Query T0573 NP_419019.1, CAULOBACTER CRESCENTUS, 311 residues Match_columns 311 No_of_seqs 130 out of 2009 Neff 8.1 Searched_HMMs 15564 Date Fri Jun 4 14:33:21 2010 Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0573.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0573.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1gp6a_ b.82.2.1 (A:) Anthocya 100.0 0 0 517.3 26.0 291 2-306 42-342 (349) 2 d1w9ya1 b.82.2.1 (A:2-308) 1-a 100.0 0 0 511.2 23.8 281 5-306 2-290 (307) 3 d1odma_ b.82.2.1 (A:) Isopenic 100.0 0 0 495.8 28.5 298 1-309 2-323 (329) 4 d1dcsa_ b.82.2.1 (A:) Deacetox 100.0 0 0 486.7 19.1 286 1-305 1-302 (311) 5 d1dcsa_ b.82.2.1 (A:) Deacetox 100.0 0 0 468.4 12.0 292 1-306 1-308 (311) 6 d2iuwa1 b.82.2.10 (A:70-279) A 94.6 0.08 5.1E-06 30.5 7.2 81 171-267 108-206 (210) 7 d2fdia1 b.82.2.10 (A:15-214) A 79.1 2.2 0.00014 20.5 8.7 113 114-266 70-195 (200) 8 d2csga1 b.82.2.12 (A:3-419) Hy 70.6 2.2 0.00014 20.5 3.4 54 3-59 56-109 (417) 9 d1pvta_ c.74.1.1 (A:) Putative 53.1 4 0.00025 18.7 2.1 15 44-58 4-18 (232) 10 d1ojra_ c.74.1.1 (A:) L-rhamnu 50.1 3.8 0.00024 18.8 1.6 11 47-57 10-20 (274) 11 d1e4cp_ c.74.1.1 (P:) L-fuculo 36.1 9.3 0.0006 16.1 1.9 11 47-57 7-17 (206) 12 d2nrka1 d.218.1.14 (A:4-170) H 29.9 5.2 0.00033 17.9 -0.3 37 5-42 44-80 (167) 13 d1r3sa_ c.1.22.1 (A:) Uroporph 23.8 20 0.0013 13.7 5.3 10 26-35 60-69 (356) 14 d1vm6a3 c.2.1.3 (A:1-96,A:183- 23.1 21 0.0014 13.6 2.6 13 26-38 58-70 (128) 15 d1l6ja1 a.20.1.2 (A:29-105) Ge 21.5 23 0.0014 13.4 3.1 38 25-62 17-54 (77) 16 d1vr3a1 b.82.1.6 (A:1-179) Aci 21.2 23 0.0015 13.4 3.8 40 189-230 89-128 (179) No 1 >d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=100.00 E-value=0 Score=517.31 Aligned_cols=291 Identities=22% Similarity=0.350 Sum_probs=246.6 Q ss_pred CCCCCCEEEHHHCCCC----HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC--CCC Q ss_conf 7667880113114440----7999999999987388489973798989999999999998638987999997067--886 Q T0573 2 STSAIDPVSFSLYAKD----FTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GGA 75 (311) Q Consensus 2 s~~~iP~IDls~~~~d----~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~--~~~ 75 (311) +..+||||||+.+.++ +++++++|.+||+++|||||+||||+.+++++++++++.||+||.|+|++|.... +.+ T Consensus 42 ~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~ 121 (349) T d1gp6a_ 42 DGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI 121 (349) T ss_dssp CSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBC T ss_pred CCCCCCEEECHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC T ss_conf 88986728872027989899999999999999838889997249799999999999999981999887553101355875 Q ss_pred CCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 41345553003566652000001104555666322001366567443214489999999999999998889998632888 Q T0573 76 RGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE 155 (311) Q Consensus 76 rGy~~~~~e~~~~~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 155 (311) +||.....+.. ....++.+.+... . .......+|+||+..+.|++.+++|+++|..++.+|+++++++||++ T Consensus 122 ~~~g~~~~~~~--~~~~~~~~~~~~~-~-----~~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~ 193 (349) T d1gp6a_ 122 QGYGSKLANNA--SGQLEWEDYFFHL-A-----YPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLE 193 (349) T ss_dssp SEEECCCCCST--TCCCCSCEEEEEE-E-----ESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC T ss_pred CCCCCCCCCCC--CCCCCHHHHHCCC-C-----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 54466455565--6542022210011-2-----22222463222235503789999999999999875167789870997 Q ss_pred HHHHHHHHC---CCCHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCCEEEECHH Q ss_conf 013578652---77301032203565763101775688886438998415778621352388458863179717987113 Q T0573 156 RDFFKPTVQ---DGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGD 232 (311) Q Consensus 156 ~~~f~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTll~qd~~~GLqv~~~~g~W~~V~p~~~~liVniGd 232 (311) +++|.+.+. ...+.||++|||+++.+...+|+++|||+|+||||+|++++||||+ .+|+|++|+|.+|++|||+|| T Consensus 194 ~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~-~~g~W~~V~p~~~a~vVNvGD 272 (349) T d1gp6a_ 194 PDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGD 272 (349) T ss_dssp TTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECH T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCEEEE-CCCCEEECCCCCCCEEEEHHH T ss_conf 7777777514555200256403566531110125566778761588720677634662-289668734798985663876 Q ss_pred HHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEE-ECCHHHCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 45330488650572056327544357751488874268999767-150654288777667885018999999999 Q T0573 233 MLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEI-KTLQNCVTAENPDRYPESITADEFLQQRLR 306 (311) Q Consensus 233 ~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p~~d~~i-~p~~~~~~~~~~~~~~~~~t~~e~~~~r~~ 306 (311) +||+||||+||||+|||+.|+. .+|||++||++|+.|++| .|+++|+++++|++| +++|++||+++|+. T Consensus 273 ~l~~~TnG~~~St~HRVv~~~~----~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y-~~~t~~e~~~~rl~ 342 (349) T d1gp6a_ 273 TLEILSNGKYKSILHRGLVNKE----KVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKF-PPRTFAQHIEHKLF 342 (349) T ss_dssp HHHHHTTTSSCCCCEEECCCSS----CCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSS-CCEEHHHHHHHHHH T ss_pred HHHHHHCCCCCCCCCCCCCCCC----CCEEEEEEEECCCCCCEEECCCHHHCCCCCCCCC-CCCCHHHHHHHHHH T ss_conf 8889849970376765417999----9869999884489864252388787299887778-97029999999971 No 2 >d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Probab=100.00 E-value=0 Score=511.18 Aligned_cols=281 Identities=21% Similarity=0.299 Sum_probs=247.9 Q ss_pred CCCEEEHHHCC-CCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 78801131144-40799999999998738848997379898999999999999863898799999706788641345553 Q T0573 5 AIDPVSFSLYA-KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGV 83 (311) Q Consensus 5 ~iP~IDls~~~-~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~~~~rGy~~~~~ 83 (311) +||+|||+.++ .|+++++++|.+||+++|||||+||||+.+++++++++++.||++|.|+|+++......++||.+.. T Consensus 2 ~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~~~~- 80 (307) T d1w9ya1 2 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV- 80 (307) T ss_dssp CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG- T ss_pred CCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC- T ss_conf 9894887026995799999999999874938999847979999999999999987071777655403788876754424- Q ss_pred EECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH Q ss_conf 00356665200000110455566632200136656744321448999999999999999888999863288801357865 Q T0573 84 ETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTV 163 (311) Q Consensus 84 e~~~~~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 163 (311) ...|++|.|.+... .....+.||+.+++|++.+++|++.|.+++.+|+++++++||+++++|.+.+ T Consensus 81 ------~~~d~~e~~~~~~~--------~~~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~ 146 (307) T d1w9ya1 81 ------TDMDWESTFFLKHL--------PISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAF 146 (307) T ss_dssp ------GGCCCCEEEEEEEE--------SCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHH T ss_pred ------CCCCHHHHCCCCCC--------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH T ss_conf ------45670430222332--------2457666876655778999999998878777799999987098667777654 Q ss_pred C---CCCHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCC-CCCCEEEECCCCEEEEEECCCCEEEECHHHHHHCCC Q ss_conf 2---773010322035657631017756888864389984157-786213523884588631797179871134533048 Q T0573 164 Q---DGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAE-EGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTN 239 (311) Q Consensus 164 ~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTll~qd~-~~GLqv~~~~g~W~~V~p~~~~liVniGd~l~~~Tn 239 (311) . ...+.+|++||||++.++...|+++|||+|+||||+|++ ++||||+ ++|+|++|+|.||++|||+||+||+||| T Consensus 147 ~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~-~~g~Wi~v~p~~~~~vVnvGD~l~~~Tn 225 (307) T d1w9ya1 147 YGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITN 225 (307) T ss_dssp HTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHTT T ss_pred HCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE-CCCCEEEECCCCCEEEEECCHHHHHHHC T ss_conf 001355500001378999531100002466666445886206887837993-3993798216898489980366677628 Q ss_pred CEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCHHHCC---CCCCCCCCCCCCHHHHHHHHHH Q ss_conf 865057205632754435775148887426899976715065428---8777667885018999999999 Q T0573 240 NVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVT---AENPDRYPESITADEFLQQRLR 306 (311) Q Consensus 240 G~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~---~~~~~~~~~~~t~~e~~~~r~~ 306 (311) |+||||+|||+.++ +.+||||+||++|+.|++|.|+++|++ +++|++| +++|++||++.|++ T Consensus 226 g~~kSt~HRVv~~~----~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y-~~~t~~ey~~~~~~ 290 (307) T d1w9ya1 226 GKYKSVMHRVIAQK----DGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVY-PKFVFDDYMKLYAG 290 (307) T ss_dssp TSSCCCCEEECCCS----SSCCEEEEEEEECCTTCEECCCGGGC--------CCC-CCEEHHHHHHTTTT T ss_pred CCCCCCCCEEECCC----CCCCEEEEEEEECCCCCEEECCHHHHCCCCCCCCCCC-CCEEHHHHHHHHHH T ss_conf 84557675350379----9972788998617999889678788335476677779-97419999999985 No 3 >d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Probab=100.00 E-value=0 Score=495.78 Aligned_cols=298 Identities=22% Similarity=0.316 Sum_probs=245.2 Q ss_pred CCCCCCCEEEHHHCCC----CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC--CC Q ss_conf 9766788011311444----07999999999987388489973798989999999999998638987999997067--88 Q T0573 1 MSTSAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GG 74 (311) Q Consensus 1 ms~~~iP~IDls~~~~----d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~--~~ 74 (311) ||.++||+|||+.+.+ ++.+++++|.+||+++|||||+||||+.+++.++.+. .||.+|.|+|.++.... .. T Consensus 2 ~s~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~~i~~~~~~--ff~~l~~eek~~~~~~~~~~~ 79 (329) T d1odma_ 2 VSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGINVQRLSQKTKE--FHMSITPEEKWDLAIRAYNKE 79 (329) T ss_dssp CCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCCCHHHHHHHHHH--HHHHCCHHHHHHHBCTTTCTT T ss_pred CCCCCCCCEECHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHH--HCCCCCHHHHHHHCCCCCCCC T ss_conf 987898808865516989899999999999998768589999489899999999998--634389888876323443456 Q ss_pred CCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCC----CHHHCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 64134555300356665200000110455566632----2001366567443--21448999999999999999888999 Q T0573 75 ARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHR----FRAHMADNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAI 148 (311) Q Consensus 75 ~rGy~~~~~e~~~~~~~~D~~E~~~~~~~~~~~~~----~~~~~~~n~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~l 148 (311) .+||.+.+.... ..+..+.++++....+...... ......+|+||++ +|+||+.+++|+++|.+|+.+||+++ T Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~la~~ll~~l 158 (329) T d1odma_ 80 HQDQVRAGYYLS-IPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGY 158 (329) T ss_dssp CTTCSSSEEECC-BTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHH T ss_conf 787555453015-7886553111002333342100012357765666686424462399999999987400010005666 Q ss_pred HHHCCCCHHHHHHHHCC--CCHHHHHHHCCC---CCCC-------HHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCE Q ss_conf 86328880135786527--730103220356---5763-------10177568888643899841577862135238845 Q T0573 149 ATYLKLERDFFKPTVQD--GNSVLRLLHYPP---IPKD-------ATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQW 216 (311) Q Consensus 149 a~~Lgl~~~~f~~~~~~--~~~~lr~~~Yp~---~~~~-------~~~~~~~~HtD~g~lTll~qd~~~GLqv~~~~g~W 216 (311) +++||+++++|.+++.. +.+.+|++|||+ ++++ ..++|+++|||+|+||||+||+++||||++.+| | T Consensus 159 a~~Lgl~~~~f~~~~~~~~~~~~~~~l~y~~~~~~~~~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~~-W 237 (329) T d1odma_ 159 ALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAG-Y 237 (329) T ss_dssp HHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETTE-E T ss_pred HHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCC-C T ss_conf 764185378899876322300023201355679997011033334666433367776533202114510121233678-4 Q ss_pred EEEEECCCCEEEECHHHHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCHHHCCCCCCCCCCCCCC Q ss_conf 88631797179871134533048865057205632754435775148887426899976715065428877766788501 Q T0573 217 LPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESIT 296 (311) Q Consensus 217 ~~V~p~~~~liVniGd~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~~~~~~~~~t 296 (311) ++|+|.||++|||+||+||+||||+||||+|||+.++ .+|||++||++|+.|++|.|++++.. ..+..| +++| T Consensus 238 ~~v~~~~~~~vVN~Gd~l~~~Tng~~kst~HRV~~~~-----~~R~Si~~F~~P~~d~~i~pl~~~~~-~~~~~~-~~~~ 310 (329) T d1odma_ 238 QDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVN-----AERQSLPFFVNLGYDSVIDPFDPREP-NGKSDR-EPLS 310 (329) T ss_dssp EECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCC-----SCEEEEEEEECCCTTCBCCCCCTTST-TCCCSS-CCCB T ss_pred EEECCCCCEEEEEHHHHHHHHHCCEECCCCCEECCCC-----CCEEEEEEEECCCCCCEEECCCCCCC-CCCCCC-CCCC T ss_conf 2554666537886324678872998148776126999-----89788999877899988957764687-776667-9923 Q ss_pred HHHHHHHHHHHHC Q ss_conf 8999999999853 Q T0573 297 ADEFLQQRLREIK 309 (311) Q Consensus 297 ~~e~~~~r~~~~~ 309 (311) ++||+++|+.++. T Consensus 311 ~~e~l~~~l~~~~ 323 (329) T d1odma_ 311 YGDYLQNGLVSLI 323 (329) T ss_dssp HHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHH T ss_conf 9999999999999 No 4 >d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Probab=100.00 E-value=0 Score=486.66 Aligned_cols=286 Identities=20% Similarity=0.304 Sum_probs=238.8 Q ss_pred CCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC--CCCCCCC Q ss_conf 97667880113114440799999999998738848997379898999999999999863898799999706--7886413 Q T0573 1 MSTSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV--KGGARGY 78 (311) Q Consensus 1 ms~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~--~~~~rGy 78 (311) |++ +||||||+.+.+.. .+++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++... ...+||| T Consensus 1 m~~-siPvIDl~~l~~~~--~~e~l~~A~~~~GFf~l~nHGi~~~~i~~~~~~~~~fF~lp~e~kk~~~~~~~~~~~rGy 77 (311) T d1dcsa_ 1 MDT-TVPTFSLAELQQGL--HQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGF 77 (311) T ss_dssp CCC-CCCEEEHHHHHTTC--SHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEE T ss_pred CCC-CCCEEECHHHCCCC--HHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCHHEECCCCCCCCCC T ss_conf 998-87878854416966--899999998778399999189899999999999999973967762211005555765530 Q ss_pred CCCCCEECCC----CCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 4555300356----665200000110455566632200136656744321448999999999999999888999863288 Q T0573 79 IPFGVETAKG----ADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKL 154 (311) Q Consensus 79 ~~~~~e~~~~----~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 154 (311) ++.+.|.... ....|++|+|.++ ..+|+||. ++|++.+.+|++.|.+++.+|+++++++||+ T Consensus 78 ~~~~~e~~~~~~~~~~~~d~~~~~~~~------------~~~n~wP~--~~f~~~~~~~~~~~~~l~~~ll~~la~~lgl 143 (311) T d1dcsa_ 78 TGLESESTAQITNTGSYSDYSMCYSMG------------TADNLFPS--GDFERIWTQYFDRQYTASRAVAREVLRATGT 143 (311) T ss_dssp EEC-----------------CEEEEEC------------SSSCCCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC T ss_pred CCCCCEECCCCCCCCCCCCCCHHHCCC------------CCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 566530013456855444321000145------------56765666--0379999999999999999999998764267 Q ss_pred CHHHHHHHHCCCCHHHHHHHCCCCCC----CHHCCCCCCCCCCCEEEEEECCCCC-C---CEEEECCCCEEEEEECCCCE Q ss_conf 80135786527730103220356576----3101775688886438998415778-6---21352388458863179717 Q T0573 155 ERDFFKPTVQDGNSVLRLLHYPPIPK----DATGVRAGAHGDINTITLLLGAEEG-G---LEVLDRDGQWLPINPPPGCL 226 (311) Q Consensus 155 ~~~~f~~~~~~~~~~lr~~~Yp~~~~----~~~~~~~~~HtD~g~lTll~qd~~~-G---Lqv~~~~g~W~~V~p~~~~l 226 (311) ++++|.+.+.++.+.+|++|||||++ ++..+|+++|||+|+||||+||.++ | ||+. .+|+|++|+|.||++ T Consensus 144 ~~~~~~~~~~~~~~~lRl~~YP~~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~g~~~lq~~-~~g~W~~V~p~pg~l 222 (311) T d1dcsa_ 144 EPDGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAE-VGGAFTDLPYRPDAV 222 (311) T ss_dssp CCTTCHHHHHSCCCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEE-ETTEEEECCCCTTCE T ss_pred CCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEEEC-CCCCEEEEECCCCEE T ss_conf 6114567641540021102467744445577530111366677503688304788860488751-676237874478879 Q ss_pred EEECHHHHHHCCCCEEECCCCEEECCCCCC-CCCCCEEEEEECCCCCCCEEEC-CHHHCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 987113453304886505720563275443-5775148887426899976715-06542887776678850189999999 Q T0573 227 VINIGDMLERLTNNVLPSTVHRVVNPPPER-RGVPRYSTPFFLHFASDYEIKT-LQNCVTAENPDRYPESITADEFLQQR 304 (311) Q Consensus 227 iVniGd~l~~~TnG~~ks~~HRV~~p~~~~-~~~~R~S~~~F~~p~~d~~i~p-~~~~~~~~~~~~~~~~~t~~e~~~~r 304 (311) |||+||+||+||||+|||++|||+.|+..+ .+.+|||++||++|+.|++|.| +......+....+ +..|+++|+.+. T Consensus 223 vVNvGD~l~~~TnG~~~S~~HRVv~p~~~~~~~~~R~Si~~F~~P~~d~~i~pP~~~~~~~~~~~~~-~~~~~~~~~~~~ 301 (311) T d1dcsa_ 223 LVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFSVPLARECGFDVSLDG-ETATFQDWIGGN 301 (311) T ss_dssp EEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEEHHHHHHTTCCCCCCS-SEEEHHHHHCSS T ss_pred EEECCHHHHHHHCCEECCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCC-CCCCHHHHHHHH T ss_conf 9987879987719980487866768865668998779999997179997878876100366777789-998788888899 Q ss_pred H Q ss_conf 9 Q T0573 305 L 305 (311) Q Consensus 305 ~ 305 (311) + T Consensus 302 y 302 (311) T d1dcsa_ 302 Y 302 (311) T ss_dssp C T ss_pred H T ss_conf 9 No 5 >d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} SCOP: d1unba_ d1rxga_ d1uoga_ d1hjfa_ d1e5ha_ d1rxfa_ d1hjga_ d1e5ia_ d1w2ax_ d1w28a_ Probab=100.00 E-value=0 Score=468.36 Aligned_cols=292 Identities=17% Similarity=0.231 Sum_probs=236.5 Q ss_pred CCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC--CCCCCC Q ss_conf 976678801131144407999999999987388489973798989999999999998638987999997067--886413 Q T0573 1 MSTSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GGARGY 78 (311) Q Consensus 1 ms~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~--~~~rGy 78 (311) ||+ +||+|||+.+.+.. .+++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++.... ..++|| T Consensus 1 m~~-~IP~IDls~l~~~~--~~~~l~~A~~~~GFf~l~nHGI~~eli~~~~~~~~~fF~lp~e~k~k~~~~~~~~~~~g~ 77 (311) T d1dcsa_ 1 MDT-TVPTFSLAELQQGL--HQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGF 77 (311) T ss_dssp CCC-CCCEEEHHHHHTTC--SHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEE T ss_pred CCC-CCCEEEHHHCCCCC--HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC T ss_conf 988-66644311045852--789999998628758998489898999999999999862886686765227788752114 Q ss_pred CCCCCEECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH Q ss_conf 45553003566652000001104555666322001366567443214489999999999999998889998632888013 Q T0573 79 IPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDF 158 (311) Q Consensus 79 ~~~~~e~~~~~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 158 (311) .+.+.+.... ..+.++.+.+.... ....+.||...++|++.+++|++.|.+++..|+++++++||+++++ T Consensus 78 ~~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~y~~~~~~l~~~ll~~i~~~Lg~~~~~ 147 (311) T d1dcsa_ 78 TGLESESTAQ--ITNTGSYSDYSMCY--------SMGTADNLFPSGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDG 147 (311) T ss_dssp EEC-------------------CEEE--------EECSSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTT T ss_pred CCCCCCCCCC--CCCCCCCCCCCCCC--------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH T ss_conf 5544323344--35643111024301--------2566533466500479999999999999999999989750775035 Q ss_pred HHHHHCCCCHHHHHHHCCCCCC----CHHCCCCCCCCCCCEEEEEECCCCCCCEEE---ECCCCEEEEEECCCCEEEECH Q ss_conf 5786527730103220356576----310177568888643899841577862135---238845886317971798711 Q T0573 159 FKPTVQDGNSVLRLLHYPPIPK----DATGVRAGAHGDINTITLLLGAEEGGLEVL---DRDGQWLPINPPPGCLVINIG 231 (311) Q Consensus 159 f~~~~~~~~~~lr~~~Yp~~~~----~~~~~~~~~HtD~g~lTll~qd~~~GLqv~---~~~g~W~~V~p~~~~liVniG 231 (311) +.+.+.++.+.+|++||||++. ++..+|+++|||+|+||||+||+++||++. ..+|+|++|+|.||++|||+| T Consensus 148 ~~~~~~~~~~~~r~~~Ypp~~~~~~~~~~~~g~~~HtD~g~lTlL~q~~~~gg~~~l~~~~~g~W~~v~p~~~~~iVN~G 227 (311) T d1dcsa_ 148 GVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCG 227 (311) T ss_dssp CHHHHHSCCCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEEC T ss_pred HHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCEEEEECCCCCEEEEHH T ss_conf 67776213310110000047731134435440001378608999961478897304411568835775217982698677 Q ss_pred HHHHHCCCCEEECCCCEEECCCCCC-CCCCCEEEEEECCCCCCCEEEC-CHHHCCC-----CCCCCCCCCCCHHHHHHHH Q ss_conf 3453304886505720563275443-5775148887426899976715-0654288-----7776678850189999999 Q T0573 232 DMLERLTNNVLPSTVHRVVNPPPER-RGVPRYSTPFFLHFASDYEIKT-LQNCVTA-----ENPDRYPESITADEFLQQR 304 (311) Q Consensus 232 d~l~~~TnG~~ks~~HRV~~p~~~~-~~~~R~S~~~F~~p~~d~~i~p-~~~~~~~-----~~~~~~~~~~t~~e~~~~r 304 (311) |+||+||||+|||++|||+.|+..+ ...+|||++||++|+.|++|.| ++..+.. +.+++| +++|++||++.| T Consensus 228 d~L~~~T~g~~~s~~HRVv~p~~~~~~~~~R~S~~~F~~P~~d~~i~pp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r 306 (311) T d1dcsa_ 228 AIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFSVPLARECGFDVSLDGETATF-QDWIGGNYVNIR 306 (311) T ss_dssp HHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEEHHHHHHTTCCCCCCSSEEEH-HHHHCSSCCCEE T ss_pred HHHHHHCCCEEECCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCCCHHHCCCCCCCCCCCCC-CCCCHHHHHHHH T ss_conf 9999870890503502686478676456652268887538998178367511105554578888636-530078899999 Q ss_pred HH Q ss_conf 99 Q T0573 305 LR 306 (311) Q Consensus 305 ~~ 306 (311) ++ T Consensus 307 ~~ 308 (311) T d1dcsa_ 307 RT 308 (311) T ss_dssp CC T ss_pred HH T ss_conf 75 No 6 >d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Probab=94.65 E-value=0.08 Score=30.49 Aligned_cols=81 Identities=23% Similarity=0.217 Sum_probs=51.2 Q ss_pred HHHHCCCCCCCHHCCCCCCCCCCC--------EEEEEECCCCCCCEEEE----------CCCCEEEEEECCCCEEEECHH Q ss_conf 322035657631017756888864--------38998415778621352----------388458863179717987113 Q T0573 171 RLLHYPPIPKDATGVRAGAHGDIN--------TITLLLGAEEGGLEVLD----------RDGQWLPINPPPGCLVINIGD 232 (311) Q Consensus 171 r~~~Yp~~~~~~~~~~~~~HtD~g--------~lTll~qd~~~GLqv~~----------~~g~W~~V~p~~~~liVniGd 232 (311) .+++|+. .+-++++|.|-- .++|-+-.. .-+.++. .+.+++.|+-.+|+++|.-|+ T Consensus 108 ~ln~Y~~-----~~~~I~~H~D~~~~~~~~~~I~slSlG~~-~~~~~r~~~~~~~~~~~~~~~~~~i~L~~gsl~vm~g~ 181 (210) T d2iuwa1 108 LCNLYRN-----EKDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGA 181 (210) T ss_dssp EEEEECS-----TTCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEEET T ss_pred HHHCCCC-----CCCCCCCCCCCCHHCCCCCCEEEEEECCC-EEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCH T ss_conf 3210026-----89762267288443056874368861781-68877221122468866777328997699998995823 Q ss_pred HHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEE Q ss_conf 45330488650572056327544357751488874 Q T0573 233 MLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFF 267 (311) Q Consensus 233 ~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F 267 (311) +=..|+ |.| |+.......|+|+.|= T Consensus 182 ~~~~~~--------H~I--p~~~~~~~~RiSlTfR 206 (210) T d2iuwa1 182 TQADWQ--------HRV--PKEYHSREPRVNLTFR 206 (210) T ss_dssp HHHHEE--------EEE--CCCSSCCCCEEEEEEE T ss_pred HHCCEE--------CCC--CCCCCCCCCEEEEEEE T ss_conf 437207--------347--7668999982899987 No 7 >d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Probab=79.10 E-value=2.2 Score=20.46 Aligned_cols=113 Identities=18% Similarity=0.226 Sum_probs=57.5 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHCCCCCCCC-- Q ss_conf 366567443214489999999999999998889998632888013578652773010322035657631017756888-- Q T0573 114 MADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHG-- 191 (311) Q Consensus 114 ~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~Ht-- 191 (311) .....||..++.+.+.++.+. ...+.+. ...++.+ +|+|++- -++++|- T Consensus 70 ~~~~~wp~iP~~l~~L~~~~~---------------~~~~~~~-------~~pn~~L-vN~Y~~G------~~~~~h~dd 120 (200) T d2fdia1 70 QTNKPWPAMPQSFHNLCQRAA---------------TAAGYPD-------FQPDACL-INRYAPG------AKLSLHQDK 120 (200) T ss_dssp TTSSBCCCCCHHHHHHHHHHH---------------HHHTCTT-------CCCSEEE-EEEECTT------CCEEEECCC T ss_pred CCCCCCCCCCHHHHHHHHHHH---------------HHCCCCC-------CCCCEEE-EEEECCC------CCCCCCCCC T ss_conf 889989986478999999999---------------8747875-------4877668-9774699------976656138 Q ss_pred ---CCC--EEEEEECCCCCC-CEEE--ECCCCEEEEEECCCCEEEECHHHHHHCCCCEEECCCCEEECCC---CCCCCCC Q ss_conf ---864--389984157786-2135--2388458863179717987113453304886505720563275---4435775 Q T0573 192 ---DIN--TITLLLGAEEGG-LEVL--DRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPP---PERRGVP 260 (311) Q Consensus 192 ---D~g--~lTll~qd~~~G-Lqv~--~~~g~W~~V~p~~~~liVniGd~l~~~TnG~~ks~~HRV~~p~---~~~~~~~ 260 (311) |++ .++|-+.+ +. .++. .+.+.+..+.-.+|+++|.-|++ +.|. |.|-.-. ....... T Consensus 121 dE~~~~~pIvslSLG~--~~~f~f~~~~~~~~~~~~~L~~Gdllvm~G~~-r~~~--------H~V~~~~~~~~~~~~~~ 189 (200) T d2fdia1 121 DEPDLRAPIVSVSLGL--PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLFY--------HGIQPLKAGFHPLTIDC 189 (200) T ss_dssp CSSCTTSCEEEEEEES--CEEEEECCSSTTSCCEEEEECTTCEEEECGGG-GGCC--------EEECCCCCCCBTTTBTC T ss_pred CCCCCCCCCEEEEEEC--CEEEEECCCCCCCCEEEEECCCCCEEEECCCH-HHEE--------ECCCCCCCCCCCCCCCC T ss_conf 7432579845999847--73688436646871289975898889968536-6148--------43773047878888997 Q ss_pred CEEEEE Q ss_conf 148887 Q T0573 261 RYSTPF 266 (311) Q Consensus 261 R~S~~~ 266 (311) |+|+.| T Consensus 190 RislTf 195 (200) T d2fdia1 190 RYNLTF 195 (200) T ss_dssp EEEEEE T ss_pred EEEEEE T ss_conf 489998 No 8 >d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]} Probab=70.65 E-value=2.2 Score=20.49 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=41.6 Q ss_pred CCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHC Q ss_conf 667880113114440799999999998738848997379898999999999999863 Q T0573 3 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFA 59 (311) Q Consensus 3 ~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~ 59 (311) .+-||.|||+.+.+.. +-+++.+..++.||..|.| -||.+.+.+..+...+|.+ T Consensus 56 ~~iIPeI~F~dI~~~~--~~~~~~~~IkrrG~vVIRn-V~p~e~a~~w~~~l~~Yle 109 (417) T d2csga1 56 QPVWPIIPFSELAMGN--ISDATRAEVKRRGCAVIKG-HFPREQALAWDQSMLDYLD 109 (417) T ss_dssp CCSSCBCCHHHHHTTC--CCHHHHHHHHHHSEEEETT-SSCHHHHHHHHHHHHHHHH T ss_pred CCCCEEEEHHHHHCCC--CCHHHHHHHHHCCEEEECC-CCCHHHHHHHHHHHHHHHH T ss_conf 9985065589952678--9989999998618899888-7899999999999999998 No 9 >d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]} Probab=53.06 E-value=4 Score=18.68 Aligned_cols=15 Identities=13% Similarity=-0.028 Sum_probs=7.7 Q ss_pred HHHHHHHHHHHHHHH Q ss_conf 899999999999986 Q T0573 44 QARIDAAVDSAKAFF 58 (311) Q Consensus 44 ~~li~~~~~~~~~fF 58 (311) .++++++...++.++ T Consensus 4 ~e~~~el~~~~~~l~ 18 (232) T d1pvta_ 4 RETIREIQKVAYWLA 18 (232) T ss_dssp HHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHH T ss_conf 999999999999999 No 10 >d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Probab=50.10 E-value=3.8 Score=18.82 Aligned_cols=11 Identities=0% Similarity=0.202 Sum_probs=3.8 Q ss_pred HHHHHHHHHHH Q ss_conf 99999999998 Q T0573 47 IDAAVDSAKAF 57 (311) Q Consensus 47 i~~~~~~~~~f 57 (311) ++++..+++.+ T Consensus 10 ~~~~~~~~~~~ 20 (274) T d1ojra_ 10 VQGMIKATTDA 20 (274) T ss_dssp HHHHHHHHHHH T ss_pred HHHHHHHHHHH T ss_conf 99999999999 No 11 >d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Probab=36.09 E-value=9.3 Score=16.08 Aligned_cols=11 Identities=9% Similarity=0.220 Sum_probs=3.9 Q ss_pred HHHHHHHHHHH Q ss_conf 99999999998 Q T0573 47 IDAAVDSAKAF 57 (311) Q Consensus 47 i~~~~~~~~~f 57 (311) .+++...++.+ T Consensus 7 ~~~l~~~~r~l 17 (206) T d1e4cp_ 7 ARQIIDTCLEM 17 (206) T ss_dssp HHHHHHHHHHH T ss_pred HHHHHHHHHHH T ss_conf 99999999999 No 12 >d2nrka1 d.218.1.14 (A:4-170) Hypothetical protein GrpB {Enterococcus faecalis [TaxId: 1351]} Probab=29.93 E-value=5.2 Score=17.86 Aligned_cols=37 Identities=22% Similarity=0.472 Sum_probs=18.6 Q ss_pred CCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCC Q ss_conf 78801131144407999999999987388489973798 Q T0573 5 AIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDL 42 (311) Q Consensus 5 ~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI 42 (311) .-|+||+...-++-..+ ..+.++++..||.+.-++|+ T Consensus 44 AKpiIDI~v~V~~~~~~-~~~~~~L~~lGy~~~~~~~~ 80 (167) T d2nrka1 44 AKPIIDFLVIVEEIEKV-DLLQWEFERIGYEYMGEFGL 80 (167) T ss_dssp BCSCEEEEEEESCSGGG-GGGHHHHHHTTCEECTTTTS T ss_pred CCCEEEEEEEECCHHHH-HHHHHHHHHCCCEECCCCCC T ss_conf 68724789861683669-99999998659787376788 No 13 >d1r3sa_ c.1.22.1 (A:) Uroporphyrinogen decarboxylase, UROD {Human (Homo sapiens) [TaxId: 9606]} Probab=23.78 E-value=20 Score=13.72 Aligned_cols=10 Identities=10% Similarity=0.272 Sum_probs=4.1 Q ss_pred HHHHHHCCEE Q ss_conf 9998738848 Q T0573 26 GASFERYGFA 35 (311) Q Consensus 26 ~~A~~~~Gff 35 (311) ....+++|+= T Consensus 60 l~p~~~~~~D 69 (356) T d1r3sa_ 60 LQPLRRFPLD 69 (356) T ss_dssp HHHHHHSCCS T ss_pred HHHHHHCCCC T ss_conf 4489867954 No 14 >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Probab=23.05 E-value=21 Score=13.62 Aligned_cols=13 Identities=8% Similarity=0.102 Sum_probs=4.2 Q ss_pred HHHHHHCCEEEEE Q ss_conf 9998738848997 Q T0573 26 GASFERYGFAVLS 38 (311) Q Consensus 26 ~~A~~~~Gff~l~ 38 (311) .+.|.+.|.=.|+ T Consensus 58 l~~~~~~~~p~Vi 70 (128) T d1vm6a3 58 VDLCKKYRAGLVL 70 (128) T ss_dssp HHHHHHHTCEEEE T ss_pred HHHHHHCCCCEEE T ss_conf 9998745997799 No 15 >d1l6ja1 a.20.1.2 (A:29-105) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]} Probab=21.50 E-value=23 Score=13.42 Aligned_cols=38 Identities=16% Similarity=0.287 Sum_probs=26.2 Q ss_pred HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCH Q ss_conf 99998738848997379898999999999999863898 Q T0573 25 LGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPV 62 (311) Q Consensus 25 l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~ 62 (311) ..+-++++|+.--.+.+-....+.++....++||.||. T Consensus 17 a~~yL~~fGYl~~~~~~~~~~~~~~AIk~fQ~f~gL~v 54 (77) T d1l6ja1 17 AEEYLYRYGYTRVAEMRGESKSLGPALLLLQKQLSLPE 54 (77) T ss_dssp HHHHHHHTTCC-----------CHHHHHHHHHHHTCCC T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC T ss_conf 99999983899877766451999999999999839998 No 16 >d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus musculus) [TaxId: 10090]} Probab=21.23 E-value=23 Score=13.38 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=25.7 Q ss_pred CCCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCCEEEEC Q ss_conf 888864389984157786213523884588631797179871 Q T0573 189 AHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINI 230 (311) Q Consensus 189 ~HtD~g~lTll~qd~~~GLqv~~~~g~W~~V~p~~~~liVni 230 (311) -|+|--..=+| ++.+=.+|...++.|+.|...+|-+|+.- T Consensus 89 ~H~~~Evr~vl--~G~G~f~v~~~~~~~iri~~~~GDli~iP 128 (179) T d1vr3a1 89 LHLDEEIRYIL--EGSGYFDVRDKEDKWIRISMEKGDMITLP 128 (179) T ss_dssp ECSSCEEEEEE--EEEEEEEEECTTSCEEEEEEETTEEEEEC T ss_pred ECCCCEEEEEE--ECCEEEEEECCCCCEEEEEEECCCEEEEC T ss_conf 37884799999--57599999889982999998379889969 Done!