Query         T0573 NP_419019.1, CAULOBACTER CRESCENTUS, 311 residues
Match_columns 311
No_of_seqs    130 out of 2009
Neff          8.1 
Searched_HMMs 15564
Date          Fri Jun  4 14:33:21 2010
Command       /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0573.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0573.hhr 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1gp6a_ b.82.2.1 (A:) Anthocya 100.0       0       0  517.3  26.0  291    2-306    42-342 (349)
  2 d1w9ya1 b.82.2.1 (A:2-308) 1-a 100.0       0       0  511.2  23.8  281    5-306     2-290 (307)
  3 d1odma_ b.82.2.1 (A:) Isopenic 100.0       0       0  495.8  28.5  298    1-309     2-323 (329)
  4 d1dcsa_ b.82.2.1 (A:) Deacetox 100.0       0       0  486.7  19.1  286    1-305     1-302 (311)
  5 d1dcsa_ b.82.2.1 (A:) Deacetox 100.0       0       0  468.4  12.0  292    1-306     1-308 (311)
  6 d2iuwa1 b.82.2.10 (A:70-279) A  94.6    0.08 5.1E-06   30.5   7.2   81  171-267   108-206 (210)
  7 d2fdia1 b.82.2.10 (A:15-214) A  79.1     2.2 0.00014   20.5   8.7  113  114-266    70-195 (200)
  8 d2csga1 b.82.2.12 (A:3-419) Hy  70.6     2.2 0.00014   20.5   3.4   54    3-59     56-109 (417)
  9 d1pvta_ c.74.1.1 (A:) Putative  53.1       4 0.00025   18.7   2.1   15   44-58      4-18  (232)
 10 d1ojra_ c.74.1.1 (A:) L-rhamnu  50.1     3.8 0.00024   18.8   1.6   11   47-57     10-20  (274)
 11 d1e4cp_ c.74.1.1 (P:) L-fuculo  36.1     9.3  0.0006   16.1   1.9   11   47-57      7-17  (206)
 12 d2nrka1 d.218.1.14 (A:4-170) H  29.9     5.2 0.00033   17.9  -0.3   37    5-42     44-80  (167)
 13 d1r3sa_ c.1.22.1 (A:) Uroporph  23.8      20  0.0013   13.7   5.3   10   26-35     60-69  (356)
 14 d1vm6a3 c.2.1.3 (A:1-96,A:183-  23.1      21  0.0014   13.6   2.6   13   26-38     58-70  (128)
 15 d1l6ja1 a.20.1.2 (A:29-105) Ge  21.5      23  0.0014   13.4   3.1   38   25-62     17-54  (77)
 16 d1vr3a1 b.82.1.6 (A:1-179) Aci  21.2      23  0.0015   13.4   3.8   40  189-230    89-128 (179)

No 1  
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=100.00  E-value=0  Score=517.31  Aligned_cols=291  Identities=22%  Similarity=0.350  Sum_probs=246.6

Q ss_pred             CCCCCCEEEHHHCCCC----HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC--CCC
Q ss_conf             7667880113114440----7999999999987388489973798989999999999998638987999997067--886
Q T0573             2 STSAIDPVSFSLYAKD----FTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GGA   75 (311)
Q Consensus         2 s~~~iP~IDls~~~~d----~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~--~~~   75 (311)
                      +..+||||||+.+.++    +++++++|.+||+++|||||+||||+.+++++++++++.||+||.|+|++|....  +.+
T Consensus        42 ~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~  121 (349)
T d1gp6a_          42 DGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI  121 (349)
T ss_dssp             CSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBC
T ss_pred             CCCCCCEEECHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
T ss_conf             88986728872027989899999999999999838889997249799999999999999981999887553101355875


Q ss_pred             CCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             41345553003566652000001104555666322001366567443214489999999999999998889998632888
Q T0573            76 RGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE  155 (311)
Q Consensus        76 rGy~~~~~e~~~~~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~  155 (311)
                      +||.....+..  ....++.+.+... .     .......+|+||+..+.|++.+++|+++|..++.+|+++++++||++
T Consensus       122 ~~~g~~~~~~~--~~~~~~~~~~~~~-~-----~~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~  193 (349)
T d1gp6a_         122 QGYGSKLANNA--SGQLEWEDYFFHL-A-----YPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLE  193 (349)
T ss_dssp             SEEECCCCCST--TCCCCSCEEEEEE-E-----ESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCCCCCCCCC--CCCCCHHHHHCCC-C-----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             54466455565--6542022210011-2-----22222463222235503789999999999999875167789870997


Q ss_pred             HHHHHHHHC---CCCHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCCEEEECHH
Q ss_conf             013578652---77301032203565763101775688886438998415778621352388458863179717987113
Q T0573           156 RDFFKPTVQ---DGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGD  232 (311)
Q Consensus       156 ~~~f~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTll~qd~~~GLqv~~~~g~W~~V~p~~~~liVniGd  232 (311)
                      +++|.+.+.   ...+.||++|||+++.+...+|+++|||+|+||||+|++++||||+ .+|+|++|+|.+|++|||+||
T Consensus       194 ~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~-~~g~W~~V~p~~~a~vVNvGD  272 (349)
T d1gp6a_         194 PDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGD  272 (349)
T ss_dssp             TTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECH
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCEEEE-CCCCEEECCCCCCCEEEEHHH
T ss_conf             7777777514555200256403566531110125566778761588720677634662-289668734798985663876


Q ss_pred             HHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEE-ECCHHHCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             45330488650572056327544357751488874268999767-150654288777667885018999999999
Q T0573           233 MLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEI-KTLQNCVTAENPDRYPESITADEFLQQRLR  306 (311)
Q Consensus       233 ~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p~~d~~i-~p~~~~~~~~~~~~~~~~~t~~e~~~~r~~  306 (311)
                      +||+||||+||||+|||+.|+.    .+|||++||++|+.|++| .|+++|+++++|++| +++|++||+++|+.
T Consensus       273 ~l~~~TnG~~~St~HRVv~~~~----~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y-~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         273 TLEILSNGKYKSILHRGLVNKE----KVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKF-PPRTFAQHIEHKLF  342 (349)
T ss_dssp             HHHHHTTTSSCCCCEEECCCSS----CCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSS-CCEEHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCCCCCCCCCCC----CCEEEEEEEECCCCCCEEECCCHHHCCCCCCCCC-CCCCHHHHHHHHHH
T ss_conf             8889849970376765417999----9869999884489864252388787299887778-97029999999971


No 2  
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]}
Probab=100.00  E-value=0  Score=511.18  Aligned_cols=281  Identities=21%  Similarity=0.299  Sum_probs=247.9

Q ss_pred             CCCEEEHHHCC-CCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             78801131144-40799999999998738848997379898999999999999863898799999706788641345553
Q T0573             5 AIDPVSFSLYA-KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGV   83 (311)
Q Consensus         5 ~iP~IDls~~~-~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~~~~rGy~~~~~   83 (311)
                      +||+|||+.++ .|+++++++|.+||+++|||||+||||+.+++++++++++.||++|.|+|+++......++||.+.. 
T Consensus         2 ~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~~~~-   80 (307)
T d1w9ya1           2 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV-   80 (307)
T ss_dssp             CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG-
T ss_pred             CCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC-
T ss_conf             9894887026995799999999999874938999847979999999999999987071777655403788876754424-


Q ss_pred             EECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             00356665200000110455566632200136656744321448999999999999999888999863288801357865
Q T0573            84 ETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTV  163 (311)
Q Consensus        84 e~~~~~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~  163 (311)
                            ...|++|.|.+...        .....+.||+.+++|++.+++|++.|.+++.+|+++++++||+++++|.+.+
T Consensus        81 ------~~~d~~e~~~~~~~--------~~~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~  146 (307)
T d1w9ya1          81 ------TDMDWESTFFLKHL--------PISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAF  146 (307)
T ss_dssp             ------GGCCCCEEEEEEEE--------SCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred             ------CCCCHHHHCCCCCC--------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             ------45670430222332--------2457666876655778999999998878777799999987098667777654


Q ss_pred             C---CCCHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCC-CCCCEEEECCCCEEEEEECCCCEEEECHHHHHHCCC
Q ss_conf             2---773010322035657631017756888864389984157-786213523884588631797179871134533048
Q T0573           164 Q---DGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAE-EGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTN  239 (311)
Q Consensus       164 ~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTll~qd~-~~GLqv~~~~g~W~~V~p~~~~liVniGd~l~~~Tn  239 (311)
                      .   ...+.+|++||||++.++...|+++|||+|+||||+|++ ++||||+ ++|+|++|+|.||++|||+||+||+|||
T Consensus       147 ~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~-~~g~Wi~v~p~~~~~vVnvGD~l~~~Tn  225 (307)
T d1w9ya1         147 YGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITN  225 (307)
T ss_dssp             HTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHTT
T ss_pred             HCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE-CCCCEEEECCCCCEEEEECCHHHHHHHC
T ss_conf             001355500001378999531100002466666445886206887837993-3993798216898489980366677628


Q ss_pred             CEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCHHHCC---CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             865057205632754435775148887426899976715065428---8777667885018999999999
Q T0573           240 NVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVT---AENPDRYPESITADEFLQQRLR  306 (311)
Q Consensus       240 G~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~---~~~~~~~~~~~t~~e~~~~r~~  306 (311)
                      |+||||+|||+.++    +.+||||+||++|+.|++|.|+++|++   +++|++| +++|++||++.|++
T Consensus       226 g~~kSt~HRVv~~~----~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y-~~~t~~ey~~~~~~  290 (307)
T d1w9ya1         226 GKYKSVMHRVIAQK----DGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVY-PKFVFDDYMKLYAG  290 (307)
T ss_dssp             TSSCCCCEEECCCS----SSCCEEEEEEEECCTTCEECCCGGGC--------CCC-CCEEHHHHHHTTTT
T ss_pred             CCCCCCCCEEECCC----CCCCEEEEEEEECCCCCEEECCHHHHCCCCCCCCCCC-CCEEHHHHHHHHHH
T ss_conf             84557675350379----9972788998617999889678788335476677779-97419999999985


No 3  
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]}
Probab=100.00  E-value=0  Score=495.78  Aligned_cols=298  Identities=22%  Similarity=0.316  Sum_probs=245.2

Q ss_pred             CCCCCCCEEEHHHCCC----CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC--CC
Q ss_conf             9766788011311444----07999999999987388489973798989999999999998638987999997067--88
Q T0573             1 MSTSAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GG   74 (311)
Q Consensus         1 ms~~~iP~IDls~~~~----d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~--~~   74 (311)
                      ||.++||+|||+.+.+    ++.+++++|.+||+++|||||+||||+.+++.++.+.  .||.+|.|+|.++....  ..
T Consensus         2 ~s~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~~i~~~~~~--ff~~l~~eek~~~~~~~~~~~   79 (329)
T d1odma_           2 VSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGINVQRLSQKTKE--FHMSITPEEKWDLAIRAYNKE   79 (329)
T ss_dssp             CCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCCCHHHHHHHHHH--HHHHCCHHHHHHHBCTTTCTT
T ss_pred             CCCCCCCCEECHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHH--HCCCCCHHHHHHHCCCCCCCC
T ss_conf             987898808865516989899999999999998768589999489899999999998--634389888876323443456


Q ss_pred             CCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCC----CHHHCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             64134555300356665200000110455566632----2001366567443--21448999999999999999888999
Q T0573            75 ARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHR----FRAHMADNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAI  148 (311)
Q Consensus        75 ~rGy~~~~~e~~~~~~~~D~~E~~~~~~~~~~~~~----~~~~~~~n~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~l  148 (311)
                      .+||.+.+.... ..+..+.++++....+......    ......+|+||++  +|+||+.+++|+++|.+|+.+||+++
T Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~la~~ll~~l  158 (329)
T d1odma_          80 HQDQVRAGYYLS-IPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGY  158 (329)
T ss_dssp             CTTCSSSEEECC-BTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHH
T ss_conf             787555453015-7886553111002333342100012357765666686424462399999999987400010005666


Q ss_pred             HHHCCCCHHHHHHHHCC--CCHHHHHHHCCC---CCCC-------HHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCE
Q ss_conf             86328880135786527--730103220356---5763-------10177568888643899841577862135238845
Q T0573           149 ATYLKLERDFFKPTVQD--GNSVLRLLHYPP---IPKD-------ATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQW  216 (311)
Q Consensus       149 a~~Lgl~~~~f~~~~~~--~~~~lr~~~Yp~---~~~~-------~~~~~~~~HtD~g~lTll~qd~~~GLqv~~~~g~W  216 (311)
                      +++||+++++|.+++..  +.+.+|++|||+   ++++       ..++|+++|||+|+||||+||+++||||++.+| |
T Consensus       159 a~~Lgl~~~~f~~~~~~~~~~~~~~~l~y~~~~~~~~~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~~-W  237 (329)
T d1odma_         159 ALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAG-Y  237 (329)
T ss_dssp             HHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETTE-E
T ss_pred             HHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCC-C
T ss_conf             764185378899876322300023201355679997011033334666433367776533202114510121233678-4


Q ss_pred             EEEEECCCCEEEECHHHHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCHHHCCCCCCCCCCCCCC
Q ss_conf             88631797179871134533048865057205632754435775148887426899976715065428877766788501
Q T0573           217 LPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESIT  296 (311)
Q Consensus       217 ~~V~p~~~~liVniGd~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~~~~~~~~~t  296 (311)
                      ++|+|.||++|||+||+||+||||+||||+|||+.++     .+|||++||++|+.|++|.|++++.. ..+..| +++|
T Consensus       238 ~~v~~~~~~~vVN~Gd~l~~~Tng~~kst~HRV~~~~-----~~R~Si~~F~~P~~d~~i~pl~~~~~-~~~~~~-~~~~  310 (329)
T d1odma_         238 QDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVN-----AERQSLPFFVNLGYDSVIDPFDPREP-NGKSDR-EPLS  310 (329)
T ss_dssp             EECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCC-----SCEEEEEEEECCCTTCBCCCCCTTST-TCCCSS-CCCB
T ss_pred             EEECCCCCEEEEEHHHHHHHHHCCEECCCCCEECCCC-----CCEEEEEEEECCCCCCEEECCCCCCC-CCCCCC-CCCC
T ss_conf             2554666537886324678872998148776126999-----89788999877899988957764687-776667-9923


Q ss_pred             HHHHHHHHHHHHC
Q ss_conf             8999999999853
Q T0573           297 ADEFLQQRLREIK  309 (311)
Q Consensus       297 ~~e~~~~r~~~~~  309 (311)
                      ++||+++|+.++.
T Consensus       311 ~~e~l~~~l~~~~  323 (329)
T d1odma_         311 YGDYLQNGLVSLI  323 (329)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999999999


No 4  
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=100.00  E-value=0  Score=486.66  Aligned_cols=286  Identities=20%  Similarity=0.304  Sum_probs=238.8

Q ss_pred             CCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC--CCCCCCC
Q ss_conf             97667880113114440799999999998738848997379898999999999999863898799999706--7886413
Q T0573             1 MSTSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV--KGGARGY   78 (311)
Q Consensus         1 ms~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~--~~~~rGy   78 (311)
                      |++ +||||||+.+.+..  .+++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...  ...+|||
T Consensus         1 m~~-siPvIDl~~l~~~~--~~e~l~~A~~~~GFf~l~nHGi~~~~i~~~~~~~~~fF~lp~e~kk~~~~~~~~~~~rGy   77 (311)
T d1dcsa_           1 MDT-TVPTFSLAELQQGL--HQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGF   77 (311)
T ss_dssp             CCC-CCCEEEHHHHHTTC--SHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEE
T ss_pred             CCC-CCCEEECHHHCCCC--HHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCHHEECCCCCCCCCC
T ss_conf             998-87878854416966--899999998778399999189899999999999999973967762211005555765530


Q ss_pred             CCCCCEECCC----CCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             4555300356----665200000110455566632200136656744321448999999999999999888999863288
Q T0573            79 IPFGVETAKG----ADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKL  154 (311)
Q Consensus        79 ~~~~~e~~~~----~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl  154 (311)
                      ++.+.|....    ....|++|+|.++            ..+|+||.  ++|++.+.+|++.|.+++.+|+++++++||+
T Consensus        78 ~~~~~e~~~~~~~~~~~~d~~~~~~~~------------~~~n~wP~--~~f~~~~~~~~~~~~~l~~~ll~~la~~lgl  143 (311)
T d1dcsa_          78 TGLESESTAQITNTGSYSDYSMCYSMG------------TADNLFPS--GDFERIWTQYFDRQYTASRAVAREVLRATGT  143 (311)
T ss_dssp             EEC-----------------CEEEEEC------------SSSCCCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEECCCCCCCCCCCCCCHHHCCC------------CCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             566530013456855444321000145------------56765666--0379999999999999999999998764267


Q ss_pred             CHHHHHHHHCCCCHHHHHHHCCCCCC----CHHCCCCCCCCCCCEEEEEECCCCC-C---CEEEECCCCEEEEEECCCCE
Q ss_conf             80135786527730103220356576----3101775688886438998415778-6---21352388458863179717
Q T0573           155 ERDFFKPTVQDGNSVLRLLHYPPIPK----DATGVRAGAHGDINTITLLLGAEEG-G---LEVLDRDGQWLPINPPPGCL  226 (311)
Q Consensus       155 ~~~~f~~~~~~~~~~lr~~~Yp~~~~----~~~~~~~~~HtD~g~lTll~qd~~~-G---Lqv~~~~g~W~~V~p~~~~l  226 (311)
                      ++++|.+.+.++.+.+|++|||||++    ++..+|+++|||+|+||||+||.++ |   ||+. .+|+|++|+|.||++
T Consensus       144 ~~~~~~~~~~~~~~~lRl~~YP~~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~g~~~lq~~-~~g~W~~V~p~pg~l  222 (311)
T d1dcsa_         144 EPDGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAE-VGGAFTDLPYRPDAV  222 (311)
T ss_dssp             CCTTCHHHHHSCCCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEE-ETTEEEECCCCTTCE
T ss_pred             CCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEEEC-CCCCEEEEECCCCEE
T ss_conf             6114567641540021102467744445577530111366677503688304788860488751-676237874478879


Q ss_pred             EEECHHHHHHCCCCEEECCCCEEECCCCCC-CCCCCEEEEEECCCCCCCEEEC-CHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             987113453304886505720563275443-5775148887426899976715-06542887776678850189999999
Q T0573           227 VINIGDMLERLTNNVLPSTVHRVVNPPPER-RGVPRYSTPFFLHFASDYEIKT-LQNCVTAENPDRYPESITADEFLQQR  304 (311)
Q Consensus       227 iVniGd~l~~~TnG~~ks~~HRV~~p~~~~-~~~~R~S~~~F~~p~~d~~i~p-~~~~~~~~~~~~~~~~~t~~e~~~~r  304 (311)
                      |||+||+||+||||+|||++|||+.|+..+ .+.+|||++||++|+.|++|.| +......+....+ +..|+++|+.+.
T Consensus       223 vVNvGD~l~~~TnG~~~S~~HRVv~p~~~~~~~~~R~Si~~F~~P~~d~~i~pP~~~~~~~~~~~~~-~~~~~~~~~~~~  301 (311)
T d1dcsa_         223 LVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFSVPLARECGFDVSLDG-ETATFQDWIGGN  301 (311)
T ss_dssp             EEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEEHHHHHHTTCCCCCCS-SEEEHHHHHCSS
T ss_pred             EEECCHHHHHHHCCEECCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCC-CCCCHHHHHHHH
T ss_conf             9987879987719980487866768865668998779999997179997878876100366777789-998788888899


Q ss_pred             H
Q ss_conf             9
Q T0573           305 L  305 (311)
Q Consensus       305 ~  305 (311)
                      +
T Consensus       302 y  302 (311)
T d1dcsa_         302 Y  302 (311)
T ss_dssp             C
T ss_pred             H
T ss_conf             9


No 5  
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} SCOP: d1unba_ d1rxga_ d1uoga_ d1hjfa_ d1e5ha_ d1rxfa_ d1hjga_ d1e5ia_ d1w2ax_ d1w28a_
Probab=100.00  E-value=0  Score=468.36  Aligned_cols=292  Identities=17%  Similarity=0.231  Sum_probs=236.5

Q ss_pred             CCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC--CCCCCC
Q ss_conf             976678801131144407999999999987388489973798989999999999998638987999997067--886413
Q T0573             1 MSTSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GGARGY   78 (311)
Q Consensus         1 ms~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~eeK~~~~~~~--~~~rGy   78 (311)
                      ||+ +||+|||+.+.+..  .+++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++....  ..++||
T Consensus         1 m~~-~IP~IDls~l~~~~--~~~~l~~A~~~~GFf~l~nHGI~~eli~~~~~~~~~fF~lp~e~k~k~~~~~~~~~~~g~   77 (311)
T d1dcsa_           1 MDT-TVPTFSLAELQQGL--HQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGF   77 (311)
T ss_dssp             CCC-CCCEEEHHHHHTTC--SHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEE
T ss_pred             CCC-CCCEEEHHHCCCCC--HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
T ss_conf             988-66644311045852--789999998628758998489898999999999999862886686765227788752114


Q ss_pred             CCCCCEECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             45553003566652000001104555666322001366567443214489999999999999998889998632888013
Q T0573            79 IPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDF  158 (311)
Q Consensus        79 ~~~~~e~~~~~~~~D~~E~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~  158 (311)
                      .+.+.+....  ..+.++.+.+....        ....+.||...++|++.+++|++.|.+++..|+++++++||+++++
T Consensus        78 ~~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~y~~~~~~l~~~ll~~i~~~Lg~~~~~  147 (311)
T d1dcsa_          78 TGLESESTAQ--ITNTGSYSDYSMCY--------SMGTADNLFPSGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDG  147 (311)
T ss_dssp             EEC-------------------CEEE--------EECSSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred             CCCCCCCCCC--CCCCCCCCCCCCCC--------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             5544323344--35643111024301--------2566533466500479999999999999999999989750775035


Q ss_pred             HHHHHCCCCHHHHHHHCCCCCC----CHHCCCCCCCCCCCEEEEEECCCCCCCEEE---ECCCCEEEEEECCCCEEEECH
Q ss_conf             5786527730103220356576----310177568888643899841577862135---238845886317971798711
Q T0573           159 FKPTVQDGNSVLRLLHYPPIPK----DATGVRAGAHGDINTITLLLGAEEGGLEVL---DRDGQWLPINPPPGCLVINIG  231 (311)
Q Consensus       159 f~~~~~~~~~~lr~~~Yp~~~~----~~~~~~~~~HtD~g~lTll~qd~~~GLqv~---~~~g~W~~V~p~~~~liVniG  231 (311)
                      +.+.+.++.+.+|++||||++.    ++..+|+++|||+|+||||+||+++||++.   ..+|+|++|+|.||++|||+|
T Consensus       148 ~~~~~~~~~~~~r~~~Ypp~~~~~~~~~~~~g~~~HtD~g~lTlL~q~~~~gg~~~l~~~~~g~W~~v~p~~~~~iVN~G  227 (311)
T d1dcsa_         148 GVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCG  227 (311)
T ss_dssp             CHHHHHSCCCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEEC
T ss_pred             HHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCEEEEECCCCCEEEEHH
T ss_conf             67776213310110000047731134435440001378608999961478897304411568835775217982698677


Q ss_pred             HHHHHCCCCEEECCCCEEECCCCCC-CCCCCEEEEEECCCCCCCEEEC-CHHHCCC-----CCCCCCCCCCCHHHHHHHH
Q ss_conf             3453304886505720563275443-5775148887426899976715-0654288-----7776678850189999999
Q T0573           232 DMLERLTNNVLPSTVHRVVNPPPER-RGVPRYSTPFFLHFASDYEIKT-LQNCVTA-----ENPDRYPESITADEFLQQR  304 (311)
Q Consensus       232 d~l~~~TnG~~ks~~HRV~~p~~~~-~~~~R~S~~~F~~p~~d~~i~p-~~~~~~~-----~~~~~~~~~~t~~e~~~~r  304 (311)
                      |+||+||||+|||++|||+.|+..+ ...+|||++||++|+.|++|.| ++..+..     +.+++| +++|++||++.|
T Consensus       228 d~L~~~T~g~~~s~~HRVv~p~~~~~~~~~R~S~~~F~~P~~d~~i~pp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r  306 (311)
T d1dcsa_         228 AIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFSVPLARECGFDVSLDGETATF-QDWIGGNYVNIR  306 (311)
T ss_dssp             HHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEEHHHHHHTTCCCCCCSSEEEH-HHHHCSSCCCEE
T ss_pred             HHHHHHCCCEEECCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCCCHHHCCCCCCCCCCCCC-CCCCHHHHHHHH
T ss_conf             9999870890503502686478676456652268887538998178367511105554578888636-530078899999


Q ss_pred             HH
Q ss_conf             99
Q T0573           305 LR  306 (311)
Q Consensus       305 ~~  306 (311)
                      ++
T Consensus       307 ~~  308 (311)
T d1dcsa_         307 RT  308 (311)
T ss_dssp             CC
T ss_pred             HH
T ss_conf             75


No 6  
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.65  E-value=0.08  Score=30.49  Aligned_cols=81  Identities=23%  Similarity=0.217  Sum_probs=51.2

Q ss_pred             HHHHCCCCCCCHHCCCCCCCCCCC--------EEEEEECCCCCCCEEEE----------CCCCEEEEEECCCCEEEECHH
Q ss_conf             322035657631017756888864--------38998415778621352----------388458863179717987113
Q T0573           171 RLLHYPPIPKDATGVRAGAHGDIN--------TITLLLGAEEGGLEVLD----------RDGQWLPINPPPGCLVINIGD  232 (311)
Q Consensus       171 r~~~Yp~~~~~~~~~~~~~HtD~g--------~lTll~qd~~~GLqv~~----------~~g~W~~V~p~~~~liVniGd  232 (311)
                      .+++|+.     .+-++++|.|--        .++|-+-.. .-+.++.          .+.+++.|+-.+|+++|.-|+
T Consensus       108 ~ln~Y~~-----~~~~I~~H~D~~~~~~~~~~I~slSlG~~-~~~~~r~~~~~~~~~~~~~~~~~~i~L~~gsl~vm~g~  181 (210)
T d2iuwa1         108 LCNLYRN-----EKDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGA  181 (210)
T ss_dssp             EEEEECS-----TTCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEEET
T ss_pred             HHHCCCC-----CCCCCCCCCCCCHHCCCCCCEEEEEECCC-EEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCH
T ss_conf             3210026-----89762267288443056874368861781-68877221122468866777328997699998995823


Q ss_pred             HHHHCCCCEEECCCCEEECCCCCCCCCCCEEEEEE
Q ss_conf             45330488650572056327544357751488874
Q T0573           233 MLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFF  267 (311)
Q Consensus       233 ~l~~~TnG~~ks~~HRV~~p~~~~~~~~R~S~~~F  267 (311)
                      +=..|+        |.|  |+.......|+|+.|=
T Consensus       182 ~~~~~~--------H~I--p~~~~~~~~RiSlTfR  206 (210)
T d2iuwa1         182 TQADWQ--------HRV--PKEYHSREPRVNLTFR  206 (210)
T ss_dssp             HHHHEE--------EEE--CCCSSCCCCEEEEEEE
T ss_pred             HHCCEE--------CCC--CCCCCCCCCEEEEEEE
T ss_conf             437207--------347--7668999982899987


No 7  
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]}
Probab=79.10  E-value=2.2  Score=20.46  Aligned_cols=113  Identities=18%  Similarity=0.226  Sum_probs=57.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHCCCCCCCC--
Q ss_conf             366567443214489999999999999998889998632888013578652773010322035657631017756888--
Q T0573           114 MADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHG--  191 (311)
Q Consensus       114 ~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~Ht--  191 (311)
                      .....||..++.+.+.++.+.               ...+.+.       ...++.+ +|+|++-      -++++|-  
T Consensus        70 ~~~~~wp~iP~~l~~L~~~~~---------------~~~~~~~-------~~pn~~L-vN~Y~~G------~~~~~h~dd  120 (200)
T d2fdia1          70 QTNKPWPAMPQSFHNLCQRAA---------------TAAGYPD-------FQPDACL-INRYAPG------AKLSLHQDK  120 (200)
T ss_dssp             TTSSBCCCCCHHHHHHHHHHH---------------HHHTCTT-------CCCSEEE-EEEECTT------CCEEEECCC
T ss_pred             CCCCCCCCCCHHHHHHHHHHH---------------HHCCCCC-------CCCCEEE-EEEECCC------CCCCCCCCC
T ss_conf             889989986478999999999---------------8747875-------4877668-9774699------976656138


Q ss_pred             ---CCC--EEEEEECCCCCC-CEEE--ECCCCEEEEEECCCCEEEECHHHHHHCCCCEEECCCCEEECCC---CCCCCCC
Q ss_conf             ---864--389984157786-2135--2388458863179717987113453304886505720563275---4435775
Q T0573           192 ---DIN--TITLLLGAEEGG-LEVL--DRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPP---PERRGVP  260 (311)
Q Consensus       192 ---D~g--~lTll~qd~~~G-Lqv~--~~~g~W~~V~p~~~~liVniGd~l~~~TnG~~ks~~HRV~~p~---~~~~~~~  260 (311)
                         |++  .++|-+.+  +. .++.  .+.+.+..+.-.+|+++|.-|++ +.|.        |.|-.-.   .......
T Consensus       121 dE~~~~~pIvslSLG~--~~~f~f~~~~~~~~~~~~~L~~Gdllvm~G~~-r~~~--------H~V~~~~~~~~~~~~~~  189 (200)
T d2fdia1         121 DEPDLRAPIVSVSLGL--PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLFY--------HGIQPLKAGFHPLTIDC  189 (200)
T ss_dssp             CSSCTTSCEEEEEEES--CEEEEECCSSTTSCCEEEEECTTCEEEECGGG-GGCC--------EEECCCCCCCBTTTBTC
T ss_pred             CCCCCCCCCEEEEEEC--CEEEEECCCCCCCCEEEEECCCCCEEEECCCH-HHEE--------ECCCCCCCCCCCCCCCC
T ss_conf             7432579845999847--73688436646871289975898889968536-6148--------43773047878888997


Q ss_pred             CEEEEE
Q ss_conf             148887
Q T0573           261 RYSTPF  266 (311)
Q Consensus       261 R~S~~~  266 (311)
                      |+|+.|
T Consensus       190 RislTf  195 (200)
T d2fdia1         190 RYNLTF  195 (200)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
T ss_conf             489998


No 8  
>d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]}
Probab=70.65  E-value=2.2  Score=20.49  Aligned_cols=54  Identities=19%  Similarity=0.175  Sum_probs=41.6

Q ss_pred             CCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf             667880113114440799999999998738848997379898999999999999863
Q T0573             3 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFA   59 (311)
Q Consensus         3 ~~~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~   59 (311)
                      .+-||.|||+.+.+..  +-+++.+..++.||..|.| -||.+.+.+..+...+|.+
T Consensus        56 ~~iIPeI~F~dI~~~~--~~~~~~~~IkrrG~vVIRn-V~p~e~a~~w~~~l~~Yle  109 (417)
T d2csga1          56 QPVWPIIPFSELAMGN--ISDATRAEVKRRGCAVIKG-HFPREQALAWDQSMLDYLD  109 (417)
T ss_dssp             CCSSCBCCHHHHHTTC--CCHHHHHHHHHHSEEEETT-SSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEHHHHHCCC--CCHHHHHHHHHCCEEEECC-CCCHHHHHHHHHHHHHHHH
T ss_conf             9985065589952678--9989999998618899888-7899999999999999998


No 9  
>d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=53.06  E-value=4  Score=18.68  Aligned_cols=15  Identities=13%  Similarity=-0.028  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             899999999999986
Q T0573            44 QARIDAAVDSAKAFF   58 (311)
Q Consensus        44 ~~li~~~~~~~~~fF   58 (311)
                      .++++++...++.++
T Consensus         4 ~e~~~el~~~~~~l~   18 (232)
T d1pvta_           4 RETIREIQKVAYWLA   18 (232)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             999999999999999


No 10 
>d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]}
Probab=50.10  E-value=3.8  Score=18.82  Aligned_cols=11  Identities=0%  Similarity=0.202  Sum_probs=3.8

Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999998
Q T0573            47 IDAAVDSAKAF   57 (311)
Q Consensus        47 i~~~~~~~~~f   57 (311)
                      ++++..+++.+
T Consensus        10 ~~~~~~~~~~~   20 (274)
T d1ojra_          10 VQGMIKATTDA   20 (274)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999999


No 11 
>d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]}
Probab=36.09  E-value=9.3  Score=16.08  Aligned_cols=11  Identities=9%  Similarity=0.220  Sum_probs=3.9

Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999998
Q T0573            47 IDAAVDSAKAF   57 (311)
Q Consensus        47 i~~~~~~~~~f   57 (311)
                      .+++...++.+
T Consensus         7 ~~~l~~~~r~l   17 (206)
T d1e4cp_           7 ARQIIDTCLEM   17 (206)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999999


No 12 
>d2nrka1 d.218.1.14 (A:4-170) Hypothetical protein GrpB {Enterococcus faecalis [TaxId: 1351]}
Probab=29.93  E-value=5.2  Score=17.86  Aligned_cols=37  Identities=22%  Similarity=0.472  Sum_probs=18.6

Q ss_pred             CCCEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCC
Q ss_conf             78801131144407999999999987388489973798
Q T0573             5 AIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDL   42 (311)
Q Consensus         5 ~iP~IDls~~~~d~~~~~~~l~~A~~~~Gff~l~nHGI   42 (311)
                      .-|+||+...-++-..+ ..+.++++..||.+.-++|+
T Consensus        44 AKpiIDI~v~V~~~~~~-~~~~~~L~~lGy~~~~~~~~   80 (167)
T d2nrka1          44 AKPIIDFLVIVEEIEKV-DLLQWEFERIGYEYMGEFGL   80 (167)
T ss_dssp             BCSCEEEEEEESCSGGG-GGGHHHHHHTTCEECTTTTS
T ss_pred             CCCEEEEEEEECCHHHH-HHHHHHHHHCCCEECCCCCC
T ss_conf             68724789861683669-99999998659787376788


No 13 
>d1r3sa_ c.1.22.1 (A:) Uroporphyrinogen decarboxylase, UROD {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.78  E-value=20  Score=13.72  Aligned_cols=10  Identities=10%  Similarity=0.272  Sum_probs=4.1

Q ss_pred             HHHHHHCCEE
Q ss_conf             9998738848
Q T0573            26 GASFERYGFA   35 (311)
Q Consensus        26 ~~A~~~~Gff   35 (311)
                      ....+++|+=
T Consensus        60 l~p~~~~~~D   69 (356)
T d1r3sa_          60 LQPLRRFPLD   69 (356)
T ss_dssp             HHHHHHSCCS
T ss_pred             HHHHHHCCCC
T ss_conf             4489867954


No 14 
>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}
Probab=23.05  E-value=21  Score=13.62  Aligned_cols=13  Identities=8%  Similarity=0.102  Sum_probs=4.2

Q ss_pred             HHHHHHCCEEEEE
Q ss_conf             9998738848997
Q T0573            26 GASFERYGFAVLS   38 (311)
Q Consensus        26 ~~A~~~~Gff~l~   38 (311)
                      .+.|.+.|.=.|+
T Consensus        58 l~~~~~~~~p~Vi   70 (128)
T d1vm6a3          58 VDLCKKYRAGLVL   70 (128)
T ss_dssp             HHHHHHHTCEEEE
T ss_pred             HHHHHHCCCCEEE
T ss_conf             9998745997799


No 15 
>d1l6ja1 a.20.1.2 (A:29-105) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.50  E-value=23  Score=13.42  Aligned_cols=38  Identities=16%  Similarity=0.287  Sum_probs=26.2

Q ss_pred             HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCH
Q ss_conf             99998738848997379898999999999999863898
Q T0573            25 LGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPV   62 (311)
Q Consensus        25 l~~A~~~~Gff~l~nHGI~~~li~~~~~~~~~fF~lP~   62 (311)
                      ..+-++++|+.--.+.+-....+.++....++||.||.
T Consensus        17 a~~yL~~fGYl~~~~~~~~~~~~~~AIk~fQ~f~gL~v   54 (77)
T d1l6ja1          17 AEEYLYRYGYTRVAEMRGESKSLGPALLLLQKQLSLPE   54 (77)
T ss_dssp             HHHHHHHTTCC-----------CHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf             99999983899877766451999999999999839998


No 16 
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.23  E-value=23  Score=13.38  Aligned_cols=40  Identities=23%  Similarity=0.380  Sum_probs=25.7

Q ss_pred             CCCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCCEEEEC
Q ss_conf             888864389984157786213523884588631797179871
Q T0573           189 AHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINI  230 (311)
Q Consensus       189 ~HtD~g~lTll~qd~~~GLqv~~~~g~W~~V~p~~~~liVni  230 (311)
                      -|+|--..=+|  ++.+=.+|...++.|+.|...+|-+|+.-
T Consensus        89 ~H~~~Evr~vl--~G~G~f~v~~~~~~~iri~~~~GDli~iP  128 (179)
T d1vr3a1          89 LHLDEEIRYIL--EGSGYFDVRDKEDKWIRISMEKGDMITLP  128 (179)
T ss_dssp             ECSSCEEEEEE--EEEEEEEEECTTSCEEEEEEETTEEEEEC
T ss_pred             ECCCCEEEEEE--ECCEEEEEECCCCCEEEEEEECCCEEEEC
T ss_conf             37884799999--57599999889982999998379889969


Done!