Query T0573 NP_419019.1, CAULOBACTER CRESCENTUS, 311 residues
Match_columns 311
No_of_seqs 130 out of 2009
Neff 8.1
Searched_HMMs 22458
Date Fri Jun 4 14:31:19 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0573.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0573.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 0 0 524.6 23.7 279 4-303 2-288 (319)
2 1gp6_A Leucoanthocyanidin diox 100.0 0 0 518.1 26.4 291 3-307 44-344 (356)
3 1odm_A Isopenicillin N synthas 100.0 0 0 484.3 28.0 298 1-309 4-325 (331)
4 1dcs_A Deacetoxycephalosporin 100.0 0 0 487.6 19.1 290 3-310 2-307 (311)
5 2hbt_A EGL nine homolog 1; pro 96.0 0.093 4.2E-06 31.1 12.4 35 22-57 16-50 (247)
6 3dkq_A PKHD-type hydroxylase S 95.4 0.024 1.1E-06 35.2 5.5 80 168-270 99-195 (243)
7 2iuw_A Alkylated repair protei 94.7 0.25 1.1E-05 28.2 9.0 83 171-269 129-229 (238)
8 3h8r_A Alpha-ketoglutarate-dep 94.2 0.14 6.1E-06 30.0 6.7 85 169-269 103-204 (209)
9 3itq_A Prolyl 4-hydroxylase, a 83.9 2 9.1E-05 21.8 5.7 56 204-269 155-211 (216)
10 2dbn_A Hypothetical protein YB 75.8 2.7 0.00012 20.9 4.1 55 3-60 98-152 (461)
11 2opi_A L-fuculose-1-phosphate 64.0 3 0.00013 20.6 2.2 16 43-58 3-18 (212)
12 1e4c_P L-fuculose 1-phosphate 59.4 3.5 0.00016 20.2 1.9 13 18-30 3-15 (215)
13 2rdq_A 1-deoxypentalenic acid 58.0 8.6 0.00038 17.4 13.0 50 3-57 6-55 (288)
14 1pvt_A Sugar-phosphate aldolas 52.6 5.9 0.00026 18.6 2.1 16 44-59 4-19 (238)
15 3ms5_A Gamma-butyrobetaine dio 50.3 11 0.00051 16.6 4.5 46 2-48 119-164 (388)
16 3i3q_A Alpha-ketoglutarate-dep 46.4 13 0.00058 16.2 8.4 86 166-269 104-202 (211)
17 2z7b_A MLR6791 protein; class 42.2 15 0.00067 15.8 2.9 15 297-311 256-270 (270)
18 2v9l_A Rhamnulose-1-phosphate 37.7 11 0.00049 16.7 1.6 14 45-58 8-21 (274)
19 2krs_A Probable enterotoxin; a 36.7 18 0.0008 15.2 4.7 41 182-225 10-50 (74)
20 2kt8_A Probable surface protei 31.0 22 0.00099 14.6 3.5 39 182-222 12-50 (76)
21 2kq8_A Cell WALL hydrolase; GF 28.2 23 0.001 14.4 2.0 41 179-221 8-48 (70)
22 1m5a_B Insulin B chain; alpha 27.6 25 0.0011 14.2 2.8 18 20-37 10-27 (30)
23 2fk5_A Fuculose-1-phosphate al 27.3 25 0.0011 14.2 3.8 15 45-59 4-18 (200)
24 2rg4_A Uncharacterized protein 27.0 26 0.0011 14.1 4.3 38 216-268 168-205 (216)
25 3kbq_A Protein TA0487; structu 24.2 29 0.0013 13.8 2.1 57 5-62 36-92 (172)
26 3fgx_A Rbstp2171; structural g 23.5 30 0.0013 13.7 2.7 41 112-156 67-107 (114)
27 2k9l_A RNA polymerase sigma fa 21.1 23 0.001 14.5 0.8 37 17-53 29-71 (76)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=0 Score=524.59 Aligned_cols=279 Identities=22% Similarity=0.303 Sum_probs=248.4
Q ss_pred CCCCEEEHHHCC-CCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 678801131144-4079999999999873884899737989899999999999986389879999970678864134555
Q T0573 4 SAIDPVSFSLYA-KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFG 82 (311)
Q Consensus 4 ~~iP~IDls~~~-~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~~~~rGy~~~~ 82 (311)
.+||||||+.+. .|+++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++......++||.+..
T Consensus 2 ~~iPvIDls~l~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~eli~~~~~~~~~FF~lP~e~K~k~~~~~~~~~g~~~~~ 81 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV 81 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99983888468997899999999999970938999908989999999999999987062777656522577767754324
Q ss_pred CEECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 30035666520000011045556663220013665674432144899999999999999988899986328880135786
Q T0573 83 VETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPT 162 (311)
Q Consensus 83 ~e~~~~~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~ 162 (311)
...|++|.|.++... ....+.||+.+++|++.+++|+++|.+|+.+|+++++++||+++++|.+.
T Consensus 82 -------~~~d~~E~~~~~~~~--------~~~~~~~p~~~~~f~~~~~~y~~~~~~L~~~ll~~la~~Lgl~~~~f~~~ 146 (319)
T 1w9y_A 82 -------TDMDWESTFFLKHLP--------ISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNA 146 (319)
T ss_dssp -------GGCCCCEEEEEEEES--------CCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred -------CCCCHHHCCCCCCCC--------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf -------522100012445433--------45756687665677899999998876636779999998719976678876
Q ss_pred HC---CCCHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCC-CCCCEEEECCCCEEEEEECCCCEEEECHHHHHHCC
Q ss_conf 52---773010322035657631017756888864389984157-78621352388458863179717987113453304
Q T0573 163 VQ---DGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAE-EGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLT 238 (311)
Q Consensus 163 ~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTll~qd~-~~GLqv~~~~g~W~~V~p~~~~liVniGd~l~~~T 238 (311)
+. ...+.+|++||||+++++...|+++|||+|+||||+||+ +|||||. ++|+|++|+|.||++|||+||+||+||
T Consensus 147 ~~~~~~~~~~lr~~~yP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~ggl~v~-~~g~Wi~v~p~~g~~vVNvGD~l~~~T 225 (319)
T 1w9y_A 147 FYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVIT 225 (319)
T ss_dssp HHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHT
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCEEEEE-CCCCEEEECCCCCEEEEEHHHHHHHHH
T ss_conf 4133344402344779999753334211035555434442024652027995-199679823788668996357788875
Q ss_pred CCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCHHHCC---CCCCCCCCCCCCHHHHHHH
Q ss_conf 8865057205632754435775148887426899976715065428---8777667885018999999
Q T0573 239 NNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVT---AENPDRYPESITADEFLQQ 303 (311)
Q Consensus 239 nG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~---~~~~~~~~~~~t~~e~~~~ 303 (311)
||+||||+|||+.++ +.+|||++||++|+.|++|.|+|+|++ +++|++| +++|++||++.
T Consensus 226 ng~~~St~HRVv~~~----~~~R~Si~~F~~P~~d~~i~plp~~v~~~~~~~p~~y-~p~t~~eyl~~ 288 (319)
T 1w9y_A 226 NGKYKSVMHRVIAQK----DGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVY-PKFVFDDYMKL 288 (319)
T ss_dssp TTSSCCCCEEECCCS----SSCCEEEEEEEECCTTCEECCCGGGC--------CCC-CCEEHHHHHHT
T ss_pred CCCCCCCCCEECCCC----CCCEEEEEEEEECCCCCEEECCHHHHCCCCCCCCCCC-CCCCHHHHHHH
T ss_conf 786778785031799----9986899999727999889788788325476577789-98439999999
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=0 Score=518.10 Aligned_cols=291 Identities=23% Similarity=0.369 Sum_probs=250.0
Q ss_pred CCCCCEEEHHHCCCC----HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC--CCCC
Q ss_conf 667880113114440----7999999999987388489973798989999999999998638987999997067--8864
Q T0573 3 TSAIDPVSFSLYAKD----FTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GGAR 76 (311)
Q Consensus 3 ~~~iP~IDls~~~~d----~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~--~~~r 76 (311)
..+||+|||+.+.++ +++++++|.+||+++|||||+||||+.+++++++++++.||+||.|+|++|.... +.++
T Consensus 44 ~~~IPvIDls~l~s~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~e~K~k~~~~~~~g~~~ 123 (356)
T 1gp6_A 44 GPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQ 123 (356)
T ss_dssp SCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCS
T ss_pred CCCCCEEECHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCCC
T ss_conf 89898788856448998999999999999998190899981898999999999999999829988601101025688756
Q ss_pred CCCCCCCEECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 13455530035666520000011045556663220013665674432144899999999999999988899986328880
Q T0573 77 GYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER 156 (311)
Q Consensus 77 Gy~~~~~e~~~~~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 156 (311)
||.+...+.... ..|.++.|. ....+ ......|+||+.+|+|++.+++|++.|..++.+|+++|+++||+++
T Consensus 124 G~~~~~~~~~~~--~~~~~~~~~-~~~~~-----~~~~~~n~wp~~~p~Fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~ 195 (356)
T 1gp6_A 124 GYGSKLANNASG--QLEWEDYFF-HLAYP-----EEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEP 195 (356)
T ss_dssp EEECCCCCSTTC--CCCSCEEEE-EEEES-----GGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred CCCCCCCCCCCC--CCHHHHHHC-CCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 756544444445--200333211-46786-----2001333587774677888789999999999999999999731410
Q ss_pred HHHHHHHCC---CCHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCCEEEECHHH
Q ss_conf 135786527---73010322035657631017756888864389984157786213523884588631797179871134
Q T0573 157 DFFKPTVQD---GNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDM 233 (311)
Q Consensus 157 ~~f~~~~~~---~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTll~qd~~~GLqv~~~~g~W~~V~p~~~~liVniGd~ 233 (311)
++|.+.+.. ..+.+|++|||+++.++..+|+++|||+|+||||+|+.++||||+ ++|+|++|+|.||++|||+||+
T Consensus 196 ~~~~~~~~~~~~~~~~lr~~~yP~~~~~~~~~g~~~HtD~g~lTlL~q~~~ggLqv~-~~g~W~~V~p~~g~~vVnvGD~ 274 (356)
T 1gp6_A 196 DRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDT 274 (356)
T ss_dssp THHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE-CCCCEEECCCCCCCEEEEHHHH
T ss_conf 345554314667320110146763222435777205789982332024663520231-4896687889998656638899
Q ss_pred HHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEE-ECCHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 5330488650572056327544357751488874268999767-1506542887776678850189999999998
Q T0573 234 LERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEI-KTLQNCVTAENPDRYPESITADEFLQQRLRE 307 (311)
Q Consensus 234 l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p~~d~~i-~p~~~~~~~~~~~~~~~~~t~~e~~~~r~~~ 307 (311)
||+||||+||||+|||+.|+ +.+|||++||++|+.|++| .|+|+|+.+++|++| +++|++||+++|+..
T Consensus 275 l~~~TnG~~kst~HRVv~~~----~~~R~S~~~F~~p~~d~~v~~plp~~~~~~~p~~y-~~it~~e~l~~rl~~ 344 (356)
T 1gp6_A 275 LEILSNGKYKSILHRGLVNK----EKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKF-PPRTFAQHIEHKLFG 344 (356)
T ss_dssp HHHHTTTSSCCCCEEECCCS----SCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSS-CCEEHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCC----CCCEEEEEEEECCCCCCEECCCCHHHCCCCCCCCC-CCCCHHHHHHHHHHH
T ss_conf 99993994348777234899----99868999984389866245687775398887678-970299999999986
No 3
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=0 Score=484.29 Aligned_cols=298 Identities=22% Similarity=0.324 Sum_probs=242.8
Q ss_pred CCCCCCCEEEHHHCCC----CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC--CC
Q ss_conf 9766788011311444----07999999999987388489973798989999999999998638987999997067--88
Q T0573 1 MSTSAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GG 74 (311)
Q Consensus 1 ms~~~iP~IDls~~~~----d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~--~~ 74 (311)
|+.++||+|||+.+.+ .+++++++|.+||+++|||||+||||+.++++++.+ +.||.+|.|+|.++.... ..
T Consensus 4 ~~~~~IPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GFf~l~NHGI~~~~l~~a~~--~f~~~l~~eeK~~~~~~~~~~~ 81 (331)
T 1odm_A 4 VSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGINVQRLSQKTK--EFHMSITPEEKWDLAIRAYNKE 81 (331)
T ss_dssp CCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCCCHHHHHHHHH--HHHHHCCHHHHHHHBCTTTCTT
T ss_pred CCCCCCCEEECHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHH--HHCCCCCHHHHHHHHHCCCCCC
T ss_conf 87899883887441598989999999999999876848999959989999999999--8734588888777520123556
Q ss_pred CCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCC----CHHHCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64134555300356665200000110455566632----2001366567443--21448999999999999999888999
Q T0573 75 ARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHR----FRAHMADNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAI 148 (311)
Q Consensus 75 ~rGy~~~~~e~~~~~~~~D~~E~~~~~~~~~~~~~----~~~~~~~n~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~l 148 (311)
.++|.+.+.+... .+..+.++++....+..+... ......+|+||.+ +|+|++.+++|+++|.+|+.+||+++
T Consensus 82 ~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~p~fr~~~~~y~~~~~~La~~ll~~l 160 (331)
T 1odm_A 82 HQDQVRAGYYLSI-PGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGY 160 (331)
T ss_dssp CTTCSSSEEECCB-TTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCC-CCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6776665641157-876422121003545576542000047653454586544686899999999999999878888778
Q ss_pred HHHCCCCHHHHHHHHCC--CCHHHHHHHCCCC---CCC-------HHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCE
Q ss_conf 86328880135786527--7301032203565---763-------10177568888643899841577862135238845
Q T0573 149 ATYLKLERDFFKPTVQD--GNSVLRLLHYPPI---PKD-------ATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQW 216 (311)
Q Consensus 149 a~~Lgl~~~~f~~~~~~--~~~~lr~~~Yp~~---~~~-------~~~~~~~~HtD~g~lTll~qd~~~GLqv~~~~g~W 216 (311)
+++||+++++|.+.+.. +.+.+|++|||+. +++ ...+|+++|||+|+||||+||+++||||++.+| |
T Consensus 161 a~~Lgl~~~~~~~~~~~~~~~~~lrll~yp~~~~~p~~~~~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqv~~~~~-W 239 (331)
T 1odm_A 161 ALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAG-Y 239 (331)
T ss_dssp HHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETTE-E
T ss_pred HHHHCCCHHHHHHHHHCCCCCCHHHEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCC-C
T ss_conf 876253077999986245630033413102569986121034434677654477770018882037755167984588-2
Q ss_pred EEEEECCCCEEEECHHHHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCHHHCCCCCCCCCCCCCC
Q ss_conf 88631797179871134533048865057205632754435775148887426899976715065428877766788501
Q T0573 217 LPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESIT 296 (311)
Q Consensus 217 ~~V~p~~~~liVniGd~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~~~~~~~~~t 296 (311)
++|+|.||++|||+||+||+||||+||||+|||+.|. .+|||++||++|+.|++|+|+++++. +++..| +++|
T Consensus 240 ~~v~~~~~~~vVn~Gd~l~~~Tng~~~st~HRV~~~~-----~~R~Si~~F~~p~~d~~i~pl~~~~~-~~~~~~-~~~~ 312 (331)
T 1odm_A 240 QDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVN-----AERQSLPFFVNLGYDSVIDPFDPREP-NGKSDR-EPLS 312 (331)
T ss_dssp EECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCC-----SCEEEEEEEECCCTTCBCCCCCTTST-TCCCSS-CCCB
T ss_pred EEECCCCCEEEEEHHHHHHHHHCCCCCCCCCEECCCC-----CCEEEEEEEECCCCCCEEECCCCCCC-CCCCCC-CCCC
T ss_conf 4616887479998668999996992318885367999-----98789999865899978957765687-887768-9831
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 8999999999853
Q T0573 297 ADEFLQQRLREIK 309 (311)
Q Consensus 297 ~~e~~~~r~~~~~ 309 (311)
++||+++||+++.
T Consensus 313 ~~e~~~~rl~~~~ 325 (331)
T 1odm_A 313 YGDYLQNGLVSLI 325 (331)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreductase, antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=0 Score=487.61 Aligned_cols=290 Identities=19% Similarity=0.288 Sum_probs=245.1
Q ss_pred CCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC--CCCCCCCC
Q ss_conf 6678801131144407999999999987388489973798989999999999998638987999997067--88641345
Q T0573 3 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GGARGYIP 80 (311)
Q Consensus 3 ~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~--~~~rGy~~ 80 (311)
.++||||||+.+.+... .++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.... ..+|||++
T Consensus 2 ~~~iPvIDl~~l~~~~~--~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~k~~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 2 DTTVPTFSLAELQQGLH--QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCCCEEEHHHHHTTCS--HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCCCCEEECCCCCCCCH--HHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99988588801379768--9999999970908999918989999999999999998599999987623754567765077
Q ss_pred CCCEECCCC----CCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 553003566----6520000011045556663220013665674432144899999999999999988899986328880
Q T0573 81 FGVETAKGA----DHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER 156 (311)
Q Consensus 81 ~~~e~~~~~----~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 156 (311)
.+.|..... ...|++|+|.++ ..+|+||. ++|++.+.+|+++|.+++.+|+++|+++||+++
T Consensus 80 ~~~e~~~~~~~~~~~~d~~~~~~~~------------~~~n~wP~--~~~~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~ 145 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMG------------TADNLFPS--GDFERIWTQYFDRQYTASRAVAREVLRATGTEP 145 (311)
T ss_dssp C-----------------CEEEEEC------------SSSCCCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCEECCCCCCCCCCCCHHHHCCCC------------CCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 6660214545855555134420346------------67767877--227999999999999999999999999849983
Q ss_pred HHHHHHHCCCCHHHHHHHCCCCCC----CHHCCCCCCCCCCCEEEEEECCCCCC----CEEEECCCCEEEEEECCCCEEE
Q ss_conf 135786527730103220356576----31017756888864389984157786----2135238845886317971798
Q T0573 157 DFFKPTVQDGNSVLRLLHYPPIPK----DATGVRAGAHGDINTITLLLGAEEGG----LEVLDRDGQWLPINPPPGCLVI 228 (311)
Q Consensus 157 ~~f~~~~~~~~~~lr~~~Yp~~~~----~~~~~~~~~HtD~g~lTll~qd~~~G----Lqv~~~~g~W~~V~p~~~~liV 228 (311)
++|.+.+.++.+.+|++|||||+. ++..+|+++|||+|+||||+||+++| ||+. .+|+|++|+|.||++||
T Consensus 146 ~~~~~~~~~~~~~lrl~~Yp~~p~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~gg~~~Lq~~-~~g~W~~V~p~p~~lvV 224 (311)
T 1dcs_A 146 DGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAE-VGGAFTDLPYRPDAVLV 224 (311)
T ss_dssp TTCHHHHHSCCCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEE-ETTEEEECCCCTTCEEE
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCEEEEEEC-CCCEEEECCCCCCCEEE
T ss_conf 15678640666104556338996346798774465346587746999861679964667506-89959983688985799
Q ss_pred ECHHHHHHCCCCEEECCCCEEECCCCCC-CCCCCEEEEEECCCCCCCEEEC-CHHHCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 7113453304886505720563275443-5775148887426899976715-0654288777667885018999999999
Q T0573 229 NIGDMLERLTNNVLPSTVHRVVNPPPER-RGVPRYSTPFFLHFASDYEIKT-LQNCVTAENPDRYPESITADEFLQQRLR 306 (311)
Q Consensus 229 niGd~l~~~TnG~~ks~~HRV~~p~~~~-~~~~R~S~~~F~~p~~d~~i~p-~~~~~~~~~~~~~~~~~t~~e~~~~r~~ 306 (311)
|+||+||+||||+|||++|||++|+..+ .+.+|||++||++|+.|++|.| ++..+..+.+..+ +..++.+|+.+.+-
T Consensus 225 nvGD~L~~~TnG~~ks~~HRVv~p~~~~~~~~~R~Si~~F~~P~~d~~i~pp~~~~~~~~~~~~~-~~~~~~~~~~~~y~ 303 (311)
T 1dcs_A 225 FCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFSVPLARECGFDVSLDG-ETATFQDWIGGNYV 303 (311)
T ss_dssp EECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEEHHHHHHTTCCCCCCS-SEEEHHHHHCSSCC
T ss_pred EHHHHHHHHCCCEECCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEECCCCHHHCCCCCCCCC-CCCCHHHHHHHHHH
T ss_conf 76278898869963286866747865567898758999997179997878875332266777778-88777788899999
Q ss_pred HHCC
Q ss_conf 8537
Q T0573 307 EIKL 310 (311)
Q Consensus 307 ~~~~ 310 (311)
++|.
T Consensus 304 ~~r~ 307 (311)
T 1dcs_A 304 NIRR 307 (311)
T ss_dssp CEEC
T ss_pred HHHH
T ss_conf 9997
No 5
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2g19_A*
Probab=96.04 E-value=0.093 Score=31.12 Aligned_cols=35 Identities=17% Similarity=0.202 Sum_probs=27.7
Q ss_pred HHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999999987388489973798989999999999998
Q T0573 22 AQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAF 57 (311)
Q Consensus 22 ~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~f 57 (311)
++.|.+++.+.|++.| ..-++.++++++.+....+
T Consensus 16 ~~~i~~~L~~~Gy~VI-DnFL~~e~~~~L~~e~~~l 50 (247)
T 2hbt_A 16 LEYIVPCMNKHGICVV-DDFLGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHTHHHHHHHTSEEEE-SSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEE-CCCCCHHHHHHHHHHHHHH
T ss_conf 9999999873999999-9989999999999999878
No 6
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, joint center for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.39 E-value=0.024 Score=35.25 Aligned_cols=80 Identities=28% Similarity=0.352 Sum_probs=50.0
Q ss_pred HHHHHHHCCCCCCCHHCCCCCCCCCCC-------------EEEEEECC--C-CCC-CEEEECCCCEEEEEECCCCEEEEC
Q ss_conf 010322035657631017756888864-------------38998415--7-786-213523884588631797179871
Q T0573 168 SVLRLLHYPPIPKDATGVRAGAHGDIN-------------TITLLLGA--E-EGG-LEVLDRDGQWLPINPPPGCLVINI 230 (311)
Q Consensus 168 ~~lr~~~Yp~~~~~~~~~~~~~HtD~g-------------~lTll~qd--~-~~G-Lqv~~~~g~W~~V~p~~~~liVni 230 (311)
..+++++|.+ +-..++|+|.+ ++|+.+.+ + .|| |.+...++ -..|+|.+|.+|+.-
T Consensus 99 ~~~~~~~Y~~------G~~y~~H~D~~~~~~~~~~~r~~~s~~i~Ln~p~~yeGGel~~~~~~~-~~~vk~~~G~~viFp 171 (243)
T 3dkq_A 99 YPPLFNRYQG------GETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-QQSIKLSAGSLVLYP 171 (243)
T ss_dssp EEEEEEEECT------TCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-EEEECCCTTCEEEEE
T ss_pred CCCEEEEECC------CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCC-CEEEECCCCCEEECC
T ss_conf 5627999893------987388724674545667863249999997488448997699955998-579846999889649
Q ss_pred HHHHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCC
Q ss_conf 1345330488650572056327544357751488874268
Q T0573 231 GDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHF 270 (311)
Q Consensus 231 Gd~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p 270 (311)
+. .+|||. |.. ...|++++++..-
T Consensus 172 s~------------~~H~V~-pVt---~G~R~~~~~Wi~s 195 (243)
T 3dkq_A 172 SS------------SLHQVT-PVL---SGERTAAFMWLQS 195 (243)
T ss_dssp TT------------SEEEEC-CEE---EECEEEEEEEEEE
T ss_pred CC------------CEEEEE-ECC---CCCEEEEEEEHHH
T ss_conf 99------------847420-045---2418999992785
No 7
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=94.69 E-value=0.25 Score=28.17 Aligned_cols=83 Identities=22% Similarity=0.161 Sum_probs=51.6
Q ss_pred HHHHCCCCCCCHHCCCCCCCCCCC--------EEEEEECCCCCCCEEEE----------CCCCEEEEEECCCCEEEECHH
Q ss_conf 322035657631017756888864--------38998415778621352----------388458863179717987113
Q T0573 171 RLLHYPPIPKDATGVRAGAHGDIN--------TITLLLGAEEGGLEVLD----------RDGQWLPINPPPGCLVINIGD 232 (311)
Q Consensus 171 r~~~Yp~~~~~~~~~~~~~HtD~g--------~lTll~qd~~~GLqv~~----------~~g~W~~V~p~~~~liVniGd 232 (311)
-+|+|.. ..-++++|.|-- ..+|-+-.. --++++. ..++++.++-.+|+++|.-|+
T Consensus 129 lln~Y~~-----g~d~Ig~H~D~e~~l~~~~~IaslSlG~~-r~f~fr~k~~~~~~~~~~~~~~~~i~L~~gsLlvM~g~ 202 (238)
T 2iuw_A 129 LCNLYRN-----EKDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGA 202 (238)
T ss_dssp EEEEECS-----TTCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEEET
T ss_pred EEEEEEC-----CCCCCCCCCCCHHHCCCCCCEEEEECCCC-EEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEECCC
T ss_conf 7998724-----77653244267456177885689835995-89998813676567766777218998799988996910
Q ss_pred HHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEECC
Q ss_conf 4533048865057205632754435775148887426
Q T0573 233 MLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLH 269 (311)
Q Consensus 233 ~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~ 269 (311)
+=..|. |.|- +.......|+|+.|=.-
T Consensus 203 ~q~~~~--------H~Ip--k~~~~~~~RISLTFR~v 229 (238)
T 2iuw_A 203 TQADWQ--------HRVP--KEYHSREPRVNLTFRTV 229 (238)
T ss_dssp HHHHEE--------EEEC--CCSSCCCCEEEEEEECC
T ss_pred HHCCCC--------CCCC--CCCCCCCCEEEEEEEEE
T ss_conf 318248--------6687--76899999799997457
No 8
>3h8r_A Alpha-ketoglutarate-dependent dioxygenase ALKB homolog 2; protein-DNA complex, dioxygenase, DNA damage, DNA repair, iron, metal-binding, nucleus; HET: 6MA; 1.77A {Homo sapiens} PDB: 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* 3bty_A* 3buc_A*
Probab=94.15 E-value=0.14 Score=29.97 Aligned_cols=85 Identities=15% Similarity=0.133 Sum_probs=53.2
Q ss_pred HHHHHHCCCCCCCHHCCCCCCCCCCC--------EEEEEECCCCCCCEEEE---------CCCCEEEEEECCCCEEEECH
Q ss_conf 10322035657631017756888864--------38998415778621352---------38845886317971798711
Q T0573 169 VLRLLHYPPIPKDATGVRAGAHGDIN--------TITLLLGAEEGGLEVLD---------RDGQWLPINPPPGCLVINIG 231 (311)
Q Consensus 169 ~lr~~~Yp~~~~~~~~~~~~~HtD~g--------~lTll~qd~~~GLqv~~---------~~g~W~~V~p~~~~liVniG 231 (311)
.+-+|+|.+ +.-++++|+|.- .+||-+... --+++.. ..++++.++-.+|+++|.-|
T Consensus 103 ~~liN~Y~~-----g~~~i~~H~D~~~~~~~~~~I~slSlG~~-r~f~~r~~~~~~~~~~~~~~~~~~~L~~gsllvM~g 176 (209)
T 3h8r_A 103 FVLINRYKD-----GSDHIGEHRDDCRELAPGSPIASVSFGAS-RDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 176 (209)
T ss_dssp EEEEEEESS-----TTCCEEEECCCCSSBCTTCCEEEEEEESC-EEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEECT
T ss_pred EEEEEEECC-----CCCCCCCCCCCHHHCCCCCCEEEEECCCC-EEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEECC
T ss_conf 899998717-----76546564587555467984799965880-799986504766666677731799879998899780
Q ss_pred HHHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEECC
Q ss_conf 34533048865057205632754435775148887426
Q T0573 232 DMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLH 269 (311)
Q Consensus 232 d~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~ 269 (311)
++=..|+ |.|. +.......|+|+.|=.-
T Consensus 177 ~~q~~~~--------H~Vp--~~~~~~~~RISlTFR~v 204 (209)
T 3h8r_A 177 PTNTHWY--------HSLP--VRKKVLAPRVNLTFRKI 204 (209)
T ss_dssp THHHHEE--------EEEC--CCTTCCSCEEEEEEECB
T ss_pred CHHCCCE--------ECCC--CCCCCCCCEEEEEECEE
T ss_conf 0017348--------6246--77899998899890560
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protein; double-stranded beta helix, alpha- ketoglutarate dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=83.92 E-value=2 Score=21.79 Aligned_cols=56 Identities=16% Similarity=0.168 Sum_probs=33.8
Q ss_pred CCCCEEEECCCCEEEEEECCCCEEEECHHHHHHCCCCE-EECCCCEEECCCCCCCCCCCEEEEEECC
Q ss_conf 78621352388458863179717987113453304886-5057205632754435775148887426
Q T0573 204 EGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNV-LPSTVHRVVNPPPERRGVPRYSTPFFLH 269 (311)
Q Consensus 204 ~~GLqv~~~~g~W~~V~p~~~~liVniGd~l~~~TnG~-~ks~~HRV~~p~~~~~~~~R~S~~~F~~ 269 (311)
.||.-+....+ +.|+|..|.+|+.-. .|++|. =..++|||..... ..|||++.+++
T Consensus 155 eGG~t~F~~~~--~~i~pkkG~~iiFps----~~~~~~~d~~~~H~v~pV~~----G~Ky~l~~W~~ 211 (216)
T 3itq_A 155 EGGETFFPKLN--LSVHPRKGMAVYFEY----FYQDQSLNELTLHGGAPVTK----GEKWIATQWVR 211 (216)
T ss_dssp EECCEEETTTT--EEECCCTTCEEEEEC----CCSSHHHHHTTCEEECCEEE----SCEEEEEEEEE
T ss_pred CCCCEEECCCC--EEEECCCCEEEEEEC----CCCCCCCCCCCCCCCCCCCC----CCEEEEEEEEC
T ss_conf 89327865898--377368773999625----67788888875247885564----88999998167
No 10
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=75.76 E-value=2.7 Score=20.93 Aligned_cols=55 Identities=13% Similarity=0.137 Sum_probs=41.8
Q ss_pred CCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 6678801131144407999999999987388489973798989999999999998638
Q T0573 3 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFAL 60 (311)
Q Consensus 3 ~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~l 60 (311)
.+-||.|+|+.+.+. .+-++..+.+++.||..|.| =||.+.+.+......+|.+.
T Consensus 98 ~~iIP~i~f~di~~~--~~~~e~~~~ikrrG~vVIR~-V~p~e~a~~w~~ei~~Yle~ 152 (461)
T 2dbn_A 98 DAVWPVLSYADIKAG--HVTAEQREQIKRRGCAVIKG-HFPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp CCSSCEEEHHHHHHT--CCCHHHHHHHHHHSEEEEET-SSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEHHHHHCC--CCCHHHHHHHHHCCEEEECC-CCCHHHHHHHHHHHHHHHHH
T ss_conf 998606558984068--89999999998639999899-79999999999999999983
No 11
>2opi_A L-fuculose-1-phosphate aldolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=63.99 E-value=3 Score=20.64 Aligned_cols=16 Identities=13% Similarity=0.183 Sum_probs=9.8
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 9899999999999986
Q T0573 43 DQARIDAAVDSAKAFF 58 (311)
Q Consensus 43 ~~~li~~~~~~~~~fF 58 (311)
-.+.++++.+.+++.+
T Consensus 3 ~~e~~~~~~~~~~~~~ 18 (212)
T 2opi_A 3 TDEHIELFLAQAHRYG 18 (212)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
T ss_conf 4899999999999983
No 12
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=59.42 E-value=3.5 Score=20.17 Aligned_cols=13 Identities=8% Similarity=0.092 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 7999999999987
Q T0573 18 FTRFAQELGASFE 30 (311)
Q Consensus 18 ~~~~~~~l~~A~~ 30 (311)
+.++.++|.++|+
T Consensus 3 ~~~l~~~l~~~~r 15 (215)
T 1e4c_P 3 RNKLARQIIDTCL 15 (215)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 8999999999999
No 13
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=58.03 E-value=8.6 Score=17.44 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=33.2
Q ss_pred CCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 6678801131144407999999999987388489973798989999999999998
Q T0573 3 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAF 57 (311)
Q Consensus 3 ~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~f 57 (311)
.+.=.-+|.+.+..|. ++|.+-+++.||+.|.| -++.+.++++.+.....
T Consensus 6 ~~~~~~~d~~~~~~d~----~~l~~~f~~dGyvvl~n-~l~~~~i~~l~~~i~~~ 55 (288)
T 2rdq_A 6 NVTGDYTDCTPLLGDR----AALDSFYEEHGYLFLRN-VLDRDLVKTVAEQMREG 55 (288)
T ss_dssp CCCBCCCCCGGGTTCH----HHHHHHHHHHSEEEECS-CSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCH----HHHHHHHHHCCEEECCC-CCCHHHHHHHHHHHHHH
T ss_conf 6776755477789999----99999998499898259-67999999999999999
No 14
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=52.57 E-value=5.9 Score=18.60 Aligned_cols=16 Identities=13% Similarity=-0.043 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 8999999999999863
Q T0573 44 QARIDAAVDSAKAFFA 59 (311)
Q Consensus 44 ~~li~~~~~~~~~fF~ 59 (311)
+|+++++.+.++.++.
T Consensus 4 ~e~~~el~~~~~~l~~ 19 (238)
T 1pvt_A 4 RETIREIQKVAYWLAI 19 (238)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999998
No 15
>3ms5_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, gamma-butyrobetaine,2-oxogl dioxygenase 1, structural genomics; HET: OGA REE; 1.82A {Homo sapiens}
Probab=50.27 E-value=11 Score=16.60 Aligned_cols=46 Identities=11% Similarity=0.111 Sum_probs=30.5
Q ss_pred CCCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHH
Q ss_conf 76678801131144407999999999987388489973798989999
Q T0573 2 STSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARID 48 (311)
Q Consensus 2 s~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~ 48 (311)
....+|.+|+....++.. ...+...|+.++||..+.|-....+.+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~-~l~~~l~~l~~~G~~~v~~~p~~~~~~~ 164 (388)
T 3ms5_A 119 SELQLPTLDFEDVLRYDE-HAYKWLSTLKKVGIVRLTGASDKPGEVS 164 (388)
T ss_dssp TTCCCCEEEHHHHHHCHH-HHHHHHHHHHHHSEEEEECCCSSTTHHH
T ss_pred HHCCCCCCCHHHHCCCCH-HHHHHHHHHHEEEEEEECCCCCCCHHHH
T ss_conf 312676433677636728-8999987653330365048987405677
No 16
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, metal-binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3khb_A* 3khc_A* 3bie_A* 3bi3_A* 3bkz_A*
Probab=46.40 E-value=13 Score=16.20 Aligned_cols=86 Identities=17% Similarity=0.215 Sum_probs=45.7
Q ss_pred CCHHHHHHHCCCCCCCHHCCCCCCCCC-----CC--EEEEEECCCCCC-CEEE--ECCCCEEEEEECCCCEEEECHHHHH
Q ss_conf 730103220356576310177568888-----64--389984157786-2135--2388458863179717987113453
Q T0573 166 GNSVLRLLHYPPIPKDATGVRAGAHGD-----IN--TITLLLGAEEGG-LEVL--DRDGQWLPINPPPGCLVINIGDMLE 235 (311)
Q Consensus 166 ~~~~lr~~~Yp~~~~~~~~~~~~~HtD-----~g--~lTll~qd~~~G-Lqv~--~~~g~W~~V~p~~~~liVniGd~l~ 235 (311)
.++.+ +|+|++- -++++|-| ++ .++|-+.+ ++ ..+. .+++.+..+.-.+|+++|.-|++ +
T Consensus 104 pd~~l-vN~Y~~g------~~~~~h~dddE~~~~~~IvSlSLG~--~~~f~f~~~~~~~~~~~~~L~~gdllvm~G~~-r 173 (211)
T 3i3q_A 104 PDACL-INRYAPG------AKLSLHQDKDEPDLRAPIVSVSLGL--PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-R 173 (211)
T ss_dssp CCEEE-EEEECTT------CCEEEECCCCCSCTTSCEEEEEEES--CEEEEECCSSTTSCCEEEEECTTCEEEECGGG-T
T ss_pred CCEEE-EEEECCC------CCCCCCEECCCCCCCCCEEEEECCC--CEEEEEEECCCCCEEEEEECCCCCEEEECCHH-H
T ss_conf 88799-9876799------9850776897001289708897689--86999875368971478975999989978538-7
Q ss_pred HCCCCEEECCCCEEECCCC---CCCCCCCEEEEEECC
Q ss_conf 3048865057205632754---435775148887426
Q T0573 236 RLTNNVLPSTVHRVVNPPP---ERRGVPRYSTPFFLH 269 (311)
Q Consensus 236 ~~TnG~~ks~~HRV~~p~~---~~~~~~R~S~~~F~~ 269 (311)
.|. |.|-.-.. ......|+|+.|=-.
T Consensus 174 ~~~--------H~V~~~~~~~~~~~~~~RinlTfR~~ 202 (211)
T 3i3q_A 174 LFY--------HGIQPLKAGFHPLTIDCRYNLTFRQA 202 (211)
T ss_dssp TCC--------EEECCCCCCCBTTTBTCEEEEEEECC
T ss_pred HEE--------ECCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 308--------26885047877788998788998704
No 17
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti MAFF303099}
Probab=42.18 E-value=15 Score=15.77 Aligned_cols=15 Identities=40% Similarity=0.399 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHCCC
Q ss_conf 899999999985379
Q T0573 297 ADEFLQQRLREIKLA 311 (311)
Q Consensus 297 ~~e~~~~r~~~~~~a 311 (311)
.+.+..+|++...||
T Consensus 256 ~w~~w~~~~r~~g~~ 270 (270)
T 2z7b_A 256 GWNHWSQRLRQAGLA 270 (270)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 899999999865799
No 18
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=37.72 E-value=11 Score=16.67 Aligned_cols=14 Identities=0% Similarity=0.083 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999986
Q T0573 45 ARIDAAVDSAKAFF 58 (311)
Q Consensus 45 ~li~~~~~~~~~fF 58 (311)
..++++.++++.++
T Consensus 8 ~~v~~~~~~~~~~~ 21 (274)
T 2v9l_A 8 WFVQGMIKATTDAW 21 (274)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 19
>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}
Probab=36.72 E-value=18 Score=15.20 Aligned_cols=41 Identities=22% Similarity=0.386 Sum_probs=30.9
Q ss_pred HHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCC
Q ss_conf 10177568888643899841577862135238845886317971
Q T0573 182 ATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGC 225 (311)
Q Consensus 182 ~~~~~~~~HtD~g~lTll~qd~~~GLqv~~~~g~W~~V~p~~~~ 225 (311)
...+|.+|-+++..|+.|.... -++|...++.|..|.. .|.
T Consensus 10 ~lNvR~~P~~~s~ii~~l~~g~--~v~v~~~~~~W~~V~~-~g~ 50 (74)
T 2krs_A 10 ALNMRSGPGSNYGVIGTLRNND--KVEIIKEVDGWYEIRF-NGK 50 (74)
T ss_dssp EEEEESSSSTTTCEEEEEETTC--EEEEEEEETTEEEEEE-TTE
T ss_pred CEEEECCCCCCCHHHEEECCCC--EEEEEEEECCEEEEEE-CCE
T ss_conf 8999699999996769997998--9999999899999999-998
No 20
>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens}
Probab=30.98 E-value=22 Score=14.58 Aligned_cols=39 Identities=23% Similarity=0.375 Sum_probs=30.4
Q ss_pred HHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEC
Q ss_conf 10177568888643899841577862135238845886317
Q T0573 182 ATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPP 222 (311)
Q Consensus 182 ~~~~~~~~HtD~g~lTll~qd~~~GLqv~~~~g~W~~V~p~ 222 (311)
...+|.+|.++...|+.|.... -++|...+|.|..|...
T Consensus 12 ~lNvR~~pst~s~ii~~l~~G~--~v~v~~~~~~W~kV~~~ 50 (76)
T 2kt8_A 12 SLNVREGASTSSKVIGSLSGNT--KVTIVGEEGAFYKIEYK 50 (76)
T ss_dssp CEEEESSSSTTSCEEEEECTTC--EEEEEEEETTEEEEEET
T ss_pred CEEEECCCCCCCHHHEEECCCC--EEEEEEEECCEEEEEEC
T ss_conf 8999799999987889996999--99999998999999989
No 21
>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}
Probab=28.23 E-value=23 Score=14.41 Aligned_cols=41 Identities=24% Similarity=0.384 Sum_probs=30.2
Q ss_pred CCCHHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEE
Q ss_conf 7631017756888864389984157786213523884588631
Q T0573 179 PKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINP 221 (311)
Q Consensus 179 ~~~~~~~~~~~HtD~g~lTll~qd~~~GLqv~~~~g~W~~V~p 221 (311)
..+...+|.+|-+++..++.|.... =++|....|.|..|..
T Consensus 8 t~~~lNvR~~P~t~~~ii~~l~~g~--~v~v~~~~~~W~~V~~ 48 (70)
T 2kq8_A 8 NASALNVRSGEGTNYRIIGALPQGQ--KVQVISENSGWSKINY 48 (70)
T ss_dssp CCSSSCSSSSSSSCTTSCCCCCSSS--SCCCCEEETTEEEEEE
T ss_pred ECCEEEEECCCCCCCHHHEEECCCC--EEEEEEEECCEEEEEE
T ss_conf 5899999899999987989998999--9999998087999999
No 22
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridges, hormone/growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=27.62 E-value=25 Score=14.19 Aligned_cols=18 Identities=17% Similarity=0.152 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHCCEEEE
Q ss_conf 999999999873884899
Q T0573 20 RFAQELGASFERYGFAVL 37 (311)
Q Consensus 20 ~~~~~l~~A~~~~Gff~l 37 (311)
.+.+.|.-.|.+-||||.
T Consensus 10 hLVeaLylvCg~~Gffy~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHCCCCEEEC
T ss_conf 899999999646855307
No 23
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus HB8} PDB: 2flf_A
Probab=27.34 E-value=25 Score=14.16 Aligned_cols=15 Identities=20% Similarity=0.158 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999999863
Q T0573 45 ARIDAAVDSAKAFFA 59 (311)
Q Consensus 45 ~li~~~~~~~~~fF~ 59 (311)
++...+...+|.+|+
T Consensus 4 ~~~~~~~~igr~l~~ 18 (200)
T 2fk5_A 4 RLYAAFRQVGEDLFA 18 (200)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999998
No 24
>2rg4_A Uncharacterized protein; rhodobacterales, Q2CBJ1_9RHOB, structural genomics, PSI-2 protein structure initiative; 1.90A {Oceanicola granulosus HTCC2516} PDB: 3bvc_A
Probab=27.01 E-value=26 Score=14.12 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=27.4
Q ss_pred EEEEEECCCCEEEECHHHHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEEC
Q ss_conf 58863179717987113453304886505720563275443577514888742
Q T0573 216 WLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFL 268 (311)
Q Consensus 216 W~~V~p~~~~liVniGd~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~ 268 (311)
...|+|.+|.||+.-+.+ .|+|-.. ....+|+|++|=+
T Consensus 168 ~~~~~p~eG~liiFPS~L------------~H~V~~n---~s~~~RisiSfN~ 205 (216)
T 2rg4_A 168 FRSVAPKVGDVLLWESWL------------RHEVPMN---MAEEDRISVSFNY 205 (216)
T ss_dssp EEEECCCTTEEEEEETTS------------CEEECCC---CSSSCEEEEEEEE
T ss_pred EEEEECCCCEEEEECCCC------------EEECCCC---CCCCCEEEEEEEE
T ss_conf 488712139899989998------------7514678---9999989999702
No 25
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCSG, PSI-2, midwest center for structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=24.17 E-value=29 Score=13.77 Aligned_cols=57 Identities=12% Similarity=0.064 Sum_probs=29.5
Q ss_pred CCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCH
Q ss_conf 7880113114440799999999998738848997379898999999999999863898
Q T0573 5 AIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPV 62 (311)
Q Consensus 5 ~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~ 62 (311)
.+++.......+|...+.+.|.+|+++.-+...++ |+....=|-......++|..+.
T Consensus 36 G~~v~~~~~v~D~~~~i~~~l~~~~~~~d~vittG-GlGpt~dD~T~~~va~~lg~~l 92 (172)
T 3kbq_A 36 GYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSG-GLGPTFDDMTVEGFAKCIGQDL 92 (172)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEES-CCSSSTTCCHHHHHHHHHTCCC
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEECC-CCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99177999989849999999999873488999817-8867875409999999809975
No 26
>3fgx_A Rbstp2171; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.90A {Bacillus stearothermophilus}
Probab=23.52 E-value=30 Score=13.68 Aligned_cols=41 Identities=5% Similarity=0.038 Sum_probs=31.7
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 013665674432144899999999999999988899986328880
Q T0573 112 AHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER 156 (311)
Q Consensus 112 ~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 156 (311)
.+.-+++.|+.-+.|+..+++|=.-+..++.+|+.++ |+-.
T Consensus 67 ~lvLD~i~pd~~~~L~~d~EEyPGia~s~~saL~~~v----Gls~ 107 (114)
T 3fgx_A 67 NLTFSCIVPEQEEELRQAAEEFPGLTFNTASRLMEIV----GASA 107 (114)
T ss_dssp HHHHTTBCGGGHHHHHHHHHHSTTHHHHHHHHHHHHH----TCCC
T ss_pred HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH----CCCH
T ss_conf 7756405788389999999878518889999999995----7322
No 27
>2k9l_A RNA polymerase sigma factor RPON; protein, transcription; NMR {Aquifex aeolicus}
Probab=21.13 E-value=23 Score=14.53 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHHHCCEEEE------ECCCCCHHHHHHHHHH
Q ss_conf 079999999999873884899------7379898999999999
Q T0573 17 DFTRFAQELGASFERYGFAVL------SDYDLDQARIDAAVDS 53 (311)
Q Consensus 17 d~~~~~~~l~~A~~~~Gff~l------~nHGI~~~li~~~~~~ 53 (311)
....+|..|...+...|++.. ...|++.+.+++++..
T Consensus 29 ~e~~Ia~~lI~~LD~~GyL~~~~~eia~~l~~~~~~ve~vl~~ 71 (76)
T 2k9l_A 29 KEQELALELLNYLNEKGFLSKSVEEISDVLRCSVEELEKVRQK 71 (76)
T ss_dssp TSHHHHHHHHHHCTTSSTTCCCHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 9999999999745988875889999999979099999999999
Done!