Query T0571 ZP_02066433.1, Bacteroides ovatus ATCC 8483, 344 residues
Match_columns 344
No_of_seqs 153 out of 205
Neff 7.2
Searched_HMMs 15564
Date Fri Jun 4 14:32:34 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0571.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0571.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2dpka1 b.1.27.1 (A:370-502) S 30.1 12 0.00076 13.2 8.4 78 62-159 19-96 (133)
2 d1m1ca_ e.42.1.1 (A:) L-A viru 29.6 12 0.00077 13.1 3.4 63 139-207 431-493 (651)
3 d1uwfa1 b.2.3.2 (A:1-158) Mann 29.3 12 0.00078 13.1 3.4 13 156-168 113-125 (158)
4 d2dpka1 b.1.27.1 (A:370-502) S 26.3 14 0.00088 12.7 5.0 82 60-161 17-98 (133)
5 d1qbaa1 b.1.18.2 (A:781-885) B 19.4 16 0.001 12.2 0.6 42 110-155 36-82 (105)
6 d1xova1 b.34.11.4 (A:181-314) 15.1 23 0.0015 11.1 5.6 74 228-310 48-121 (134)
7 g1y43.1 b.29.1.20 (A:1-32,B:3- 14.1 25 0.0016 10.9 1.9 29 97-127 66-94 (203)
8 d1m1ca_ e.42.1.1 (A:) L-A viru 13.5 26 0.0016 10.8 3.1 63 139-207 431-493 (651)
9 d2fwua1 b.1.27.1 (A:501-657) S 12.4 27 0.0018 10.6 7.4 81 63-163 20-100 (157)
10 d2ifra1 b.29.1.20 (A:1-206) Sc 12.4 27 0.0018 10.6 1.6 29 97-127 62-90 (206)
No 1
>d2dpka1 b.1.27.1 (A:370-502) Sodium/calcium exchanger 1 {Dog (Canis familiaris) [TaxId: 9615]} SCOP: d2fwsa1
Probab=30.07 E-value=12 Score=13.16 Aligned_cols=78 Identities=22% Similarity=0.411 Sum_probs=45.4
Q ss_pred EEEEEEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHCCCEEEECCCCCEEECCCCEEECCCCEEEEEEEEEEECCCCCC
Q ss_conf 47999999851667775479999876589876521111866688586416636750797477625766799841215666
Q T0571 62 HKMVIKAAWGGGYTNRNNVVINFKVDESLCDNLYFKDTDQPLVPMPASYYTLASDRIAIPKGQIMAGVEVQLTDDFFADE 141 (344)
Q Consensus 62 ~~~~i~v~vsgs~~~~~dv~V~i~vD~slL~~~YN~~~~t~Y~~LP~~~Ysl~~~~v~I~aGe~~~~v~i~~~~~~~~~~ 141 (344)
....+.+..++.. ....+.|.+...+-. +..+ ..|...+.++.+++|+....+.|.+.+. +.
T Consensus 19 g~v~i~V~R~~g~-~~~~v~V~~~t~~gt------A~~~--------~D~~~~~g~v~F~~ge~~k~i~I~i~~D---~~ 80 (133)
T d2dpka1 19 GTVALTIIRRGGD-LTNTVFVDFRTEDGT------ANAG--------SDYEFTEGTVVFKPGETQKEIRVGIIDD---DI 80 (133)
T ss_dssp SEEEEEEEEESSC-TTSCEEEEEEEEESS------SCBT--------TTBCCCEEEEEECTTCCEEEEEEEBCCC---SS
T ss_pred CEEEEEEEECCCC-CCCEEEEEEEEECCC------CCCC--------CCCCCCCCEEEECCCCEEEEEEEEEEEC---CC
T ss_conf 4899988865789-787599988872397------6567--------6340146408865987489988888657---86
Q ss_pred CCCCCEEEEEEEEECCCC
Q ss_conf 677872588999841567
Q T0571 142 KSISENYVIPLLMTNVQG 159 (344)
Q Consensus 142 l~~~~~YvLPl~I~~~sg 159 (344)
.+.++.+.|=| .+.++
T Consensus 81 ~E~~E~f~v~L--~~~~~ 96 (133)
T d2dpka1 81 FEEDENFLVHL--SNVKV 96 (133)
T ss_dssp CCCCEEEEEEE--EEEEE
T ss_pred CCCCCEEEEEE--ECCCC
T ss_conf 67871799998--36336
No 2
>d1m1ca_ e.42.1.1 (A:) L-A virus major coat protein {Saccharomyces cerevisiae virus L-A [TaxId: 11008]}
Probab=29.64 E-value=12 Score=13.11 Aligned_cols=63 Identities=16% Similarity=0.174 Sum_probs=35.6
Q ss_pred CCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECC
Q ss_conf 666677872588999841567421245640231243111211122311147898512577664155311
Q T0571 139 ADEKSISENYVIPLLMTNVQGADSILQGKPVVENPVLTNAGDWSILPQNFVLYAVKYVNPWHGEYLRRG 207 (344)
Q Consensus 139 ~~~l~~~~~YvLPl~I~~~sg~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~l~~v~~~N~ysg~Y~~~~ 207 (344)
.+-++...+|..|+.+.+-.|+.+ .+-+++..--+. +.--|--+-+-+++-.|+|+|.+....
T Consensus 431 p~Lve~~~t~~Vpvtv~E~~gy~i--vDn~vv~~g~Pf----~GsPym~~Pia~Fd~~npy~g~f~i~~ 493 (651)
T d1m1ca_ 431 PDLLEFDAVTQVPITVIEPAGYNI--VDDHLVVVGVPV----ACSPYMIFPVAAFDTANPYCGNFVIKA 493 (651)
T ss_dssp GGGSCSSCEEEEECEECCCSCCCC--STTEEEEESCCC----CSCTTTTTTCCSSSSCCTTSSEEEECC
T ss_pred CCCCCCCCEEEEEEEEEECCCCEE--ECCEEEEECCCC----CCCCEEEEEEECCCCCCCEECCEEECC
T ss_conf 010063635687888860788256--525688843455----678736884202789983021113056
No 3
>d1uwfa1 b.2.3.2 (A:1-158) Mannose-specific adhesin FimH {Escherichia coli [TaxId: 562]}
Probab=29.33 E-value=12 Score=13.07 Aligned_cols=13 Identities=23% Similarity=0.286 Sum_probs=6.1
Q ss_pred CCCCCCCCCCCCC
Q ss_conf 1567421245640
Q T0571 156 NVQGADSILQGKP 168 (344)
Q Consensus 156 ~~sg~~~i~~~~~ 168 (344)
+..++..|.+|..
T Consensus 113 ~~a~gV~I~~G~~ 125 (158)
T d1uwfa1 113 SSAGGVAIKAGSL 125 (158)
T ss_dssp TTCCEEEECTTCE
T ss_pred CCCCCEEEECCCE
T ss_conf 9888679866988
No 4
>d2dpka1 b.1.27.1 (A:370-502) Sodium/calcium exchanger 1 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=26.34 E-value=14 Score=12.72 Aligned_cols=82 Identities=20% Similarity=0.336 Sum_probs=45.5
Q ss_pred CCEEEEEEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHCCCEEEECCCCCEEECCCCEEECCCCEEEEEEEEEEECCCC
Q ss_conf 73479999998516677754799998765898765211118666885864166367507974776257667998412156
Q T0571 60 NQHKMVIKAAWGGGYTNRNNVVINFKVDESLCDNLYFKDTDQPLVPMPASYYTLASDRIAIPKGQIMAGVEVQLTDDFFA 139 (344)
Q Consensus 60 ~~~~~~i~v~vsgs~~~~~dv~V~i~vD~slL~~~YN~~~~t~Y~~LP~~~Ysl~~~~v~I~aGe~~~~v~i~~~~~~~~ 139 (344)
+.....+.+..++.. ....+.|.+..-.-. +..+ ..|...+-++++++|+....+.|.+.+..
T Consensus 17 ~~g~v~v~V~r~~~~-~~~~v~V~~~t~~gt------A~~g--------~Dy~~~~g~i~F~~Ge~~~~i~V~i~~D~-- 79 (133)
T d2dpka1 17 NCGTVALTIIRRGGD-LTNTVFVDFRTEDGT------ANAG--------SDYEFTEGTVVFKPGETQKEIRVGIIDDD-- 79 (133)
T ss_dssp TSSEEEEEEEEESSC-TTSCEEEEEEEEESS------SCBT--------TTBCCCEEEEEECTTCCEEEEEEEBCCCS--
T ss_pred CCCEEEEEEEEECCC-CCCEEEEEEEECCCC------CCCC--------CEEECCCCEEEECCCCEEEEEEEEEECCC--
T ss_conf 883799999990788-696599999970896------5222--------00762377699789972999999998688--
Q ss_pred CCCCCCCEEEEEEEEECCCCCC
Q ss_conf 6667787258899984156742
Q T0571 140 DEKSISENYVIPLLMTNVQGAD 161 (344)
Q Consensus 140 ~~l~~~~~YvLPl~I~~~sg~~ 161 (344)
..+.++.. -|+|.++++..
T Consensus 80 -~~E~~E~F--~v~L~~~~~~~ 98 (133)
T d2dpka1 80 -IFEEDENF--LVHLSNVKVSS 98 (133)
T ss_dssp -SCCCCEEE--EEEEEEEEECC
T ss_pred -CCCCCEEE--EEEEECCCCCC
T ss_conf -77688899--99998986775
No 5
>d1qbaa1 b.1.18.2 (A:781-885) Bacterial chitobiase (N-acetyl-beta-glucoseaminidase), C-terminal domain {Serratia marcescens [TaxId: 615]}
Probab=19.42 E-value=16 Score=12.18 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=25.3
Q ss_pred CEEECCCCEEECCCCEEEE-----EEEEEEECCCCCCCCCCCEEEEEEEEE
Q ss_conf 1663675079747762576-----679984121566667787258899984
Q T0571 110 YYTLASDRIAIPKGQIMAG-----VEVQLTDDFFADEKSISENYVIPLLMT 155 (344)
Q Consensus 110 ~Ysl~~~~v~I~aGe~~~~-----v~i~~~~~~~~~~l~~~~~YvLPl~I~ 155 (344)
.|.+|...+.|..|..... +.|+.+ +|+-++-..|-.|+++.
T Consensus 36 ~yrlP~PGa~i~~g~L~~n~~~PGl~I~Yt----~DG~~p~~~y~~pv~~~ 82 (105)
T d1qbaa1 36 AYRLPVPGARVAGGKLEANIALPGLGIEYS----TDGGKQWQRYDAKAKPA 82 (105)
T ss_dssp CCCCCCCEEEEETTEEEEECSSTTSEEEEE----SSSSSSCEECCTTSCCB
T ss_pred CCCCCCCCEEEECCEEEEEECCCCCEEEEE----ECCCCCCCCCCCCCCCC
T ss_conf 400799976998899999715799589999----56995680346754545
No 6
>d1xova1 b.34.11.4 (A:181-314) Endolysin Ply, C-terminal domain {Bacteriophage Psa [TaxId: 171618]}
Probab=15.14 E-value=23 Score=11.11 Aligned_cols=74 Identities=19% Similarity=0.160 Sum_probs=48.4
Q ss_pred ECCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEE
Q ss_conf 12630588612122111122011101345540899999799738998668760210024772147774457853306899
Q T0571 228 ENDEVVNISTKSMKDNLLTLKTKDESGKDISYTVRLSFAEDGSCTVHSGSQNVVVSGSGKFVSKGEKNSLGGKDRNAIYL 307 (344)
Q Consensus 228 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~~~~ti~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 307 (344)
++|..+.+|..--.. ....+.+-.+.+.......+.|--|+..-.-+|..+++.-+.+.+|++-.+.-++|
T Consensus 48 indkl~y~yksfc~~---------~~kkdakgri~vriksakdlripvw~ntklnsgkikwy~p~tklswy~n~kgylel 118 (134)
T d1xova1 48 INDKLCYIYKSFCIS---------NGKKDAKGRIKVRIKSAKDLRIPVWNNTKLNSGKIKWYSPGTKLSWYDNKKGYLEL 118 (134)
T ss_dssp ETTEEEEEEGGGEEE---------CCCCSTTCCEEEEECCTTTCCEEEESSTTCSSSSEEEECTTCEEEEECCSSSSEEE
T ss_pred ECCEEEEEEHHHHHH---------CCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEE
T ss_conf 376478875223322---------04534567125886012122124432630036506886699766787178725999
Q ss_pred EEE
Q ss_conf 999
Q T0571 308 DYT 310 (344)
Q Consensus 308 ~Y~ 310 (344)
.|.
T Consensus 119 wy~ 121 (134)
T d1xova1 119 WYE 121 (134)
T ss_dssp EET
T ss_pred EEC
T ss_conf 982
No 7
>g1y43.1 b.29.1.20 (A:1-32,B:3-173) Aspergillopepsin II {Aspergillus niger [TaxId: 5061]}
Probab=14.06 E-value=25 Score=10.92 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=23.5
Q ss_pred HHCCCEEEECCCCCEEECCCCEEECCCCEEE
Q ss_conf 1118666885864166367507974776257
Q T0571 97 KDTDQPLVPMPASYYTLASDRIAIPKGQIMA 127 (344)
Q Consensus 97 ~~~~t~Y~~LP~~~Ysl~~~~v~I~aGe~~~ 127 (344)
..++-+|+.+|+..|.|+ .+.|++|+...
T Consensus 66 ~sy~AW~EwyP~~a~~~~--~~~v~~GD~i~ 94 (203)
T g1y43.1 66 TSYDAWYEWYPDYAYDFS--DITISEGDSIK 94 (203)
T ss_dssp EEEEEEEEEETSCCEEET--TCCCCTTCEEE
T ss_pred EEEEEEEEECCCCCCCCC--CCCCCCCCEEE
T ss_conf 989899998477765725--65288999999
No 8
>d1m1ca_ e.42.1.1 (A:) L-A virus major coat protein {Saccharomyces cerevisiae virus L-A [TaxId: 11008]}
Probab=13.51 E-value=26 Score=10.82 Aligned_cols=63 Identities=19% Similarity=0.241 Sum_probs=36.5
Q ss_pred CCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECC
Q ss_conf 666677872588999841567421245640231243111211122311147898512577664155311
Q T0571 139 ADEKSISENYVIPLLMTNVQGADSILQGKPVVENPVLTNAGDWSILPQNFVLYAVKYVNPWHGEYLRRG 207 (344)
Q Consensus 139 ~~~l~~~~~YvLPl~I~~~sg~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~l~~v~~~N~ysg~Y~~~~ 207 (344)
.+-++-+..|.+|+.+.+-.||++|...-..+--|-.. --|--+-+-++.-.|+|+|.+....
T Consensus 431 P~Ll~td~~~~Vp~~v~e~~gY~iidd~v~~~gvPf~g------sPy~~~pia~Fd~~npy~g~f~i~~ 493 (651)
T d1m1ca_ 431 PDLLEFDAVTQVPITVIEPAGYNIVDDHLVVVGVPVAC------SPYMIFPVAAFDTANPYCGNFVIKA 493 (651)
T ss_dssp GGGSCSSCEEEEECEECCCSCCCCSTTEEEEESCCCCS------CTTTTTTCCSSSSCCTTSSEEEECC
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCC------CCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 44003466336545861777640004743676676589------8644432242677886435301378
No 9
>d2fwua1 b.1.27.1 (A:501-657) Sodium/calcium exchanger 1 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=12.42 E-value=27 Score=10.60 Aligned_cols=81 Identities=15% Similarity=0.221 Sum_probs=46.9
Q ss_pred EEEEEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHCCCEEEECCCCCEEECCCCEEECCCCEEEEEEEEEEECCCCCCC
Q ss_conf 79999998516677754799998765898765211118666885864166367507974776257667998412156666
Q T0571 63 KMVIKAAWGGGYTNRNNVVINFKVDESLCDNLYFKDTDQPLVPMPASYYTLASDRIAIPKGQIMAGVEVQLTDDFFADEK 142 (344)
Q Consensus 63 ~~~i~v~vsgs~~~~~dv~V~i~vD~slL~~~YN~~~~t~Y~~LP~~~Ysl~~~~v~I~aGe~~~~v~i~~~~~~~~~~l 142 (344)
...+.|..++ .....++|.+..-+.. +. .+...|...+-++++++|+..+.+.|.+.+.. ..
T Consensus 20 ~~~v~V~R~~--g~~g~v~V~~~t~~gt------A~-------~~g~Dy~~~~g~l~F~~ge~~k~i~i~i~~D~---~~ 81 (157)
T d2fwua1 20 IMEVKVLRTS--GARGNVIVPYKTIEGT------AR-------GGGEDFEDTCGELEFQNDEIVKTISVKVIDDE---EY 81 (157)
T ss_dssp EEEEEEECCT--TCSSCEEEEEEEECTT------SC-------TTTTSEECCEEEEEECSSCCCCEEEEEECCCS---SC
T ss_pred EEEEEEEEEC--CCCCEEEEEEEEECCC------CC-------CCCCCCCCCCCCEEECCCCEEEEEEEEECCCC---CC
T ss_conf 9999999847--9986699999984897------57-------76887451567589779953899972213788---74
Q ss_pred CCCCEEEEEEEEECCCCCCCC
Q ss_conf 778725889998415674212
Q T0571 143 SISENYVIPLLMTNVQGADSI 163 (344)
Q Consensus 143 ~~~~~YvLPl~I~~~sg~~~i 163 (344)
+.++.+.|=| .+.+++...
T Consensus 82 E~~E~F~v~L--~~p~~~~~~ 100 (157)
T d2fwua1 82 EKNKTFFLEI--GEPRLVEMS 100 (157)
T ss_dssp CCCEEEEEEE--CCCEESSCC
T ss_pred CCCEEEEEEE--ECCCCCCCC
T ss_conf 6866999999--489776415
No 10
>d2ifra1 b.29.1.20 (A:1-206) Scytalidopepsin B {Fungus (Scytalidium lignicola) [TaxId: 5539]}
Probab=12.40 E-value=27 Score=10.59 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=23.2
Q ss_pred HHCCCEEEECCCCCEEECCCCEEECCCCEEE
Q ss_conf 1118666885864166367507974776257
Q T0571 97 KDTDQPLVPMPASYYTLASDRIAIPKGQIMA 127 (344)
Q Consensus 97 ~~~~t~Y~~LP~~~Ysl~~~~v~I~aGe~~~ 127 (344)
..++-+|+.+|+..|.|+ .+.|.+|+...
T Consensus 62 ~sy~AWyEwyP~~a~~~s--~~~v~~GD~i~ 90 (206)
T d2ifra1 62 GTYDAWYEWYPEVSDDFS--GITISEGDSIQ 90 (206)
T ss_dssp SCEEEEEEEESSCEEEC----CCCCTTCEEE
T ss_pred EEEEEEEEECCCCCCCCC--CCCCCCCCEEE
T ss_conf 936788997377666615--53008999999
Done!