Query T0570 YP_001301802.1, Parabacteroides distasonis atcc 8503, 258 residues
Match_columns 258
No_of_seqs 126 out of 2104
Neff 8.6
Searched_HMMs 22458
Date Tue Jun 1 15:12:26 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0570.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0570.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o55_A Putative glycerophospho 100.0 0 0 356.8 27.6 235 22-258 4-258 (258)
2 1zcc_A Glycerophosphodiester p 100.0 0 0 350.5 23.5 220 25-257 2-236 (248)
3 3ks6_A Glycerophosphoryl diest 100.0 0 0 348.5 24.2 228 24-256 2-244 (250)
4 1vd6_A Glycerophosphoryl diest 100.0 0 0 344.9 25.3 221 19-252 2-222 (224)
5 2oog_A Glycerophosphoryl diest 100.0 0 0 343.2 25.4 229 20-255 19-280 (287)
6 2pz0_A Glycerophosphoryl diest 100.0 0 0 337.9 24.2 229 22-257 9-252 (252)
7 3l12_A Putative glycerophospho 100.0 0 0 327.2 27.4 233 23-257 16-309 (313)
8 2otd_A Glycerophosphodiester p 100.0 0 0 320.5 22.7 224 23-254 5-245 (247)
9 1o1z_A GDPD, glycerophosphodie 100.0 0 0 314.0 24.6 216 16-252 4-233 (234)
10 1ydy_A Glycerophosphoryl diest 100.0 0 0 319.9 18.2 248 5-254 9-356 (356)
11 3i10_A Putative glycerophospho 100.0 0 0 297.5 23.6 230 14-257 7-275 (278)
12 3ch0_A Glycerophosphodiester p 100.0 0 0 297.5 17.8 230 19-250 3-270 (272)
13 1xx1_A Smase I, sphingomyelina 100.0 3.1E-34 1.4E-38 221.6 9.8 215 22-257 3-265 (285)
14 1djx_A PLC-D1, phosphoinositid 97.4 0.00047 2.1E-08 42.6 7.6 52 28-79 177-229 (624)
15 2zkm_X 1-phosphatidylinositol- 97.0 0.00045 2E-08 42.7 3.6 39 41-79 339-379 (799)
16 1geq_A Tryptophan synthase alp 96.4 0.035 1.6E-06 31.5 10.1 40 206-245 180-221 (248)
17 1rd5_A Tryptophan synthase alp 96.2 0.012 5.2E-07 34.3 6.6 193 22-245 15-231 (262)
18 3h4x_A Phosphatidylinositol-sp 95.0 0.16 7.3E-06 27.5 9.5 94 25-129 32-135 (339)
19 1qop_A Tryptophan synthase alp 94.5 0.22 9.6E-06 26.8 9.9 40 205-244 193-234 (268)
20 1vkf_A Glycerol uptake operon 93.3 0.33 1.5E-05 25.7 7.4 135 101-249 41-182 (188)
21 2ekc_A AQ_1548, tryptophan syn 92.4 0.5 2.2E-05 24.6 12.7 39 22-64 14-54 (262)
22 3kts_A Glycerol uptake operon 91.0 0.71 3.2E-05 23.7 7.8 139 101-250 39-185 (192)
23 3ea1_A 1-phosphatidylinositol 89.1 0.99 4.4E-05 22.9 6.3 64 46-127 54-117 (298)
24 1ujp_A Tryptophan synthase alp 86.7 1.4 6.4E-05 21.9 11.4 40 204-245 189-230 (271)
25 2nv1_A Pyridoxal biosynthesis 84.1 1.9 8.5E-05 21.2 5.6 54 200-253 190-254 (305)
26 3a24_A Alpha-galactosidase; gl 84.1 1.5 6.8E-05 21.8 5.1 41 206-246 350-396 (641)
27 3lab_A Putative KDPG (2-keto-3 81.3 2.5 0.00011 20.5 9.1 166 22-242 11-185 (217)
28 2zbt_A Pyridoxal biosynthesis 79.9 2.7 0.00012 20.2 6.3 55 200-254 190-255 (297)
29 2yzr_A Pyridoxal biosynthesis 78.2 3.1 0.00014 19.9 5.2 53 201-253 224-287 (330)
30 1vc4_A Indole-3-glycerol phosp 77.8 3.2 0.00014 19.9 10.0 139 99-244 31-181 (254)
31 2z6i_A Trans-2-enoyl-ACP reduc 77.3 2.8 0.00012 20.2 4.5 40 207-246 152-193 (332)
32 1vhc_A Putative KHG/KDPG aldol 72.7 4.3 0.00019 19.1 12.0 23 40-62 28-50 (224)
33 1m5w_A Pyridoxal phosphate bio 71.5 4.6 0.00021 18.9 13.0 161 38-222 23-192 (243)
34 3bo9_A Putative nitroalkan dio 69.3 5.2 0.00023 18.6 5.3 38 207-244 166-205 (326)
35 3gk0_A PNP synthase, pyridoxin 66.9 5.8 0.00026 18.3 11.6 161 38-222 51-220 (278)
36 2d73_A Alpha-glucosidase SUSB; 65.7 6.1 0.00027 18.2 5.9 41 206-246 421-471 (738)
37 3gyc_A Putative glycoside hydr 63.0 6.9 0.00031 17.9 8.1 145 38-195 34-228 (393)
38 1a53_A IGPS, indole-3-glycerol 62.2 7.1 0.00032 17.8 11.0 82 159-242 91-177 (247)
39 1wbh_A KHG/KDPG aldolase; lyas 61.6 7.3 0.00033 17.7 11.0 34 24-62 16-49 (214)
40 1mxs_A KDPG aldolase; 2-keto-3 60.6 7.6 0.00034 17.6 10.2 22 41-62 38-59 (225)
41 3bic_A Methylmalonyl-COA mutas 59.1 8.1 0.00036 17.5 6.2 54 201-254 668-727 (762)
42 2plj_A Lysine/ornithine decarb 57.9 8.5 0.00038 17.3 7.5 11 209-219 198-208 (419)
43 2htm_A Thiazole biosynthesis p 57.6 7.7 0.00034 17.6 3.4 187 36-255 19-225 (268)
44 3hvb_A Protein FIMX; EAL phosp 55.6 9.3 0.00041 17.1 12.1 136 105-244 257-419 (437)
45 1ud2_A Amylase, alpha-amylase; 55.6 9.3 0.00041 17.1 4.7 21 43-64 82-103 (480)
46 3glc_A Aldolase LSRF; TIM barr 55.0 9.5 0.00042 17.0 4.8 16 208-223 163-178 (295)
47 1pv8_A Delta-aminolevulinic ac 54.5 9.7 0.00043 17.0 4.5 50 207-256 259-330 (330)
48 3hv8_A Protein FIMX; EAL phosp 52.8 10 0.00046 16.8 12.5 137 105-245 88-251 (268)
49 1xm3_A Thiazole biosynthesis p 50.4 11 0.0005 16.6 4.5 188 35-255 18-225 (264)
50 2yw3_A 4-hydroxy-2-oxoglutarat 49.8 12 0.00051 16.5 4.8 22 40-61 24-45 (207)
51 1req_A Methylmalonyl-COA mutas 48.9 12 0.00053 16.5 5.7 54 202-255 661-720 (727)
52 2rbg_A Putative uncharacterize 48.9 11 0.00047 16.7 3.0 30 214-243 62-92 (126)
53 1wpc_A Glucan 1,4-alpha-maltoh 47.3 13 0.00056 16.3 4.8 21 43-64 84-105 (485)
54 2plc_A PI-PLC, phosphatidylino 47.1 13 0.00057 16.3 5.6 62 46-129 49-110 (274)
55 3kzp_A LMO0111 protein, putati 46.8 13 0.00057 16.3 10.1 36 207-242 190-225 (235)
56 2f6u_A GGGPS, (S)-3-O-geranylg 46.3 12 0.00053 16.4 2.9 41 204-245 176-219 (234)
57 3gfz_A Klebsiella pneumoniae B 46.3 13 0.00058 16.2 12.7 133 108-243 232-388 (413)
58 2zvr_A Uncharacterized protein 45.1 9.6 0.00043 17.0 2.3 27 36-62 36-62 (290)
59 3bw2_A 2-nitropropane dioxygen 43.6 14 0.00064 16.0 5.8 40 207-246 198-239 (369)
60 2gjl_A Hypothetical protein PA 42.8 15 0.00066 15.9 5.8 36 208-243 163-200 (328)
61 1viz_A PCRB protein homolog; s 41.4 16 0.00069 15.8 2.9 40 205-245 169-211 (240)
62 2p10_A MLL9387 protein; NP_085 41.1 16 0.0007 15.7 3.9 88 153-244 166-259 (286)
63 1k77_A EC1530, hypothetical pr 40.2 13 0.0006 16.2 2.4 26 36-61 9-35 (260)
64 1ht6_A AMY1, alpha-amylase iso 40.2 16 0.00073 15.6 2.9 20 44-64 71-91 (405)
65 2c71_A Glycoside hydrolase, fa 40.1 14 0.00061 16.1 2.4 16 205-220 168-183 (216)
66 2v5j_A 2,4-dihydroxyhept-2-ENE 39.5 17 0.00074 15.6 10.5 98 152-254 168-269 (287)
67 2d1p_B TUSC, hypothetical UPF0 39.1 15 0.00067 15.9 2.5 51 23-77 2-52 (119)
68 7odc_A Protein (ornithine deca 38.5 17 0.00077 15.5 9.4 19 43-61 116-134 (424)
69 2vws_A YFAU, 2-keto-3-deoxy su 38.3 17 0.00078 15.5 11.0 98 153-255 148-249 (267)
70 3fem_A Pyridoxine biosynthesis 37.7 18 0.0008 15.4 6.1 52 202-253 189-251 (297)
71 1dxe_A 2-dehydro-3-deoxy-galac 36.7 19 0.00083 15.3 9.8 98 152-254 147-248 (256)
72 3da7_A Barnase circular permut 35.8 17 0.00078 15.5 2.4 51 54-117 2-64 (111)
73 1i4n_A Indole-3-glycerol phosp 35.5 19 0.00086 15.2 7.4 32 207-239 141-173 (251)
74 1wv2_A Thiazole moeity, thiazo 35.4 19 0.00087 15.2 5.7 201 23-255 8-234 (265)
75 2v82_A 2-dehydro-3-deoxy-6-pho 35.2 20 0.00087 15.2 12.9 36 22-62 5-40 (212)
76 2r6o_A Putative diguanylate cy 34.4 20 0.0009 15.1 13.3 203 46-254 30-277 (294)
77 3btn_A Antizyme inhibitor 1; T 33.9 21 0.00092 15.0 9.8 20 42-61 115-134 (448)
78 1wdp_A Beta-amylase; (beta/alp 33.7 21 0.00092 15.0 2.6 18 47-64 39-56 (495)
79 1h7n_A 5-aminolaevulinic acid 33.7 21 0.00093 15.0 4.7 50 207-256 270-341 (342)
80 1b1y_A Protein (beta-amylase); 33.6 21 0.00093 15.0 2.6 19 46-64 32-50 (500)
81 1fa2_A Beta-amylase; TIM barre 32.8 22 0.00096 14.9 2.6 22 43-64 35-57 (498)
82 2dh2_A 4F2 cell-surface antige 30.3 24 0.0011 14.7 4.7 10 52-61 47-56 (424)
83 3inp_A D-ribulose-phosphate 3- 29.9 24 0.0011 14.6 6.9 43 212-255 189-241 (246)
84 2yxb_A Coenzyme B12-dependent 26.0 28 0.0013 14.2 7.7 50 205-254 86-140 (161)
85 3ffs_A Inosine-5-monophosphate 25.6 29 0.0013 14.2 5.7 34 210-243 240-274 (400)
86 1f3t_A ODC, ornithine decarbox 24.7 30 0.0013 14.1 8.2 18 43-60 116-133 (425)
87 1w8s_A FBP aldolase, fructose- 24.3 30 0.0014 14.0 4.8 76 105-181 127-205 (263)
88 2w5v_A Alkaline phosphatase; p 24.1 12 0.00055 16.3 0.0 19 1-19 1-19 (375)
89 1g2o_A Purine nucleoside phosp 23.3 32 0.0014 13.9 5.4 24 225-248 189-213 (268)
90 1a3w_A Pyruvate kinase; allost 22.8 33 0.0014 13.9 5.8 110 142-255 200-350 (500)
91 2qjg_A Putative aldolase MJ040 22.1 34 0.0015 13.8 8.4 39 23-61 25-65 (273)
92 2qs7_A Uncharacterized protein 21.2 20 0.00091 15.1 0.6 92 21-122 6-104 (144)
93 1e0t_A Pyruvate kinase, PK; ph 20.5 36 0.0016 13.6 6.3 103 153-255 188-330 (470)
94 2vyo_A ECU11_0510, chitooligos 20.4 31 0.0014 14.0 1.4 16 205-220 195-210 (254)
No 1
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiative, PSI-2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=0 Score=356.77 Aligned_cols=235 Identities=22% Similarity=0.374 Sum_probs=201.8
Q ss_pred CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCC---CCCC-----CCCCCCCHHHHHH
Q ss_conf 6673799813788878886320899999997389999981197348878970476---5543-----4232378888767
Q T0570 22 KDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDN---DIQG-----KHIQSCTYDELKD 93 (258)
Q Consensus 22 ~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~---~l~r-----~~v~~~t~~el~~ 93 (258)
..-|+||||||++....+||||++||++|++.|+++||+|||+||||++||+||+ +++| +.|.++||+||++
T Consensus 4 ~~~P~iiaHRG~~~~~~~PENTl~af~~A~~~G~~~iE~DV~~TkDg~~vv~HD~~d~~l~r~t~~~g~i~~~t~~el~~ 83 (258)
T 2o55_A 4 VIIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDGTSRIGDLSLEELKR 83 (258)
T ss_dssp CCCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTTTTCBGGGSCHHHHTT
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEECCCCCCCCCCHHHHHH
T ss_conf 53755898889888899973289999999986989899877992289889845751234303312544102267999987
Q ss_pred HHCCCCCCCCCHHHHHHHHHHC-CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCC
Q ss_conf 6406777898889999998704-991899852677765321589999999999741258748984798999999997334
Q T0570 94 LQLSNGEKLPTLEQYLKRAKKL-KNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPK 172 (258)
Q Consensus 94 l~~~~g~~iptL~evl~~~~~~-~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~ 172 (258)
+++++++++|||+|+++.++.. .++.+++|+|+...........+.+++.+++++..+|++++||+++.+.++++..|+
T Consensus 84 l~~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~i~~~~~~~rv~i~Sf~~~~l~~~~~~~p~ 163 (258)
T 2o55_A 84 LDVGGGHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKRKESGDHQRLLLLVEKYHMQERVDYCSFHHEALAHLKALCPD 163 (258)
T ss_dssp CBSSSSCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSSTTSSHHHHHHHHHHTTTCGGGEEEEESSHHHHHHHHHHCTT
T ss_pred HHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 43188777897899999757634684651124775321110178999999999707522566466999999999987899
Q ss_pred CCEEEEECCCC---HH----HHHHCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEEC----CCHHHHHHHHHCCCCEE
Q ss_conf 81898742679---78----898528603034523320698899999973997999616----99899999997589988
Q T0570 173 SEVSYLNGELS---PM----ELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTV----DDPKLMEEMIDMGVDFI 241 (258)
Q Consensus 173 ~~~~~l~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTv----n~~~~~~~~~~~GVdgI 241 (258)
++++|+..... +. .....+..++.+.+. ..++++++.+|++|+.|++||| |+++++++++++|||||
T Consensus 164 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~v~~~~~~g~~v~vwTv~~~~n~~~~~~~l~~~GvdgI 241 (258)
T 2o55_A 164 VKITYLFNYMGQPTPLDFVEQACYGDANGVSMLFH--YLTKEQVCTAHEKGLSVTVWMPWIFDDSEEDWKKCLELQVDLI 241 (258)
T ss_dssp CEEEEECCTTSCCCCTTHHHHHHHTTCSEEEEEGG--GCCHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHTCSEE
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCC--CCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCEE
T ss_conf 73999961356677678999988517757750330--0899999999986998999957688984999999997898999
Q ss_pred EECCHHHHHHHHHHHCC
Q ss_conf 70868999999986159
Q T0570 242 TTDLPEETQKILHSRAQ 258 (258)
Q Consensus 242 ~TD~P~~~~~~l~~k~~ 258 (258)
+||+|+.++++|++=+|
T Consensus 242 ~TD~P~~l~~~l~~~~~ 258 (258)
T 2o55_A 242 CSNYPFGLMNFLSNISE 258 (258)
T ss_dssp EESCHHHHHHHHTC---
T ss_pred EECCHHHHHHHHHHCCC
T ss_conf 98969999999986469
No 2
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics, PSI; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=0 Score=350.45 Aligned_cols=220 Identities=22% Similarity=0.307 Sum_probs=185.3
Q ss_pred CEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCC-----CCCCCCCHHHHHHHHCC--
Q ss_conf 37998137888788863208999999973899999811973488789704765543-----42323788887676406--
Q T0570 25 TKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG-----KHIQSCTYDELKDLQLS-- 97 (258)
Q Consensus 25 ~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r-----~~v~~~t~~el~~l~~~-- 97 (258)
++|||||| ++..+||||++||+.|++.|+++||+|||+||||++||+||++++| +.|.++||+||++++++
T Consensus 2 t~iiaHRG--~~~~~pENT~~af~~a~~~G~d~iE~DV~~TkDg~~Vv~HD~~l~r~t~~~~~v~~~t~~el~~l~~~~~ 79 (248)
T 1zcc_A 2 TKIVSHRG--ANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTNGTGPVGHMLSSEIDTLDAGGW 79 (248)
T ss_dssp CEEEETTT--TTTTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSCCSBSTTSCHHHHTTSCSSTT
T ss_pred CEEEECCC--CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 88997899--9999972289999999984989899988991599889823410122234465677705999986440676
Q ss_pred -----CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCC
Q ss_conf -----777898889999998704991899852677765321589999999999741258748984798999999997334
Q T0570 98 -----NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPK 172 (258)
Q Consensus 98 -----~g~~iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~ 172 (258)
.|++||||+|+|+.+++ ++.+++|+|..+ ...++++++++++.++++++||+++.++++++..|+
T Consensus 80 ~~~~~~~~~IPtL~evL~~~~~--~~~l~iEiK~~~--------~~~v~~li~~~~~~~~v~~~Sf~~~~l~~~r~~~P~ 149 (248)
T 1zcc_A 80 FDDRFKGAIVPRLDAYLEHLRG--RAGVYIELKYCD--------PAKVAALVRHLGMVRDTFYFSFSEEMRQGLQSIAPE 149 (248)
T ss_dssp TCGGGTTCCCCBHHHHHHHHTT--TCEEEEEEEESC--------HHHHHHHHHHHTCSTTEEEECSCHHHHHHHHHHCTT
T ss_pred CCCCCCCCCCCCHHHHHHHHHC--CCCEEEEECCCC--------CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
T ss_conf 6521234668849999986512--444035644786--------115678999987641345677988999999997303
Q ss_pred CCEEEEECCCCHHHHHHC--CCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEECCCHHH-HHHHHHCCCCEEEECCHHHH
Q ss_conf 818987426797889852--860303452332069889999997399799961699899-99999758998870868999
Q T0570 173 SEVSYLNGELSPMELKEL--GFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDDPKL-MEEMIDMGVDFITTDLPEET 249 (258)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTvn~~~~-~~~~~~~GVdgI~TD~P~~~ 249 (258)
++++++............ ....+... .....++++++.+|++|+.|++||+|++++ ++++.++|||||+||+|+++
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~Gl~v~~wTvnd~~~~~~~l~~~gVdgIiTD~P~l~ 228 (248)
T 1zcc_A 150 FRRMMTLDIAKSPSLVGAVHHASIIEIT-PAQMRRPGIIEASRKAGLEIMVYYGGDDMAVHREIATSDVDYINLDRPDLF 228 (248)
T ss_dssp SEEEEEHHHHSSTHHHHHTTCCSEEEEC-HHHHHSHHHHHHHHHHTCEEEEECCCCCHHHHHHHHHSSCSEEEESCHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHCCEEECC-HHHHCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEECCHHHH
T ss_conf 6720342234672566777406453045-354179999999998799999973699999999999769999997849999
Q ss_pred HHHHHHHC
Q ss_conf 99998615
Q T0570 250 QKILHSRA 257 (258)
Q Consensus 250 ~~~l~~k~ 257 (258)
+++.++++
T Consensus 229 ~~~r~~~~ 236 (248)
T 1zcc_A 229 AAVRSGMA 236 (248)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999887
No 3
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=0 Score=348.51 Aligned_cols=228 Identities=19% Similarity=0.283 Sum_probs=195.7
Q ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCC-----CCCCCCCHHHHHHHHCC-
Q ss_conf 737998137888788863208999999973899999811973488789704765543-----42323788887676406-
Q T0570 24 NTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG-----KHIQSCTYDELKDLQLS- 97 (258)
Q Consensus 24 ~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r-----~~v~~~t~~el~~l~~~- 97 (258)
-|+|||||| ++..+||||++||++|++.|+++||+|||+||||++||+||++++| +.|.++||+||++++++
T Consensus 2 ~~~iiaHRG--~~~~~pENT~~af~~A~~~G~~~iE~DV~lTkDg~lvv~HD~~l~r~t~~~~~v~~~t~~el~~l~~~~ 79 (250)
T 3ks6_A 2 MTRIASHRG--GTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTDMTGAIVDMTLAKVKTATIRY 79 (250)
T ss_dssp CCEEEEETT--THHHHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBSCCSBGGGSCHHHHHHCCBTT
T ss_pred CCEEEECCC--CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCEEECCCEECCCCHHHHHHHHHHC
T ss_conf 987998999--999998534999999998598989987899029968997488555412024404339899998611002
Q ss_pred -CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEE
Q ss_conf -7778988899999987049918998526777653215899999999997412587489847989999999973348189
Q T0570 98 -NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVS 176 (258)
Q Consensus 98 -~g~~iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~~~~~ 176 (258)
.++++|||+|+++++++ +++.+++|+|+.........+++.+++.+.+++..++++++||++..+..+++..|+..++
T Consensus 80 ~~~~~iptL~e~l~~~~~-~~~~l~iEiK~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~~~~~~~ 158 (250)
T 3ks6_A 80 GAGSHPMTLEELCALYVD-SHVNFRCEIKPGVDGLPYEGFVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLW 158 (250)
T ss_dssp STTCCCEEHHHHHHHHTT-CSCEEEEEECCCTTSCCCTTHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEE
T ss_pred CCCCCCCCHHHHHHHHHC-CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCEE
T ss_conf 688878989999999751-5876314103664333167899999999985167665278508899999999858887289
Q ss_pred EEECCCCH----H----HHHHCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECCHHH
Q ss_conf 87426797----8----898528603034523320698899999973997999616998999999975899887086899
Q T0570 177 YLNGELSP----M----ELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFITTDLPEE 248 (258)
Q Consensus 177 ~l~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI~TD~P~~ 248 (258)
++...... . .....+...+..++ ...++++++.+|++|++|++||||+++++++++++|||||+||+|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GvdgIiTD~P~~ 236 (250)
T 3ks6_A 159 LVSPSVLQQLGPGAVIETAIAHSIHEIGVHI--DTADAGLMAQVQAAGLDFGCWAAHTPSQITKALDLGVKVFTTDRPTL 236 (250)
T ss_dssp EECHHHHHHHHHHHHHHHHHHTTCCEEEEEG--GGCCHHHHHHHHHTTCEEEEECCCSHHHHHHHHHHTCSEEEESCHHH
T ss_pred EEEHHHHHCCCHHHHHHHHHHCCCCEEECCC--CCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEECCHHH
T ss_conf 9601243203378899887633225423252--32799999999986999999889959999999976999999896999
Q ss_pred HHHHHHHH
Q ss_conf 99999861
Q T0570 249 TQKILHSR 256 (258)
Q Consensus 249 ~~~~l~~k 256 (258)
+++++++.
T Consensus 237 a~~~~~~~ 244 (250)
T 3ks6_A 237 AIALRTEH 244 (250)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999974
No 4
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, glycerol complex; 1.30A {Thermus thermophilus HB8} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=0 Score=344.93 Aligned_cols=221 Identities=24% Similarity=0.300 Sum_probs=191.7
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 15666737998137888788863208999999973899999811973488789704765543423237888876764067
Q T0570 19 VAAKDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQLSN 98 (258)
Q Consensus 19 ~~~~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~~~~ 98 (258)
.+.+++|+|||||| ++..+||||++||+.|++.|+++||+|||+||||++||+||++++|+.+.++|++|++..+
T Consensus 2 ~~~~~~PliiaHRG--~~~~~pENT~~af~~A~~~G~d~iE~Dv~~TkDg~lVv~HD~~l~r~~~~~~~~~el~~~~--- 76 (224)
T 1vd6_A 2 TAFRQRPLRLGHRG--APLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTPLGPVFQVDYADLKAQE--- 76 (224)
T ss_dssp -----CCEEEEETS--CTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEETTEEGGGSCHHHHHHHS---
T ss_pred CCCCCCCEEEECCC--CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCCCCCCCCCEECEEHHHHHHHH---
T ss_conf 73435887998899--9999972059999999986989899988994687455026640266510000098873210---
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEE
Q ss_conf 77898889999998704991899852677765321589999999999741258748984798999999997334818987
Q T0570 99 GEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYL 178 (258)
Q Consensus 99 g~~iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~~~~~~l 178 (258)
+++|||+|++++++.++++.+++|+|+.+.. .... +..+++.++..++++++||++..+..+++..|+++++++
T Consensus 77 -~~ip~l~evl~l~~~~~~~~l~iEiK~~~~~--~~~~---~~~l~~~~~~~~~v~~~Sf~~~~l~~~~~~~p~i~~~~l 150 (224)
T 1vd6_A 77 -PDLPRLEEVLALKEAFPQAVFNVELKSFPGL--GEEA---ARRLAALLRGREGVWVSSFDPLALLALRKAAPGLPLGFL 150 (224)
T ss_dssp -TTCCBHHHHHGGGGTCTTCEEEEEECCCTTS--HHHH---HHHHHHHTTTCSSEEEEESCHHHHHHHHHHCTTSCEEEE
T ss_pred -CCCCCHHHHHHHHHHCCCCEEEEECCCCCCH--HHHH---HHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCEEEE
T ss_conf -2598387899999747864021102567430--2788---999999874042243135428889999984146735530
Q ss_pred ECCCCHHHHHHCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECCHHHHHHH
Q ss_conf 42679788985286030345233206988999999739979996169989999999758998870868999999
Q T0570 179 NGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFITTDLPEETQKI 252 (258)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI~TD~P~~~~~~ 252 (258)
........+...+..++...+. ..++++++.+|++|+.|++||||+++++++++++|||||+||+|+++.++
T Consensus 151 ~~~~~~~~~~~~~~~~i~~~~~--~~~~~~v~~~~~~g~~v~~wTvn~~~~~~~l~~~GVdgI~TD~P~~l~~l 222 (224)
T 1vd6_A 151 MAEDHSALLPCLGVEAVHPHHA--LVTEEAVAGWRKRGLFVVAWTVNEEGEARRLLALGLDGLIGDRPEVLLPL 222 (224)
T ss_dssp ESSCCGGGGGGSCCSEEEEBGG--GCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTTCSEEEESCHHHHTTS
T ss_pred CCCCCHHHHCCCCCEEEECHHH--HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEECCHHHHHHC
T ss_conf 1445012102022035740156--76699999999879999998999899999999759899998969998555
No 5
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, structural genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=0 Score=343.24 Aligned_cols=229 Identities=22% Similarity=0.295 Sum_probs=190.5
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH-CCCCEEEEEEEECCCCEEEEECCCCCCC-----CCCCCCCHHHHHH
Q ss_conf 566673799813788878886320899999997-3899999811973488789704765543-----4232378888767
Q T0570 20 AAKDNTKVIAHRGYWKTEGSAQNSIRSLERASE-IGAYGSEFDVHLTADNVLVVYHDNDIQG-----KHIQSCTYDELKD 93 (258)
Q Consensus 20 ~~~~~~~iiaHRG~~~~~~~pENTl~af~~A~~-~G~~~iE~DV~lTkDg~~vv~HD~~l~r-----~~v~~~t~~el~~ 93 (258)
.+..++.|||||| ++..+||||++||+.|+. +|+|+||+||++|+||++||+||++++| +.|.++|++||++
T Consensus 19 ~~~~~~~iIaHRG--~~~~~pENTl~af~~A~~~~Gad~iE~DV~lT~Dg~lVv~HD~~l~r~t~~~~~i~~~t~~el~~ 96 (287)
T 2oog_A 19 LTNERFTTIAHRG--ASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQ 96 (287)
T ss_dssp TTSCSSEEEETTT--TTTTSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSSCCSBGGGSCHHHHTT
T ss_pred CCCCCCEEEECCC--CCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf 7888723898899--89999730599999999974999899878991799889768861131138850246798899853
Q ss_pred HHCC---------------CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC-------CC
Q ss_conf 6406---------------7778988899999987049918998526777653215899999999997412-------58
Q T0570 94 LQLS---------------NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKL-------AK 151 (258)
Q Consensus 94 l~~~---------------~g~~iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~-------~~ 151 (258)
++++ .+++||||+|+++.+. +++.+++|+|+++. .....+.+++.+.++++ ..
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~iptL~evl~~~~--~~~~l~iEiK~~~~---~~~~~~~v~~~l~~~~~~~~~~~~~~ 171 (287)
T 2oog_A 97 LDAGSWFNKKYPKYARASYKNAKVPTLDEILERYG--PNANYYIETKSPDV---YPGMEEQLLASLKKHHLLNNNKLKNG 171 (287)
T ss_dssp SCSSHHHHHHCGGGCCGGGTTCCCCBHHHHHHHHC--TTSCEEEECCCTTT---STTHHHHHHHHHHHTTCSSHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC--CCCCEEEEECCCCC---CCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 56145433345432334587415885999998647--66876898348754---54327899999999765652033453
Q ss_pred CEEEEECCHHHHHHHHHHHCCCCEEEEECCCC-----HHHHHHCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEECCC
Q ss_conf 74898479899999999733481898742679-----7889852860303452332069889999997399799961699
Q T0570 152 RTDYISFNMDACKEFIRLCPKSEVSYLNGELS-----PMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDD 226 (258)
Q Consensus 152 ~viv~Sf~~~~l~~~~~~~p~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTvn~ 226 (258)
+++++||++..+..+++..|.++++++..... ...+..+...+..++......++++++.+|++|+.|++||||+
T Consensus 172 ~i~i~Sf~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~v~~~~~~G~~V~vWTVN~ 251 (287)
T 2oog_A 172 HVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNE 251 (287)
T ss_dssp SEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGGGCCHHHHHHHHHTTCEECCBCCCS
T ss_pred CEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCCCHHHCCHHHHHHHHHCCCEEEEECCCC
T ss_conf 21112377789999998689985899944652134568889988641101156241289999999998799999983899
Q ss_pred HHHHHHHHHCCCCEEEECCHHHHHHHHHH
Q ss_conf 89999999758998870868999999986
Q T0570 227 PKLMEEMIDMGVDFITTDLPEETQKILHS 255 (258)
Q Consensus 227 ~~~~~~~~~~GVdgI~TD~P~~~~~~l~~ 255 (258)
++++++++++|||||+||+|++++++|++
T Consensus 252 ~~~~~~l~~~GVdgIiTD~P~~~~~~l~e 280 (287)
T 2oog_A 252 KADMLRLNKYGVDGVFTNFADKYKEVIKE 280 (287)
T ss_dssp HHHHHHHHHHTCSEEEESCHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCEEEECCHHHHHHHHHC
T ss_conf 99999998669999997749999999971
No 6
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis, hydrolase; 1.91A {Thermoanaerobacter tengcongensis MB4}
Probab=100.00 E-value=0 Score=337.87 Aligned_cols=229 Identities=30% Similarity=0.415 Sum_probs=197.7
Q ss_pred CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCC-----CCCCCCCHHHHHHHHC
Q ss_conf 66737998137888788863208999999973899999811973488789704765543-----4232378888767640
Q T0570 22 KDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG-----KHIQSCTYDELKDLQL 96 (258)
Q Consensus 22 ~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r-----~~v~~~t~~el~~l~~ 96 (258)
+-+|+|||||| ++..+||||++||++|++.|+++||+|||+|+||++||+||++++| +.+.++|++|++++++
T Consensus 9 ~~~pliiaHRG--~~~~~pENT~~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~~~i~~~t~~el~~l~~ 86 (252)
T 2pz0_A 9 SMKTLVIAHRG--DSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTNGEGFVKDFTLEEIKKLDA 86 (252)
T ss_dssp --CCEEEEETT--TTTTSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSSCCSBGGGSCHHHHTTSCS
T ss_pred CCCCEEEECCC--CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 66717998999--9989983059999999985989899877883599689967741221138985221300888864210
Q ss_pred C-------CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
Q ss_conf 6-------777898889999998704991899852677765321589999999999741258748984798999999997
Q T0570 97 S-------NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRL 169 (258)
Q Consensus 97 ~-------~g~~iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~ 169 (258)
+ .++++|+++|++..+.+. ...+.+|+|..... .....+.+.+.+.++++.++++++||+++.++.+++.
T Consensus 87 ~~~~~~~~~~~~i~~~~e~~~~~~~~-~~~~~~~~k~~~~~--~~~~~~~v~~~l~~~~~~~~vi~~sf~~~~l~~~~~~ 163 (252)
T 2pz0_A 87 GIKFGEKFAGERIPTLYEVFELIGDK-DFLVNIEIKSGIVL--YPGIEEKLIKAIKEYNFEERVIISSFNHYSLRDVKKM 163 (252)
T ss_dssp STTTCGGGTTCCCCBHHHHHHHHTTS-CCEEEEEECCSSCC--CTTHHHHHHHHHHHTTCTTTEEEEESBHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCC-CCCHHEECCCCCCC--CCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 22346556887688099999987503-41000002577555--6147999999999739988889996888998889986
Q ss_pred HCCCCEEEEECCCCHH---HHHHCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECCH
Q ss_conf 3348189874267978---8985286030345233206988999999739979996169989999999758998870868
Q T0570 170 CPKSEVSYLNGELSPM---ELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFITTDLP 246 (258)
Q Consensus 170 ~p~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI~TD~P 246 (258)
.|.+++++........ .....+..++...+ ...++++++.+|++|++|++||||+++++++++++|||||+||+|
T Consensus 164 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~v~~~~~~g~~v~~wTvn~~~~~~~l~~~GvdgI~TD~P 241 (252)
T 2pz0_A 164 APHLKIGLLYQCGLVEPWHMALRMEAYSLHPFY--FNIIPELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGIITDDP 241 (252)
T ss_dssp CTTSEEEEEECSBCSSTHHHHHHTTCSEEEEBG--GGCCHHHHHHHHHTTCEECCBCCCSHHHHHHHHHHTCSEEEESCH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCH--HHCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEECCH
T ss_conf 998708998316766557765420432347303--103699999999879999998089899999999759999997939
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999998615
Q T0570 247 EETQKILHSRA 257 (258)
Q Consensus 247 ~~~~~~l~~k~ 257 (258)
+.+.++++++|
T Consensus 242 ~~l~~~lr~~g 252 (252)
T 2pz0_A 242 ETLINLVRKGG 252 (252)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHHHHCC
T ss_conf 99999998568
No 7
>3l12_A Putative glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=0 Score=327.15 Aligned_cols=233 Identities=28% Similarity=0.410 Sum_probs=191.0
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCC---------------CCCCCC
Q ss_conf 67379981378887888632089999999738999998119734887897047655434---------------232378
Q T0570 23 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGK---------------HIQSCT 87 (258)
Q Consensus 23 ~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~---------------~v~~~t 87 (258)
+.++|||||| ++..+||||++||++|+++|+|+||+|||+||||++||+||.+++|. .+.++|
T Consensus 16 ~~~~iiaHRG--~~~~~PENT~~a~~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~l~r~~~~~~~~~~~~~~~~~i~~~t 93 (313)
T 3l12_A 16 SVVRVIGHRG--ARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDGQGHWLTGAERQVAEMT 93 (313)
T ss_dssp TBCEEEEETT--TTTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBCTTSCBCCSSCCBGGGSC
T ss_pred CCCEEEECCC--CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCC
T ss_conf 9727997899--89999742699999999869898998779923999899688733332035676545678764344499
Q ss_pred HHHHHHHHCC------------------CCCCCCCHHHHHHHHHHC--CCCEEEEEECCCCCCCC----CHHHHHHHHHH
Q ss_conf 8887676406------------------777898889999998704--99189985267776532----15899999999
Q T0570 88 YDELKDLQLS------------------NGEKLPTLEQYLKRAKKL--KNIRLIFELKSHDTPER----NRDAARLSVQM 143 (258)
Q Consensus 88 ~~el~~l~~~------------------~g~~iptL~evl~~~~~~--~~~~l~ieiK~~~~~~~----~~~~~~~~~~~ 143 (258)
++||++++++ +++++|+|+|+++.+... ..+.+++|+|.+..... .......+++.
T Consensus 94 ~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~l~~~~~~~~~~~~~~~e~k~~~~~~~~~~~~~~~~~~~~~~ 173 (313)
T 3l12_A 94 YAEIRALDVGGLDGRTVYGRRFPDQAFLTGIHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHDHAARAEMVAAVLAD 173 (313)
T ss_dssp HHHHHTSBCSSCCTTSHHHHHSTTSCCCSSCCCCBHHHHHHHHHTTGGGCCEEEEEECCCGGGTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99997465578667654333465422346877786999999998614566303331256753000102478899999999
Q ss_pred HHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHH------HCC----------------CEEECCCHHH
Q ss_conf 997412587489847989999999973348189874267978898------528----------------6030345233
Q T0570 144 VKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELK------ELG----------------FTGLDYHYKV 201 (258)
Q Consensus 144 i~~~~~~~~viv~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~------~~~----------------~~~~~~~~~~ 201 (258)
+++++..++++++||+++.+.++++..|.++++++.......+.. ... ..+.......
T Consensus 174 i~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
T 3l12_A 174 VRRYRMEPRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYF 253 (313)
T ss_dssp HHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------CCCTTTCCSCHHHHHHHHTCSEEEEBG
T ss_pred HHHCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 98628877479995999999999986999868998732422120445443221521555356778899851883114424
Q ss_pred HHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHC
Q ss_conf 20698899999973997999616998999999975899887086899999998615
Q T0570 202 LQSHPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFITTDLPEETQKILHSRA 257 (258)
Q Consensus 202 ~~~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI~TD~P~~~~~~l~~k~ 257 (258)
...++++++.+|++|+.|++||||+++++++++++||||||||+|++++++|+++|
T Consensus 254 ~~~~~~lv~~~~~~gl~v~~wTvn~~~~~~~~~~~GvdgIiTD~P~~~~~~l~~~g 309 (313)
T 3l12_A 254 LDVTPELVAEAHDLGLIVLTWTVNEPEDIRRMATTGVDGIVTDYPGRTQRILIDMG 309 (313)
T ss_dssp GGCCHHHHHHHHHTTCEEEEBCCCSHHHHHHHHHHTCSEEEESCHHHHHHHHHHTT
T ss_pred HCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC
T ss_conf 10899999999987998999799989999999865999999783999999999769
No 8
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics, MCSG, PSI-2, protein structure initiative, midwest center for structural genomics; 2.60A {Shigella flexneri}
Probab=100.00 E-value=0 Score=320.47 Aligned_cols=224 Identities=22% Similarity=0.299 Sum_probs=186.2
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCC-----CCCCCCCHHHHHHHHCC
Q ss_conf 6737998137888788863208999999973899999811973488789704765543-----42323788887676406
Q T0570 23 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG-----KHIQSCTYDELKDLQLS 97 (258)
Q Consensus 23 ~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r-----~~v~~~t~~el~~l~~~ 97 (258)
..|+|||||| ++..+||||++||++|++.|+++||+||++|+||++|++||++++| +.+.++|++||++++++
T Consensus 5 ~~p~iiaHRG--~~~~~peNT~~a~~~a~~~G~~~iE~Dv~~T~Dg~lV~~HD~~l~r~~~~~~~i~~~~~~el~~l~~~ 82 (247)
T 2otd_A 5 PYPRIVAHRG--GGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAG 82 (247)
T ss_dssp CCCSEEETTT--TTTSSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSSCCSBGGGSCHHHHTTCCSS
T ss_pred CCCEEEECCC--CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHCCHHHHHHCCCC
T ss_conf 9885898799--99999732699999999849898999889915997899656300101688876543789999626757
Q ss_pred -------CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH--HCCCCCEEEEECCHHHHHHHHH
Q ss_conf -------7778988899999987049918998526777653215899999999997--4125874898479899999999
Q T0570 98 -------NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKR--MKLAKRTDYISFNMDACKEFIR 168 (258)
Q Consensus 98 -------~g~~iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~--~~~~~~viv~Sf~~~~l~~~~~ 168 (258)
++++||||+|+++++++. ...+++|+|..... ......++....+ +...++++++||+++.+..+++
T Consensus 83 ~~~~~~~~~~~i~tl~evl~~~~~~-~~~~~leiK~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~sf~~~~~~~~~~ 158 (247)
T 2otd_A 83 SWYSKAFKGEPLPLLSQVAERCREH-GMMANIEIKPTTGT---GPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQQ 158 (247)
T ss_dssp TTTCGGGTTCCCCBHHHHHHHHHHT-TCEEEEEECCCTTC---HHHHHHHHHHHHHHHTTTSCCCEEEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHCC-CEEEEEEECCCCCC---CHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHH
T ss_conf 7644357998788389999872200-11233652266554---3267899999987641147873898555999999998
Q ss_pred HHCCCCEEEEECCCCHHH---HHHCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECC
Q ss_conf 733481898742679788---98528603034523320698899999973997999616998999999975899887086
Q T0570 169 LCPKSEVSYLNGELSPME---LKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFITTDL 245 (258)
Q Consensus 169 ~~p~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI~TD~ 245 (258)
..|.+.++++........ ....++.++.+++. ..++++++.+|++|+.|++||||+++++++++++|||||+||+
T Consensus 159 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~i~~~~~~g~~v~~wTvn~~~~~~~l~~~GvdgI~TD~ 236 (247)
T 2otd_A 159 AAPELPRGLLLDEWRDDWRELTARLGCVSIHLNHK--LLDKARVMQLKDAGLRILVYTVNKPQHAAELLRWGVDCICTDA 236 (247)
T ss_dssp HCTTSCEEEEESSCCTTHHHHHHHHTCSEEEEEGG--GCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHTCSEEEESC
T ss_pred HCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCC--CCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEECC
T ss_conf 49877389982465032999987439418753433--3899999999987999999905989999999867989999798
Q ss_pred HHHHHHHHH
Q ss_conf 899999998
Q T0570 246 PEETQKILH 254 (258)
Q Consensus 246 P~~~~~~l~ 254 (258)
|+++...+.
T Consensus 237 P~~l~~~~~ 245 (247)
T 2otd_A 237 IDVIGPNFT 245 (247)
T ss_dssp TTTSCTTCC
T ss_pred HHHCCCCCC
T ss_conf 366170013
No 9
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), structural genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=0 Score=314.04 Aligned_cols=216 Identities=25% Similarity=0.372 Sum_probs=170.9
Q ss_pred HHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCC-----CCCCCCCHHH
Q ss_conf 74115666737998137888788863208999999973899999811973488789704765543-----4232378888
Q T0570 16 AGMVAAKDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG-----KHIQSCTYDE 90 (258)
Q Consensus 16 ~~~~~~~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r-----~~v~~~t~~e 90 (258)
.++....+...|||||| ++..+||||++||+.|++.|+++||+|||+|+||++||+||++++| +.|.++|++|
T Consensus 4 ~~~~~~~~~vliiaHRG--~~~~~pENTl~af~~A~~~G~d~iE~DV~~TkDg~lVv~HD~~l~R~t~~~~~v~~~t~~e 81 (234)
T 1o1z_A 4 DKIHHHHHHVIVLGHRG--YSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGLDVKIRDATVSE 81 (234)
T ss_dssp -----CCCCCEEEEETT--TTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHCEEEEGGGSCHHH
T ss_pred CCCCCCCCCEEEEECCC--CCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHEEECCCCEEECCCHHH
T ss_conf 53333464189998999--9999971059999999985989899888991699888606413201321244153165344
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
Q ss_conf 76764067778988899999987049918998526777653215899999999997412587489847989999999973
Q T0570 91 LKDLQLSNGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLC 170 (258)
Q Consensus 91 l~~l~~~~g~~iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~ 170 (258)
|++++. ++||||+|+|+.+++ +..+++|+|..+ ..+.+++.++ ..++++++||+++.++ +..
T Consensus 82 L~~l~~---~~iptL~evl~~~~~--~~~l~iEiK~~~-------~~~~~~~~~~---~~~~v~i~Sf~~~~l~---~~~ 143 (234)
T 1o1z_A 82 LKELTD---GKITTLKEVFENVSD--DKIINIEIKERE-------AADAVLEISK---KRKNLIFSSFDLDLLD---EKF 143 (234)
T ss_dssp HHHHTT---TCCCBHHHHHHHSCT--TSEEEEEECCGG-------GHHHHHHHHT---TCCSEEEEESCHHHHH---HHC
T ss_pred HHHHCC---CCCCCHHHHHHHCCC--CCEEEEEECCCH-------HHHHHHHHHH---HCCCEEECCCCHHHHH---HHH
T ss_conf 444303---679859999972666--661568723640-------4689999996---3152234147889999---997
Q ss_pred CCCCEEEEECCCCHH---H----HHHCCCEEECCCHHHH--HCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEE
Q ss_conf 348189874267978---8----9852860303452332--069889999997399799961699899999997589988
Q T0570 171 PKSEVSYLNGELSPM---E----LKELGFTGLDYHYKVL--QSHPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFI 241 (258)
Q Consensus 171 p~~~~~~l~~~~~~~---~----~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI 241 (258)
|..+++++....... . .......++...+... ...+++++.+|++|+.|++||||+++.+ +++++|||||
T Consensus 144 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~v~~wTVNd~e~~-~~l~~gVdgI 222 (234)
T 1o1z_A 144 KGTKYGYLIDEENYGSIENFVERVEKERPYSLHVPYQAFELEYAVEVLRSFRKKGIVIFVWTLNDPEIY-RKIRREIDGV 222 (234)
T ss_dssp TTSCEEEECCTTTTCSHHHHHHHHHHHCCSEEEEEGGGGGSHHHHHHHHHHHHTTCEEEEESCCCHHHH-HHHGGGCSEE
T ss_pred HCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHH-HHHHCCCCEE
T ss_conf 338747885044444188999875430441026651221056579999999987999999899979999-9997499999
Q ss_pred EECCHHHHHHH
Q ss_conf 70868999999
Q T0570 242 TTDLPEETQKI 252 (258)
Q Consensus 242 ~TD~P~~~~~~ 252 (258)
+||+|+++.++
T Consensus 223 iTD~P~~~~~v 233 (234)
T 1o1z_A 223 ITDEVELFVKL 233 (234)
T ss_dssp EESCHHHHHHT
T ss_pred EECCHHHHHHC
T ss_conf 98839999861
No 10
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structure initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=0 Score=319.90 Aligned_cols=248 Identities=25% Similarity=0.310 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHH--HCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCC-
Q ss_conf 9999999999974--1156667379981378887888632089999999738999998119734887897047655434-
Q T0570 5 STLLLLLCLMMAG--MVAAKDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGK- 81 (258)
Q Consensus 5 ~~~l~~~~~~~~~--~~~~~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~- 81 (258)
++.+.+.|+.+.. ..+..+.|.|||||| ++..+||||++||+.|++.|+|+||+|||+||||++||+||.+++|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~lIIaHRG--~~~~~PENT~~af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~l~r~t 86 (356)
T 1ydy_A 9 SMAIMMSTIVMGSSAMAADSNEKIVIAHRG--ASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVT 86 (356)
T ss_dssp --------------------CCCEEEETTT--TTTTSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTTB
T ss_pred HHHHHHHHHHHCCHHHHHCCCCCEEEECCC--CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCC
T ss_conf 999999999852325441689947997889--888997227999999998597989987688058987970475123444
Q ss_pred ----------------CCCCCCHHHHHHHHCC----------------------CCCCCCCHHHHHHHHHH-----CCCC
Q ss_conf ----------------2323788887676406----------------------77789888999999870-----4991
Q T0570 82 ----------------HIQSCTYDELKDLQLS----------------------NGEKLPTLEQYLKRAKK-----LKNI 118 (258)
Q Consensus 82 ----------------~v~~~t~~el~~l~~~----------------------~g~~iptL~evl~~~~~-----~~~~ 118 (258)
.+.++||+|+++++++ +++++|||+|+++.++. ..++
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~~~~~~~~~~ 166 (356)
T 1ydy_A 87 DVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNI 166 (356)
T ss_dssp SHHHHSTTCCCTTSCCBGGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 78877543212367751330547654224643356655554322244545445677656769999999887676408984
Q ss_pred EEEEEECCCCCC-CCCHHHHHHHHHHHHHHC---CCCCEEEEECCHHHHHHHHH-HHCCCCEE----EEECC--------
Q ss_conf 899852677765-321589999999999741---25874898479899999999-73348189----87426--------
Q T0570 119 RLIFELKSHDTP-ERNRDAARLSVQMVKRMK---LAKRTDYISFNMDACKEFIR-LCPKSEVS----YLNGE-------- 181 (258)
Q Consensus 119 ~l~ieiK~~~~~-~~~~~~~~~~~~~i~~~~---~~~~viv~Sf~~~~l~~~~~-~~p~~~~~----~l~~~-------- 181 (258)
.+++|+|.+... .......+.+.+.+...+ ..++++++||+++.+..+++ ..|.+... .....
T Consensus 167 ~~~iEiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (356)
T 1ydy_A 167 GIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQ 246 (356)
T ss_dssp EEEEEECCHHHHHHTTCCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEE
T ss_pred CCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHCC
T ss_conf 01014577520111010288999999998455666643898318999999999974856433543033202354101001
Q ss_pred ---------------CCHHHHHHC--CCEEECCCHH---------HHHCCHHHHHHHHHCCCEEEEEECCCHHHHH----
Q ss_conf ---------------797889852--8603034523---------3206988999999739979996169989999----
Q T0570 182 ---------------LSPMELKEL--GFTGLDYHYK---------VLQSHPDWVKDCKVLGMTSNVWTVDDPKLME---- 231 (258)
Q Consensus 182 ---------------~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~v~~~~~~g~~v~~wTvn~~~~~~---- 231 (258)
..+..++.. .+.++...+. .....+.+|+.+|++|+.|++||||+++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~lV~~~~~~Gl~V~~wTvn~~~~~~~~~d 326 (356)
T 1ydy_A 247 KQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPD 326 (356)
T ss_dssp ECTTSCEEECCCGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTSCCTTCSS
T ss_pred CCCCCCCCCCCHHHHCCHHHHHHHHHHCCEECCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHCCC
T ss_conf 34433234541565407678999985277621436422543356544479999999998799999975588688763358
Q ss_pred -------HHHHCCCCEEEECCHHHHHHHHH
Q ss_conf -------99975899887086899999998
Q T0570 232 -------EMIDMGVDFITTDLPEETQKILH 254 (258)
Q Consensus 232 -------~~~~~GVdgI~TD~P~~~~~~l~ 254 (258)
.+.++||||||||+|++++++|.
T Consensus 327 ~~~~~~~~~~~~GVdgIiTD~P~~~~~~l~ 356 (356)
T 1ydy_A 327 VNQLYDALYNKAGVNGLFTDFPDKAVKFLN 356 (356)
T ss_dssp HHHHHHHHHTTSCCSEEEESCHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCEEEECCHHHHHHHHC
T ss_conf 999999999865987999888989999769
No 11
>3i10_A Putative glycerophosphoryl diester phosphodiesterase; NP_812074.1, structural genomics; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=0 Score=297.48 Aligned_cols=230 Identities=19% Similarity=0.183 Sum_probs=176.6
Q ss_pred HHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCC-----CCCCCCCH
Q ss_conf 9974115666737998137888788863208999999973899999811973488789704765543-----42323788
Q T0570 14 MMAGMVAAKDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG-----KHIQSCTY 88 (258)
Q Consensus 14 ~~~~~~~~~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r-----~~v~~~t~ 88 (258)
.-..+.+..++|+|||||| ++..+||||++||++|++.|+++||+|||+||||++||+||++++| +.+.++|+
T Consensus 7 ~~~~~~~~~~~~liiaHRG--~~~~~pENT~~af~~a~~~g~~~iE~DV~lTkDg~lVv~HD~~l~r~t~~~~~~~~~t~ 84 (278)
T 3i10_A 7 KNTFLNPKSNKVLVVAHRG--NWRSAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTTGKGEIKNWTL 84 (278)
T ss_dssp HHHHTCTTCCSCEEEEETS--CTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBSCCSBGGGSCH
T ss_pred HHHHHCCCCCCEEEEECCC--CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHH
T ss_conf 8886188889839998799--89999843199999999859898998789935997899517742421234565213566
Q ss_pred HHHHHHHCCC------CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHH
Q ss_conf 8876764067------7789888999999870499189985267776532158999999999974125874898479899
Q T0570 89 DELKDLQLSN------GEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDA 162 (258)
Q Consensus 89 ~el~~l~~~~------g~~iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~ 162 (258)
+||+++++++ ++++|+|+|+++... +++.+++|+|.+ ..+.+++.+.+++..++++++||++..
T Consensus 85 ~el~~l~~~~~~~~~~~~~~~~l~e~l~~~~--~~~~l~iEiK~~--------~~~~l~~~l~~~~~~~~v~i~Sf~~~~ 154 (278)
T 3i10_A 85 ADIKKLKLKDKDGKVTNYVVPTLEEALLTAK--GKIMVNLDKAYD--------IFDDVYAILEKTETQNQVIMKGGQPIE 154 (278)
T ss_dssp HHHTTSCBBCTTSCBCSCCCCBHHHHHHHHT--TTSEEEEESCGG--------GHHHHHHHHHHHTCGGGEEEEESSCHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHC--CCCCCEEEECCC--------HHHHHHHHHHHHCCCCCEEEEECCHHH
T ss_conf 6554432035777656667886999998740--343424784353--------267899998750866768999699999
Q ss_pred HHHHHHHHCCC---CEEE-EECCCC--HHH-----HHHCCCEEECC-CHHHHHCCHHHHHHHHHCCCEEEE---------
Q ss_conf 99999973348---1898-742679--788-----98528603034-523320698899999973997999---------
Q T0570 163 CKEFIRLCPKS---EVSY-LNGELS--PME-----LKELGFTGLDY-HYKVLQSHPDWVKDCKVLGMTSNV--------- 221 (258)
Q Consensus 163 l~~~~~~~p~~---~~~~-l~~~~~--~~~-----~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~g~~v~~--------- 221 (258)
. ++...+.. .... ...... ... .......++.. ........++++..+|.+|+.+++
T Consensus 155 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~~t~~~~~~~ 232 (278)
T 3i10_A 155 T--VKREFGSYLDKVLYMPVIDLGNKEAEKIITDYLKELRPAAFEIIYSDPKNPLPPKIKQLLFKKSLIWYNTLWGSLAG 232 (278)
T ss_dssp H--HHHHHGGGTTTSEEEEEEETTSTTHHHHHHHHHHHTCCSEEEEEBCCTTCSSHHHHHHHHTTTSEEEEECSSGGGBT
T ss_pred H--HHHHCHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEHHHHHHC
T ss_conf 9--99966202644256555504505566657888753375525674056342589999999986987999514657657
Q ss_pred ------EECCCHHHHHHHHH-CCCCEEEECCHHHHHHHHHHHC
Q ss_conf ------61699899999997-5899887086899999998615
Q T0570 222 ------WTVDDPKLMEEMID-MGVDFITTDLPEETQKILHSRA 257 (258)
Q Consensus 222 ------wTvn~~~~~~~~~~-~GVdgI~TD~P~~~~~~l~~k~ 257 (258)
||+|+++.|++++. +|||||+||+|..++++|++||
T Consensus 233 ~~~~~~wt~n~~~~~~~l~~~~GvDgI~TD~P~~l~~~l~~~g 275 (278)
T 3i10_A 233 NHDDNLALTDPEKSYGYLIEQLGARILQTDQPAYLLDYLRKKG 275 (278)
T ss_dssp TCCHHHHHHCHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC
T ss_conf 8863165219899999999965999999397999999999769
No 12
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, structural genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=0 Score=297.54 Aligned_cols=230 Identities=26% Similarity=0.381 Sum_probs=178.2
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCC-----------------
Q ss_conf 156667379981378887888632089999999738999998119734887897047655434-----------------
Q T0570 19 VAAKDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGK----------------- 81 (258)
Q Consensus 19 ~~~~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~----------------- 81 (258)
.....++.|||||| ++..+||||++||++|++.|+++||+|||+||||++||+||++++|+
T Consensus 3 ~~~~~~~~iiaHRG--~~~~~pENTl~af~~A~~~G~~~iE~DV~~TkDg~lVv~HD~~l~r~t~~~~~~~~~~~~~~~~ 80 (272)
T 3ch0_A 3 IQVPASFDIQGHRG--CRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTEANEKN 80 (272)
T ss_dssp CCCCTTCEEEETTT--TTTTSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECCTTTGGG
T ss_pred CCCCCCCEEEECCC--CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77899876996699--8999985359999999985979999987681189389978860032456553444333366630
Q ss_pred -CCCCCCHHHHHHHHCCC--------CCCCCC----HHHHHHHHHHC-CCCEEEEEECCC----CCCC-CCHHHHHHHHH
Q ss_conf -23237888876764067--------778988----89999998704-991899852677----7653-21589999999
Q T0570 82 -HIQSCTYDELKDLQLSN--------GEKLPT----LEQYLKRAKKL-KNIRLIFELKSH----DTPE-RNRDAARLSVQ 142 (258)
Q Consensus 82 -~v~~~t~~el~~l~~~~--------g~~ipt----L~evl~~~~~~-~~~~l~ieiK~~----~~~~-~~~~~~~~~~~ 142 (258)
.+.+.|++|+++++++. +++.|+ |++.++.+... ..+....+++.. .... ....+.+.++.
T Consensus 81 ~~~~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (272)
T 3ch0_A 81 FNLYAMNYADIKEIDVGMKTHPRFKSQKKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNIALFCDLVVA 160 (272)
T ss_dssp SBGGGSCHHHHTTSCCSSSCCTTCTTSCCCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTTBCCHHHHHHHHHH
T ss_pred CEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHH
T ss_conf 12404889999645546544645566677752777899998888865033145501201113454332459999999999
Q ss_pred HHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHH--HHHCCCEEECCCHHHHHCCHHHHHHHHHCCCEEE
Q ss_conf 99974125874898479899999999733481898742679788--9852860303452332069889999997399799
Q T0570 143 MVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPME--LKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSN 220 (258)
Q Consensus 143 ~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~ 220 (258)
.+.+++...+++++||+++.+.++++..|++++++......... +.........++......++++++.+|++|+.|+
T Consensus 161 ~i~~~~~~~~~~~~sf~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gl~V~ 240 (272)
T 3ch0_A 161 EIKKAHITDRFTLQSFDVRALEYMHSQYPDIKLSYLVETKGTLKKQLEKLSFTPAVYSPDVTLVSKKDIDAAHKLGMRVI 240 (272)
T ss_dssp HHHHTTCGGGEEEEESCHHHHHHHHHHCTTSEEEEEECSSCCHHHHHTTSSSCCSEEEEBGGGCCHHHHHHHHHTTCEEC
T ss_pred HHHHCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHCCCEEE
T ss_conf 99863776239998388899999998689952999840476226678885247859704412179999999998799999
Q ss_pred EEECCCHHHHHHHHHCCCCEEEECCHHHHH
Q ss_conf 961699899999997589988708689999
Q T0570 221 VWTVDDPKLMEEMIDMGVDFITTDLPEETQ 250 (258)
Q Consensus 221 ~wTvn~~~~~~~~~~~GVdgI~TD~P~~~~ 250 (258)
+||||+++++++++++|||||+||+|+++.
T Consensus 241 ~wtvn~~~~~~~~~~~GVdgI~TD~P~~~~ 270 (272)
T 3ch0_A 241 PWTVNTKEEIETLISLGVDGIITDYPDLFF 270 (272)
T ss_dssp CBCCCSHHHHHHHHHHTCSEEEESCGGGGT
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCHHHHH
T ss_conf 989999999999985597999988688862
No 13
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=100.00 E-value=3.1e-34 Score=221.64 Aligned_cols=215 Identities=16% Similarity=0.174 Sum_probs=122.3
Q ss_pred CCCCE-EEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCC-------CCCCCCHHHHHH
Q ss_conf 66737-9981378887888632089999999738999998119734887897047655434-------232378888767
Q T0570 22 KDNTK-VIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGK-------HIQSCTYDELKD 93 (258)
Q Consensus 22 ~~~~~-iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~-------~v~~~t~~el~~ 93 (258)
.++|. +|||| |||++||+.|+++|+|+||+|||+||||++||+||.+++++ .+.++ ++++++
T Consensus 3 ~~~p~~~~~hr---------~NTl~af~~Ai~~Gad~iE~DV~lTkDg~lVv~HD~~ld~~r~~~~~~~v~d~-l~~l~~ 72 (285)
T 1xx1_A 3 NRRPIWNLAHM---------VNAVAQIPDFLDLGANALEADVTFKGSVPTYTYHGTPCDFGRDCIRWEYFNVF-LKTLRE 72 (285)
T ss_dssp CSEEEEEEESC---------CCSTTHHHHHHHHTCSEEEEEEEEETTEEEEEECCSSCCTTSCSCCEEEHHHH-HHHHHH
T ss_pred CCCCCEEECCH---------HHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEHHHH-HHHHHH
T ss_conf 88886553110---------03899999999869599999972867990899759976678358997117578-999986
Q ss_pred HHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCH-----HHHHHHHHHHHHHCCC--CCEEEEE-CC---HHH
Q ss_conf 64067778988899999987049918998526777653215-----8999999999974125--8748984-79---899
Q T0570 94 LQLSNGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNR-----DAARLSVQMVKRMKLA--KRTDYIS-FN---MDA 162 (258)
Q Consensus 94 l~~~~g~~iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~-----~~~~~~~~~i~~~~~~--~~viv~S-f~---~~~ 162 (258)
++..++ |++.|. -..+..++|......... .....+...+...... ....+.+ .+ ...
T Consensus 73 ~~~~~~---~~~~e~--------~~~~~~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (285)
T 1xx1_A 73 YTTPGN---AKYRDG--------FILFVLDLKTGSLSNDQVRPAGENVAKELLQNYWNNGNNGGRAYVVLSLPDIGHYEF 141 (285)
T ss_dssp HTSTTC---TTCCTT--------CCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTSGGGSSCCCCEEEEEESCGGGHHH
T ss_pred CCCCCC---CCCHHH--------HHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHEECCCHHHHHHH
T ss_conf 246789---873888--------888765402442106552101577999999987404531002311013420778999
Q ss_pred HHHHHHH---------HCCCCEEEEE----CCCCHH----HHHHCCCE-------EECCCHH-----HHHCCHHHHHHHH
Q ss_conf 9999997---------3348189874----267978----89852860-------3034523-----3206988999999
Q T0570 163 CKEFIRL---------CPKSEVSYLN----GELSPM----ELKELGFT-------GLDYHYK-----VLQSHPDWVKDCK 213 (258)
Q Consensus 163 l~~~~~~---------~p~~~~~~l~----~~~~~~----~~~~~~~~-------~~~~~~~-----~~~~~~~~v~~~~ 213 (258)
+..+... .+.+...+.. ...... .+...+.. ++..... ...........+|
T Consensus 142 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 221 (285)
T 1xx1_A 142 VRGFKEVLKKEGHEDLLEKVGYDFSGPYLPSLPTLDATHEAYKKAGVDGHIWLSDGLTNFSPLGDMARLKEAIKSRDSAN 221 (285)
T ss_dssp HHHHHHHHHHTTCGGGGGGEEEEECCCCSSSCCCHHHHHHHHHHHTCCSCBEEEECSCCSSHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 87568999998689888887652222354314718899999985576411122014553212411788999999899997
Q ss_pred HCCCEEEEEECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHC
Q ss_conf 73997999616998999999975899887086899999998615
Q T0570 214 VLGMTSNVWTVDDPKLMEEMIDMGVDFITTDLPEETQKILHSRA 257 (258)
Q Consensus 214 ~~g~~v~~wTvn~~~~~~~~~~~GVdgI~TD~P~~~~~~l~~k~ 257 (258)
+.|++|++||||++++|++++++||||||||+|+++.++|++++
T Consensus 222 ~~g~kV~~WTvN~~~~~~~l~~~GVDGIiTD~Pd~l~~ilk~~~ 265 (285)
T 1xx1_A 222 GFINKIYYWSVDKVSTTKAALDVGVDGIMTNYPNVLIGVLKESG 265 (285)
T ss_dssp CCCCEEEEECCCSHHHHHHHHHHTCSEEEESCHHHHHHHHHSTT
T ss_pred HCCCEEEEECCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHCC
T ss_conf 67998999848989999999957989998598999999986067
No 14
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=97.42 E-value=0.00047 Score=42.57 Aligned_cols=52 Identities=19% Similarity=0.242 Sum_probs=41.1
Q ss_pred EEECCCC-CCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCC
Q ss_conf 9813788-878886320899999997389999981197348878970476554
Q T0570 28 IAHRGYW-KTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQ 79 (258)
Q Consensus 28 iaHRG~~-~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~ 79 (258)
-+|.-|- |....-+-|..++..|+..||++||+|++=-.||+|||.|=.|+.
T Consensus 177 sshntyl~~~ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~piv~HG~t~t 229 (624)
T 1djx_A 177 SSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFT 229 (624)
T ss_dssp EESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSCC
T ss_pred CCCCCEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCC
T ss_conf 05775122672356665799999998399689997012899995782088677
No 15
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=96.97 E-value=0.00045 Score=42.67 Aligned_cols=39 Identities=15% Similarity=0.131 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHHCCCCEEEEEEEEC--CCCEEEEECCCCCC
Q ss_conf 3208999999973899999811973--48878970476554
Q T0570 41 QNSIRSLERASEIGAYGSEFDVHLT--ADNVLVVYHDNDIQ 79 (258)
Q Consensus 41 ENTl~af~~A~~~G~~~iE~DV~lT--kDg~~vv~HD~~l~ 79 (258)
+-|..++..|+..||++||+|++=- .||+|||.|-.|+.
T Consensus 339 ~ss~e~Y~~aL~~GcRcvElD~wdg~~~d~ePvv~HG~tlt 379 (799)
T 2zkm_X 339 LSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMT 379 (799)
T ss_dssp CBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSC
T ss_pred CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCC
T ss_conf 77699999999809978999820798889985881177576
No 16
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, X-RAY analysis, stability, calorimetry lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.44 E-value=0.035 Score=31.48 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=31.4
Q ss_pred HHHHHHHHHC-CCEEEE-EECCCHHHHHHHHHCCCCEEEECC
Q ss_conf 8899999973-997999-616998999999975899887086
Q T0570 206 PDWVKDCKVL-GMTSNV-WTVDDPKLMEEMIDMGVDFITTDL 245 (258)
Q Consensus 206 ~~~v~~~~~~-g~~v~~-wTvn~~~~~~~~~~~GVdgI~TD~ 245 (258)
.+.++++++. .+++.+ +.|.++++.+++++.|+||++.--
T Consensus 180 ~~~i~~ik~~t~~Pv~vGFGIs~~e~v~~~~~~~ADGVIVGS 221 (248)
T 1geq_A 180 YDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGS 221 (248)
T ss_dssp HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECH
T ss_conf 899999985258973888154999999999864899999888
No 17
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol- phosphate, lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=96.19 E-value=0.012 Score=34.32 Aligned_cols=193 Identities=17% Similarity=0.170 Sum_probs=87.1
Q ss_pred CCCCEEEEECCCCCCCCCC--CCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 6673799813788878886--32089999999738999998119734887897047655434232378888767640677
Q T0570 22 KDNTKVIAHRGYWKTEGSA--QNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQLSNG 99 (258)
Q Consensus 22 ~~~~~iiaHRG~~~~~~~p--ENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~~~~g 99 (258)
++++..|+|= ..+|| |-|+..++...+.|+|.||+.+=. -|+.-|+..|++-+ .+++.. |
T Consensus 15 ~~~~ali~yi----~aG~P~~~~~~~~l~~l~~~G~D~iEiGiPf---------SDP~aDGpvIq~a~---~rAl~~--g 76 (262)
T 1rd5_A 15 KGKTAFIPYI----TAGDPDLATTAEALRLLDGCGADVIELGVPC---------SDPYIDGPIIQASV---ARALAS--G 76 (262)
T ss_dssp TTCCEEEEEE----ETTSSCHHHHHHHHHHHHHTTCSSEEEECCC---------SCCTTSCHHHHHHH---HHHHTT--T
T ss_pred CCCCEEEEEE----ECCCCCHHHHHHHHHHHHHCCCCEEEECCCC---------CCCCCCCCCEEEEE---EECCCC--C
T ss_conf 5996799997----2778997899999999997599999967887---------76555677256531---324356--7
Q ss_pred CCCCCHHHHHHHHHHC---CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-E-CC--HHHHHHHHHHHCC
Q ss_conf 7898889999998704---99189985267776532158999999999974125874898-4-79--8999999997334
Q T0570 100 EKLPTLEQYLKRAKKL---KNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYI-S-FN--MDACKEFIRLCPK 172 (258)
Q Consensus 100 ~~iptL~evl~~~~~~---~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~-S-f~--~~~l~~~~~~~p~ 172 (258)
.+++++++.+++. .+..+.+=. . .+.. ....++..++.+... +++- . +. .+....+++. +
T Consensus 77 ---~~~~~~~~~~~~~~~~~~~~~ilm~--y----~n~~-~~~~~~~~~~~GvdG-viipDlp~ee~~~~~~~~~~~--~ 143 (262)
T 1rd5_A 77 ---TTMDAVLEMLREVTPELSCPVVLLS--Y----YKPI-MFRSLAKMKEAGVHG-LIVPDLPYVAAHSLWSEAKNN--N 143 (262)
T ss_dssp ---CCHHHHHHHHHHHGGGCSSCEEEEC--C----SHHH-HSCCTHHHHHTTCCE-EECTTCBTTTHHHHHHHHHHT--T
T ss_pred ---CCHHHHHHHHHHHCCCCCCCCEEEE--C----CCCC-HHHHHHHHHHCCCEE-EECCCCHHHHHHHHHHHHHHH--C
T ss_conf ---0005667665431013467603442--1----1562-167777776258204-422576056677888887510--4
Q ss_pred CCEE-EEECCCCHHHHHHCCC--EEECCC----------HHHHHCCHHHHHHHHHC-CCEEEE-EECCCHHHHHHHHHCC
Q ss_conf 8189-8742679788985286--030345----------23320698899999973-997999-6169989999999758
Q T0570 173 SEVS-YLNGELSPMELKELGF--TGLDYH----------YKVLQSHPDWVKDCKVL-GMTSNV-WTVDDPKLMEEMIDMG 237 (258)
Q Consensus 173 ~~~~-~l~~~~~~~~~~~~~~--~~~~~~----------~~~~~~~~~~v~~~~~~-g~~v~~-wTvn~~~~~~~~~~~G 237 (258)
+... ++....++..++.+.. .+..|. ........++++++++. .+++.+ +.|.++++.+++.+.|
T Consensus 144 l~~I~lvaPtt~~~ri~~i~~~a~gfIY~vs~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~v~~~~~~g 223 (262)
T 1rd5_A 144 LELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWG 223 (262)
T ss_dssp CEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT
T ss_pred CCEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC
T ss_conf 34001016777187888763269862786303464221221210278899987513688779992789999999998549
Q ss_pred CCEEEECC
Q ss_conf 99887086
Q T0570 238 VDFITTDL 245 (258)
Q Consensus 238 VdgI~TD~ 245 (258)
+||++.--
T Consensus 224 ADGvVVGS 231 (262)
T 1rd5_A 224 ADGVIIGS 231 (262)
T ss_dssp CSEEEECH
T ss_pred CCEEEECH
T ss_conf 99999888
No 18
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=94.99 E-value=0.16 Score=27.49 Aligned_cols=94 Identities=21% Similarity=0.182 Sum_probs=54.5
Q ss_pred CEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEE-CCCCEEEEECCCCCCCCC--CCCCCHHHHHHHHCCCCCC
Q ss_conf 3799813788878886320899999997389999981197-348878970476554342--3237888876764067778
Q T0570 25 TKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHL-TADNVLVVYHDNDIQGKH--IQSCTYDELKDLQLSNGEK 101 (258)
Q Consensus 25 ~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~l-TkDg~~vv~HD~~l~r~~--v~~~t~~el~~l~~~~g~~ 101 (258)
+.|-+|--+. -.+..++..+++.|++++|+||+- ...|.+-+.|+..+.... ..-++..++ ..+..
T Consensus 32 T~vgtHNSY~------~~~~~~~~~qLd~GvR~LElDv~~~~~~~~~~v~H~~~~~~~~~c~~~~~~~~l-----~~~~~ 100 (339)
T 3h4x_A 32 TSVGVHNAYE------KEKYRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGNNSNCEGAANASEL-----RTKSR 100 (339)
T ss_dssp EEEEETTTTC------TTTCSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSCCSSCCCCSSGGGT-----TCSCC
T ss_pred EEEEECCCCC------CCCCHHHHHHHHHCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC-----CCCCC
T ss_conf 1786146876------455338999998387069997224888994565067620124676544420222-----23667
Q ss_pred CCCHHHHHH----HHHHCCC---CEEEEEECCCCC
Q ss_conf 988899999----9870499---189985267776
Q T0570 102 LPTLEQYLK----RAKKLKN---IRLIFELKSHDT 129 (258)
Q Consensus 102 iptL~evl~----~~~~~~~---~~l~ieiK~~~~ 129 (258)
..+|++.|+ |....|+ +.+.+|.|....
T Consensus 101 ~~~l~d~L~~Ik~W~~anP~~vpi~I~~e~kd~~~ 135 (339)
T 3h4x_A 101 DQDFAGCLSDMRAWHDAHPGHRPILLKIEMKDGFN 135 (339)
T ss_dssp CCCHHHHHHHHHHHHHHSTTCCCEEEEEEETTCCB
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
T ss_conf 53599999999999986988651899983577777
No 19
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=94.52 E-value=0.22 Score=26.80 Aligned_cols=40 Identities=8% Similarity=0.137 Sum_probs=32.0
Q ss_pred CHHHHHHHHHC-CCEEEE-EECCCHHHHHHHHHCCCCEEEEC
Q ss_conf 98899999973-997999-61699899999997589988708
Q T0570 205 HPDWVKDCKVL-GMTSNV-WTVDDPKLMEEMIDMGVDFITTD 244 (258)
Q Consensus 205 ~~~~v~~~~~~-g~~v~~-wTvn~~~~~~~~~~~GVdgI~TD 244 (258)
..++++++++. ++++.+ +.|.++++.++.++.|+|||+.-
T Consensus 193 ~~~~i~~vk~~t~~Pv~vGFGI~~~e~v~~~~~~~aDGvVVG 234 (268)
T 1qop_A 193 LHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp CHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEC
T ss_conf 899999998737897489832598999999986389999987
No 20
>1vkf_A Glycerol uptake operon antiterminator-related protein; TM1436, structural genomics, JCSG, PSI, protein structure initiative; HET: CIT; 1.65A {Thermotoga maritima MSB8} SCOP: c.1.29.1
Probab=93.26 E-value=0.33 Score=25.69 Aligned_cols=135 Identities=14% Similarity=0.090 Sum_probs=77.3
Q ss_pred CCCCHHHHHHHHHHCCC-CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH-CCCCEEEE
Q ss_conf 89888999999870499-18998526777653215899999999997412587489847989999999973-34818987
Q T0570 101 KLPTLEQYLKRAKKLKN-IRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLC-PKSEVSYL 178 (258)
Q Consensus 101 ~iptL~evl~~~~~~~~-~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~-p~~~~~~l 178 (258)
.|..|.++++.+++... +.+.+|+= ++-...... ++.+++++. -=+.|-....+++.++.. ..+.+.|+
T Consensus 41 ~I~~L~~iv~~~k~~gK~vfVHiDLI--~GL~~D~~a----vefLk~~~~---dGIISTk~~~I~~Ak~~Gl~tIqRvFl 111 (188)
T 1vkf_A 41 DILNLKFHLKILKDRGKTVFVDMDFV--NGLGEGEEA----ILFVKKAGA---DGIITIKPKNYVVAKKNGIPAVLRFFA 111 (188)
T ss_dssp ETTTHHHHHHHHHHTTCEEEEEGGGE--ETCCSSHHH----HHHHHHHTC---SEEEESCHHHHHHHHHTTCCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEECC--CCCCCCHHH----HHHHHHCCC---CEEEECCHHHHHHHHHCCCEEEEEEEE
T ss_conf 48889999999998699899986516--777888799----999997599---999978899999999779928987654
Q ss_pred ECCCCHHH----HHHCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEE-ECCCHHHHHHHHHCCCCEEEECCHHHH
Q ss_conf 42679788----985286030345233206988999999739979996-169989999999758998870868999
Q T0570 179 NGELSPME----LKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVW-TVDDPKLMEEMIDMGVDFITTDLPEET 249 (258)
Q Consensus 179 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~TD~P~~~ 249 (258)
....+-.. .+..+.+.+..-+-.+ .|.++++. .+.++.+- -++++++...+++ |..+|.|-.+++.
T Consensus 112 iDS~al~~~~~~i~~~~PD~IEiLPG~i--~p~ii~~~--~~~piIAGGLI~~kedV~~aL~-~a~aVSTS~~~LW 182 (188)
T 1vkf_A 112 LDSKAVERGIEQIETLGVDVVEVLPGAV--APKVARKI--PGRTVIAAGLVETEEEAREILK-HVSAISTSSRILW 182 (188)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEESGGG--HHHHHTTS--TTSEEEEESCCCSHHHHHHHTT-TSSEEEECCHHHH
T ss_pred EEHHHHHHHHHHHHHCCCCEEEECCHHH--HHHHHHHC--CCCCEEEECCCCCHHHHHHHHH-CCCEEECCCHHHH
T ss_conf 5277899999998536999999865341--79999862--5992996367188999999996-6918988887894
No 21
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA; 2.00A {Aquifex aeolicus VF5}
Probab=92.39 E-value=0.5 Score=24.64 Aligned_cols=39 Identities=13% Similarity=0.191 Sum_probs=28.8
Q ss_pred CCCCEEEEECCCCCCCCCC--CCCHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 6673799813788878886--320899999997389999981197
Q T0570 22 KDNTKVIAHRGYWKTEGSA--QNSIRSLERASEIGAYGSEFDVHL 64 (258)
Q Consensus 22 ~~~~~iiaHRG~~~~~~~p--ENTl~af~~A~~~G~~~iE~DV~l 64 (258)
+++...|+|= ..+|| |.|+..++...+.|+|+||+-+=.
T Consensus 14 ~~~~ali~y~----t~G~P~~~~~~~~l~~l~~~G~D~iElGiPf 54 (262)
T 2ekc_A 14 KREKALVSYL----MVGYPDYETSLKAFKEVLKNGTDILEIGFPF 54 (262)
T ss_dssp HTBCEEEEEE----ETTSSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred CCCCEEEEEE----ECCCCCHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 5995699998----2827987999999999997699999977888
No 22
>3kts_A Glycerol uptake operon antiterminator regulatory protein; structural genomics, PSI-2, protein structure initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=90.99 E-value=0.71 Score=23.73 Aligned_cols=139 Identities=11% Similarity=0.051 Sum_probs=83.7
Q ss_pred CCCCHHHHHHHHHHCCCC-EEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH-CCCCEEEE
Q ss_conf 898889999998704991-8998526777653215899999999997412587489847989999999973-34818987
Q T0570 101 KLPTLEQYLKRAKKLKNI-RLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLC-PKSEVSYL 178 (258)
Q Consensus 101 ~iptL~evl~~~~~~~~~-~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~-p~~~~~~l 178 (258)
.|..|.++++.+++.... .+.+|+= ++-.... ..++.+++.--.+ =+.|-....+++.++.. ..+.+.|+
T Consensus 39 ~I~~l~~iv~~~k~~gK~vfVHiDLI--~GL~~d~----~av~fL~~~~~~d--GIISTk~~~I~~Ak~~Gl~tIqR~Fl 110 (192)
T 3kts_A 39 HVAQLKALVKYAQAGGKKVLLHADLV--NGLKNDD----YAIDFLCTEICPD--GIISTRGNAIMKAKQHKMLAIQRLFM 110 (192)
T ss_dssp ETTTHHHHHHHHHHTTCEEEEEGGGE--ETCCCSH----HHHHHHHHTTCCS--EEEESCHHHHHHHHHTTCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEECC--CCCCCCH----HHHHHHHHHCCCC--EEEECCHHHHHHHHHCCCEEEEEEEE
T ss_conf 18779999999998799899985316--7778888----9999999842899--89978899999999779907976634
Q ss_pred ECCCCHHH----HHHCCCEEECCCHHHHHCCHHHHHHHHH-CCCEEEEE-ECCCHHHHHHHHHCCCCEEEECCHHHHH
Q ss_conf 42679788----9852860303452332069889999997-39979996-1699899999997589988708689999
Q T0570 179 NGELSPME----LKELGFTGLDYHYKVLQSHPDWVKDCKV-LGMTSNVW-TVDDPKLMEEMIDMGVDFITTDLPEETQ 250 (258)
Q Consensus 179 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~TD~P~~~~ 250 (258)
....+-.. .+..+.+.+..-+- .-|..++++++ .+.++.+- -+.++++...+++.|+.+|.|-.+++..
T Consensus 111 iDS~al~~~~~~i~~~~PD~VEiLPG---~~p~~I~~i~~~~~~PiIAGGLI~~kedV~~aL~aGA~aVSTS~~~LW~ 185 (192)
T 3kts_A 111 IDSSAYNKGVALIQKVQPDCIELLPG---IIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp CSHHHHHHHHHHHHHHCCSEEEEECT---TCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred EEHHHHHHHHHHHHHCCCCEEEECCH---HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHC
T ss_conf 42768999999985479899998866---7899999999746999997667288999999998599799879978972
No 23
>3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A
Probab=89.05 E-value=0.99 Score=22.87 Aligned_cols=64 Identities=22% Similarity=0.173 Sum_probs=42.8
Q ss_pred HHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 99999973899999811973488789704765543423237888876764067778988899999987049918998526
Q T0570 46 SLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKKLKNIRLIFELK 125 (258)
Q Consensus 46 af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~~~~g~~iptL~evl~~~~~~~~~~l~ieiK 125 (258)
++..-+.+|+++++++|+...|+.+++.|-....+ .++++ .|+++.+.+...|+=.+.+++|
T Consensus 54 ~i~~QL~~GvR~lDirv~~~~~~~~~~~Hg~~~~~-----~~~~~-------------~l~~i~~fl~~np~EvVil~~~ 115 (298)
T 3ea1_A 54 DFRYQMDHGARIFDIRGRLTDDNTIVLHHGPLYLY-----VTLHE-------------FINEAKQFLKDNPSETIIMSLK 115 (298)
T ss_dssp CHHHHHHTTCCEEEEEEEECTTSCEEEEETTEEEE-----EEHHH-------------HHHHHHHHHHHCTTCCEEEEEE
T ss_pred CHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCC-----CCHHH-------------HHHHHHHHHHHCCCCEEEEEEE
T ss_conf 89999971992899984126898469994776689-----83899-------------9999999998699914999986
Q ss_pred CC
Q ss_conf 77
Q T0570 126 SH 127 (258)
Q Consensus 126 ~~ 127 (258)
..
T Consensus 116 ~~ 117 (298)
T 3ea1_A 116 KE 117 (298)
T ss_dssp EC
T ss_pred EC
T ss_conf 03
No 24
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus HB8} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=86.69 E-value=1.4 Score=21.91 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=29.2
Q ss_pred CCHHHHHHHHHC-CCEEEE-EECCCHHHHHHHHHCCCCEEEECC
Q ss_conf 698899999973-997999-616998999999975899887086
Q T0570 204 SHPDWVKDCKVL-GMTSNV-WTVDDPKLMEEMIDMGVDFITTDL 245 (258)
Q Consensus 204 ~~~~~v~~~~~~-g~~v~~-wTvn~~~~~~~~~~~GVdgI~TD~ 245 (258)
...++++++++. ++++.+ +.|+++++.+++ .++||++.--
T Consensus 189 ~~~~~i~~ik~~~~~Pv~vGFGI~~~~~~~~~--~~ADGvIVGS 230 (271)
T 1ujp_A 189 EVKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH--CCCCEEEECH
T ss_conf 68899888765136875875697988999874--6899899868
No 25
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=84.12 E-value=1.9 Score=21.18 Aligned_cols=54 Identities=22% Similarity=0.250 Sum_probs=40.2
Q ss_pred HHHHCCHHHHHHHHHCC-CEEEEE---ECCCHHHHHHHHHCCCCEEEE-------CCHHHHHHHH
Q ss_conf 33206988999999739-979996---169989999999758998870-------8689999999
Q T0570 200 KVLQSHPDWVKDCKVLG-MTSNVW---TVDDPKLMEEMIDMGVDFITT-------DLPEETQKIL 253 (258)
Q Consensus 200 ~~~~~~~~~v~~~~~~g-~~v~~w---Tvn~~~~~~~~~~~GVdgI~T-------D~P~~~~~~l 253 (258)
+.+...-+++.+.++.| ++|.-+ .|.+|++..-++.+|+|||+. ++|.+..+.+
T Consensus 190 k~~~ap~eLv~~v~~~GrLPVvnFAAGGIATPADAALMMqLG~DGVFVGSGIFKS~dP~~rA~AI 254 (305)
T 2nv1_A 190 KNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 254 (305)
T ss_dssp HHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH
T ss_conf 86098789999999978986377504787988889999974998799775402679989999999
No 26
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=84.09 E-value=1.5 Score=21.76 Aligned_cols=41 Identities=15% Similarity=0.201 Sum_probs=33.9
Q ss_pred HHHHHHHHHCCCEEEEEEC-----C-CHHHHHHHHHCCCCEEEECCH
Q ss_conf 8899999973997999616-----9-989999999758998870868
Q T0570 206 PDWVKDCKVLGMTSNVWTV-----D-DPKLMEEMIDMGVDFITTDLP 246 (258)
Q Consensus 206 ~~~v~~~~~~g~~v~~wTv-----n-~~~~~~~~~~~GVdgI~TD~P 246 (258)
+++++-+|..|+.+.+|.- + -...++++.++||+||=+|+.
T Consensus 350 ~~l~~Ya~skGv~i~l~~~~~~~~~~~~~~~~~~~~wGV~gvK~Df~ 396 (641)
T 3a24_A 350 KELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFM 396 (641)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 99999999769769999456653350999999998749768983786
No 27
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica}
Probab=81.25 E-value=2.5 Score=20.51 Aligned_cols=166 Identities=8% Similarity=-0.023 Sum_probs=86.8
Q ss_pred CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 66737998137888788863208999999973899999811973488789704765543423237888876764067778
Q T0570 22 KDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEK 101 (258)
Q Consensus 22 ~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~~~~g~~ 101 (258)
..+|.|-==|+. -+|+.++-.+...+.|...+|+-.+- + -.++.|+++.
T Consensus 11 ~~~piipVlr~~-----~~~~a~~~~~al~~~Gi~~iEitl~~----------~----------~a~~~I~~l~------ 59 (217)
T 3lab_A 11 NTKPLIPVIVID-----DLVHAIPMAKALVAGGVHLLEVTLRT----------E----------AGLAAISAIK------ 59 (217)
T ss_dssp TSCSEEEEECCS-----CGGGHHHHHHHHHHTTCCEEEEETTS----------T----------THHHHHHHHH------
T ss_pred HCCCEEEEEECC-----CHHHHHHHHHHHHHCCCCEEEEECCC----------C----------HHHHHHHHHH------
T ss_conf 379889999789-----99999999999998799889996899----------0----------4999999999------
Q ss_pred CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-ECCHHHHHHHHHHH-C-CCCEEEE
Q ss_conf 9888999999870499189985267776532158999999999974125874898-47989999999973-3-4818987
Q T0570 102 LPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYI-SFNMDACKEFIRLC-P-KSEVSYL 178 (258)
Q Consensus 102 iptL~evl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~-Sf~~~~l~~~~~~~-p-~~~~~~l 178 (258)
+++|++.+=. ..-.+.+.+ +...+.+ -+.+++ .++++.++..++.. | .....|+
T Consensus 60 -----------~~~p~~~iGa------GTV~~~~~~----~~a~~aG--a~FivSP~~~~~v~~~a~~~~ip~~~~~~~i 116 (217)
T 3lab_A 60 -----------KAVPEAIVGA------GTVCTADDF----QKAIDAG--AQFIVSPGLTPELIEKAKQVKLDGQWQGVFL 116 (217)
T ss_dssp -----------HHCTTSEEEE------ECCCSHHHH----HHHHHHT--CSEEEESSCCHHHHHHHHHHHHHCSCCCEEE
T ss_pred -----------HHCCCCEEEE------EECCCHHHH----HHHHHHC--CCEEECCCCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf -----------8689973989------972436899----9999748--9999989999999999998399843355453
Q ss_pred ECCCCHHHHH---HCCCEEECCCHHHHHCCHHHHHHHHH--CCCEEEEE-ECCCHHHHHHHHHCCCCEEE
Q ss_conf 4267978898---52860303452332069889999997--39979996-16998999999975899887
Q T0570 179 NGELSPMELK---ELGFTGLDYHYKVLQSHPDWVKDCKV--LGMTSNVW-TVDDPKLMEEMIDMGVDFIT 242 (258)
Q Consensus 179 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~--~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~ 242 (258)
-+..++.+.. +.++..+-+.+......+++++.++. .+.++.+= .|| .+.+.++++.|+.++.
T Consensus 117 PG~~TptEi~~A~~~Ga~~vK~FPA~~~gG~~yik~l~~p~p~i~~~ptGGV~-~~N~~~yl~~g~v~~~ 185 (217)
T 3lab_A 117 PGVATASEVMIAAQAGITQLKCFPASAIGGAKLLKAWSGPFPDIQFCPTGGIS-KDNYKEYLGLPNVICA 185 (217)
T ss_dssp EEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHSTTBCCE
T ss_pred CCCCCHHHHHHHHHCCCCEEEECCHHHCCCHHHHHHHHCCCCCCEEEEECCCC-HHHHHHHHHCCCEEEE
T ss_conf 78598899999998799979965043137899999974579998388537999-8999999968982999
No 28
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus HB8} PDB: 2iss_A*
Probab=79.89 E-value=2.7 Score=20.24 Aligned_cols=55 Identities=16% Similarity=0.217 Sum_probs=41.1
Q ss_pred HHHHCCHHHHHHHHHCC-CEEEEEE---CCCHHHHHHHHHCCCCEEEEC-------CHHHHHHHHH
Q ss_conf 33206988999999739-9799961---699899999997589988708-------6899999998
Q T0570 200 KVLQSHPDWVKDCKVLG-MTSNVWT---VDDPKLMEEMIDMGVDFITTD-------LPEETQKILH 254 (258)
Q Consensus 200 ~~~~~~~~~v~~~~~~g-~~v~~wT---vn~~~~~~~~~~~GVdgI~TD-------~P~~~~~~l~ 254 (258)
+.+....++++..++.| ++|..+. |.+|++...++.+|+|||+.. +|.+..+.+.
T Consensus 190 k~i~aP~eLv~~v~e~grLPVVnfAAGGIaTPADAAlmMqLG~DGVfVgSgIfks~dP~kmA~Aiv 255 (297)
T 2zbt_A 190 KEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIV 255 (297)
T ss_dssp HHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECHHHCCCCCHHHHHHHHH
T ss_conf 874897999999999689986986677779878999999759988997514305899899999999
No 29
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomics, NPPSFA; 2.30A {Methanocaldococcus jannaschii DSM2661}
Probab=78.15 E-value=3.1 Score=19.91 Aligned_cols=53 Identities=19% Similarity=0.290 Sum_probs=39.4
Q ss_pred HHHCCHHHHHHHHHCC-CEEEEE---ECCCHHHHHHHHHCCCCEEEEC-------CHHHHHHHH
Q ss_conf 3206988999999739-979996---1699899999997589988708-------689999999
Q T0570 201 VLQSHPDWVKDCKVLG-MTSNVW---TVDDPKLMEEMIDMGVDFITTD-------LPEETQKIL 253 (258)
Q Consensus 201 ~~~~~~~~v~~~~~~g-~~v~~w---Tvn~~~~~~~~~~~GVdgI~TD-------~P~~~~~~l 253 (258)
.+....++++..++.| ++|..+ .|.+|++...++.+|+|||+.. +|.+..+.+
T Consensus 224 ~i~a~~eLv~~v~e~grLPVVnFAaGGIaTPADAALmMqLGaDGVFVGSGIFkS~dP~k~ArAI 287 (330)
T 2yzr_A 224 IIDGLYEVLLEVKKLGRLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAI 287 (330)
T ss_dssp HHHHHHHHHHHHHHHTSCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH
T ss_conf 1134489999999838897377545787988999999855987799742001589989999999
No 30
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, X-RAY diffraction, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=77.82 E-value=3.2 Score=19.86 Aligned_cols=139 Identities=13% Similarity=0.166 Sum_probs=79.4
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEEECCCCC---CCCCHHHHHHHHHHHHHHCCCCCEEEE-----ECCHHHHHHHHHHH
Q ss_conf 7789888999999870499189985267776---532158999999999974125874898-----47989999999973
Q T0570 99 GEKLPTLEQYLKRAKKLKNIRLIFELKSHDT---PERNRDAARLSVQMVKRMKLAKRTDYI-----SFNMDACKEFIRLC 170 (258)
Q Consensus 99 g~~iptL~evl~~~~~~~~~~l~ieiK~~~~---~~~~~~~~~~~~~~i~~~~~~~~viv~-----Sf~~~~l~~~~~~~ 170 (258)
..+.|.|.+.+ .+ +++.+.-|+|-... .-.+.+..+ ++..+.+.+...-.+.. ..+.+.+...++..
T Consensus 31 ~~~~~~f~~aL---~~-~~~~vIAEiKraSPS~G~i~~~dp~~-~A~~y~~~GA~aiSVLTe~~~F~Gs~~dl~~v~~~~ 105 (254)
T 1vc4_A 31 PPSVPSFKEAL---LR-PGLSVIAEVKRQSPSEGLIREVDPVE-AALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAV 105 (254)
T ss_dssp CCCCCCHHHHH---TS-SSCEEEEEECSCCTTTCCCCSCCHHH-HHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHC
T ss_pred CCCCCCHHHHH---HC-CCCEEEEEEEECCCCCCCCCCCCHHH-HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHC
T ss_conf 99984699997---06-89848988620487767656699999-999998458867999757663445689999999870
Q ss_pred CCCCEEEEECCCCHHH---HHHCCCEEECCCHHHHHC-CHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEEC
Q ss_conf 3481898742679788---985286030345233206-9889999997399799961699899999997589988708
Q T0570 171 PKSEVSYLNGELSPME---LKELGFTGLDYHYKVLQS-HPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFITTD 244 (258)
Q Consensus 171 p~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI~TD 244 (258)
++|+..=.....+.+ .+.++++++-.-...+.. ..++++.++..|+.+.+= |.+.+++.+..+.|++.|--|
T Consensus 106 -~~PvLrKDFIid~~QI~ea~~~GADavLLI~all~~~l~~l~~~A~~lGle~LVE-vh~~~El~~a~~~~a~iIGIN 181 (254)
T 1vc4_A 106 -DLPLLRKDFVVDPFMLEEARAFGASAALLIVALLGELTGAYLEEARRLGLEALVE-VHTERELEIALEAGAEVLGIN 181 (254)
T ss_dssp -CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEE-ECSHHHHHHHHHHTCSEEEEE
T ss_pred -CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE-EECHHHHHHHHCCCCCEEEEE
T ss_conf -8871137751569999898760523899999998777899999999838822655-512866302115898689995
No 31
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=77.30 E-value=2.8 Score=20.21 Aligned_cols=40 Identities=8% Similarity=0.091 Sum_probs=29.2
Q ss_pred HHHHHHHH-CCCEEEEE-ECCCHHHHHHHHHCCCCEEEECCH
Q ss_conf 89999997-39979996-169989999999758998870868
Q T0570 207 DWVKDCKV-LGMTSNVW-TVDDPKLMEEMIDMGVDFITTDLP 246 (258)
Q Consensus 207 ~~v~~~~~-~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~TD~P 246 (258)
.+++++.+ ..++|.+. -+.+.+++..++.+|+|||.-..+
T Consensus 152 ~Lv~~v~~~~~iPvIaaGGI~~~~~~aaalalGAdgV~vGT~ 193 (332)
T 2z6i_A 152 TLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTR 193 (332)
T ss_dssp HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCE
T ss_conf 999999996289889868989999999999958694031651
No 32
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=72.66 E-value=4.3 Score=19.05 Aligned_cols=23 Identities=13% Similarity=0.134 Sum_probs=17.5
Q ss_pred CCCCHHHHHHHHHCCCCEEEEEE
Q ss_conf 63208999999973899999811
Q T0570 40 AQNSIRSLERASEIGAYGSEFDV 62 (258)
Q Consensus 40 pENTl~af~~A~~~G~~~iE~DV 62 (258)
+|.-++-.+..++.|...||+-.
T Consensus 28 ~~~a~~~~~al~~~Gi~~iEITl 50 (224)
T 1vhc_A 28 ADDILPLADTLAKNGLSVAEITF 50 (224)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEET
T ss_pred HHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 99999999999987999899967
No 33
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=71.54 E-value=4.6 Score=18.90 Aligned_cols=161 Identities=14% Similarity=0.089 Sum_probs=66.5
Q ss_pred CCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCHHHHHHHHHHC-
Q ss_conf 8863208999999973899999811973488789704765543423237888876764-06777898889999998704-
Q T0570 38 GSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQ-LSNGEKLPTLEQYLKRAKKL- 115 (258)
Q Consensus 38 ~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~-~~~g~~iptL~evl~~~~~~- 115 (258)
.+| |=+.+-..|.+.|+|+|=+ |-. -||+.+.+-....|+... ..-+-.+..-+|.++.+.+.
T Consensus 23 ~~P-d~~~~A~~~~~~GadgITv-------------HlR-~DrRHI~~~Dv~~l~~~~~~~lNlE~~~~~e~~~ia~~~k 87 (243)
T 1m5w_A 23 AYP-DPVQAAFIAEQAGADGITV-------------HLR-EDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETK 87 (243)
T ss_dssp CCS-CHHHHHHHHHTTTCSEEEE-------------ECC-TTCSSSCHHHHHHHHHHCSSEEEEEECSSHHHHHHHHHHC
T ss_pred CCC-CHHHHHHHHHHCCCCEEEE-------------CCC-CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
T ss_conf 998-9999999999839985894-------------468-8765441589999998655665226777488998998769
Q ss_pred CC-CEEEEEEC----CCCCC--CCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHH
Q ss_conf 99-18998526----77765--3215899999999997412587489847989999999973348189874267978898
Q T0570 116 KN-IRLIFELK----SHDTP--ERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELK 188 (258)
Q Consensus 116 ~~-~~l~ieiK----~~~~~--~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~ 188 (258)
|+ +.|+-|-. ++.+. .........+++.+++.+. .-.+|.-.+.+.+...++...+.--.| ++.. .
T Consensus 88 P~qvtLVPe~r~elTTegGld~~~~~~~L~~~i~~lk~~gi-rvSLFiDPd~~~i~~A~~~Gad~IElh-TG~y-----a 160 (243)
T 1m5w_A 88 PHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGI-QVSLFIDADEEQIKAAAEVGAPFIEIH-TGCY-----A 160 (243)
T ss_dssp CSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHHTTCSEEEEE-CHHH-----H
T ss_pred CCEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCC-EEEEEECCCHHHHHHHHHCCCCEEEEC-CHHH-----H
T ss_conf 98789767887755877745320338899999999986597-079983688899999997099957510-0021-----1
Q ss_pred HCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEE
Q ss_conf 5286030345233206988999999739979996
Q T0570 189 ELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVW 222 (258)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~w 222 (258)
..... .-....+..-.+....+++.|+.|.+-
T Consensus 161 ~a~~~--~~~~~~l~~~~~aa~~A~~lGL~VnAG 192 (243)
T 1m5w_A 161 DAKTD--AEQAQELARIAKAATFAASLGLKVNAG 192 (243)
T ss_dssp HCCSH--HHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCC--HHHHHHHHHHHHHHHHHHHCCCCEECC
T ss_conf 32332--025789999999999998669844379
No 34
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=69.27 E-value=5.2 Score=18.60 Aligned_cols=38 Identities=11% Similarity=0.148 Sum_probs=27.1
Q ss_pred HHHHHHHH-CCCEEEEE-ECCCHHHHHHHHHCCCCEEEEC
Q ss_conf 89999997-39979996-1699899999997589988708
Q T0570 207 DWVKDCKV-LGMTSNVW-TVDDPKLMEEMIDMGVDFITTD 244 (258)
Q Consensus 207 ~~v~~~~~-~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~TD 244 (258)
.++.++.+ .+.+|.+- -+-+.+++..++.+|+|||...
T Consensus 166 ~Ll~~v~~~~~iPvIaaGGI~~g~~iaaaLalGAdgV~~G 205 (326)
T 3bo9_A 166 VLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCEEEEC
T ss_conf 8999999974896796689899999999997498874423
No 35
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=66.87 E-value=5.8 Score=18.31 Aligned_cols=161 Identities=13% Similarity=0.100 Sum_probs=67.7
Q ss_pred CCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHC-CCCCCCCCHHHHHHHHHHC-
Q ss_conf 88632089999999738999998119734887897047655434232378888767640-6777898889999998704-
Q T0570 38 GSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQL-SNGEKLPTLEQYLKRAKKL- 115 (258)
Q Consensus 38 ~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~~-~~g~~iptL~evl~~~~~~- 115 (258)
.+| |-+.+-..|.+.|+|+|=+ |-. -||+.|.+-....|++..- .-+=.+..-+|.++.+.+.
T Consensus 51 ~~P-d~~~aA~~~~~~GAdgITv-------------HlR-eDrRHI~d~Dv~~l~~~~~~~lNlE~a~~~e~i~ia~~~k 115 (278)
T 3gk0_A 51 AYP-DPVRAALAAEDAGADAITL-------------HLR-EDRRHIVDADVRTLRPRVKTRMNLECAVTPEMLDIACEIR 115 (278)
T ss_dssp SCS-CHHHHHHHHHHTTCSEEEE-------------ECC-TTCSSSCHHHHHHHHHHCSSCEEEEECSSHHHHHHHHHHC
T ss_pred CCC-CHHHHHHHHHHCCCCEEEE-------------CCC-CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 999-9999999999829986895-------------368-8756566899999998737865778898199999999769
Q ss_pred CC-CEEEEEEC----CCCCC--CCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHH
Q ss_conf 99-18998526----77765--3215899999999997412587489847989999999973348189874267978898
Q T0570 116 KN-IRLIFELK----SHDTP--ERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELK 188 (258)
Q Consensus 116 ~~-~~l~ieiK----~~~~~--~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~ 188 (258)
|+ +.|+-|-. ++.+. .........+++.+++.+. +-.+|.-.+.+.+...++...+.--.| ++.. .
T Consensus 116 P~qvtLVPEkr~ElTTegGldv~~~~~~L~~~i~~Lk~~gI-rvSLFIDPd~~qi~~A~~~Gad~IELh-TG~Y-----A 188 (278)
T 3gk0_A 116 PHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGV-RVSLFIDPDEAQIRAAHETGAPVIELH-TGRY-----A 188 (278)
T ss_dssp CSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHHHTCSEEEEC-CHHH-----H
T ss_pred CCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCC-CEEEEECCCHHHHHHHHHHCCCEEEEC-CHHH-----H
T ss_conf 98899887885543555766323019999999999997498-179983698899999987187848620-2777-----6
Q ss_pred HCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEE
Q ss_conf 5286030345233206988999999739979996
Q T0570 189 ELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVW 222 (258)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~w 222 (258)
... ..-... ..+..-.+..+.+++.|+.|.+-
T Consensus 189 ~a~-~~~~~~-~el~~i~~aa~~A~~lGL~VnAG 220 (278)
T 3gk0_A 189 DAH-DAAEQQ-REFERIATGVDAGIALGLKVNAG 220 (278)
T ss_dssp TCS-SHHHHH-HHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHC-CCHHHH-HHHHHHHHHHHHHHHCCCEEECC
T ss_conf 532-220366-89999999999998729857457
No 36
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=65.68 E-value=6.1 Score=18.16 Aligned_cols=41 Identities=12% Similarity=0.089 Sum_probs=33.4
Q ss_pred HHHHHHHHHCCCEEEEEEC------CC----HHHHHHHHHCCCCEEEECCH
Q ss_conf 8899999973997999616------99----89999999758998870868
Q T0570 206 PDWVKDCKVLGMTSNVWTV------DD----PKLMEEMIDMGVDFITTDLP 246 (258)
Q Consensus 206 ~~~v~~~~~~g~~v~~wTv------n~----~~~~~~~~~~GVdgI~TD~P 246 (258)
+++++-+++.|..+++|.- |. .+.+.++.++||.||=+|+.
T Consensus 421 ~eLv~YAk~KgV~i~lw~~~~~~~~~~~~~~d~~f~~~~~~Gv~GvKvdF~ 471 (738)
T 2d73_A 421 KEIHRYAARKGIKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYV 471 (738)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTBHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCHHHEEECCE
T ss_conf 999999985797699996687631218999999999998848155142403
No 37
>3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503}
Probab=62.98 E-value=6.9 Score=17.86 Aligned_cols=145 Identities=16% Similarity=0.166 Sum_probs=81.1
Q ss_pred CCCCCCHHHHHHHHHCCCCEEEEEEEE--CCCC--EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCC---CCCCHHHHHH
Q ss_conf 886320899999997389999981197--3488--78970476554342323788887676406777---8988899999
Q T0570 38 GSAQNSIRSLERASEIGAYGSEFDVHL--TADN--VLVVYHDNDIQGKHIQSCTYDELKDLQLSNGE---KLPTLEQYLK 110 (258)
Q Consensus 38 ~~pENTl~af~~A~~~G~~~iE~DV~l--TkDg--~~vv~HD~~l~r~~v~~~t~~el~~l~~~~g~---~iptL~evl~ 110 (258)
+--|-=-++|..|.+.|++.|-+|-.. -.+| .=-+.++--+. ..| ....+. .-+-|.++|+
T Consensus 34 epFaDLD~aF~eaveRGyNtiRIcAmP~LLf~~~~~~~ll~~~~~~------~~~------g~~~~~evd~r~~L~~lf~ 101 (393)
T 3gyc_A 34 AGYEDWDQVLDELSERGYNAIRIDAYPHLIAENPMKKWLLKEVWNQ------QDW------GSPDMNEVQVQPNLNLFLS 101 (393)
T ss_dssp SSCSCHHHHHHHHHHTTCCEEEEECCHHHHHHCTTCCEEECCSCSS------SSS------SCSSCEEECCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCHHHHCCCC------CCC------CCCCCCCHHHHHHHHHHHH
T ss_conf 8625699999999970666466425440230488765166640345------767------8998741136899999999
Q ss_pred HHHHCCCCEEEEEEC----CCC------CCCCCHHHHHHHHHHHHHHCCCCCEEEEECC---------------------
Q ss_conf 987049918998526----777------6532158999999999974125874898479---------------------
Q T0570 111 RAKKLKNIRLIFELK----SHD------TPERNRDAARLSVQMVKRMKLAKRTDYISFN--------------------- 159 (258)
Q Consensus 111 ~~~~~~~~~l~ieiK----~~~------~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~--------------------- 159 (258)
.++. .++.+.+--= ++. .++........+++++.+.++.+++-+--++
T Consensus 102 aA~~-~d~~Vi~SSWe~~d~~a~~~~l~rpE~la~a~a~ll~fl~e~GL~driA~VElhNEv~~~~la~~~~~~lPa~~~ 180 (393)
T 3gyc_A 102 KCKE-RDIKVGLSSWYRLDVDEVCLKLDTPEKLADCWLTILRSIEEDGLLDTILYVDLCNEWPGDSWAPFFAKTYPNVGW 180 (393)
T ss_dssp HHHH-TTCEEEEECCCCCBTTCGGGGCCSHHHHHHHHHHHHHHHHHTTCGGGEEEEESSTTTTCTTTCHHHHTTCTTTCT
T ss_pred HHHH-CCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 9876-596899633345555555540379999999999999999970530132456632235577666430014852225
Q ss_pred ------------HHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCEEE
Q ss_conf ------------899999999733481898742679788985286030
Q T0570 160 ------------MDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGL 195 (258)
Q Consensus 160 ------------~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~ 195 (258)
.+.+.++++..|++++++.........+.+......
T Consensus 181 g~~~~e~~~~~le~~~~~lra~hP~~pv~~sy~~~~~~~~~~~dv~~~ 228 (393)
T 3gyc_A 181 GNWYKEESLRWMKTSLEKMRQVYPDMPFLYSFDHGDVKKYEEVDCSFL 228 (393)
T ss_dssp TCTTSHHHHHHHHHHHHHHHTTCTTSCEECCBCCSCTTHHHHSCCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 535556658899999999997689981342225566766555686433
No 38
>1a53_A IGPS, indole-3-glycerolphosphate synthase; thermostable, TIM-barrel; HET: IGP; 2.00A {Sulfolobus solfataricus} SCOP: c.1.2.4 PDB: 1lbf_A* 1lbl_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 2c3z_A 3b5v_A
Probab=62.18 E-value=7.1 Score=17.77 Aligned_cols=82 Identities=12% Similarity=0.194 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHCCCCEEEEECCCCHHH---HHHCCCEEECCCHHHHH--CCHHHHHHHHHCCCEEEEEECCCHHHHHHH
Q ss_conf 9899999999733481898742679788---98528603034523320--698899999973997999616998999999
Q T0570 159 NMDACKEFIRLCPKSEVSYLNGELSPME---LKELGFTGLDYHYKVLQ--SHPDWVKDCKVLGMTSNVWTVDDPKLMEEM 233 (258)
Q Consensus 159 ~~~~l~~~~~~~p~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~ 233 (258)
+.+.+..+++.. +.|+..=.....+.+ .+.++++++-.-...+. .-+++++.++..|+.+.+ -|.+.+++.+.
T Consensus 91 s~~dL~~v~~~v-~~PiLrKDFIid~~QI~ea~~~GADavLLI~~~L~~~~L~~l~~~a~~lgl~~Lv-EVh~~~El~ra 168 (247)
T 1a53_A 91 SYETLRKIASSV-SIPILMKDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLI-EINDENDLDIA 168 (247)
T ss_dssp CHHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHTTTCCCEE-EECSHHHHHHH
T ss_pred CHHHHHHHHHHC-CCCEEECCCCCCHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHHHHHHHHCCEEEE-EECCHHHHHHH
T ss_conf 889999999856-8861303456889999999982776110224203188889999999984995688-74799999999
Q ss_pred HHCCCCEEE
Q ss_conf 975899887
Q T0570 234 IDMGVDFIT 242 (258)
Q Consensus 234 ~~~GVdgI~ 242 (258)
...|++.|-
T Consensus 169 ~~~~a~iIG 177 (247)
T 1a53_A 169 LRIGARFIG 177 (247)
T ss_dssp HHTTCSEEE
T ss_pred HCCCCCEEE
T ss_conf 806988588
No 39
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=61.59 E-value=7.3 Score=17.71 Aligned_cols=34 Identities=6% Similarity=-0.097 Sum_probs=21.4
Q ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEE
Q ss_conf 737998137888788863208999999973899999811
Q T0570 24 NTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDV 62 (258)
Q Consensus 24 ~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV 62 (258)
.|.|-==|+ .-||.-++-.++.++.|...+|+-.
T Consensus 16 ~~iipvlr~-----~~~~~a~~~~~al~~~Gi~~iEItl 49 (214)
T 1wbh_A 16 GPVVPVIVV-----KKLEHAVPMAKALVAGGVRVLNVTL 49 (214)
T ss_dssp CSEEEEECC-----SSGGGHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEEEC-----CCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 998999978-----9999999999999987998899947
No 40
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta- barrel, lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=60.59 E-value=7.6 Score=17.60 Aligned_cols=22 Identities=9% Similarity=0.071 Sum_probs=11.8
Q ss_pred CCCHHHHHHHHHCCCCEEEEEE
Q ss_conf 3208999999973899999811
Q T0570 41 QNSIRSLERASEIGAYGSEFDV 62 (258)
Q Consensus 41 ENTl~af~~A~~~G~~~iE~DV 62 (258)
|--++-.+..++.|.+.+|+-.
T Consensus 38 ~~a~~~a~al~~~Gi~~iEitl 59 (225)
T 1mxs_A 38 EDILPLADALAAGGIRTLEVTL 59 (225)
T ss_dssp GGHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHHHCCCCEEEEEC
T ss_conf 9999999999986998899958
No 41
>3bic_A Methylmalonyl-COA mutase, mitochondrial precursor; organic aciduria, methylmalonyl COA mutase deficiency, metabolic disease, structural genomics; 2.60A {Homo sapiens}
Probab=59.11 E-value=8.1 Score=17.45 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=38.7
Q ss_pred HHHCCHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHCCCCEEEE---CCHHHHHHHHH
Q ss_conf 32069889999997399---79996169989999999758998870---86899999998
Q T0570 201 VLQSHPDWVKDCKVLGM---TSNVWTVDDPKLMEEMIDMGVDFITT---DLPEETQKILH 254 (258)
Q Consensus 201 ~~~~~~~~v~~~~~~g~---~v~~wTvn~~~~~~~~~~~GVdgI~T---D~P~~~~~~l~ 254 (258)
....-|++++.++++|. .|++-.+--++++..+...|||+|++ .-++-+.++|+
T Consensus 668 ~~~~vp~l~~~Lk~~G~~dI~VvvGG~~P~~d~~~l~~aGv~~~~~~g~~v~~~~~~~l~ 727 (762)
T 3bic_A 668 HKTLVPELIKELNSLGRPDILVMCGGVIPPQDYEFLFEVGVSNVFGPGTRIPKAAVQVLD 727 (762)
T ss_dssp HHHHHHHHHHHHHHHTCTTSEEEEEESCCGGGHHHHHHHTCCEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHH
T ss_conf 699999999999966997767998078885769999977978784898928999999999
No 42
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus CMCP6} PDB: 2plk_A*
Probab=57.86 E-value=8.5 Score=17.32 Aligned_cols=11 Identities=9% Similarity=0.193 Sum_probs=4.0
Q ss_pred HHHHHHCCCEE
Q ss_conf 99999739979
Q T0570 209 VKDCKVLGMTS 219 (258)
Q Consensus 209 v~~~~~~g~~v 219 (258)
++.++..|+.+
T Consensus 198 ~~~~~~~~l~~ 208 (419)
T 2plj_A 198 IETAKEWNIRI 208 (419)
T ss_dssp HHHHHHTTCEE
T ss_pred HHHHHHCCCCE
T ss_conf 99998679976
No 43
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=57.56 E-value=7.7 Score=17.56 Aligned_cols=187 Identities=13% Similarity=0.119 Sum_probs=87.0
Q ss_pred CCCCCCCCHHHHHHHH-HCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHC-CCCCCCCCHHHHHHHHH
Q ss_conf 7888632089999999-738999998119734887897047655434232378888767640-67778988899999987
Q T0570 36 TEGSAQNSIRSLERAS-EIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQL-SNGEKLPTLEQYLKRAK 113 (258)
Q Consensus 36 ~~~~pENTl~af~~A~-~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~~-~~g~~iptL~evl~~~~ 113 (258)
++.|| |..-+.+|+ ..|+..|-+-+++..- .+.. . ...+..++.++. .+.-...+-+|.+...+
T Consensus 19 Tgky~--s~~~~~~ai~aSGaeiVTVAlRR~~~------~~~~----~--~~~~~~~~~~~~LPNTAGc~~a~eAv~~a~ 84 (268)
T 2htm_A 19 SGKYE--DFGVMREAIAAAKAEVVTVSVRRVEL------KAPG----H--VGLLEALEGVRLLPNTAGARTAEEAVRLAR 84 (268)
T ss_dssp CSSCS--CHHHHHHHHHHTTCSEEEEEEEECC-------------------CHHHHTTTSEEEEBCTTCCSHHHHHHHHH
T ss_pred CCCCC--CHHHHHHHHHHHCCCEEEEEEEECCC------CCCC----C--CCCHHCCHHEEECCCCCCCCCHHHHHHHHH
T ss_conf 48999--99999999998599779999851357------7888----6--420112012276450346654999999999
Q ss_pred ---H--CCCCEEEEEECCCCCC--CCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHH
Q ss_conf ---0--4991899852677765--32158999999999974125874898479899999999733481898742679788
Q T0570 114 ---K--LKNIRLIFELKSHDTP--ERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPME 186 (258)
Q Consensus 114 ---~--~~~~~l~ieiK~~~~~--~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~ 186 (258)
. ..+ .+-+|+=+++.. .....+.+..-.+++ .+.. -.-+++-|+..++++....... ++..-++.-
T Consensus 85 larE~~~t~-~IKLEVi~D~~~L~Pd~~et~~Aa~~Lv~-~GF~-VlpY~~~D~~~ak~Led~Gc~a----VMPl~spIG 157 (268)
T 2htm_A 85 LGRLLTGER-WVKLEVIPDPTYLLPDPLETLKAAERLIE-EDFL-VLPYMGPDLVLAKRLAALGTAT----VMPLAAPIG 157 (268)
T ss_dssp HHHHHHCCS-EEBCCCCSCTTTTCCCHHHHHHHHHHHHH-TTCE-ECCEECSCHHHHHHHHHHTCSC----BEEBSSSTT
T ss_pred HHHHHCCCC-EEEEEECCCCCCCCCCHHHHHHHHHHHHH-CCCE-EEEECCCCHHHHHHHHHCCCCE----EEECCCCCC
T ss_conf 999943986-47888748865679877789999999986-8968-9984687899999999769847----873444434
Q ss_pred HHHCCCEEECCCHHHHHCCHHHHHHH---HHCCCEEEEE-ECCCHHHHHHHHHCCCCEEEEC-------CHHHHHHHHHH
Q ss_conf 98528603034523320698899999---9739979996-1699899999997589988708-------68999999986
Q T0570 187 LKELGFTGLDYHYKVLQSHPDWVKDC---KVLGMTSNVW-TVDDPKLMEEMIDMGVDFITTD-------LPEETQKILHS 255 (258)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~TD-------~P~~~~~~l~~ 255 (258)
. + .. -.++..++-. +....+|++= .+..|++..+++.+|+|||..| +|..+.+.++.
T Consensus 158 -----s-g--~G----i~n~~~~~i~i~~~~~~vPvIvDAGIG~PSdAa~aMElG~DaVLvNTAIA~a~dP~~MA~Af~~ 225 (268)
T 2htm_A 158 -----S-G--WG----VRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRL 225 (268)
T ss_dssp -----T-C--CC----STTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHHH
T ss_pred -----C-C--CC----CCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHH
T ss_conf -----5-6--55----3477788999986367887687458898899999997379899853466637998999999999
No 44
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=55.58 E-value=9.3 Score=17.09 Aligned_cols=136 Identities=12% Similarity=0.071 Sum_probs=74.9
Q ss_pred HHHHHHHHHH----CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC-------HH----HHHHHHHH
Q ss_conf 8999999870----499189985267776532158999999999974125874898479-------89----99999997
Q T0570 105 LEQYLKRAKK----LKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFN-------MD----ACKEFIRL 169 (258)
Q Consensus 105 L~evl~~~~~----~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~-------~~----~l~~~~~~ 169 (258)
|+.+++.+.. .++..+.+.+-+.. -........+...+.+++...+-++.-+. .. .+..++..
T Consensus 257 l~~~~~~l~~~~~~~~~~~l~inls~~~--l~~~~f~~~l~~~l~~~~~~~~~l~~ei~e~~~~~~~~~~~~~i~~l~~~ 334 (437)
T 3hvb_A 257 ILNSIKLLAEHRAKGHQTKLFVHLSSAS--LQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATL 334 (437)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEECCHHH--HHCTTHHHHHHHHHHTTTCCTTCEEEEEEHHHHHHTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCHH--CCCHHHHHHHHHHHHHCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999875488635888834000--15836889999998631575102220000234443245555665554037
Q ss_pred HCCCCEEEE---ECCCCHHHHHHCCCEEECCCHHHHH---------CCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCC
Q ss_conf 334818987---4267978898528603034523320---------6988999999739979996169989999999758
Q T0570 170 CPKSEVSYL---NGELSPMELKELGFTGLDYHYKVLQ---------SHPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMG 237 (258)
Q Consensus 170 ~p~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~G 237 (258)
++.++.- .+..+...+..+....+-+....+. .-..++..+|+.|..+.+=-|+++++...+.++|
T Consensus 335 --G~~i~id~~g~~~~~~~~L~~l~~d~vKid~~~~~~i~~~~~~~~l~~~i~~~~~~~~~via~gVe~~~~~~~l~~~G 412 (437)
T 3hvb_A 335 --HCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAG 412 (437)
T ss_dssp --TCEEEEEEETCSSSHHHHHTTSCCSEEEECGGGSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHT
T ss_pred --CCEEEECCCCCCCCCHHHHHHCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCC
T ss_conf --762565478988434899982899999989899850488637999999999999859958995889399999999769
Q ss_pred CCEEEEC
Q ss_conf 9988708
Q T0570 238 VDFITTD 244 (258)
Q Consensus 238 VdgI~TD 244 (258)
||++.=.
T Consensus 413 id~~QG~ 419 (437)
T 3hvb_A 413 ATYIQGY 419 (437)
T ss_dssp CSEEECT
T ss_pred CCEEECC
T ss_conf 9998988
No 45
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=55.56 E-value=9.3 Score=17.09 Aligned_cols=21 Identities=10% Similarity=-0.045 Sum_probs=11.3
Q ss_pred CHHHH-HHHHHCCCCEEEEEEEE
Q ss_conf 08999-99997389999981197
Q T0570 43 SIRSL-ERASEIGAYGSEFDVHL 64 (258)
Q Consensus 43 Tl~af-~~A~~~G~~~iE~DV~l 64 (258)
-+.+| ++|-+.|. .|=+|+.+
T Consensus 82 dfk~lV~~~H~~GI-~VilD~V~ 103 (480)
T 1ud2_A 82 QLERAIGSLKSNDI-NVYGDVVM 103 (480)
T ss_dssp HHHHHHHHHHHTTC-EEEEEECC
T ss_pred HHHHHHHHHHHCCC-EEEEEECC
T ss_conf 99999999998899-99999755
No 46
>3glc_A Aldolase LSRF; TIM barrel, cytoplasm, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli k-12} PDB: 3gnd_A* 3gkf_O
Probab=55.01 E-value=9.5 Score=17.04 Aligned_cols=16 Identities=25% Similarity=0.208 Sum_probs=7.1
Q ss_pred HHHHHHHCCCEEEEEE
Q ss_conf 9999997399799961
Q T0570 208 WVKDCKVLGMTSNVWT 223 (258)
Q Consensus 208 ~v~~~~~~g~~v~~wT 223 (258)
.++++++.|+++.+||
T Consensus 163 i~~ea~~~Glpvl~~~ 178 (295)
T 3glc_A 163 LVDAGMKVGMPTMAVT 178 (295)
T ss_dssp HHHHHHTTTCCEEEEE
T ss_pred HHHHHHHHCCEEEEEE
T ss_conf 9999997198399996
No 47
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reaction intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=54.54 E-value=9.7 Score=16.99 Aligned_cols=50 Identities=22% Similarity=0.272 Sum_probs=39.0
Q ss_pred HHHHHHHHC--CCEEEEEECCC--------------------HHHHHHHHHCCCCEEEECCHHHHHHHHHHH
Q ss_conf 899999973--99799961699--------------------899999997589988708689999999861
Q T0570 207 DWVKDCKVL--GMTSNVWTVDD--------------------PKLMEEMIDMGVDFITTDLPEETQKILHSR 256 (258)
Q Consensus 207 ~~v~~~~~~--g~~v~~wTvn~--------------------~~~~~~~~~~GVdgI~TD~P~~~~~~l~~k 256 (258)
+.|+++++. ++++.+|-|-. .|.+.-+.+.|+|+|+|=+...+.++|+++
T Consensus 259 DiI~~~k~~~~~~Pv~aYqVSGEYami~~aa~~g~~d~~~~~~E~l~~~kRAGAd~IiTY~A~~~a~~L~~~ 330 (330)
T 1pv8_A 259 DIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYTPQLLQWLKEE 330 (330)
T ss_dssp HHHHHHHHHSTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHHHHHTTTC
T ss_pred HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCC
T ss_conf 999999974789987999760899999999987997577799999999986299999870199999987339
No 48
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A
Probab=52.75 E-value=10 Score=16.82 Aligned_cols=137 Identities=12% Similarity=0.059 Sum_probs=73.9
Q ss_pred HHHHHHHHHH----CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCH-------H----HHHHHHHH
Q ss_conf 8999999870----4991899852677765321589999999999741258748984798-------9----99999997
Q T0570 105 LEQYLKRAKK----LKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNM-------D----ACKEFIRL 169 (258)
Q Consensus 105 L~evl~~~~~----~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~-------~----~l~~~~~~ 169 (258)
+..+++.+.. .++..+.|.+=+.. -........+...+.+++....-++..+.. . .+..+++.
T Consensus 88 l~~~~~~l~~~~~~~~~~~l~Inls~~~--l~~~~f~~~l~~~l~~~~~~~~~l~~ei~e~~~~~~~~~~~~~i~~l~~~ 165 (268)
T 3hv8_A 88 ILNSIKLLAEHRAKGHQTKLFVHLSSAS--LQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATL 165 (268)
T ss_dssp HHHHHHHHHCC-----CEEEEEECCHHH--HTCTTHHHHHHHHHHHHTCCSSCEEEEEEHHHHHHTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECHHH--HCCHHHHHHHHHHHHHCCCCCHHEEEEECCHHHHCCHHHHHHHHHHHHCC
T ss_conf 9989999998775388746999945104--30816679999999862899402124301014211589888877765117
Q ss_pred HCCCCEEEE---ECCCCHHHHHHCCCEEECCCHHHHH---------CCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCC
Q ss_conf 334818987---4267978898528603034523320---------6988999999739979996169989999999758
Q T0570 170 CPKSEVSYL---NGELSPMELKELGFTGLDYHYKVLQ---------SHPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMG 237 (258)
Q Consensus 170 ~p~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~G 237 (258)
++.++.- .+..+...+..+....+-++...+. .-+.++..++..|..+.+=-|+++++...+.++|
T Consensus 166 --G~~lalddfg~~~~~l~~L~~l~~d~IKid~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vIaegVE~~~~~~~l~~lg 243 (268)
T 3hv8_A 166 --HCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAG 243 (268)
T ss_dssp --TCEEEEEEETCSSSTTGGGGTCCCSEEEECGGGGSSTTSHHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHT
T ss_pred --CCEEEECCCCCCCCCHHHHHCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCC
T ss_conf --761564368988653556540581068876899852441036799999999999849978999479599999999769
Q ss_pred CCEEEECC
Q ss_conf 99887086
Q T0570 238 VDFITTDL 245 (258)
Q Consensus 238 VdgI~TD~ 245 (258)
||.+.=.+
T Consensus 244 vd~~QG~~ 251 (268)
T 3hv8_A 244 ATYIQGYY 251 (268)
T ss_dssp CSEECSTT
T ss_pred CCEEECCC
T ss_conf 99978782
No 49
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=50.44 E-value=11 Score=16.60 Aligned_cols=188 Identities=14% Similarity=0.062 Sum_probs=91.2
Q ss_pred CCCCCCCCCHHHHHHHHHC-CCCEEEEEEEECCCC----EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 8788863208999999973-899999811973488----78970476554342323788887676406777898889999
Q T0570 35 KTEGSAQNSIRSLERASEI-GAYGSEFDVHLTADN----VLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYL 109 (258)
Q Consensus 35 ~~~~~pENTl~af~~A~~~-G~~~iE~DV~lTkDg----~~vv~HD~~l~r~~v~~~t~~el~~l~~~~g~~iptL~evl 109 (258)
|++.|| +..-+.+|++. |++.|-+-++...-+ .-++-+ ++...+. -| .+.-..-|-+|.+
T Consensus 18 GTgkY~--s~~~~~~ai~aSgaeiVTVAlRR~~~~~~~~~~~l~~---i~~~~~~--------lL--PNTAGc~ta~EAv 82 (264)
T 1xm3_A 18 GTGKYP--SFDIQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQ---LDLSKYT--------LL--PNTAGASTAEEAV 82 (264)
T ss_dssp ECSCSS--CHHHHHHHHHHHTCSEEEEETTSSTTC-------CTT---CCGGGSE--------EE--EECTTCSSHHHHH
T ss_pred ECCCCC--CHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHH---HCCCCEE--------EC--CCCHHHHHHHHHH
T ss_conf 748999--9999999999869987999997662778873578876---3014468--------63--5508873399999
Q ss_pred HHH---HHCC-CCEEEEEECCCCCC--CCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 998---7049-91899852677765--32158999999999974125874898479899999999733481898742679
Q T0570 110 KRA---KKLK-NIRLIFELKSHDTP--ERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELS 183 (258)
Q Consensus 110 ~~~---~~~~-~~~l~ieiK~~~~~--~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~~~~~~l~~~~~ 183 (258)
..+ +... .-.+=+|+=+++.. .....+.+..-.+++ .++. -..+.+-|+...+++....... ++..-+
T Consensus 83 r~A~lARe~~~t~~IKLEVi~D~~~LlPD~~etl~Aa~~Lv~-eGF~-VlpY~~~D~v~ak~Led~Gc~a----vMPlgs 156 (264)
T 1xm3_A 83 RIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLE-EGFI-VLPYTSDDVVLARKLEELGVHA----IMPGAS 156 (264)
T ss_dssp HHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHH-TTCC-EEEEECSCHHHHHHHHHHTCSC----BEECSS
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH-CCCE-EEEEECCCHHHHHHHHHCCCCE----EEEEHH
T ss_conf 999999980189747999944887769884678999999986-8976-9997268999999998648832----110000
Q ss_pred HHHHHHCCCEEECCCHHHHHCCHHHHHHHHH-CCCEEEEE-ECCCHHHHHHHHHCCCCEEEEC-------CHHHHHHHHH
Q ss_conf 7889852860303452332069889999997-39979996-1699899999997589988708-------6899999998
Q T0570 184 PMELKELGFTGLDYHYKVLQSHPDWVKDCKV-LGMTSNVW-TVDDPKLMEEMIDMGVDFITTD-------LPEETQKILH 254 (258)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~TD-------~P~~~~~~l~ 254 (258)
+.- .+ .. -.++..++.+.+ ...+|.+= .+-.+++....+.+|+|||..| +|..+.+.++
T Consensus 157 PIG------Sg--~G----i~n~~~l~~i~e~~~vPvIVDAGIG~pSdA~~AMElG~daVLvNTAIA~a~dPv~MA~A~~ 224 (264)
T 1xm3_A 157 PIG------SG--QG----ILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMK 224 (264)
T ss_dssp STT------CC--CC----CSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred HHC------CC--CC----CCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHCCCCHHHHHHHHH
T ss_conf 311------68--88----5787899999854886899706889989999999700899994346661899899999999
Q ss_pred H
Q ss_conf 6
Q T0570 255 S 255 (258)
Q Consensus 255 ~ 255 (258)
.
T Consensus 225 ~ 225 (264)
T 1xm3_A 225 L 225 (264)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 50
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus HB8} PDB: 2yw4_A
Probab=49.76 E-value=12 Score=16.54 Aligned_cols=22 Identities=14% Similarity=0.075 Sum_probs=18.7
Q ss_pred CCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 6320899999997389999981
Q T0570 40 AQNSIRSLERASEIGAYGSEFD 61 (258)
Q Consensus 40 pENTl~af~~A~~~G~~~iE~D 61 (258)
||..+.--+++++-|++.+|+-
T Consensus 24 ~~~~~~~~~al~~gGi~~iEvt 45 (207)
T 2yw3_A 24 GEDLLGLARVLEEEGVGALEIT 45 (207)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9999999999998799789994
No 51
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=48.94 E-value=12 Score=16.46 Aligned_cols=54 Identities=24% Similarity=0.211 Sum_probs=39.6
Q ss_pred HHCCHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHCCCCEEEE---CCHHHHHHHHHH
Q ss_conf 2069889999997399---79996169989999999758998870---868999999986
Q T0570 202 LQSHPDWVKDCKVLGM---TSNVWTVDDPKLMEEMIDMGVDFITT---DLPEETQKILHS 255 (258)
Q Consensus 202 ~~~~~~~v~~~~~~g~---~v~~wTvn~~~~~~~~~~~GVdgI~T---D~P~~~~~~l~~ 255 (258)
...-|++++.++++|. .|++-.+-=++++..+.+.||++|+| +-++.+.++|+.
T Consensus 661 ~~~vp~l~~~Lk~ag~~~i~VilgG~iP~~d~~~L~~aGV~~if~pgtni~~~~~~~l~~ 720 (727)
T 1req_A 661 LTLVPALRKELDKLGRPDILITVGGVIPEQDFDELRKDGAVEIYTPGTVIPESAISLVKK 720 (727)
T ss_dssp HHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHTTEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH
T ss_conf 889999999999679988579980778878799999779886848998099999999999
No 52
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=48.91 E-value=11 Score=16.75 Aligned_cols=30 Identities=13% Similarity=0.329 Sum_probs=22.0
Q ss_pred HCCCEEEEEECCCHHH-HHHHHHCCCCEEEE
Q ss_conf 7399799961699899-99999758998870
Q T0570 214 VLGMTSNVWTVDDPKL-MEEMIDMGVDFITT 243 (258)
Q Consensus 214 ~~g~~v~~wTvn~~~~-~~~~~~~GVdgI~T 243 (258)
+.|..+|.|--++... ++++.+..+||+++
T Consensus 62 DlG~ely~WK~eeVd~m~~k~~~~~vdGlli 92 (126)
T 2rbg_A 62 DIGYELFLWKKNEVDIFLKNLEKSEVDGLLV 92 (126)
T ss_dssp TSEEEEEEECGGGHHHHHHHHTTCCCCEEEE
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHCCCCEEE
T ss_conf 5452899867899999999999827772699
No 53
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, hydrolase; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=47.31 E-value=13 Score=16.31 Aligned_cols=21 Identities=14% Similarity=0.067 Sum_probs=10.0
Q ss_pred CHHHHH-HHHHCCCCEEEEEEEE
Q ss_conf 089999-9997389999981197
Q T0570 43 SIRSLE-RASEIGAYGSEFDVHL 64 (258)
Q Consensus 43 Tl~af~-~A~~~G~~~iE~DV~l 64 (258)
-+.++- +|-+.|. .|=+||.+
T Consensus 84 dfk~LV~~aH~~GI-~VIlDvV~ 105 (485)
T 1wpc_A 84 QLQAAVTSLKNNGI-QVYGDVVM 105 (485)
T ss_dssp HHHHHHHHHHHTTC-EEEEEECC
T ss_pred HHHHHHHHHHHCCC-EEEEEECC
T ss_conf 99999999998899-89999724
No 54
>2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A*
Probab=47.12 E-value=13 Score=16.29 Aligned_cols=62 Identities=23% Similarity=0.239 Sum_probs=38.6
Q ss_pred HHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 99999973899999811973488789704765543423237888876764067778988899999987049918998526
Q T0570 46 SLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKKLKNIRLIFELK 125 (258)
Q Consensus 46 af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~~~~g~~iptL~evl~~~~~~~~~~l~ieiK 125 (258)
++..-+++|++++++++. +.+.+.|.....+. ++++ -|+++.+.+.+.|+=.+.++++
T Consensus 49 si~~QL~~GiR~fDir~~----~~~~~~H~~~~~~~-----~~~~-------------vL~~v~~FL~~np~EvVil~~~ 106 (274)
T 2plc_A 49 SLYQQLEAGIRYIDIRAK----DNLNIYHGPIFLNA-----SLSG-------------VLETITQFLKKNPKETIIMRLK 106 (274)
T ss_dssp CHHHHHHTTCCEEEEEEC----TTSEEEETTEEEEE-----EHHH-------------HHHHHHHHHHHSTTCCEEEEEE
T ss_pred CHHHHHHCCCCEEEEECC----CCCEEEECCCCCEE-----EHHH-------------HHHHHHHHHHHCCCCEEEEEEE
T ss_conf 899998639848998869----98889968987600-----7999-------------9999999997299925999988
Q ss_pred CCCC
Q ss_conf 7776
Q T0570 126 SHDT 129 (258)
Q Consensus 126 ~~~~ 129 (258)
....
T Consensus 107 ~~~~ 110 (274)
T 2plc_A 107 DEQN 110 (274)
T ss_dssp ETTC
T ss_pred ECCC
T ss_conf 3678
No 55
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2, protein structure initiative; 2.00A {Listeria monocytogenes}
Probab=46.80 E-value=13 Score=16.26 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=31.0
Q ss_pred HHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEE
Q ss_conf 899999973997999616998999999975899887
Q T0570 207 DWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFIT 242 (258)
Q Consensus 207 ~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI~ 242 (258)
.+++.++..|..|.+=.|.+.++++.+.++|+|.+.
T Consensus 190 ~i~~~a~~~~~~vIaeGVEt~~~~~~l~~lG~d~~Q 225 (235)
T 3kzp_A 190 AWANFAQKNKLDFVVEGIETKETMTLLESHGVSIFQ 225 (235)
T ss_dssp HHHHHHHHTTCEEEEEEECSTHHHHHHHHTTCCSCE
T ss_pred HHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEE
T ss_conf 999999986998999738949999999986999945
No 56
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=46.31 E-value=12 Score=16.44 Aligned_cols=41 Identities=20% Similarity=0.185 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHC--CCEEEE-EECCCHHHHHHHHHCCCCEEEECC
Q ss_conf 698899999973--997999-616998999999975899887086
Q T0570 204 SHPDWVKDCKVL--GMTSNV-WTVDDPKLMEEMIDMGVDFITTDL 245 (258)
Q Consensus 204 ~~~~~v~~~~~~--g~~v~~-wTvn~~~~~~~~~~~GVdgI~TD~ 245 (258)
..++.+...++. ..++.+ +.|+++++++++.+ ++||++.--
T Consensus 176 ~~~~~~~~i~k~~~~~Pv~VGFGIs~~e~a~~v~~-~ADGVIVGS 219 (234)
T 2f6u_A 176 GNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGN 219 (234)
T ss_dssp CCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECH
T ss_pred CCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH-CCCEEEECH
T ss_conf 54036899997337984899899599999999995-399999896
No 57
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling protein; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=46.27 E-value=13 Score=16.21 Aligned_cols=133 Identities=13% Similarity=0.057 Sum_probs=75.3
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC-CCEEEE-E-----CC----HHHHHHHHHHHCCCCEE
Q ss_conf 9999870499189985267776532158999999999974125-874898-4-----79----89999999973348189
Q T0570 108 YLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLA-KRTDYI-S-----FN----MDACKEFIRLCPKSEVS 176 (258)
Q Consensus 108 vl~~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~-~~viv~-S-----f~----~~~l~~~~~~~p~~~~~ 176 (258)
.+......++..+.|.+-+... .......+.+.+.+.++++. +++++- + -+ ...+..+++.. +.++
T Consensus 232 a~~~~~~~~~~~LsINis~~~L-~~~~~~~~~l~~~l~~~~l~p~~lvlEItE~~~~~~~~~~~~~l~~Lr~~G--~~ia 308 (413)
T 3gfz_A 232 ALAGQLPLGKHQLAINLLPGSL-YHHPDAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRVAG--MKLA 308 (413)
T ss_dssp HHHHTTTCTTCEEEEECCHHHH-HSSTTHHHHHHHHHHHTTCCGGGEEEEEEHHHHHTCSTTHHHHHHHHHHHT--CEEE
T ss_pred HHHHHHCCCCCEEEEEECHHHH-CCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHCC--CCEE
T ss_conf 9999606899659999188997-528039999999999819397895898324643444688999999988538--7535
Q ss_pred EE---ECCCCHHHHHHCCCEEECCCHHHHHC----------CHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEE
Q ss_conf 87---42679788985286030345233206----------988999999739979996169989999999758998870
Q T0570 177 YL---NGELSPMELKELGFTGLDYHYKVLQS----------HPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFITT 243 (258)
Q Consensus 177 ~l---~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI~T 243 (258)
.- .+..+...+..+....+-+....+.. -..++..+|..|+.|.+=.|.+++++..+.++|+|.+.=
T Consensus 309 lDdfG~g~~sl~~L~~l~~d~IKiD~~~v~~i~~~~~~~~~l~~iv~la~~lgi~vIAeGVEt~~~~~~l~~lGid~~QG 388 (413)
T 3gfz_A 309 IDDFGAGYSGLSLLTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQG 388 (413)
T ss_dssp EEEETSSSCSHHHHTTCCCSEEEECHHHHTTTTTBHHHHHHHHHHHHHHHHHTCEEEEECCCSHHHHHHHHHTTCCEEES
T ss_pred ECCCCCCCHHHHHHHHCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEC
T ss_conf 55778871048999858999999898998410459668999999999999859989997188299999999779999654
No 58
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3- epimerase, D-tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=45.10 E-value=9.6 Score=17.00 Aligned_cols=27 Identities=19% Similarity=0.187 Sum_probs=22.9
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEEEE
Q ss_conf 788863208999999973899999811
Q T0570 36 TEGSAQNSIRSLERASEIGAYGSEFDV 62 (258)
Q Consensus 36 ~~~~pENTl~af~~A~~~G~~~iE~DV 62 (258)
...|++|-..+|+.|.++|+|+||+.+
T Consensus 36 ~~~~~~~l~e~~~~a~~~GydgVEl~~ 62 (290)
T 2zvr_A 36 ALAFKGDLRKGMELAKRVGYQAVEIAV 62 (290)
T ss_dssp ---CHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHCCCEEEECC
T ss_conf 322688999999999984999899677
No 59
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=43.57 E-value=14 Score=15.96 Aligned_cols=40 Identities=5% Similarity=0.062 Sum_probs=28.4
Q ss_pred HHHHHHHH-CCCEEEEE-ECCCHHHHHHHHHCCCCEEEECCH
Q ss_conf 89999997-39979996-169989999999758998870868
Q T0570 207 DWVKDCKV-LGMTSNVW-TVDDPKLMEEMIDMGVDFITTDLP 246 (258)
Q Consensus 207 ~~v~~~~~-~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~TD~P 246 (258)
.++.++.+ .+.+|.+. -+-+..++..++.+|+|||..--+
T Consensus 198 ~l~~~v~~~~~vPViaAGGI~~g~~iaaAlalGAdgV~~GT~ 239 (369)
T 3bw2_A 198 SLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTA 239 (369)
T ss_dssp HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCE
T ss_conf 899999973699779406777999999999829787998753
No 60
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreductase; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=42.84 E-value=15 Score=15.89 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=21.5
Q ss_pred HHHHHHH-CCCEEEEE-ECCCHHHHHHHHHCCCCEEEE
Q ss_conf 9999997-39979996-169989999999758998870
Q T0570 208 WVKDCKV-LGMTSNVW-TVDDPKLMEEMIDMGVDFITT 243 (258)
Q Consensus 208 ~v~~~~~-~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~T 243 (258)
++....+ ..++|.+. -|-+..++..++.+|++|+.-
T Consensus 163 l~~~v~~~~~iPviaAGGI~dg~~iaaal~lGA~gV~~ 200 (328)
T 2gjl_A 163 LLPAAANRLRVPIIASGGFADGRGLVAALALGADAINM 200 (328)
T ss_dssp HHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHCCCEECCCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 59999973168664047868889999999539898998
No 61
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=41.44 E-value=16 Score=15.76 Aligned_cols=40 Identities=18% Similarity=0.082 Sum_probs=27.8
Q ss_pred CHHHHHHHHHC--CCEEEE-EECCCHHHHHHHHHCCCCEEEECC
Q ss_conf 98899999973--997999-616998999999975899887086
Q T0570 205 HPDWVKDCKVL--GMTSNV-WTVDDPKLMEEMIDMGVDFITTDL 245 (258)
Q Consensus 205 ~~~~v~~~~~~--g~~v~~-wTvn~~~~~~~~~~~GVdgI~TD~ 245 (258)
..+.+....+. .+++.+ +-|.++++.+++. .++|||++--
T Consensus 169 ~~e~~~~~~k~~t~~Pv~VGFGIs~~e~a~~i~-~~ADGVVVGS 211 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH-HCCCEEEECH
T ss_conf 316699999864686499977849999999998-0699999897
No 62
>2p10_A MLL9387 protein; NP_085906.1, hypothetical protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti MAFF303099} SCOP: c.1.12.9
Probab=41.08 E-value=16 Score=15.72 Aligned_cols=88 Identities=9% Similarity=0.067 Sum_probs=43.1
Q ss_pred EEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCEEECCCHHHHHCCHHHHHHHHHCC--CEEEEE--ECCCHH
Q ss_conf 4898479899999999733481898742679788985286030345233206988999999739--979996--169989
Q T0570 153 TDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLG--MTSNVW--TVDDPK 228 (258)
Q Consensus 153 viv~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g--~~v~~w--Tvn~~~ 228 (258)
.+...|+.+..+.+.+..|++-.. ......- ...+.......-+......++++.+++-+ ..+.+. ++.+|+
T Consensus 166 t~~~~~~~~~A~a~a~aGaDiI~~--e~~~t~G--g~ig~~~a~sl~~~~e~i~~~~~aa~~vn~diivLc~gGpI~tp~ 241 (286)
T 2p10_A 166 TTPYVFSPEDAVAMAKAGADILVC--HMGLTTG--GAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPE 241 (286)
T ss_dssp ECCEECSHHHHHHHHHHTCSEEEE--ECSCC-----------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHH
T ss_pred CCCCCCCHHHHHHHHHCCCCEEEE--CCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH
T ss_conf 203238999999999819999997--6874457--875668777889999999999999997299877983378879989
Q ss_pred HHHHHHH--CCCCEEEEC
Q ss_conf 9999997--589988708
Q T0570 229 LMEEMID--MGVDFITTD 244 (258)
Q Consensus 229 ~~~~~~~--~GVdgI~TD 244 (258)
+.++.++ .|++|++--
T Consensus 242 D~~~~l~~~~g~~Gf~ga 259 (286)
T 2p10_A 242 DARFILDSCQGCHGFYGA 259 (286)
T ss_dssp HHHHHHHHCTTCCEEEES
T ss_pred HHHHHHHCCCCCCEEEEC
T ss_conf 999999718887189733
No 63
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=40.22 E-value=13 Score=16.15 Aligned_cols=26 Identities=15% Similarity=0.086 Sum_probs=21.2
Q ss_pred CCCCCCCCH-HHHHHHHHCCCCEEEEE
Q ss_conf 788863208-99999997389999981
Q T0570 36 TEGSAQNSI-RSLERASEIGAYGSEFD 61 (258)
Q Consensus 36 ~~~~pENTl-~af~~A~~~G~~~iE~D 61 (258)
+..|||.++ .+|+.|.++|+++||+-
T Consensus 9 ~~~f~e~pl~e~~~~a~e~Gf~giE~~ 35 (260)
T 1k77_A 9 SMMFTEVPFIERFAAARKAGFDAVEFL 35 (260)
T ss_dssp TTSSTTSCGGGHHHHHHHHTCSEEECS
T ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 342689999999999998099999988
No 64
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=40.16 E-value=16 Score=15.64 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=10.2
Q ss_pred HHHHH-HHHHCCCCEEEEEEEE
Q ss_conf 89999-9997389999981197
Q T0570 44 IRSLE-RASEIGAYGSEFDVHL 64 (258)
Q Consensus 44 l~af~-~A~~~G~~~iE~DV~l 64 (258)
+.++- +|-+.|. .|=+|+.+
T Consensus 71 ~k~Lv~~ah~~Gi-~VilD~V~ 91 (405)
T 1ht6_A 71 LKSLIGALHGKGV-QAIADIVI 91 (405)
T ss_dssp HHHHHHHHHHTTC-EEEEEECC
T ss_pred HHHHHHHHHHCCC-EEEEEEEC
T ss_conf 9999999998889-89986404
No 65
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=40.10 E-value=14 Score=16.11 Aligned_cols=16 Identities=13% Similarity=-0.120 Sum_probs=11.1
Q ss_pred CHHHHHHHHHCCCEEE
Q ss_conf 9889999997399799
Q T0570 205 HPDWVKDCKVLGMTSN 220 (258)
Q Consensus 205 ~~~~v~~~~~~g~~v~ 220 (258)
-+.+++.++++|..+.
T Consensus 168 L~~ll~~lk~~Gy~fv 183 (216)
T 2c71_A 168 LDIIIPTLKSRGYEFV 183 (216)
T ss_dssp HHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHCCCEEE
T ss_conf 9999999997899998
No 66
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic degradation; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=39.54 E-value=17 Score=15.58 Aligned_cols=98 Identities=12% Similarity=0.216 Sum_probs=62.2
Q ss_pred CEEEEECCHHHHHHHHHHH--CCCCEEEEECCCCHHHHH-HCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEECCCHH
Q ss_conf 7489847989999999973--348189874267978898-5286030345233206988999999739979996169989
Q T0570 152 RTDYISFNMDACKEFIRLC--PKSEVSYLNGELSPMELK-ELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDDPK 228 (258)
Q Consensus 152 ~viv~Sf~~~~l~~~~~~~--p~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTvn~~~ 228 (258)
-++++--+.+.+..+.+.. |++-..| .-+.++. .++..+-.-+.+....-.+.++.++++|+.+..+. .+++
T Consensus 168 lvi~qIEt~eavenldeI~av~GvD~if----iGP~DLS~slG~pg~~~~p~v~~ai~~v~~~~~~~gk~~G~~~-~~~~ 242 (287)
T 2v5j_A 168 CVLVQIETREAMKNLPQILDVEGVDGVF----IGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILI-ANEQ 242 (287)
T ss_dssp EEEEEECSHHHHHTHHHHHTSTTEEEEE----ECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEEC-CCHH
T ss_pred EEEEECCCHHHHHHHHHHHCCCCCCEEE----ECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC-CCHH
T ss_conf 8865225599999899975547886488----8849987642888899987899999999999998599514758-9999
Q ss_pred HHHHHHHCCCCEEEEC-CHHHHHHHHH
Q ss_conf 9999997589988708-6899999998
Q T0570 229 LMEEMIDMGVDFITTD-LPEETQKILH 254 (258)
Q Consensus 229 ~~~~~~~~GVdgI~TD-~P~~~~~~l~ 254 (258)
+++++++.|++.+..- +-..+.+..+
T Consensus 243 ~~~~~~~~G~~~i~~g~D~~~l~~~~~ 269 (287)
T 2v5j_A 243 LAKRYLELGALFVAVGVDTTLLARAAE 269 (287)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEHHHHHHHHHHHH
T ss_conf 999999749989997689999999999
No 67
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=39.10 E-value=15 Score=15.86 Aligned_cols=51 Identities=14% Similarity=0.222 Sum_probs=38.3
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCC
Q ss_conf 6737998137888788863208999999973899999811973488789704765
Q T0570 23 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDND 77 (258)
Q Consensus 23 ~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~ 77 (258)
++..||-++| +.+ -+.+..|++.|....+-..|+.|-++.||+..+..+..
T Consensus 2 kkv~ii~~~~---P~~-~~~~~~al~~Ala~~a~~~~V~vff~~dGV~~l~~~~~ 52 (119)
T 2d1p_B 2 KRIAFVFSTA---PHG-TAAGREGLDALLATSALTDDLAVFFIADGVFQLLPGQK 52 (119)
T ss_dssp CCEEEEECSC---TTT-STHHHHHHHHHHHHHTTCSCEEEEECGGGGGGGCTTCC
T ss_pred CEEEEEECCC---CCC-CHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCC
T ss_conf 7799996689---988-67899999999999847997799993458998722588
No 68
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyamines, parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=38.52 E-value=17 Score=15.48 Aligned_cols=19 Identities=21% Similarity=0.319 Sum_probs=9.1
Q ss_pred CHHHHHHHHHCCCCEEEEE
Q ss_conf 0899999997389999981
Q T0570 43 SIRSLERASEIGAYGSEFD 61 (258)
Q Consensus 43 Tl~af~~A~~~G~~~iE~D 61 (258)
|..-++.|++.|+..+-+|
T Consensus 116 ~~~~i~~A~~~gv~~i~~d 134 (424)
T 7odc_A 116 QVSQIKYAASNGVQMMTFD 134 (424)
T ss_dssp CHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHCCCCEEEEC
T ss_conf 9999999998599679967
No 69
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, degradation of homoprotocatechuate, class II aldolase; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=38.28 E-value=17 Score=15.46 Aligned_cols=98 Identities=12% Similarity=0.164 Sum_probs=63.5
Q ss_pred EEEEECCHHHHHHHHHHH--CCCCEEEEECCCCHHHHH-HCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEECCCHHH
Q ss_conf 489847989999999973--348189874267978898-52860303452332069889999997399799961699899
Q T0570 153 TDYISFNMDACKEFIRLC--PKSEVSYLNGELSPMELK-ELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDDPKL 229 (258)
Q Consensus 153 viv~Sf~~~~l~~~~~~~--p~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTvn~~~~ 229 (258)
++++--+.+.+..+.+.. |.+-..| .-+.++. .++..+-.-+......-.+.++.++++|+.+..+. .+++.
T Consensus 148 ~i~qIEt~~av~nleeI~av~GvD~i~----iGp~DLs~slG~pg~~~~p~~~~ai~~v~~~~~~~gk~~G~~~-~~~~~ 222 (267)
T 2vws_A 148 LLVQVESKTALDNLDEILDVEGIDGVF----IGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA-VAPDM 222 (267)
T ss_dssp EEEECCSHHHHHTHHHHHTSTTCCEEE----ECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC-SSHHH
T ss_pred EEEECCCHHHHHHHHHHHCCCCCCEEE----ECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECC-CCHHH
T ss_conf 000106789999799874568985356----7717888733999888981599999999999998799767637-99999
Q ss_pred HHHHHHCCCCEEE-ECCHHHHHHHHHH
Q ss_conf 9999975899887-0868999999986
Q T0570 230 MEEMIDMGVDFIT-TDLPEETQKILHS 255 (258)
Q Consensus 230 ~~~~~~~GVdgI~-TD~P~~~~~~l~~ 255 (258)
.+++++.|++.+. ..+...+.+.+++
T Consensus 223 ~~~~~~~G~~~i~~g~D~~~l~~~~~~ 249 (267)
T 2vws_A 223 AQQCLAWGANFVAVGVDTMLYSDALDQ 249 (267)
T ss_dssp HHHHHHTTCCEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEHHHHHHHHHHHHH
T ss_conf 999997599999953899999999999
No 70
>3fem_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, synthase, biosynthetic protein, transferase; 3.02A {Saccharomyces cerevisiae}
Probab=37.69 E-value=18 Score=15.41 Aligned_cols=52 Identities=15% Similarity=0.183 Sum_probs=37.8
Q ss_pred HHCCHHHHHHHHHCCC-EEEEE---ECCCHHHHHHHHHCCCCEEEE-------CCHHHHHHHH
Q ss_conf 2069889999997399-79996---169989999999758998870-------8689999999
Q T0570 202 LQSHPDWVKDCKVLGM-TSNVW---TVDDPKLMEEMIDMGVDFITT-------DLPEETQKIL 253 (258)
Q Consensus 202 ~~~~~~~v~~~~~~g~-~v~~w---Tvn~~~~~~~~~~~GVdgI~T-------D~P~~~~~~l 253 (258)
+...-+++.+.++.|+ +|.-+ .|-+|++..-++.+|+|||+. .+|.+..+.+
T Consensus 189 ~~ap~~Lv~~v~~~grLPVvnFAAGGIATPADAALmMqLG~DGVFVGSGIFKS~dP~krA~AI 251 (297)
T 3fem_A 189 MRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAV 251 (297)
T ss_dssp TTCCHHHHHHHHHHTSCSSEEEBCSSCCSHHHHHHHHHTTCSCEECCSSSTTSSSHHHHHHHH
T ss_pred HCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH
T ss_conf 688799999999968988467546885883779999972898798666524689989999999
No 71
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=36.68 E-value=19 Score=15.31 Aligned_cols=98 Identities=11% Similarity=0.105 Sum_probs=61.4
Q ss_pred CEEEEECCHHHHHHHHHHH--CCCCEEEEECCCCHHHHH-HCCCEEECCCHHHHHCCHHHHHHHHHCCCEEEEEECCCHH
Q ss_conf 7489847989999999973--348189874267978898-5286030345233206988999999739979996169989
Q T0570 152 RTDYISFNMDACKEFIRLC--PKSEVSYLNGELSPMELK-ELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDDPK 228 (258)
Q Consensus 152 ~viv~Sf~~~~l~~~~~~~--p~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wTvn~~~ 228 (258)
.++++--+++.+..+.+.. |.+-..++ -+.++. .++..+-..+......-...++.++++|+.+..+. .+++
T Consensus 147 ~vi~~IEt~~av~n~~eI~av~gvD~l~i----G~~DLs~slG~~~~~~~p~v~~ai~~i~~a~~~~G~~~G~~~-~~~~ 221 (256)
T 1dxe_A 147 TILVQIESQQGVDNVDAIAATEGVDGIFV----GPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA-PVEA 221 (256)
T ss_dssp EEEEEECSHHHHHTHHHHHTSTTCCEEEE----CHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC-CSHH
T ss_pred EEEEEECCHHHHHHHHHHHCCCCCCEEEE----CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECC-CCHH
T ss_conf 69999777999995999956877777998----620688873667777887899999999999998499489807-9999
Q ss_pred HHHHHHHCCCCEEE-ECCHHHHHHHHH
Q ss_conf 99999975899887-086899999998
Q T0570 229 LMEEMIDMGVDFIT-TDLPEETQKILH 254 (258)
Q Consensus 229 ~~~~~~~~GVdgI~-TD~P~~~~~~l~ 254 (258)
..+++++.|++.+. ..+-..+.+..+
T Consensus 222 ~a~~~~~~G~~~v~~g~D~~~l~~~~~ 248 (256)
T 1dxe_A 222 DARRYLEWGATFVAVGSDLGVFRSATQ 248 (256)
T ss_dssp HHHHHHHTTCCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEECHHHHHHHHHHH
T ss_conf 999999839998998148999999999
No 72
>3da7_A Barnase circular permutant; circular permutant, protein-protein complex, endonuclease, cytoplasm, protein binding; 2.25A {Bacillus amyloliquefaciens}
Probab=35.85 E-value=17 Score=15.46 Aligned_cols=51 Identities=14% Similarity=0.201 Sum_probs=30.3
Q ss_pred CCCEEEEEE------------EECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 899999811------------9734887897047655434232378888767640677789888999999870499
Q T0570 54 GAYGSEFDV------------HLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKKLKN 117 (258)
Q Consensus 54 G~~~iE~DV------------~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~~~~g~~iptL~evl~~~~~~~~ 117 (258)
|-.+.|+|| -.|.||...+.+|.. -|+.+++ ..+-|-++++|.+++.++..
T Consensus 2 Gr~w~EaDi~y~~G~Rga~Ri~yS~dGliy~T~DHY--------~tF~~V~-----~~~~~~~~~~Va~Yl~~~~~ 64 (111)
T 3da7_A 2 GRTWREADINYTSGFRNSDRILYSSDWLIYKTTDHY--------QTFTKIR-----CAQVINTFDGVADYLQTYHK 64 (111)
T ss_dssp -CCEEEEECSCCSBSCCSCEEEEETTCCEEEESSTT--------SCCEECC-----CSSCCSHHHHHHHHHHHHSS
T ss_pred CCEEEECCCCCCCCCCCCCEEEEECCCCEEEECCHH--------HHHHHHH-----HHCCCCCHHHHHHHHHHHCC
T ss_conf 955688123676788886368995897679705322--------5267766-----51101368999999999585
No 73
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=35.46 E-value=19 Score=15.19 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=13.8
Q ss_pred HHHHHHHHCCCEEEEEECCCHHHHHHHHH-CCCC
Q ss_conf 89999997399799961699899999997-5899
Q T0570 207 DWVKDCKVLGMTSNVWTVDDPKLMEEMID-MGVD 239 (258)
Q Consensus 207 ~~v~~~~~~g~~v~~wTvn~~~~~~~~~~-~GVd 239 (258)
++++.++..|+.+.+ .|.+.+++.+.+. .|++
T Consensus 141 ~l~~~a~~lGle~Lv-Evh~~~El~ral~~~~a~ 173 (251)
T 1i4n_A 141 EIYEAAEELGMDSLV-EVHSREDLEKVFSVIRPK 173 (251)
T ss_dssp HHHHHHHTTTCEEEE-EECSHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHCCEEEE-EECCHHHHHHHHCCCCCC
T ss_conf 999999985661453-518999999872547882
No 74
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=35.42 E-value=19 Score=15.19 Aligned_cols=201 Identities=15% Similarity=0.079 Sum_probs=96.0
Q ss_pred CCCEEEEECCC-----CCCCCCCCCCHHHHHHHHHC-CCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 67379981378-----88788863208999999973-8999998119734887897047655434232378888767640
Q T0570 23 DNTKVIAHRGY-----WKTEGSAQNSIRSLERASEI-GAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQL 96 (258)
Q Consensus 23 ~~~~iiaHRG~-----~~~~~~pENTl~af~~A~~~-G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v~~~t~~el~~l~~ 96 (258)
..|+.|+-+=+ -|++.|| +..-+.+|++. |++.|-+-+++..-+.- -+. +.-|+.|+..++
T Consensus 8 ~d~l~I~g~~f~SRLilGTgky~--s~~~~~~ai~aSgaeiVTVAlRR~~~~~~--~~~---------~~~l~~i~~~~~ 74 (265)
T 1wv2_A 8 DTPFVIAGRTYGSRLLVGTGKYK--DLDETRRAIEASGAEIVTVAVRRTNIGQN--PDE---------PNLLDVIPPDRY 74 (265)
T ss_dssp -CCEEETTEEESCCEEECCSCSS--SHHHHHHHHHHSCCSEEEEEGGGCCC------------------------CTTTS
T ss_pred CCCEEECCEEEECCEEEECCCCC--CHHHHHHHHHHHCCCEEEEEEECCCCCCC--CCC---------CCHHHHHCCCCE
T ss_conf 99979999998853788738999--99999999998599879999831355668--873---------006765024784
Q ss_pred ---CCCCCCCCHHHHHHH---HHH-CC-CCEEEEEECCCCCC-C-CCHHHHHHHHHHHHHHCCCCCE-EEEECCHHHHHH
Q ss_conf ---677789888999999---870-49-91899852677765-3-2158999999999974125874-898479899999
Q T0570 97 ---SNGEKLPTLEQYLKR---AKK-LK-NIRLIFELKSHDTP-E-RNRDAARLSVQMVKRMKLAKRT-DYISFNMDACKE 165 (258)
Q Consensus 97 ---~~g~~iptL~evl~~---~~~-~~-~~~l~ieiK~~~~~-~-~~~~~~~~~~~~i~~~~~~~~v-iv~Sf~~~~l~~ 165 (258)
.+....-|-+|.+.. .+. +. .-.+-+|+=+++.. . ....+.+..-.+++ -++ .| .+.+-|+...++
T Consensus 75 ~lLPNTAGc~tAeEAv~~A~lARE~~~gt~~iKLEVi~D~~~LlPD~~etl~Aa~~Lv~-~GF--~VlpY~~~D~vlak~ 151 (265)
T 1wv2_A 75 TILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVK-DGF--DVMVYTSDDPIIARQ 151 (265)
T ss_dssp EEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHT-TTC--EEEEEECSCHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH-CCC--EEEEEECCCHHHHHH
T ss_conf 76685899861999999999999970897558975425755567328889999999974-791--699950743999999
Q ss_pred HHHHHCCCCEEEEECCCCHHHHHHCCCEEECCCHHHHHCCHHHHHHHHH-CCCEEEEE-ECCCHHHHHHHHHCCCCEEEE
Q ss_conf 9997334818987426797889852860303452332069889999997-39979996-169989999999758998870
Q T0570 166 FIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKV-LGMTSNVW-TVDDPKLMEEMIDMGVDFITT 243 (258)
Q Consensus 166 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~T 243 (258)
+.... +..++..-++.. .+ .+ -.++..++.+.+ ...+|++= .+-.|++..+++.+|+|||..
T Consensus 152 Led~G----c~avMPlgsPIG------Sg--~G----i~n~~~l~~i~~~~~vpvIvDAGIG~pSdAa~aMElG~DaVLv 215 (265)
T 1wv2_A 152 LAEIG----CIAVMPLAGLIG------SG--LG----ICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLM 215 (265)
T ss_dssp HHHSC----CSEEEECSSSTT------CC--CC----CSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHCC----CCEEEECCCHHH------HC--CC----CCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEE
T ss_conf 98669----848753435655------44--57----4787899988732783289726889889999999710899994
Q ss_pred C-------CHHHHHHHHHH
Q ss_conf 8-------68999999986
Q T0570 244 D-------LPEETQKILHS 255 (258)
Q Consensus 244 D-------~P~~~~~~l~~ 255 (258)
| +|..+.+.++.
T Consensus 216 NTAIA~a~dPv~MA~A~~~ 234 (265)
T 1wv2_A 216 NTAIAHAKDPVMMAEAMKH 234 (265)
T ss_dssp SHHHHTSSSHHHHHHHHHH
T ss_pred CHHHHCCCCHHHHHHHHHH
T ss_conf 3476627998999999999
No 75
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=35.19 E-value=20 Score=15.17 Aligned_cols=36 Identities=11% Similarity=0.185 Sum_probs=25.8
Q ss_pred CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEE
Q ss_conf 66737998137888788863208999999973899999811
Q T0570 22 KDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDV 62 (258)
Q Consensus 22 ~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV 62 (258)
+.-|.|.-=||. -||.-++--++.++.|.+.+|+-.
T Consensus 5 ~~~Pviavlr~~-----~~~~a~~~a~al~~~Gi~~iEitl 40 (212)
T 2v82_A 5 TKLPLIAILRGI-----TPDEALAHVGAVIDAGFDAVEIPL 40 (212)
T ss_dssp SSSCEEEECTTC-----CHHHHHHHHHHHHHHTCCEEEEET
T ss_pred CCCCEEEEECCC-----CHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 779889997589-----999999999999986999899958
No 76
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (ggdef & EAL domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans atcc 25259} PDB: 3ii8_A*
Probab=34.44 E-value=20 Score=15.09 Aligned_cols=203 Identities=13% Similarity=0.079 Sum_probs=102.2
Q ss_pred HHHHHHHCCCCEEEEEEEEC-CCCEEEEECCCCCCCCCC---CCCCHHHHHHHHCCCCCC----CCCHHHHHHHHHH---
Q ss_conf 99999973899999811973-488789704765543423---237888876764067778----9888999999870---
Q T0570 46 SLERASEIGAYGSEFDVHLT-ADNVLVVYHDNDIQGKHI---QSCTYDELKDLQLSNGEK----LPTLEQYLKRAKK--- 114 (258)
Q Consensus 46 af~~A~~~G~~~iE~DV~lT-kDg~~vv~HD~~l~r~~v---~~~t~~el~~l~~~~g~~----iptL~evl~~~~~--- 114 (258)
-++.|++.+-=.+++=-.+. ++|.++.+- -+-|..- .-++.+++-.+-...+.. .-.|++++..+..
T Consensus 30 ~L~~Al~~~~f~l~yQPIvdl~s~~i~g~E--~L~R~~~~~~~~~~~~~f~~~~~~~~l~~~l~~~~l~~~~~~~~~~~~ 107 (294)
T 2r6o_A 30 RLRQALERNELVLHYQPIVELASGRIVGGE--ALVRWEDPERGLVMPSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQ 107 (294)
T ss_dssp HHHHHHHTTCEEEEEEEEEETTTCCEEEEE--EEEEEEETTTEEECGGGTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEEEEEECCCCCEEEEE--EEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999869889998310898999999999--899458799882188999999987496325579999999999888987
Q ss_pred ----CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEC-------C----HHHHHHHHHHHCCCCEEEE-
Q ss_conf ----49918998526777653215899999999997412587489847-------9----8999999997334818987-
Q T0570 115 ----LKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISF-------N----MDACKEFIRLCPKSEVSYL- 178 (258)
Q Consensus 115 ----~~~~~l~ieiK~~~~~~~~~~~~~~~~~~i~~~~~~~~viv~Sf-------~----~~~l~~~~~~~p~~~~~~l- 178 (258)
..+..+.+.+-+. .-........+...+...++....++.-+ + ...+..+++. ++.++.-
T Consensus 108 ~~~~~~~~~~~i~l~~~--~l~~~~~~~~l~~~l~~~~i~~~~l~~~~~~~~~~~~~~~~~~~i~~L~~~--G~~ialDd 183 (294)
T 2r6o_A 108 QGRAADDLTLSVNISTR--QFEGEHLTRAVDRALARSGLRPDCLELEITENVMLVMTDEVRTCLDALRAR--GVRLALDD 183 (294)
T ss_dssp TTCSCTTCCEEEEECGG--GGGGGHHHHHHHHHHHHHCCCGGGEEEEEEGGGGGGCCHHHHHHHHHHHHH--TCEEEEEE
T ss_pred HCCCCCCCEEEEECCHH--HHCCHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHC--CCEEEEEC
T ss_conf 24677665036544799--963236999999999862788557356663140014589999999999975--99899955
Q ss_pred --ECCCCHHHHHHCCCEEECCCHHHHH----------CCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECC-
Q ss_conf --4267978898528603034523320----------698899999973997999616998999999975899887086-
Q T0570 179 --NGELSPMELKELGFTGLDYHYKVLQ----------SHPDWVKDCKVLGMTSNVWTVDDPKLMEEMIDMGVDFITTDL- 245 (258)
Q Consensus 179 --~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~g~~v~~wTvn~~~~~~~~~~~GVdgI~TD~- 245 (258)
.+..+...+.......+-+....+. ..+.++.-++..|+.|.+=-|++++++..+.++|+|.+.=.+
T Consensus 184 ~g~~~~~~~~l~~l~~d~iKld~~~v~~~~~~~~~~~i~~~i~~~a~~~~i~vIaeGVEt~~~~~~l~~lGid~~QG~~~ 263 (294)
T 2r6o_A 184 FGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEGIETAQQYAFLRDRGCEFGQGNLM 263 (294)
T ss_dssp ETSSCBCHHHHHHSCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHTTCCEECSTTT
T ss_pred CCCCCCCHHHHHHCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCC
T ss_conf 89973008887413403423568998623247477999999999998779989998458699999999869999888921
Q ss_pred -----HHHHHHHHH
Q ss_conf -----899999998
Q T0570 246 -----PEETQKILH 254 (258)
Q Consensus 246 -----P~~~~~~l~ 254 (258)
++.+.++|+
T Consensus 264 ~~P~~~~~~~~~l~ 277 (294)
T 2r6o_A 264 STPQAADAFASLLD 277 (294)
T ss_dssp CCCEEHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
T ss_conf 36799999999998
No 77
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=33.89 E-value=21 Score=15.04 Aligned_cols=20 Identities=15% Similarity=0.290 Sum_probs=12.4
Q ss_pred CCHHHHHHHHHCCCCEEEEE
Q ss_conf 20899999997389999981
Q T0570 42 NSIRSLERASEIGAYGSEFD 61 (258)
Q Consensus 42 NTl~af~~A~~~G~~~iE~D 61 (258)
-|...++.|++.|+..+-+|
T Consensus 115 Ks~~~i~~A~~~Gv~~~~vD 134 (448)
T 3btn_A 115 KQVSQIKYAAKVGVNIMTCD 134 (448)
T ss_dssp CCHHHHHHHHHHTCCEEEEC
T ss_pred CCHHHHHHHHHCCCCEEEEC
T ss_conf 99999999998799499989
No 78
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=33.74 E-value=21 Score=15.02 Aligned_cols=18 Identities=28% Similarity=0.274 Sum_probs=13.5
Q ss_pred HHHHHHCCCCEEEEEEEE
Q ss_conf 999997389999981197
Q T0570 47 LERASEIGAYGSEFDVHL 64 (258)
Q Consensus 47 f~~A~~~G~~~iE~DV~l 64 (258)
+++-..+|+++|++||+=
T Consensus 39 L~~LK~~GVdGVmvDvWW 56 (495)
T 1wdp_A 39 LLQLRAAGVDGVMVDVWW 56 (495)
T ss_dssp HHHHHHTTCCEEEEEEEH
T ss_pred HHHHHHCCCCEEEEEEEE
T ss_conf 999998598689996353
No 79
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=33.65 E-value=21 Score=15.02 Aligned_cols=50 Identities=18% Similarity=0.254 Sum_probs=38.7
Q ss_pred HHHHHHHHC--CCEEEEEECCC--------------------HHHHHHHHHCCCCEEEECCHHHHHHHHHHH
Q ss_conf 899999973--99799961699--------------------899999997589988708689999999861
Q T0570 207 DWVKDCKVL--GMTSNVWTVDD--------------------PKLMEEMIDMGVDFITTDLPEETQKILHSR 256 (258)
Q Consensus 207 ~~v~~~~~~--g~~v~~wTvn~--------------------~~~~~~~~~~GVdgI~TD~P~~~~~~l~~k 256 (258)
++|+++++. ++++.+|-|-. .|.+.-+.+.|+|.|+|=+...+.++|++.
T Consensus 270 DiI~~~k~~~~~~Pv~aYqVSGEYami~~aa~~g~~d~~~~~~Esl~~~kRAGAd~IiTY~A~~~a~~L~~~ 341 (342)
T 1h7n_A 270 DIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITYLAPEFLDWLDEE 341 (342)
T ss_dssp HHHHHHHHHTTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHHHHTTC-
T ss_pred HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHC
T ss_conf 999999985679986999720789999999986997588899999999986089889860399999987544
No 80
>1b1y_A Protein (beta-amylase); hydrolase(O-glycosyl); HET: GLC BGC; 2.50A {Hordeum vulgare} SCOP: c.1.8.1
Probab=33.65 E-value=21 Score=15.02 Aligned_cols=19 Identities=32% Similarity=0.389 Sum_probs=14.3
Q ss_pred HHHHHHHCCCCEEEEEEEE
Q ss_conf 9999997389999981197
Q T0570 46 SLERASEIGAYGSEFDVHL 64 (258)
Q Consensus 46 af~~A~~~G~~~iE~DV~l 64 (258)
.+++-..+|+++|++||+=
T Consensus 32 ~L~~LK~~GVdGVmvDvWW 50 (500)
T 1b1y_A 32 QLRKLVEAGVDGVMVDVWW 50 (500)
T ss_dssp HHHHHHHTTCCEEEEEEET
T ss_pred HHHHHHHCCCCEEEEEEEE
T ss_conf 9999998598689996341
No 81
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=32.77 E-value=22 Score=14.93 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=15.1
Q ss_pred CHHH-HHHHHHCCCCEEEEEEEE
Q ss_conf 0899-999997389999981197
Q T0570 43 SIRS-LERASEIGAYGSEFDVHL 64 (258)
Q Consensus 43 Tl~a-f~~A~~~G~~~iE~DV~l 64 (258)
++.+ +++-..+|+++|++||+=
T Consensus 35 ~l~~~L~~LK~~GVdGVmvDvWW 57 (498)
T 1fa2_A 35 KVEDELKQVKAGGCDGVMVDVWW 57 (498)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEH
T ss_pred HHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 99999999998598789996442
No 82
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek KEY, C-terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=30.30 E-value=24 Score=14.68 Aligned_cols=10 Identities=10% Similarity=0.155 Sum_probs=5.4
Q ss_pred HCCCCEEEEE
Q ss_conf 7389999981
Q T0570 52 EIGAYGSEFD 61 (258)
Q Consensus 52 ~~G~~~iE~D 61 (258)
++|+++|++-
T Consensus 47 ~LGv~~I~L~ 56 (424)
T 2dh2_A 47 SLKVKGLVLG 56 (424)
T ss_dssp HTTCSEEEEC
T ss_pred HCCCCEEEEC
T ss_conf 7499989989
No 83
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp}
Probab=29.86 E-value=24 Score=14.64 Aligned_cols=43 Identities=12% Similarity=0.023 Sum_probs=26.9
Q ss_pred HHHCCCEEEEE---ECCCHHHHHHHHHCCCCEEEEC-------CHHHHHHHHHH
Q ss_conf 99739979996---1699899999997589988708-------68999999986
Q T0570 212 CKVLGMTSNVW---TVDDPKLMEEMIDMGVDFITTD-------LPEETQKILHS 255 (258)
Q Consensus 212 ~~~~g~~v~~w---Tvn~~~~~~~~~~~GVdgI~TD-------~P~~~~~~l~~ 255 (258)
..+.+..+..+ .||. +.+..+.+.|||.+..- .|....+-|++
T Consensus 189 ~~~~~~~~~I~VDGGIn~-~~i~~l~~aGad~~V~GSaiF~~~d~~~~i~~lr~ 241 (246)
T 3inp_A 189 ISSTDRDILLEIDGGVNP-YNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRD 241 (246)
T ss_dssp HHHHTSCCEEEEESSCCT-TTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred HHCCCCCCEEEEECCCCH-HHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHH
T ss_conf 650368705999798889-99999998799999978688689999999999999
No 84
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.80A {Aeropyrum pernix K1}
Probab=25.99 E-value=28 Score=14.22 Aligned_cols=50 Identities=12% Similarity=0.017 Sum_probs=32.4
Q ss_pred CHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHCCCCEEEEC--CHHHHHHHHH
Q ss_conf 9889999997399---799961699899999997589988708--6899999998
Q T0570 205 HPDWVKDCKVLGM---TSNVWTVDDPKLMEEMIDMGVDFITTD--LPEETQKILH 254 (258)
Q Consensus 205 ~~~~v~~~~~~g~---~v~~wTvn~~~~~~~~~~~GVdgI~TD--~P~~~~~~l~ 254 (258)
-+++++.++++|. +|++-...-..+...+.++|||.+++. .+..+.+.++
T Consensus 86 ~~~~i~~Lr~~g~~~v~VivGG~~~~~~~~~~~~~Gvd~vf~~g~~~~e~v~~l~ 140 (161)
T 2yxb_A 86 MKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIFLPGTSLGEIIEKVR 140 (161)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEECTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHH
T ss_conf 9999999997699998799989988777999997797876199999999999999
No 85
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=25.55 E-value=29 Score=14.17 Aligned_cols=34 Identities=6% Similarity=0.046 Sum_probs=19.8
Q ss_pred HHHHHCCCEEEEE-ECCCHHHHHHHHHCCCCEEEE
Q ss_conf 9999739979996-169989999999758998870
Q T0570 210 KDCKVLGMTSNVW-TVDDPKLMEEMIDMGVDFITT 243 (258)
Q Consensus 210 ~~~~~~g~~v~~w-Tvn~~~~~~~~~~~GVdgI~T 243 (258)
+.++..|.+|..= -+.++-++.+++..|+|.|+-
T Consensus 240 ~~~~~~~v~IIADGGi~~sGDi~KAla~GAd~VMl 274 (400)
T 3ffs_A 240 SVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 274 (400)
T ss_dssp HHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHCCCCEEECCCCCCCCHHHHHHHCCCCHHHH
T ss_conf 99976599789448868753799999718735343
No 86
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=24.71 E-value=30 Score=14.08 Aligned_cols=18 Identities=22% Similarity=0.268 Sum_probs=7.8
Q ss_pred CHHHHHHHHHCCCCEEEE
Q ss_conf 089999999738999998
Q T0570 43 SIRSLERASEIGAYGSEF 60 (258)
Q Consensus 43 Tl~af~~A~~~G~~~iE~ 60 (258)
|...++.|++.|++.+=+
T Consensus 116 s~~el~~A~~~gv~~i~~ 133 (425)
T 1f3t_A 116 QISHIRYARDSGVDVMTF 133 (425)
T ss_dssp CHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHCCCCEEEE
T ss_conf 999999999879999996
No 87
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 1ojx_A 1ok4_A 1ok6_A
Probab=24.32 E-value=30 Score=14.03 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=33.2
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCC---CCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 89999998704991899852677765---321589999999999741258748984798999999997334818987426
Q T0570 105 LEQYLKRAKKLKNIRLIFELKSHDTP---ERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGE 181 (258)
Q Consensus 105 L~evl~~~~~~~~~~l~ieiK~~~~~---~~~~~~~~~~~~~i~~~~~~~~viv~Sf~~~~l~~~~~~~p~~~~~~l~~~ 181 (258)
+.++.+.+.++ ++.+++|.=+.... +...+.+........+.+..---+...-+.+............|+....+.
T Consensus 127 ~a~v~~e~~~~-glp~~~e~~~~g~~~~~~~~~~~v~~aaria~elGaDiiK~~~~~~~~~~~~~v~~a~~~pvvv~GG~ 205 (263)
T 1w8s_A 127 LARIKRDAVKF-DLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKVAGKVPVLMSGGP 205 (263)
T ss_dssp HHHHHHHHHHH-TCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECCSSHHHHHHHHHHTTTSCEEEECCS
T ss_pred HHHHHHHHHHC-CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf 99999999982-99089987632676567778799999999999858988984379988999999985367607884288
No 88
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=24.15 E-value=12 Score=16.34 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=14.3
Q ss_pred CHHHHHHHHHHHHHHHHHC
Q ss_conf 9078999999999997411
Q T0570 1 MNLKSTLLLLLCLMMAGMV 19 (258)
Q Consensus 1 ~~~~~~~l~~~~~~~~~~~ 19 (258)
||||+++++++++.+.++.
T Consensus 1 m~~~~~~~~~~~l~~~~~~ 19 (375)
T 2w5v_A 1 MKLKKIVFTLIALGLFSCK 19 (375)
T ss_dssp -------------------
T ss_pred CCCHHHHHHHHHHHHHHHH
T ss_conf 9707999999999999976
No 89
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A*
Probab=23.34 E-value=32 Score=13.92 Aligned_cols=24 Identities=17% Similarity=0.464 Sum_probs=11.5
Q ss_pred CCHHHHHHHHHCCCCEE-EECCHHH
Q ss_conf 99899999997589988-7086899
Q T0570 225 DDPKLMEEMIDMGVDFI-TTDLPEE 248 (258)
Q Consensus 225 n~~~~~~~~~~~GVdgI-~TD~P~~ 248 (258)
.++++.+.+..+|+|.| +|-.|+.
T Consensus 189 ET~AEir~~r~~GaD~VGMStvPE~ 213 (268)
T 1g2o_A 189 ETPAEIRMLQTLGADLVGMSTVHET 213 (268)
T ss_dssp CCHHHHHHHHHHTCSEEESSSHHHH
T ss_pred CCHHHHHHHHHCCCCEECCCCCHHH
T ss_conf 8699999998759977788877899
No 90
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transferase; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=22.84 E-value=33 Score=13.86 Aligned_cols=110 Identities=11% Similarity=0.119 Sum_probs=63.2
Q ss_pred HHHHHHCCCCCEEEEEC--CHHHHHHHHHHH----CCCCEEEEECCCCHHH---HHHC--CCEEE---------CCCHH-
Q ss_conf 99997412587489847--989999999973----3481898742679788---9852--86030---------34523-
Q T0570 142 QMVKRMKLAKRTDYISF--NMDACKEFIRLC----PKSEVSYLNGELSPME---LKEL--GFTGL---------DYHYK- 200 (258)
Q Consensus 142 ~~i~~~~~~~~viv~Sf--~~~~l~~~~~~~----p~~~~~~l~~~~~~~~---~~~~--~~~~~---------~~~~~- 200 (258)
....+.+. ..+..|| +.+.+..+|+.. +++++ +.-.-+... +.++ ..+|+ ....+
T Consensus 200 ~~~~~~~v--d~ialSFV~~~~dv~~~r~~l~~~~~~~~I--iaKIE~~~a~~nl~eIi~~sDgimiaRGDLg~e~~~e~ 275 (500)
T 1a3w_A 200 RFGVKNGV--HMVFASFIRTANDVLTIREVLGEQGKDVKI--IVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPE 275 (500)
T ss_dssp HHHHHHTC--SEEEECSCCSHHHHHHHHHHHHHHHTTSEE--EEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGG
T ss_pred HHHHHCCC--CEEEECCCCCHHHHHHHHHHHHHCCCCCEE--EEEEECHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHH
T ss_conf 34765298--789952668566799999999971998369--99973576898689888428889998887311089878
Q ss_pred HHHCCHHHHHHHHHCCCEEEEEE------CCC-------HHHHHHHHHCCCCEEEE-------CCHHHHHHHHHH
Q ss_conf 32069889999997399799961------699-------89999999758998870-------868999999986
Q T0570 201 VLQSHPDWVKDCKVLGMTSNVWT------VDD-------PKLMEEMIDMGVDFITT-------DLPEETQKILHS 255 (258)
Q Consensus 201 ~~~~~~~~v~~~~~~g~~v~~wT------vn~-------~~~~~~~~~~GVdgI~T-------D~P~~~~~~l~~ 255 (258)
.....+..++.++++|++|++-| +++ ..+...++..|+|+++- .||..+.+.++.
T Consensus 276 vp~~Qk~ii~~~~~~~kpvi~ATqmLeSM~~~~~PTRAEv~Dvanav~dG~d~vmLs~ETa~G~~P~~~v~~~~~ 350 (500)
T 1a3w_A 276 VLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAE 350 (500)
T ss_dssp HHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHHHHHHH
T ss_conf 379999999999983992998635565387589765401688988987398489974234057578999999999
No 91
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=22.09 E-value=34 Score=13.77 Aligned_cols=39 Identities=13% Similarity=0.097 Sum_probs=22.8
Q ss_pred CCCEEEE--ECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 6737998--13788878886320899999997389999981
Q T0570 23 DNTKVIA--HRGYWKTEGSAQNSIRSLERASEIGAYGSEFD 61 (258)
Q Consensus 23 ~~~~iia--HRG~~~~~~~pENTl~af~~A~~~G~~~iE~D 61 (258)
.+..|+| |.-..++....|+.-..+..+++.|+|+|=..
T Consensus 25 Gr~~ivA~DHg~~~gp~~gl~d~~~~v~~~~~~~~dai~~~ 65 (273)
T 2qjg_A 25 EKTVIVPMDHGVSNGPIKGLIDIRKTVNDVAEGGANAVLLH 65 (273)
T ss_dssp CCEEEEECCHHHHHCSCTTSSSHHHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 97899976677333887442599999999985489899967
No 92
>2qs7_A Uncharacterized protein; NP_342590.1, protein of unknown function, structural genomics, joint center for structural genomics, JCSG; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=21.15 E-value=20 Score=15.06 Aligned_cols=92 Identities=16% Similarity=0.264 Sum_probs=55.0
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCCC--CCCCHHH-----HHH
Q ss_conf 666737998137888788863208999999973899999811973488789704765543423--2378888-----767
Q T0570 21 AKDNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHI--QSCTYDE-----LKD 93 (258)
Q Consensus 21 ~~~~~~iiaHRG~~~~~~~pENTl~af~~A~~~G~~~iE~DV~lTkDg~~vv~HD~~l~r~~v--~~~t~~e-----l~~ 93 (258)
.+++..||.|.|. +|--.++|.-|.-+-+-+.|+-|-+|-+|...+.-+. .++... .+..+.. .++
T Consensus 6 ~~kkl~II~~sg~------~dr~~~a~~lA~~Aaa~g~eV~vFft~~gl~~l~k~~-~~~~~~~~~~~~~~~~~~~~~~~ 78 (144)
T 2qs7_A 6 KKKKLSIIVFSGT------IDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITKRS-LNSQQPPQIDKNYEQMGPIMMQK 78 (144)
T ss_dssp -CCEEEEEECCCS------HHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBHHH-HHCCSCCCCCGGGGGGHHHHHHH
T ss_pred CCCCEEEEEECCC------HHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 5677799996698------8999999999999998699469998311688760665-43458886431226668999999
Q ss_pred HHCCCCCCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 64067778988899999987049918998
Q T0570 94 LQLSNGEKLPTLEQYLKRAKKLKNIRLIF 122 (258)
Q Consensus 94 l~~~~g~~iptL~evl~~~~~~~~~~l~i 122 (258)
+. ..++|++.|+++.++...++.++.
T Consensus 79 ~~---~~~~p~~~eli~~a~~~G~Vk~~a 104 (144)
T 2qs7_A 79 MQ---EMKYPMWHQLVQQAKEIGEVKVFA 104 (144)
T ss_dssp HH---HTTCCCHHHHHHHHHHHSEEEEEE
T ss_pred HH---HCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 85---048988999999999749958997
No 93
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=20.45 E-value=36 Score=13.57 Aligned_cols=103 Identities=13% Similarity=0.099 Sum_probs=59.3
Q ss_pred EEEEEC--CHHHHHHHHHHHCCC---CEEEEECCCCHHHHHHC-----CCEEEC---------CCHHH-HHCCHHHHHHH
Q ss_conf 489847--989999999973348---18987426797889852-----860303---------45233-20698899999
Q T0570 153 TDYISF--NMDACKEFIRLCPKS---EVSYLNGELSPMELKEL-----GFTGLD---------YHYKV-LQSHPDWVKDC 212 (258)
Q Consensus 153 viv~Sf--~~~~l~~~~~~~p~~---~~~~l~~~~~~~~~~~~-----~~~~~~---------~~~~~-~~~~~~~v~~~ 212 (258)
.+..|| +.+.+..+|+...+. .+..+.-.-+...+.++ .++|+. ...+. ....+..++.+
T Consensus 188 ~ia~SFVr~~~dv~~~r~~l~~~~~~~~~IiaKIE~~~av~nldeI~~~sDgImVARGDLgve~~~e~vp~~QK~II~~c 267 (470)
T 1e0t_A 188 FVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKC 267 (470)
T ss_dssp EEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99987879999999999999870799871899865987876799999756789997687545579888599999999999
Q ss_pred HHCCCEEEEEE------CCC-------HHHHHHHHHCCCCEEEEC-------CHHHHHHHHHH
Q ss_conf 97399799961------699-------899999997589988708-------68999999986
Q T0570 213 KVLGMTSNVWT------VDD-------PKLMEEMIDMGVDFITTD-------LPEETQKILHS 255 (258)
Q Consensus 213 ~~~g~~v~~wT------vn~-------~~~~~~~~~~GVdgI~TD-------~P~~~~~~l~~ 255 (258)
+.+|++|++-| +++ ..+...++--|+|+++-. ||..+.+.+..
T Consensus 268 ~~~gKPVI~ATqmLeSM~~np~PTRAEvsDVaNAV~dG~DavMLS~ETA~G~yP~eaV~~m~~ 330 (470)
T 1e0t_A 268 IRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMAT 330 (470)
T ss_dssp HHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC------CHHHHHHHHH
T ss_pred HHCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHH
T ss_conf 984998899681077662189996188888999987279789977874587588999999999
No 94
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=20.45 E-value=31 Score=14.01 Aligned_cols=16 Identities=25% Similarity=-0.018 Sum_probs=11.6
Q ss_pred CHHHHHHHHHCCCEEE
Q ss_conf 9889999997399799
Q T0570 205 HPDWVKDCKVLGMTSN 220 (258)
Q Consensus 205 ~~~~v~~~~~~g~~v~ 220 (258)
-+.+++.++++|..+.
T Consensus 195 L~~iI~~lk~~Gy~fv 210 (254)
T 2vyo_A 195 LENMVKIGKDKGYRFV 210 (254)
T ss_dssp HHHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHHCCCEEE
T ss_conf 9999999997899998
Done!