320001121167727786599
Q ss_pred EECCCCCE-----EEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCC
Q ss_conf 97358987-----9999878985999844887641141134534893899899980467714302477756999908998
Q T0558 198 VACGDAHC-----FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK 272 (294)
Q Consensus 198 v~~~~~~~-----i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~ 272 (294)
++.+..++ +..++.++|.+..+....+... ...-++....+|+++++.+ ..+..++++|+
T Consensus 204 v~Ds~~~~i~~~~i~~~~~~~g~l~~~~~~~~~~~---G~PDG~~vD~~G~lwva~~------------~~V~v~~p~G~ 268 (305)
T 3dr2_A 204 VSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD---GLPDGFCVDRGGWLWSSSG------------TGVCVFDSDGQ 268 (305)
T ss_dssp EEECCC---CCCEEEEEEEETTEEEEEEEEECCSS---SCCCSEEECTTSCEEECCS------------SEEEEECTTSC
T ss_pred EEECCCCEEEEEEEEECCCCCCCCCCCEEEEEEEC---CCCCCEEECCCCCEEEECC------------CEEEEECCCCC
T ss_conf 98257880457865302334577554215765202---2678437989998999229------------97999999996
Q ss_pred EEEEEECC
Q ss_conf 99998358
Q T0558 273 VVWQLNDK 280 (294)
Q Consensus 273 ~vW~~~~~ 280 (294)
++=.+.-.
T Consensus 269 ~l~~I~~p 276 (305)
T 3dr2_A 269 LLGHIPTP 276 (305)
T ss_dssp EEEEEECS
T ss_pred EEEEEECC
T ss_conf 99999689
No 178
>1xfd_A Dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.41 E-value=8.9e-06 Score=57.59 Aligned_cols=133 Identities=9% Similarity=-0.018 Sum_probs=77.3
Q ss_pred CCCCEEEEEECCCCEEEEEEECC--CCCCCCEEEEECCCCEEEE-E----------CCEEEEEECCCCCEEEEECC--CC
Q ss_conf 47986999988788299999449--9873116479079839984-1----------88289975267703677237--77
Q T0558 30 SGWNKIAIINKDTKEIVWEYPLE--KGWECNSVAATKAGEILFS-Y----------SKGAKMITRDGRELWNIAAP--AG 94 (294)
Q Consensus 30 s~~~~i~~~d~~tg~~~w~~~~~--~~~~~~~~~~~pdG~~l~s-~----------~~~v~~~~~~~~~~~~~~~~--~~ 94 (294)
..++.|.++|..|++..--.... ....+.+..++|||++++. . ...+++++...++..+.... ..
T Consensus 34 ~~~g~~~~~~~~t~~~~~l~~~~~~~~~~~~~~~~SpDg~~vl~~~~~~~~~r~s~~~~~~i~dl~t~~~~~l~~~~~~~ 113 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN 113 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS
T ss_pred ECCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCEEECCCCCCCC
T ss_conf 37997899988999789987155333455413699899895899987750037345202999998999888666777887
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCC---C---------CCCCCCEEEECCCCCEEEEEEC
Q ss_conf 631487873787589997058979999856895889997067767---7---------6674008999699899999746
Q T0558 95 CEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIE---R---------PHAQFRQINKNKKGNYLVPLFA 162 (294)
Q Consensus 95 ~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~---~---------~~~~~~~~~~s~dG~~i~~g~~ 162 (294)
..+..+.|+|||+.++.... ..+++.....++..+...-..... + -......+.++|||+.|+....
T Consensus 114 ~~~~~~~wSPDG~~lAfv~~-~nl~v~~~~~~~~~~lt~~g~~~~i~~G~~dwvyeeE~~~~~~~~~WSPDgk~iaf~~~ 192 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred CCCCCCEECCCCCEEEEEEC-CEEEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEE
T ss_conf 65341189999998999989-94899988999568994268776044464452011212565453588999881130343
Q ss_pred C
Q ss_conf 9
Q T0558 163 T 163 (294)
Q Consensus 163 d 163 (294)
|
T Consensus 193 D 193 (723)
T 1xfd_A 193 N 193 (723)
T ss_dssp E
T ss_pred C
T ss_conf 4
No 179
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 2fpb_A* 2v91_A*
Probab=98.41 E-value=0.00014 Score=48.81 Aligned_cols=220 Identities=8% Similarity=-0.061 Sum_probs=125.1
Q ss_pred CCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCC------------------CCCCEEEEECCCCEEEEEC--CEEE
Q ss_conf 1478885899974798699998878829999944998------------------7311647907983998418--8289
Q T0558 18 QGSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG------------------WECNSVAATKAGEILFSYS--KGAK 77 (294)
Q Consensus 18 ~~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~------------------~~~~~~~~~pdG~~l~s~~--~~v~ 77 (294)
+..+..+++++++.+++|+-|+..+++...-...... ..+..+++.+++..|+..+ ..+.
T Consensus 25 a~d~~G~l~~~~~~~grI~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~P~gl~~d~~~~~l~v~~~~~~i~ 104 (322)
T 2fp8_A 25 TFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLS 104 (322)
T ss_dssp ECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEE
T ss_pred EECCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEE
T ss_conf 99799999999967999999969998199988557766654346765531235578754148528999899998789859
Q ss_pred EEECCCCCEEEEECC----CCCCEEEEEECCCCCEEEEEEC------------------CCCEEEEECCCCCEEEEEECC
Q ss_conf 975267703677237----7763148787378758999705------------------897999985689588999706
Q T0558 78 MITRDGRELWNIAAP----AGCEMQTARILPDGNALVAWCG------------------HPSTILEVNMKGEVLSKTEFE 135 (294)
Q Consensus 78 ~~~~~~~~~~~~~~~----~~~~v~~~~~~~dg~~l~~~s~------------------~~~~~~~~~~~G~~~~~~~~~ 135 (294)
.++..++........ .-..+..+.+.+++..++.... .+.++.++..+|+..-...
T Consensus 105 ~i~~~~g~~~~~~~~~~~~~~~~~nd~~~~~~~g~~y~td~~~~~~~~~~~~~~~~~~~~G~v~~~d~~~g~~~~~~~-- 182 (322)
T 2fp8_A 105 VVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-- 182 (322)
T ss_dssp EECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE--
T ss_pred EEECCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEECCCCCCEEEEEECCCCEEEEEEE--
T ss_conf 995899928997750378776775236897899969994132244654444410102799879999999996999982--
Q ss_pred CCCCCCCCCCCEEEECCCCCEEEE-EECCCEEEEEECCC----CEEEEEECCCEEEEEEEECCCCEEEECCCC-------
Q ss_conf 776776674008999699899999-74698899993788----588985169734898873489689973589-------
Q T0558 136 TGIERPHAQFRQINKNKKGNYLVP-LFATSEVREIAPNG----QLLNSVKLSGTPFSSAFLDNGDCLVACGDA------- 203 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~s~dG~~i~~-g~~d~~i~~~d~~g----~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~------- 203 (294)
.....+.++++|||+.|++ -+..++|..|+.++ ... .+.....|-.+.+.++|+++++...+
T Consensus 183 -----~l~~pnGia~s~dg~~lyvadt~~~rI~r~~~~~~~~g~~~-~~~~~~~pdgi~~d~dG~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 183 -----ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAE-VLVKIPNPGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp -----EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEE-EEEECSSEEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred -----CCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCE-EEECCCCCCCCEECCCCCEEEEECCCCCCCCCC
T ss_conf -----65201068997898999992289988999989799888736-977589998705889999999873566763014
Q ss_pred ---CEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEEC
Q ss_conf ---8799998789859998448876411411345348938998999804
Q T0558 204 ---HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 249 (294)
Q Consensus 204 ---~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~ 249 (294)
..+..++. +|+++..+..... ...... +.....+|.+++.+.
T Consensus 257 ~~~~~vv~~~~-~G~~~~~~~~~~g--~~~~~~-s~v~~~~g~Lyigs~ 301 (322)
T 2fp8_A 257 RVDPKGIKFDE-FGNILEVIPLPPP--FAGEHF-EQIQEHDGLLYIGTL 301 (322)
T ss_dssp CEEEEEEEECT-TSCEEEEEECCTT--TTTSCC-CEEEEETTEEEEECS
T ss_pred CCCCCEEEECC-CCCEEEEEECCCC--CCCCCE-EEEEEECCEEEEEEC
T ss_conf 78974899999-9989899988999--650456-899984999999715
No 180
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine protease, proline-specific peptidase; HET: AIO; 1.95A {Porphyromonas gingivalis W83} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.25 E-value=0.00032 Score=46.24 Aligned_cols=189 Identities=9% Similarity=0.030 Sum_probs=100.9
Q ss_pred CEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEE-EECCEEEEEECC-----CCCEEEEE-CCCCC-
Q ss_conf 58999747986999988788299999449987311647907983998-418828997526-----77036772-37776-
Q T0558 24 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRD-----GRELWNIA-APAGC- 95 (294)
Q Consensus 24 ~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~-s~~~~v~~~~~~-----~~~~~~~~-~~~~~- 95 (294)
+....-...+.+.++|.+++++..-...+ .....+.|+|||+.|+ ..++++++.+.. .....+.. .+...
T Consensus 92 ~~~~~~~~~~~~~~yd~~~~~~~~~~~~~--~~~~~~~wSPDG~~iAfv~~~nlyv~~~~~~~~~~~~~~~lT~dG~~~~ 169 (706)
T 2z3z_A 92 RGLVVLFTQGGLVGFDMLARKVTYLFDTN--EETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETL 169 (706)
T ss_dssp TTEEEEEETTEEEEEETTTTEEEEEECCT--TCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTE
T ss_pred CEEEEEECCCEEEEEECCCCCEEECCCCC--CCCCCEEECCCCCEEEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCE
T ss_conf 27999965986999999999099803799--8746518999999899999993899865755677770699767895445
Q ss_pred ------------CEEEEEECCCCCEEEEEECCCC---------------------------------EEEEECCCCCEEE
Q ss_conf ------------3148787378758999705897---------------------------------9999856895889
Q T0558 96 ------------EMQTARILPDGNALVAWCGHPS---------------------------------TILEVNMKGEVLS 130 (294)
Q Consensus 96 ------------~v~~~~~~~dg~~l~~~s~~~~---------------------------------~~~~~~~~G~~~~ 130 (294)
...++.|+|||++++....|.+ +.+.+..+|+..+
T Consensus 170 ~~~d~v~eee~~~~~~~~WSPDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~ypk~G~~n~~v~l~v~d~~~g~~~~ 249 (706)
T 2z3z_A 170 VYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY 249 (706)
T ss_dssp EESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE
T ss_pred ECCCCEEHHHCCCCCCEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCEEE
T ss_conf 61511010230556634888999879999953778824788501688886358846789796988489999999997899
Q ss_pred EEECCCCCCCCCCCCCEEEECCCCCEEEEEECC-----CEEEEEECCC-CEEEEE--ECC----CEEEEEEEECCCC-EE
Q ss_conf 997067767766740089996998999997469-----8899993788-588985--169----7348988734896-89
Q T0558 131 KTEFETGIERPHAQFRQINKNKKGNYLVPLFAT-----SEVREIAPNG-QLLNSV--KLS----GTPFSSAFLDNGD-CL 197 (294)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d-----~~i~~~d~~g-~~~~~~--~~~----~~~~~~~~~~~g~-~~ 197 (294)
.. . .......+..+.++|||+.++....+ ..+..++... ...... ... .......+.++++ .+
T Consensus 250 l~-~---~~~~~~yi~~v~WspDg~~i~~~~~nR~q~~~~l~~~d~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 325 (706)
T 2z3z_A 250 LQ-T---GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQF 325 (706)
T ss_dssp CC-C---CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEE
T ss_pred EE-C---CCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEE
T ss_conf 53-5---8987726878898249980489973258872699999668883578998614775101344036860898089
Q ss_pred EECC-CC--CEEEEEECCCCEEEE
Q ss_conf 9735-89--879999878985999
Q T0558 198 VACG-DA--HCFVQLNLESNRIVR 218 (294)
Q Consensus 198 v~~~-~~--~~i~~~d~~~g~~~~ 218 (294)
+..+ .+ ..++.++..+++...
T Consensus 326 ~~~s~~~g~~~l~~~~~~~~~~~~ 349 (706)
T 2z3z_A 326 IWQSRRDGWNHLYLYDTTGRLIRQ 349 (706)
T ss_dssp EEEECTTSSCEEEEEETTSCEEEE
T ss_pred EEEECCCCCCEEEEEECCCCEEEE
T ss_conf 999468995079999179973688
No 181
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.21 E-value=0.00039 Score=45.64 Aligned_cols=161 Identities=6% Similarity=-0.091 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHHHHHC-------------------------CCCCCCCEEEEEC-CC-----CEEEEEECCCCEEEEEE
Q ss_conf 90345568887663200-------------------------1478885899974-79-----86999988788299999
Q T0558 1 MKNFILLVALFLVAPFA-------------------------QGSSPQHLLVGGS-GW-----NKIAIINKDTKEIVWEY 49 (294)
Q Consensus 1 ~~~~~~~~~~~~~~~~~-------------------------~~s~~~~~l~~gs-~~-----~~i~~~d~~tg~~~w~~ 49 (294)
||++.++.++++....+ +.|++++.++--. .+ ..+.++|..+++...-.
T Consensus 1 m~~~~~~~~~~~~~~~~a~~~~~t~~~~~~~~~~~~~~~~~~~~SPDG~~i~~~~~~~~~~~~~~lw~~d~~~~~~~~l~ 80 (741)
T 2ecf_A 1 MRHLFASLAFMLATSTVAHAEKLTLEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLV 80 (741)
T ss_dssp ---------------------CCCHHHHTSSSCTTCCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEE
T ss_conf 95899999999875665336778999961777656646688689989998999980589986026999988999579966
Q ss_pred E-----------------------CCCCCCCCEEEEECCCCEEE-EECCEEEEEECCCCC--EEEEECCCCCCEEEEEEC
Q ss_conf 4-----------------------49987311647907983998-418828997526770--367723777631487873
Q T0558 50 P-----------------------LEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRE--LWNIAAPAGCEMQTARIL 103 (294)
Q Consensus 50 ~-----------------------~~~~~~~~~~~~~pdG~~l~-s~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~ 103 (294)
. ......+.+..++|||+.++ +.++.+++++..... ...........+....|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~ws~Dg~~l~f~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~S 160 (741)
T 2ecf_A 81 DSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLS 160 (741)
T ss_dssp CGGGTC--------------------CCEESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEEC
T ss_pred CCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCEEEEEEECCCCCCCCEECCCCCCCCCCEEEC
T ss_conf 60103575221685564222443321578702079989999899998998999995489866526526898763532899
Q ss_pred CCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCC--C--------CCCCCCEEEECCCCCEEEEEEC
Q ss_conf 787589997058979999856895889997067767--7--------6674008999699899999746
Q T0558 104 PDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIE--R--------PHAQFRQINKNKKGNYLVPLFA 162 (294)
Q Consensus 104 ~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~--~--------~~~~~~~~~~s~dG~~i~~g~~ 162 (294)
|||++++.... ..+.+.+..+|+............ + .......+.++|||+.|+....
T Consensus 161 PDG~~iaf~~~-~~l~~~~~~~~~~~~~~~~~~~~i~~g~~~~v~~~e~~~~~~~~wspDg~~l~~~~~ 228 (741)
T 2ecf_A 161 PKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp TTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred CCCCEEEEEEC-CCEEEEECCCCCEEEEEECCCCEEECCCCCCHHHHHCCCCCCEEECCCCCEEEEEEE
T ss_conf 99998999976-835887668883478860787016604534002433145663488999884505764
No 182
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.19 E-value=0.00043 Score=45.29 Aligned_cols=176 Identities=9% Similarity=-0.039 Sum_probs=70.1
Q ss_pred CEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE---CCEEEEEECCCCCE----EEEECCCCCCEEEEEECCC
Q ss_conf 8699998878829999944998731164790798399841---88289975267703----6772377763148787378
Q T0558 33 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY---SKGAKMITRDGREL----WNIAAPAGCEMQTARILPD 105 (294)
Q Consensus 33 ~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~~~~~~----~~~~~~~~~~v~~~~~~~d 105 (294)
+.|+.++++..+.. +. ......+..+.+.++++.++.. ++.++..+.++... ..........+.++++.+.
T Consensus 10 ~~I~~~~ld~~~~~-~l-~~~~~~~~~i~~d~~~~~vYwsd~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~P~giavD~~ 87 (316)
T 1ijq_A 10 HEVRKMTLDRSEYT-SL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp SSEEEEETTSCCCE-EE-ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CEEEEEECCCCCEE-EE-ECCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEECC
T ss_conf 80999989999679-98-75998516999981899999999999989999897887553367885258889767999679
Q ss_pred CCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE--ECCCEEEEEECCCCEEEEEEC--
Q ss_conf 7589997058979999856895889997067767766740089996998999997--469889999378858898516--
Q T0558 106 GNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL--FATSEVREIAPNGQLLNSVKL-- 181 (294)
Q Consensus 106 g~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g--~~d~~i~~~d~~g~~~~~~~~-- 181 (294)
++.++.+......+.....+|......... .......+++.|.+++++.. ...+.|...+.++........
T Consensus 88 ~~~lY~~d~~~~~I~~~~~~g~~~~~~~~~-----~~~~p~~i~vd~~~g~l~~~~~~~~~~i~~~~~dg~~~~~~~~~~ 162 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE-----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 162 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEEC-----TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS
T ss_pred CCEEEEEECCCCEEEEEECCCCEEEEEECC-----CCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEEECC
T ss_conf 997999967897179994699818999749-----977876069953535178983589656999715787069998568
Q ss_pred CCEEEEEEEECC-CCEEEECCCCCEEEEEECCCCE
Q ss_conf 973489887348-9689973589879999878985
Q T0558 182 SGTPFSSAFLDN-GDCLVACGDAHCFVQLNLESNR 215 (294)
Q Consensus 182 ~~~~~~~~~~~~-g~~~v~~~~~~~i~~~d~~~g~ 215 (294)
...|.+.++.++ +..+++....+.|..++..++.
T Consensus 163 ~~~p~glaiD~~~~~lY~~d~~~~~I~~~~~dG~~ 197 (316)
T 1ijq_A 163 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 197 (316)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCC
T ss_conf 76751568860476899996899989999799996
No 183
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=98.18 E-value=0.00045 Score=45.18 Aligned_cols=198 Identities=15% Similarity=0.207 Sum_probs=117.1
Q ss_pred EEEEEECCCCCEEEEECC-----------CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCC-CCC
Q ss_conf 289975267703677237-----------77631487873787589997058979999856895889997067767-766
Q T0558 75 GAKMITRDGRELWNIAAP-----------AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIE-RPH 142 (294)
Q Consensus 75 ~v~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~ 142 (294)
..+++|.+|...|-.... ...........+++.+.... ...+...+..|+++|++.+..+.. .|+
T Consensus 176 ~~~~~D~~G~vRW~~~~~~~~d~~~~~~~~~g~~~~~~~~~~g~~~~~~---~~~~~e~D~~G~v~~~y~lp~~~~~~HH 252 (571)
T 3elq_A 176 FTFIVDTEGEYRWWLDQDTFYDGRDRDINKRGYLMGIRETPRGTFTAVQ---GQHWYEFDMMGQVLEDHKLPRGFADATH 252 (571)
T ss_dssp EEEEECTTSCEEEECCGGGTCCSSSCCGGGCSCCEEEEECTTSCEEEEE---BTEEEEECTTCCEEEEEECCTTEECBCS
T ss_pred CEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEC---CCEEEEECCCCCEEEEEECCCCCCCCCC
T ss_conf 2289979986899835773333200014688528777756887556502---7647773588977999988987665565
Q ss_pred CCCCEEEECCCCCEEEEEEC--------------CCEEEEEECCCCEEEEEECC--------------------------
Q ss_conf 74008999699899999746--------------98899993788588985169--------------------------
Q T0558 143 AQFRQINKNKKGNYLVPLFA--------------TSEVREIAPNGQLLNSVKLS-------------------------- 182 (294)
Q Consensus 143 ~~~~~~~~s~dG~~i~~g~~--------------d~~i~~~d~~g~~~~~~~~~-------------------------- 182 (294)
+ +...|+|++|+.... .-.|..+|.+|+.+|.+...
T Consensus 253 D----~~~lpNGN~Lilv~~~~~~~~~g~~~~~v~D~IiEiD~tGevV~eWd~~dhl~~~~~~~~~~~d~~~~~~n~~~~ 328 (571)
T 3elq_A 253 E----SIETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVDKSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNVDLA 328 (571)
T ss_dssp C----EEECTTSCEEEEEEETTEECTTSCEECCCSCEEEEECTTSCEEEEEEHHHHSCTTCCTTGGGSBTTC-------C
T ss_pred C----CEECCCCCEEEEEECCCCCCCCCCCCCEECCEEEEECCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 5----168799989999972445444577786657799999999978999872783483013442223333334564434
Q ss_pred ------------------------C--EEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCC---------
Q ss_conf ------------------------7--34898873489689973589879999878985999844887641---------
Q T0558 183 ------------------------G--TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEG--------- 227 (294)
Q Consensus 183 ------------------------~--~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~--------- 227 (294)
+ -..++...++++.++.++....+..++ .++++.|.+..+....
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~DW~H~NsI~yd~~~d~ii~S~r~~~vi~I~-~~~~i~W~lg~~~gw~~~~~~~~l~ 407 (571)
T 3elq_A 329 HAGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQGVVKIG-RDKQVKWILAPSKGWEKPLASKLLK 407 (571)
T ss_dssp CCSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEEEETTTEEEEEE-TTSCEEEEESCSTTCCTTGGGGBCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCEEEEEC-CCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 644200025555567666778755441866514689999899961752599996-8995899946887876211233354
Q ss_pred ------E--------------EECCCC--CEEECCCCCEEEEECC-CC--EEE-CCCC--CCCEEEEECCCCC---EEEE
Q ss_conf ------1--------------411345--3489389989998046-77--143-0247--7756999908998---9999
Q T0558 228 ------V--------------QLFFVA--QLFPLQNGGLYICNWQ-GH--DRE-AGKG--KHPQLVEIDSEGK---VVWQ 276 (294)
Q Consensus 228 ------~--------------~~~~~~--~~~~~~~G~i~i~~~~-~~--~~~-~~~~--~~~~~~~i~~~G~---~vW~ 276 (294)
. ...+-. .....++|++++.+-. .. +.. .... +..-.+.+|.+-. .+|+
T Consensus 408 p~~~~G~~~~~~~~~~~~~~df~~~~~QH~~~~~~~g~i~~FDNg~~r~~~~~~~~~~~~Sr~v~y~ID~~~~T~~~vw~ 487 (571)
T 3elq_A 408 PVDANGKPITCNENGLCENSDFDFTYTQHTAWISSKGTLTIFDNGDGRHLEQPALPTMKYSRFVEYKIDEKKGTVQQVWE 487 (571)
T ss_dssp EBCTTSCBCCBCTTSCBSSSSCCCCSSCEEEEECTTSCEEEEECCTTGGGSCCSSGGGCCCEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEE
T ss_conf 22346751224655533456665215650538879980999868997777766678888653899997589983898789
Q ss_pred EECC
Q ss_conf 8358
Q T0558 277 LNDK 280 (294)
Q Consensus 277 ~~~~ 280 (294)
+...
T Consensus 488 Y~~~ 491 (571)
T 3elq_A 488 YGKE 491 (571)
T ss_dssp ECGG
T ss_pred ECCC
T ss_conf 4478
No 184
>1qni_A Nitrous-oxide reductase; oxidoreductase, denitrification, MAD, electron transfer; 2.40A {Pseudomonas nautica} SCOP: b.6.1.4 b.69.3.1
Probab=98.16 E-value=0.00049 Score=44.87 Aligned_cols=252 Identities=14% Similarity=0.144 Sum_probs=146.0
Q ss_pred HCCCCCCCCEEEEE-CCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCC--EEEEECC----------------E-
Q ss_conf 00147888589997-47986999988788299999449987311647907983--9984188----------------2-
Q T0558 16 FAQGSSPQHLLVGG-SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE--ILFSYSK----------------G- 75 (294)
Q Consensus 16 ~~~~s~~~~~l~~g-s~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~--~l~s~~~----------------~- 75 (294)
+..+..+++++... ..+++|.++|+++.|+..-..+.....++.+++.++++ |++.... .
T Consensus 85 ~TdgtyDGrylFVNDkan~RVAvIDldtfkt~qIieIPn~~g~HG~~f~k~p~T~YV~~~~ef~vP~pndg~~~~~~~~~ 164 (581)
T 1qni_A 85 MTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSY 164 (581)
T ss_dssp EETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEE
T ss_pred CCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 21785463289997688973899987443365789788876887302405798559972564466658877523456651
Q ss_pred --EEEEECCC-CCEEEEECCCCCCEEEEEECCCCCEEEEEECCCC-----------------------------------
Q ss_conf --89975267-7036772377763148787378758999705897-----------------------------------
Q T0558 76 --AKMITRDG-RELWNIAAPAGCEMQTARILPDGNALVAWCGHPS----------------------------------- 117 (294)
Q Consensus 76 --v~~~~~~~-~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~----------------------------------- 117 (294)
....|... +..|+...+.. ...+..+++|++.++.+.+..
T Consensus 165 ~~f~~VD~etm~v~~QV~V~g~--l~~~d~s~dGk~af~TsyNsE~~~~l~~~s~~d~D~vvV~N~~~ie~~vk~Gk~~~ 242 (581)
T 1qni_A 165 TMFTAIDAETMDVAWQVIVDGN--LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKT 242 (581)
T ss_dssp EEEEEEETTTCSEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBC
T ss_pred EEEEEECCCCCCEEEEEECCCC--HHHCEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECHHHHHHHHCCCCEEE
T ss_conf 2589884533737489836998--20032568899699998427763564121114520799965488676531698489
Q ss_pred -----EEEEECCCC-CEEEEEECCCCCCCCCCCCCEEEECCCCCEEEE-EECCCEEEEEECCC-------------CEEE
Q ss_conf -----999985689-588999706776776674008999699899999-74698899993788-------------5889
Q T0558 118 -----TILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVP-LFATSEVREIAPNG-------------QLLN 177 (294)
Q Consensus 118 -----~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~-g~~d~~i~~~d~~g-------------~~~~ 177 (294)
+...+.... ++++..+.+. . .-.+..+|||+|+++ +.-+.++.++|.+. ...-
T Consensus 243 i~g~~V~VID~~~~s~vt~~IPvpK---s----PHGV~VSPDGkYi~vsGKLSpTVSVID~~k~~~~~~~k~~~~~~v~~ 315 (581)
T 1qni_A 243 IGDSKVPVVDGRGESEFTRYIPVPK---N----PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVA 315 (581)
T ss_dssp CTTCCCCEEECSSSCSSEEEECCBS---S----CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEE
T ss_pred ECCCCCEEEECCCCCCEEEEEECCC---C----CCCEEECCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCHHHCEEE
T ss_conf 1798725863676776389961488---9----88758789997899948639922899757858876157885355798
Q ss_pred EEECCCEEEEEEEECCCCEEEECCCCCEEEEEECC----------CCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEE
Q ss_conf 85169734898873489689973589879999878----------98599984488764114113453489389989998
Q T0558 178 SVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLE----------SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYIC 247 (294)
Q Consensus 178 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~ 247 (294)
..+.+-.|....|-..|+-|-+.--+..+..|+.. ...++.++.-+-.++ ++..+-+.-..++|+.++.
T Consensus 316 e~elGLGPLHt~fD~~G~aYTslf~ds~vvkw~~~~a~~~~~g~~~~~v~~k~~v~y~~g-h~~~~~g~t~~~~gk~l~~ 394 (581)
T 1qni_A 316 EPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPG-HNHASLTESRDADGKWLVV 394 (581)
T ss_dssp CCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCCCEEEE
T ss_pred EECCCCCCCCCCCCCCCCEEEEEEEECEEEEEECHHHHHHHCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCCEEEE
T ss_conf 640464444101079872799986301379974247778645666853453665535898-7615777878988879998
Q ss_pred -ECCCCEEECCCC----CCCEEEEECCCC-CEEEEE
Q ss_conf -046771430247----775699990899-899998
Q T0558 248 -NWQGHDREAGKG----KHPQLVEIDSEG-KVVWQL 277 (294)
Q Consensus 248 -~~~~~~~~~~~~----~~~~~~~i~~~G-~~vW~~ 277 (294)
|.-+.++....+ +..||+-|+.+- ++|.+.
T Consensus 395 ~nk~skdrfl~vgpl~pen~qlidIsg~kM~l~~d~ 430 (581)
T 1qni_A 395 LSKFSKDRFLPVGPLHPENDQLIDISGEEMKLVHDG 430 (581)
T ss_dssp EESCCGGGSCCCSSSCCEEEEEEECSSSSCEEEEEE
T ss_pred ECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECC
T ss_conf 045345547578899876551588479824997437
No 185
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A
Probab=98.15 E-value=0.0005 Score=44.82 Aligned_cols=232 Identities=13% Similarity=0.102 Sum_probs=111.0
Q ss_pred HHHCCCCCCCCEEEEECC-CCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEC--------CEEEEEECCCC
Q ss_conf 320014788858999747-986999988788299999449987311647907983998418--------82899752677
Q T0558 14 APFAQGSSPQHLLVGGSG-WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYS--------KGAKMITRDGR 84 (294)
Q Consensus 14 ~~~~~~s~~~~~l~~gs~-~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~--------~~v~~~~~~~~ 84 (294)
|.-.+..+++++++.|.. ..++.+||..+++-...-++......+.+...+||++++.+. ..+.+||....
T Consensus 245 Csg~a~l~dG~llv~GG~~~~~v~iYDp~t~~W~~~~~m~~~R~y~ta~~L~DG~v~ViGG~~~g~~~~~~~e~yDp~t~ 324 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EEEEEECCCCCEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCC
T ss_conf 30168988999999799699739999489991888878998654227999779819998244699855574678858889
Q ss_pred CEEEEECCCCCCEE---------------EEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCC--CE
Q ss_conf 03677237776314---------------87873787589997058979999856895889997067767766740--08
Q T0558 85 ELWNIAAPAGCEMQ---------------TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQF--RQ 147 (294)
Q Consensus 85 ~~~~~~~~~~~~v~---------------~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~ 147 (294)
.|........... -+-..++|+.++.+.........+...+..............+.... .+
T Consensus 325 -~W~~lp~~~~~~~~~~~~~~~~~~~~~~~v~~~~~G~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a 403 (656)
T 1k3i_A 325 -TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNA 403 (656)
T ss_dssp -EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEE
T ss_pred -CEEECCCCCCCCEEECCCCCEEECCCEEEEEECCCCEEEEECCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCE
T ss_conf -5457787665630303554058539838999887992999868777358147666537306566787765763332606
Q ss_pred E-EECCCCCEEEEEECC--------CEEEEEE---CCC-CEEEEEEC----CCEEEEEEEECCCCEEEECCCCC------
Q ss_conf 9-996998999997469--------8899993---788-58898516----97348988734896899735898------
Q T0558 148 I-NKNKKGNYLVPLFAT--------SEVREIA---PNG-QLLNSVKL----SGTPFSSAFLDNGDCLVACGDAH------ 204 (294)
Q Consensus 148 ~-~~s~dG~~i~~g~~d--------~~i~~~d---~~g-~~~~~~~~----~~~~~~~~~~~~g~~~v~~~~~~------ 204 (294)
+ ....+|++++.|... ......+ ... ...|.... .-.-......+||++++.++...
T Consensus 404 v~~~~~~g~i~v~GG~~~~~~~~~~~~~~~~~l~~~~~~~~~w~~~~~mp~~R~~~~avvLpdG~VlViGG~~~g~~~~~ 483 (656)
T 1k3i_A 404 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED 483 (656)
T ss_dssp EEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCC
T ss_pred EEEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCC
T ss_conf 77504588699950346788876666237975135888888267428887765362089950999999978644666789
Q ss_pred -----EEEEEECCCCEEEEEECCCCCCCEEECCCCCEEECCCCCEEEEECC
Q ss_conf -----7999987898599984488764114113453489389989998046
Q T0558 205 -----CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQ 250 (294)
Q Consensus 205 -----~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~i~~~~ 250 (294)
...+||.++++ +...... ..-. .+......++||++++.+..
T Consensus 484 ~~~~~~~elYDP~t~~-W~~la~~--~~pR-~yHs~a~LlpDG~Vlv~GG~ 530 (656)
T 1k3i_A 484 STPVFTPEIYVPEQDT-FYKQNPN--SIVR-VYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CSBCCCCEEEEGGGTE-EEECCCC--SSCC-CTTEEEEECTTSCEEEEECC
T ss_pred CCEEEEEEEEECCCCC-EEECCCC--CCCC-CCCEEEEECCCCEEEEECCC
T ss_conf 9444447999389996-7788899--9876-31137999689989998789
No 186
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.14 E-value=7.4e-05 Score=50.88 Aligned_cols=137 Identities=13% Similarity=0.033 Sum_probs=86.4
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEEC--CCCCCCCEEEEECCCCEEEEE-----------CCEEEEEECCCCCEEE
Q ss_conf 885899974798699998878829999944--998731164790798399841-----------8828997526770367
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL--EKGWECNSVAATKAGEILFSY-----------SKGAKMITRDGRELWN 88 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~--~~~~~~~~~~~~pdG~~l~s~-----------~~~v~~~~~~~~~~~~ 88 (294)
++.-++..+.++.+.++|..+|+..--+.. -....+....++|||++++.. .+.+.+++..++++.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpDg~~il~~~~~~~~~r~s~~~~~~v~d~~~~~~~~ 104 (719)
T 1z68_A 25 SGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR 104 (719)
T ss_dssp SSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC
T ss_pred CCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCEEE
T ss_conf 89859999189969999899997888476430122466624898999979999778311365034429999899996886
Q ss_pred EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCC-----CC---------CCCCEEEECCCC
Q ss_conf 7237776314878737875899970589799998568958899970677677-----66---------740089996998
Q T0558 89 IAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIER-----PH---------AQFRQINKNKKG 154 (294)
Q Consensus 89 ~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~-----~~---------~~~~~~~~s~dG 154 (294)
... ....+..+.|+|||++++... +..+++.+..+++... ... .+... .+ .....+.++|||
T Consensus 105 l~~-~~~~~~~~~wSPDGk~IAfv~-~~nLyv~~~~~~~~~~-lT~-dg~~~~~~~g~~d~vy~ee~~~~~~~~~WSpDg 180 (719)
T 1z68_A 105 GNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ-ITF-NGRENKIFNGIPDWVYEEEMLATKYALWWSPNG 180 (719)
T ss_dssp SSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCC-CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS
T ss_pred CCC-CCCCCCEEEECCCCCEEEEEE-CCEEEEEECCCCCEEE-ECC-CCCCCCEECCCCCCEEHHHHCCCCCCEEECCCC
T ss_conf 677-887641038999999899998-9869999899997489-726-897573554663311000012566625989999
Q ss_pred CEEEEEEC
Q ss_conf 99999746
Q T0558 155 NYLVPLFA 162 (294)
Q Consensus 155 ~~i~~g~~ 162 (294)
+.|+....
T Consensus 181 ~~ia~~~~ 188 (719)
T 1z68_A 181 KFLAYAEF 188 (719)
T ss_dssp SEEEEEEE
T ss_pred CCCCEEEE
T ss_conf 73330375
No 187
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.13 E-value=2.3e-05 Score=54.58 Aligned_cols=161 Identities=9% Similarity=0.113 Sum_probs=103.4
Q ss_pred CCCCEEEEECCCCEEEEE---CCEEEEEECCCCCEEEEECC------CC----CCEEEEEECCCCCEEEEEECCCC----
Q ss_conf 731164790798399841---88289975267703677237------77----63148787378758999705897----
Q T0558 55 WECNSVAATKAGEILFSY---SKGAKMITRDGRELWNIAAP------AG----CEMQTARILPDGNALVAWCGHPS---- 117 (294)
Q Consensus 55 ~~~~~~~~~pdG~~l~s~---~~~v~~~~~~~~~~~~~~~~------~~----~~v~~~~~~~dg~~l~~~s~~~~---- 117 (294)
.-+..+++++.+..++.+ .+.|..++..++........ .. ..+..+++.++|+..++......
T Consensus 13 lYPegia~D~~~~~~yVsd~~~~rI~vf~~~g~~~~~~~i~~~~~~G~g~~q~~~p~GVavD~~GnL~Vv~~~~~~v~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CCCCCEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEE
T ss_conf 28874788089999999517899799992899837889822554467787762352489998999499996799428986
Q ss_pred ---------EEEEE---CCCCCEEEEEECCCCC-------CCCCCCCCEEEECCCCCEEEEEE-CCCEEEEEECCCCEEE
Q ss_conf ---------99998---5689588999706776-------77667400899969989999974-6988999937885889
Q T0558 118 ---------TILEV---NMKGEVLSKTEFETGI-------ERPHAQFRQINKNKKGNYLVPLF-ATSEVREIAPNGQLLN 177 (294)
Q Consensus 118 ---------~~~~~---~~~G~~~~~~~~~~~~-------~~~~~~~~~~~~s~dG~~i~~g~-~d~~i~~~d~~g~~~~ 177 (294)
+..++ ..+++.+|........ .........+++.++|+..++.+ ....|+.++++|+.+.
T Consensus 93 ~~~~~~~~~l~~~~l~~~~~~~~~~~vdl~~~~~~~~~~~g~~~~~p~~iavD~~GniyV~d~~~~~~I~~~~~dG~~~~ 172 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVS 172 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEE
T ss_pred CCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEECCCCCEEE
T ss_conf 45577773533562266037836899745654313504788622576408998999999953589858999959999999
Q ss_pred EEECC-------CEEEEEEEECCCCEEEECCCCCEEEEEECCCCE
Q ss_conf 85169-------734898873489689973589879999878985
Q T0558 178 SVKLS-------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 215 (294)
Q Consensus 178 ~~~~~-------~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~ 215 (294)
.+... ..|..+++.++|.++|+...++++..+|.++..
T Consensus 173 ~~g~~g~~~g~~~~p~Gia~d~~g~i~Vad~~~~~l~~fd~~~~~ 217 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY 217 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS
T ss_pred EEECCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCC
T ss_conf 984278888764342217983899789985899859999588887
No 188
>1xfd_A Dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.00 E-value=0.00076 Score=43.49 Aligned_cols=101 Identities=10% Similarity=-0.013 Sum_probs=66.9
Q ss_pred HCCCCCCCCEEEEECC---------CCEEEEEECCCCEEEEEEECC-CCCCCCEEEEECCCCEEE-EECCEEEEEECCCC
Q ss_conf 0014788858999747---------986999988788299999449-987311647907983998-41882899752677
Q T0558 16 FAQGSSPQHLLVGGSG---------WNKIAIINKDTKEIVWEYPLE-KGWECNSVAATKAGEILF-SYSKGAKMITRDGR 84 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~---------~~~i~~~d~~tg~~~w~~~~~-~~~~~~~~~~~pdG~~l~-s~~~~v~~~~~~~~ 84 (294)
-.+.|++++.++.... .+.+.++|.++++..--.+.. ....+..+.++|||+.|+ ..+.++++.+..++
T Consensus 65 ~~~~SpDg~~vl~~~~~~~~~r~s~~~~~~i~dl~t~~~~~l~~~~~~~~~~~~~~wSPDG~~lAfv~~~nl~v~~~~~~ 144 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGK 144 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSS
T ss_pred EEEECCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCEECCCCCEEEEEECCEEEEEECCCC
T ss_conf 36998998958999877500373452029999989998886667778876534118999999899998994899988999
Q ss_pred CEEEEEC-CCCCCE-----------------EEEEECCCCCEEEEEECCC
Q ss_conf 0367723-777631-----------------4878737875899970589
Q T0558 85 ELWNIAA-PAGCEM-----------------QTARILPDGNALVAWCGHP 116 (294)
Q Consensus 85 ~~~~~~~-~~~~~v-----------------~~~~~~~dg~~l~~~s~~~ 116 (294)
+..+... +....+ .+..|+|||++++....|.
T Consensus 145 ~~~~lt~~g~~~~i~~G~~dwvyeeE~~~~~~~~~WSPDgk~iaf~~~D~ 194 (723)
T 1xfd_A 145 QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred CEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECC
T ss_conf 56899426877604446445201121256545358899988113034347
No 189
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.00 E-value=0.00098 Score=42.69 Aligned_cols=192 Identities=12% Similarity=0.004 Sum_probs=122.1
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEE---ECCCCCCCCEEEEECCCCEEE-EE--CCEEEEEECCCCCEEEEECCCCC
Q ss_conf 8858999747986999988788299999---449987311647907983998-41--88289975267703677237776
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEY---PLEKGWECNSVAATKAGEILF-SY--SKGAKMITRDGRELWNIAAPAGC 95 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~---~~~~~~~~~~~~~~pdG~~l~-s~--~~~v~~~~~~~~~~~~~~~~~~~ 95 (294)
..+++.+...+++|...+.+.++...+. .......+..+++++.+..|+ +. .+.+..++.++............
T Consensus 41 ~~~vYwsd~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~P~giavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 120 (316)
T 1ijq_A 41 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS 120 (316)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC
T ss_pred CCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCC
T ss_conf 99999999999989999897887553367885258889767999679997999967897179994699818999749977
Q ss_pred CEEEEEECCCCCEEEEEEC-CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE-ECCCEEEEEECCC
Q ss_conf 3148787378758999705-8979999856895889997067767766740089996998999997-4698899993788
Q T0558 96 EMQTARILPDGNALVAWCG-HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL-FATSEVREIAPNG 173 (294)
Q Consensus 96 ~v~~~~~~~dg~~l~~~s~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g-~~d~~i~~~d~~g 173 (294)
...++++.|.+.+++.... ....+.-...+|.......... ......++++++++.|+.. ...+.|..+|.+|
T Consensus 121 ~p~~i~vd~~~g~l~~~~~~~~~~i~~~~~dg~~~~~~~~~~-----~~~p~glaiD~~~~~lY~~d~~~~~I~~~~~dG 195 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN-----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS-----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEEECC-----CCCCCEEEEEECCCEEEEEECCCCEEEEEECCC
T ss_conf 876069953535178983589656999715787069998568-----767515688604768999968999899997999
Q ss_pred CEEEEEEC----CCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 58898516----97348988734896899735898799998789859998
Q T0558 174 QLLNSVKL----SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRR 219 (294)
Q Consensus 174 ~~~~~~~~----~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~ 219 (294)
........ -..|.++++. ++.++++...++.|+.++..+|+-...
T Consensus 196 ~~~~~~~~~~~~~~~P~glav~-~~~lyw~d~~~~~I~~~n~~~g~~~~~ 244 (316)
T 1ijq_A 196 GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNL 244 (316)
T ss_dssp CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred CCCEEEEECCCCCCCCEEEEEE-CCEEEEEECCCCEEEEEECCCCCCEEE
T ss_conf 9606999367766895678880-999999989999599997999952299
No 190
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.96 E-value=0.0011 Score=42.24 Aligned_cols=155 Identities=12% Similarity=-0.057 Sum_probs=68.5
Q ss_pred CCEEEEECCCCEEE-EE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE
Q ss_conf 11647907983998-41--8828997526770367723777631487873787589997058979999856895889997
Q T0558 57 CNSVAATKAGEILF-SY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTE 133 (294)
Q Consensus 57 ~~~~~~~pdG~~l~-s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~ 133 (294)
+..+++.+..+.++ +. ++.++..+.++.............+.++++..-++.++.+......+.....+|+......
T Consensus 38 ~~~l~~D~~~~~iYwsd~~~~~I~~~~l~g~~~~~i~~~~~~~p~giAvD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~ 117 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF 117 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred EEEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCEEEEEE
T ss_conf 89999983899999999999939999888994499992899997769998279979999277882068947993478885
Q ss_pred CCCCCCCCCCCCCEEEECCCCCEEEEEEC---CCEEEEEECCCCEEEEEE--CCCEEEEEEEECCC-CEEEECCCCCEEE
Q ss_conf 06776776674008999699899999746---988999937885889851--69734898873489-6899735898799
Q T0558 134 FETGIERPHAQFRQINKNKKGNYLVPLFA---TSEVREIAPNGQLLNSVK--LSGTPFSSAFLDNG-DCLVACGDAHCFV 207 (294)
Q Consensus 134 ~~~~~~~~~~~~~~~~~s~dG~~i~~g~~---d~~i~~~d~~g~~~~~~~--~~~~~~~~~~~~~g-~~~v~~~~~~~i~ 207 (294)
.. .......++..|.+.+++.... ...|...+.+|....... .-..|.++++.+.+ ..+++....+.|.
T Consensus 118 ~~-----~~~~p~~iavdp~~g~ly~~~~~~~~~~I~r~~~dG~~~~~i~~~~l~~P~glaiD~~~~~lY~~D~~~~~I~ 192 (267)
T 1npe_A 118 DT-----GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp CS-----SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CC-----CCCCCEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEE
T ss_conf 16-----6679708999366783999216899757999835889717767622478517998388888999958999899
Q ss_pred EEECCCCEE
Q ss_conf 998789859
Q T0558 208 QLNLESNRI 216 (294)
Q Consensus 208 ~~d~~~g~~ 216 (294)
.+|..++..
T Consensus 193 ~~d~~g~~~ 201 (267)
T 1npe_A 193 CLNPAQPGR 201 (267)
T ss_dssp EEETTEEEE
T ss_pred EEECCCCCE
T ss_conf 998999967
No 191
>1orv_A Dipeptidyl peptidase IV; serine protease, mechanism, oxyanion HOLE, substrate channeling, drug design, diabetes mellitus, hydrolase; HET: NAG BMA; 1.80A {Sus scrofa} SCOP: b.70.3.1 c.69.1.24 PDB: 1orw_A* 2aj8_A* 2ajb_A* 2ajc_A* 2ajd_A* 2bua_A* 2buc_A* 2jid_A* 2bgr_A* 1wcy_A* 1j2e_A* 2qjr_A* 3f8s_A* 2rgu_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* ...
Probab=97.92 E-value=0.00057 Score=44.41 Aligned_cols=137 Identities=12% Similarity=0.062 Sum_probs=75.8
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEEC----CCCCCCCEEEEECCCCEEEEE-C----------CEEEEEECCCCC
Q ss_conf 8885899974798699998878829999944----998731164790798399841-8----------828997526770
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPL----EKGWECNSVAATKAGEILFSY-S----------KGAKMITRDGRE 85 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~----~~~~~~~~~~~~pdG~~l~s~-~----------~~v~~~~~~~~~ 85 (294)
++++++.. .++.+.++|..+++..--+.. .....+....++|||++++.. + ....++|.++++
T Consensus 26 ~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD~~~~l~~~~~~~~~r~s~~~~~~i~d~~t~~ 103 (728)
T 1orv_A 26 SDHEYLYK--QENNILLFNAEYGNSSIFLENSTFDELGYSTNDYSVSPDRQFILFEYNYVKQWRHSYTASYDIYDLNKRQ 103 (728)
T ss_dssp SSSEEEEE--ETTEEEEEETTTCCCEEEECTTCCCCCSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCCEEEEE--CCCCEEEEECCCCCEEEEECHHHHHHCCCCCCEEEECCCCCEEEEEECCEECEEECCCEEEEEEECCCCC
T ss_conf 99869998--2990899987899489997456642147654338998999979999777411033363019999899997
Q ss_pred EEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCC----CC---------CCCCCEEEECC
Q ss_conf 367723777631487873787589997058979999856895889997067767----76---------67400899969
Q T0558 86 LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIE----RP---------HAQFRQINKNK 152 (294)
Q Consensus 86 ~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~----~~---------~~~~~~~~~s~ 152 (294)
...... ....+..+.|+|||+.++.... ..+++....+++..+ ....+... +. ......+.++|
T Consensus 104 ~~~~~~-~~~~~~~~~wSPDG~~iAfv~~-~nLyv~~~~~~~~~~-lT~dg~~~~~~~g~~dwv~~ee~~~~~~~~~wSp 180 (728)
T 1orv_A 104 LITEER-IPNNTQWITWSPVGHKLAYVWN-NDIYVKNEPNLSSQR-ITWTGKENVIYNGVTDWVYEEEVFSAYSALWWSP 180 (728)
T ss_dssp ECCSSC-CCTTBSEEEECSSTTCEEEEET-TEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTTSSSBCEEECT
T ss_pred CCCCCC-CCCCCCEEEECCCCCEEEEEEC-CEEEEEECCCCCEEE-ECCCCCCCCEECCCCCCCCCEEECCCCCCEEECC
T ss_conf 834557-8775412599999998999989-808999889997598-5158985613167514332101125666259899
Q ss_pred CCCEEEEEEC
Q ss_conf 9899999746
Q T0558 153 KGNYLVPLFA 162 (294)
Q Consensus 153 dG~~i~~g~~ 162 (294)
||++|+....
T Consensus 181 Dg~~ia~~~~ 190 (728)
T 1orv_A 181 NGTFLAYAQF 190 (728)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEEE
T ss_conf 9882637885
No 192
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.81 E-value=0.002 Score=40.44 Aligned_cols=25 Identities=8% Similarity=0.089 Sum_probs=13.4
Q ss_pred CCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf 48968997358987999987898599
Q T0558 192 DNGDCLVACGDAHCFVQLNLESNRIV 217 (294)
Q Consensus 192 ~~g~~~v~~~~~~~i~~~d~~~g~~~ 217 (294)
.+|+++++...+++|+.+++ +|.+.
T Consensus 389 ~~gniYVaD~~Nh~IRki~~-~G~Vt 413 (496)
T 3kya_A 389 EEYDFYFVDRLNFCVRKVTP-EGIVS 413 (496)
T ss_dssp CCEEEEEEEGGGTEEEEECT-TCBEE
T ss_pred CCCEEEEEECCCCEEEEECC-CCCEE
T ss_conf 89809999789986999999-99799
No 193
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.75 E-value=0.0024 Score=39.82 Aligned_cols=229 Identities=10% Similarity=0.061 Sum_probs=108.8
Q ss_pred CEEEEECCC--CEEEEEC--CEEEEEECCCCCEEEEECC---CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC---
Q ss_conf 164790798--3998418--8289975267703677237---77631487873787589997058979999856895---
Q T0558 58 NSVAATKAG--EILFSYS--KGAKMITRDGRELWNIAAP---AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGE--- 127 (294)
Q Consensus 58 ~~~~~~pdG--~~l~s~~--~~v~~~~~~~~~~~~~~~~---~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~--- 127 (294)
..+++.|++ +++++.. ..++.++..++.+...... .......+++.+.+...+. .....++....++.
T Consensus 142 ~~la~Dp~~~~~LYVad~~n~~Ir~id~~~~~Vtt~~~~g~~~~~~~~~~a~~~~~~~~~~--~~~~~~v~~~~~~~~~~ 219 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD--EAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC--TTCEEEEEECCCTTGGG
T ss_pred CEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEECCCCCEEEE--CCCCEEEEECCCCCEEE
T ss_conf 5599822699769999569984999978999899986357667788651400477766996--79968999768986266
Q ss_pred --EEEEEECCCCC----------CCCCCCCCEEEECC-CCCEEEEEECCCEEEEEECCCCE-------------------
Q ss_conf --88999706776----------77667400899969-98999997469889999378858-------------------
Q T0558 128 --VLSKTEFETGI----------ERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPNGQL------------------- 175 (294)
Q Consensus 128 --~~~~~~~~~~~----------~~~~~~~~~~~~s~-dG~~i~~g~~d~~i~~~d~~g~~------------------- 175 (294)
.++........ .........++++| ||.+.++-..+++|+.++..+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~giav~p~dG~lYv~d~~~~~I~r~d~~~~~~~~~~~~~~~~~~~~~~~~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CCCEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 25458998711355256687402312689725999789993999987796699985899669981577655566777553
Q ss_pred ---EEEEECCCEEEEEEEECCCCE-EEECCCCCEEEEEECCCCEEEE----EE-CC------CCCCCE--EECCCCCEEE
Q ss_conf ---898516973489887348968-9973589879999878985999----84-48------876411--4113453489
Q T0558 176 ---LNSVKLSGTPFSSAFLDNGDC-LVACGDAHCFVQLNLESNRIVR----RV-NA------NDIEGV--QLFFVAQLFP 238 (294)
Q Consensus 176 ---~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~i~~~d~~~g~~~~----~~-~~------~~~~~~--~~~~~~~~~~ 238 (294)
+........+..+.+.|+|++ +++....++|+.++........ .+ .. .+..+. .+..+.+..+
T Consensus 300 ~~~~~~~~~~~~~~~i~~~p~g~~lYvad~~~~~I~~~~~~~~~~~~~~~~~~aG~~g~~G~~DG~g~~A~f~~P~~~~~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred CCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEECCCCEECCCCCCCCCCCCCCCEEEECCCCEEEE
T ss_conf 21001356678741389847999899997799879999379956995235432277686446787113258248701688
Q ss_pred --------CCCCCEEEEECCCCEEECC-----------------------------------CCCCCEEEEECCCCCEEE
Q ss_conf --------3899899980467714302-----------------------------------477756999908998999
Q T0558 239 --------LQNGGLYICNWQGHDREAG-----------------------------------KGKHPQLVEIDSEGKVVW 275 (294)
Q Consensus 239 --------~~~G~i~i~~~~~~~~~~~-----------------------------------~~~~~~~~~i~~~G~~vW 275 (294)
..+|++|++.+..|.++.. .-..|.-+++|++|++++
T Consensus 380 ~~~~~~a~d~~gniYVaD~~Nh~IRki~~~G~VtT~aG~g~~~~~~dg~~~g~~dg~~~~~A~f~~P~giavd~~g~~~Y 459 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFY 459 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEE
T ss_pred ECCCCEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCEEE
T ss_conf 25743235589809999789986999999997999965786576667874565688745552728961799969999999
Q ss_pred EE-ECCCCEEEEEE
Q ss_conf 98-35885378886
Q T0558 276 QL-NDKVKFGMIST 288 (294)
Q Consensus 276 ~~-~~~~~~~~i~~ 288 (294)
-. ..+.++.+|+.
T Consensus 460 VaD~~N~rIRki~~ 473 (496)
T 3kya_A 460 VHDQVGHTIRTISM 473 (496)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEECCCCEEEEEEC
T ss_conf 99899998999967
No 194
>1orv_A Dipeptidyl peptidase IV; serine protease, mechanism, oxyanion HOLE, substrate channeling, drug design, diabetes mellitus, hydrolase; HET: NAG BMA; 1.80A {Sus scrofa} SCOP: b.70.3.1 c.69.1.24 PDB: 1orw_A* 2aj8_A* 2ajb_A* 2ajc_A* 2ajd_A* 2bua_A* 2buc_A* 2jid_A* 2bgr_A* 1wcy_A* 1j2e_A* 2qjr_A* 3f8s_A* 2rgu_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* ...
Probab=97.75 E-value=0.0017 Score=40.92 Aligned_cols=97 Identities=9% Similarity=-0.006 Sum_probs=65.0
Q ss_pred CCCCCCCEEEEECC---------CCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEE-EECCEEEEEECCCCCEE
Q ss_conf 14788858999747---------986999988788299999449987311647907983998-41882899752677036
Q T0558 18 QGSSPQHLLVGGSG---------WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELW 87 (294)
Q Consensus 18 ~~s~~~~~l~~gs~---------~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~-s~~~~v~~~~~~~~~~~ 87 (294)
+.|++++.|+..+. .+.+.++|.+++++.-. .........+.++|||+.++ ..++++++.+..+++..
T Consensus 68 ~~SpD~~~~l~~~~~~~~~r~s~~~~~~i~d~~t~~~~~~--~~~~~~~~~~~wSPDG~~iAfv~~~nLyv~~~~~~~~~ 145 (728)
T 1orv_A 68 SVSPDRQFILFEYNYVKQWRHSYTASYDIYDLNKRQLITE--ERIPNNTQWITWSPVGHKLAYVWNNDIYVKNEPNLSSQ 145 (728)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS--SCCCTTBSEEEECSSTTCEEEEETTEEEEESSTTSCCE
T ss_pred EECCCCCEEEEEECCEECEEECCCEEEEEEECCCCCCCCC--CCCCCCCCEEEECCCCCEEEEEECCEEEEEECCCCCEE
T ss_conf 9989999799997774110333630199998999978345--57877541259999999899998980899988999759
Q ss_pred EEEC-CCCCC-----------------EEEEEECCCCCEEEEEECCC
Q ss_conf 7723-77763-----------------14878737875899970589
Q T0558 88 NIAA-PAGCE-----------------MQTARILPDGNALVAWCGHP 116 (294)
Q Consensus 88 ~~~~-~~~~~-----------------v~~~~~~~dg~~l~~~s~~~ 116 (294)
+.+. +.... ..+..|+|||++++....+.
T Consensus 146 ~lT~dg~~~~~~~g~~dwv~~ee~~~~~~~~~wSpDg~~ia~~~~d~ 192 (728)
T 1orv_A 146 RITWTGKENVIYNGVTDWVYEEEVFSAYSALWWSPNGTFLAYAQFND 192 (728)
T ss_dssp ECCSCCBTTTEEESBCCHHHHHHTTSSSBCEEECTTSSEEEEEEEEC
T ss_pred EECCCCCCCCEECCCCCCCCCEEECCCCCCEEECCCCCEEEEEEEEC
T ss_conf 85158985613167514332101125666259899988263788505
No 195
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.70 E-value=0.0013 Score=41.74 Aligned_cols=98 Identities=15% Similarity=0.034 Sum_probs=66.6
Q ss_pred CCCCCCCCEEEEECC---------CCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEE-EECCEEEEEECCCCCE
Q ss_conf 014788858999747---------986999988788299999449987311647907983998-4188289975267703
Q T0558 17 AQGSSPQHLLVGGSG---------WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGREL 86 (294)
Q Consensus 17 ~~~s~~~~~l~~gs~---------~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~-s~~~~v~~~~~~~~~~ 86 (294)
.+-|++++.++..+. .+.+.++|.++|++. +. ......+..+.++|||+.++ ..+.++++.+..+++.
T Consensus 65 ~~~SpDg~~il~~~~~~~~~r~s~~~~~~v~d~~~~~~~-~l-~~~~~~~~~~~wSPDGk~IAfv~~~nLyv~~~~~~~~ 142 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV-RG-NELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPP 142 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CS-SCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCC
T ss_pred EEECCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCEE-EC-CCCCCCCCEEEECCCCCEEEEEECCEEEEEECCCCCE
T ss_conf 489899997999977831136503442999989999688-66-7788764103899999989999898699998999974
Q ss_pred EEEEC-CCCCC-----------------EEEEEECCCCCEEEEEECCC
Q ss_conf 67723-77763-----------------14878737875899970589
Q T0558 87 WNIAA-PAGCE-----------------MQTARILPDGNALVAWCGHP 116 (294)
Q Consensus 87 ~~~~~-~~~~~-----------------v~~~~~~~dg~~l~~~s~~~ 116 (294)
.+... +.... ..+..|+|||++++....|.
T Consensus 143 ~~lT~dg~~~~~~~g~~d~vy~ee~~~~~~~~~WSpDg~~ia~~~~d~ 190 (719)
T 1z68_A 143 FQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp EECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred EEECCCCCCCCEECCCCCCEEHHHHCCCCCCEEECCCCCCCCEEEECC
T ss_conf 897268975735546633110000125666259899997333037548
No 196
>1qni_A Nitrous-oxide reductase; oxidoreductase, denitrification, MAD, electron transfer; 2.40A {Pseudomonas nautica} SCOP: b.6.1.4 b.69.3.1
Probab=97.60 E-value=0.0039 Score=38.34 Aligned_cols=185 Identities=11% Similarity=0.119 Sum_probs=123.6
Q ss_pred CCCCE-EEEECCCCEEEEEECCCCEEEEEEEC-------------------CC--C---CCCC--EEEEEC---CCCEEE
Q ss_conf 88858-99974798699998878829999944-------------------99--8---7311--647907---983998
Q T0558 21 SPQHL-LVGGSGWNKIAIINKDTKEIVWEYPL-------------------EK--G---WECN--SVAATK---AGEILF 70 (294)
Q Consensus 21 ~~~~~-l~~gs~~~~i~~~d~~tg~~~w~~~~-------------------~~--~---~~~~--~~~~~p---dG~~l~ 70 (294)
-++.+ +.+|...+.|+++-.-++.++.+.+. +. . ...+ .++++. ||++++
T Consensus 17 ~Deyy~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~esk~~l~~~~~~~~gD~HHP~~S~TdgtyDGrylF 96 (581)
T 1qni_A 17 LDEYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLF 96 (581)
T ss_dssp CCSEEEEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEE
T ss_conf 65579994078662389995488635877021457877355877779998658885378876886430217854632899
Q ss_pred EEC---CEEEEEECCCCCEEEE-ECCCCCCEEEEEECCCCC--EEEEEECCCC-----------------EEEEECCCCC
Q ss_conf 418---8289975267703677-237776314878737875--8999705897-----------------9999856895
Q T0558 71 SYS---KGAKMITRDGRELWNI-AAPAGCEMQTARILPDGN--ALVAWCGHPS-----------------TILEVNMKGE 127 (294)
Q Consensus 71 s~~---~~v~~~~~~~~~~~~~-~~~~~~~v~~~~~~~dg~--~l~~~s~~~~-----------------~~~~~~~~G~ 127 (294)
..+ ..+-.++.+.-++.+. ..+....++++++.++++ |++..+++.. ....+..+.+
T Consensus 97 VNDkan~RVAvIDldtfkt~qIieIPn~~g~HG~~f~k~p~T~YV~~~~ef~vP~pndg~~~~~~~~~~~f~~VD~etm~ 176 (581)
T 1qni_A 97 INDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMD 176 (581)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCS
T ss_pred EECCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 97688973899987443365789788876887302405798559972564466658877523456651258988453373
Q ss_pred EEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECC----------------------------------------CEEE
Q ss_conf 889997067767766740089996998999997469----------------------------------------8899
Q T0558 128 VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT----------------------------------------SEVR 167 (294)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d----------------------------------------~~i~ 167 (294)
..|+...... ...+++++||++.++.+.+ ..|.
T Consensus 177 v~~QV~V~g~-------l~~~d~s~dGk~af~TsyNsE~~~~l~~~s~~d~D~vvV~N~~~ie~~vk~Gk~~~i~g~~V~ 249 (581)
T 1qni_A 177 VAWQVIVDGN-------LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVP 249 (581)
T ss_dssp EEEEEEESSC-------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCC
T ss_pred EEEEEECCCC-------HHHCEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECHHHHHHHHCCCCEEEECCCCCE
T ss_conf 7489836998-------200325688996999984277635641211145207999654886765316984891798725
Q ss_pred EEEC-C-CCEEEEEECCCEEEEEEEECCCCEEEEC-CCCCEEEEEECC
Q ss_conf 9937-8-8588985169734898873489689973-589879999878
Q T0558 168 EIAP-N-GQLLNSVKLSGTPFSSAFLDNGDCLVAC-GDAHCFVQLNLE 212 (294)
Q Consensus 168 ~~d~-~-g~~~~~~~~~~~~~~~~~~~~g~~~v~~-~~~~~i~~~d~~ 212 (294)
+.|. . .+.++....+..|+.+..+|||++++++ .-+..+.++|.+
T Consensus 250 VID~~~~s~vt~~IPvpKsPHGV~VSPDGkYi~vsGKLSpTVSVID~~ 297 (581)
T 1qni_A 250 VVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAID 297 (581)
T ss_dssp EEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGG
T ss_pred EEECCCCCCEEEEEECCCCCCCEEECCCCCEEEEECCCCCCEEEEEHH
T ss_conf 863676776389961488988758789997899948639922899757
No 197
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.59 E-value=0.004 Score=38.26 Aligned_cols=186 Identities=8% Similarity=-0.050 Sum_probs=102.7
Q ss_pred CCCCCCCCEEEEE---CCC--CEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE--C----------------
Q ss_conf 0147888589997---479--8699998878829999944998731164790798399841--8----------------
Q T0558 17 AQGSSPQHLLVGG---SGW--NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--S---------------- 73 (294)
Q Consensus 17 ~~~s~~~~~l~~g---s~~--~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~--~---------------- 73 (294)
.+.|++++.|+-- ..+ ..|++++.++|+...-... ..+....++|||+.++.. .
T Consensus 64 P~wSPDG~~laf~s~~~~~~~~~l~~~~~~gg~~~~l~~~---~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~~ 140 (347)
T 2gop_A 64 PRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA---KNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAW 140 (347)
T ss_dssp EEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE---SEEEEEEECTTSSEEEEEEECCCC---------CCCC
T ss_pred EEECCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEECC---CCEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCC
T ss_conf 6988799999999974799965999998888845985417---8414447889999899998214665442013301222
Q ss_pred -----------CEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCC------EEEEECCCCCEEEEEECCC
Q ss_conf -----------82899752677036772377763148787378758999705897------9999856895889997067
Q T0558 74 -----------KGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPS------TILEVNMKGEVLSKTEFET 136 (294)
Q Consensus 74 -----------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~------~~~~~~~~G~~~~~~~~~~ 136 (294)
..++.++..++......... ......+++++..+++...+.. ........++ .....
T Consensus 141 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--- 214 (347)
T 2gop_A 141 FDDLGFFDGEKTTFWIFDTESEEVIEEFEKP--RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMF--- 214 (347)
T ss_dssp ---------CEEEEEEEETTTTEEEEEEEEE--TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EEEEE---
T ss_pred CCCCEEEECCCCEEEEEECCCCEEEECCCCC--CCCCCEEECCCEEEEEEECCCCCCEEEEEEEEEECCCC-EEEEE---
T ss_conf 3541377615540577606457057535667--30233571198799998179971102444788602562-47876---
Q ss_pred CCCCCCCCCCEEEECCCCCEEEEEECC------CEEEEEECCCCEEEEE-ECCCEEEEEEEECCCCEEEECCCCCEEEEE
Q ss_conf 767766740089996998999997469------8899993788588985-169734898873489689973589879999
Q T0558 137 GIERPHAQFRQINKNKKGNYLVPLFAT------SEVREIAPNGQLLNSV-KLSGTPFSSAFLDNGDCLVACGDAHCFVQL 209 (294)
Q Consensus 137 ~~~~~~~~~~~~~~s~dG~~i~~g~~d------~~i~~~d~~g~~~~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~ 209 (294)
.......++|||+.|+....+ ..+++++..+...... ...+.....+...++..++....++...++
T Consensus 215 ------~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~i~~~~~~~g~~~l~ 288 (347)
T 2gop_A 215 ------EKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYDGKEVMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY 288 (347)
T ss_dssp ------EEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEECSSCEEESSTTCCSEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred ------EEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCEEEEEEECCCEEEEE
T ss_conf ------52002334688999999975777887552499965898368851689974666794699899999469989999
Q ss_pred ECCCCEEEE
Q ss_conf 878985999
Q T0558 210 NLESNRIVR 218 (294)
Q Consensus 210 d~~~g~~~~ 218 (294)
... |++..
T Consensus 289 ~~d-G~~~~ 296 (347)
T 2gop_A 289 IWD-GEIKP 296 (347)
T ss_dssp EES-SSEEE
T ss_pred ECC-CCEEE
T ss_conf 929-94899
No 198
>2hu5_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase, beta-propeller, enzyme-inhibitor complex; HET: PHE; 2.00A {Aeropyrum pernix} SCOP: b.69.7.2 c.69.1.33 PDB: 1ve7_A* 1ve6_A* 2hu7_A* 2hu8_A* 2qr5_A 2qzp_A
Probab=97.35 E-value=0.0077 Score=36.15 Aligned_cols=183 Identities=10% Similarity=-0.004 Sum_probs=81.9
Q ss_pred CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCC-EEEEEC-------CEEEEEECCC-CCEEEEECCC
Q ss_conf 858999747986999988788299999449987311647907983-998418-------8289975267-7036772377
Q T0558 23 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILFSYS-------KGAKMITRDG-RELWNIAAPA 93 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~-~l~s~~-------~~v~~~~~~~-~~~~~~~~~~ 93 (294)
+++++....+++..++-.++|+.+ +.... ... .+....++.. ++++.| ..++..+... ...+......
T Consensus 34 ~~l~f~s~~~G~~~i~~~dgg~~~-~lt~~-p~~-~~~~p~~~~~~i~f~~d~~~G~e~~~l~~~~~~~~~~~~~i~~~~ 110 (582)
T 2hu5_A 34 DKLLVVGFSEGSVNAYLYDGGETV-KLNRE-PIN-SVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK 110 (582)
T ss_dssp TEEEEEEEETTEEEEEEESSSSCE-ECCSS-CCS-EECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSC
T ss_pred CEEEEEEECCCCEEEEEECCCCEE-EEECC-CCC-CCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCEECCCC
T ss_conf 989999917997899997589525-62047-776-567767877779998547788632436986278875222202688
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE----ECCCEEEEE
Q ss_conf 7631487873787589997058979999856895889997067767766740089996998999997----469889999
Q T0558 94 GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL----FATSEVREI 169 (294)
Q Consensus 94 ~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g----~~d~~i~~~ 169 (294)
...+..+.+..++..++... ...+.+.....|+.. +..... ......+++|+.++.. .....+++.
T Consensus 111 ~~~i~~~~~~~~~~~~~~~~-~~~i~~~~i~~g~~~-~lt~~~--------~~~~~~~~~g~~i~~~~~~~~~~~~l~~~ 180 (582)
T 2hu5_A 111 PMRILSGVDTGEAVVFTGAT-EDRVALYALDGGGLR-ELARLP--------GFGFVSDIRGDLIAGLGFFGGGRVSLFTS 180 (582)
T ss_dssp SBEEEEEEECSSCEEEEEEC-SSCEEEEEEETTEEE-EEEEES--------SCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred CEEEEEEEECCCCEEEECCC-CCCEEEEECCCCCEE-ECCCCC--------CCCCCCCCCCCEEEEEEEECCCCCEEEEE
T ss_conf 54777752549943894587-574799995799778-611489--------87410279998699999506986649999
Q ss_pred ECCCCEEEEEEC-CCEEEEEEEECCCCEEEEC--CCCCEEEEEECCCCEEEE
Q ss_conf 378858898516-9734898873489689973--589879999878985999
Q T0558 170 APNGQLLNSVKL-SGTPFSSAFLDNGDCLVAC--GDAHCFVQLNLESNRIVR 218 (294)
Q Consensus 170 d~~g~~~~~~~~-~~~~~~~~~~~~g~~~v~~--~~~~~i~~~d~~~g~~~~ 218 (294)
|..+........ .+...+..++|||+.++.. .....++.+|.++|+...
T Consensus 181 dl~tg~~~~lt~~~g~~~~p~~SpDg~~ia~~~~~~~~~l~~~d~~~g~~~~ 232 (582)
T 2hu5_A 181 NLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVED 232 (582)
T ss_dssp ETTTEEEEEECBTTEEEEEEEECTTSCEEEEEEESSCEEEEEECTTTCCEEE
T ss_pred ECCCCCEEEEECCCCCEECEEECCCCCEEEEEECCCCCEEEEEECCCCCEEE
T ss_conf 9999978997478984005078899866999966986326899637885345
No 199
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.11 E-value=0.014 Score=34.37 Aligned_cols=67 Identities=6% Similarity=-0.099 Sum_probs=28.7
Q ss_pred CCCCCEEEEECCCCEEEEEECCCCEEE-EEEECCCCCCCCEEEEECCCCEEE-EECCEEEEEECCCCCEE
Q ss_conf 788858999747986999988788299-999449987311647907983998-41882899752677036
Q T0558 20 SSPQHLLVGGSGWNKIAIINKDTKEIV-WEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELW 87 (294)
Q Consensus 20 s~~~~~l~~gs~~~~i~~~d~~tg~~~-w~~~~~~~~~~~~~~~~pdG~~l~-s~~~~v~~~~~~~~~~~ 87 (294)
|++++.++.- .++.+++++..++... .+........+..+.++|||+.++ ..+..+++.+...+...
T Consensus 117 s~Dg~~l~f~-~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~SPDG~~iaf~~~~~l~~~~~~~~~~~ 185 (741)
T 2ecf_A 117 SPDAQRLLFP-LGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQM 185 (741)
T ss_dssp CTTSSEEEEE-ETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEE
T ss_pred CCCCCEEEEE-ECCEEEEEEECCCCCCCCEECCCCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCEE
T ss_conf 8999989999-89989999954898665265268987635328999999899997683588766888347
No 200
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine protease, proline-specific peptidase; HET: AIO; 1.95A {Porphyromonas gingivalis W83} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.03 E-value=0.016 Score=33.88 Aligned_cols=48 Identities=10% Similarity=0.032 Sum_probs=25.8
Q ss_pred ECCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 18828997526770367723777631487873787589997058979999
Q T0558 72 YSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILE 121 (294)
Q Consensus 72 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~ 121 (294)
..+.++++|...+.+.+.... ......+.|+|||+.++.... ..+++.
T Consensus 99 ~~~~~~~yd~~~~~~~~~~~~-~~~~~~~~wSPDG~~iAfv~~-~nlyv~ 146 (706)
T 2z3z_A 99 TQGGLVGFDMLARKVTYLFDT-NEETASLDFSPVGDRVAYVRN-HNLYIA 146 (706)
T ss_dssp ETTEEEEEETTTTEEEEEECC-TTCCTTCEECTTSSEEEEEET-TEEEEE
T ss_pred CCCEEEEEECCCCCEEECCCC-CCCCCCEEECCCCCEEEEEEC-CEEEEE
T ss_conf 598699999999909980379-987465189999998999999-938998
No 201
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.87 E-value=0.021 Score=32.94 Aligned_cols=26 Identities=15% Similarity=0.349 Sum_probs=12.8
Q ss_pred EEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 89973589879999878985999844
Q T0558 196 CLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 196 ~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
-++.+...+.+++||.+||+++.++.
T Consensus 195 ALvGtT~~n~ivIWnlkTGQLLkkm~ 220 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred HEECCCCCCEEEEEECCHHHHHHHEE
T ss_conf 20142345539999773254566431
No 202
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.87 E-value=0.021 Score=32.92 Aligned_cols=194 Identities=10% Similarity=-0.018 Sum_probs=121.6
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEE-EE--CCEEEEEECCCCCEEEEECCCCCCE
Q ss_conf 88858999747986999988788299999449987311647907983998-41--8828997526770367723777631
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SY--SKGAKMITRDGRELWNIAAPAGCEM 97 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~-s~--~~~v~~~~~~~~~~~~~~~~~~~~v 97 (294)
..++++.+-..++.|...+.+.++.. +........+..+++.+-+..|+ +. .+.+...+.+++............+
T Consensus 46 ~~~~iYwsd~~~~~I~~~~l~g~~~~-~i~~~~~~~p~giAvD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~p 124 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEPT-TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNP 124 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCE-EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSE
T ss_pred CCCEEEEEECCCCEEEEEECCCCCEE-EEEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCEEEEEECCCCCCC
T ss_conf 89999999999993999988899449-99928999977699982799799992778820689479934788851666797
Q ss_pred EEEEECCCCCEEEEEECCC-C-EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE-ECCCEEEEEECCCC
Q ss_conf 4878737875899970589-7-9999856895889997067767766740089996998999997-46988999937885
Q T0558 98 QTARILPDGNALVAWCGHP-S-TILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL-FATSEVREIAPNGQ 174 (294)
Q Consensus 98 ~~~~~~~dg~~l~~~s~~~-~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g-~~d~~i~~~d~~g~ 174 (294)
.++++.|.+.+++...... . .+.-...+|......... .-....+++++++++.|+.. ...+.|...|.+|.
T Consensus 125 ~~iavdp~~g~ly~~~~~~~~~~I~r~~~dG~~~~~i~~~-----~l~~P~glaiD~~~~~lY~~D~~~~~I~~~d~~g~ 199 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD-----NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT-----TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred EEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEE-----CCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCC
T ss_conf 0899936678399921689975799983588971776762-----24785179983888889999589998999989999
Q ss_pred EEEEEE-CCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 889851-69734898873489689973589879999878985999844
Q T0558 175 LLNSVK-LSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 175 ~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
...... ....|.+++.. ++..+++...++.|+.+|..+|+....+.
T Consensus 200 ~~~~i~~~~~~P~giav~-~~~lywtd~~~~~I~~~d~~~g~~~~~~~ 246 (267)
T 1npe_A 200 GRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred CEEEEECCCCCCEEEEEE-CCEEEEEECCCCEEEEEECCCCCEEEEEC
T ss_conf 679996899997899998-99999998999989999899994417989
No 203
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 2b5n_A
Probab=96.69 E-value=0.029 Score=31.99 Aligned_cols=103 Identities=12% Similarity=-0.030 Sum_probs=48.6
Q ss_pred CCCCCEEEEEC-CCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEC--CCCEEEEE--CCEEEEEECC--CCCEE--EEE
Q ss_conf 78885899974-7986999988788299999449987311647907--98399841--8828997526--77036--772
Q T0558 20 SSPQHLLVGGS-GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK--AGEILFSY--SKGAKMITRD--GRELW--NIA 90 (294)
Q Consensus 20 s~~~~~l~~gs-~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~p--dG~~l~s~--~~~v~~~~~~--~~~~~--~~~ 90 (294)
.....+++.+. .|+.+.+|+.++.+.+....++....+.++.+.+ +..+|+.+ ++.+..+..+ ...+. +..
T Consensus 568 ~~~s~~~~v~~~~d~~v~i~~l~~~~~~~~~~~~~~~~p~si~~~~~~~~~~L~ig~~~G~l~~~~~~~~~~~l~~~~~~ 647 (1158)
T 3ei3_A 568 NGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 647 (1158)
T ss_dssp TTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEE
T ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCEEEEEEE
T ss_conf 76663799851589989999929997865550588877517999872996389999589839999963677724357999
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 37776314878737875899970589799998
Q T0558 91 APAGCEMQTARILPDGNALVAWCGHPSTILEV 122 (294)
Q Consensus 91 ~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~ 122 (294)
.-...++....+..++...+.++++...+++.
T Consensus 648 ~lg~~pv~l~~~~~~~~~~v~~~~~~p~~~~~ 679 (1158)
T 3ei3_A 648 TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYS 679 (1158)
T ss_dssp ECCSSCCEEEEEESSSCEEEEEESSSCEEEEE
T ss_pred ECCCCCEEEEEEECCCCEEEEEECCCCEEEEE
T ss_conf 81663269999834995599997899899995
No 204
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8}
Probab=96.35 E-value=0.045 Score=30.55 Aligned_cols=24 Identities=13% Similarity=0.135 Sum_probs=12.9
Q ss_pred CCEEEEECCCCEEEEE-CCEEEEEE
Q ss_conf 1164790798399841-88289975
Q T0558 57 CNSVAATKAGEILFSY-SKGAKMIT 80 (294)
Q Consensus 57 ~~~~~~~pdG~~l~s~-~~~v~~~~ 80 (294)
+..++|.|||+++++. .+.++++.
T Consensus 33 P~~ma~~pdGrl~V~e~~G~I~~~~ 57 (352)
T 2ism_A 33 PWALAFLPDGGMLIAERPGRIRLFR 57 (352)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEE
T ss_pred CEEEEEECCCEEEEEECCCEEEEEE
T ss_conf 4599994989499997589799998
No 205
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.32 E-value=0.047 Score=30.41 Aligned_cols=26 Identities=19% Similarity=0.170 Sum_probs=12.9
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEE
Q ss_conf 88858999747986999988788299
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIV 46 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~ 46 (294)
+++++|++-...++|+++|..+++..
T Consensus 41 pdg~llVter~~G~i~~l~~~~~~~~ 66 (347)
T 3das_A 41 PGGDLLVSSRDEATITRVDAKTGRKT 66 (347)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred CCCEEEEEEECCCEEEEEECCCCCEE
T ss_conf 89909999964988999989999663
No 206
>2hu5_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase, beta-propeller, enzyme-inhibitor complex; HET: PHE; 2.00A {Aeropyrum pernix} SCOP: b.69.7.2 c.69.1.33 PDB: 1ve7_A* 1ve6_A* 2hu7_A* 2hu8_A* 2qr5_A 2qzp_A
Probab=95.74 E-value=0.084 Score=28.60 Aligned_cols=165 Identities=11% Similarity=0.021 Sum_probs=78.4
Q ss_pred CEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEE-CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEE
Q ss_conf 8699998878829999944998731164790798399841-882899752677036772377763148787378758999
Q T0558 33 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY-SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVA 111 (294)
Q Consensus 33 ~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~ 111 (294)
..+++.+.+.....++........+..+.+..++..+... ...++++..+++...+..... .....+.++++.++.
T Consensus 90 ~~l~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~i~~g~~~~lt~~~---~~~~~~~~~g~~i~~ 166 (582)
T 2hu5_A 90 HALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP---GFGFVSDIRGDLIAG 166 (582)
T ss_dssp EEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES---SCEEEEEEETTEEEE
T ss_pred CCEEEECCCCCCCCCEECCCCCEEEEEEEECCCCEEEECCCCCCEEEEECCCCCEEECCCCC---CCCCCCCCCCCEEEE
T ss_conf 43698627887522220268854777752549943894587574799995799778611489---874102799986999
Q ss_pred E--EC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECC--CEEEEEECCCCEEEEEE-----
Q ss_conf 7--05--8979999856895889997067767766740089996998999997469--88999937885889851-----
Q T0558 112 W--CG--HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT--SEVREIAPNGQLLNSVK----- 180 (294)
Q Consensus 112 ~--s~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d--~~i~~~d~~g~~~~~~~----- 180 (294)
. .. ...+++.+..+|+.. .... .........++|||++++....+ ..+..+|..+.......
T Consensus 167 ~~~~~~~~~~l~~~dl~tg~~~-~lt~------~~g~~~~p~~SpDg~~ia~~~~~~~~~l~~~d~~~g~~~~~~~~~~~ 239 (582)
T 2hu5_A 167 LGFFGGGRVSLFTSNLSSGGLR-VFDS------GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKD 239 (582)
T ss_dssp EEEEETTEEEEEEEETTTEEEE-EECB------TTEEEEEEEECTTSCEEEEEEESSCEEEEEECTTTCCEEECCCSSCH
T ss_pred EEEECCCCCEEEEEECCCCCEE-EEEC------CCCCEECEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 9950698664999999999789-9747------89840050788998669999669863268996378853456501366
Q ss_pred ----CCCEEEEEEEECCCCEEEECCCCCEEE
Q ss_conf ----697348988734896899735898799
Q T0558 181 ----LSGTPFSSAFLDNGDCLVACGDAHCFV 207 (294)
Q Consensus 181 ----~~~~~~~~~~~~~g~~~v~~~~~~~i~ 207 (294)
....+....+.++++.++....++...
T Consensus 240 ~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~~ 270 (582)
T 2hu5_A 240 FSSYRPTAITWLGYLPDGRLAVVARREGRSA 270 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEEETTEEE
T ss_pred CCCCCCCCCCCEEECCCCEEEEEEEECCEEE
T ss_conf 6743457632114558984999998478587
No 207
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholesterol metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.38 E-value=0.11 Score=27.71 Aligned_cols=48 Identities=8% Similarity=0.021 Sum_probs=21.5
Q ss_pred EEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEC---CEEEEEECCC
Q ss_conf 6999988788299999449987311647907983998418---8289975267
Q T0558 34 KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYS---KGAKMITRDG 83 (294)
Q Consensus 34 ~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~---~~v~~~~~~~ 83 (294)
.|+.++++..... ..+.+...+..+.+.+..++++..| +.|+....++
T Consensus 387 ~i~~~~~~~~~~~--~~~~~~~~~~~~d~d~~~~~~yw~d~~~~~i~~~~~~~ 437 (699)
T 1n7d_A 387 EVRKMTLDRSEYT--SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 437 (699)
T ss_dssp C-CEECTTSCCEE--CCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCC
T ss_pred EEEECCCCCCCCE--EEECCCCCCEEEEEECCCCEEEECCCCCCCEEEEEECC
T ss_conf 2453135666530--54158885168876636886886236788258998358
No 208
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholesterol metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.32 E-value=0.12 Score=27.56 Aligned_cols=159 Identities=11% Similarity=-0.007 Sum_probs=89.4
Q ss_pred CCEEEEECCCCEEE-EE--CCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCC-CEEEEECCCCCEEEEE
Q ss_conf 11647907983998-41--88289975267703677237776314878737875899970589-7999985689588999
Q T0558 57 CNSVAATKAGEILF-SY--SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHP-STILEVNMKGEVLSKT 132 (294)
Q Consensus 57 ~~~~~~~pdG~~l~-s~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg~~l~~~s~~~-~~~~~~~~~G~~~~~~ 132 (294)
+..+|+..-++.|+ +. .+.|.+.+.++.............+.++++.|...+|+.+.... ..+.....+|.-...+
T Consensus 455 ~~~la~D~~~~~lY~~d~~~~~i~v~~~~g~~~~~~~~~~~~~p~~i~vdp~~g~l~~~~~~~~~~I~r~~~dG~~~~~~ 534 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred CCEEEEEECCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEE
T ss_conf 75279971103279960688858989689996799896999986179995458989997279898799995788884897
Q ss_pred ECCCCCCCCCCCCCEEEECCCCCEEEEE-ECCCEEEEEECCCCEEEEEECC----CEEEEEEEECCCCEEEECCCCCEEE
Q ss_conf 7067767766740089996998999997-4698899993788588985169----7348988734896899735898799
Q T0558 133 EFETGIERPHAQFRQINKNKKGNYLVPL-FATSEVREIAPNGQLLNSVKLS----GTPFSSAFLDNGDCLVACGDAHCFV 207 (294)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~s~dG~~i~~g-~~d~~i~~~d~~g~~~~~~~~~----~~~~~~~~~~~g~~~v~~~~~~~i~ 207 (294)
.. .... ...++++....+.|+-. +..+.|...+.+|.....+... ..|+++++. ++.+|++......|.
T Consensus 535 ~~--~~~~---~p~~l~iD~~~~~lyw~d~~~~~i~~~~~~g~~~~~~~~~~~~~~~p~~l~~~-~~~~yw~d~~~~~i~ 608 (699)
T 1n7d_A 535 VT--ENIQ---WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIF 608 (699)
T ss_dssp SC--SSCS---SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEE-TTEEEEECSTTTCEE
T ss_pred EE--CCCC---CCCEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEE-CCEEEEEECCCCEEE
T ss_conf 85--8999---95056661788979999799997999847999628997089877898699998-999999979999799
Q ss_pred EEECCCCEEEEEEC
Q ss_conf 99878985999844
Q T0558 208 QLNLESNRIVRRVN 221 (294)
Q Consensus 208 ~~d~~~g~~~~~~~ 221 (294)
.++..+|+....+.
T Consensus 609 ~~~k~~g~~~~~~~ 622 (699)
T 1n7d_A 609 SANRLTGSDVNLLA 622 (699)
T ss_dssp EEETTTEEEEECCC
T ss_pred EEECCCCCCEEEEE
T ss_conf 99798997418973
No 209
>3gc3_B Arrestin beta-1, clathrin heavy chain 1; protein-protein complex, alternative splicing, phosphoprotein, sensory transduction, acetylation, coated PIT; 2.20A {Bos taurus} PDB: 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.97 E-value=0.15 Score=26.86 Aligned_cols=39 Identities=10% Similarity=0.098 Sum_probs=21.2
Q ss_pred CEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 734898873489689973589879999878985999844
Q T0558 183 GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 183 ~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
+-|.+...++.-+.++.-+..|.++++|.++|..+.+-.
T Consensus 259 DFPVamqvS~kygviyviTK~G~i~lyDleTgt~i~~nR 297 (363)
T 3gc3_B 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (363)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 855589721557889999667489999757660899953
No 210
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=94.90 E-value=0.15 Score=26.74 Aligned_cols=30 Identities=20% Similarity=0.185 Sum_probs=14.0
Q ss_pred CEEEEEECC-----CCEEEEEEECCC-CCCCCEEEE
Q ss_conf 869999887-----882999994499-873116479
Q T0558 33 NKIAIINKD-----TKEIVWEYPLEK-GWECNSVAA 62 (294)
Q Consensus 33 ~~i~~~d~~-----tg~~~w~~~~~~-~~~~~~~~~ 62 (294)
..+..+|.+ -||++++.++.+ +.+.++.-+
T Consensus 43 D~LatVDvdP~S~tYgqVIhrl~~p~~gdElHH~Gw 78 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGW 78 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEE
T ss_pred CEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC
T ss_conf 748998689999983428899878987886553665
No 211
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane protein; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.82 E-value=0.16 Score=26.60 Aligned_cols=39 Identities=10% Similarity=0.098 Sum_probs=23.6
Q ss_pred CEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 734898873489689973589879999878985999844
Q T0558 183 GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 183 ~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
+-|.+...++.-+.++.-+..|.++++|.++|..+.+-.
T Consensus 259 DFPVamqvs~kygviyviTK~G~i~lyDletgt~i~~nr 297 (494)
T 1bpo_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 765478840437889999667379999857773899830
No 212
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 2b5n_A
Probab=93.98 E-value=0.23 Score=25.33 Aligned_cols=17 Identities=18% Similarity=0.218 Sum_probs=7.9
Q ss_pred CCEEEEECCCCEEEEEE
Q ss_conf 85899974798699998
Q T0558 23 QHLLVGGSGWNKIAIIN 39 (294)
Q Consensus 23 ~~~l~~gs~~~~i~~~d 39 (294)
..+|+.|..+|.+..++
T Consensus 617 ~~~L~ig~~~G~l~~~~ 633 (1158)
T 3ei3_A 617 SHYLLCALGDGALFYFG 633 (1158)
T ss_dssp EEEEEEEETTSEEEEEE
T ss_pred CCEEEEECCCCEEEEEE
T ss_conf 63899995898399999
No 213
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis/exocytosis complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A
Probab=93.37 E-value=0.3 Score=24.60 Aligned_cols=46 Identities=9% Similarity=0.039 Sum_probs=29.2
Q ss_pred CCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCC
Q ss_conf 9734898873489689973589879999878985999844887641
Q T0558 182 SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEG 227 (294)
Q Consensus 182 ~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 227 (294)
.+-|.+...++.-+.++.-+..|.++++|.+||..+.+-.-.....
T Consensus 258 ~DFPv~m~vs~kygviyiiTK~G~i~lyDleTgt~i~~nrIs~~~i 303 (1630)
T 1xi4_A 258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI 303 (1630)
T ss_pred CCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCE
T ss_conf 7872389973347889999657469999746663566703678862
No 214
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetical protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.47 E-value=0.39 Score=23.73 Aligned_cols=118 Identities=8% Similarity=0.023 Sum_probs=52.4
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECC--CCC-----EEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEE
Q ss_conf 631487873787589997058979999856--895-----8899970677677667400899969989999974698899
Q T0558 95 CEMQTARILPDGNALVAWCGHPSTILEVNM--KGE-----VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVR 167 (294)
Q Consensus 95 ~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~--~G~-----~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~d~~i~ 167 (294)
...++.+|+|++.++..+..++.+.++-.. .|. .-....... ......+..+.+. +.++++...|+.|+
T Consensus 130 ~~~hsf~w~p~~~~l~igne~~~l~if~l~~~~~~~~~~~~~~~~~i~k--~~~~~Wv~~i~~~--~~~Lv~~~sdNSv~ 205 (588)
T 2j04_A 130 RTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD--AGSKDWVTHIVWY--EDVLVAALSNNSVF 205 (588)
T ss_dssp TCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC--TTCCCCEEEEEEE--TTEEEEEETTCCEE
T ss_pred EEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCEEHHH--CCCCCCEEEEEEC--CCEEEEEECCCCEE
T ss_conf 0479999458863799985899489999714578740589713335212--2665325654322--42799993699589
Q ss_pred EEECCCC-E---EEEE--ECCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 9937885-8---8985--1697348988734896899735898799998789859998
Q T0558 168 EIAPNGQ-L---LNSV--KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRR 219 (294)
Q Consensus 168 ~~d~~g~-~---~~~~--~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~ 219 (294)
++..... . ..+. ..-.......+. ++..+++.. +.+++++..++..--.
T Consensus 206 ~~~v~~~~~~~~~~~i~~asRf~i~~~~~v-~~~~~it~t--g~l~~~~~~~~~~~s~ 260 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTCP--GYVHKIDLKNYSISSL 260 (588)
T ss_dssp EECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEECS--SEEEEEETTTTEEEEE
T ss_pred EEEECCCCCCCCCHHHCCCCCCEEECCCEE-CCEEEEEEC--CCEEEEEECCCCCCCE
T ss_conf 999626644676421134455425223254-557999967--9379999627863013
No 215
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein; 2.10A {Pseudomonas aeruginosa}
Probab=92.43 E-value=0.39 Score=23.70 Aligned_cols=151 Identities=13% Similarity=0.072 Sum_probs=88.2
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEE----CCCC--------------------CCCCEEEEEC-CCCEEEEE---
Q ss_conf 888589997479869999887882999994----4998--------------------7311647907-98399841---
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVWEYP----LEKG--------------------WECNSVAATK-AGEILFSY--- 72 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~----~~~~--------------------~~~~~~~~~p-dG~~l~s~--- 72 (294)
.-..++.+|+.|+.+.++|. +|+.+|.|- +.+- ..+..+.+.. ...+|+.+
T Consensus 83 ~R~~~vyvGaNdGmLHaf~~-~G~E~wafiP~~~l~~l~~l~~~~~~~~~h~y~vDg~p~~~d~~~~~~w~t~lv~g~g~ 161 (570)
T 3hx6_A 83 TRAPRVYVGANDGMLHGFDT-DGNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRA 161 (570)
T ss_dssp TCCCEEEEECSSSCEEECCS-SCCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTT
T ss_pred CCCCEEEEECCCEEEEEECC-CCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCC
T ss_conf 87627999888706999889-99082898799998767887505777777533328996798889779635999981388
Q ss_pred -CCEEEEEECCC----CCEEEEECCCCC------CEEEEEECCCCCEEE-EEEC------CCCEEEEECCCCCEEEEEEC
Q ss_conf -88289975267----703677237776------314878737875899-9705------89799998568958899970
Q T0558 73 -SKGAKMITRDG----RELWNIAAPAGC------EMQTARILPDGNALV-AWCG------HPSTILEVNMKGEVLSKTEF 134 (294)
Q Consensus 73 -~~~v~~~~~~~----~~~~~~~~~~~~------~v~~~~~~~dg~~l~-~~s~------~~~~~~~~~~~G~~~~~~~~ 134 (294)
...++.+|... ..+|+....... ..-.+...+++++++ .+++ ...+++.+..+|+.+|.+..
T Consensus 162 GG~~~yaLDvT~p~~p~~lw~~~~~~~~~LG~t~s~P~I~~~~~~~~v~vfG~Gy~~~~~~~~lyivd~~tG~~~~~~~~ 241 (570)
T 3hx6_A 162 GGKGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEV 241 (570)
T ss_dssp SCSEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEE
T ss_pred CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEE
T ss_conf 98569999478999863667753775445453246872532248956999777766678873499998888861238863
Q ss_pred CCCCCCCCCCCCEEEECCCC----CEEEEEECCCEEEEEECC
Q ss_conf 67767766740089996998----999997469889999378
Q T0558 135 ETGIERPHAQFRQINKNKKG----NYLVPLFATSEVREIAPN 172 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~s~dG----~~i~~g~~d~~i~~~d~~ 172 (294)
..................|+ .+++.+-..|.+..+|..
T Consensus 242 ~~~~~~~~~~s~~~~~d~d~dg~~d~vYagDl~Gnlwr~dl~ 283 (570)
T 3hx6_A 242 TGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLI 283 (570)
T ss_dssp CCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECS
T ss_pred CCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCEEEEEEE
T ss_conf 178886576455346615888700047842224726887666
No 216
>1h2w_A Prolyl endopeptidase; hydrolase, prolyl oligopeptidase, amnesia, alpha/ beta- hydrolase, beta-propeller, serine protease; 1.39A {Sus scrofa} SCOP: b.69.7.1 c.69.1.4 PDB: 1qfm_A 1qfs_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=92.36 E-value=0.4 Score=23.64 Aligned_cols=14 Identities=7% Similarity=0.271 Sum_probs=6.7
Q ss_pred EEEEEECCCCEEEE
Q ss_conf 79999878985999
Q T0558 205 CFVQLNLESNRIVR 218 (294)
Q Consensus 205 ~i~~~d~~~g~~~~ 218 (294)
.+..++..+++...
T Consensus 360 ~l~~~~~~~~~~~~ 373 (710)
T 1h2w_A 360 TLQLHDLATGALLK 373 (710)
T ss_dssp EEEEEETTTCCEEE
T ss_pred EEEEEECCCCEEEE
T ss_conf 58998078862674
No 217
>1v04_A Serum paraoxonase/arylesterase 1; hydrolase, directed evolution, antioxidant, israel structural proteomics center, ISPC, structural genomics; 2.2A {Homo sapiens} SCOP: b.68.6.2
Probab=91.05 E-value=0.55 Score=22.67 Aligned_cols=184 Identities=10% Similarity=0.022 Sum_probs=88.3
Q ss_pred CCCEEEEECCCCEEEEEC--------------CEEEEEECCCCC--EEEEE-CCC-----CCCEEEEEE--CCCCC-EEE
Q ss_conf 311647907983998418--------------828997526770--36772-377-----763148787--37875-899
Q T0558 56 ECNSVAATKAGEILFSYS--------------KGAKMITRDGRE--LWNIA-APA-----GCEMQTARI--LPDGN-ALV 110 (294)
Q Consensus 56 ~~~~~~~~pdG~~l~s~~--------------~~v~~~~~~~~~--~~~~~-~~~-----~~~v~~~~~--~~dg~-~l~ 110 (294)
.+.++++.|||..+.++. +.+.+++..... .++.. .+. .-..+.+.. ..||. +|+
T Consensus 51 g~EDi~~~~~g~~~i~sg~~~~~~~~~~~~~~G~i~~~d~~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~ 130 (355)
T 1v04_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEE
T ss_conf 85417997898499997666677666787888769999678998752698841798875643068766588689967689
Q ss_pred EEECCC---CEEE--EECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE-----------------CCCEEEE
Q ss_conf 970589---7999--98568958899970677677667400899969989999974-----------------6988999
Q T0558 111 AWCGHP---STIL--EVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF-----------------ATSEVRE 168 (294)
Q Consensus 111 ~~s~~~---~~~~--~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~-----------------~d~~i~~ 168 (294)
+..+.. .+-+ .........|........ ....+.+++.++|.+.++-. .-+.+..
T Consensus 131 vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~---~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~le~~~~~~~g~v~~ 207 (355)
T 1v04_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL---LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTT---CSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEE
T ss_pred EEECCCCCCEEEEEEEECCCCEEEEEEECCCCC---CCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 980688874189999966997499888203776---68986389977997899678777672355457875489247897
Q ss_pred EECCCCEEEEEECCCEEEEEEEECCCCE-EEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCC-CEEEC-CCCCEE
Q ss_conf 9378858898516973489887348968-99735898799998789859998448876411411345-34893-899899
Q T0558 169 IAPNGQLLNSVKLSGTPFSSAFLDNGDC-LVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVA-QLFPL-QNGGLY 245 (294)
Q Consensus 169 ~d~~g~~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~-~~G~i~ 245 (294)
||.+...... ..-..+..+.+++++++ +++.+..+++.+++......+..... ..+...+ ++.+. .+|++.
T Consensus 208 ~d~~~~~~~~-~~l~~pNGI~~s~d~~~lyV~~t~~~~i~~y~~~~~~~l~~~~~-----i~l~~~pDNi~~D~~~G~lw 281 (355)
T 1v04_A 208 YSPNDVRVVA-EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRV-----LSFDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp ECSSCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE-----EECSSEEEEEEECTTTCCEE
T ss_pred ECCCCEEEEC-CCCCCCCCEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEEE-----EECCCCCCCCEEECCCCEEE
T ss_conf 3698239973-78744785079899999999967899399999689864305787-----50898998038968999699
Q ss_pred EEE
Q ss_conf 980
Q T0558 246 ICN 248 (294)
Q Consensus 246 i~~ 248 (294)
+..
T Consensus 282 va~ 284 (355)
T 1v04_A 282 VGC 284 (355)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 997
No 218
>1cru_A Protein (soluble quinoprotein glucose dehydrogenase); beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.13 E-value=0.65 Score=22.11 Aligned_cols=47 Identities=9% Similarity=0.010 Sum_probs=22.9
Q ss_pred CCCCCCEEEEECCCCEEEEEECCCCEEEEEEECC-------CCCCCCEEEEECC
Q ss_conf 4788858999747986999988788299999449-------9873116479079
Q T0558 19 GSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLE-------KGWECNSVAATKA 65 (294)
Q Consensus 19 ~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~-------~~~~~~~~~~~pd 65 (294)
..++.++|++-...++|++++.++++..-...+. .......++++||
T Consensus 34 ~~pdg~llVter~~G~i~~v~~~~~~~~~~~~~~~~~~~~~ge~GLlgia~~P~ 87 (454)
T 1cru_A 34 WGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred EECCCEEEEEEECCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 908990999981488799998999967562478652103688874354797899
No 219
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structural genomics consortium, SGC, kelch repeat, nucleus; 1.63A {Homo sapiens}
Probab=89.77 E-value=0.69 Score=21.92 Aligned_cols=236 Identities=9% Similarity=-0.032 Sum_probs=110.5
Q ss_pred CCCCCCEEEEE-CCCCEEEEEECCCCEEEEEEECC-CCCCCCEEEEECCCCEEEEEC------CEEEEEECCCCCEEEEE
Q ss_conf 47888589997-47986999988788299999449-987311647907983998418------82899752677036772
Q T0558 19 GSSPQHLLVGG-SGWNKIAIINKDTKEIVWEYPLE-KGWECNSVAATKAGEILFSYS------KGAKMITRDGRELWNIA 90 (294)
Q Consensus 19 ~s~~~~~l~~g-s~~~~i~~~d~~tg~~~w~~~~~-~~~~~~~~~~~pdG~~l~s~~------~~v~~~~~~~~~~~~~~ 90 (294)
.+.+.++++.| +...++.++|..+++ |+.--. ......+.+...|+.+++.+. ..+.+||.... .|...
T Consensus 9 ~~~~~~~~~~Gg~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~v~~yd~~t~-~W~~~ 85 (306)
T 3ii7_A 9 KKHDYRIALFGGSQPQSCRYFNPKDYS--WTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKD-SWYSK 85 (306)
T ss_dssp -CCCEEEEEECCSSTTSEEEEETTTTE--EEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTT-EEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEECCCCE--EEECCCCCCCCEEEEEEEECCEEEEEECCCCCCCCEEEEEECCCC-EEEEC
T ss_conf 889869999947889859999499998--987999986615689999999999997999996613999989999-79878
Q ss_pred CCC--CCCEEEEEECCCCCEEEEEECCC------CEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEC
Q ss_conf 377--76314878737875899970589------7999985689588999706776776674008999699899999746
Q T0558 91 APA--GCEMQTARILPDGNALVAWCGHP------STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA 162 (294)
Q Consensus 91 ~~~--~~~v~~~~~~~dg~~l~~~s~~~------~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~~ 162 (294)
..- +-.-+++. .-+++.++++..+. .+.+++..++ .|+.... .. ...........++..++.+..
T Consensus 86 ~~lp~~R~~~~~~-~~~g~iyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~-~~---~~r~~~~~~~~~~~~~~~gg~ 158 (306)
T 3ii7_A 86 LGPPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTE--SWHTKPS-ML---TQRCSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp ECCSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTT--EEEEECC-CS---SCCBSCEEEEETTEEEEECCE
T ss_pred CCCCCCCCEEEEE-EECCEEEEECCCCCCCCCCCEEEEEECCCC--EEEECCC-CC---CCCCCCCEECCCCCEEEECCC
T ss_conf 9999755207899-978969998885335871476999968988--6965254-42---100133101138824875344
Q ss_pred ---------CCEEEEEECCCCEEEEEECCC--EEEEEEEECCCCEEEECCCC-----CEEEEEECCCCEEEEEECCCCCC
Q ss_conf ---------988999937885889851697--34898873489689973589-----87999987898599984488764
Q T0558 163 ---------TSEVREIAPNGQLLNSVKLSG--TPFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIVRRVNANDIE 226 (294)
Q Consensus 163 ---------d~~i~~~d~~g~~~~~~~~~~--~~~~~~~~~~g~~~v~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~ 226 (294)
...+..+|.....-....... .........++.+++.++.+ +.+..+|.++++ +..+.. .+
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~--lp 235 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE-WKMVSP--MP 235 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE-EEECCC--CS
T ss_pred CCCCCCCCEECCEEEECCCCCCCEECCCCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCE-EEECCC--CC
T ss_conf 798443300022003236657401138743453353267750279999787888864779998998896-998889--98
Q ss_pred CEEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCEEEE
Q ss_conf 11411345348938998999804677143024777569999089989999
Q T0558 227 GVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQ 276 (294)
Q Consensus 227 ~~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~vW~ 276 (294)
.. ........-++.+++.+.... ......+..+|.+.. .|.
T Consensus 236 ~~---r~~~~~~~~~~~iyi~GG~~~-----~~~~~~v~~yd~~~~-~W~ 276 (306)
T 3ii7_A 236 WK---GVTVKCAAVGSIVYVLAGFQG-----VGRLGHILEYNTETD-KWV 276 (306)
T ss_dssp CC---BSCCEEEEETTEEEEEECBCS-----SSBCCEEEEEETTTT-EEE
T ss_pred CC---CEEEEEEEECCEEEEEECCCC-----CCCCCEEEEEECCCC-EEE
T ss_conf 88---525599999999999956389-----973786999989999-899
No 220
>1qxm_A HA1; hemagglutinin, trefoil, toxin; 1.70A {Clostridium botulinum d phage} SCOP: b.42.2.1 b.42.2.1 PDB: 2ehm_A* 2ehi_A* 2ehn_A* 2e4m_A
Probab=88.85 E-value=0.8 Score=21.45 Aligned_cols=164 Identities=7% Similarity=0.064 Sum_probs=74.8
Q ss_pred HCCCCCCCCEEEEECCCCEEEEEECCCC-EEEEEEECCCCCCCCEEEEECCCCEEEEE---CCEEEEEECCC--CCEEEE
Q ss_conf 0014788858999747986999988788-29999944998731164790798399841---88289975267--703677
Q T0558 16 FAQGSSPQHLLVGGSGWNKIAIINKDTK-EIVWEYPLEKGWECNSVAATKAGEILFSY---SKGAKMITRDG--RELWNI 89 (294)
Q Consensus 16 ~~~~s~~~~~l~~gs~~~~i~~~d~~tg-~~~w~~~~~~~~~~~~~~~~pdG~~l~s~---~~~v~~~~~~~--~~~~~~ 89 (294)
+..+...+..++....+..|.+|+...+ ...|+|........+.+.=..+++++.+. ...+.++...+ .+.|..
T Consensus 30 ~~~~~~~~~~v~~~~~~~~V~lw~~n~~~nQkW~f~~~~~~~~Y~I~n~~~~~~~l~~~~~~~~v~~~~~~~~~nQ~W~i 109 (300)
T 1qxm_A 30 FISPSNNTNKVLDKISQSEVKLWNKLSGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTNGDNQYWYL 109 (300)
T ss_dssp EEEETTCTTEEEEECSSSCEEEEECCCCGGGCEEEEEETTTTEEEEEESSSSCCEEEECTTSSCEEEECCCCCGGGCEEE
T ss_pred EEEECCCCCEEEECCCCCCEEEECCCCCHHCCEEEEEECCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCCHHHCEEE
T ss_conf 99982897279850489728996689961070999996998879999889995898647899419998569986876898
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC-EEEEEECCCCCCCCCCCCCEEEECCCCC-EEEEEECCCEEE
Q ss_conf 23777631487873787589997058979999856895-8899970677677667400899969989-999974698899
Q T0558 90 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGE-VLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVR 167 (294)
Q Consensus 90 ~~~~~~~v~~~~~~~dg~~l~~~s~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~s~dG~-~i~~g~~d~~i~ 167 (294)
.......-.-+.-..++++++-......+.+|....+. -.|.+....... -......+.-..++. ++.+......|.
T Consensus 110 ~~~~~~g~~~i~n~~~~~~vl~~~~gs~v~~~~~~~~~~Q~w~~~~~~~~~-i~~g~y~I~~~~~~~~v~~~~~~~~~V~ 188 (300)
T 1qxm_A 110 LQNYISRNVIIRNYMNPNLVLQYNIDDTLMVSTQTSSSNQFFKFSNCIYEA-LNNRNCKLQTQLNSDRFLSKNLNSQIIV 188 (300)
T ss_dssp EECTTTCCEEEEESSCTTEEEEECTTSCEEEEECCSCGGGCEEEEEHHHHH-HTTEEEEEEETTCTTCEEEECTTSSBEE
T ss_pred EECCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCEEEEEEECCEEE-CCCCEEEEEECCCCCEEEEECCCCCEEE
T ss_conf 631799869999987774857526761699952789843278984032004-1684499998757988998259996489
Q ss_pred EEECC--CCEEEEEE
Q ss_conf 99378--85889851
Q T0558 168 EIAPN--GQLLNSVK 180 (294)
Q Consensus 168 ~~d~~--g~~~~~~~ 180 (294)
+|+.. ..+.|.+.
T Consensus 189 ~w~~~~~~nQ~W~~~ 203 (300)
T 1qxm_A 189 LWQWFDSSRQKWIIE 203 (300)
T ss_dssp EECCCCCGGGCEEEE
T ss_pred EEECCCCCCCEEEEE
T ss_conf 993699865248999
No 221
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=86.27 E-value=0.36 Score=23.95 Aligned_cols=42 Identities=14% Similarity=-0.012 Sum_probs=26.9
Q ss_pred ECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECC
Q ss_conf 348968997358987999987898599984488764114113
Q T0558 191 LDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFF 232 (294)
Q Consensus 191 ~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 232 (294)
..+++.++.++.+..+..+|.+++++...+.++...+-++.|
T Consensus 229 ~~~~~~l~t~s~d~t~~~~d~~w~~~~htf~gy~~GVR~v~F 270 (297)
T 2e31_A 229 SENEDVLAEFATGQVAVPEDGSWMEISHTFIDYGPGVRFVRF 270 (297)
T ss_dssp CTTCCEEEEEECCCEECCTTCCCEEEEEEECSCCSCCCEEEE
T ss_pred CCCCCEEEEECCCCEEECCCCEEEEEEEEECCCCCCCEEEEE
T ss_conf 489988999748855421587068899995898998679999
No 222
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, protein- carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=85.41 E-value=1.2 Score=20.12 Aligned_cols=14 Identities=7% Similarity=-0.057 Sum_probs=5.3
Q ss_pred EEEEECCCCEEEEE
Q ss_conf 99993788588985
Q T0558 166 VREIAPNGQLLNSV 179 (294)
Q Consensus 166 i~~~d~~g~~~~~~ 179 (294)
+.+++..+..+|..
T Consensus 73 Lvl~~~~g~~vW~S 86 (119)
T 1b2p_A 73 LVVITNENVTVWQS 86 (119)
T ss_dssp EEEECTTCCEEEEC
T ss_pred EEEECCCCCEEEEC
T ss_conf 99997799289975
No 223
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1
Probab=83.51 E-value=1.5 Score=19.56 Aligned_cols=74 Identities=11% Similarity=0.151 Sum_probs=40.1
Q ss_pred EEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEEEECCEEEEEECCCCCEEEEECCCCCCEEEEEECCCC
Q ss_conf 99747986999988788299999449987311647907983998418828997526770367723777631487873787
Q T0558 27 VGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDG 106 (294)
Q Consensus 27 ~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~dg 106 (294)
++=-.|+.+.++|. +..+|.-... +.....+.+.+||+. .+.+..+..+|+...........+...++|
T Consensus 30 l~~q~DGnLvl~~~--~~~vWssnt~-~~~~~~l~l~~~GnL--------vl~d~~g~~vW~s~~~~~~~~~~~~l~~~G 98 (236)
T 1dlp_A 30 FTMQSDCNLVLFDS--DVRVWASNTA-GATGCRAVLQSDGLL--------VILTAQNTIRWSSGTKGSIGNYVLVLQPDR 98 (236)
T ss_dssp EEECTTSCEEEEES--SSEEECCCCC-SCSCCBCCBCSSSCB--------CCBCTTTCCSCCCCCCCCSSCCEEEECSSS
T ss_pred EEECCCCCEEEEEC--CEEEEECCCC-CCCCCEEEEECCCCE--------EEEECCCEEEEECCCCCCCCCEEEEECCCC
T ss_conf 99879984899869--9769969998-999708999579989--------998246503994355588861589984899
Q ss_pred CEEEE
Q ss_conf 58999
Q T0558 107 NALVA 111 (294)
Q Consensus 107 ~~l~~ 111 (294)
+.++.
T Consensus 99 nlvl~ 103 (236)
T 1dlp_A 99 TVTIY 103 (236)
T ss_dssp CEEEE
T ss_pred CEEEE
T ss_conf 88982
No 224
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=82.30 E-value=1.6 Score=19.23 Aligned_cols=17 Identities=6% Similarity=-0.099 Sum_probs=6.8
Q ss_pred CCEEEEEECCCCEEEEE
Q ss_conf 98899993788588985
Q T0558 163 TSEVREIAPNGQLLNSV 179 (294)
Q Consensus 163 d~~i~~~d~~g~~~~~~ 179 (294)
||.+.+++..+..+|+.
T Consensus 60 dGnLvl~~~~~~~iWss 76 (115)
T 2dpf_A 60 DGNLVIYDHNNNDVWGS 76 (115)
T ss_dssp TSCEEEECTTCCEEEEC
T ss_pred CCCEEEECCCCCEEEEC
T ss_conf 66779974885579977
No 225
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=81.16 E-value=1.8 Score=18.95 Aligned_cols=224 Identities=14% Similarity=0.137 Sum_probs=97.2
Q ss_pred CCCCEEEEECC----CCEEEEEECCCCEEEEEEE-CCC-----CCCCCEEEEEC-CCCEEEEEC--------CEEEEEEC
Q ss_conf 88858999747----9869999887882999994-499-----87311647907-983998418--------82899752
Q T0558 21 SPQHLLVGGSG----WNKIAIINKDTKEIVWEYP-LEK-----GWECNSVAATK-AGEILFSYS--------KGAKMITR 81 (294)
Q Consensus 21 ~~~~~l~~gs~----~~~i~~~d~~tg~~~w~~~-~~~-----~~~~~~~~~~p-dG~~l~s~~--------~~v~~~~~ 81 (294)
..+++++.|.. .+....++.......|... ... ....+.+.... ++.+++.+. .+++++|.
T Consensus 396 ~~~~I~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~P~~R~~Ht~t~l~~~~~l~vfGG~~s~~~~lnDvw~yD~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred CCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEC
T ss_conf 38838998188899887536986566765202335268989976575067998659999998776778986260899999
Q ss_pred CCCCEEEEECCCCC--CEEEEEECCCCCEEEEEEC--CCCEEEEECCCCCEEEEEECCCCCC-CCCCCCCEEEECC--CC
Q ss_conf 67703677237776--3148787378758999705--8979999856895889997067767-7667400899969--98
Q T0558 82 DGRELWNIAAPAGC--EMQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFETGIE-RPHAQFRQINKNK--KG 154 (294)
Q Consensus 82 ~~~~~~~~~~~~~~--~v~~~~~~~dg~~l~~~s~--~~~~~~~~~~~G~~~~~~~~~~~~~-~~~~~~~~~~~s~--dG 154 (294)
... .|+.....+. .-+++....++..++.++. +....+++..++ .|+........ .....-..+...+ ++
T Consensus 476 ~t~-~W~~~~~lP~pR~~Hsav~l~~~~v~VfGG~~~~~~~~~~d~~~~--~W~~v~~~~~~~~~~~~~s~~~~~~~~~~ 552 (695)
T 2zwa_A 476 KTR-EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTT-EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred CCC-EEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEECCCC--EEEECCCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 999-599798988876675699976986999567779996899967888--17863678989987765048987202499
Q ss_pred CEEEEEECC------CEEEEEE--CC-CCEEEEE--ECCCEE-----EEEEEECCCCEEEECCCC--------CEEEEEE
Q ss_conf 999997469------8899993--78-8588985--169734-----898873489689973589--------8799998
Q T0558 155 NYLVPLFAT------SEVREIA--PN-GQLLNSV--KLSGTP-----FSSAFLDNGDCLVACGDA--------HCFVQLN 210 (294)
Q Consensus 155 ~~i~~g~~d------~~i~~~d--~~-g~~~~~~--~~~~~~-----~~~~~~~~g~~~v~~~~~--------~~i~~~d 210 (294)
.+++.|..+ ..+.+|+ .. ....|.. .....+ .++....++.+++.++.+ ..+..+|
T Consensus 553 ~ivi~GG~~~~~~~~d~~~i~~~d~~~~t~~~~~~~~~~~~p~~R~ghta~~v~~~~l~V~GG~~~~~~~~~~~~i~~lD 632 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCEEEEEE
T ss_conf 89999123799860575799987679870346845778999887777389998299999994787899866667699998
Q ss_pred CCCCEEEEEECCCCC--CCEEECCCCC-EEECCCCCEEEEE
Q ss_conf 789859998448876--4114113453-4893899899980
Q T0558 211 LESNRIVRRVNANDI--EGVQLFFVAQ-LFPLQNGGLYICN 248 (294)
Q Consensus 211 ~~~g~~~~~~~~~~~--~~~~~~~~~~-~~~~~~G~i~i~~ 248 (294)
..+.+.. .+..... ........+. .....+|.++|.+
T Consensus 633 ~~t~tw~-~v~~~~~~~~~~p~~~~GHsav~~~~g~IlI~G 672 (695)
T 2zwa_A 633 PLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIG 672 (695)
T ss_dssp TTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEEC
T ss_pred CCCCEEE-EECCCCCCCCCCCCCCCCEEEEEECCCEEEEEC
T ss_conf 9999799-935777877889863331589997799899988
No 226
>3h6j_A Neuraminidase, sialidase; six-bladed beta-propeller, cell WALL, glycosidase, hydrolase, peptidoglycan-anchor, secreted; 1.60A {Pseudomonas aeruginosa} PDB: 2w38_A
Probab=79.76 E-value=1.9 Score=18.64 Aligned_cols=159 Identities=11% Similarity=0.033 Sum_probs=71.7
Q ss_pred CCCCCCCCEEEEEC--------CCCEEEEEECCCCEEEEEEEC---CC-C--CCCCEEEEECCCCEEEEE----CCEEEE
Q ss_conf 01478885899974--------798699998878829999944---99-8--731164790798399841----882899
Q T0558 17 AQGSSPQHLLVGGS--------GWNKIAIINKDTKEIVWEYPL---EK-G--WECNSVAATKAGEILFSY----SKGAKM 78 (294)
Q Consensus 17 ~~~s~~~~~l~~gs--------~~~~i~~~d~~tg~~~w~~~~---~~-~--~~~~~~~~~pdG~~l~s~----~~~v~~ 78 (294)
+.-.+++.++++.. .+..|..-.. .|+ -|+.+. .+ . ..-..+...|||+++..+ ++..++
T Consensus 27 ~~~~~dG~l~~v~~~~~~~~g~~~~~v~~S~d-~G~-TWs~~~~v~~~~~~~~~~~~~~~~~~G~ill~~~~~~~g~~~v 104 (438)
T 3h6j_A 27 MDILSDGSLYLIYRRATEHVGGSDGRVVFSKL-EGG-IWSAPTIVAQAGGQDFRDVAGGTMPSGRIVAASTVYETGEVKV 104 (438)
T ss_dssp EEECTTSCEEEEEEEESCCSTTSCCEEEEEEE-ETT-EECCCEEEECCTTCCEEEEEEEECTTSCEEEEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEECCCCCCCCCCEEEEEEEC-CCC-CCCCCEECCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEE
T ss_conf 68849998899995646778986649999918-999-8657878877788546763267758986899966654782799
Q ss_pred E-ECCCCCEEEEECC--CCC----CEEEEEECCCCCEEEEEEC--C---CCEEEEECCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 7-5267703677237--776----3148787378758999705--8---9799998568958899970677677667400
Q T0558 79 I-TRDGRELWNIAAP--AGC----EMQTARILPDGNALVAWCG--H---PSTILEVNMKGEVLSKTEFETGIERPHAQFR 146 (294)
Q Consensus 79 ~-~~~~~~~~~~~~~--~~~----~v~~~~~~~dg~~l~~~s~--~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 146 (294)
| ..+.+.-|..... ... ......+..+|.+++.... + ...+++....|+...+...... ......-.
T Consensus 105 y~S~D~G~TWs~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~S~D~G~TWs~~~~i~~-~~~~~~e~ 183 (438)
T 3h6j_A 105 YVSDDSGVTWVHKFTLARGGADYNFAHGKSFQVGARYVIPLYAATGVNYELKWLESSDGGETWGEGSTIYS-GNTPYNET 183 (438)
T ss_dssp EEESSTTSSCEEEEEECCTTSSEEEECSBCEEETTEEEEEEEEEETTEEEEEEEEESSSSSSCEEEEEEEE-ESSCEEEE
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCEEECCCCCC-CCCCCCCE
T ss_conf 99889997010430546887643456671586089889998515898872399999689971665432468-87675640
Q ss_pred EEEECCCCCEEEEEECC------CEEEEEECCCCEEEEE
Q ss_conf 89996998999997469------8899993788588985
Q T0558 147 QINKNKKGNYLVPLFAT------SEVREIAPNGQLLNSV 179 (294)
Q Consensus 147 ~~~~s~dG~~i~~g~~d------~~i~~~d~~g~~~~~~ 179 (294)
++..++||++++....+ +.+++....|. .|+.
T Consensus 184 sv~~l~DG~lla~~R~~~g~~~~~~~~vs~d~G~-TWs~ 221 (438)
T 3h6j_A 184 SYLPVGDGVILAVARVGSGAGGALRQFISLDDGG-TWTD 221 (438)
T ss_dssp EEEEEETTEEEEEEEETTSTTSCEEEEEESSTTS-SCEE
T ss_pred EEEECCCCEEEEEEECCCCCCCCEEEEEEECCCC-CCCC
T ss_conf 1798299749999964889887505999952266-6423
No 227
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=79.41 E-value=2 Score=18.56 Aligned_cols=12 Identities=8% Similarity=0.044 Sum_probs=5.8
Q ss_pred EEEEEECCCCEE
Q ss_conf 799998789859
Q T0558 205 CFVQLNLESNRI 216 (294)
Q Consensus 205 ~i~~~d~~~g~~ 216 (294)
.+.+++..++..
T Consensus 343 ~l~v~~~~~~~~ 354 (695)
T 2bkl_A 343 EVRVATLKGKPV 354 (695)
T ss_dssp EEEEEETTCCEE
T ss_pred EEEEEECCCCCC
T ss_conf 499985699953
No 228
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, daffodil, sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=78.72 E-value=2.1 Score=18.42 Aligned_cols=11 Identities=9% Similarity=0.169 Sum_probs=4.0
Q ss_pred EEECCCCEEEE
Q ss_conf 99378858898
Q T0558 168 EIAPNGQLLNS 178 (294)
Q Consensus 168 ~~d~~g~~~~~ 178 (294)
+.|..+..+|+
T Consensus 64 l~d~~~~~vW~ 74 (109)
T 3dzw_A 64 VYSPRNNPIWA 74 (109)
T ss_dssp EECTTSCEEEE
T ss_pred EEECCCCEEEE
T ss_conf 99158827985
No 229
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=77.77 E-value=2.2 Score=18.22 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=48.4
Q ss_pred CCCEEEEE-CCCCEEEEEECCCCEEEEEEECC--CCCCCCEEEEECCCCEEEEEC------------CEEEEEECCCCCE
Q ss_conf 88589997-47986999988788299999449--987311647907983998418------------8289975267703
Q T0558 22 PQHLLVGG-SGWNKIAIINKDTKEIVWEYPLE--KGWECNSVAATKAGEILFSYS------------KGAKMITRDGREL 86 (294)
Q Consensus 22 ~~~~l~~g-s~~~~i~~~d~~tg~~~w~~~~~--~~~~~~~~~~~pdG~~l~s~~------------~~v~~~~~~~~~~ 86 (294)
.+++++.| +..+.++++|.++.+..|+.... ........+..-++++++.+. ..+..+|.... .
T Consensus 19 ~~~iyvfGG~~~~~~~~~dl~~~~~~W~~l~~~p~~~R~~~~~~~~~~~iyvfGG~~~~~~~~~~~~~dv~~yd~~~~-~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN-S 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT-E
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEECCCC-C
T ss_conf 999999906879968999796898908999999998754329999999999994805765666530576789852678-3
Q ss_pred EEEECCC--CCCEEEEEECCCCCEEEEEE
Q ss_conf 6772377--76314878737875899970
Q T0558 87 WNIAAPA--GCEMQTARILPDGNALVAWC 113 (294)
Q Consensus 87 ~~~~~~~--~~~v~~~~~~~dg~~l~~~s 113 (294)
|...... ...........+++.++++.
T Consensus 98 W~~~~~~~~~~r~~ha~~~~~~~iyv~GG 126 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFVHNGKAYVTGG 126 (357)
T ss_dssp EEECSCCCSSCCSSEEEEEETTEEEEEEC
T ss_pred EEECCCCCCCCCCCEEEEEECCEEEEECC
T ss_conf 43126878631120258964999999878
No 230
>2wg3_C Hedgehog-interacting protein; cytoplasm, lipoprotein, development, polymorphism, membrane, secreted, protease, palmitate, hydrolase; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=76.13 E-value=2.4 Score=17.91 Aligned_cols=97 Identities=16% Similarity=0.063 Sum_probs=46.3
Q ss_pred CCCCCCCC-EEEEECCCCEEEEEECCCCEEEE----EEE------C--CCCCCCCEEEEECC----CCEEEEEC------
Q ss_conf 01478885-89997479869999887882999----994------4--99873116479079----83998418------
Q T0558 17 AQGSSPQH-LLVGGSGWNKIAIINKDTKEIVW----EYP------L--EKGWECNSVAATKA----GEILFSYS------ 73 (294)
Q Consensus 17 ~~~s~~~~-~l~~gs~~~~i~~~d~~tg~~~w----~~~------~--~~~~~~~~~~~~pd----G~~l~s~~------ 73 (294)
....+++. .|++....++|++++.+. +..- ... . ........++|+|| |.+++++.
T Consensus 19 ~~~~pDGs~Rl~V~er~G~I~~~~~~g-~~~~~~~~di~~~v~~~~~~~~e~GLLgiafhPdf~~ng~vYv~Yt~~~~~~ 97 (463)
T 2wg3_C 19 ALHSGDGSQRLFILEKEGYVKILTPEG-EIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERW 97 (463)
T ss_dssp EECCSSSSCCEEEEETTTEEEEECTTS-CBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSS
T ss_pred EEECCCCCCEEEEEECCCEEEEEECCC-CEEECEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCC
T ss_conf 998879983899996998799995899-7860100378410015776689776345998999774998999997688877
Q ss_pred ------C--EEEEEEC--C--------CC-CEEEEE-CCCCCCEEEEEECCCCCEEEEEEC
Q ss_conf ------8--2899752--6--------77-036772-377763148787378758999705
Q T0558 74 ------K--GAKMITR--D--------GR-ELWNIA-APAGCEMQTARILPDGNALVAWCG 114 (294)
Q Consensus 74 ------~--~v~~~~~--~--------~~-~~~~~~-~~~~~~v~~~~~~~dg~~l~~~s~ 114 (294)
. .+..+.. . .+ .++... .........+.|.|||.++++...
T Consensus 98 ~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~vll~~~~~~~~H~gg~i~fgpDG~LYi~~Gd 158 (463)
T 2wg3_C 98 AIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEECC
T ss_conf 6676542468999998258866467654179995789988856630477489977999767
No 231
>1h6l_A 3-phytase; hydrolase, phosphatase, propeller, phosphate; 1.8A {Bacillus amyloliquefaciens} SCOP: b.68.3.1 PDB: 1cvm_A 1qlg_A 2poo_A 1poo_A
Probab=75.98 E-value=2.5 Score=17.89 Aligned_cols=189 Identities=10% Similarity=0.082 Sum_probs=96.0
Q ss_pred CCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEE------CCCC-EEEEEC-----CEEEEEECCCCCEEEE
Q ss_conf 885899974798699998878829999944998731164790------7983-998418-----8289975267703677
Q T0558 22 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAAT------KAGE-ILFSYS-----KGAKMITRDGRELWNI 89 (294)
Q Consensus 22 ~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~------pdG~-~l~s~~-----~~v~~~~~~~~~~~~~ 89 (294)
...+++.-.+.+-|+++|++ |+.+..++.+. ++.+.+. .++. +++.++ ..++.+..++......
T Consensus 39 ~~SlIigTdK~~Gl~vYdL~-G~~l~~~~~Gr---~NNVDlr~~~~l~~~~~dl~v~snR~~~~~~~~~~~~~~~~~~~~ 114 (353)
T 1h6l_A 39 QNSKLITTNKKSGLAVYSLE-GKMLHSYHTGK---LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (353)
T ss_dssp GGCEEEEEETTSCCEEEETT-CCEEEECCSSC---EEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEE
T ss_pred CCCEEEEECCCCCEEEECCC-CCEEEECCCCC---CCCCCEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCC
T ss_conf 73689998786886998789-87888636787---453212125435787068999966778827899972277533234
Q ss_pred EC----------CCCCCEEEEEECCC-CCEEEEEEC-CCCEEEE---ECCCC----CEEEEEECCCCCCCCCCCCCEEEE
Q ss_conf 23----------77763148787378-758999705-8979999---85689----588999706776776674008999
Q T0558 90 AA----------PAGCEMQTARILPD-GNALVAWCG-HPSTILE---VNMKG----EVLSKTEFETGIERPHAQFRQINK 150 (294)
Q Consensus 90 ~~----------~~~~~v~~~~~~~d-g~~l~~~s~-~~~~~~~---~~~~G----~~~~~~~~~~~~~~~~~~~~~~~~ 150 (294)
.. ....+..++.-.+. +...+.... .+.+..| ...++ +.++++....+ .-.+.+
T Consensus 115 ~~~~~~~~~~~~~~~vYGlc~y~~~~~g~~ya~v~~k~g~v~q~~L~~~~~~~v~~~~vr~f~~~~e-------~EGCVv 187 (353)
T 1h6l_A 115 SITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQ-------TEGMAA 187 (353)
T ss_dssp ECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSC-------EEEEEE
T ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEECCCCCCCC-------CCEEEE
T ss_conf 4566654345566775799978627888167898405750899999957987267787314688987-------435998
Q ss_pred CCCCCEEEEEECCCEEEEEECC--C---CE-EEEEE---CCCEEEEEEEEC--CCC-EEEECC-CCCEEEEEECCCC-EE
Q ss_conf 6998999997469889999378--8---58-89851---697348988734--896-899735-8987999987898-59
Q T0558 151 NKKGNYLVPLFATSEVREIAPN--G---QL-LNSVK---LSGTPFSSAFLD--NGD-CLVACG-DAHCFVQLNLESN-RI 216 (294)
Q Consensus 151 s~dG~~i~~g~~d~~i~~~d~~--g---~~-~~~~~---~~~~~~~~~~~~--~g~-~~v~~~-~~~~i~~~d~~~g-~~ 216 (294)
....+.|+.+..+..+..++.. . .. +.... ....+..++... ++. ++++++ .++.+.++|.++. +.
T Consensus 188 Dde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~~~~l~~D~EGlaiy~~~~~~gyli~SsQG~n~f~vydr~~~~~~ 267 (353)
T 1h6l_A 188 DDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKY 267 (353)
T ss_dssp ETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCE
T ss_pred CCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC
T ss_conf 27789099971767459987376778762477612577633582113578756897599997058873899846778663
Q ss_pred EEEEC
Q ss_conf 99844
Q T0558 217 VRRVN 221 (294)
Q Consensus 217 ~~~~~ 221 (294)
+.++.
T Consensus 268 ~g~F~ 272 (353)
T 1h6l_A 268 VADFQ 272 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
T ss_conf 05899
No 232
>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=68.71 E-value=3.5 Score=16.73 Aligned_cols=11 Identities=18% Similarity=0.178 Sum_probs=3.9
Q ss_pred EEECCCCEEEE
Q ss_conf 99378858898
Q T0558 168 EIAPNGQLLNS 178 (294)
Q Consensus 168 ~~d~~g~~~~~ 178 (294)
+++..+..+|.
T Consensus 65 l~~~~g~~vW~ 75 (109)
T 1kj1_A 65 VYDAEGRSLWA 75 (109)
T ss_dssp EECSSSCEEEE
T ss_pred EEECCCCEEEE
T ss_conf 99589979997
No 233
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomics initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=62.22 E-value=4.6 Score=15.88 Aligned_cols=71 Identities=8% Similarity=0.137 Sum_probs=39.0
Q ss_pred CEEEEEECCCCEEEEEECCCCCCCEEECCCCC---EEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCEE
Q ss_conf 87999987898599984488764114113453---489389989998046771430247775699990899899
Q T0558 204 HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ---LFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVV 274 (294)
Q Consensus 204 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~v 274 (294)
..+.++|..+|+-+.++-.....++.....++ ...-+...+.+..|...+......+.+.++-+|++.+++
T Consensus 18 E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~lNGAAAr~~~~GD~vII~sya~~~~~e~~~~~P~vv~vd~~N~i~ 91 (96)
T 1vc3_B 18 EQVDIYDITNGARLTTYALPGERGSGVIGINGAAAHLVKPGDLVILVAYGVFDEEEARNLKPTVVLVDERNRIL 91 (96)
T ss_dssp CEEEEEETTTCCEEEEECEEECTTTTCEEEEGGGGGTCCTTCEEEEEEEEEECHHHHTTCCCEEEEECTTCCEE
T ss_pred CEEEEEECCCCCEEEEEEEECCCCCCEEEECCHHHEECCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCCEE
T ss_conf 88999999899489879996367668798558564235999999999877479889726877799999999899
No 234
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydrolase; 1.80A {Novosphingobium capsulatum}
Probab=62.05 E-value=4.7 Score=15.86 Aligned_cols=50 Identities=14% Similarity=0.211 Sum_probs=21.8
Q ss_pred CCCCCCEEEEEC-----CCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCEEE
Q ss_conf 478885899974-----7986999988788299999449987311647907983998
Q T0558 19 GSSPQHLLVGGS-----GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF 70 (294)
Q Consensus 19 ~s~~~~~l~~gs-----~~~~i~~~d~~tg~~~w~~~~~~~~~~~~~~~~pdG~~l~ 70 (294)
.|+++++|+-+. ..-+++++|.++|+.+-.- +. ......+.+.+|...++
T Consensus 170 ~SPDGk~lAy~~d~~G~E~~~l~i~dl~tg~~l~~~-i~-~~~~~~~~w~~d~~~~y 224 (741)
T 1yr2_A 170 ASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LK-WVKFSGLAWLGNDALLY 224 (741)
T ss_dssp ECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EE-EEESCCCEESTTSEEEE
T ss_pred ECCCCCEEEEEEECCCCEEEEEEEEECCCCCEECCC-CC-CCCCCCEEEECCCCEEE
T ss_conf 999999899998579863579999861467320232-22-44346402504783488
No 235
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing, lyase; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 1aw8_B 1aw8_E 1pyu_A 1aw8_A
Probab=57.21 E-value=5.6 Score=15.29 Aligned_cols=72 Identities=8% Similarity=0.123 Sum_probs=45.1
Q ss_pred CCCEEEEEECCCCEEEEEECCCCCCCEEECCCCC---EEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCE
Q ss_conf 8987999987898599984488764114113453---48938998999804677143024777569999089989
Q T0558 202 DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ---LFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKV 273 (294)
Q Consensus 202 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~ 273 (294)
....+.++|..+|+-+.++-.....++.....++ ....+...++|..|...+........+.++-+|++.++
T Consensus 57 ~~E~V~V~Nv~NG~Rf~TYvI~g~~gSg~I~lNGAAAr~~~~GD~vII~sYa~~~~~e~~~~~P~vv~vde~N~i 131 (143)
T 1pqh_A 57 ENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEM 131 (143)
T ss_dssp TTCEEEEEETTTCCEEEEEEEEECTTCCCEECCGGGGGTCCTTCEEEEEEEEEEEHHHHTTCCCEEEEEETTTEE
T ss_pred CCCEEEEEECCCCCEEEEEEEECCCCCCEEEECCHHHHCCCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCCE
T ss_conf 898899999999977999999635888758746888854799999999988658966852787669999999988
No 236
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=56.28 E-value=4.2 Score=16.17 Aligned_cols=72 Identities=8% Similarity=0.132 Sum_probs=37.6
Q ss_pred CCEEEEEECCCCEEEEEECCCCCCCEEECCCCC---EEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCEE
Q ss_conf 987999987898599984488764114113453---489389989998046771430247775699990899899
Q T0558 203 AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ---LFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVV 274 (294)
Q Consensus 203 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~v 274 (294)
...+.++|..+|+-+.++-.....++.....++ ....+...+.+..|...+......+.+.++-+|++.+++
T Consensus 41 ~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~lNGaAAr~~~~GD~vII~sya~~~~~e~~~~~P~vv~vd~~N~i~ 115 (139)
T 2c45_A 41 GEQVTIVDIDNGARLVTYAITGERGSGVIGINGAAAHLVHPGDLVILIAYATMDDARARTYQPRIVFVDAYNKPI 115 (139)
T ss_dssp SCCEEEEETTTCCEEEECEEEECTTTTCEEEESSTTTTSCTTCEEEEEECCEEEHHHHHSCCCEEEECCTTCC--
T ss_pred CCEEEEEECCCCCEEEEEEEECCCCCCEEEECCHHHEECCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCEE
T ss_conf 989999986799488878986578974487548344034889999999805369899716877799989999887
No 237
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=53.97 E-value=6.3 Score=14.92 Aligned_cols=130 Identities=8% Similarity=-0.030 Sum_probs=52.2
Q ss_pred CCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCC-------CCCCCEEEEECCC-CEEEE--EC-----CEEEEEECCC
Q ss_conf 47888589997479869999887882999994499-------8731164790798-39984--18-----8289975267
Q T0558 19 GSSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-------GWECNSVAATKAG-EILFS--YS-----KGAKMITRDG 83 (294)
Q Consensus 19 ~s~~~~~l~~gs~~~~i~~~d~~tg~~~w~~~~~~-------~~~~~~~~~~pdG-~~l~s--~~-----~~v~~~~~~~ 83 (294)
++.|. ++..|+..+-|+-.+ .+-.-|+.-++. ...+.+++++|.. ++++. ++ +.-.....++
T Consensus 24 p~~~~-~~y~gt~~GG~~ks~--d~g~~W~~l~d~~~~~~~~~~~v~~ia~dp~np~~vy~gtge~~~~~~~gi~kS~Dg 100 (789)
T 1sqj_A 24 PKTKD-LLYARTDIGGAYRWD--AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDR 100 (789)
T ss_dssp SSSTT-CEEEEESSSCEEEEE--TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESST
T ss_pred CCCCC-EEEEEECCCCEEEEE--CCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECC
T ss_conf 89999-899994868989994--899973789577666776645467999899999989999540148878869999589
Q ss_pred CCEEEEECCC---------CCCEEEEEECCCC-CEEEEEECCCCEEEEECCCCCEEEEEECCC-CCCCCCCCCCEEEECC
Q ss_conf 7036772377---------7631487873787-589997058979999856895889997067-7677667400899969
Q T0558 84 RELWNIAAPA---------GCEMQTARILPDG-NALVAWCGHPSTILEVNMKGEVLSKTEFET-GIERPHAQFRQINKNK 152 (294)
Q Consensus 84 ~~~~~~~~~~---------~~~v~~~~~~~dg-~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~s~ 152 (294)
++-|+..... ...+..+.++|.. +.+++++.+.+++ ...+|-..|+..... ........+..+.+.|
T Consensus 101 G~TW~~~~~~~~~~~~~~g~~~~~~i~v~P~n~~~vy~~~~~~Gl~--kS~DgG~TW~~v~~~~~~~~~~~~~~~i~~dp 178 (789)
T 1sqj_A 101 GQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW--KSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDP 178 (789)
T ss_dssp TSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE--EESSTTSSCEEETTSCCCCSTTTCEEEEEECT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEE--EECCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 9886007788756767667675369998999999899996789999--96789988526647877777886649999935
Q ss_pred C
Q ss_conf 9
Q T0558 153 K 153 (294)
Q Consensus 153 d 153 (294)
.
T Consensus 179 ~ 179 (789)
T 1sqj_A 179 E 179 (789)
T ss_dssp T
T ss_pred C
T ss_conf 8
No 238
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=53.95 E-value=6.3 Score=14.92 Aligned_cols=25 Identities=4% Similarity=-0.154 Sum_probs=14.0
Q ss_pred CCCCCEEEEECCCCEEEEEECCCCE
Q ss_conf 7888589997479869999887882
Q T0558 20 SSPQHLLVGGSGWNKIAIINKDTKE 44 (294)
Q Consensus 20 s~~~~~l~~gs~~~~i~~~d~~tg~ 44 (294)
.++.++|++....++|++++..++.
T Consensus 26 ~pdg~~l~v~e~~G~i~~~~~~~~~ 50 (353)
T 2g8s_A 26 LPDNHGMLITLRGGELRHWQAGKGL 50 (353)
T ss_dssp CSTTCCEEEEETTTEEEEEETTTEE
T ss_pred ECCCCEEEEEECCCEEEEEECCCCC
T ss_conf 3699889999728879999799960
No 239
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=53.50 E-value=6.4 Score=14.87 Aligned_cols=12 Identities=8% Similarity=-0.086 Sum_probs=3.9
Q ss_pred EEEEECCCCEEE
Q ss_conf 999937885889
Q T0558 166 VREIAPNGQLLN 177 (294)
Q Consensus 166 i~~~d~~g~~~~ 177 (294)
+.+++..++.+|
T Consensus 93 lvly~~~~~~~W 104 (112)
T 1xd5_A 93 VVIYDNSNNAIW 104 (112)
T ss_dssp EEEECTTSCEEE
T ss_pred EEEECCCCCEEE
T ss_conf 999989996696
No 240
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=44.23 E-value=8.7 Score=13.88 Aligned_cols=71 Identities=7% Similarity=0.044 Sum_probs=32.2
Q ss_pred CEEEEEECCCCEEEEEECCCCCCC--EEECCCCCEEECCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCEE
Q ss_conf 879999878985999844887641--14113453489389989998046771430247775699990899899
Q T0558 204 HCFVQLNLESNRIVRRVNANDIEG--VQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVV 274 (294)
Q Consensus 204 ~~i~~~d~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~G~i~i~~~~~~~~~~~~~~~~~~~~i~~~G~~v 274 (294)
..+.++|..+|+-+.++-.....+ .++-...-....+...+.+..|...+......+.+.++-+|++.+++
T Consensus 17 E~V~V~Nv~NG~Rf~TYvI~g~~sg~I~lNGaAAr~~~~GD~vII~sya~~~~~e~~~~~P~vv~vd~~N~i~ 89 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTYVILGKKRGEICVNGAAARKVAIGDVVIILAYASMNEDEINAHKPSIVLVDEKNEIL 89 (97)
T ss_dssp CEEEEEETTTCCEEEEECEEECSTTCEEEEGGGGGGCCTTCEEEEEEEEEECHHHHHHCCCEEEEECTTSCEE
T ss_pred CEEEEEECCCCCEEEEEEEECCCCCEEEECCHHHEECCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCCEE
T ss_conf 8899999989958887999527788798688686125999999999816469899825887799999999773
No 241
>2w7q_A Outer-membrane lipoprotein carrier protein; periplasmic chaperone, lipoprotein transport, transport, periplasm, chaperone; 1.88A {Pseudomonas aeruginosa}
Probab=40.49 E-value=9.9 Score=13.49 Aligned_cols=37 Identities=11% Similarity=0.095 Sum_probs=22.7
Q ss_pred CCEEEEEEECCCCCCCCEEEEECCCCEEEEECCEEEEEECCCCCEEEEE
Q ss_conf 8829999944998731164790798399841882899752677036772
Q T0558 42 TKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIA 90 (294)
Q Consensus 42 tg~~~w~~~~~~~~~~~~~~~~pdG~~l~s~~~~v~~~~~~~~~~~~~~ 90 (294)
.+++.|++. .|++..+++.+..+.+|+.+.+++....
T Consensus 64 P~~~rw~y~------------~P~~~~iv~~g~~l~~yd~~~~qv~~~~ 100 (204)
T 2w7q_A 64 PGLFRWHTD------------APNEQLLISNGEKVWLYDPDLEQVTIQK 100 (204)
T ss_dssp TTEEEEEEC------------SSSCEEEEEETTEEEEEETTTTEEEEEC
T ss_pred CCEEEEEEC------------CCCEEEEEECCCEEEEECCCCCCCEECC
T ss_conf 998999983------------8870799984988999864225110013
No 242
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=39.69 E-value=10 Score=13.40 Aligned_cols=19 Identities=16% Similarity=0.088 Sum_probs=7.9
Q ss_pred CCEEEEEECCCCEEEEEEE
Q ss_conf 9869999887882999994
Q T0558 32 WNKIAIINKDTKEIVWEYP 50 (294)
Q Consensus 32 ~~~i~~~d~~tg~~~w~~~ 50 (294)
+|+.+=+|..||+..|+.+
T Consensus 14 ~Gr~YYyN~~T~~s~We~P 32 (75)
T 2jxw_A 14 EGYHYYYDLISGASQWEKP 32 (75)
T ss_dssp TTEEEEEETTTTEEECSCC
T ss_pred CCCEEEEECCCCCEEECCC
T ss_conf 9999989899997666688
No 243
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=39.27 E-value=10 Score=13.36 Aligned_cols=74 Identities=11% Similarity=0.053 Sum_probs=41.3
Q ss_pred CCEEEECCCCC-EEEEEECCCEEEEEECCCCEEEEEE--CCCEEEEEEEECC--CCEEEECC----CCCEEEEEECCCCE
Q ss_conf 00899969989-9999746988999937885889851--6973489887348--96899735----89879999878985
Q T0558 145 FRQINKNKKGN-YLVPLFATSEVREIAPNGQLLNSVK--LSGTPFSSAFLDN--GDCLVACG----DAHCFVQLNLESNR 215 (294)
Q Consensus 145 ~~~~~~s~dG~-~i~~g~~d~~i~~~d~~g~~~~~~~--~~~~~~~~~~~~~--g~~~v~~~----~~~~i~~~d~~~g~ 215 (294)
+....+.-||+ =|+.++ ..+|-.|+.+|+.. +.+..+-..+-|+ |..++.+. ......+.|.++|+
T Consensus 332 l~VaDvDGDGkdDIv~G~-----~~~D~dG~~l~s~~~ghGDa~~v~dldp~~~gl~v~~~~e~~~~~~g~~~~da~tG~ 406 (620)
T 2zuy_A 332 LSVADVDGDGKDEIIYGA-----MAVDHDGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGE 406 (620)
T ss_dssp CEEECCSSSSSCEEEETT-----EEECTTSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCC
T ss_pred EEEECCCCCCCCEEEEEE-----EEECCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCC
T ss_conf 677778999866078987-----678899977640688877535787526899960899951467787643553066885
Q ss_pred EEEEECCC
Q ss_conf 99984488
Q T0558 216 IVRRVNAN 223 (294)
Q Consensus 216 ~~~~~~~~ 223 (294)
++|.....
T Consensus 407 ~lw~~~~~ 414 (620)
T 2zuy_A 407 ILWGVHAG 414 (620)
T ss_dssp EEEEECCS
T ss_pred EEEEECCC
T ss_conf 88634688
No 244
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=39.17 E-value=10 Score=13.35 Aligned_cols=18 Identities=28% Similarity=0.560 Sum_probs=8.8
Q ss_pred CEEEEEECCCCEEEEEEE
Q ss_conf 869999887882999994
Q T0558 33 NKIAIINKDTKEIVWEYP 50 (294)
Q Consensus 33 ~~i~~~d~~tg~~~w~~~ 50 (294)
--|.++|.+||+++.+.|
T Consensus 69 ~vVkVvD~~TgEVIRqIP 86 (117)
T 2hc5_A 69 YYVKVIEDSTNEVIREIP 86 (117)
T ss_dssp EEEEEEETTTTEEEEEEC
T ss_pred EEEEEEECCCCEEEEECC
T ss_conf 999999899980645489
No 245
>3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, hydrolase; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A*
Probab=33.88 E-value=12 Score=12.77 Aligned_cols=26 Identities=19% Similarity=0.496 Sum_probs=18.7
Q ss_pred EEEEEECCCCEEEEEEECCCCCCCCE
Q ss_conf 69999887882999994499873116
Q T0558 34 KIAIINKDTKEIVWEYPLEKGWECNS 59 (294)
Q Consensus 34 ~i~~~d~~tg~~~w~~~~~~~~~~~~ 59 (294)
.-.++|.+||+++++...+....+.+
T Consensus 72 sai~~d~~tG~iLy~Kn~d~~~~pAS 97 (453)
T 3hun_A 72 TSAVNVSQTGQLLYQYNIDTKWNPAS 97 (453)
T ss_dssp SEEEEEETTSBEEEEESTTCCBCCGG
T ss_pred EEEEEECCCCCCHHEECCCCCCCCHH
T ss_conf 17999999992812258199827789
No 246
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=33.82 E-value=12 Score=12.83 Aligned_cols=19 Identities=37% Similarity=0.422 Sum_probs=9.0
Q ss_pred CCEEEEEECCCCEEEEEEE
Q ss_conf 9869999887882999994
Q T0558 32 WNKIAIINKDTKEIVWEYP 50 (294)
Q Consensus 32 ~~~i~~~d~~tg~~~w~~~ 50 (294)
+|+++=+|..|++-.|+.|
T Consensus 15 ~Gr~YY~N~~T~~s~We~P 33 (37)
T 1e0l_A 15 DGKTYYYNNRTLESTWEKP 33 (37)
T ss_dssp TSCEEEEETTTTEEESSCC
T ss_pred CCCEEEEECCCCCEECCCC
T ss_conf 9998878799898766896
No 247
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=31.37 E-value=14 Score=12.49 Aligned_cols=191 Identities=8% Similarity=-0.041 Sum_probs=76.8
Q ss_pred CCCCEEEEECCCCEEEEEECCCCEEEE-------EEECCCCCCCCE--EEEECCCCEEEEECCEEEEEECCC--CCEEE-
Q ss_conf 888589997479869999887882999-------994499873116--479079839984188289975267--70367-
Q T0558 21 SPQHLLVGGSGWNKIAIINKDTKEIVW-------EYPLEKGWECNS--VAATKAGEILFSYSKGAKMITRDG--RELWN- 88 (294)
Q Consensus 21 ~~~~~l~~gs~~~~i~~~d~~tg~~~w-------~~~~~~~~~~~~--~~~~pdG~~l~s~~~~v~~~~~~~--~~~~~- 88 (294)
+.+..++.-|.+|.|.-....+-+..- ...+..++.+.. .+-+.|--.+++..+.++...... ..-|+
T Consensus 1 ~eEdv~v~ls~~GyiKR~~~~~~~~~~rg~~g~~~~~~k~~D~v~~~~~~~t~d~ll~fT~~G~~~~i~v~~ip~~~~~~ 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCCEEEEEECCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECHHHEEEEEHHCCCCCCCCC
T ss_conf 97669999958987898077996421468888434513789678999997189769999730208999835073444456
Q ss_pred -------EECC-CCCCEE-EEEEC--CCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEE
Q ss_conf -------7237-776314-87873--787589997058979999856895889997067767766740089996998999
Q T0558 89 -------IAAP-AGCEMQ-TARIL--PDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYL 157 (294)
Q Consensus 89 -------~~~~-~~~~v~-~~~~~--~dg~~l~~~s~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i 157 (294)
...- ....+. .+.+. .+..+++..+.++.+.......-..........-.....+.+-.+....+...+
T Consensus 81 ~G~~i~~~~~~~~~e~i~~~~~~~~~~~~~~l~~~T~~G~iKr~~l~~~~~~~~~g~~ai~Lk~~Delv~v~~~~~~~~i 160 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEV 160 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEE
T ss_pred CCCCHHEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEEECHHHHCCCCCCCCEEEECCCCCEEEEEEEECCCCEE
T ss_conf 88073123068778559999713445677726999768727750445602114468078622689618999991799629
Q ss_pred EEEECCCEEEEEECC-----CCE---EE--EEECCCEEEEEEEECCCCEEEECCCCCEEEEEEC
Q ss_conf 997469889999378-----858---89--8516973489887348968997358987999987
Q T0558 158 VPLFATSEVREIAPN-----GQL---LN--SVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNL 211 (294)
Q Consensus 158 ~~g~~d~~i~~~d~~-----g~~---~~--~~~~~~~~~~~~~~~~g~~~v~~~~~~~i~~~d~ 211 (294)
+..+.+|.+..+... |.. +. ....++.+.++...++...++.-+..+.......
T Consensus 161 ~l~T~~G~~lrf~~~~v~~~gr~a~GVk~ikL~~~d~vv~~~~~~~~~~~l~vt~~G~~Kr~~~ 224 (307)
T 1zi0_A 161 MLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred EEEECCCEEEEECCCCEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEHHHHCEEECH
T ss_conf 9984287799982511220588764168689179979999861379801522021422444111
No 248
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=29.78 E-value=14 Score=12.30 Aligned_cols=20 Identities=15% Similarity=0.230 Sum_probs=11.2
Q ss_pred CCCEEEEEECCCEEEEEECC
Q ss_conf 98999997469889999378
Q T0558 153 KGNYLVPLFATSEVREIAPN 172 (294)
Q Consensus 153 dG~~i~~g~~d~~i~~~d~~ 172 (294)
+.+++++-+.|.++++||..
T Consensus 230 ~~~~lftL~~d~~LRiWnl~ 249 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLT 249 (729)
T ss_dssp TTTEEEEEETTCEEEEEETT
T ss_pred CCEEEEEEECCCEEEEEECC
T ss_conf 66089999637627887747
No 249
>3hbr_A OXA-48; class D beta-lactamase, antibiotic, dimer, hydrolase; HET: KCX; 1.90A {Klebsiella pneumoniae}
Probab=28.77 E-value=15 Score=12.18 Aligned_cols=46 Identities=7% Similarity=0.115 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEEE---------CCCCEEEEEECCCCEEE
Q ss_conf 90345568887663200147888589997---------47986999988788299
Q T0558 1 MKNFILLVALFLVAPFAQGSSPQHLLVGG---------SGWNKIAIINKDTKEIV 46 (294)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g---------s~~~~i~~~d~~tg~~~ 46 (294)
||-+.|..++++.+.++.++..+..--.- .-++.+.++|..+|+..
T Consensus 1 ~~~l~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~f~~~~~~G~~v~~d~~~g~~~ 55 (265)
T 3hbr_A 1 MRVLALSAVFLVASIIGMPAVAKEWQENKSWNAHFTEHKSQGVVVLWNENKQQGF 55 (265)
T ss_dssp ------------------------CEECGGGHHHHHTTTCCEEEEEEETTTTEEE
T ss_pred CEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEE
T ss_conf 9026999999999984672100234556779976331387469999978999577
No 250
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1
Probab=25.72 E-value=17 Score=11.81 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=18.2
Q ss_pred EEEEEECCCCCCCCEEEEECCCCEEEEECCEEEEEECCC
Q ss_conf 999994499873116479079839984188289975267
Q T0558 45 IVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDG 83 (294)
Q Consensus 45 ~~w~~~~~~~~~~~~~~~~pdG~~l~s~~~~v~~~~~~~ 83 (294)
.+++.++. .+..++|+.|. ..+..+..+..++...
T Consensus 81 ~~~~~~lp---~v~~vafs~d~-l~v~~~~~l~~~~v~s 115 (388)
T 1xip_A 81 FKWEKEIP---DVIFVCFHGDQ-VLVSTRNALYSLDLEE 115 (388)
T ss_dssp CSEEEECT---TEEEEEEETTE-EEEEESSEEEEEESSS
T ss_pred EEECCCCC---CEEEEEECCCE-EEEEECCCEEEEEEHH
T ss_conf 23116899---86899961896-8999679889998435
No 251
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=25.29 E-value=17 Score=11.76 Aligned_cols=12 Identities=0% Similarity=0.304 Sum_probs=4.1
Q ss_pred EEEECCCCEEEE
Q ss_conf 999878985999
Q T0558 207 VQLNLESNRIVR 218 (294)
Q Consensus 207 ~~~d~~~g~~~~ 218 (294)
.++|..+++++|
T Consensus 81 Rl~Dl~~~~vvw 92 (152)
T 1mke_A 81 RIFDIKDGKLLW 92 (152)
T ss_dssp EEECSSSCSEEE
T ss_pred EEEECCCCEEEE
T ss_conf 999737985899
No 252
>3dw0_A Class A carbapenemase KPC-2; beta-lactamase, antibiotic resistance, hydrolase; 1.60A {Escherichia coli}
Probab=21.50 E-value=20 Score=11.25 Aligned_cols=15 Identities=13% Similarity=0.341 Sum_probs=12.1
Q ss_pred EEEEECCCCEEEEEEE
Q ss_conf 9999887882999994
Q T0558 35 IAIINKDTKEIVWEYP 50 (294)
Q Consensus 35 i~~~d~~tg~~~w~~~ 50 (294)
|+++|.+||+.+ .+.
T Consensus 46 v~v~Dl~tG~~~-~~n 60 (294)
T 3dw0_A 46 VYAMDTGSGATV-SYR 60 (294)
T ss_dssp EEEEETTTCCEE-EES
T ss_pred EEEEECCCCCEE-EEC
T ss_conf 999989999885-688
No 253
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.27 E-value=20 Score=11.22 Aligned_cols=35 Identities=9% Similarity=-0.070 Sum_probs=15.5
Q ss_pred EEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 98873489689973589879999878985999844
Q T0558 187 SSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 221 (294)
Q Consensus 187 ~~~~~~~g~~~v~~~~~~~i~~~d~~~g~~~~~~~ 221 (294)
+....+..........+++++.+|..+++-.|...
T Consensus 13 ~~~p~p~~~W~~~~t~~G~~yyyN~~t~~S~W~~P 47 (73)
T 2dk7_A 13 ATAPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRP 47 (73)
T ss_dssp EEEECSSSSCEEEEESSSCEEEEETTTTEECSSCC
T ss_pred CCCCCCCCCCEEEECCCCCEEEEECCCCCEECCCC
T ss_conf 67889999887888999998877799998746798
No 254
>2bcf_A Probable D-alanyl-D-alanine carboxypeptidase DACB2; penicillin-binding protein, DD-2 carboxypeptidase, directed evolution; 2.30A {Mycobacterium tuberculosis}
Probab=21.13 E-value=20 Score=11.20 Aligned_cols=29 Identities=7% Similarity=-0.027 Sum_probs=20.8
Q ss_pred CCEEEEEECCCCEEEEEEECCCCCCCCEE
Q ss_conf 98699998878829999944998731164
Q T0558 32 WNKIAIINKDTKEIVWEYPLEKGWECNSV 60 (294)
Q Consensus 32 ~~~i~~~d~~tg~~~w~~~~~~~~~~~~~ 60 (294)
-....++|.+||+++++...+....+.++
T Consensus 19 A~saiv~D~~tG~iL~~kN~d~~~~~ASl 47 (276)
T 2bcf_A 19 AQTWIVADLDSGQVLAGRDQNVAHPPAST 47 (276)
T ss_dssp CSEEEEEETTTCEEEEEESTTCCBCCGGG
T ss_pred CEEEEEEECCCCCEEEEECCCCCCCHHHH
T ss_conf 32899999999989001484998071999
No 255
>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}
Probab=20.10 E-value=21 Score=11.05 Aligned_cols=15 Identities=0% Similarity=0.264 Sum_probs=6.6
Q ss_pred EEEEECCCCEEEEEE
Q ss_conf 999987898599984
Q T0558 206 FVQLNLESNRIVRRV 220 (294)
Q Consensus 206 i~~~d~~~g~~~~~~ 220 (294)
+.++|..+++++|..
T Consensus 97 iRl~dl~~~~vvweq 111 (169)
T 2ifs_A 97 LRIFDIKDGKLLWEQ 111 (169)
T ss_dssp EEEEETTTCCCCEEE
T ss_pred EEEEECCCCEEEEEE
T ss_conf 999985888078776
No 256
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=20.05 E-value=21 Score=11.04 Aligned_cols=208 Identities=11% Similarity=0.006 Sum_probs=94.0
Q ss_pred EEEEECCCCEEEEEECCCCEEEEEEECCCC-CCCCEEEEECCCCEEEEEC-------------CEEEEEECCCCCEEEEE
Q ss_conf 899974798699998878829999944998-7311647907983998418-------------82899752677036772
Q T0558 25 LLVGGSGWNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSYS-------------KGAKMITRDGRELWNIA 90 (294)
Q Consensus 25 ~l~~gs~~~~i~~~d~~tg~~~w~~~~~~~-~~~~~~~~~pdG~~l~s~~-------------~~v~~~~~~~~~~~~~~ 90 (294)
+|+.+ .....++|+.+++. |....... ......+...|+++++.+. ..+..+|.... .|+..
T Consensus 18 ~~~~~--~~~~~~ydp~~~~~-~~~~~~~~~pR~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yD~~t~-~W~~l 93 (318)
T 2woz_A 18 ILLVN--DTAAVAYDPMENEC-YLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-EWVGL 93 (318)
T ss_dssp EEEEC--SSEEEEEETTTTEE-EEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT-EEEEC
T ss_pred EEEEC--CCCCEEECCCCCCE-EECCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEEEEEEECCCC-EEEEC
T ss_conf 99988--87766884899978-9526788998354899998999999968666789998644787999918999-79889
Q ss_pred CCCCC--CEEEEEECCCCCEEEEEECCC--C-----EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE
Q ss_conf 37776--314878737875899970589--7-----99998568958899970677677667400899969989999974
Q T0558 91 APAGC--EMQTARILPDGNALVAWCGHP--S-----TILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF 161 (294)
Q Consensus 91 ~~~~~--~v~~~~~~~dg~~l~~~s~~~--~-----~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~g~ 161 (294)
..-+. .-+++.. -+++.+++++.+. . +..++..+. .|+.... - +...........+++.++.+.
T Consensus 94 ~~~p~~R~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~-~---p~~r~~~~~~~~~~~~~~~gg 166 (318)
T 2woz_A 94 PPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKN-L---PIKVYGHNVISHNGMIYCLGG 166 (318)
T ss_dssp SCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECC-C---SSCEESCEEEEETTEEEEECC
T ss_pred CCCCCHHHCCEEEE-ECCEEEEEECCCCCCCCCCCEEEEEECCCC--CCCCCCC-C---CCCCCCCEEEEEEEEEECCCC
T ss_conf 99985132147999-899599991516877840275999818766--2121468-8---743236502344321000478
Q ss_pred C------CCEEEEEECCCCEEEEEECC--CEEEEEEEECCCCEEEECCCCC-----EEEEEECCCCEEEEEECCCCCCCE
Q ss_conf 6------98899993788588985169--7348988734896899735898-----799998789859998448876411
Q T0558 162 A------TSEVREIAPNGQLLNSVKLS--GTPFSSAFLDNGDCLVACGDAH-----CFVQLNLESNRIVRRVNANDIEGV 228 (294)
Q Consensus 162 ~------d~~i~~~d~~g~~~~~~~~~--~~~~~~~~~~~g~~~v~~~~~~-----~i~~~d~~~g~~~~~~~~~~~~~~ 228 (294)
. ...+..++.+...-+....- ..........++.+++.++.++ .+..+|..+++ +..+. +.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~~~--~~p~~ 243 (318)
T 2woz_A 167 KTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK-WEVMT--EFPQE 243 (318)
T ss_dssp EESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC-EEECC--CCSSC
T ss_pred CCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCEEECCCCCE-EEECC--CCCCC
T ss_conf 7677663102441173004341025788643332023047448998675799876621365388996-99948--89988
Q ss_pred EECCCCCEEECCCCCEEEEEC
Q ss_conf 411345348938998999804
Q T0558 229 QLFFVAQLFPLQNGGLYICNW 249 (294)
Q Consensus 229 ~~~~~~~~~~~~~G~i~i~~~ 249 (294)
........-+|++++.+.
T Consensus 244 ---r~~~~~~~~~~~iyv~GG 261 (318)
T 2woz_A 244 ---RSSISLVSLAGSLYAIGG 261 (318)
T ss_dssp ---CBSCEEEEETTEEEEECC
T ss_pred ---CEEEEEEEECCEEEEEEC
T ss_conf ---431599999999999967
Done!