Query T0575 YP_001636308.1, CHLOROFLEXUS AURANTIACUS, 216 residues
Match_columns 216
No_of_seqs 285 out of 18403
Neff 11.4
Searched_HMMs 15564
Date Fri Jun 4 14:56:36 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0575.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0575.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gfna1 a.4.1.9 (A:4-80) Proba 99.5 9.1E-14 5.9E-18 123.4 9.4 73 9-81 3-75 (77)
2 d2fd5a1 a.4.1.9 (A:1-76) Proba 99.5 1.2E-13 7.7E-18 122.5 8.8 69 10-78 5-73 (76)
3 d1t56a1 a.4.1.9 (A:22-94) Ethr 99.5 2.2E-13 1.4E-17 120.4 9.7 69 11-79 2-70 (73)
4 d1v7ba1 a.4.1.9 (A:1-74) Trans 99.4 2E-13 1.3E-17 120.8 8.8 70 10-79 2-71 (74)
5 d2g7sa1 a.4.1.9 (A:3-76) Putat 99.4 2.3E-13 1.5E-17 120.2 9.0 69 10-78 2-70 (74)
6 d2o7ta1 a.4.1.9 (A:1-78) Trans 99.4 2.6E-13 1.7E-17 119.8 9.0 70 10-79 5-74 (78)
7 d1t33a1 a.4.1.9 (A:1-88) Putat 99.4 1.7E-13 1.1E-17 121.3 7.5 76 1-77 1-76 (88)
8 d2fbqa1 a.4.1.9 (A:2-80) Trans 99.4 2.7E-13 1.7E-17 119.7 7.9 72 11-82 3-74 (79)
9 d1ui5a1 a.4.1.9 (A:5-75) A-fac 99.4 4.2E-13 2.7E-17 118.3 8.5 65 10-74 3-67 (71)
10 d1rkta1 a.4.1.9 (A:2-82) Hypot 99.4 7.8E-13 5E-17 116.2 9.7 70 10-79 9-78 (81)
11 d2oi8a1 a.4.1.9 (A:8-86) Putat 99.4 7.8E-13 5E-17 116.2 9.6 71 10-80 7-77 (79)
12 d3c07a1 a.4.1.9 (A:15-89) Puta 99.4 3.6E-13 2.3E-17 118.8 7.8 70 10-79 3-72 (75)
13 d1vi0a1 a.4.1.9 (A:6-77) Hypot 99.4 9.9E-13 6.4E-17 115.4 9.3 68 13-80 2-69 (72)
14 d1pb6a1 a.4.1.9 (A:14-85) Hypo 99.4 8E-13 5.1E-17 116.1 8.3 67 11-77 3-69 (72)
15 d2hkua1 a.4.1.9 (A:18-87) Puta 99.4 9E-13 5.8E-17 115.7 8.2 66 12-78 1-66 (70)
16 d2gena1 a.4.1.9 (A:6-75) Proba 99.4 8.8E-13 5.7E-17 115.7 8.1 67 13-79 1-67 (70)
17 d1sgma1 a.4.1.9 (A:5-77) Putat 99.4 1.1E-12 7.2E-17 115.0 8.3 69 12-80 2-71 (73)
18 d2hyja1 a.4.1.9 (A:8-82) Putat 99.4 1.8E-12 1.2E-16 113.3 9.2 67 10-76 3-69 (75)
19 d1zk8a1 a.4.1.9 (A:6-77) Trans 99.3 2.3E-12 1.5E-16 112.6 8.9 67 13-79 4-70 (72)
20 d2d6ya1 a.4.1.9 (A:7-74) Putat 99.3 8.1E-13 5.2E-17 116.0 6.6 63 11-73 1-63 (68)
21 d1jt6a1 a.4.1.9 (A:2-72) Multi 99.3 1.8E-12 1.1E-16 113.4 8.3 65 13-77 2-66 (71)
22 d2g3ba1 a.4.1.9 (A:2-73) Putat 99.3 9.3E-13 6E-17 115.6 6.6 66 11-76 1-66 (72)
23 d2np5a1 a.4.1.9 (A:9-77) Trans 99.3 2.5E-12 1.6E-16 112.3 8.5 65 13-77 2-66 (69)
24 d2id6a1 a.4.1.9 (A:1-75) Trans 99.3 1E-12 6.4E-17 115.3 6.4 69 12-80 3-71 (75)
25 d2iu5a1 a.4.1.9 (A:1-71) Trans 99.3 4.2E-12 2.7E-16 110.5 9.3 62 10-71 4-65 (71)
26 d2i10a1 a.4.1.9 (A:10-78) Puta 99.3 5.7E-13 3.6E-17 117.3 4.6 66 14-79 2-67 (69)
27 d2fx0a1 a.4.1.9 (A:4-76) Hemol 99.3 1.9E-12 1.2E-16 113.2 7.0 58 10-67 2-59 (73)
28 d2id3a1 a.4.1.9 (A:13-80) Puta 99.3 4.5E-12 2.9E-16 110.3 7.3 62 10-71 4-65 (68)
29 d2fq4a1 a.4.1.9 (A:9-77) Trans 99.3 6.2E-12 4E-16 109.2 7.5 61 10-70 2-62 (69)
30 d1z0xa1 a.4.1.9 (A:4-71) Trans 99.3 5.2E-12 3.3E-16 109.8 6.8 59 13-71 3-62 (68)
31 d2g7la1 a.4.1.9 (A:16-83) Puta 99.2 3.5E-12 2.2E-16 111.2 4.3 61 10-70 2-62 (68)
32 d2vkva1 a.4.1.9 (A:6-67) Tetra 99.2 8.6E-12 5.5E-16 108.1 5.6 58 14-71 1-58 (62)
33 d2g7ga1 a.4.1.9 (A:9-73) Putat 99.1 1.9E-11 1.2E-15 105.5 4.9 57 13-71 2-58 (65)
34 d2np3a1 a.4.1.9 (A:35-99) Puta 99.1 1.5E-11 9.5E-16 106.3 2.7 60 17-77 1-60 (65)
35 d1vi0a2 a.121.1.1 (A:78-194) H 98.7 5.1E-07 3.2E-11 71.2 13.5 117 85-216 1-117 (117)
36 d1pb6a2 a.121.1.1 (A:86-211) H 98.5 2.7E-06 1.7E-10 65.6 12.5 122 84-216 2-126 (126)
37 d2gena2 a.121.1.1 (A:76-193) P 98.1 0.00013 8.4E-09 52.5 14.3 100 85-185 2-102 (118)
38 d2id6a2 a.121.1.1 (A:76-200) T 98.0 0.0012 8E-08 45.0 17.2 124 85-215 2-125 (125)
39 d2hyja2 a.121.1.1 (A:83-200) P 97.8 0.0022 1.4E-07 43.1 16.1 100 85-184 2-105 (118)
40 d2g7sa2 a.121.1.1 (A:77-192) P 97.4 0.0059 3.8E-07 39.7 14.1 90 85-174 2-94 (116)
41 d1jt6a2 a.121.1.1 (A:73-187) M 97.4 0.0054 3.5E-07 40.0 13.5 111 87-214 4-115 (115)
42 d1t56a2 a.121.1.1 (A:95-214) E 97.3 0.01 6.4E-07 37.9 17.1 96 83-179 2-97 (120)
43 d1rkta2 a.121.1.1 (A:83-205) H 97.2 0.013 8.4E-07 37.0 14.9 56 118-173 37-92 (123)
44 d2fq4a2 a.121.1.1 (A:78-192) T 97.1 0.015 9.8E-07 36.5 15.1 113 85-216 2-115 (115)
45 d2g3ba2 a.121.1.1 (A:74-189) P 97.1 0.017 1.1E-06 36.2 13.7 62 116-177 35-96 (116)
46 d2d6ya2 a.121.1.1 (A:75-192) P 97.0 0.0074 4.7E-07 39.0 10.8 81 89-170 3-83 (118)
47 d1zk8a2 a.121.1.1 (A:78-182) T 96.1 0.031 2E-06 34.2 9.3 104 85-214 2-105 (105)
48 d1ijwc_ a.4.1.2 (C:) HIN recom 95.8 0.0046 2.9E-07 40.6 3.7 35 18-56 11-45 (47)
49 d2i10a2 a.121.1.1 (A:79-194) P 95.5 0.018 1.1E-06 36.0 6.0 89 85-173 2-94 (116)
50 d1ui5a2 a.121.1.1 (A:80-212) A 94.9 0.083 5.3E-06 30.8 7.8 83 87-171 4-86 (133)
51 d2id3a2 a.121.1.1 (A:81-203) P 93.4 0.31 2E-05 26.4 15.9 83 83-167 3-88 (123)
52 d1jhfa1 a.4.5.2 (A:2-72) LexA 93.3 0.066 4.2E-06 31.6 4.7 42 12-54 5-47 (71)
53 d2hsga1 a.35.1.5 (A:2-58) Gluc 92.9 0.03 1.9E-06 34.3 2.4 33 32-64 1-33 (57)
54 d2o7ta2 a.121.1.1 (A:79-188) T 92.9 0.13 8.3E-06 29.3 5.7 76 84-164 1-76 (110)
55 d2fbqa2 a.121.1.1 (A:81-214) T 92.9 0.36 2.3E-05 25.9 10.6 121 85-215 5-129 (134)
56 d2jn6a1 a.4.1.19 (A:1-89) Unch 92.7 0.088 5.7E-06 30.6 4.6 43 1-52 1-43 (89)
57 d2ao9a1 a.4.1.17 (A:13-132) Ph 91.5 0.15 9.5E-06 28.9 4.6 47 11-57 15-62 (120)
58 d1t33a2 a.121.1.1 (A:89-220) P 91.4 0.52 3.4E-05 24.6 10.3 98 104-215 27-132 (132)
59 d1efaa1 a.35.1.5 (A:2-60) Lac 91.1 0.036 2.3E-06 33.6 1.2 33 32-64 2-34 (59)
60 d1qpza1 a.35.1.5 (A:2-58) Puri 90.3 0.051 3.3E-06 32.4 1.4 30 33-62 1-30 (57)
61 d1sgma2 a.121.1.1 (A:78-188) P 90.0 0.21 1.4E-05 27.7 4.3 90 84-178 1-94 (111)
62 d1stza1 a.4.5.51 (A:14-100) He 89.8 0.19 1.2E-05 28.1 3.9 46 12-58 4-51 (87)
63 d1biaa1 a.4.5.1 (A:1-63) Bioti 89.4 0.17 1.1E-05 28.4 3.5 41 11-57 4-44 (63)
64 d1bl0a1 a.4.1.8 (A:9-62) MarA 89.3 0.15 9.4E-06 28.9 3.0 41 16-56 3-43 (54)
65 d1jt6b2 a.121.1.1 (B:73-187) M 89.3 0.76 4.9E-05 23.4 11.6 78 119-213 37-114 (115)
66 d1d5ya1 a.4.1.8 (A:3-56) Rob t 89.1 0.084 5.4E-06 30.8 1.7 42 15-56 2-43 (54)
67 d2np5a2 a.121.1.1 (A:78-195) T 88.9 0.81 5.2E-05 23.2 10.0 67 131-212 47-113 (118)
68 d1uxda_ a.35.1.5 (A:) Fructose 88.0 0.069 4.5E-06 31.4 0.6 26 33-58 1-26 (59)
69 d1pdnc_ a.4.1.5 (C:) Paired pr 86.1 0.58 3.7E-05 24.3 4.5 38 8-53 16-53 (123)
70 d1j5ya1 a.4.5.1 (A:3-67) Putat 84.7 0.73 4.7E-05 23.5 4.5 40 10-54 5-44 (65)
71 d1mkma1 a.4.5.33 (A:1-75) Tran 82.9 0.54 3.5E-05 24.5 3.2 32 23-55 12-43 (75)
72 d2ezla_ a.4.1.2 (A:) Ibeta sub 82.9 0.62 4E-05 24.1 3.5 40 14-54 35-75 (99)
73 d1biaa1 a.4.5.1 (A:1-63) Bioti 81.7 0.51 3.3E-05 24.7 2.7 37 12-54 5-41 (63)
74 d2gfna2 a.121.1.1 (A:81-199) P 81.5 1.6 0.00011 20.8 5.2 47 125-171 44-90 (119)
75 d1k78a1 a.4.1.5 (A:19-81) Pax- 81.3 1.3 8.3E-05 21.6 4.6 37 8-52 14-50 (63)
76 d1y9qa1 a.35.1.8 (A:4-82) Prob 80.3 1.1 7E-05 22.2 4.0 53 14-69 6-58 (79)
77 d1z05a1 a.4.5.63 (A:10-80) Tra 80.3 1.3 8.3E-05 21.6 4.4 34 19-54 9-42 (71)
78 d2p4wa1 a.4.5.64 (A:1-194) Tra 79.2 0.69 4.5E-05 23.7 2.7 42 9-57 12-53 (194)
79 d2ev0a1 a.4.5.24 (A:2-62) Mang 79.0 1.8 0.00012 20.4 4.8 38 13-52 4-41 (61)
80 d1ku9a_ a.4.5.36 (A:) DNA-bind 78.8 1.9 0.00012 20.4 4.8 22 31-52 40-61 (151)
81 d1ulya_ a.4.5.58 (A:) Hypothet 78.7 0.53 3.4E-05 24.6 2.0 39 10-55 17-55 (190)
82 d2b5aa1 a.35.1.3 (A:1-77) Regu 78.4 1.4 9.1E-05 21.3 4.1 44 12-58 6-49 (77)
83 d1gdta1 a.4.1.2 (A:141-183) ga 78.2 0.64 4.1E-05 24.0 2.3 26 25-53 14-39 (43)
84 d1r1ua_ a.4.5.5 (A:) Metal-sen 76.8 1.7 0.00011 20.7 4.1 42 7-55 13-54 (94)
85 d1r1ta_ a.4.5.5 (A:) SmtB repr 76.4 0.82 5.3E-05 23.1 2.4 40 9-55 20-59 (98)
86 d1s7oa_ a.4.13.3 (A:) Hypothet 75.6 0.81 5.2E-05 23.2 2.2 32 23-54 23-54 (106)
87 d2fx0a2 a.121.1.1 (A:77-198) H 75.2 2.5 0.00016 19.3 10.4 81 85-167 2-82 (122)
88 d1xsva_ a.4.13.3 (A:) Hypothet 75.1 0.88 5.6E-05 22.9 2.3 36 24-59 26-62 (106)
89 d2isya1 a.4.5.24 (A:2-64) Iron 73.9 2.6 0.00016 19.3 4.4 39 12-52 5-43 (63)
90 d2a6ca1 a.35.1.13 (A:1-69) HTH 73.7 2.1 0.00013 20.0 3.9 43 14-59 4-47 (69)
91 d2o3fa1 a.4.1.20 (A:1-83) Puta 73.6 0.82 5.3E-05 23.1 1.8 35 29-63 33-72 (83)
92 d2oi8a2 a.121.1.1 (A:87-216) P 73.3 2.5 0.00016 19.4 4.2 88 90-178 3-108 (130)
93 d1rp3a2 a.4.13.2 (A:164-234) S 71.9 1.2 7.5E-05 21.9 2.3 30 24-53 29-58 (71)
94 d2o38a1 a.35.1.13 (A:28-116) H 71.1 3.1 0.0002 18.6 4.6 42 12-56 7-48 (89)
95 d1sfxa_ a.4.5.50 (A:) Hypothet 70.6 2 0.00013 20.2 3.2 29 24-54 28-56 (109)
96 d3c07a2 a.121.1.1 (A:90-235) P 70.3 3.2 0.00021 18.5 10.8 97 85-183 2-100 (146)
97 d1hlva1 a.4.1.7 (A:1-66) DNA-b 69.6 3.3 0.00021 18.4 5.4 56 1-63 1-56 (66)
98 d1i1ga1 a.4.5.32 (A:2-61) LprA 68.7 2.4 0.00015 19.5 3.3 31 23-55 10-40 (60)
99 d2v4jc1 d.203.1.1 (C:3-105) Ds 68.7 3.5 0.00022 18.3 4.6 46 12-58 42-87 (103)
100 d1a04a1 a.4.6.2 (A:150-216) Ni 68.5 1.4 9.2E-05 21.3 2.1 25 31-55 20-44 (67)
101 d1xs9a_ i.11.1.1 (A:) Ternary 68.0 0.46 3E-05 25.1 -0.5 47 13-59 8-54 (129)
102 d2d1ha1 a.4.5.50 (A:1-109) Hyp 67.5 3 0.00019 18.7 3.6 30 24-55 30-59 (109)
103 d1or7a1 a.4.13.2 (A:120-187) S 66.7 1.8 0.00011 20.5 2.3 33 21-53 23-55 (68)
104 d1u2wa1 a.4.5.5 (A:12-119) Cad 66.5 2.2 0.00014 19.8 2.7 40 9-54 28-67 (108)
105 d2cfxa1 a.4.5.32 (A:1-63) Tran 66.4 2 0.00013 20.1 2.5 38 12-55 5-42 (63)
106 d2pg4a1 a.4.5.48 (A:1-92) Unch 65.6 2.7 0.00017 19.2 3.0 43 16-62 15-57 (92)
107 d1b0na2 a.35.1.3 (A:1-68) SinR 65.4 1.5 9.6E-05 21.1 1.7 26 31-56 13-38 (68)
108 d1fsea_ a.4.6.2 (A:) Germinati 65.3 1.8 0.00012 20.4 2.1 25 31-55 18-42 (67)
109 d1r8da_ a.6.1.3 (A:) Multidrug 65.2 1.7 0.00011 20.7 2.0 21 33-53 3-23 (109)
110 d1y7ya1 a.35.1.3 (A:5-73) Rest 65.1 1.9 0.00012 20.3 2.2 40 17-59 10-49 (69)
111 d2auwa1 a.35.1.10 (A:88-154) H 65.0 1.8 0.00012 20.4 2.1 28 31-58 13-40 (67)
112 d1r71a_ a.4.14.1 (A:) Transcri 64.4 3.3 0.00021 18.4 3.3 31 21-54 22-52 (114)
113 d1l3la1 a.4.6.2 (A:170-234) Qu 64.1 2 0.00013 20.2 2.1 25 31-55 18-42 (65)
114 d2cg4a1 a.4.5.32 (A:4-66) Regu 63.4 3.5 0.00022 18.3 3.3 37 13-55 6-42 (63)
115 d1r69a_ a.35.1.2 (A:) 434 C1 r 63.1 1.8 0.00012 20.5 1.8 27 31-57 13-39 (63)
116 d1yioa1 a.4.6.2 (A:131-200) Re 62.8 2.1 0.00014 19.9 2.1 24 31-54 26-49 (70)
117 d1bl0a2 a.4.1.8 (A:63-124) Mar 62.5 3.3 0.00021 18.5 3.0 38 18-58 3-41 (62)
118 d1vz0a1 a.4.14.1 (A:116-208) P 62.3 3.8 0.00024 18.0 3.3 29 22-53 12-40 (93)
119 d2a61a1 a.4.5.28 (A:5-143) Tra 62.2 4.2 0.00027 17.6 3.5 24 26-51 40-63 (139)
120 d2ppxa1 a.35.1.3 (A:30-91) Unc 61.7 2.3 0.00015 19.7 2.1 26 31-56 11-36 (62)
121 d1utxa_ a.35.1.3 (A:) Putative 61.6 0.98 6.3E-05 22.5 0.2 29 31-59 13-41 (66)
122 d2r1jl1 a.35.1.2 (L:3-68) P22 61.3 0.97 6.2E-05 22.6 0.1 38 24-64 11-48 (66)
123 d1q06a_ a.6.1.3 (A:) Transcrip 60.1 2.5 0.00016 19.4 2.0 20 33-52 1-20 (127)
124 d2croa_ a.35.1.2 (A:) cro 434 60.1 2.1 0.00014 19.9 1.7 31 24-57 11-41 (65)
125 d1ub9a_ a.4.5.28 (A:) Hypothet 60.0 3.6 0.00023 18.1 2.9 38 12-55 16-53 (100)
126 d2cyya1 a.4.5.32 (A:5-64) Puta 59.7 4.3 0.00028 17.6 3.2 31 23-55 10-40 (60)
127 d1r71a_ a.4.14.1 (A:) Transcri 59.7 4.9 0.00031 17.1 3.5 31 20-54 22-52 (114)
128 d1r8ea1 a.6.1.3 (A:3-120) Tran 59.0 2.4 0.00015 19.6 1.8 21 33-53 4-24 (118)
129 d1g2ha_ a.4.1.12 (A:) Transcri 58.9 5.1 0.00033 17.0 5.2 35 11-52 19-53 (61)
130 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 57.6 5 0.00032 17.0 3.3 29 28-56 44-72 (80)
131 d1lmb3_ a.35.1.2 (3:) lambda C 57.5 2.3 0.00015 19.6 1.6 34 31-64 24-57 (87)
132 d1z6ra1 a.4.5.63 (A:12-81) Mlc 56.8 5.5 0.00035 16.7 4.0 32 20-53 9-40 (70)
133 d1lvaa3 a.4.5.35 (A:511-574) C 56.7 5.5 0.00035 16.7 4.4 37 13-49 4-40 (64)
134 d1x57a1 a.35.1.12 (A:8-85) End 55.0 3.5 0.00023 18.2 2.1 28 31-58 18-45 (78)
135 d2ofya1 a.35.1.3 (A:3-84) Puta 54.7 1.6 0.0001 20.8 0.4 36 17-56 14-49 (82)
136 d1aisb2 a.74.1.2 (B:1206-1300) 53.6 6.1 0.00039 16.4 3.3 14 35-48 63-76 (95)
137 d1ji8a_ d.203.1.1 (A:) DsrC, t 53.3 2 0.00013 20.1 0.6 45 12-57 50-94 (111)
138 d1umqa_ a.4.1.12 (A:) Photosyn 52.5 6.4 0.00041 16.2 5.9 24 26-52 30-53 (60)
139 d3broa1 a.4.5.28 (A:3-137) Tra 52.5 6.4 0.00041 16.2 3.7 29 23-51 36-64 (135)
140 d1v4ra1 a.4.5.6 (A:1-100) Tran 52.3 6.4 0.00041 16.2 4.7 51 1-54 1-55 (100)
141 d1ji8a_ d.203.1.1 (A:) DsrC, t 51.5 2.2 0.00014 19.8 0.6 45 12-57 50-94 (111)
142 d1d5ya2 a.4.1.8 (A:57-121) Rob 51.2 6.6 0.00043 16.1 3.1 38 18-58 3-41 (65)
143 d1vola2 a.74.1.2 (A:208-316) T 50.7 6.8 0.00043 16.0 3.6 38 15-53 44-82 (109)
144 d2fug21 c.47.1.21 (2:3-180) NA 50.6 4.2 0.00027 17.6 2.0 45 12-56 20-71 (178)
145 d2icta1 a.35.1.3 (A:8-94) Anti 49.2 2.3 0.00015 19.7 0.4 32 32-63 14-45 (87)
146 d2hr3a1 a.4.5.28 (A:2-146) Pro 49.1 7.1 0.00046 15.9 3.5 20 32-51 49-68 (145)
147 d1p4xa2 a.4.5.28 (A:126-250) S 48.7 7.2 0.00046 15.8 3.0 27 25-51 42-68 (125)
148 d2fxaa1 a.4.5.28 (A:6-167) Pro 48.1 7.4 0.00047 15.8 3.1 26 24-51 49-74 (162)
149 d1p4wa_ a.4.6.2 (A:) Transcrip 47.6 5.2 0.00033 16.9 2.0 24 31-54 36-59 (87)
150 d1nera_ a.35.1.2 (A:) Ner {Bac 47.6 5.8 0.00037 16.5 2.3 26 31-56 21-46 (74)
151 d2dt5a1 a.4.5.38 (A:4-77) Tran 46.5 7.8 0.0005 15.6 4.7 39 13-51 6-44 (74)
152 d1ig7a_ a.4.1.1 (A:) Msx-1 hom 46.2 5.6 0.00036 16.6 2.0 39 20-58 14-53 (58)
153 d3bwga1 a.4.5.6 (A:5-82) Trans 45.9 7.9 0.00051 15.5 3.9 36 17-52 3-42 (78)
154 d1l0oc_ a.4.13.2 (C:) SigmaF { 45.6 8 0.00051 15.5 5.0 38 11-49 11-48 (57)
155 d1le8a_ a.4.1.1 (A:) Mating ty 45.2 5.2 0.00033 16.9 1.7 40 15-57 9-49 (53)
156 d2gaua1 a.4.5.4 (A:152-232) Tr 43.9 8.4 0.00054 15.3 4.6 40 14-53 3-50 (81)
157 d1au7a1 a.4.1.1 (A:103-160) Pi 43.5 8.6 0.00055 15.2 2.6 41 15-58 11-52 (58)
158 d1uhsa_ a.4.1.1 (A:) Homeodoma 43.3 5.8 0.00037 16.6 1.7 39 20-58 15-55 (72)
159 d2hoea1 a.4.5.63 (A:10-71) N-a 43.3 8.6 0.00055 15.2 3.2 29 23-54 6-34 (62)
160 d1b72a_ a.4.1.1 (A:) Homeobox 43.2 6 0.00039 16.4 1.8 42 17-58 38-80 (88)
161 d1jgsa_ a.4.5.28 (A:) Multiple 43.1 8.7 0.00056 15.2 3.5 18 32-49 48-65 (138)
162 d2ecba1 a.4.1.1 (A:8-83) Zinc 42.6 8.8 0.00056 15.2 2.7 41 14-57 15-56 (76)
163 d1ku3a_ a.4.13.2 (A:) Sigma70 42.6 8.1 0.00052 15.4 2.4 36 12-50 11-46 (61)
164 d2fbia1 a.4.5.28 (A:5-140) Pro 42.4 8.9 0.00057 15.1 3.1 27 23-51 37-63 (136)
165 d3ctaa1 a.4.5.28 (A:5-89) Ta10 42.0 7.1 0.00046 15.9 2.0 23 31-53 20-42 (85)
166 d1rzsa_ a.35.1.2 (A:) cro p22 41.6 7.6 0.00049 15.6 2.1 19 34-52 12-30 (61)
167 d1bw5a_ a.4.1.1 (A:) Insulin g 40.3 9.1 0.00059 15.0 2.4 41 14-57 14-55 (66)
168 d1s7ea1 a.4.1.1 (A:103-152) He 39.8 3.1 0.0002 18.7 -0.1 48 2-56 1-49 (50)
169 d1rp3a1 a.4.13.1 (A:87-163) Si 37.9 10 0.00066 14.6 7.3 40 12-52 7-46 (77)
170 d1fjla_ a.4.1.1 (A:) Paired pr 37.3 9.7 0.00062 14.8 2.1 41 14-57 13-54 (65)
171 d1ocpa_ a.4.1.1 (A:) Oct-3 POU 37.1 7.5 0.00048 15.7 1.5 41 17-57 19-60 (67)
172 d2etha1 a.4.5.28 (A:1-140) Put 36.9 11 0.00068 14.5 3.3 19 32-50 46-64 (140)
173 d1z91a1 a.4.5.28 (A:8-144) Org 36.7 11 0.00069 14.5 2.7 20 32-51 47-66 (137)
174 d1zyba1 a.4.5.4 (A:148-220) Pr 36.7 8.9 0.00057 15.1 1.8 42 13-54 5-49 (73)
175 d2ieca1 d.316.1.1 (A:11-123) H 36.5 2.9 0.00019 18.9 -0.7 19 36-54 5-23 (113)
176 d1wi3a_ a.4.1.1 (A:) DNA-bindi 36.2 11 0.0007 14.4 2.7 41 15-57 19-60 (71)
177 d2cqxa1 a.4.1.1 (A:8-66) LAG1 35.7 7.5 0.00048 15.7 1.3 40 16-58 14-55 (59)
178 d1x2ma1 a.4.1.1 (A:8-59) Lag1 35.6 9.9 0.00063 14.8 1.9 40 16-58 6-47 (52)
179 d1jgga_ a.4.1.1 (A:) Even-skip 35.1 11 0.00071 14.4 2.1 41 14-57 10-51 (57)
180 d1ku2a1 a.4.13.1 (A:273-332) S 34.8 11 0.00073 14.3 4.5 34 12-46 9-42 (60)
181 d1hw1a1 a.4.5.6 (A:5-78) Fatty 34.5 12 0.00074 14.2 2.3 21 31-51 25-46 (74)
182 d2i52a1 d.316.1.1 (A:1-120) Hy 33.1 5.1 0.00033 17.0 0.1 21 34-54 13-33 (120)
183 d1hsja1 a.4.5.28 (A:373-487) S 33.0 12 0.00078 14.1 2.5 15 33-47 49-63 (115)
184 d2frha1 a.4.5.28 (A:102-216) P 32.6 12 0.00079 14.0 2.7 15 137-151 66-80 (115)
185 d2bv6a1 a.4.5.28 (A:5-140) Tra 32.6 12 0.00079 14.0 2.8 19 32-50 48-66 (136)
186 d2p7vb1 a.4.13.2 (B:546-613) S 32.3 12 0.00074 14.2 1.8 35 13-50 9-43 (68)
187 d2e1oa1 a.4.1.1 (A:8-64) Homeo 32.3 12 0.0008 14.0 2.0 40 15-57 12-52 (57)
188 d2hs5a1 a.4.5.6 (A:25-93) Puta 32.1 12 0.0008 14.0 4.7 39 13-51 3-44 (69)
189 d1ft9a1 a.4.5.4 (A:134-213) CO 31.9 13 0.00081 13.9 2.7 41 14-54 3-52 (80)
190 d1p4xa1 a.4.5.28 (A:1-125) Sta 31.1 13 0.00083 13.8 2.8 20 31-50 49-68 (125)
191 d2i52a1 d.316.1.1 (A:1-120) Hy 30.8 5.9 0.00038 16.5 0.1 28 36-63 15-49 (120)
192 d2craa1 a.4.1.1 (A:7-64) Homeo 30.3 13 0.00085 13.8 2.0 41 14-57 12-53 (58)
193 d1q4ra_ d.58.4.4 (A:) Hypothet 29.8 11 0.00073 14.3 1.4 67 8-74 13-83 (103)
194 d1b72a_ a.4.1.1 (A:) Homeobox 29.1 13 0.0008 14.0 1.6 41 18-58 39-80 (88)
195 d1lnwa_ a.4.5.28 (A:) MexR rep 28.4 14 0.00092 13.5 3.3 16 33-48 51-66 (141)
196 d1e3oc1 a.4.1.1 (C:104-160) Oc 28.2 14 0.00092 13.5 2.6 39 16-57 11-50 (57)
197 d2ecca1 a.4.1.1 (A:1-76) Homeo 27.7 15 0.00094 13.4 2.3 42 14-58 14-56 (76)
198 d1i5za1 a.4.5.4 (A:138-206) Ca 27.2 15 0.00096 13.4 3.5 40 15-54 4-51 (69)
199 d1bjxa_ c.47.1.2 (A:) Protein 26.9 11 0.00073 14.3 1.0 45 11-56 31-77 (110)
200 d1zq3p1 a.4.1.1 (P:2-68) Homeo 26.0 16 0.001 13.2 1.6 41 18-58 13-54 (67)
201 d1ufma_ a.4.5.47 (A:) COP9 sig 25.9 16 0.001 13.2 3.4 33 14-47 13-45 (84)
202 d1sfua_ a.4.5.19 (A:) 34L {Yab 25.9 16 0.001 13.2 1.8 35 17-51 8-43 (70)
203 d1rr7a_ a.4.1.14 (A:) Middle o 25.7 16 0.001 13.2 2.8 50 15-64 7-56 (94)
204 d1ttya_ a.4.13.2 (A:) Sigma70 25.3 16 0.001 13.1 2.4 26 24-49 30-55 (87)
205 d1yz8p1 a.4.1.1 (P:1-60) Pitui 25.0 16 0.001 13.1 1.6 41 14-57 12-53 (60)
206 d1tc3c_ a.4.1.2 (C:) Transposa 24.9 16 0.001 13.2 1.5 34 15-55 11-44 (51)
207 d1vnda_ a.4.1.1 (A:) VND/NK-2 24.1 17 0.0011 13.0 1.6 39 18-56 21-60 (77)
208 d1i3ja_ d.285.1.1 (A:) DNA-bin 23.3 17 0.0011 12.8 1.4 48 9-56 34-88 (96)
209 d1ftta_ a.4.1.1 (A:) Thyroid t 22.7 18 0.0011 12.8 2.3 37 21-57 17-54 (68)
210 d1a9xa2 c.24.1.1 (A:936-1073) 22.5 18 0.0012 12.7 1.7 61 1-62 4-69 (138)
211 d1xkya1 c.1.10.1 (A:1-292) Dih 22.0 18 0.0012 12.7 4.8 56 6-61 50-119 (292)
212 d1pufb_ a.4.1.1 (B:) pbx1 {Hum 21.9 18 0.0012 12.7 2.7 43 15-57 13-56 (73)
213 d2ebna_ c.1.8.5 (A:) Endo-beta 21.8 19 0.0012 12.6 2.0 31 6-36 96-126 (285)
214 d1p7ia_ a.4.1.1 (A:) Engrailed 21.2 19 0.0012 12.6 2.1 37 21-57 14-51 (53)
215 d1x2na1 a.4.1.1 (A:6-67) Homeo 21.1 19 0.0012 12.5 3.1 50 7-57 7-57 (62)
216 d1xr4a1 c.124.1.2 (A:1-236) Pu 20.4 20 0.0013 12.4 2.0 37 33-69 44-83 (236)
217 d1a8ya2 c.47.1.3 (A:127-228) C 20.3 20 0.0013 12.4 2.9 44 11-54 31-74 (102)
218 d1rfza_ a.195.1.1 (A:) YutG ho 20.0 20 0.0013 12.4 1.6 30 10-42 5-34 (164)
No 1
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=99.48 E-value=9.1e-14 Score=123.38 Aligned_cols=73 Identities=19% Similarity=0.318 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8788899999999999987491035479999984778545540268888999999999999999999875215
Q T0575 9 LPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTPPA 81 (216)
Q Consensus 9 ~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~~~ 81 (216)
.|+++|++|+++|.++|.++||+++||++||+++|||+++||+||+||++|+.+++.+..+...+.+......
T Consensus 3 d~~~~r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~lY~~F~~K~~L~~~~~~~~~~~~~~~~~~~~~~ 75 (77)
T d2gfna1 3 DHDERRRALADAVLALIAREGISAVTTRAVAEESGWSTGVLNHYFGSRHELLLAALRRAGDIQGDRYRTILDE 75 (77)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHSSCHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9899999999999999998590405799999987888779988883999999999999999999999999838
No 2
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.46 E-value=1.2e-13 Score=122.45 Aligned_cols=69 Identities=17% Similarity=0.323 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 788899999999999987491035479999984778545540268888999999999999999999875
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQT 78 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~ 78 (216)
++++|++|+++|.++|.++||+++|+++||++||||+++||+||+||++|+.+++++..+.+.+.+...
T Consensus 5 ~~~~r~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~t~Y~~F~~Ke~L~~~~~~~~~~~~~~~l~~~ 73 (76)
T d2fd5a1 5 KTQTRARILGAATQALLERGAVEPSVGEVMGAAGLTVGGFYAHFQSKDALMLEAFEQLLGKRRELLGEL 73 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHTTCCGGGGGGTCSCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 899999999999999998491305699999983899550042089999999999999999999998767
No 3
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.46 E-value=2.2e-13 Score=120.39 Aligned_cols=69 Identities=19% Similarity=0.406 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 888999999999999874910354799999847785455402688889999999999999999998752
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTP 79 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~ 79 (216)
++||++|+++|.++|.++||+++||++||+++|||+|+||+||+||++|+.+++....+.+...+....
T Consensus 2 ~~~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~Y~~F~~K~~L~~~~~~~~~~~~~~~~~~~~ 70 (73)
T d1t56a1 2 DDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLA 70 (73)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 799999999999999975915077999999869888899888849999999999999999999999987
No 4
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=99.45 E-value=2e-13 Score=120.78 Aligned_cols=70 Identities=16% Similarity=0.280 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7888999999999999874910354799999847785455402688889999999999999999998752
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTP 79 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~ 79 (216)
.+++|++|+++|.++|.++||+++|+++||+++|||+++||+||+||++|+.++++...+.+...+.+..
T Consensus 2 r~~~r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~t~Y~~F~~K~~L~~~~~~~~~~~~~~~l~~~~ 71 (74)
T d1v7ba1 2 RTSKKEMILRTAIDYIGEYSLETLSYDSLAEATGLSKSGLIYHFPSRHALLLGMHELLADDWDKELRDIT 71 (74)
T ss_dssp CSCHHHHHHHHHHHHHHHSCSTTCCHHHHHHHHCSCHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6899999999999999985956357999998849692238550799999999999999999999998874
No 5
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.44 E-value=2.3e-13 Score=120.24 Aligned_cols=69 Identities=20% Similarity=0.273 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 788899999999999987491035479999984778545540268888999999999999999999875
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQT 78 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~ 78 (216)
|+++|++|+++|.++|.++||+++||++||+++|+|+++||+||+||++|+.+++....+.+...+...
T Consensus 2 p~~~r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~iY~~F~sK~~L~~~~~~~~~~~~~~~~~~i 70 (74)
T d2g7sa1 2 PQSKADDILQCARTLIIRGGYNSFSYADISQVVGIRNASIHHHFPSKSDLVCKLVSQYRQEAEAGIAEL 70 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHCCCHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 788999999999999998591506799999987818416988883999999999999999999999998
No 6
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=99.44 E-value=2.6e-13 Score=119.80 Aligned_cols=70 Identities=19% Similarity=0.299 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7888999999999999874910354799999847785455402688889999999999999999998752
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTP 79 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~ 79 (216)
++++|++|+++|.++|.++||+++||++||+++|||+|+||+||+||++|+.++++...+.+.+......
T Consensus 5 a~~~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~y~~F~sKe~L~~~~~~~~~~~~~~~~~~~~ 74 (78)
T d2o7ta1 5 ALKRREHIITTTCNLYRTHHHDSLTMENIAEQAGVGVATLYRNFPDRFTLDMACAQYLFNVVISLQLQAI 74 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999999999984914067999998839988799998869999999999999999999999987
No 7
>d1t33a1 a.4.1.9 (A:1-88) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=99.43 E-value=1.7e-13 Score=121.29 Aligned_cols=76 Identities=25% Similarity=0.284 Sum_probs=65.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98886678878889999999999998749103547999998477854554026888899999999999999999987
Q T0575 1 MPTETFFNLPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQ 77 (216)
Q Consensus 1 Mp~~~~~~~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~ 77 (216)
|+..+....++++|++|++||.++|.++||++ |+++||++||||+|+||+||+||++|+.+++.+..+.+.+.+..
T Consensus 1 M~~p~~~~r~~~tr~~Il~aa~~l~~~~G~~~-t~~~Ia~~agvs~~~~Y~~F~sK~~L~~a~~~~~~~~~~~~~~~ 76 (88)
T d1t33a1 1 MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHA-TTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRP 76 (88)
T ss_dssp CCSCCCSHHHHHHHHHHHHHHHHHHHHHGGGS-CHHHHHHHHTSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 95899865099999999999999998754016-79999988399844310019899999999999999999999987
No 8
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.42 E-value=2.7e-13 Score=119.72 Aligned_cols=72 Identities=21% Similarity=0.234 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 888999999999999874910354799999847785455402688889999999999999999998752155
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTPPAS 82 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~~~~ 82 (216)
.++|++|+++|.++|.++||+++||++||+++|||+++||+||+||++|+.+++....+.+...+.......
T Consensus 3 ~~tre~Il~aa~~~~~~~G~~~~ti~~Ia~~agvs~~s~y~~F~~K~~l~~~~~~~~~~~~~~~~~~~~~~~ 74 (79)
T d2fbqa1 3 SETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHFGSKKALIQAVFSRFLGPFCASLEKELDRR 74 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 489999999999999986935040999999988285578787769999999779999999999999997537
No 9
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.41 E-value=4.2e-13 Score=118.26 Aligned_cols=65 Identities=26% Similarity=0.500 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78889999999999998749103547999998477854554026888899999999999999999
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAF 74 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~ 74 (216)
++++|++|+++|.++|.++||+++||++||++||||+|++|+||+||++|+.++++...+.....
T Consensus 3 ~~~~r~~il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~~y~~F~sK~~L~~~~~~~~~~~~~~~ 67 (71)
T d1ui5a1 3 AEQTRATIIGAAADLFDRRGYESTTLSEIVAHAGVTKGALYFHFAAKEDLAHAILEIQSRTSRRL 67 (71)
T ss_dssp TTTHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999859462679999998794876999898299999999999999999999
No 10
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=99.41 E-value=7.8e-13 Score=116.19 Aligned_cols=70 Identities=14% Similarity=0.508 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7888999999999999874910354799999847785455402688889999999999999999998752
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTP 79 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~ 79 (216)
.+++|++|+++|.++|.++||+++||++||+++|||+++||+||+||++|+.++++...+.+...+....
T Consensus 9 ~~~~r~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~Y~~F~~K~~L~~~~~~~~~~~~~~~l~~~~ 78 (81)
T d1rkta1 9 KDKRQAEILEAAKTVFKRKGFELTTMKDVVEESGFSRGGVYLYFSSTEEMFRRIIETGLDEGLRKLDKSA 78 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999985925177999999869498899888849999999999999999999999987
No 11
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.41 E-value=7.8e-13 Score=116.18 Aligned_cols=71 Identities=21% Similarity=0.388 Sum_probs=65.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 78889999999999998749103547999998477854554026888899999999999999999987521
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTPP 80 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~~ 80 (216)
.+++|++|+++|.++|.++||+++||++||+++|||+++||+||+||++|+.+++....+.+.+.+.....
T Consensus 7 ~~~~r~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~Y~~F~~k~~L~~~~~~~~~~~~~~~~~~a~~ 77 (79)
T d2oi8a1 7 RTQVRAEIKDHAWEQIATAGASALSLNAIAKRMGMSGPALYRYFDGRDELITELIRDAYRSQADSLRAAAA 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSCCHHHHHHHTTCCHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999999999999869030679999998679977445516999999999999999999999999885
No 12
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.40 E-value=3.6e-13 Score=118.76 Aligned_cols=70 Identities=23% Similarity=0.419 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7888999999999999874910354799999847785455402688889999999999999999998752
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTP 79 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~ 79 (216)
++++|++|+++|.++|.++||+++|+++||+++|||+|+||+||+||++|+.++++...+.+...+...+
T Consensus 3 ~e~tr~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~y~~F~~k~~L~~~~~~~~~~~~~~~~~~~l 72 (75)
T d3c07a1 3 SEQTRALILETAMRLFQERGYDRTTMRAIAQEAGVSVGNAYYYFAGKEHLIQGFYDRIAAEHRAAVREVL 72 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSTTCCHHHHHHHHTSCHHHHHHHCSSHHHHHHHHHHHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6999999999999999974914077999999879398799989859999999999999999999999987
No 13
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=99.39 E-value=9.9e-13 Score=115.36 Aligned_cols=68 Identities=26% Similarity=0.503 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89999999999998749103547999998477854554026888899999999999999999987521
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTPP 80 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~~ 80 (216)
||++|+++|.++|.++||+++||++||+++|||+|+||+||+||++|+.+++....+.+.+.+.....
T Consensus 2 r~~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~~y~~F~~K~~L~~~~~~~~~~~~~~~~~~~~~ 69 (72)
T d1vi0a1 2 KYMQIIDAAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFKNKEDILISLFKEKMGQFIERMEEDIK 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTSCHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999859041559999998794987998888399999999999999999999999988
No 14
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=99.38 E-value=8e-13 Score=116.10 Aligned_cols=67 Identities=24% Similarity=0.453 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8889999999999998749103547999998477854554026888899999999999999999987
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQ 77 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~ 77 (216)
.+||++|+++|.++|.++||+++||++||+++|||+++||+||+||++|+.+++....+.+.+.++.
T Consensus 3 ~~rr~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~y~~F~~K~~l~~~~~~~~~~~~~~~l~a 69 (72)
T d1pb6a1 3 SAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKA 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHTTSCHHHHHHHSSSHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7899999999999999859250679999998697867999888699999999999999999999988
No 15
>d2hkua1 a.4.1.9 (A:18-87) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=99.37 E-value=9e-13 Score=115.67 Aligned_cols=66 Identities=15% Similarity=0.241 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8899999999999987491035479999984778545540268888999999999999999999875
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQT 78 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~ 78 (216)
|+|++||++|.++|.++|| ++|+++||+++|||+|+||+||+||++|+.+++.+...+....+...
T Consensus 1 ~tr~~Il~aA~~l~~~~G~-~~t~~~Ia~~agvs~~~~Y~~F~~K~~L~~~~~~~~~~~~~~~~~~~ 66 (70)
T d2hkua1 1 QTRDALFTAATELFLEHGE-GVPITQICAAAGAHPNQVTYYYGSKERLFVEVACAAVLRAGKRAEDD 66 (70)
T ss_dssp CHHHHHHHHHHHHHHHHCT-TSCHHHHHHHHTCCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9699999999999876135-74499999887888536873089999999999999999999999997
No 16
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.37 E-value=8.8e-13 Score=115.75 Aligned_cols=67 Identities=27% Similarity=0.430 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999999999874910354799999847785455402688889999999999999999998752
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTP 79 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~ 79 (216)
||++|+++|.++|.++||+++||++||+++|||+|+||+||+||++|+.+++....+.+...+....
T Consensus 1 rR~~il~aa~~l~~~~G~~~~si~~Ia~~agvs~~t~Y~~F~sK~~L~~~~~~~~~~~~~~~l~~~~ 67 (70)
T d2gena1 1 RKDEILQAALACFSEHGVDATTIEMIRDRSGASIGSLYHHFGNKERIHGELYLAGIGQYAALLEAGF 67 (70)
T ss_dssp CHHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCCHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999985924087999999879587799989879999999999999999999999987
No 17
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=99.37 E-value=1.1e-12 Score=114.97 Aligned_cols=69 Identities=17% Similarity=0.380 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 88999999999999874910354799999847785455402688-8899999999999999999987521
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFAD-KKDCYLYLIQLGIEQKTAFLRQTPP 80 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s-Ke~L~~~~~~~~~~~~~~~~~~~~~ 80 (216)
++|++|+++|.++|.++||+++||++||++||||+++||+||+| |++|+.++++...+.+...+....+
T Consensus 2 etr~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~iy~~F~~~Ke~L~~~~~~~~~~~~~~~~~~~~~ 71 (73)
T d1sgma1 2 DSREKILHTASRLSQLQGYHATGLNQIVKESGAPKGSLYHFFPNGKEELAIEAVTYTGKIVEHLIQQSMD 71 (73)
T ss_dssp CHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCCSCHHHHSTTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 2999999999999998492417799999986888779999859989999999999999999999999782
No 18
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.36 E-value=1.8e-12 Score=113.34 Aligned_cols=67 Identities=13% Similarity=0.216 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7888999999999999874910354799999847785455402688889999999999999999998
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLR 76 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~ 76 (216)
.+++|++|+++|.++|.++||+++|+++||+++|||+|+||+||+||++|+.+++++..+.+.+.+.
T Consensus 3 ~~~tr~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~Y~~F~~K~~L~~~~~~~~~~~~~~~v~ 69 (75)
T d2hyja1 3 AQATRGRILGRAAEIASEEGLDGITIGRLAEELEMSKSGVHKHFGTKETLQISTLDKAFVDFWHRVV 69 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7999999999999999975903076999999889098999888829999999999999999999988
No 19
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=99.35 E-value=2.3e-12 Score=112.58 Aligned_cols=67 Identities=15% Similarity=0.239 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999999999874910354799999847785455402688889999999999999999998752
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTP 79 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~ 79 (216)
+|++|+++|.++|.++||+++|+++||+++|||+++||+||+||++|+.+++.+..+.+.+.+.+..
T Consensus 4 t~e~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~slY~yF~~k~~L~~~~~~~~~~~~~~~l~~a~ 70 (72)
T d1zk8a1 4 TLQKIVETAAEIADANGVQEVTLASLAQTLGVRSPSLYNHVKGLQDVRKNLGIYGIKKLHNRLEEAA 70 (72)
T ss_dssp CHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTSCHHHHTTTCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 3999999999999986977566999999959799999898839999999999999999999999884
No 20
>d2d6ya1 a.4.1.9 (A:7-74) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.35 E-value=8.1e-13 Score=116.04 Aligned_cols=63 Identities=21% Similarity=0.432 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 888999999999999874910354799999847785455402688889999999999999999
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTA 73 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~ 73 (216)
|.+|++|+++|.++|.++||+++||++||+++|+|+|+||+||+||++|+.+++++....+..
T Consensus 1 E~tr~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~~Y~~F~~K~~l~~~~~~~~~~~~~~ 63 (68)
T d2d6ya1 1 EATKARIFEAAVAEFARHGIAGARIDRIAAEARANKQLIYAYYGNKGELFASVLEKKMLDLAI 63 (68)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHTCCHHHHHHHHSSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 989999999999999985925067999998878466289888749999999999999999986
No 21
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=99.35 E-value=1.8e-12 Score=113.42 Aligned_cols=65 Identities=17% Similarity=0.390 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999998749103547999998477854554026888899999999999999999987
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQ 77 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~ 77 (216)
+|++|+++|.++|.++||+++|+++||+++|||+++||+||+||++|+.+++....+.+.+.+..
T Consensus 2 ~r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~~y~~F~~K~~L~~~~~~~~~~~~~~~~~~ 66 (71)
T d1jt6a1 2 LKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKK 66 (71)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCCHHHHHHHTTCCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999859140679999998785875998888499999999999999999999999
No 22
>d2g3ba1 a.4.1.9 (A:2-73) Putative transcriptional regulator {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=99.34 E-value=9.3e-13 Score=115.58 Aligned_cols=66 Identities=20% Similarity=0.333 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 888999999999999874910354799999847785455402688889999999999999999998
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLR 76 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~ 76 (216)
.|||++|+++|.++|.++||+++|+++||+++|||+++||+||+||++|+.+++++..+.+.....
T Consensus 1 aerr~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~ly~~F~~K~~L~~~~~~~~~~~~~~~~~ 66 (72)
T d2g3ba1 1 SERRDAILKASATAIAQRGIRGLRVNDVAEVAGVSPGLLYYHFKDRIGLLEAALNYINDRARAYRS 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHTSCHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 989999999999999983924077999998859697799988839999999999999999999988
No 23
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=99.34 E-value=2.5e-12 Score=112.27 Aligned_cols=65 Identities=22% Similarity=0.423 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999998749103547999998477854554026888899999999999999999987
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQ 77 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~ 77 (216)
+|++|+++|.++|.++||+++||++||+++|||+++||+||+||++|+.++++...+.+...+.+
T Consensus 2 t~e~i~~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~iy~~F~sK~~L~~~~~~~~~~~~~~~~~~ 66 (69)
T d2np5a1 2 SPERLAAALFDVAAESGLEGASVREVAKRAGVSIGAVQHHFSTKDEMFAFALRTLVDKLLARLSE 66 (69)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 49999999999999849140679999988398887998888399999999999999999999987
No 24
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=99.33 E-value=1e-12 Score=115.34 Aligned_cols=69 Identities=25% Similarity=0.465 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 889999999999998749103547999998477854554026888899999999999999999987521
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTPP 80 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~~ 80 (216)
+||++|+++|.++|.++||+++|+++||+++|||+++||+||+||++|+.+++....+.+...+.....
T Consensus 3 ~rR~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~iY~~F~~k~~Ll~~~~~~~~~~~~~~~~~~l~ 71 (75)
T d2id6a1 3 SKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKNKEELYYQAYMSVTEKLQKEFENFLM 71 (75)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHTCCTHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999839351679999988499888998888799999999999999999999999997
No 25
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=99.33 E-value=4.2e-12 Score=110.51 Aligned_cols=62 Identities=18% Similarity=0.406 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 78889999999999998749103547999998477854554026888899999999999999
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQK 71 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~ 71 (216)
+..+|++|++||.++|.++||+++||++||+++|||+++||+||+||++|+.+++++...++
T Consensus 4 ~~~t~~~I~~aa~~l~~~~G~~~~sv~~Ia~~agvs~~t~Y~~F~~k~~l~~~~~~~~~~~~ 65 (71)
T d2iu5a1 4 SIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFENDFAEL 65 (71)
T ss_dssp TSHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHTSCGGGGGGTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 19999999999999999849640779999987571645897776799999999999999999
No 26
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=99.32 E-value=5.7e-13 Score=117.25 Aligned_cols=66 Identities=21% Similarity=0.343 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999874910354799999847785455402688889999999999999999998752
Q T0575 14 RSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQTP 79 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~~~ 79 (216)
|++||++|.++|.++||+++||++||+++|||+|+||+||+||++|+.++++++.+.....+.+..
T Consensus 2 re~iL~aA~~lf~~~G~~~~ti~~Ia~~agvs~~~~Y~~F~~K~~L~~~~~~~~~~~~~~~~~~al 67 (69)
T d2i10a1 2 DQVALQTAMELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFEKTLDRYMCERTLQLEEAM 67 (69)
T ss_dssp CHHHHHHHHHHHHHHTTTTCCHHHHHHHHTCCHHHHHHHHCSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999987906277999999868786299888859999999999999999999999987
No 27
>d2fx0a1 a.4.1.9 (A:4-76) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=99.32 E-value=1.9e-12 Score=113.23 Aligned_cols=58 Identities=19% Similarity=0.349 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 7888999999999999874910354799999847785455402688889999999999
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLG 67 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~ 67 (216)
.+++|++|+++|.++|.++||+++||++||++||||+++||+||+||++|+.+++++.
T Consensus 2 re~tr~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~~Y~~F~~K~~L~~~~~~~~ 59 (73)
T d2fx0a1 2 REQTMENILKAAKKKFGERGYEGTSIQEIAKEAKVNVAMASYYFNGKENLYYEVFKKY 59 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTSCHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 2889999999999999986935176999999878486499988849999999999997
No 28
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.28 E-value=4.5e-12 Score=110.28 Aligned_cols=62 Identities=21% Similarity=0.318 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 78889999999999998749103547999998477854554026888899999999999999
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQK 71 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~ 71 (216)
+.++|++|+++|.++|.++||+++|+++||+++|+|+++||+||+||++|+.++++...++.
T Consensus 4 ~~~~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~iY~~F~~k~~L~~~~~~~~~~~~ 65 (68)
T d2id3a1 4 TARIREAVLLAAGDALAADGFDALDLGEIARRAGVGKTTVYRRWGTPGGLAADLLADMAEQS 65 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHHHHCSHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 39999999999999999849340779999999786887999998599999999999999975
No 29
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=99.27 E-value=6.2e-12 Score=109.21 Aligned_cols=61 Identities=15% Similarity=0.363 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7888999999999999874910354799999847785455402688889999999999999
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQ 70 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~ 70 (216)
+.++|++|+++|.++|.++||+++||++||+++|+|+++||+||+||++|+.+++....++
T Consensus 2 ~~~~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~y~~F~~k~~L~~~~~~~~~~~ 62 (69)
T d2fq4a1 2 NIETQKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVVMDGFLSAAAA 62 (69)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 6999999999999999983924077999999978588799999879999999999999883
No 30
>d1z0xa1 a.4.1.9 (A:4-71) Transcriptional regulator EF0787 {Enterococcus faecalis [TaxId: 1351]}
Probab=99.26 E-value=5.2e-12 Score=109.81 Aligned_cols=59 Identities=14% Similarity=0.317 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 899999999999987-49103547999998477854554026888899999999999999
Q T0575 13 KRSRLIDVLLDEFAQ-NDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQK 71 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~-~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~ 71 (216)
+|++|+++|.++|.+ +||+++||++||+++|||+++||+||+||++|+.+++++..+++
T Consensus 3 tr~~Ii~aa~~l~~e~~G~~~~t~~~Ia~~agvs~~~iy~hF~~K~~L~~~~~~~~~~~~ 62 (68)
T d1z0xa1 3 SKDTIIAAAFSLLEKSPTLEQLSMRKVAKQLGVQAPAIYWYFKNKQALLQSMAEAIEEHF 62 (68)
T ss_dssp SHHHHHHHHHHHHHHSCCGGGCCHHHHHHHHTSCHHHHHTTCSSHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHC
T ss_conf 899999999999987679231679999998772656899962999999999999999654
No 31
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.22 E-value=3.5e-12 Score=111.16 Aligned_cols=61 Identities=15% Similarity=0.324 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7888999999999999874910354799999847785455402688889999999999999
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQ 70 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~ 70 (216)
|..+|++|+++|.++|.++||+++|+++||+++|+|+++||+||+||++|+.+++++...+
T Consensus 2 p~~tr~~Il~aa~~l~~~~g~~~~si~~ia~~~gvs~~~~y~hF~~K~~L~~~~~~~~~~~ 62 (68)
T d2g7la1 2 PALSRRWIVDTAVALMRAEGLEKVTMRRLAQELDTGPASLYVYVANTAELHAAVLDALLGE 62 (68)
T ss_dssp CCCCHHHHHHHHHHHHHHHCSSSCCHHHHHHHTTSCHHHHTTTCCSHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 8035999999999999984903078999999978287676287759999999999999977
No 32
>d2vkva1 a.4.1.9 (A:6-67) Tetracyclin repressor (Tet-repressor, TetR) {Escherichia coli [TaxId: 562]}
Probab=99.21 E-value=8.6e-12 Score=108.10 Aligned_cols=58 Identities=12% Similarity=0.238 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998749103547999998477854554026888899999999999999
Q T0575 14 RSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQK 71 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~ 71 (216)
|++|+++|.++|.++|++++|+++||+++|||+|+||+||+||++|+.++++...+++
T Consensus 1 R~~Il~aA~~l~~~~G~~~~s~~~Ia~~agvs~~tiy~~F~~K~~L~~~~~~~~~~~~ 58 (62)
T d2vkva1 1 KSKVINSALELGNEVGIEGLTTRKLAQKLGVEQPTLYWHVKNKRALLDALAVEILARH 58 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCHHHHHHHHTSCHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 9998999999999839351789999988098888999888799999999999999998
No 33
>d2g7ga1 a.4.1.9 (A:9-73) Putative transcriptional regulator Rha04620 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=99.14 E-value=1.9e-11 Score=105.47 Aligned_cols=57 Identities=9% Similarity=0.188 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 89999999999998749103547999998477854554026888899999999999999
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQK 71 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~ 71 (216)
+|++|+++|.++|.++| ++||++||+++|||+|+||+||+||++|+.+++++....+
T Consensus 2 ~R~~Il~aa~~l~~~~G--~~ti~~Ia~~agvs~~~iY~~F~~K~~L~~~v~~~~~~~~ 58 (65)
T d2g7ga1 2 DRERIAEAALELVDRDG--DFRMPDLARHLNVQVSSIYHHAKGRAAVVELVRHRVVREI 58 (65)
T ss_dssp CHHHHHHHHHHHHHHHS--SCCHHHHHHHTTSCHHHHHTTSCHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHCC--CCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 89999999999997867--9789999988570613131158999999999999999998
No 34
>d2np3a1 a.4.1.9 (A:35-99) Putative transcriptional regulator SCO0857 {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.10 E-value=1.5e-11 Score=106.30 Aligned_cols=60 Identities=20% Similarity=0.397 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999998749103547999998477854554026888899999999999999999987
Q T0575 17 LIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIEQKTAFLRQ 77 (216)
Q Consensus 17 Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~~~~~~~~~ 77 (216)
|+++|.++|.++||+++||++||+++|||+++||+||+||++|+.++++... ++.+.+..
T Consensus 1 Il~aA~~l~~~~G~~~~s~~~IA~~agvs~~~ly~~F~sK~~L~~a~~~~~~-~~~e~~~~ 60 (65)
T d2np3a1 1 ILTAARVCFAERGFDATSLRRIAETAGVDQSLVHHFYGTKENLFLQALELPG-KIEEAITA 60 (65)
T ss_dssp CHHHHHHHC---------------------------CCC-CHHHHHHHCHHH-HHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHH-HHHHHHHH
T ss_conf 9999999999879040779999998786887999888799999999999874-09999998
No 35
>d1vi0a2 a.121.1.1 (A:78-194) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=98.68 E-value=5.1e-07 Score=71.19 Aligned_cols=117 Identities=14% Similarity=0.166 Sum_probs=97.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 46899999999999998708089999999986164048999999999999999999999986488999999889999999
Q T0575 85 DMFAYLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLN 164 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~ 164 (216)
++.+++..++..++.+..++|.+..+++.+.....+.....+......+...+.+++.+|++.|++++++|+..++..+.
T Consensus 1 sa~e~L~~~i~~~~~~~~~~~~~~~i~~~E~~~~~~~~~~~i~~~~~~~~~~~~~ii~~g~~~G~ir~d~d~~~~a~~i~ 80 (117)
T d1vi0a2 1 TAKEKLALVISKHFSLLAGDHNLAIVTQLELRQSNLELRQKINEILKGYLNILDGILTEGIQSGEIKEGLDVRLARQMIF 80 (117)
T ss_dssp SHHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 98999999999999999839656776999885379999999999999999999999999998488656899899999999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999963389907789999999889999999999999999700169
Q T0575 165 VVFTELGNHLIERFAVNPAELLREGGIVLLQPAMRRVIEQVIDILERGMRRR 216 (216)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~Gl~~r 216 (216)
+++.+....|.......+ +....+.+++++.+||+.|
T Consensus 81 g~i~~~~~~w~~~~~~~~---------------~~~~~~~~~~~~~~Gl~~r 117 (117)
T d1vi0a2 81 GTIDETVTTWVMNDQKYD---------------LVALSNSVLELLVSGIHNK 117 (117)
T ss_dssp HHHHHHHHHHHHTTTCSC---------------GGGGHHHHHHHHHHCSBCC
T ss_pred HHHHHHHHHHHHCCCCCC---------------HHHHHHHHHHHHHHHHCCC
T ss_conf 999999999881489999---------------9999999999999976379
No 36
>d1pb6a2 a.121.1.1 (A:86-211) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=98.47 E-value=2.7e-06 Score=65.57 Aligned_cols=122 Identities=13% Similarity=0.184 Sum_probs=97.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 64689999999999999870808999999998616404899999999999999999999998648899999988999999
Q T0575 84 TDMFAYLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVL 163 (216)
Q Consensus 84 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~ 163 (216)
.+|.+.++.++..++++..+||...+++..+.....+.....+..........+.++++.+++.|.+++ +|+..+...+
T Consensus 2 ~~P~ealr~~i~~~~~~~~~~P~~~rl~~~E~~~~~~~l~~~~~~~~~~~~~~~~~il~~g~~~G~~r~-vdp~~l~~~I 80 (126)
T d1pb6a2 2 FAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAP-IDPQHLIFMI 80 (126)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTTCTTTHHHHHTHHHHHHHHHHHHHHHHHHTTSSCS-CCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHH
T ss_conf 888999999999999999989338799998874599316899999999999999999999997798654-7799999999
Q ss_pred HHHHHHHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999999999999---63389907789999999889999999999999999700169
Q T0575 164 NVVFTELGNHLI---ERFAVNPAELLREGGIVLLQPAMRRVIEQVIDILERGMRRR 216 (216)
Q Consensus 164 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~Gl~~r 216 (216)
+++.......-. ....... .....+++..+.+.+++.+|+++|
T Consensus 81 ~~~~~~y~~~~~~~~~l~g~~~----------~~~~~~e~~~~~v~~lvL~gl~pr 126 (126)
T d1pb6a2 81 WASTQHYADFAPQVEAVTGATL----------RDEVFFNQTVENVQRIIIEGIRPR 126 (126)
T ss_dssp HHHHHHHHHTHHHHHHHHSCCT----------TSHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCC----------CCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999818999998749986----------898999999999999999635789
No 37
>d2gena2 a.121.1.1 (A:76-193) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=98.10 E-value=0.00013 Score=52.51 Aligned_cols=100 Identities=15% Similarity=0.082 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 468999999999999987080899999999-8616404899999999999999999999998648899999988999999
Q T0575 85 DMFAYLRWLLDVGIQFQFHNPRLAQIAYKA-LYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVL 163 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~ 163 (216)
++.++++.++..++++..+||...++++.. .....+.....+..........+.+++.++++.|.+++ .|+...+..+
T Consensus 2 s~~e~lr~~v~~~~~~v~~~p~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~g~~~G~~r~-~~~~~~~~~i 80 (118)
T d2gena2 2 SAEETVRLLVTSYIDWVVANPDWARFILHSRGRVEAGELGERLRADNQAHFARIHAALAGYRAEGLFRE-MPDDCFASVV 80 (118)
T ss_dssp SHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCBCC-CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHH
T ss_conf 999999999999999999095998999997600237307899999999999999999999988578886-6799999999
Q ss_pred HHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 9999999999996338990778
Q T0575 164 NVVFTELGNHLIERFAVNPAEL 185 (216)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~ 185 (216)
.+.+..+..+|.......+.+.
T Consensus 81 ~G~~~~~~~~wl~~~~~~~~e~ 102 (118)
T d2gena2 81 IGPAHDLARQWLAGRTRVALAD 102 (118)
T ss_dssp HHHHHHHHHHHHTTCCSSCGGG
T ss_pred HHHHHHHHHHHHCCCCCCCHHH
T ss_conf 9999999999982799999999
No 38
>d2id6a2 a.121.1.1 (A:76-200) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=97.97 E-value=0.0012 Score=44.96 Aligned_cols=124 Identities=17% Similarity=0.281 Sum_probs=98.2
Q ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 46899999999999998708089999999986164048999999999999999999999986488999999889999999
Q T0575 85 DMFAYLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLN 164 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~ 164 (216)
+..+++..+...-+.....||....++ ....+.++.....+..............+..+++...+++++|++.+...+.
T Consensus 2 DfFe~i~~~~~~K~~~~~~~P~~~~Fl-~~~~~~~~~vk~ei~~~~~~~~~~~~~~~~~~id~~klRe~id~e~~~~~l~ 80 (125)
T d2id6a2 2 DIFDFMERWIEKKLEYSASHPEEADFL-ITLVSVDEGLRKRILLDLEKSQRVFFDFVREKLKDLDLAEDVTEEIALKFLM 80 (125)
T ss_dssp CHHHHHHHHHHHHHHHHHHCHHHHHHH-GGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHH
T ss_conf 789999999999999999891899999-9986698878899999999999999999998641976749999999999999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999996338990778999999988999999999999999970016
Q T0575 165 VVFTELGNHLIERFAVNPAELLREGGIVLLQPAMRRVIEQVIDILERGMRR 215 (216)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~Gl~~ 215 (216)
.++.++...+.......|.....+ -..+..-++..+++|.+|+.+
T Consensus 81 ~~~~g~~~ky~~~~~~~~~~~~~d------~~~l~~e~~~~ldilk~gi~k 125 (125)
T d2id6a2 81 WFFSGFEEVYLRTYQGKPELLKRD------MNTLVEEVKVMLRILKKGMTK 125 (125)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHH------HHHHHHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHH------HHHHHHHHHHHHHHHHHCCCC
T ss_conf 999999999999986480268865------999999999999999860669
No 39
>d2hyja2 a.121.1.1 (A:83-200) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=97.80 E-value=0.0022 Score=43.09 Aligned_cols=100 Identities=11% Similarity=0.054 Sum_probs=80.1
Q ss_pred CHHHHHHHHHHHHHHHHHHCH----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 468999999999999987080----8999999998616404899999999999999999999998648899999988999
Q T0575 85 DMFAYLRWLLDVGIQFQFHNP----RLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAA 160 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~ 160 (216)
++.++++.+++.+..+...+. ++......+.....+...+.+......+...+.+.+.++++.|+++++.|++.++
T Consensus 2 ~~~~rL~a~~~~~~~~~~~~~~~~GC~~~~~~~E~~~~~~~ir~~l~~~~~~~~~~l~~~l~~a~~~G~i~~~~d~~~lA 81 (118)
T d2hyja2 2 PGLRRLRAVCANSVGYLEEPLLPGGCLLTAALSEYDGRPGRVRDAVAEVWSRWREQLRADLTAAVDKGELPAGFDVEQAL 81 (118)
T ss_dssp TTHHHHHHHHHHHHHHHHSCSSTTSCHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCTTCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 88999999999999987179999998567689771779989999999999999999999999999869878889999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 999999999999999633899077
Q T0575 161 FVLNVVFTELGNHLIERFAVNPAE 184 (216)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~ 184 (216)
..+.+++.|+...........+..
T Consensus 82 ~~l~~~~~G~~~~~r~~~d~~~l~ 105 (118)
T d2hyja2 82 FEIVAAGLALNAAMQLQHDRTAAD 105 (118)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 999999999999999809858999
No 40
>d2g7sa2 a.121.1.1 (A:77-192) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.43 E-value=0.0059 Score=39.69 Aligned_cols=90 Identities=13% Similarity=0.003 Sum_probs=71.2
Q ss_pred CHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 46899999999999998708---089999999986164048999999999999999999999986488999999889999
Q T0575 85 DMFAYLRWLLDVGIQFQFHN---PRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAF 161 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~ 161 (216)
+|.+++..++..+....... .++...+..+....++...+.+......+...+.+.+++++..|+++++.|++..+.
T Consensus 2 dP~~rL~a~~~~~~~~~~~~~~~gCl~~~~a~E~~~~~~~v~~~~~~~~~~~~~~l~~~l~~a~~~g~~~~~~d~~~lA~ 81 (116)
T d2g7sa2 2 DPLEQLRAYIGYWEGCIADATHPFCVCALLASEIPVLPETVVLEVRAHFRSLSDWLTAVLERGIAQGRLVLTGTARANAE 81 (116)
T ss_dssp CHHHHHHHHHHHHHHHHHHCSSCSCHHHHHHTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCSSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 99999999999999986088999987989987661088899999999999999999999999988689787635789899
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q T0575 162 VLNVVFTELGNHL 174 (216)
Q Consensus 162 ~~~~~~~~~~~~~ 174 (216)
.+.+.+.|.....
T Consensus 82 ~l~~~~~G~~~~a 94 (116)
T d2g7sa2 82 IFMATVHGAMLSA 94 (116)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 41
>d1jt6a2 a.121.1.1 (A:73-187) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=97.39 E-value=0.0054 Score=40.03 Aligned_cols=111 Identities=9% Similarity=0.153 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 899999999999998708089999-9999861640489999999999999999999999864889999998899999999
Q T0575 87 FAYLRWLLDVGIQFQFHNPRLAQI-AYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNV 165 (216)
Q Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~ 165 (216)
.+++..+..........+|..-.. .+.......+...+.+..........+.+++++|++.|++++. |+...+..+.+
T Consensus 4 ~~klyg~a~~~~~~~~~~Pl~~a~~EF~~~~~~~~e~~~~i~~lr~~y~~~~~~Ii~eGi~~G~f~~~-d~~~~~~~il~ 82 (115)
T d1jt6a2 4 REKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSIN-DVNAVSKIAAN 82 (115)
T ss_dssp HHHHHHHHHHHHHHHHTCTTHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCS-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC-CHHHHHHHHHH
T ss_conf 89998199999999740779999999998330599999999999999999999999999987941066-79999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999633899077899999998899999999999999997001
Q T0575 166 VFTELGNHLIERFAVNPAELLREGGIVLLQPAMRRVIEQVIDILERGMR 214 (216)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~Gl~ 214 (216)
++.|+..|+. ..+.. ....+.+.+++++.+||.
T Consensus 83 ~lng~~~Wy~----~~g~~------------~~~~la~~~~~l~L~Gia 115 (115)
T d1jt6a2 83 AVNGIVTFTH----EQNIN------------ERIKLMNKFSQIFLNGLS 115 (115)
T ss_dssp HHHHHHHSCT----TSCHH------------HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHC----CCCCC------------CHHHHHHHHHHHHHHHCC
T ss_conf 9999999810----67978------------999999999999975429
No 42
>d1t56a2 a.121.1.1 (A:95-214) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.30 E-value=0.01 Score=37.93 Aligned_cols=96 Identities=16% Similarity=0.005 Sum_probs=80.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 66468999999999999987080899999999861640489999999999999999999999864889999998899999
Q T0575 83 TTDMFAYLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFV 162 (216)
Q Consensus 83 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~ 162 (216)
+.+|.+.++..+..+++.+..|....+.+... ....+...+............+...|++.++.|..++++|+..++..
T Consensus 2 ~~d~~~~~r~~~~a~~~~~~~h~~vm~a~~q~-a~~~~e~~~~w~~~~~~~i~~ia~~I~~~q~~G~a~~~ld~~~~A~A 80 (120)
T d1t56a2 2 DTDRENMWRTGINVFFETFGSHKAVTRAGQAA-RATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATA 80 (120)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTCHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 99889999999999999999729999999999-85389999999999999999999999999876999999999999999
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 99999999999996338
Q T0575 163 LNVVFTELGNHLIERFA 179 (216)
Q Consensus 163 ~~~~~~~~~~~~~~~~~ 179 (216)
+..+...+...+.....
T Consensus 81 L~~M~er~~~~~~~~~~ 97 (120)
T d1t56a2 81 LNLMNERTLFASFAGEQ 97 (120)
T ss_dssp HHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHCCCC
T ss_conf 99999999999874598
No 43
>d1rkta2 a.121.1.1 (A:83-205) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=97.18 E-value=0.013 Score=37.04 Aligned_cols=56 Identities=14% Similarity=0.093 Sum_probs=47.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 64048999999999999999999999986488999999889999999999999999
Q T0575 118 DVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNVVFTELGNH 173 (216)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (216)
..|.....+........+.+..+++++++.|++++++|++.++..+.+++.|+...
T Consensus 37 Rdpeir~~~~~~~~~~~~~l~~~i~~g~~~Ge~~~~vdp~~~A~~lva~idGl~l~ 92 (123)
T d1rkta2 37 RNEERRQYLEKRYDLFVERFSRLLQKGIDQGEFQPVQPLATIAKFFLNMNDGIIQN 92 (123)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999999999999999999998598688999999999999999679999
No 44
>d2fq4a2 a.121.1.1 (A:78-192) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=97.11 E-value=0.015 Score=36.53 Aligned_cols=113 Identities=16% Similarity=0.053 Sum_probs=68.0
Q ss_pred CHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 468999999999999987080-8999999998616404899999999999999999999998648899999988999999
Q T0575 85 DMFAYLRWLLDVGIQFQFHNP-RLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVL 163 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~ 163 (216)
+....+..++..+..+..... .....+..+...++.................+..+++.+++.|+++++.|++.+...+
T Consensus 2 slr~DL~~~~~~~~~~l~~~~g~~~~~li~e~~~~p~l~~~~~~~~~~~~~~~~~~~l~ra~~rGel~~d~d~~~~~d~~ 81 (115)
T d2fq4a2 2 SALNDILIHATSLANFLISREGTIINELVGEGQFDSKLAEEYRVRYFQPRRLQAKQLLEKGIKRGELKENLDIELSIDLI 81 (115)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTTTHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 88999999999999998295379999999986568889999999988999999999999999849988667899999999
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999963389907789999999889999999999999999700169
Q T0575 164 NVVFTELGNHLIERFAVNPAELLREGGIVLLQPAMRRVIEQVIDILERGMRRR 216 (216)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~Gl~~r 216 (216)
.+.+. ..++....... ...++.+++.+.+|+++|
T Consensus 82 ~g~l~---~r~l~~~~~~d----------------~~~~~~lvd~vl~g~~~r 115 (115)
T d2fq4a2 82 YGPIF---YRLLVTGEKLD----------------DSYVHDLVINAFEGIRLR 115 (115)
T ss_dssp HHHHH---HHHHTTCCCCC----------------HHHHHHHHHHHHHCSSCC
T ss_pred HHHHH---HHHHHCCCCCC----------------HHHHHHHHHHHHHHCCCC
T ss_conf 99999---99981799999----------------999999999999865689
No 45
>d2g3ba2 a.121.1.1 (A:74-189) Putative transcriptional regulator {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=97.05 E-value=0.017 Score=36.15 Aligned_cols=62 Identities=11% Similarity=0.116 Sum_probs=51.9
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 61640489999999999999999999999864889999998899999999999999999963
Q T0575 116 YDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNVVFTELGNHLIER 177 (216)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (216)
....+...+........+...+..++..+++.|++.++.|++..+..+.+++.|+...++..
T Consensus 35 A~~dp~~~~~~~~~~~~~~~~l~~ii~~g~~~G~~~~~~D~~~~A~~L~AliDGl~~~~l~~ 96 (116)
T d2g3ba2 35 AVYEEALRDPLARTTAAWVSEIADAIVQAQATGEISRSLDPQPTAVTMTALVEGLSGRWLCK 96 (116)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 74156889999999999999999999999855885888899999999999999999999817
No 46
>d2d6ya2 a.121.1.1 (A:75-192) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=97.00 E-value=0.0074 Score=38.97 Aligned_cols=81 Identities=14% Similarity=0.146 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999999999987080899999999861640489999999999999999999999864889999998899999999999
Q T0575 89 YLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNVVFT 168 (216)
Q Consensus 89 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~ 168 (216)
.+..++...+++...||.+.+++.++..+........ ..........+.+.+..|++.|.+++++|+..+...+.+++.
T Consensus 3 dL~~~a~~~fD~~~~~P~~~RL~~wEnL~~~~~~~~~-~~~~~~~~~~~~~~l~~g~~~G~fr~~~dp~~l~~~I~al~~ 81 (118)
T d2d6ya2 3 DIEGWIDRLLDYHAAHPELLRLLFWEGMEYGTAELPH-EAERQEHYARKVAAVRDGQERGVITDAIPAPDLLFLLVAMAN 81 (118)
T ss_dssp GHHHHHHHHHHHHHHCTHHHHHHHHHHHHHTTSCCTT-HHHHHHHHHHHHHHHHHHHHTTSSCCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 2899999999999858179999999986167755643-788877899999999999984998899999999999999999
Q ss_pred HH
Q ss_conf 99
Q T0575 169 EL 170 (216)
Q Consensus 169 ~~ 170 (216)
+.
T Consensus 82 ~~ 83 (118)
T d2d6ya2 82 WA 83 (118)
T ss_dssp HH
T ss_pred HH
T ss_conf 98
No 47
>d1zk8a2 a.121.1.1 (A:78-182) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=96.13 E-value=0.031 Score=34.17 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 46899999999999998708089999999986164048999999999999999999999986488999999889999999
Q T0575 85 DMFAYLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLN 164 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~ 164 (216)
++.+.+..+...|++|...||..+++++. ..+.... .. ....+.+.+.++.+.+. +.++...+..++
T Consensus 2 ~~ee~l~al~~aY~~FA~~~P~~y~lmf~----~~~~~~~----~~----~~~~~~l~~~~~~~~~~-~~d~~~~a~~lW 68 (105)
T d1zk8a2 2 RMDEAIHALGEAYVAFVRKHPGLYEATFL----RDEEVRK----AG----DGIVKLCLQVLQQYGLE-GENALHATRGFR 68 (105)
T ss_dssp CHHHHHHHHHHHHHHHHHHCHHHHHHTTC----CCHHHHH----HH----HHHHHHHHHHHGGGTCC-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHC----CCCCHHH----HH----HHHHHHHHHHHHHHCCC-CCCHHHHHHHHH
T ss_conf 88999999999999999979398898868----9812078----99----99999999999850899-866999999999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999633899077899999998899999999999999997001
Q T0575 165 VVFTELGNHLIERFAVNPAELLREGGIVLLQPAMRRVIEQVIDILERGMR 214 (216)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~Gl~ 214 (216)
+.+.|+....+......+.+ ..+.++..++.+..|||
T Consensus 69 a~vHG~~~L~~~g~~~~~~d-------------~~~~~~~~~~~~l~Glr 105 (105)
T d1zk8a2 69 SICHGFASIEQQGGFGLPLD-------------LDISLHVLLETFIKGLR 105 (105)
T ss_dssp HHHHHHHHHHHHTCCCSSSC-------------HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCCC-------------HHHHHHHHHHHHHHHCC
T ss_conf 99992999985499999879-------------99999999999997748
No 48
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=95.76 E-value=0.0046 Score=40.58 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=28.6
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 999999998749103547999998477854554026888
Q T0575 18 IDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 18 l~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
++.|.+++. .| .|+.+||+..|||+.|||+|||..
T Consensus 11 ~~~a~~l~~-~G---~s~~~iA~~~gVSr~TiYry~pa~ 45 (47)
T d1ijwc_ 11 QEQISRLLE-KG---HPRQQLAIIFGIGVSTLYRYFPAS 45 (47)
T ss_dssp HHHHHHHHH-TT---CCHHHHHHHHTCCHHHHHHHSCST
T ss_pred HHHHHHHHH-CC---CCHHHHHHHHCCCHHHHHHHCCCC
T ss_conf 999999998-89---979999999796999998557755
No 49
>d2i10a2 a.121.1.1 (A:79-194) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=95.52 E-value=0.018 Score=35.99 Aligned_cols=89 Identities=15% Similarity=0.029 Sum_probs=61.5
Q ss_pred CHHHHHHHHHHHHHHHHHHC--H--HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 46899999999999998708--0--8999999998616404899999999999999999999998648899999988999
Q T0575 85 DMFAYLRWLLDVGIQFQFHN--P--RLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAA 160 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~ 160 (216)
+..+.+..++...++..... | ++......+.....+.....+......+...+...++++++.|+++++.|++..+
T Consensus 2 t~~eai~~~l~~~i~~~~~~~~p~GCl~~~~~~E~~~~d~~i~~~l~~~~~~~~~~l~~~l~~a~~~Gel~~~~d~~~lA 81 (116)
T d2i10a2 2 TAHEAVLDFLTGRVEVFTAPGQPFGCMTVQAGLASGEPHHEIVDLLTAAREQMRQTVLDRFEKALADGDLPAGTDCTALA 81 (116)
T ss_dssp SHHHHHHHHHHHHHHHHC------CCCCSSCBTTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 89999999999999997489999977999857530566099999999999999999999999998768998877899999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q T0575 161 FVLNVVFTELGNH 173 (216)
Q Consensus 161 ~~~~~~~~~~~~~ 173 (216)
.++...+.|+...
T Consensus 82 ~~l~~~~~Gl~~~ 94 (116)
T d2i10a2 82 RYVMAAVYGLSVE 94 (116)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 50
>d1ui5a2 a.121.1.1 (A:80-212) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=94.86 E-value=0.083 Score=30.84 Aligned_cols=83 Identities=12% Similarity=0.047 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 89999999999999870808999999998616404899999999999999999999998648899999988999999999
Q T0575 87 FAYLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNVV 166 (216)
Q Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~ 166 (216)
.+.+..+..........+|- .+.......+... ...........+...+...+.++++.|++++++|++.++..+.+.
T Consensus 4 le~lvd~s~~la~~~~~dPv-vrag~eLa~~~~~-~r~~l~~~f~~W~~~l~~~L~~a~~~Gel~~d~dp~~lA~~lva~ 81 (133)
T d1ui5a2 4 LEALMRLTFGMARLCVQGPV-LRAGLRLATAGVP-VRPPLPHPFTEWREIATSRLLDAVRQSDVHQDIDVDSVAHTLVCS 81 (133)
T ss_dssp HHHHHHHHHHHHHHHHHCHH-HHHHHHHHHTTCC-CCC-CCCHHHHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHH-HHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999998333748-8889998024433-677888999999999999999999869977889999999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q T0575 167 FTELG 171 (216)
Q Consensus 167 ~~~~~ 171 (216)
+.|+.
T Consensus 82 ~~G~~ 86 (133)
T d1ui5a2 82 VVGTR 86 (133)
T ss_dssp HHCTT
T ss_pred HHHHH
T ss_conf 99899
No 51
>d2id3a2 a.121.1.1 (A:81-203) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=93.37 E-value=0.31 Score=26.42 Aligned_cols=83 Identities=14% Similarity=0.073 Sum_probs=56.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCHHHH---HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 66468999999999999987080899---999999861640489999999999999999999999864889999998899
Q T0575 83 TTDMFAYLRWLLDVGIQFQFHNPRLA---QIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTA 159 (216)
Q Consensus 83 ~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~ 159 (216)
.++....+..++..+...... |... +.+..+.. ..+.....+..........+..+++++++.|+++++.|++.+
T Consensus 3 TGsLr~DL~~~l~~~~~~l~~-p~~~~~~~~l~ae~~-~~p~l~~~~~~~~~~r~~~~~~il~rA~~RGEl~~~~d~~~~ 80 (123)
T d2id3a2 3 TGALEEDLRANARLVVRTLDD-PRQGRLFRALIAASL-CNEQAAEALHRFYAVRVDEWAGCVRDAVARGEVPDGTDPHGV 80 (123)
T ss_dssp CSSHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCTTBCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 884999999999999999709-506899999999846-888999999999999999999999999983888987538899
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q T0575 160 AFVLNVVF 167 (216)
Q Consensus 160 ~~~~~~~~ 167 (216)
...+.+.+
T Consensus 81 ~d~l~g~l 88 (123)
T d2id3a2 81 VAAVSAPL 88 (123)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 52
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=93.28 E-value=0.066 Score=31.62 Aligned_cols=42 Identities=14% Similarity=0.305 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC-CHHHHHCCCC
Q ss_conf 889999999999998749103547999998477-8545540268
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGI-AKGSFYQYFA 54 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agv-s~~tiY~~F~ 54 (216)
+|+++|++.-.+-+.++|+ .-|+++||+..|+ |++++++|..
T Consensus 5 ~rQ~~vL~~I~~~~~~~G~-~Ps~rei~~~~g~~S~stv~~~l~ 47 (71)
T d1jhfa1 5 ARQQEVFDLIRDHISQTGM-PPTRAEIAQRLGFRSPNAAEEHLK 47 (71)
T ss_dssp HHHHHHHHHHHHHHHHHSS-CCCHHHHHHHTTCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC-CCCHHHHHHHCCCCCHHHHHHHHH
T ss_conf 9999999999999998288-988999997729999999999999
No 53
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=92.88 E-value=0.03 Score=34.27 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH
Q ss_conf 354799999847785455402688889999999
Q T0575 32 SVSINRITERAGIAKGSFYQYFADKKDCYLYLI 64 (216)
Q Consensus 32 ~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~ 64 (216)
++|+.|||+.+|||++|+-+.+.++..+=.+.-
T Consensus 1 NvTi~dvA~~agvS~~TVSr~Ln~~~~Vs~~tr 33 (57)
T d2hsga1 1 NVTIYDVAREASVSMATVSRVVNGNPNVKPSTR 33 (57)
T ss_dssp CCCHHHHHHHTTSCHHHHHHHHTTCTTSCHHHH
T ss_pred CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH
T ss_conf 969999998989599999999689886798999
No 54
>d2o7ta2 a.121.1.1 (A:79-188) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=92.88 E-value=0.13 Score=29.32 Aligned_cols=76 Identities=11% Similarity=0.022 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 64689999999999999870808999999998616404899999999999999999999998648899999988999999
Q T0575 84 TDMFAYLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVL 163 (216)
Q Consensus 84 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~ 163 (216)
.+|++.+..++....+... ..+.............+.+..........+..++..+++.|.+++++.+..+...+
T Consensus 1 ~DP~~Al~~~~~~~ve~~~-----~~l~~al~~~~~~~~~~~~~~~r~~l~~~~~~ll~rA~~aG~iR~Dv~~~D~~~ll 75 (110)
T d2o7ta2 1 TDPEGVWTSFNQLLFDRGL-----GSLVPALAPESLDDLPDEVSALRRTTEKNTTTLINLAKQHGLVHHDIAPGTYIVGL 75 (110)
T ss_dssp GCHHHHHHHHHHHHHHTTH-----HHHHHHHCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH-----HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 9889999999999999867-----66677873046676888999999999999999999999819988999999999999
Q ss_pred H
Q ss_conf 9
Q T0575 164 N 164 (216)
Q Consensus 164 ~ 164 (216)
.
T Consensus 76 ~ 76 (110)
T d2o7ta2 76 I 76 (110)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 55
>d2fbqa2 a.121.1.1 (A:81-214) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=92.85 E-value=0.36 Score=25.87 Aligned_cols=121 Identities=12% Similarity=0.144 Sum_probs=70.7
Q ss_pred CHHHHHHHHHHHHHHHHHHC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 46899999999999998708----08999999998616404899999999999999999999998648899999988999
Q T0575 85 DMFAYLRWLLDVGIQFQFHN----PRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAA 160 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~ 160 (216)
+..+.+..++...++..... ..+.+++.....+..+...+.+..........+...+.+. -|+++++.+.
T Consensus 5 tle~~l~a~~~p~l~~~~~~~~~~~~f~rLl~R~~~ep~~~lr~~~~~~~~p~~~rf~~al~~a------lP~l~~~el~ 78 (134)
T d2fbqa2 5 TLEDLLHLLVSQAMAVKPRSGNDLSIFMRLLGLAFSQSQGHLRKYLEEVYGKVFRRYMLLVNEA------APKLPPIELF 78 (134)
T ss_dssp CHHHHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH------SCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCHHHHH
T ss_conf 9999999999899885326897425999999999629809999999998899999999999998------5289999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999999999996338990778999999988999999999999999970016
Q T0575 161 FVLNVVFTELGNHLIERFAVNPAELLREGGIVLLQPAMRRVIEQVIDILERGMRR 215 (216)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~Gl~~ 215 (216)
+.+..++..+...+....... .... .........+..++.+++++..||++
T Consensus 79 wr~~f~vga~~~~l~~~~~~~---~l~~-~~~~~~~d~e~~~~~Li~F~~aGl~A 129 (134)
T d2fbqa2 79 WRVHFMLGAAAFSMSGIKALR---AMAE-TDFGVNTSTEQVMHLMVPFFAAGMRA 129 (134)
T ss_dssp HHHHHHHHHHHHHHHTHHHHH---HHHH-HHHSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHCCHHHH---HHCC-CCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999998206998---7145-65688888999999999999999667
No 56
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=92.72 E-value=0.088 Score=30.62 Aligned_cols=43 Identities=26% Similarity=0.524 Sum_probs=31.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCC
Q ss_conf 9888667887888999999999999874910354799999847785455402
Q T0575 1 MPTETFFNLPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQY 52 (216)
Q Consensus 1 Mp~~~~~~~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~ 52 (216)
||+++| |.|-|.++++ +..+. ++.|+.+||++.|||.+|||+.
T Consensus 1 M~rk~Y---s~EfK~~aV~----l~~~~--~g~s~~~vA~~lGIs~~tl~~W 43 (89)
T d2jn6a1 1 MPTKTY---SEEFKRDAVA----LYENS--DGASLQQIANDLGINRVTLKNW 43 (89)
T ss_dssp CCCCCC---CHHHHHHHHH----HHTTG--GGSCHHHHHHHHTSCHHHHHHH
T ss_pred CCCCCC---CHHHHHHHHH----HHHHC--CCCCHHHHHHHHCCCHHHHHHH
T ss_conf 947989---9999999999----99982--9985999999979898899999
No 57
>d2ao9a1 a.4.1.17 (A:13-132) Phage protein BC1890 {Bacillus cereus [TaxId: 1396]}
Probab=91.53 E-value=0.15 Score=28.89 Aligned_cols=47 Identities=9% Similarity=0.259 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCC-CCHH
Q ss_conf 8889999999999998749103547999998477854554026-8888
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYF-ADKK 57 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F-~sKe 57 (216)
.+++...+-+--++..+.|-++-|-.+||.+.|||+.++|+.= .+|.
T Consensus 15 ~q~~AA~~l~~Ne~~~~~~~ekktqeqiAeelGisr~tLyrWrt~dk~ 62 (120)
T d2ao9a1 15 KQIQAAYLLVENELMESNNEEKRTQDEMANELGINRTTLWEWRTKNQD 62 (120)
T ss_dssp HHHHHHHHHHHHHHCC---CCCCCHHHHHHHHTCCHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCHH
T ss_conf 999999998603001100033414999999958018889887606626
No 58
>d1t33a2 a.121.1.1 (A:89-220) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=91.39 E-value=0.52 Score=24.65 Aligned_cols=98 Identities=8% Similarity=0.079 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH------
Q ss_conf 80899999999861640489999999999999999999999864889999998899999999999999999963------
Q T0575 104 NPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNVVFTELGNHLIER------ 177 (216)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 177 (216)
+....+++..+..+..+.....+..........+..++.+....+ .+.+.+.....+++..+..+.+..
T Consensus 27 ~~~~~~l~~RE~~~PT~a~~~l~~~~i~P~~~~l~~ll~~~~G~~-----~~d~~~~~~~~sivGq~l~f~var~~~l~~ 101 (132)
T d1t33a2 27 TVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCD-----ANDTRMILHTHALLGEVLAFRLGKETILLR 101 (132)
T ss_dssp GHHHHHHHHHHHHSCCHHHHHHHHHTHHHHHHHHHHHHHHHHTCC-----TTSHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 332999999981295699999999973029999999999987809-----887899999999999999999989999986
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf --38990778999999988999999999999999970016
Q T0575 178 --FAVNPAELLREGGIVLLQPAMRRVIEQVIDILERGMRR 215 (216)
Q Consensus 178 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~Gl~~ 215 (216)
+.....+ ....+...+...++++.+|||+
T Consensus 102 lgw~~~~~~---------~~~~i~~~i~~~~~~lL~GL~~ 132 (132)
T d1t33a2 102 TGWPQFDEE---------KAELIYQTVTCHIDLILHGLTQ 132 (132)
T ss_dssp HTCSSCCHH---------HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHH---------HHHHHHHHHHHHHHHHHHHHCC
T ss_conf 287758989---------9999999999999999862329
No 59
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=91.12 E-value=0.036 Score=33.61 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH
Q ss_conf 354799999847785455402688889999999
Q T0575 32 SVSINRITERAGIAKGSFYQYFADKKDCYLYLI 64 (216)
Q Consensus 32 ~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~ 64 (216)
.+||.|||+.+|||++|+-+++.++..+=.+.-
T Consensus 2 ~~Ti~diA~~agvS~sTVSr~l~~~~~vs~~tr 34 (59)
T d1efaa1 2 PVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTR 34 (59)
T ss_dssp CCCHHHHHHTTTSCHHHHHHHHTTCSSCCTHHH
T ss_pred CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH
T ss_conf 888999998979799999999779986799999
No 60
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=90.33 E-value=0.051 Score=32.44 Aligned_cols=30 Identities=10% Similarity=0.150 Sum_probs=25.3
Q ss_pred CCHHHHHHHHCCCHHHHHCCCCCHHHHHHH
Q ss_conf 547999998477854554026888899999
Q T0575 33 VSINRITERAGIAKGSFYQYFADKKDCYLY 62 (216)
Q Consensus 33 ~t~~~IA~~agvs~~tiY~~F~sKe~L~~~ 62 (216)
.|+.|||+.+|||++|+-+.+.++..+=.+
T Consensus 1 ATi~dvA~~agVS~sTVSr~ln~~~~vs~~ 30 (57)
T d1qpza1 1 ATIKDVAKRANVSTTTVSHVINKTRFVAEE 30 (57)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHHTCSCCCHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHCCCCCCCHH
T ss_conf 989999999895999999997799856899
No 61
>d1sgma2 a.121.1.1 (A:78-188) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=90.05 E-value=0.21 Score=27.70 Aligned_cols=90 Identities=3% Similarity=-0.063 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHCH----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 6468999999999999987080----899999999861640489999999999999999999999864889999998899
Q T0575 84 TDMFAYLRWLLDVGIQFQFHNP----RLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTA 159 (216)
Q Consensus 84 ~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~ 159 (216)
.+|.+.+..++..+........ +....+..+.....+........... .+...+......+.. ++.+++.+
T Consensus 1 sdP~e~l~~~~~~~~~~~~~~~~~~GC~~~~~a~E~~~~~e~ir~~~~~~~~----~~~~~l~~~l~~~~~-~~~~~~~l 75 (111)
T d1sgma2 1 SDPVEAIQLFIKKTASQFDNTESIKGIPVGLLASETALISEPLRTVCMKVFK----SWEAVFARKLMENGF-AEEEANQL 75 (111)
T ss_dssp SSHHHHHHHHHHHHHHTTSSGGGCCCCTTHHHHHHHTTSCHHHHHHHHHHHH----HHHHHHHHHHHHTTC-CHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH----HHHHHHHHHHHHCCC-CCCCHHHH
T ss_conf 9999999999999999870679999981989997763288899999999999----999999999987499-92119999
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999633
Q T0575 160 AFVLNVVFTELGNHLIERF 178 (216)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~ 178 (216)
+..+...+.|.........
T Consensus 76 A~~l~~~~~Ga~~~ar~~~ 94 (111)
T d1sgma2 76 GTLINSMIEGGIMLSLTNK 94 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999998818
No 62
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=89.77 E-value=0.19 Score=28.11 Aligned_cols=46 Identities=15% Similarity=0.321 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC--CHHHHHCCCCCHHH
Q ss_conf 889999999999998749103547999998477--85455402688889
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGI--AKGSFYQYFADKKD 58 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agv--s~~tiY~~F~sKe~ 58 (216)
+|++.||++-.+.+.+.|+ -++.++|++..|+ |.+|+.+|...-++
T Consensus 4 ~Rq~~IL~~Ive~y~~~g~-Pv~s~~i~~~~~l~~S~aTIRn~m~~LE~ 51 (87)
T d1stza1 4 DRQRKVLYCIVREYIENKK-PVSSQRVLEVSNIEFSSATIRNDMKKLEY 51 (87)
T ss_dssp HHHHHHHHHHHHHHHHHCS-CBCHHHHHHHSCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 8999999999999998098-46799999870889898999999999998
No 63
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]} SCOP: d1biba1 d2ewna1 d1hxda1
Probab=89.42 E-value=0.17 Score=28.38 Aligned_cols=41 Identities=15% Similarity=0.212 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 88899999999999987491035479999984778545540268888
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
.+++.+||+ ++.+++ .+|..+||++.|||+.|+++|...-+
T Consensus 4 ~~~~~~IL~----~L~~~~--~~s~~eLa~~l~vS~~Tv~r~i~~L~ 44 (63)
T d1biaa1 4 NTVPLKLIA----LLANGE--FHSGEQLGETLGMSRAAINKHIQTLR 44 (63)
T ss_dssp CHHHHHHHH----HHTTSS--CBCHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHCCC--CCCHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 068899999----998289--83778999870999835789999998
No 64
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=89.27 E-value=0.15 Score=28.90 Aligned_cols=41 Identities=24% Similarity=0.384 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 99999999998749103547999998477854554026888
Q T0575 16 RLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 16 ~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
..++.+.+.+.++=-+.+|+.++|+.+|+|+.++++.|+..
T Consensus 3 ~~i~~v~~yI~~~~~~~~tl~~lA~~~~~s~~~l~r~Fk~~ 43 (54)
T d1bl0a1 3 ITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKE 43 (54)
T ss_dssp HHHHHHHHHHHTTTTSCCCCHHHHHHSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 99999999998654799999999999893999999999999
No 65
>d1jt6b2 a.121.1.1 (B:73-187) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]} SCOP: d1jt0a2 d1jt0d2
Probab=89.26 E-value=0.76 Score=23.36 Aligned_cols=78 Identities=10% Similarity=0.153 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 40489999999999999999999999864889999998899999999999999999963389907789999999889999
Q T0575 119 VPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNVVFTELGNHLIERFAVNPAELLREGGIVLLQPAM 198 (216)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (216)
++...+.+..+.......+..++.+|+..|++..+ +.+.....+.+.+.|+...+.. .-...+
T Consensus 37 S~ev~~kl~~L~~~~~d~~~~Ii~EG~qsgef~i~-nv~~~~~il~~~l~GL~~ly~~----------------~~~~e~ 99 (115)
T d1jt6b2 37 TNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSIN-DVNAVSKIAANAVNGIVTFTHE----------------QNINER 99 (115)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCS-CHHHHHHHHHHHHHHHHHHTTT----------------SCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHCCC----------------CCHHHH
T ss_conf 88899999843334899999999845767860103-2378999999999887652257----------------688889
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999999700
Q T0575 199 RRVIEQVIDILERGM 213 (216)
Q Consensus 199 ~~~~~~~l~~l~~Gl 213 (216)
.+..++.++++.+||
T Consensus 100 ~~l~kkAI~IfL~gi 114 (115)
T d1jt6b2 100 IKLMNKFSQIFLNGL 114 (115)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999998605
No 66
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.09 E-value=0.084 Score=30.77 Aligned_cols=42 Identities=21% Similarity=0.284 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 999999999998749103547999998477854554026888
Q T0575 15 SRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 15 ~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
..|++.+.+-+.++=-+.+|+.++|+.+|+|+.++.+.|+..
T Consensus 2 ~~ii~~i~~yi~~~~~~~itl~~lA~~~~~S~~~l~r~Fk~~ 43 (54)
T d1d5ya1 2 AGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDV 43 (54)
T ss_dssp HHHHHHHHHHHHTTSSSSCCCHHHHTTTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 799999999998744899999999999892999999999999
No 67
>d2np5a2 a.121.1.1 (A:78-195) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=88.86 E-value=0.81 Score=23.16 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999864889999998899999999999999999963389907789999999889999999999999999
Q T0575 131 HGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNVVFTELGNHLIERFAVNPAELLREGGIVLLQPAMRRVIEQVIDILE 210 (216)
Q Consensus 131 ~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 210 (216)
......+.+.+...+..+ .+.|++..+..+.+++.|+....+......+.+. .+..++..++.+.
T Consensus 47 ~~~~~~~~~~l~~~l~~~---~~~d~~~~A~~L~aliDGL~~~~l~~p~~~~~e~------------~~~~l~~~ld~~l 111 (118)
T d2np5a2 47 RKTLFTIRTGLSAVLIGI---GTPEAETRAALLLATVDGLALDAIGSPALYPPEY------------LEHALDIQIGMIL 111 (118)
T ss_dssp HHHHHHHHHHHHHHHHTT---TCTTHHHHHHHHHHHHHHHHHHHHHCGGGSCHHH------------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH------------HHHHHHHHHHHHH
T ss_conf 999999999999999860---7998899999999999317998732867799999------------9999999999997
Q ss_pred HH
Q ss_conf 70
Q T0575 211 RG 212 (216)
Q Consensus 211 ~G 212 (216)
.|
T Consensus 112 ~~ 113 (118)
T d2np5a2 112 QG 113 (118)
T ss_dssp TT
T ss_pred CC
T ss_conf 63
No 68
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.97 E-value=0.069 Score=31.43 Aligned_cols=26 Identities=15% Similarity=0.300 Sum_probs=22.8
Q ss_pred CCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 54799999847785455402688889
Q T0575 33 VSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 33 ~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
+|+.|||+.+|||++|+-+.+.++.+
T Consensus 1 vTl~diA~~agvS~sTVSrvLn~~~~ 26 (59)
T d1uxda_ 1 MKLDEIARLAGVSRTTASYVINGKAK 26 (59)
T ss_dssp CCHHHHHHHHTSCTTHHHHHHHTCGG
T ss_pred CCHHHHHHHHCCCHHHHHHHHCCCCC
T ss_conf 97999999979699999999849987
No 69
>d1pdnc_ a.4.1.5 (C:) Paired protein (prd) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=86.10 E-value=0.58 Score=24.28 Aligned_cols=38 Identities=13% Similarity=0.364 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCC
Q ss_conf 8878889999999999998749103547999998477854554026
Q T0575 8 NLPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 8 ~~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F 53 (216)
.+|.+.|++|+++. +. +.+.++||++.|||.+++++..
T Consensus 16 pLs~dlR~rIv~~~-----~~---G~s~r~iA~~~~VS~~tV~k~l 53 (123)
T d1pdnc_ 16 PLPNNIRLKIVEMA-----AD---GIRPCVISRQLRVSHGCVSKIL 53 (123)
T ss_dssp CCCHHHHHHHHHHH-----HT---TCCHHHHHHHHTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-----HH---CCCHHHHHHHHCCCHHHHHHHH
T ss_conf 79899999999999-----80---4899999999896999999999
No 70
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.70 E-value=0.73 Score=23.52 Aligned_cols=40 Identities=15% Similarity=0.274 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 788899999999999987491035479999984778545540268
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
.++|+.+|++ ++.++. ..+|..++|+..|||+.|++++..
T Consensus 5 k~eR~~~Il~----~L~~~~-~~vs~~~La~~l~VS~~TI~rdi~ 44 (65)
T d1j5ya1 5 RQERLKSIVR----ILERSK-EPVSGAQLAEELSVSRQVIVQDIA 44 (65)
T ss_dssp HHHHHHHHHH----HHHHCS-SCBCHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHH----HHHHCC-CCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 9999999999----999859-978599999997989999999999
No 71
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=82.94 E-value=0.54 Score=24.53 Aligned_cols=32 Identities=25% Similarity=0.448 Sum_probs=25.8
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 999874910354799999847785455402688
Q T0575 23 DEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 23 ~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
+.|.+.+ ..+|+.+||++.|++++|+|++-.+
T Consensus 12 ~~~a~~~-~~~s~~eia~~~~~~~st~~rll~t 43 (75)
T d1mkma1 12 DFIVKNP-GDVSVSEIAEKFNMSVSNAYKYMVV 43 (75)
T ss_dssp HHHHHCS-SCBCHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 9998579-9989999999979199999999999
No 72
>d2ezla_ a.4.1.2 (A:) Ibeta subdomain of the mu end DNA-binding domain of phage mu transposase {Bacteriophage mu [TaxId: 10677]}
Probab=82.90 E-value=0.62 Score=24.08 Aligned_cols=40 Identities=0% Similarity=0.043 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHCCCCC-CCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 9999999999998749103-5479999984778545540268
Q T0575 14 RSRLIDVLLDEFAQNDYDS-VSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~~~-~t~~~IA~~agvs~~tiY~~F~ 54 (216)
|-.++.+...| .+.|+.. ..+..||.+.|||++|+|++|.
T Consensus 35 RL~~l~~V~~L-~~~G~~~~~A~~~VA~~~~vs~~TL~nW~~ 75 (99)
T d2ezla_ 35 WLPAVQAADEM-LNQGISTKTAFATVAGHYQVSASTLRDKYY 75 (99)
T ss_dssp HHHHHHHHHHH-HHTTCCHHHHHHHHHHHSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHCCCCHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99999999999-986970899999999995988999999999
No 73
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=81.73 E-value=0.51 Score=24.70 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 8899999999999987491035479999984778545540268
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
+++.+|++ ++.+++ .+|..++|++.|||+.|+|++..
T Consensus 5 ~~~~~iL~----~L~~~~--~~s~~eLa~~l~vS~~ti~r~i~ 41 (63)
T d1biaa1 5 TVPLKLIA----LLANGE--FHSGEQLGETLGMSRAAINKHIQ 41 (63)
T ss_dssp HHHHHHHH----HHTTSS--CBCHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHH----HHHHCC--CCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 79999999----999789--58799999998939999999999
No 74
>d2gfna2 a.121.1.1 (A:81-199) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=81.48 E-value=1.6 Score=20.79 Aligned_cols=47 Identities=19% Similarity=0.234 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999864889999998899999999999999
Q T0575 125 TMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNVVFTELG 171 (216)
Q Consensus 125 ~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (216)
.+..+...+.....+.+.+++.+|....++|++.+...+.++..|+.
T Consensus 44 eia~flarwr~vvr~~v~~aq~egtv~ad~d~d~vtv~lv~ltdgla 90 (119)
T d2gfna2 44 EIAAFLARWRGVVRESVVAAQREGTVSTDLDADAVTVALVALTDGLA 90 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHH
T ss_conf 99999999999999999999865886676786604654231033077
No 75
>d1k78a1 a.4.1.5 (A:19-81) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.29 E-value=1.3 Score=21.61 Aligned_cols=37 Identities=19% Similarity=0.407 Sum_probs=30.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCC
Q ss_conf 887888999999999999874910354799999847785455402
Q T0575 8 NLPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQY 52 (216)
Q Consensus 8 ~~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~ 52 (216)
.+|-+-|++|+++. +. +.|.++||++-+||++++.+.
T Consensus 14 Pls~DLR~Riv~~~-----~~---G~s~r~aA~rf~VS~s~v~k~ 50 (63)
T d1k78a1 14 PLPDVVRQRIVELA-----HQ---GVRPCDISRQLRVSHGCVSKI 50 (63)
T ss_dssp CCCHHHHHHHHHHH-----HT---TCCHHHHHHHHTCCHHHHHHH
T ss_pred CCCHHHHHHHHHHH-----HC---CCCHHHHHHHHCCCHHHHHHH
T ss_conf 59999999999999-----95---998999999959779999999
No 76
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=80.27 E-value=1.1 Score=22.18 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999999987491035479999984778545540268888999999999999
Q T0575 14 RSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLIQLGIE 69 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~~~~~~ 69 (216)
+..|-+.-.++-.++| .|..++|+.+|+|+++++++..++-..=...+..+..
T Consensus 6 ~~~ig~~lr~~R~~~g---~sq~~lA~~~gis~~~i~~~E~g~~~p~~~~l~~ia~ 58 (79)
T d1y9qa1 6 KSQIANQLKNLRKSRG---LSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIAS 58 (79)
T ss_dssp HHHHHHHHHHHHHHTT---CCHHHHHHHHSSCHHHHHHHHTTCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC---CCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 9999999999999829---9999999987711648999986998999999999999
No 77
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=80.26 E-value=1.3 Score=21.59 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=26.9
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 999999987491035479999984778545540268
Q T0575 19 DVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 19 ~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
...++++.++| .+|..+||+..|+|++|+.++-.
T Consensus 9 ~~Il~~l~~~g--~~sr~eLa~~~glS~~Tv~~~l~ 42 (71)
T d1z05a1 9 GRVYKLIDQKG--PISRIDLSKESELAPASITKITR 42 (71)
T ss_dssp HHHHHHHHHHC--SBCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHCC--CCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 99999999859--94899999998878878999999
No 78
>d2p4wa1 a.4.5.64 (A:1-194) Transcriptional regulatory protein PF1790 {Pyrococcus furiosus [TaxId: 2261]}
Probab=79.19 E-value=0.69 Score=23.68 Aligned_cols=42 Identities=14% Similarity=0.295 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 8788899999999999987491035479999984778545540268888
Q T0575 9 LPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 9 ~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
+++.+|.+|+..- . +| ..|+.+||+..|+|++++++|-..-+
T Consensus 12 l~~~~R~~Il~~L----~-~~--~~~~~ela~~l~~s~~~v~~HL~~L~ 53 (194)
T d2p4wa1 12 LGNETRRRILFLL----T-KR--PYFVSELSRELGVGQKAVLEHLRILE 53 (194)
T ss_dssp HHSHHHHHHHHHH----H-HS--CEEHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHH----H-HC--CCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 5999999999999----8-08--98799999998909989999999999
No 79
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=79.00 E-value=1.8 Score=20.44 Aligned_cols=38 Identities=11% Similarity=0.147 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCC
Q ss_conf 8999999999999874910354799999847785455402
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQY 52 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~ 52 (216)
..+..|.+-..+-.++| .++..+||+..|||++|+-.-
T Consensus 4 s~EdYLk~I~~l~~~~~--~v~~~~iA~~L~vs~~SVs~m 41 (61)
T d2ev0a1 4 SMEDYIEQIYMLIEEKG--YARVSDIAEALAVHPSSVTKM 41 (61)
T ss_dssp HHHHHHHHHHHHHHHHS--SCCHHHHHHHHTCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCC--CCCHHHHHHHHCCCCHHHHHH
T ss_conf 29999999999983589--750999999958995159999
No 80
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=78.75 E-value=1.9 Score=20.36 Aligned_cols=22 Identities=27% Similarity=0.380 Sum_probs=19.2
Q ss_pred CCCCHHHHHHHHCCCHHHHHCC
Q ss_conf 0354799999847785455402
Q T0575 31 DSVSINRITERAGIAKGSFYQY 52 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~ 52 (216)
..+|..+||+..|+|+++++..
T Consensus 40 ~plt~~ela~~l~vsk~~vs~~ 61 (151)
T d1ku9a_ 40 KPLTISDIMEELKISKGNVSMS 61 (151)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHH
T ss_pred CCCCHHHHHHHHCCCCCHHHHH
T ss_conf 8928999999867770249999
No 81
>d1ulya_ a.4.5.58 (A:) Hypothetical protein PH1932 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=78.70 E-value=0.53 Score=24.57 Aligned_cols=39 Identities=18% Similarity=0.416 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 7888999999999999874910354799999847785455402688
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
.+.+|.+|++ ++. +| ..|+.+||+..|+|++++|+|-..
T Consensus 17 ~~p~R~~Il~----~L~-~~--~~s~~ela~~lg~s~~~v~~hl~~ 55 (190)
T d1ulya_ 17 LEDTRRKILK----LLR-NK--EMTISQLSEILGKTPQTIYHHIEK 55 (190)
T ss_dssp HSHHHHHHHH----HHT-TC--CBCHHHHHHHHTCCHHHHHHHHHH
T ss_pred CCHHHHHHHH----HHH-HC--CCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 9999999999----998-19--987999999989199999999999
No 82
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=78.38 E-value=1.4 Score=21.29 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 88999999999999874910354799999847785455402688889
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
+-++.|-+.-.++-.++| .|..++|+.+|+|++++.++-.++-.
T Consensus 6 ~~~~~~g~~ik~~R~~~g---ltq~~lA~~~gis~~~i~~~e~g~~~ 49 (77)
T d2b5aa1 6 EIKRKFGRTLKKIRTQKG---VSQEELADLAGLHRTYISEVERGDRN 49 (77)
T ss_dssp HHHHHHHHHHHHHHHHTT---CCHHHHHHHHTCCHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHHHHCC---CCHHHHHHHHCCCHHHHHHHHCCCCC
T ss_conf 999999999999999809---99999998979799999999869989
No 83
>d1gdta1 a.4.1.2 (A:141-183) gamma,delta resolvase (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=78.22 E-value=0.64 Score=23.97 Aligned_cols=26 Identities=19% Similarity=0.397 Sum_probs=20.6
Q ss_pred HHHCCCCCCCHHHHHHHHCCCHHHHHCCC
Q ss_conf 98749103547999998477854554026
Q T0575 25 FAQNDYDSVSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 25 f~~~G~~~~t~~~IA~~agvs~~tiY~~F 53 (216)
+.++| .+..+||++.||++.++|+-.
T Consensus 14 L~~~G---~gat~IAk~lgI~R~SVYR~L 39 (43)
T d1gdta1 14 MWQQG---LGASHISKTMNIARSTVYKVI 39 (43)
T ss_dssp HHHTT---CCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHCC---CCHHHHHHHHCCCHHHHHHHH
T ss_conf 99948---989999999798799999998
No 84
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=76.79 E-value=1.7 Score=20.73 Aligned_cols=42 Identities=14% Similarity=0.290 Sum_probs=31.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 7887888999999999999874910354799999847785455402688
Q T0575 7 FNLPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 7 ~~~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
.-+++.+|-+|+..- .+ | ..++.+|++..|+|.+++.+|.+-
T Consensus 13 kaL~d~~Rl~Il~~L----~~-~--~~~v~el~~~l~~s~~~vS~HL~~ 54 (94)
T d1r1ua_ 13 KALGDYNRIRIMELL----SV-S--EASVGHISHQLNLSQSNVSHQLKL 54 (94)
T ss_dssp HHTCSHHHHHHHHHH----HH-C--CBCHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHH----HC-C--CCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 983899999999999----72-9--956999999988787789999999
No 85
>d1r1ta_ a.4.5.5 (A:) SmtB repressor {Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]}
Probab=76.37 E-value=0.82 Score=23.13 Aligned_cols=40 Identities=18% Similarity=0.443 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 87888999999999999874910354799999847785455402688
Q T0575 9 LPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 9 ~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
+++.+|-+|+..- . .| ..|+.+||+..|+|++++.+|.+-
T Consensus 20 L~~p~Rl~Il~~L----~-~~--~~~v~ela~~l~is~stvS~HL~~ 59 (98)
T d1r1ta_ 20 LADPNRLRLLSLL----A-RS--ELCVGDLAQAIGVSESAVSHQLRS 59 (98)
T ss_dssp HCCHHHHHHHHHH----T-TC--CBCHHHHHHHHTCCHHHHHHHHHH
T ss_pred HCCHHHHHHHHHH----H-CC--CCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 5899999999999----8-19--967999999989298899999999
No 86
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus pyogenes [TaxId: 1314]}
Probab=75.60 E-value=0.81 Score=23.16 Aligned_cols=32 Identities=16% Similarity=0.300 Sum_probs=25.6
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 99987491035479999984778545540268
Q T0575 23 DEFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 23 ~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
.+|.-+-+++.|..+||+..|+|.++++.+..
T Consensus 23 ~v~~L~y~~~ls~~EIA~~lgiS~~aV~~~l~ 54 (106)
T d1s7oa_ 23 NYIELYYADDYSLAEIADEFGVSRQAVYDNIK 54 (106)
T ss_dssp HHHHHHHHTCCCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 99898999199999999998969999999999
No 87
>d2fx0a2 a.121.1.1 (A:77-198) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=75.15 E-value=2.5 Score=19.31 Aligned_cols=81 Identities=19% Similarity=0.263 Sum_probs=61.5
Q ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 46899999999999998708089999999986164048999999999999999999999986488999999889999999
Q T0575 85 DMFAYLRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLN 164 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~ 164 (216)
+|.+.++.++..+..+...+|++..+...+....++.. +.++...-..++.+.+++.+|.++|.+.-. ..+.....+.
T Consensus 2 npl~alR~~lt~f~~hr~~~pElg~lay~EIi~~SsRL-e~IK~~~~~~~eqLr~iL~eg~eQgvfhF~-Svn~tv~~I~ 79 (122)
T d2fx0a2 2 NPINALREYLTVFTTHIKENPEIGTLAYEEIIKESARL-EKIKPYFIGSFEQLKEILQEGEKQGVFHFF-SINHTIHWIT 79 (122)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTTTHHHHHHHTTTCCTTH-HHHGGGTHHHHHHHHHHHHHHHHTTSCCCS-CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCEEEEE-EHHHHHHHHH
T ss_conf 86799999999999986338159999999999747157-653577732599999999987863826753-1147999988
Q ss_pred HHH
Q ss_conf 999
Q T0575 165 VVF 167 (216)
Q Consensus 165 ~~~ 167 (216)
+++
T Consensus 80 ~~v 82 (122)
T d2fx0a2 80 SIV 82 (122)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 998
No 88
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236 {Staphylococcus aureus, strain Mu50 / ATCC 700699 [TaxId: 1280]}
Probab=75.08 E-value=0.88 Score=22.90 Aligned_cols=36 Identities=8% Similarity=0.147 Sum_probs=26.7
Q ss_pred HHHHCCCCCCCHHHHHHHHCCCHHHHHCCC-CCHHHH
Q ss_conf 998749103547999998477854554026-888899
Q T0575 24 EFAQNDYDSVSINRITERAGIAKGSFYQYF-ADKKDC 59 (216)
Q Consensus 24 lf~~~G~~~~t~~~IA~~agvs~~tiY~~F-~sKe~L 59 (216)
+|.-+=+++.|..+||+..|+|+++++.+. ..+..|
T Consensus 26 vl~L~~~e~ls~~EIA~~lgiS~~aV~~~l~Ra~~~L 62 (106)
T d1xsva_ 26 YLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLV 62 (106)
T ss_dssp HHHHHHTSCCCHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 9999999087599999998959999999999999999
No 89
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=73.92 E-value=2.6 Score=19.30 Aligned_cols=39 Identities=15% Similarity=0.105 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCC
Q ss_conf 88999999999999874910354799999847785455402
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQY 52 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~ 52 (216)
++-+.-|.+-..+-.++| .+++.+||+..|||++|+-.-
T Consensus 5 ~s~EdYL~~I~~L~~~~~--~v~~~~iA~~L~vs~~SVt~m 43 (63)
T d2isya1 5 DTTEMYLRTIYDLEEEGV--TPLRARIAERLDQSGPTVSQT 43 (63)
T ss_dssp SHHHHHHHHHHHHHHTTC--CCCHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCC--CCCHHHHHHHHCCCCHHHHHH
T ss_conf 789999999999985589--770999999968994439999
No 90
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=73.69 E-value=2.1 Score=20.03 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCH-HHH
Q ss_conf 9999999999998749103547999998477854554026888-899
Q T0575 14 RSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADK-KDC 59 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sK-e~L 59 (216)
|..|...-.++..++| .|-.++|+.+||++++++.+..+| ...
T Consensus 4 ~~~l~~~i~~~r~~~g---ltq~elA~~~gv~~~~is~ie~g~~~~~ 47 (69)
T d2a6ca1 4 RSQLLIVLQEHLRNSG---LTQFKAAELLGVTQPRVSDLMRGKIDLF 47 (69)
T ss_dssp HHHHHHHHHHHHHTTT---CCHHHHHHHHTSCHHHHHHHHTTCGGGC
T ss_pred HHHHHHHHHHHHHHCC---CCHHHHHHHHHCCHHHHHHHHCCCCCCH
T ss_conf 9999999999999969---9999999998747847999976652010
No 91
>d2o3fa1 a.4.1.20 (A:1-83) Putative transcriptional regulator YbbH {Bacillus subtilis [TaxId: 1423]}
Probab=73.62 E-value=0.82 Score=23.12 Aligned_cols=35 Identities=11% Similarity=0.142 Sum_probs=26.0
Q ss_pred CCCCCCHHHHHHHHCCCHHHHHCC-----CCCHHHHHHHH
Q ss_conf 910354799999847785455402-----68888999999
Q T0575 29 DYDSVSINRITERAGIAKGSFYQY-----FADKKDCYLYL 63 (216)
Q Consensus 29 G~~~~t~~~IA~~agvs~~tiY~~-----F~sKe~L~~~~ 63 (216)
-+...|+++||+++|||++|+++. |.+=.++-.++
T Consensus 33 ~~~~~si~~lA~~~~vS~sTi~Rf~kklG~~gf~e~k~~l 72 (83)
T d2o3fa1 33 KAIESTVNEISALANSSDAAVIRLCKSLGLKGFQDLKMRV 72 (83)
T ss_dssp HHHTCCHHHHHHHTTCCHHHHHHHHHHTTCSSHHHHHHHH
T ss_pred HHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 9988319999999798998999999995899899999999
No 92
>d2oi8a2 a.121.1.1 (A:87-216) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=73.28 E-value=2.5 Score=19.40 Aligned_cols=88 Identities=8% Similarity=-0.011 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----------------C
Q ss_conf 999999999998708089999999986164048999999999999999999999986488999----------------9
Q T0575 90 LRWLLDVGIQFQFHNPRLAQIAYKALYDDVPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVP----------------D 153 (216)
Q Consensus 90 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~----------------~ 153 (216)
+..+...|.++...||..+++++...........+.. ..-......+.+.+..+...|.+.+ .
T Consensus 3 L~a~~~Ayr~wAl~~P~~Y~LmFg~~~p~~~~~~e~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 81 (130)
T d2oi8a2 3 LAGLAHALRAWALDDPQRYFLIFGTPVPGYRAPDDIT-EIAAETMAVIVDACAALPPSDGTDGAFDAHLDTHRQWAGDRP 81 (130)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHSSCCTTCCCCGGGT-TTTHHHHHHHHHHHCC-----CCCSHHHHHHHHSCCCC-CCC
T ss_pred HHHHHHHHHHHHHHCCHHEEHHCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 8999999999998590460333068998988973456-889999999999999750013578305667999998615678
Q ss_pred CCHHHH--HHHHHHHHHHHHHHHHHHC
Q ss_conf 998899--9999999999999999633
Q T0575 154 LDADTA--AFVLNVVFTELGNHLIERF 178 (216)
Q Consensus 154 ~~~~~~--~~~~~~~~~~~~~~~~~~~ 178 (216)
.|++.. +..+++.+.|+....+...
T Consensus 82 ~~~~~~~~a~~~Ws~lHGlvsLei~G~ 108 (130)
T d2oi8a2 82 APSSALHRALSFWSRLHGVLSLELAGQ 108 (130)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 998999999999999998999998078
No 93
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=71.92 E-value=1.2 Score=21.92 Aligned_cols=30 Identities=7% Similarity=0.007 Sum_probs=23.5
Q ss_pred HHHHCCCCCCCHHHHHHHHCCCHHHHHCCC
Q ss_conf 998749103547999998477854554026
Q T0575 24 EFAQNDYDSVSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 24 lf~~~G~~~~t~~~IA~~agvs~~tiY~~F 53 (216)
+|.-.=+.+.|..+||+..|+|.+++..+.
T Consensus 29 v~~l~~~~~~s~~eIA~~lgis~~tv~~~~ 58 (71)
T d1rp3a2 29 VIQLIFYEELPAKEVAKILETSVSRVSQLK 58 (71)
T ss_dssp HHHHHHTSCCCHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHCCCHHHHHHHH
T ss_conf 999998684899999999798999999999
No 94
>d2o38a1 a.35.1.13 (A:28-116) Hypothetical protein RPA3824 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=71.05 E-value=3.1 Score=18.62 Aligned_cols=42 Identities=19% Similarity=0.128 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 889999999999998749103547999998477854554026888
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
+-|..|-..-.++..++|+ |.+++|+.+|+|+.++.++-.+|
T Consensus 7 ~~k~~l~~~i~~~r~~~gl---tq~~lA~~~gis~~~is~ie~G~ 48 (89)
T d2o38a1 7 QTKLRLAYALNAVIDRARL---SQAAAAARLGINQPKVSALRNYK 48 (89)
T ss_dssp HHHHHHHHHHHHHHHHTTC---CHHHHHHHHTCCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999999599---99999999973370899998499
No 95
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=70.58 E-value=2 Score=20.17 Aligned_cols=29 Identities=3% Similarity=0.109 Sum_probs=22.7
Q ss_pred HHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 9987491035479999984778545540268
Q T0575 24 EFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 24 lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
.+.++| ..|+.+||+.+|++++++|....
T Consensus 28 ~L~~~g--~~t~~eia~~~~i~~~~v~~~l~ 56 (109)
T d1sfxa_ 28 LLLERG--GMRVSEIARELDLSARFVRDRLK 56 (109)
T ss_dssp HHHHHC--CBCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHCC--CCCHHHHHHHHCCCCCHHHHHHH
T ss_conf 988238--99899999985798355999999
No 96
>d3c07a2 a.121.1.1 (A:90-235) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=70.28 E-value=3.2 Score=18.50 Aligned_cols=97 Identities=14% Similarity=-0.009 Sum_probs=61.4
Q ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHH
Q ss_conf 4689999999999999870808999999998616-4048999999999999999999999986488999999-8899999
Q T0575 85 DMFAYLRWLLDVGIQFQFHNPRLAQIAYKALYDD-VPLPAETMQVIRHGSFAYFKQLVEQGIADGSLVPDLD-ADTAAFV 162 (216)
Q Consensus 85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~-~~~~~~~ 162 (216)
+..+++..++..+++....|..+....+...... .+. ..+........+...++++++++.+..+...+ .......
T Consensus 2 Dl~~RL~~~l~t~Ldvl~pyr~F~~~~l~~a~~P~~pl--spfs~es~~aR~~a~~l~~e~i~~~~~~~~~~l~~~lp~l 79 (146)
T d3c07a2 2 DLEARLAGVLKVWLDIATPYHEFAVQFFKNAADPDSPL--SPFSPESEHARVEAIGIHRAVLAGAKTKVPEELRDILPEL 79 (146)
T ss_dssp SHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHTCTTSTT--STTSGGGHHHHHHHHHHHHHHHHTSSSCCCGGGTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 68999999999999983341899999998606988888--8888234899999999999998337877776789888899
Q ss_pred HHHHHHHHHHHHHHHCCCCHH
Q ss_conf 999999999999963389907
Q T0575 163 LNVVFTELGNHLIERFAVNPA 183 (216)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~ 183 (216)
++....++..+|+.......+
T Consensus 80 ~W~~~l~il~fW~~D~S~~~e 100 (146)
T d3c07a2 80 MWLSQMGLVLYWIFDRTEGRE 100 (146)
T ss_dssp HHHHHHHHHHHHHHCCSTTSH
T ss_pred HHHHHHHHHHHHHCCCCCCHH
T ss_conf 999999999999648980067
No 97
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.59 E-value=3.3 Score=18.40 Aligned_cols=56 Identities=16% Similarity=0.232 Sum_probs=38.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHH
Q ss_conf 988866788788899999999999987491035479999984778545540268888999999
Q T0575 1 MPTETFFNLPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYL 63 (216)
Q Consensus 1 Mp~~~~~~~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~ 63 (216)
|+++.. .++-+-|-+|+.. .+.| ...+-.+||+.-||++.|+-.--++|+.++...
T Consensus 1 m~~kRk-~LT~~eK~~ii~~-----~e~g-~k~sq~eIA~~fGv~~STvs~IlKnK~kil~~~ 56 (66)
T d1hlva1 1 MGPKRR-QLTFREKSRIIQE-----VEEN-PDLRKGEIARRFNIPPSTLSTILKNKRAILASE 56 (66)
T ss_dssp CCCSSC-CCCHHHHHHHHHH-----HHHC-TTSCHHHHHHHHTCCHHHHHHHHHTHHHHHHHH
T ss_pred CCCCCC-CCCHHHHHHHHHH-----HHCC-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 996323-3779999999999-----9808-721099999995997647999998799999889
No 98
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=68.74 E-value=2.4 Score=19.54 Aligned_cols=31 Identities=10% Similarity=0.272 Sum_probs=24.2
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 999874910354799999847785455402688
Q T0575 23 DEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 23 ~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
.++.++| ..|..+||++.|+|..+++++...
T Consensus 10 ~~L~~n~--r~s~~~lA~~~gls~~~v~~Ri~~ 40 (60)
T d1i1ga1 10 EILEKDA--RTPFTEIAKKLGISETAVRKRVKA 40 (60)
T ss_dssp HHHHHCT--TCCHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHCC--CCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 9998849--999999999989299999999999
No 99
>d2v4jc1 d.203.1.1 (C:3-105) DsrC, the gamma subunit of dissimilatory sulfite reductase {Desulfovibrio vulgaris [TaxId: 881]}
Probab=68.73 E-value=3.5 Score=18.27 Aligned_cols=46 Identities=17% Similarity=0.384 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 88999999999999874910354799999847785455402688889
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
+.-=.||+.+.+-+.++|.. =+++.+++..|.+.+.+|.-||+.-.
T Consensus 42 ~~HW~vI~~lR~~y~~~~~~-P~~R~l~K~~~~~~k~L~~LFp~~Pa 87 (103)
T d2v4jc1 42 PDHQKIIDFLQDYYKKNGIA-PMVRILSKNTGFKLKEVYELFPSGPG 87 (103)
T ss_dssp HHHHHHHHHHHHHHHHHSSC-CCHHHHHHHHCCCHHHHHHHSTTHHH
T ss_pred HHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHCHHHHHHHHHCCCCHH
T ss_conf 99999999999999996899-70999999856027699997699889
No 100
>d1a04a1 a.4.6.2 (A:150-216) Nitrate/nitrite response regulator (NarL) {Escherichia coli [TaxId: 562]}
Probab=68.52 E-value=1.4 Score=21.27 Aligned_cols=25 Identities=12% Similarity=0.142 Sum_probs=21.2
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 0354799999847785455402688
Q T0575 31 DSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
++.|..+||+..|+|..|+.+|..+
T Consensus 20 ~G~s~~eIA~~l~iS~~TV~~~~~~ 44 (67)
T d1a04a1 20 QGLPNKMIARRLDITESTVKVHVKH 44 (67)
T ss_dssp TTCCHHHHHHHHTCCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 6799899999978888899999999
No 101
>d1xs9a_ i.11.1.1 (A:) Ternary complex formed between MarA, the alpha-CTD of RNA polymerase and DNA {Escherichia coli [TaxId: 562]}
Probab=68.00 E-value=0.46 Score=25.06 Aligned_cols=47 Identities=21% Similarity=0.334 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHH
Q ss_conf 89999999999998749103547999998477854554026888899
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDC 59 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L 59 (216)
+....++.+.+.+.++=-...|+.+||+.+|+|+.++.+.|...-++
T Consensus 8 ~~~~~i~~v~~~i~~~~~~~~~l~~la~~~~~s~~~l~r~Fk~~~g~ 54 (129)
T d1xs9a_ 8 TDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGH 54 (129)
T ss_dssp HHHHTTTTTHHHHHTTSSSSCCCTTTGGGGSSCHHHHHHHHHTTTSS
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 63689999999998600589998899988689999999999998566
No 102
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=67.53 E-value=3 Score=18.73 Aligned_cols=30 Identities=3% Similarity=0.093 Sum_probs=23.0
Q ss_pred HHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 99874910354799999847785455402688
Q T0575 24 EFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 24 lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
+...+| .+|+.+||+..|++++++.++-..
T Consensus 30 L~~~~~--~~t~~eLa~~~~i~~~tvs~~l~~ 59 (109)
T d2d1ha1 30 MVEIEK--PITSEELADIFKLSKTTVENSLKK 59 (109)
T ss_dssp HHHHCS--CEEHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHCCC--CCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 997698--988999999988567699999999
No 103
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=66.68 E-value=1.8 Score=20.52 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=26.8
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCC
Q ss_conf 999998749103547999998477854554026
Q T0575 21 LLDEFAQNDYDSVSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 21 A~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F 53 (216)
-.++|.-+=+++.|..+||+..|+|.+|+..+.
T Consensus 23 ~r~v~~l~~~~~~s~~eIA~~lgis~~tv~~~l 55 (68)
T d1or7a1 23 LRMAITLRELDGLSYEEIAAIMDCPVGTVRSRI 55 (68)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
T ss_conf 999999999909899999999894999999999
No 104
>d1u2wa1 a.4.5.5 (A:12-119) Cadmium efflux system accessory protein CadC {Staphylococcus aureus [TaxId: 1280]}
Probab=66.53 E-value=2.2 Score=19.84 Aligned_cols=40 Identities=15% Similarity=0.344 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 8788899999999999987491035479999984778545540268
Q T0575 9 LPEEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 9 ~~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
+++.+|-+|+..- ...| ..|+.+||+..|+|.+++.+|.+
T Consensus 28 Ladp~Rl~Il~~L----~~~~--~~~v~ela~~l~~s~s~vS~HL~ 67 (108)
T d1u2wa1 28 IADENRAKITYAL----CQDE--ELCVCDIANILGVTIANASHHLR 67 (108)
T ss_dssp HHSHHHHHHHHHH----HHSS--CEEHHHHHHHHTCCHHHHHHHHH
T ss_pred HCCHHHHHHHHHH----HHCC--CCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 4899999999999----8689--91499999888557257999999
No 105
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=66.45 E-value=2 Score=20.14 Aligned_cols=38 Identities=8% Similarity=0.205 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 88999999999999874910354799999847785455402688
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
+.-.+||++ +.++| .+|..+||+..|+|+.+++++...
T Consensus 5 ~~D~~IL~~----L~~n~--r~s~~~iA~~lgis~~tv~~Ri~~ 42 (63)
T d2cfxa1 5 QIDLNIIEE----LKKDS--RLSMRELGRKIKLSPPSVTERVRQ 42 (63)
T ss_dssp HHHHHHHHH----HHHCS--CCCHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHCC--CCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 999999999----99839--999999999989687899999999
No 106
>d2pg4a1 a.4.5.48 (A:1-92) Uncharacterized protein APE0880.1 {Aeropyrum pernix [TaxId: 56636]}
Probab=65.55 E-value=2.7 Score=19.17 Aligned_cols=43 Identities=23% Similarity=0.447 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHH
Q ss_conf 99999999998749103547999998477854554026888899999
Q T0575 16 RLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLY 62 (216)
Q Consensus 16 ~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~ 62 (216)
+|+- ..--|.++||+ -|+.+|.+..|||..||+- +-|+-|+.+
T Consensus 15 rilp-tllefekkgye-pslaeivkasgvsektffm--glkdrlira 57 (92)
T d2pg4a1 15 RILP-TLLEFEKKGYE-PSLAEIVKASGVSEKTFFM--GLKDRLIRA 57 (92)
T ss_dssp HHHH-HHHHHHHTTCC-CCHHHHHHHHCCCHHHHHT--THHHHHHHT
T ss_pred HHHH-HHHHHHHCCCC-CCHHHHHHHCCCCHHHHHH--HHHHHHHHH
T ss_conf 9988-99999862688-3199999872853667754--438899995
No 107
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=65.42 E-value=1.5 Score=21.12 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 03547999998477854554026888
Q T0575 31 DSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
.+.|..++|+.+|+|+++++++-.++
T Consensus 13 ~gltq~~la~~~gis~~~i~~~E~g~ 38 (68)
T d1b0na2 13 KGYSLSELAEKAGVAKSYLSSIERNL 38 (68)
T ss_dssp TTCCHHHHHHHHTCCHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHCCC
T ss_conf 29999999989797999999998599
No 108
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=65.27 E-value=1.8 Score=20.44 Aligned_cols=25 Identities=8% Similarity=0.114 Sum_probs=21.4
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 0354799999847785455402688
Q T0575 31 DSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
++.|..+||++.|+|..|+..|..+
T Consensus 18 ~G~s~~eIA~~L~is~~TV~~~~~~ 42 (67)
T d1fsea_ 18 QDKTTKEIASELFISEKTVRNHISN 42 (67)
T ss_dssp TTCCHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 3698999999988888899999999
No 109
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=65.18 E-value=1.7 Score=20.68 Aligned_cols=21 Identities=14% Similarity=0.382 Sum_probs=18.4
Q ss_pred CCHHHHHHHHCCCHHHHHCCC
Q ss_conf 547999998477854554026
Q T0575 33 VSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 33 ~t~~~IA~~agvs~~tiY~~F 53 (216)
-|+.++|+.+|||+.|+.+|=
T Consensus 3 ytI~e~A~~~gvs~~tlR~Ye 23 (109)
T d1r8da_ 3 YQVKQVAEISGVSIRTLHHYD 23 (109)
T ss_dssp BCHHHHHHHHSCCHHHHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHH
T ss_conf 229999999896999999998
No 110
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=65.12 E-value=1.9 Score=20.26 Aligned_cols=40 Identities=8% Similarity=0.033 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHH
Q ss_conf 9999999998749103547999998477854554026888899
Q T0575 17 LIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDC 59 (216)
Q Consensus 17 Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L 59 (216)
|-+.-.++-.++| .|..++|+.+|+|+++++++-.++...
T Consensus 10 ~g~~ik~~R~~~g---ltq~~lA~~~gis~~~i~~~E~g~~~p 49 (69)
T d1y7ya1 10 FGQRLRELRTAKG---LSQETLAFLSGLDRSYVGGVERGQRNV 49 (69)
T ss_dssp HHHHHHHHHHHTT---CCHHHHHHHHTCCHHHHHHHHTTCSCC
T ss_pred HHHHHHHHHHHCC---CCHHHHHHHHCCCHHHHHHHHCCCCCC
T ss_conf 9999999999839---999999868299898999998799999
No 111
>d2auwa1 a.35.1.10 (A:88-154) Hypothetical protein NE0471 C-terminal domain {Nitrosomonas europaea [TaxId: 915]}
Probab=65.03 E-value=1.8 Score=20.43 Aligned_cols=28 Identities=21% Similarity=0.301 Sum_probs=23.7
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 0354799999847785455402688889
Q T0575 31 DSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
.+.|-.++|+..|||+.|+.+|=.++..
T Consensus 13 ~gltQ~elA~~LGvs~~ti~~yE~G~r~ 40 (67)
T d2auwa1 13 NNLSLTTAAEALGISRRMVSYYRTAHKI 40 (67)
T ss_dssp TTCCHHHHHHHHTSCHHHHHHHHTTSSC
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHCCCCC
T ss_conf 5999999999959989999999869999
No 112
>d1r71a_ a.4.14.1 (A:) Transcriptional repressor protein KorB DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=64.36 E-value=3.3 Score=18.43 Aligned_cols=31 Identities=10% Similarity=0.059 Sum_probs=23.7
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 9999987491035479999984778545540268
Q T0575 21 LLDEFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 21 A~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
|++-+.+.|+ |..+||+..|.|++++.+|-.
T Consensus 22 a~~~l~~~g~---s~~eiA~~~G~s~~~V~~~l~ 52 (114)
T d1r71a_ 22 FIGRELAKGK---KKGDIAKEIGKSPAFITQHVT 52 (114)
T ss_dssp HHHHHHHTTC---CHHHHHHHHTCCHHHHHHHHG
T ss_pred HHHHHHHHCC---CHHHHHHHHCCCHHHHHHHHH
T ss_conf 9999988099---899999997772999999999
No 113
>d1l3la1 a.4.6.2 (A:170-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=64.09 E-value=2 Score=20.19 Aligned_cols=25 Identities=12% Similarity=0.202 Sum_probs=21.7
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 0354799999847785455402688
Q T0575 31 DSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
++.|..+||++.|+|..|+.+|..+
T Consensus 18 ~G~s~~eIA~~l~iS~~TV~~~~~~ 42 (65)
T d1l3la1 18 VGKTMEEIADVEGVKYNSVRVKLRE 42 (65)
T ss_dssp TTCCHHHHHHHHTCCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 3698889999978889999999999
No 114
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=63.43 E-value=3.5 Score=18.25 Aligned_cols=37 Identities=5% Similarity=0.178 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 8999999999999874910354799999847785455402688
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
.-.+||. ++.++ ...|..+||+..|+|..+++++...
T Consensus 6 ~D~~IL~----~L~~~--~r~s~~eiA~~l~ls~~~v~~Ri~r 42 (63)
T d2cg4a1 6 LDRGILE----ALMGN--ARTAYAELAKQFGVSPETIHVRVEK 42 (63)
T ss_dssp HHHHHHH----HHHHC--TTSCHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHH----HHHHC--CCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 9999999----99983--8999999999989399999999999
No 115
>d1r69a_ a.35.1.2 (A:) 434 C1 repressor, DNA-binding domain {Bacteriophage 434 [TaxId: 10712]}
Probab=63.15 E-value=1.8 Score=20.47 Aligned_cols=27 Identities=15% Similarity=0.183 Sum_probs=23.3
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 035479999984778545540268888
Q T0575 31 DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
.+.|..++|+.+|||++++++|-.+|.
T Consensus 13 ~g~sq~elA~~~gvs~~~is~~E~g~~ 39 (63)
T d1r69a_ 13 LGLNQAELAQKVGTTQQSIEQLENGKT 39 (63)
T ss_dssp TTCCHHHHHHHHTSCHHHHHHHHTTSC
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 499699999983739999999878989
No 116
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=62.79 E-value=2.1 Score=19.90 Aligned_cols=24 Identities=17% Similarity=0.081 Sum_probs=20.5
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 035479999984778545540268
Q T0575 31 DSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
.+.|..+||...|+|..|+..|..
T Consensus 26 ~G~s~~eIA~~l~iS~~TV~~~~~ 49 (70)
T d1yioa1 26 RGLMNKQIAGELGIAEVTVKVHRH 49 (70)
T ss_dssp TTCCHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 289999999897979999999999
No 117
>d1bl0a2 a.4.1.8 (A:63-124) MarA {Escherichia coli [TaxId: 562]}
Probab=62.52 E-value=3.3 Score=18.45 Aligned_cols=38 Identities=16% Similarity=0.309 Sum_probs=27.3
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHCC-CHHHHHCCCCCHHH
Q ss_conf 999999998749103547999998477-85455402688889
Q T0575 18 IDVLLDEFAQNDYDSVSINRITERAGI-AKGSFYQYFADKKD 58 (216)
Q Consensus 18 l~aA~~lf~~~G~~~~t~~~IA~~agv-s~~tiY~~F~sKe~ 58 (216)
++.|.+++.+. ..||.+||..+|. +...|++.|+..-+
T Consensus 3 l~~a~~lL~~t---~~~i~~IA~~~Gf~~~~~F~r~Fk~~~g 41 (62)
T d1bl0a2 3 MTEIAQKLKES---NEPILYLAERYGFESQQTLTRTFKNYFD 41 (62)
T ss_dssp HHHHHHHHHHC---CCCHHHHHHHTTCSCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCC---CCCHHHHHHHHCCCCHHHHHHHHHHHHC
T ss_conf 99999998836---9999999999879988999999998889
No 118
>d1vz0a1 a.4.14.1 (A:116-208) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=62.33 E-value=3.8 Score=17.97 Aligned_cols=29 Identities=10% Similarity=0.264 Sum_probs=22.3
Q ss_pred HHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCC
Q ss_conf 99998749103547999998477854554026
Q T0575 22 LDEFAQNDYDSVSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 22 ~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F 53 (216)
.+-+.+.| .|..+||+..|.|+++++++-
T Consensus 12 ~~~L~e~g---~t~~~iA~~~Gks~~~V~~~L 40 (93)
T d1vz0a1 12 YQALLEMG---LTQEEVARRVGKARSTVANAL 40 (93)
T ss_dssp HHHHHHTT---CCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHCC---CCHHHHHHHHCCCHHHHHHHH
T ss_conf 99999849---999999999851469999999
No 119
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=62.17 E-value=4.2 Score=17.63 Aligned_cols=24 Identities=13% Similarity=0.090 Sum_probs=15.0
Q ss_pred HHCCCCCCCHHHHHHHHCCCHHHHHC
Q ss_conf 87491035479999984778545540
Q T0575 26 AQNDYDSVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 26 ~~~G~~~~t~~~IA~~agvs~~tiY~ 51 (216)
.++| ++|..+||+..|++++++.+
T Consensus 40 ~~~~--~~t~~~la~~l~i~~~tvs~ 63 (139)
T d2a61a1 40 YFEG--PKRPGELSVLLGVAKSTVTG 63 (139)
T ss_dssp HHHC--CBCHHHHHHHHTCCHHHHHH
T ss_pred HHCC--CCCHHHHHHHHCCCCCCCHH
T ss_conf 9769--98999999983988144269
No 120
>d2ppxa1 a.35.1.3 (A:30-91) Uncharacterized protein Atu1735 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=61.66 E-value=2.3 Score=19.70 Aligned_cols=26 Identities=12% Similarity=0.215 Sum_probs=21.6
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 03547999998477854554026888
Q T0575 31 DSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
.+.|-.++|+..|||.+|+.+|=.++
T Consensus 11 ~gltQ~elA~~lGvs~~tvs~~E~G~ 36 (62)
T d2ppxa1 11 LKLTQEEFSARYHIPLGTLRDWEQGR 36 (62)
T ss_dssp TTCCHHHHHHHHTCCHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHCCC
T ss_conf 69999999999698999999887798
No 121
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=61.59 E-value=0.98 Score=22.53 Aligned_cols=29 Identities=7% Similarity=0.093 Sum_probs=23.6
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCCHHHH
Q ss_conf 03547999998477854554026888899
Q T0575 31 DSVSINRITERAGIAKGSFYQYFADKKDC 59 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~sKe~L 59 (216)
.+.|..++|+.+|||.+++.++-.++...
T Consensus 13 ~g~tq~elA~~~gis~~~is~~e~g~~~p 41 (66)
T d1utxa_ 13 KKISQSELAALLEVSRQTINGIEKNKYNP 41 (66)
T ss_dssp TTCCHHHHHHHHTSCHHHHHHHHTTSCCC
T ss_pred CCCCHHHHHHHCCCCHHHHHHHHCCCCCC
T ss_conf 59999999886355798999998699899
No 122
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=61.28 E-value=0.97 Score=22.57 Aligned_cols=38 Identities=5% Similarity=0.009 Sum_probs=27.7
Q ss_pred HHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH
Q ss_conf 99874910354799999847785455402688889999999
Q T0575 24 EFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLI 64 (216)
Q Consensus 24 lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~ 64 (216)
+-.++| .|..++|+.+|+|+++++++-.++...-...+
T Consensus 11 ~R~~~g---~tq~~lA~~~gvs~~~i~~~e~g~~~p~~~~l 48 (66)
T d2r1jl1 11 RRKKLK---IRQAALGKMVGVSNVAISQWERSETEPNGENL 48 (66)
T ss_dssp HHHHHT---CCHHHHHHHHTSCHHHHHHHHTTSSCCBHHHH
T ss_pred HHHHCC---CCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH
T ss_conf 999859---99999999979899999999869989999999
No 123
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=60.08 E-value=2.5 Score=19.44 Aligned_cols=20 Identities=15% Similarity=0.413 Sum_probs=17.6
Q ss_pred CCHHHHHHHHCCCHHHHHCC
Q ss_conf 54799999847785455402
Q T0575 33 VSINRITERAGIAKGSFYQY 52 (216)
Q Consensus 33 ~t~~~IA~~agvs~~tiY~~ 52 (216)
.++.++|+.+|||..|+-+|
T Consensus 1 m~Ige~A~~~gvs~~TlR~Y 20 (127)
T d1q06a_ 1 MNISDVAKITGLTSKAIRFY 20 (127)
T ss_dssp CCHHHHHHHHTCCHHHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHH
T ss_conf 97899999989299999999
No 124
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=60.07 E-value=2.1 Score=19.93 Aligned_cols=31 Identities=13% Similarity=0.112 Sum_probs=24.2
Q ss_pred HHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 9987491035479999984778545540268888
Q T0575 24 EFAQNDYDSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 24 lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
+-.+.| .|-.++|+.+|||++++.+|-.++.
T Consensus 11 ~R~~~g---ltq~~lA~~~gvs~~ti~~~E~g~~ 41 (65)
T d2croa_ 11 RRIALK---MTQTELATKAGVKQQSIQLIEAGVT 41 (65)
T ss_dssp HHHHTT---CCHHHHHHHHTSCHHHHHHHHTTCC
T ss_pred HHHHCC---CCHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 999849---9999999997867949998787799
No 125
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=59.97 E-value=3.6 Score=18.12 Aligned_cols=38 Identities=8% Similarity=0.079 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 88999999999999874910354799999847785455402688
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
.+|-+|+. .+.++| ..|+.+||+..|++++++++|.+.
T Consensus 16 p~r~~IL~----~L~~~~--~~~~~eLa~~l~is~~~vs~~l~~ 53 (100)
T d1ub9a_ 16 PVRLGIMI----FLLPRR--KAPFSQIQKVLDLTPGNLDSHIRV 53 (100)
T ss_dssp HHHHHHHH----HHHHHS--EEEHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHH----HHCCCC--CEEHHHHHHHHHHCCCCCCHHHHH
T ss_conf 99999998----760479--901999999986254323099998
No 126
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=59.69 E-value=4.3 Score=17.56 Aligned_cols=31 Identities=10% Similarity=0.282 Sum_probs=23.8
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 999874910354799999847785455402688
Q T0575 23 DEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 23 ~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
.++.++ ..+|..+||++.|+|.+++++....
T Consensus 10 ~~L~~n--~r~s~~eiA~~l~ls~~~v~~Ri~~ 40 (60)
T d2cyya1 10 KILQND--GKAPLREISKITGLAESTIHERIRK 40 (60)
T ss_dssp HHHHHC--TTCCHHHHHHHHCSCHHHHHHHHHH
T ss_pred HHHHHC--CCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 999982--8999999999989399999999999
No 127
>d1r71a_ a.4.14.1 (A:) Transcriptional repressor protein KorB DNA-binding domain {Escherichia coli [TaxId: 562]} SCOP: d1r71b_ d1r71d_ d1r71c_
Probab=59.67 E-value=4.9 Score=17.12 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=23.2
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 99999987491035479999984778545540268
Q T0575 20 VLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 20 aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
+..++ ...|+ |..+||+..|.|++.+.++..
T Consensus 22 a~~rl-~~~g~---t~~eiA~~lGks~s~Vs~~l~ 52 (114)
T d1r71a_ 22 FIGRE-LAKGK---KKGDIAKEIGKSPAFITQHVT 52 (114)
T ss_dssp HHHHH-HHTTC---CHHHHHHHHTCCHHHHHHHHG
T ss_pred HHHHH-HHHCC---CHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999-88416---888999998413899999998
No 128
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=59.02 E-value=2.4 Score=19.56 Aligned_cols=21 Identities=19% Similarity=0.259 Sum_probs=18.1
Q ss_pred CCHHHHHHHHCCCHHHHHCCC
Q ss_conf 547999998477854554026
Q T0575 33 VSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 33 ~t~~~IA~~agvs~~tiY~~F 53 (216)
-|+.++|+.+|||+.|+-+|=
T Consensus 4 ytI~evA~~~gvs~~tlR~Ye 24 (118)
T d1r8ea1 4 YSIGEVSKLANVSIKALRYYD 24 (118)
T ss_dssp EEHHHHHHHHTCCHHHHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHH
T ss_conf 019999999896999999999
No 129
>d1g2ha_ a.4.1.12 (A:) Transcriptional regulator TyrR, C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=58.91 E-value=5.1 Score=16.98 Aligned_cols=35 Identities=9% Similarity=0.253 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCC
Q ss_conf 888999999999999874910354799999847785455402
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQY 52 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~ 52 (216)
++--..+|..|++ +.| ++...|+..|||+.|+|+-
T Consensus 19 ~~~Er~~I~~aL~---~~g----n~~~aA~~Lgisr~tL~rK 53 (61)
T d1g2ha_ 19 GFYEAQVLKLFYA---EYP----STRKLAQRLGVSHTAIANK 53 (61)
T ss_dssp SHHHHHHHHHHHH---HSC----SHHHHHHHTTSCTHHHHHH
T ss_pred HHHHHHHHHHHHH---HCC----CHHHHHHHHCCCHHHHHHH
T ss_conf 9999999999999---878----9999999979889999999
No 130
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=57.59 E-value=5 Score=17.03 Aligned_cols=29 Identities=10% Similarity=0.362 Sum_probs=25.0
Q ss_pred CCCCCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 49103547999998477854554026888
Q T0575 28 NDYDSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 28 ~G~~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
..-+...+.++|++.|+++..|-..|.|+
T Consensus 44 ~~p~~~~~~~la~~~gl~~~~i~vWFqN~ 72 (80)
T d1wh7a_ 44 QKHDDVAVEQFCAETGVRRQVLKIWMHNN 72 (80)
T ss_dssp CSSTTHHHHHHHHHSCCCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHCCCHHHEEEECCCC
T ss_conf 69699999999999788988951003037
No 131
>d1lmb3_ a.35.1.2 (3:) lambda C1 repressor, DNA-binding domain {Bacteriophage lambda [TaxId: 10710]}
Probab=57.51 E-value=2.3 Score=19.61 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=26.8
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH
Q ss_conf 0354799999847785455402688889999999
Q T0575 31 DSVSINRITERAGIAKGSFYQYFADKKDCYLYLI 64 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~ 64 (216)
.+.|..++|+.+|+|.+++.+|=.++..+=...+
T Consensus 24 ~gltq~~lA~~lgis~~~is~~E~g~~~~s~~~l 57 (87)
T d1lmb3_ 24 LGLSQESVADKMGMGQSGVGALFNGINALNAYNA 57 (87)
T ss_dssp HTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH
T ss_conf 3999999998867228889999811478759999
No 132
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=56.79 E-value=5.5 Score=16.73 Aligned_cols=32 Identities=19% Similarity=0.117 Sum_probs=25.3
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCC
Q ss_conf 9999998749103547999998477854554026
Q T0575 20 VLLDEFAQNDYDSVSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 20 aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F 53 (216)
.-++++.++| .+|-.+||+..|+|++|+.++-
T Consensus 9 ~Il~~i~~~g--~~sr~eLa~~~gLS~~Tvs~iv 40 (70)
T d1z6ra1 9 AVYRLIDQLG--PVSRIDLSRLAQLAPASITKIV 40 (70)
T ss_dssp HHHHHHHSSC--SCCHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHCC--CCCHHHHHHHHCCCHHHHHHHH
T ss_conf 9999999949--9289999999894999999999
No 133
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=56.71 E-value=5.5 Score=16.72 Aligned_cols=37 Identities=11% Similarity=0.297 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH
Q ss_conf 8999999999999874910354799999847785455
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSF 49 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~ti 49 (216)
..+.+.+.-..+|.+.||.--++++||+..|++...+
T Consensus 4 ~q~~l~~~I~~~~~~~g~~PP~vrdl~~~l~~~e~~~ 40 (64)
T d1lvaa3 4 TQKKLLKDLEDKYRVSRWQPPSFKEVAGSFNLDPSEL 40 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCBHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH
T ss_conf 9999999999999986999995999998919999999
No 134
>d1x57a1 a.35.1.12 (A:8-85) Endothelial differentiation-related factor 1, EDF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.02 E-value=3.5 Score=18.22 Aligned_cols=28 Identities=4% Similarity=0.074 Sum_probs=22.6
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 0354799999847785455402688889
Q T0575 31 DSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
.+.|..++|+.+|||.+++.++=.++..
T Consensus 18 ~gltq~~lA~~~gis~~~is~~E~G~~~ 45 (78)
T d1x57a1 18 KGLTQKDLATKINEKPQVIADYESGRAI 45 (78)
T ss_dssp TTCCHHHHHHHHTSCHHHHHHHHHTCSC
T ss_pred CCCCHHHHHHCCCCCHHHHHHHHCCCCC
T ss_conf 5997267887188789999999806779
No 135
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=54.72 E-value=1.6 Score=20.83 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 9999999998749103547999998477854554026888
Q T0575 17 LIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 17 Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
-+-.-++.+. +| .|+.++|+.+|+|++++-.+=.++
T Consensus 14 ~lG~~ir~~R-~~---~t~~eLA~~~Gvs~~~ls~iE~G~ 49 (82)
T d2ofya1 14 RLGELLRSAR-GD---MSMVTVAFDAGISVETLRKIETGR 49 (82)
T ss_dssp HHHHHHHHHH-TT---SCHHHHHHHHTCCHHHHHHHHTTC
T ss_pred HHHHHHHHHH-HC---CCHHHHHHHHCCCHHHHHHHHCCC
T ss_conf 9999999999-80---799999989717999999998298
No 136
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=53.62 E-value=6.1 Score=16.36 Aligned_cols=14 Identities=14% Similarity=0.207 Sum_probs=4.4
Q ss_pred HHHHHHHHCCCHHH
Q ss_conf 79999984778545
Q T0575 35 INRITERAGIAKGS 48 (216)
Q Consensus 35 ~~~IA~~agvs~~t 48 (216)
..+||+.+|+|..|
T Consensus 63 ~~eIa~~~~vs~~t 76 (95)
T d1aisb2 63 QREVAEVARVTEVT 76 (95)
T ss_dssp HHHHHHHHTCCHHH
T ss_pred HHHHHHHHCCCHHH
T ss_conf 99999998988999
No 137
>d1ji8a_ d.203.1.1 (A:) DsrC, the gamma subunit of dissimilatory sulfite reductase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=53.25 E-value=2 Score=20.15 Aligned_cols=45 Identities=20% Similarity=0.334 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 8899999999999987491035479999984778545540268888
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
+.--.||+...+-+.++|. .-+++.+++..|.+.+.+|.-|++.-
T Consensus 50 e~HW~iI~~lR~~y~e~~~-~P~~R~l~k~~~~~~~~L~~LFP~gP 94 (111)
T d1ji8a_ 50 EEHWKLVKYLREYWETFGT-CPPIKMVTKETGFSLEKIYQLFPSGP 94 (111)
T ss_dssp HHHHHHHHHHHHHTTTTSC-CCCSTTGGGGSCCCHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHCCCHHHHHHHCCCCH
T ss_conf 7899999999999987089-98367999983657668885528876
No 138
>d1umqa_ a.4.1.12 (A:) Photosynthetic apparatus regulatory protein PprA (RegA), DNA-binding domain {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=52.51 E-value=6.4 Score=16.24 Aligned_cols=24 Identities=8% Similarity=0.220 Sum_probs=19.0
Q ss_pred HHCCCCCCCHHHHHHHHCCCHHHHHCC
Q ss_conf 874910354799999847785455402
Q T0575 26 AQNDYDSVSINRITERAGIAKGSFYQY 52 (216)
Q Consensus 26 ~~~G~~~~t~~~IA~~agvs~~tiY~~ 52 (216)
.+.|. .+.+-|+..|||+.|+|+.
T Consensus 30 ~~~~g---n~~~aA~~LGIsR~TL~rk 53 (60)
T d1umqa_ 30 EMCDR---NVSETARRLNMHRRTLQRI 53 (60)
T ss_dssp HHTTS---CHHHHHHHHTSCHHHHHHH
T ss_pred HHHCC---CHHHHHHHHCCCHHHHHHH
T ss_conf 99668---5999999989889999999
No 139
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=52.46 E-value=6.4 Score=16.23 Aligned_cols=29 Identities=14% Similarity=0.127 Sum_probs=18.8
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCHHHHHC
Q ss_conf 99987491035479999984778545540
Q T0575 23 DEFAQNDYDSVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 23 ~lf~~~G~~~~t~~~IA~~agvs~~tiY~ 51 (216)
..+..++-..+|..+||+..|++++++..
T Consensus 36 ~~l~~~~~~~it~~ela~~~~~~~~~vs~ 64 (135)
T d3broa1 36 DYLSRNKNKEVLQRDLESEFSIKSSTATV 64 (135)
T ss_dssp HHHHHTTTSCCBHHHHHHHHTCCHHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHCCCHHHHHH
T ss_conf 99997079999999999998968868999
No 140
>d1v4ra1 a.4.5.6 (A:1-100) Transcriptional repressor TraR, N-terminal domain {Streptomyces sp. [TaxId: 1931]}
Probab=52.28 E-value=6.4 Score=16.21 Aligned_cols=51 Identities=16% Similarity=0.219 Sum_probs=35.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---CCC-CHHHHHHHHCCCHHHHHCCCC
Q ss_conf 988866788788899999999999987491---035-479999984778545540268
Q T0575 1 MPTETFFNLPEEKRSRLIDVLLDEFAQNDY---DSV-SINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 1 Mp~~~~~~~~ee~r~~Il~aA~~lf~~~G~---~~~-t~~~IA~~agvs~~tiY~~F~ 54 (216)
||.+.... -.=++|.+.-.+.+....| +.+ |.+++|+..|||+.|+-.=+.
T Consensus 1 mp~~~p~~---~~y~qi~~~i~~~I~~g~l~~G~~LPs~r~La~~~~vSr~tvr~Al~ 55 (100)
T d1v4ra1 1 MPYKAPEG---KGYADVATHFRTLIKSGELAPGDTLPSVADIRAQFGVAAKTVSRALA 55 (100)
T ss_dssp CCCCCCSS---CCHHHHHHHHHHHTTTTSCCTTSBCCCHHHHHHHSSSCTTHHHHHTT
T ss_pred CCCCCCCC---CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 99899998---79999999999999849999939883699999998879899999999
No 141
>d1ji8a_ d.203.1.1 (A:) DsrC, the gamma subunit of dissimilatory sulfite reductase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=51.46 E-value=2.2 Score=19.79 Aligned_cols=45 Identities=20% Similarity=0.334 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 8899999999999987491035479999984778545540268888
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
+.--.||+...+-+.++|. .-+++.+++..|.+.+.+|.-|++.-
T Consensus 50 ~~Hw~vI~~lR~~y~~~~~-~P~~R~l~k~~~~~~~~L~~LFp~gP 94 (111)
T d1ji8a_ 50 EEHWKLVKYLREYWETFGT-CPPIKMVTKETGFSLEKIYQLFPSGP 94 (111)
T ss_dssp HHHHHHHHHHHHHTTTTSC-CCCSTTGGGGSCCCHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHCCCHHHHHHHCCCCH
T ss_conf 9999999999999999789-97089999982868899999859989
No 142
>d1d5ya2 a.4.1.8 (A:57-121) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=51.20 E-value=6.6 Score=16.09 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=26.3
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHCC-CHHHHHCCCCCHHH
Q ss_conf 999999998749103547999998477-85455402688889
Q T0575 18 IDVLLDEFAQNDYDSVSINRITERAGI-AKGSFYQYFADKKD 58 (216)
Q Consensus 18 l~aA~~lf~~~G~~~~t~~~IA~~agv-s~~tiY~~F~sKe~ 58 (216)
++.|..++... ..++.+||..+|. |...|++.|+..-+
T Consensus 3 l~~A~~lL~~t---~~~i~~IA~~~Gf~~~~~F~r~Fk~~~G 41 (65)
T d1d5ya2 3 LSKSAVALRLT---ARPILDIALQYRFDSQQTFTRAFKKQFA 41 (65)
T ss_dssp HHHHHHHHHHC---CCCHHHHHHHTTCSCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCC---CCCHHHHHHHHCCCCHHHHHHHHHHHHC
T ss_conf 99999998868---9999999999789987999999998889
No 143
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.66 E-value=6.8 Score=16.03 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=19.1
Q ss_pred HHHHHHHHHHH-HHCCCCCCCHHHHHHHHCCCHHHHHCCC
Q ss_conf 99999999999-8749103547999998477854554026
Q T0575 15 SRLIDVLLDEF-AQNDYDSVSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 15 ~~Il~aA~~lf-~~~G~~~~t~~~IA~~agvs~~tiY~~F 53 (216)
..|..|++-+. ...|. ..|.++||+.+|||..|+-+.|
T Consensus 44 ~~iaAa~iY~a~r~~~~-~~t~~eIa~~~~vs~~tI~k~y 82 (109)
T d1vola2 44 ISVAAAAIYMASQASAE-KRTQKEIGDIAGVADVTIRQSY 82 (109)
T ss_dssp HHHHHHHHHHHHHTSSS-CCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC-CCCHHHHHHHHCCCHHHHHHHH
T ss_conf 87999999999998189-9899999999898999999999
No 144
>d2fug21 c.47.1.21 (2:3-180) NADH-quinone oxidoreductase chain 2, NQO2 {Thermus thermophilus [TaxId: 274]}
Probab=50.61 E-value=4.2 Score=17.61 Aligned_cols=45 Identities=20% Similarity=0.386 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHH------HHHCCCCCH
Q ss_conf 8899999999999987491-03547999998477854------554026888
Q T0575 12 EKRSRLIDVLLDEFAQNDY-DSVSINRITERAGIAKG------SFYQYFADK 56 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~------tiY~~F~sK 56 (216)
.+|..+|..-..+=.+.|| ..-.+..||+..|++.+ |||.+|..+
T Consensus 20 ~~~~ali~~L~~iQ~~~Gyip~~al~~iA~~l~v~~a~V~~vatFY~~f~~~ 71 (178)
T d2fug21 20 GRRAAIMPLLRRVQQEEGWIRPERIEEIARLVGTTPTEVMGVASFYSYYQFV 71 (178)
T ss_dssp CGGGGHHHHHHHHHHHHSSCCHHHHHHHHHHHTSCHHHHHHHHHHSSSSCSS
T ss_pred CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCC
T ss_conf 4643899999999998698788999999999797989999999855311035
No 145
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=49.20 E-value=2.3 Score=19.66 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHH
Q ss_conf 35479999984778545540268888999999
Q T0575 32 SVSINRITERAGIAKGSFYQYFADKKDCYLYL 63 (216)
Q Consensus 32 ~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~ 63 (216)
++|-.++|+..|||+.++.++-.+|-.+=..+
T Consensus 14 glsq~~LA~~lGvs~~~is~ie~g~~~~s~~~ 45 (87)
T d2icta1 14 NVSLREFARAMEIAPSTASRLLTGKAALTPEM 45 (87)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHTSSCCCHHH
T ss_pred CCCHHHHHHHHHHCHHHHHHHHHHCCCCCHHH
T ss_conf 99999999997246999999998501798999
No 146
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=49.13 E-value=7.1 Score=15.86 Aligned_cols=20 Identities=5% Similarity=0.149 Sum_probs=13.2
Q ss_pred CCCHHHHHHHHCCCHHHHHC
Q ss_conf 35479999984778545540
Q T0575 32 SVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 32 ~~t~~~IA~~agvs~~tiY~ 51 (216)
.+|+.+||+..|++++++.+
T Consensus 49 ~~t~~~La~~~~~~~~~vs~ 68 (145)
T d2hr3a1 49 DVTPSELAAAERMRSSNLAA 68 (145)
T ss_dssp CBCHHHHHHHTTCCHHHHHH
T ss_pred CCCHHHHHHHHCCCHHHHHH
T ss_conf 97999999997989889999
No 147
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=48.67 E-value=7.2 Score=15.81 Aligned_cols=27 Identities=7% Similarity=0.041 Sum_probs=15.4
Q ss_pred HHHCCCCCCCHHHHHHHHCCCHHHHHC
Q ss_conf 987491035479999984778545540
Q T0575 25 FAQNDYDSVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 25 f~~~G~~~~t~~~IA~~agvs~~tiY~ 51 (216)
+.+.+-.++|+.+||+..|++++++-+
T Consensus 42 l~~~~~~~~~~~~ia~~l~~~~~~vs~ 68 (125)
T d1p4xa2 42 ITSQNKNIVLLKDLIETIHHKYPQTVR 68 (125)
T ss_dssp HHTTTTCCEEHHHHHHHSSSCHHHHHH
T ss_pred HHHCCCCCCCHHHHHHHHCCCCCHHHH
T ss_conf 998037883699999997898424999
No 148
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=48.14 E-value=7.4 Score=15.75 Aligned_cols=26 Identities=15% Similarity=0.103 Sum_probs=17.6
Q ss_pred HHHHCCCCCCCHHHHHHHHCCCHHHHHC
Q ss_conf 9987491035479999984778545540
Q T0575 24 EFAQNDYDSVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 24 lf~~~G~~~~t~~~IA~~agvs~~tiY~ 51 (216)
++.++| +.|+.+||+..+++++++..
T Consensus 49 ~l~~~~--~~t~~~la~~~~l~~~tvs~ 74 (162)
T d2fxaa1 49 IAYQLN--GASISEIAKFGVMHVSTAFN 74 (162)
T ss_dssp HHHHHT--SEEHHHHHHHTTCCHHHHHH
T ss_pred HHCCCC--CCCHHHHHHHHCCCCHHHHH
T ss_conf 521189--91899999997699403199
No 149
>d1p4wa_ a.4.6.2 (A:) Transcriptional regulator RcsB {Erwinia amylovora [TaxId: 552]}
Probab=47.61 E-value=5.2 Score=16.92 Aligned_cols=24 Identities=4% Similarity=0.054 Sum_probs=19.0
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 035479999984778545540268
Q T0575 31 DSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
.+.|..+||+..++|..|+-+|..
T Consensus 36 ~G~s~~eIA~~l~iS~~TV~~~~~ 59 (87)
T d1p4wa_ 36 EGFLVTEIAKKLNRSIKTISSQKK 59 (87)
T ss_dssp HTCCHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 289999998786979999999999
No 150
>d1nera_ a.35.1.2 (A:) Ner {Bacteriophage mu [TaxId: 10677]}
Probab=47.57 E-value=5.8 Score=16.54 Aligned_cols=26 Identities=12% Similarity=0.252 Sum_probs=20.8
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 03547999998477854554026888
Q T0575 31 DSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
.++|+.+|+.++|+|.+|+-+-+.-.
T Consensus 21 rG~sLa~lsr~~gls~stl~naL~rp 46 (74)
T d1nera_ 21 RKLSLSALSRQFGYAPTTLANALERH 46 (74)
T ss_dssp SSCCHHHHHHHHSCCHHHHHHTTTSS
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHCCC
T ss_conf 68879999999099878999998377
No 151
>d2dt5a1 a.4.5.38 (A:4-77) Transcriptional repressor Rex, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=46.45 E-value=7.8 Score=15.57 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHC
Q ss_conf 899999999999987491035479999984778545540
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~ 51 (216)
+|--+---.++.+.+.|.+.+|-.++|+.+|++...+-+
T Consensus 6 ~RLp~Ylr~L~~l~~~g~~~vSS~~La~~~gi~~~qVRK 44 (74)
T d2dt5a1 6 SRLITYLRILEELEAQGVHRTSSEQLGGLAQVTAFQVRK 44 (74)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEECHHHHHHHHCCCHHHHHH
T ss_conf 999999999999998799159699999997969999998
No 152
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.17 E-value=5.6 Score=16.64 Aligned_cols=39 Identities=13% Similarity=0.319 Sum_probs=30.5
Q ss_pred HHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 99999987491-0354799999847785455402688889
Q T0575 20 VLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 20 aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
+-...|.++.| +.-...+||...|++...|-..|.|+-.
T Consensus 14 ~Le~~F~~~~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR~ 53 (58)
T d1ig7a_ 14 ALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRA 53 (58)
T ss_dssp HHHHHHHHCSCCCHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHEEECCCCHHH
T ss_conf 9999999878888999999999929994061000712676
No 153
>d3bwga1 a.4.5.6 (A:5-82) Transcriptional regulator YydK {Bacillus subtilis [TaxId: 1423]}
Probab=45.93 E-value=7.9 Score=15.51 Aligned_cols=36 Identities=6% Similarity=0.186 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHCCC---CCC-CHHHHHHHHCCCHHHHHCC
Q ss_conf 99999999987491---035-4799999847785455402
Q T0575 17 LIDVLLDEFAQNDY---DSV-SINRITERAGIAKGSFYQY 52 (216)
Q Consensus 17 Il~aA~~lf~~~G~---~~~-t~~~IA~~agvs~~tiY~~ 52 (216)
|.+.-...+...-| +.+ |.+++|+..|||+.|+..-
T Consensus 3 i~~~i~~~I~~g~l~~G~~LPse~~La~~~~vSr~tvr~A 42 (78)
T d3bwga1 3 IATEIETYIEEHQLQQGDKLPVLETLMAQFEVSKSTITKS 42 (78)
T ss_dssp HHHHHHHHHHHTTCCTTCBCCCHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
T ss_conf 9999999998499999399937999999988798999999
No 154
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=45.58 E-value=8 Score=15.47 Aligned_cols=38 Identities=11% Similarity=0.178 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH
Q ss_conf 888999999999999874910354799999847785455
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSF 49 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~ti 49 (216)
.|+-.+|-.+..++..+.| ..-|..+||++.|++.--+
T Consensus 11 ~e~~~ki~~~~~~l~q~lg-RePT~~EiA~~l~~~~e~V 48 (57)
T d1l0oc_ 11 KEMGNKIRKAKDELSKTRG-RAPTVTEIADHLGISPEDV 48 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHT-SCCBHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHH
T ss_conf 9999999999999998729-9989999999979399999
No 155
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.20 E-value=5.2 Score=16.92 Aligned_cols=40 Identities=13% Similarity=0.363 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHCC-CCCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 999999999998749-1035479999984778545540268888
Q T0575 15 SRLIDVLLDEFAQND-YDSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 15 ~~Il~aA~~lf~~~G-~~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
..||++.. ..+. .+.....+||+..|++...|-..|.|+-
T Consensus 9 ~~~Le~~F---~~~~~P~~~~~~~LA~~lgl~~~qV~~WFqNrR 49 (53)
T d1le8a_ 9 RAFLEQVF---RRKQSLNSKEKEEVAKKCGITPLQVRVWFINKR 49 (53)
T ss_dssp HHHHHHHH---HHCSCCCHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 99999999---838998999999999997899888899888344
No 156
>d2gaua1 a.4.5.4 (A:152-232) Transcriptional regulator PG0396, C-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=43.91 E-value=8.4 Score=15.29 Aligned_cols=40 Identities=15% Similarity=0.204 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHCCCC--------CCCHHHHHHHHCCCHHHHHCCC
Q ss_conf 999999999999874910--------3547999998477854554026
Q T0575 14 RSRLIDVLLDEFAQNDYD--------SVSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~~--------~~t~~~IA~~agvs~~tiY~~F 53 (216)
+++|...-..+..+.|-. .+|-.+||..+|+|+.|+.+.+
T Consensus 3 ~~Rla~~Ll~l~~~~g~~~~~~~i~~~lt~~eLA~~~G~sretvsr~L 50 (81)
T d2gaua1 3 RGRLAETLLILKENFGFENDGATLSIYLSREELATLSNMTVSNAIRTL 50 (81)
T ss_dssp HHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHH
T ss_conf 899999999999983998899778606899999999799899999999
No 157
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=43.51 E-value=8.6 Score=15.24 Aligned_cols=41 Identities=17% Similarity=0.394 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 9999999999987491-0354799999847785455402688889
Q T0575 15 SRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 15 ~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
..+|+ ..|....| +.....+||+..|++...|...|.|+-.
T Consensus 11 ~~~Le---~~F~~~~~P~~~~~~~La~~l~l~~~~V~~WFqNrR~ 52 (58)
T d1au7a1 11 KDALE---RHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQ 52 (58)
T ss_dssp HHHHH---HHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHH---HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999---9998836999999999999968999999999799848
No 158
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.30 E-value=5.8 Score=16.56 Aligned_cols=39 Identities=21% Similarity=0.391 Sum_probs=30.7
Q ss_pred HHHHHHHH-CCC-CCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 99999987-491-0354799999847785455402688889
Q T0575 20 VLLDEFAQ-NDY-DSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 20 aA~~lf~~-~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
.-...|.. +.| +.....+||+..|++...|...|.|+-.
T Consensus 15 ~Le~~F~~~n~yP~~~~r~~LA~~lgL~~~~VqvWFqNrRa 55 (72)
T d1uhsa_ 15 ILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLA 55 (72)
T ss_dssp HHHHHHHSSCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999987423389999999999939978999998999999
No 159
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=43.28 E-value=8.6 Score=15.22 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=22.3
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 99987491035479999984778545540268
Q T0575 23 DEFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 23 ~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
+++.+ | .+|-.+||+..|+|++|+.++..
T Consensus 6 ~~i~~-~--pisr~eLa~~~gls~~TVs~~v~ 34 (62)
T d2hoea1 6 KRIMK-S--PVSRVELAEELGLTKTTVGEIAK 34 (62)
T ss_dssp HHHHH-S--CBCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHH-C--CCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 99997-8--96999999998939999999999
No 160
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]} SCOP: d1omqa_ d2hi3a1
Probab=43.17 E-value=6 Score=16.43 Aligned_cols=42 Identities=19% Similarity=0.231 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHCCCCCC-CHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 99999999987491035-4799999847785455402688889
Q T0575 17 LIDVLLDEFAQNDYDSV-SINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 17 Il~aA~~lf~~~G~~~~-t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
-+++-...|..+.|-.. ...+||+.+|++...|-..|.|+-.
T Consensus 38 Ql~~Le~~F~~n~yP~~~~r~~LA~~lgl~~~~V~vWFQNrR~ 80 (88)
T d1b72a_ 38 QLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRM 80 (88)
T ss_dssp HHHHHHHHHTTCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHH
T ss_conf 9999999997069999888999998634881213322347478
No 161
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=43.10 E-value=8.7 Score=15.20 Aligned_cols=18 Identities=6% Similarity=0.224 Sum_probs=9.1
Q ss_pred CCCHHHHHHHHCCCHHHH
Q ss_conf 354799999847785455
Q T0575 32 SVSINRITERAGIAKGSF 49 (216)
Q Consensus 32 ~~t~~~IA~~agvs~~ti 49 (216)
++|+.+||+..+++++++
T Consensus 48 ~~t~~ela~~~~i~~~~v 65 (138)
T d1jgsa_ 48 CITPVELKKVLSVDLGAL 65 (138)
T ss_dssp SBCHHHHHHHHTCCHHHH
T ss_pred CCCHHHHHHHHCCCHHHH
T ss_conf 989999999978788579
No 162
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.65 E-value=8.8 Score=15.15 Aligned_cols=41 Identities=17% Similarity=0.444 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 99999999999987491-035479999984778545540268888
Q T0575 14 RSRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
.-.+|++ .|..+.| ......+||...|++...|...|.|+-
T Consensus 15 Q~~~Le~---~F~~~~~P~~~~r~~LA~~l~l~~~~V~~WFqNrR 56 (76)
T d2ecba1 15 QLRVLQA---SFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKK 56 (76)
T ss_dssp HHHHHHH---HHHHCSSCCHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHH---HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 9999999---99987788899999999996898999999489899
No 163
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=42.65 E-value=8.1 Score=15.43 Aligned_cols=36 Identities=8% Similarity=0.181 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 889999999999998749103547999998477854554
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFY 50 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY 50 (216)
++-..|+.. -|.=.|....|+.+||+..|||+..+.
T Consensus 11 ~rer~Ii~~---ryGl~~~~~~tl~eIa~~lgiS~erVr 46 (61)
T d1ku3a_ 11 EREAMVLKM---RKGLIDGREHTLEEVGAYFGVTRERIR 46 (61)
T ss_dssp HHHHHHHHH---HHTTTTSSCCCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHH---HHCCCCCCCCCHHHHHHHHCCCHHHHH
T ss_conf 999999999---847789997789998899798899999
No 164
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=42.37 E-value=8.9 Score=15.12 Aligned_cols=27 Identities=15% Similarity=0.165 Sum_probs=18.3
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCHHHHHC
Q ss_conf 99987491035479999984778545540
Q T0575 23 DEFAQNDYDSVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 23 ~lf~~~G~~~~t~~~IA~~agvs~~tiY~ 51 (216)
..+.++| ++|+.+||+..|++++++.+
T Consensus 37 ~~l~~~~--~~t~~~la~~~~i~~~~vs~ 63 (136)
T d2fbia1 37 RILRQQG--EMESYQLANQACILRPSMTG 63 (136)
T ss_dssp HHHHHHC--SEEHHHHHHHTTCCHHHHHH
T ss_pred HHHHHCC--CCCHHHHHHHHCCCHHHHHH
T ss_conf 9999769--98999999998878988999
No 165
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=42.00 E-value=7.1 Score=15.86 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=19.4
Q ss_pred CCCCHHHHHHHHCCCHHHHHCCC
Q ss_conf 03547999998477854554026
Q T0575 31 DSVSINRITERAGIAKGSFYQYF 53 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY~~F 53 (216)
..+|+.+||+..|++++++-++-
T Consensus 20 ~~lt~~eLa~~l~i~~~~vs~~l 42 (85)
T d3ctaa1 20 AYLTSSKLADMLGISQQSASRII 42 (85)
T ss_dssp EECCHHHHHHHHTSCHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHH
T ss_conf 99889999999887887899999
No 166
>d1rzsa_ a.35.1.2 (A:) cro p22 {Bacteriophage p22 [TaxId: 10754]}
Probab=41.65 E-value=7.6 Score=15.63 Aligned_cols=19 Identities=16% Similarity=0.373 Sum_probs=16.8
Q ss_pred CHHHHHHHHCCCHHHHHCC
Q ss_conf 4799999847785455402
Q T0575 34 SINRITERAGIAKGSFYQY 52 (216)
Q Consensus 34 t~~~IA~~agvs~~tiY~~ 52 (216)
+...+|+..|||++++|..
T Consensus 12 ~~~k~A~algis~~AVsqW 30 (61)
T d1rzsa_ 12 TQRAVAKALGISDAAVSQW 30 (61)
T ss_dssp SHHHHHHHHTCCHHHHHHC
T ss_pred CHHHHHHHHCCCHHHHHHH
T ss_conf 7999999969989999988
No 167
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=40.34 E-value=9.1 Score=15.03 Aligned_cols=41 Identities=15% Similarity=0.309 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHCCCC-CCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 999999999999874910-35479999984778545540268888
Q T0575 14 RSRLIDVLLDEFAQNDYD-SVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~~-~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
.-.+|+ ..|..+.|- ......||.+.|++...|...|.|+-
T Consensus 14 Q~~~Le---~~F~~n~~Ps~~~~~~LA~~l~l~~~~V~~WFqNrR 55 (66)
T d1bw5a_ 14 QLHTLR---TCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKR 55 (66)
T ss_dssp HHHHHH---HHHHHCSCCCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 999999---999987899999999999990939788225307688
No 168
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.79 E-value=3.1 Score=18.70 Aligned_cols=48 Identities=17% Similarity=0.357 Sum_probs=32.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 8886678878889999999999998749-103547999998477854554026888
Q T0575 2 PTETFFNLPEEKRSRLIDVLLDEFAQND-YDSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 2 p~~~~~~~~ee~r~~Il~aA~~lf~~~G-~~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
|+..|. .....+|+.. |..+. .+.....+||...|++...|...|.|+
T Consensus 1 PRt~ft----~~Q~~~Le~~---F~~n~~P~~~~~~~LA~~l~l~~~~V~~WFqNr 49 (50)
T d1s7ea1 1 PRLVFT----DVQRRTLHAI---FKENKRPSKELQITISQQLGLELSTVSNFFMNA 49 (50)
T ss_dssp CCSCCC----HHHHHHHHHH---TTSSCSSTHHHHHHHHTTSCSSSHHHHHHHHHC
T ss_pred CCCCCC----HHHHHHHHHH---HHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCCC
T ss_conf 997899----9999999999---998799999999999999790988922107808
No 169
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=37.88 E-value=10 Score=14.63 Aligned_cols=40 Identities=15% Similarity=0.248 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCC
Q ss_conf 88999999999999874910354799999847785455402
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQY 52 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~ 52 (216)
++..+|-.+..+|-.+.| ..-|..+||++.|++..-+...
T Consensus 7 ~~~~ki~~a~~~L~~~lG-R~Pt~~EiA~~lg~s~~e~~~~ 46 (77)
T d1rp3a1 7 EKERRIKEVVEKLKEKLG-REPTDEEVAKELGISTEELFKT 46 (77)
T ss_dssp HHHHHHHHHHHHHHHHHS-SCCCHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHH
T ss_conf 999999999999999988-6979999999979499999999
No 170
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=37.33 E-value=9.7 Score=14.83 Aligned_cols=41 Identities=12% Similarity=0.435 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 99999999999987491-035479999984778545540268888
Q T0575 14 RSRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
.-.+|+ ..|..+.| +......||...|+|...|-..|.|+-
T Consensus 13 Q~~~Le---~~F~~n~yPs~~~r~~LA~~lgl~~~~V~~WFqNrR 54 (65)
T d1fjla_ 13 QLDELE---RAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRR 54 (65)
T ss_dssp HHHHHH---HHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 999999---999986999838999999995998789568616478
No 171
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.10 E-value=7.5 Score=15.70 Aligned_cols=41 Identities=20% Similarity=0.277 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHCCCCC-CCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 9999999998749103-5479999984778545540268888
Q T0575 17 LIDVLLDEFAQNDYDS-VSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 17 Il~aA~~lf~~~G~~~-~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
-+++-...|..+.|-. -...+||...|++...|...|.|+-
T Consensus 19 q~~~Le~~F~~n~~P~~~~r~~La~~~~l~~~~V~~WFqNrR 60 (67)
T d1ocpa_ 19 VRWSLETMFLKCPKPSLQQITHIANQLGLEKDVVRVWFCNRR 60 (67)
T ss_dssp HHHHHHHHHSSCSCCCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 999999999872579999999999998478899999858788
No 172
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=36.92 E-value=11 Score=14.52 Aligned_cols=19 Identities=16% Similarity=0.167 Sum_probs=10.7
Q ss_pred CCCHHHHHHHHCCCHHHHH
Q ss_conf 3547999998477854554
Q T0575 32 SVSINRITERAGIAKGSFY 50 (216)
Q Consensus 32 ~~t~~~IA~~agvs~~tiY 50 (216)
..|+.+||+..|+|++++.
T Consensus 46 ~~t~~~La~~l~i~~~~vs 64 (140)
T d2etha1 46 PKKMKEIAEFLSTTKSNVT 64 (140)
T ss_dssp CBCHHHHHHHTTSCHHHHH
T ss_pred CCCHHHHHHHHCCCHHHHH
T ss_conf 9599999999896987999
No 173
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=36.71 E-value=11 Score=14.49 Aligned_cols=20 Identities=10% Similarity=0.390 Sum_probs=13.7
Q ss_pred CCCHHHHHHHHCCCHHHHHC
Q ss_conf 35479999984778545540
Q T0575 32 SVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 32 ~~t~~~IA~~agvs~~tiY~ 51 (216)
++|+.+||+..|++++++-+
T Consensus 47 ~~t~~~La~~~~i~~~~vsr 66 (137)
T d1z91a1 47 TLTVKKMGEQLYLDSGTLTP 66 (137)
T ss_dssp EEEHHHHHHTTTCCHHHHHH
T ss_pred CCCHHHHHHHHCCCHHHHHH
T ss_conf 99899999997968888979
No 174
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=36.66 E-value=8.9 Score=15.11 Aligned_cols=42 Identities=10% Similarity=0.134 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHC-CC--CCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 8999999999999874-91--035479999984778545540268
Q T0575 13 KRSRLIDVLLDEFAQN-DY--DSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~-G~--~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
-+++|..--....... |- -.+|.++||...|+|+.++.+.++
T Consensus 5 v~~Rla~~Ll~~~~~~~~~~~i~lt~~elA~~lg~sr~tvsr~l~ 49 (73)
T d1zyba1 5 LKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDTRLNISKTLN 49 (73)
T ss_dssp HHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHH
T ss_conf 999999999984565089867506999999897988999999999
No 175
>d2ieca1 d.316.1.1 (A:11-123) Hypothetical protein MK0786 {Methanopyrus kandleri [TaxId: 2320]}
Probab=36.52 E-value=2.9 Score=18.89 Aligned_cols=19 Identities=37% Similarity=0.627 Sum_probs=15.0
Q ss_pred HHHHHHHCCCHHHHHCCCC
Q ss_conf 9999984778545540268
Q T0575 36 NRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 36 ~~IA~~agvs~~tiY~~F~ 54 (216)
+.-+=+|||+-|++||.|-
T Consensus 5 erA~FEaGIklGaLyHQF~ 23 (113)
T d2ieca1 5 ERAIFEAGITLGAIYHQFC 23 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCHHEEEC
T ss_conf 8777642011300220202
No 176
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.20 E-value=11 Score=14.44 Aligned_cols=41 Identities=10% Similarity=0.346 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHCC-CCCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 999999999998749-1035479999984778545540268888
Q T0575 15 SRLIDVLLDEFAQND-YDSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 15 ~~Il~aA~~lf~~~G-~~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
-.||++..+- .+- ...-...+||++.|++...|-..|.|+-
T Consensus 19 ~~~Le~~F~~--~~~~P~~~~~~~La~~lgl~~~qV~~WFqNrR 60 (71)
T d1wi3a_ 19 LGILQSFIHD--VGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQR 60 (71)
T ss_dssp HHHHHHHHHH--HCSCCCHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 9999999998--06779899999998782799999999818557
No 177
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.71 E-value=7.5 Score=15.67 Aligned_cols=40 Identities=10% Similarity=0.353 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHH-CCC-CCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 999999999987-491-0354799999847785455402688889
Q T0575 16 RLIDVLLDEFAQ-NDY-DSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 16 ~Il~aA~~lf~~-~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
.||+ +.|.. ..| +...+.+||+..|+|...|...|.|+-.
T Consensus 14 ~iLE---~~F~~~~~yPs~~~~~~LA~~lgls~~qV~~WFqNrR~ 55 (59)
T d2cqxa1 14 DTLE---KVFVSVTKYPDEKRLKGLSKQLDWSVRKIQCWFRHRRN 55 (59)
T ss_dssp THHH---HHHHHTCSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHH---HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 9999---99988489959999999999978199999999996161
No 178
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.60 E-value=9.9 Score=14.77 Aligned_cols=40 Identities=10% Similarity=0.338 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHH-CC-CCCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 999999999987-49-10354799999847785455402688889
Q T0575 16 RLIDVLLDEFAQ-ND-YDSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 16 ~Il~aA~~lf~~-~G-~~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
.||+ ..|.+ .. .......+||+..|++...|...|.++-.
T Consensus 6 ~iLE---~~F~~~~~~P~~~~~~~LA~~~~ls~~qV~~WFqNrR~ 47 (52)
T d1x2ma1 6 AILE---KVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRN 47 (52)
T ss_dssp HHHH---HHHHTTCSSCCHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred HHHH---HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 9999---99978689939999999999979699998998786044
No 179
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=35.12 E-value=11 Score=14.36 Aligned_cols=41 Identities=10% Similarity=0.357 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 99999999999987491-035479999984778545540268888
Q T0575 14 RSRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
.-.+|+ .+|..+.| +.....+||...|++...|-..|.|+-
T Consensus 10 Ql~~Le---~~F~~~~yp~~~~r~~LA~~lgl~~~qV~vWFqNrR 51 (57)
T d1jgga_ 10 QLGRLE---KEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRR 51 (57)
T ss_dssp HHHHHH---HHHHHCSCCCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHH
T ss_conf 999999---999877999999999999995998668010041356
No 180
>d1ku2a1 a.4.13.1 (A:273-332) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=34.78 E-value=11 Score=14.28 Aligned_cols=34 Identities=18% Similarity=0.064 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH
Q ss_conf 88999999999999874910354799999847785
Q T0575 12 EKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAK 46 (216)
Q Consensus 12 e~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~ 46 (216)
++-.++..+..++..+.| ..-|..+||++.|++.
T Consensus 9 e~i~rv~r~~~~l~qe~g-RePt~eEiA~~l~~~l 42 (60)
T d1ku2a1 9 ETINKLSRTARQLQQELG-REPSYEEIAEAMGPGW 42 (60)
T ss_dssp HHHHHHHHHHHHHHHHHT-SCCCHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHCCCC
T ss_conf 999999999999999968-9999999999887999
No 181
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=34.53 E-value=12 Score=14.25 Aligned_cols=21 Identities=10% Similarity=0.308 Sum_probs=15.7
Q ss_pred CCC-CHHHHHHHHCCCHHHHHC
Q ss_conf 035-479999984778545540
Q T0575 31 DSV-SINRITERAGIAKGSFYQ 51 (216)
Q Consensus 31 ~~~-t~~~IA~~agvs~~tiY~ 51 (216)
+.+ |.+++|+..|||+.|+-.
T Consensus 25 ~~LPs~~eLa~~~~vSr~tvr~ 46 (74)
T d1hw1a1 25 TILPAERELSELIGVTRTTLRE 46 (74)
T ss_dssp SBCCCHHHHHHHHTCCHHHHHH
T ss_pred CCCCCHHHHHHHHCCCHHHHHH
T ss_conf 9983499999998979899999
No 182
>d2i52a1 d.316.1.1 (A:1-120) Hypothetical protein PTO0218 {Picrophilus torridus [TaxId: 82076]}
Probab=33.10 E-value=5.1 Score=16.97 Aligned_cols=21 Identities=29% Similarity=0.523 Sum_probs=15.7
Q ss_pred CHHHHHHHHCCCHHHHHCCCC
Q ss_conf 479999984778545540268
Q T0575 34 SINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 34 t~~~IA~~agvs~~tiY~~F~ 54 (216)
.-+.-+=+|||+-|++||.|-
T Consensus 13 drerA~FEaGIklGaLyHQFv 33 (120)
T d2i52a1 13 DIQRAFFEAGIKLGAIFHQYT 33 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCHHEEEC
T ss_conf 488888763011300210321
No 183
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=32.99 E-value=12 Score=14.07 Aligned_cols=15 Identities=13% Similarity=0.104 Sum_probs=4.8
Q ss_pred CCHHHHHHHHCCCHH
Q ss_conf 547999998477854
Q T0575 33 VSINRITERAGIAKG 47 (216)
Q Consensus 33 ~t~~~IA~~agvs~~ 47 (216)
.|+.+||+..|++++
T Consensus 49 ~t~~ela~~l~~~~~ 63 (115)
T d1hsja1 49 ISSKEIAKCSEFKPY 63 (115)
T ss_dssp EEHHHHHHSSCCCHH
T ss_pred CCHHHHHHHHCCCHH
T ss_conf 489999999788853
No 184
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=32.59 E-value=12 Score=14.02 Aligned_cols=15 Identities=7% Similarity=-0.108 Sum_probs=6.1
Q ss_pred HHHHHHHHHHCCCCC
Q ss_conf 999999998648899
Q T0575 137 FKQLVEQGIADGSLV 151 (216)
Q Consensus 137 ~~~~i~~~~~~g~~~ 151 (216)
+...+....+.|.+.
T Consensus 66 vs~~i~~Le~~gli~ 80 (115)
T d2frha1 66 VVKAVKILSQEDYFD 80 (115)
T ss_dssp HHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHE
T ss_conf 999999998466513
No 185
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=32.57 E-value=12 Score=14.02 Aligned_cols=19 Identities=11% Similarity=0.403 Sum_probs=9.3
Q ss_pred CCCHHHHHHHHCCCHHHHH
Q ss_conf 3547999998477854554
Q T0575 32 SVSINRITERAGIAKGSFY 50 (216)
Q Consensus 32 ~~t~~~IA~~agvs~~tiY 50 (216)
++|..+||+..|++++++.
T Consensus 48 ~~t~~~la~~l~~~~~~~s 66 (136)
T d2bv6a1 48 PVNVKKVVTELALDTGTVS 66 (136)
T ss_dssp EEEHHHHHHHTTCCTTTHH
T ss_pred CCCHHHHHHHHCCCHHHHH
T ss_conf 9799999999797883799
No 186
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=32.34 E-value=12 Score=14.23 Aligned_cols=35 Identities=3% Similarity=0.275 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 89999999999998749103547999998477854554
Q T0575 13 KRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFY 50 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY 50 (216)
+-..|+.. -|.=.|....|+.+||+..|||+..+-
T Consensus 9 rE~~Ii~~---rfGl~~~~~~tl~eI~~~lgiSrerVr 43 (68)
T d2p7vb1 9 REAKVLRM---RFGIDMNTDYTLEEVGKQFDVTRERIR 43 (68)
T ss_dssp HHHHHHHH---HTTTTSSSCCCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHH---HCCCCCCCCCCHHHHHHHHCCCHHHHH
T ss_conf 99999999---808899986889999999797899999
No 187
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.32 E-value=12 Score=13.99 Aligned_cols=40 Identities=10% Similarity=0.363 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 9999999999987491-035479999984778545540268888
Q T0575 15 SRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 15 ~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
-.+|+ ..|..+.| +......||...|++...|...|.|+-
T Consensus 12 ~~~Le---~~F~~n~yp~~~~r~~LA~~l~L~~~qV~~WFqNrR 52 (57)
T d2e1oa1 12 TIELE---KKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRR 52 (57)
T ss_dssp HHHHH---HHHHHCSSCCHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHH---HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 99999---999857999999999999995898778347412213
No 188
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=32.14 E-value=12 Score=13.97 Aligned_cols=39 Identities=13% Similarity=0.311 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHCCC---CCCCHHHHHHHHCCCHHHHHC
Q ss_conf 899999999999987491---035479999984778545540
Q T0575 13 KRSRLIDVLLDEFAQNDY---DSVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 13 ~r~~Il~aA~~lf~~~G~---~~~t~~~IA~~agvs~~tiY~ 51 (216)
+-++|.+.-.+.+....| +.++.+++|++.|||+.++..
T Consensus 3 ~~~qi~~~l~~~I~~g~~~~G~~l~~~~La~~~~vSr~tvr~ 44 (69)
T d2hs5a1 3 RTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVRE 44 (69)
T ss_dssp HHHHHHHHHHHHHHHTSSCTTCEECHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHH
T ss_conf 899999999999982999992966999999998979899999
No 189
>d1ft9a1 a.4.5.4 (A:134-213) CO-sensing protein CooA, C-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=31.90 E-value=13 Score=13.94 Aligned_cols=41 Identities=10% Similarity=0.217 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHCCC---------CCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 99999999999987491---------035479999984778545540268
Q T0575 14 RSRLIDVLLDEFAQNDY---------DSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~---------~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
+++|...-..+-.+.|- -..|..+||.-+|+|+.|+.+.+.
T Consensus 3 ~~Rla~~Ll~l~~~~g~~~~~~~~i~~~~t~~eiA~~lG~sretvsr~l~ 52 (80)
T d1ft9a1 3 KQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSSRQTTSTALN 52 (80)
T ss_dssp HHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 89999999999998599889971785378999999997988999999999
No 190
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=31.10 E-value=13 Score=13.85 Aligned_cols=20 Identities=5% Similarity=0.223 Sum_probs=11.0
Q ss_pred CCCCHHHHHHHHCCCHHHHH
Q ss_conf 03547999998477854554
Q T0575 31 DSVSINRITERAGIAKGSFY 50 (216)
Q Consensus 31 ~~~t~~~IA~~agvs~~tiY 50 (216)
..+|+.+||+..+++++++-
T Consensus 49 ~~~t~~eia~~~~~~~~~vs 68 (125)
T d1p4xa1 49 NTLPFKKIVSDLCYKQSDLV 68 (125)
T ss_dssp SEEEHHHHHHHSSSCGGGTH
T ss_pred CCCCHHHHHHHHCCCCCHHH
T ss_conf 98679999999688824399
No 191
>d2i52a1 d.316.1.1 (A:1-120) Hypothetical protein PTO0218 {Picrophilus torridus [TaxId: 82076]} SCOP: d2ieca1 d2iecb1
Probab=30.78 E-value=5.9 Score=16.49 Aligned_cols=28 Identities=18% Similarity=0.361 Sum_probs=18.5
Q ss_pred HHHHHHHCCCHHHHHCCCC-------CHHHHHHHH
Q ss_conf 9999984778545540268-------888999999
Q T0575 36 NRITERAGIAKGSFYQYFA-------DKKDCYLYL 63 (216)
Q Consensus 36 ~~IA~~agvs~~tiY~~F~-------sKe~L~~~~ 63 (216)
+.-+=+|||+-|++||.|- |++.|=.++
T Consensus 15 erA~FEaGIklGALyHQFvGtPVs~~sa~slE~AI 49 (120)
T d2i52a1 15 QRAFFEAGIKLGAIFHQYTGIPVNSENASMAEEFI 49 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECTTTHHHHHHHH
T ss_pred HHHHHHCCCHHCEEEEEEEEECCCHHHHHHHHHHH
T ss_conf 77653422101203533364122852389999999
No 192
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.35 E-value=13 Score=13.76 Aligned_cols=41 Identities=15% Similarity=0.413 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 99999999999987491-035479999984778545540268888
Q T0575 14 RSRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
.-.+|+ ..|..+.| +.....+||...|++...|-..|.|+-
T Consensus 12 Q~~~Le---~~F~~~~yp~~~~r~~LA~~l~l~~~qV~vWFqNrR 53 (58)
T d2craa1 12 QLRELE---REYAANKFITKDKRRKISAATSLSERQITIWFQNRR 53 (58)
T ss_dssp HHHHHH---HHHHHCSSCCHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHCCCCCHHHHHHHHHHCCCCHHHEEECCCCHH
T ss_conf 999999---999666999989999999982999778113240122
No 193
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=29.76 E-value=11 Score=14.29 Aligned_cols=67 Identities=13% Similarity=0.147 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHHHHHHHH-CCCCCCCHHHHHHHHCCCHH---HHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 88788899999999999987-49103547999998477854---554026888899999999999999999
Q T0575 8 NLPEEKRSRLIDVLLDEFAQ-NDYDSVSINRITERAGIAKG---SFYQYFADKKDCYLYLIQLGIEQKTAF 74 (216)
Q Consensus 8 ~~~ee~r~~Il~aA~~lf~~-~G~~~~t~~~IA~~agvs~~---tiY~~F~sKe~L~~~~~~~~~~~~~~~ 74 (216)
+.+++.+++++++...|-.+ .|...++...-....+.+.| .++--|.|++++-...-.-....+.+.
T Consensus 13 ~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~ 83 (103)
T d1q4ra_ 13 GVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAHVEFATI 83 (103)
T ss_dssp TCCHHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHH
T ss_conf 99999999999999986630740389885266687555799569999997899999988679829999999
No 194
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.10 E-value=13 Score=13.96 Aligned_cols=41 Identities=17% Similarity=0.284 Sum_probs=28.4
Q ss_pred HHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 9999999987491-0354799999847785455402688889
Q T0575 18 IDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 18 l~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
++.-..+|..+.| ..-...+||..+|++...|...|.|+-.
T Consensus 39 l~~Le~~F~~n~yPs~~~r~~LA~~l~l~~~~V~vWFqNrR~ 80 (88)
T d1b72a_ 39 LTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRM 80 (88)
T ss_dssp HHHHHHHHTTCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHEEECCHHHHH
T ss_conf 999999999678875278999999829997784243575878
No 195
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.38 E-value=14 Score=13.52 Aligned_cols=16 Identities=6% Similarity=0.121 Sum_probs=6.0
Q ss_pred CCHHHHHHHHCCCHHH
Q ss_conf 5479999984778545
Q T0575 33 VSINRITERAGIAKGS 48 (216)
Q Consensus 33 ~t~~~IA~~agvs~~t 48 (216)
.|+.+||+..++++++
T Consensus 51 ~t~~~la~~l~~~~~~ 66 (141)
T d1lnwa_ 51 LNLQDLGRQMCRDKAL 66 (141)
T ss_dssp CBHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHCCCHHH
T ss_conf 8999999997845737
No 196
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.20 E-value=14 Score=13.50 Aligned_cols=39 Identities=21% Similarity=0.356 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHCC-CCCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 99999999998749-1035479999984778545540268888
Q T0575 16 RLIDVLLDEFAQND-YDSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 16 ~Il~aA~~lf~~~G-~~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
.+|+.+ |.... ........||...|++...|-..|.|+-
T Consensus 11 ~~Le~~---F~~~~~P~~~~~~~LA~~lgL~~~qV~~WFqNrR 50 (57)
T d1e3oc1 11 VALEKS---FMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRR 50 (57)
T ss_dssp HHHHHH---HHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHH---HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 999999---9865789999999999997879999999999998
No 197
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.68 E-value=15 Score=13.43 Aligned_cols=42 Identities=14% Similarity=0.408 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 99999999999987491-0354799999847785455402688889
Q T0575 14 RSRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
.-.||++. |..+.| ....+..||...|++...|...|.|+-.
T Consensus 14 Q~~~Le~~---F~~n~~Ps~~~~~~La~~~gL~~~qV~~WF~NrR~ 56 (76)
T d2ecca1 14 QLAILKSF---FLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRY 56 (76)
T ss_dssp HHHHHHHH---HHHCSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999---99867899999999999980579999999999999
No 198
>d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.23 E-value=15 Score=13.37 Aligned_cols=40 Identities=18% Similarity=0.237 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHCCCC--------CCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 99999999999874910--------35479999984778545540268
Q T0575 15 SRLIDVLLDEFAQNDYD--------SVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 15 ~~Il~aA~~lf~~~G~~--------~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
.++...-..+..+.|-. .+|-++||.-+|+|+.|+-+.+.
T Consensus 4 ~Rla~~Ll~l~~~~g~~~~~~~i~l~lt~~~lA~~~G~sRetvsr~L~ 51 (69)
T d1i5za1 4 GRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILK 51 (69)
T ss_dssp HHHHHHHHHGGGSTTCCCCSSSCEEECCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 999999999999809988897456178999999897997999999999
No 199
>d1bjxa_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.90 E-value=11 Score=14.29 Aligned_cols=45 Identities=7% Similarity=0.200 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH--HCCCCCH
Q ss_conf 888999999999999874910354799999847785455--4026888
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSF--YQYFADK 56 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~ti--Y~~F~sK 56 (216)
+..-+...++|.. +...-|..++-.++++..|++..+| |+.|..+
T Consensus 31 ~~~~~~F~~~A~~-~~d~~F~~t~~~~v~~~~~v~~~~Ivl~k~~de~ 77 (110)
T d1bjxa_ 31 SDSAKQFLQAAEA-IDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEG 77 (110)
T ss_dssp SHHHHHHHHHHHH-CSSSCEEEECCSHHHHHTTCSSCEEEEEESSSSS
T ss_pred CHHHHHHHHHHHH-CCCCEEEEECCHHHHHHCCCCCCEEEEECCCCCC
T ss_conf 5689999999984-7675399987899999749999969996367756
No 200
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=25.96 E-value=16 Score=13.23 Aligned_cols=41 Identities=15% Similarity=0.379 Sum_probs=30.1
Q ss_pred HHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHHH
Q ss_conf 9999999987491-0354799999847785455402688889
Q T0575 18 IDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKKD 58 (216)
Q Consensus 18 l~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe~ 58 (216)
+.+-...|....| +.....+||...|++...|--.|.|+-.
T Consensus 13 l~~Le~~F~~~~yp~~~~r~~LA~~l~l~~~~V~iWFqNrR~ 54 (67)
T d1zq3p1 13 IAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRR 54 (67)
T ss_dssp HHHHHHHHTTCSSCCHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHH
T ss_conf 999999999877877899999998709981331056630777
No 201
>d1ufma_ a.4.5.47 (A:) COP9 signalosome complex subunit 4, GSN4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.87 E-value=16 Score=13.20 Aligned_cols=33 Identities=12% Similarity=0.190 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHH
Q ss_conf 9999999999998749103547999998477854
Q T0575 14 RSRLIDVLLDEFAQNDYDSVSINRITERAGIAKG 47 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~ 47 (216)
+++|++..+..+.+ -|..+++..+|+..+++..
T Consensus 13 ~~~i~Ehni~~is~-~Y~~Isl~~la~~l~l~~~ 45 (84)
T d1ufma_ 13 DRAVIEHNLLSASK-LYNNITFEELGALLEIPAA 45 (84)
T ss_dssp CHHHHHHHHHHHHH-SCSEEEHHHHHHHTTSCHH
T ss_pred HHHHHHHHHHHHHH-HHCEEEHHHHHHHHCCCHH
T ss_conf 99999998999988-3025669999999787999
No 202
>d1sfua_ a.4.5.19 (A:) 34L {Yaba-like disease virus, YLDV [TaxId: 132475]}
Probab=25.86 E-value=16 Score=13.20 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHCC-CCCCCHHHHHHHHCCCHHHHHC
Q ss_conf 9999999998749-1035479999984778545540
Q T0575 17 LIDVLLDEFAQND-YDSVSINRITERAGIAKGSFYQ 51 (216)
Q Consensus 17 Il~aA~~lf~~~G-~~~~t~~~IA~~agvs~~tiY~ 51 (216)
|.+-....+..-| =+++|-.+||++.|+++..+-+
T Consensus 8 i~~lvk~~l~~L~~~~~~tA~~LAk~Lg~~Kk~VNr 43 (70)
T d1sfua_ 8 IFSLVKKEVLSLNTNDYTTAISLSNRLKINKKKINQ 43 (70)
T ss_dssp HHHHHHHHHHTSCTTCEECHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHH
T ss_conf 999999999745877770499999995988989889
No 203
>d1rr7a_ a.4.1.14 (A:) Middle operon regulator, Mor {Bacteriophage Mu [TaxId: 10677]}
Probab=25.74 E-value=16 Score=13.18 Aligned_cols=50 Identities=16% Similarity=0.076 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH
Q ss_conf 99999999999874910354799999847785455402688889999999
Q T0575 15 SRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFADKKDCYLYLI 64 (216)
Q Consensus 15 ~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sKe~L~~~~~ 64 (216)
..|.+.....+.+.|.+..--.+++.+.----|.-+-|||..+.+..+.-
T Consensus 7 ~dl~~~~~~~l~~~~~~~~~a~~l~~~l~~~~gG~~lYiP~~~~~~~~~R 56 (94)
T d1rr7a_ 7 AELNDLLRGELSRLGVDPAHSLEIVVAICKHLGGGQVYIPRGQALDSLIR 56 (94)
T ss_dssp HHHHHHHHHHHHHTSSCTTSHHHHHHHHHHHHCSSCCCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHH
T ss_conf 99999999999980856777999999999997994476306088899999
No 204
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima [TaxId: 2336]}
Probab=25.26 E-value=16 Score=13.12 Aligned_cols=26 Identities=4% Similarity=0.172 Sum_probs=19.9
Q ss_pred HHHHCCCCCCCHHHHHHHHCCCHHHH
Q ss_conf 99874910354799999847785455
Q T0575 24 EFAQNDYDSVSINRITERAGIAKGSF 49 (216)
Q Consensus 24 lf~~~G~~~~t~~~IA~~agvs~~ti 49 (216)
-|.=.|....|+.+||+..|||+--+
T Consensus 30 rfGl~~~~~~tl~eI~~~lgiSrERV 55 (87)
T d1ttya_ 30 RYGLLDGKPKTLEEVGQYFNVTRERI 55 (87)
T ss_dssp HHTTTTSSCCCHHHHHHHHTCCHHHH
T ss_pred HCCCCCCCCCCHHHHHHHHCCCHHHH
T ss_conf 72778999688999999959889999
No 205
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.02 E-value=16 Score=13.09 Aligned_cols=41 Identities=15% Similarity=0.398 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 99999999999987491-035479999984778545540268888
Q T0575 14 RSRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 14 r~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
.-.+|+ ..|.++.| +......||...|+|...|-..|.|+-
T Consensus 12 Q~~~Le---~~F~~~~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR 53 (60)
T d1yz8p1 12 QLQQLE---ATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRR 53 (60)
T ss_dssp HHHHHH---HHHTTCSSCCTTTTTHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 999999---999976999867999999987798578899859888
No 206
>d1tc3c_ a.4.1.2 (C:) Transposase tc3a1-65 {Caenorhabditis elegans [TaxId: 6239]}
Probab=24.93 E-value=16 Score=13.20 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 99999999999874910354799999847785455402688
Q T0575 15 SRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFAD 55 (216)
Q Consensus 15 ~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~s 55 (216)
+.=+|.+..| ++|+.++|....-|+-.||+|..|
T Consensus 11 ~aqlDVm~~L-------~~slhemaR~i~rSR~~ir~Yl~~ 44 (51)
T d1tc3c_ 11 RAQLDVMKLL-------NVSLHEMSRKISRSRHCIRVYLKD 44 (51)
T ss_dssp HHHHHHHHHT-------TCCHHHHHHHHTCCHHHHHHHHHC
T ss_pred HHHHHHHHHH-------CCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9988999994-------876999999998859999999569
No 207
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=24.14 E-value=17 Score=12.97 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=27.8
Q ss_pred HHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 9999999987491-03547999998477854554026888
Q T0575 18 IDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 18 l~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
+++-...|.+..| +......||...|++...|-..|.|+
T Consensus 21 ~~~Le~~F~~~~yP~~~~r~~LA~~l~l~~~qV~~WFqNr 60 (77)
T d1vnda_ 21 TYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNH 60 (77)
T ss_dssp HHHHHHHHHHCSCCCHHHHHHHHHHHTCCHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCHHH
T ss_conf 9999999998788999999999997099756613202628
No 208
>d1i3ja_ d.285.1.1 (A:) DNA-binding domain of intron endonuclease I-TevI {Bacteriophage T4 [TaxId: 10665]}
Probab=23.26 E-value=17 Score=12.85 Aligned_cols=48 Identities=6% Similarity=0.025 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHHH-------HHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 87888999999999-------9998749103547999998477854554026888
Q T0575 9 LPEEKRSRLIDVLL-------DEFAQNDYDSVSINRITERAGIAKGSFYQYFADK 56 (216)
Q Consensus 9 ~~ee~r~~Il~aA~-------~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~sK 56 (216)
-++|+++++-++.. .-+.-.|..=.|+.+-|+..||+.+||.+.-.|.
T Consensus 34 HseEtK~K~S~~~kG~k~~~~K~v~IdG~~Y~S~~EAAr~LgIs~~TI~~RiKS~ 88 (96)
T d1i3ja_ 34 HSDITKSKISEKMKGKKPSNIKKISCDGVIFDCAADAARHFKISSGLVTYRVKSD 88 (96)
T ss_dssp CCHHHHHHHHHHHTTCCCTTCCCEEETTEEESSHHHHHHHHTCCHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCEEECCEEECCHHHHHHHCCCCHHHHHHHHCCC
T ss_conf 6988999998885389987554357557571467899987089867855432178
No 209
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.68 E-value=18 Score=12.77 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=28.2
Q ss_pred HHHHHHHCCCC-CCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 99999874910-35479999984778545540268888
Q T0575 21 LLDEFAQNDYD-SVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 21 A~~lf~~~G~~-~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
-...|..+.|- .-....||...|++...|-..|.|+-
T Consensus 17 Le~~F~~~~yPs~~~r~~LA~~l~L~~~~V~~WFqNrR 54 (68)
T d1ftta_ 17 LERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHR 54 (68)
T ss_dssp HHHHHHHSSSCCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCHH
T ss_conf 99999887777789999999984999252425252288
No 210
>d1a9xa2 c.24.1.1 (A:936-1073) Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.49 E-value=18 Score=12.74 Aligned_cols=61 Identities=11% Similarity=0.176 Sum_probs=42.4
Q ss_pred CCCCC--CCCCCHHHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHCCCHHHHHCCCCCHHHHHHH
Q ss_conf 98886--678878889999999999998749103---547999998477854554026888899999
Q T0575 1 MPTET--FFNLPEEKRSRLIDVLLDEFAQNDYDS---VSINRITERAGIAKGSFYQYFADKKDCYLY 62 (216)
Q Consensus 1 Mp~~~--~~~~~ee~r~~Il~aA~~lf~~~G~~~---~t~~~IA~~agvs~~tiY~~F~sKe~L~~~ 62 (216)
+|++. |...++.-|+.+++.|..+ .+.||.= -.+.+.=++.||+...+..-..++..++..
T Consensus 4 lp~~G~v~iSv~d~dK~~~~~~ak~l-~~lGf~i~AT~GTa~~L~~~Gi~~~~v~ki~~~~p~i~d~ 69 (138)
T d1a9xa2 4 MKKHGRALLSVREGDKERVVDLAAKL-LKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDR 69 (138)
T ss_dssp CCSSSEEEEECCGGGGTTHHHHHHHH-HHTTCEEEECHHHHHHHHTTTCCCEECBCTTTCSSBHHHH
T ss_pred CCCCCEEEEEEEHHHHHHHHHHHHHH-HHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 99988799997655366899999999-9879878866864899987224531101346665207678
No 211
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=21.96 E-value=18 Score=12.67 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=38.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHC-----CCCCCCHHHH------HHHHCCCHHHH---HCCCCCHHHHHH
Q ss_conf 67887888999999999999874-----9103547999------99847785455---402688889999
Q T0575 6 FFNLPEEKRSRLIDVLLDEFAQN-----DYDSVSINRI------TERAGIAKGSF---YQYFADKKDCYL 61 (216)
Q Consensus 6 ~~~~~ee~r~~Il~aA~~lf~~~-----G~~~~t~~~I------A~~agvs~~ti---Y~~F~sKe~L~~ 61 (216)
+..|+.+-|.++++++.+....+ |..+.|+++. |+++|..--.+ |++.+|.++++.
T Consensus 50 ~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~s~~~~i~~a~~a~~~Gad~ilv~pP~~~~~s~~~i~~ 119 (292)
T d1xkya1 50 SPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQ 119 (292)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHH
T ss_conf 6669899999999999998189851999357421999999999999849999997898788989999999
No 212
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.86 E-value=18 Score=12.65 Aligned_cols=43 Identities=14% Similarity=0.409 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 9999999999987491-035479999984778545540268888
Q T0575 15 SRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 15 ~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
..+|++....-..+.| ..-....||...|++...|...|.|+-
T Consensus 13 ~~~Le~~f~~~~~~pYPs~~~k~~La~~~gl~~~qv~~WF~N~R 56 (73)
T d1pufb_ 13 TEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKR 56 (73)
T ss_dssp HHHHHHHHHHTTTSCCCCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 99999999984378899999999999997939999699889989
No 213
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]}
Probab=21.79 E-value=19 Score=12.64 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=26.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 6788788899999999999987491035479
Q T0575 6 FFNLPEEKRSRLIDVLLDEFAQNDYDSVSIN 36 (216)
Q Consensus 6 ~~~~~ee~r~~Il~aA~~lf~~~G~~~~t~~ 36 (216)
+.+++++.|+++.+....++.+.|++++-++
T Consensus 96 ~~~~~~~~~~~F~~~~~~~~~~y~lDGiDiD 126 (285)
T d2ebna_ 96 IANLSTARAKAFAQELKNTCDLYNLDGVFFD 126 (285)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEECC
T ss_conf 4457999999999999999997599678606
No 214
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=21.20 E-value=19 Score=12.56 Aligned_cols=37 Identities=19% Similarity=0.450 Sum_probs=26.9
Q ss_pred HHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 9999987491-035479999984778545540268888
Q T0575 21 LLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 21 A~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
-...|..+.| +.-...+||...|++...|-..|.|+-
T Consensus 14 Le~~F~~~~yp~~~~r~~LA~~lgL~~~qV~vWFqNrR 51 (53)
T d1p7ia_ 14 LKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNAR 51 (53)
T ss_dssp HHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCC
T ss_conf 99999887889889999999995978688022041367
No 215
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.07 E-value=19 Score=12.54 Aligned_cols=50 Identities=12% Similarity=0.212 Sum_probs=31.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCCCHHHHHCCCCCHH
Q ss_conf 788788899999999999987491-035479999984778545540268888
Q T0575 7 FNLPEEKRSRLIDVLLDEFAQNDY-DSVSINRITERAGIAKGSFYQYFADKK 57 (216)
Q Consensus 7 ~~~~ee~r~~Il~aA~~lf~~~G~-~~~t~~~IA~~agvs~~tiY~~F~sKe 57 (216)
..+|.+-+ .||+.-......+.| ..-....||...|+|..-|-..|.|+-
T Consensus 7 ~~~~~~~~-~iL~~wf~~~~~nPyPs~~e~~~La~~~~l~~~qI~~WF~N~R 57 (62)
T d1x2na1 7 GVLPKHAT-NVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINAR 57 (62)
T ss_dssp CCCCHHHH-HHHHHHHHHTTTSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 99999999-9999999984548996999999999998909999379889989
No 216
>d1xr4a1 c.124.1.2 (A:1-236) Putative citrate lyase alpha chain, citF2 {Salmonella typhimurium [TaxId: 90371]}
Probab=20.40 E-value=20 Score=12.44 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCHHHHHHHHCCCHH---HHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 547999998477854---5540268888999999999999
Q T0575 33 VSINRITERAGIAKG---SFYQYFADKKDCYLYLIQLGIE 69 (216)
Q Consensus 33 ~t~~~IA~~agvs~~---tiY~~F~sKe~L~~~~~~~~~~ 69 (216)
-|+++..+++|+.-| +|.|||.+-|-++..+++...+
T Consensus 44 ~sl~eai~~~GlkDGMTiSFHHh~R~GD~v~n~Vm~~ia~ 83 (236)
T d1xr4a1 44 DSLEEAIRRSGLKNGMTISFHHAFRGGDKVVNMVMAKLAE 83 (236)
T ss_dssp SSHHHHHHHTTCCTTCEEEECCTTGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEEHHCCCCCHHHHHHHHHHHH
T ss_conf 5399999980886797888531003713789999999997
No 217
>d1a8ya2 c.47.1.3 (A:127-228) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=20.28 E-value=20 Score=12.42 Aligned_cols=44 Identities=7% Similarity=0.013 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCC
Q ss_conf 88899999999999987491035479999984778545540268
Q T0575 11 EEKRSRLIDVLLDEFAQNDYDSVSINRITERAGIAKGSFYQYFA 54 (216)
Q Consensus 11 ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tiY~~F~ 54 (216)
....+..+++|..+-...-|..++=.++++..|++.+++.-|-+
T Consensus 31 ~~~~~~F~~~A~~~rd~~~F~~t~d~~va~~~~v~~~~vvlfr~ 74 (102)
T d1a8ya2 31 SEHYKAFKEAAEEFHPYIPFFATFDSKVAKKLTLKLNEIDFYEA 74 (102)
T ss_dssp CHHHHHHHHHHHHHTTTSCEEEECCHHHHHHHCCCTTCEEEECT
T ss_pred CHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCEEEEEE
T ss_conf 27899999999971777359998879999983999997789611
No 218
>d1rfza_ a.195.1.1 (A:) YutG homologue {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.03 E-value=20 Score=12.38 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=22.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 788899999999999987491035479999984
Q T0575 10 PEEKRSRLIDVLLDEFAQNDYDSVSINRITERA 42 (216)
Q Consensus 10 ~ee~r~~Il~aA~~lf~~~G~~~~t~~~IA~~a 42 (216)
++-....+-+++.+.+.++| +|+++||+-+
T Consensus 5 ~~~~~~~l~~~~~~~L~erG---Vt~~dIa~~v 34 (164)
T d1rfza_ 5 SEFIMNNLEQTARRWLEERG---VTVEKIAELV 34 (164)
T ss_dssp HHHHHTSCHHHHHHHHHHTT---CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCC---CCHHHHHHHH
T ss_conf 78468999999999999869---8899999999
Done!