Query T0576 3NA2, Leptospirillum rubarum, 172 residues
Match_columns 172
No_of_seqs 2 out of 4
Neff 1.1
Searched_HMMs 22458
Date Fri Jun 4 14:23:59 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0576.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0576.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2grg_A Hypothetical protein; Y 96.7 0.0015 6.6E-08 41.9 4.4 22 7-28 7-28 (120)
2 1nc7_A Hypothetical protein TM 96.5 0.00037 1.6E-08 45.7 0.3 20 7-26 7-26 (138)
3 2hg6_A Hypothetical protein; s 96.1 0.00069 3.1E-08 43.9 0.1 23 7-29 7-29 (128)
4 2kku_A Uncharacterized protein 96.1 0.00071 3.2E-08 43.9 0.1 42 6-47 6-50 (161)
5 1zx3_A Hypothetical protein NE 96.1 0.00072 3.2E-08 43.9 0.0 22 7-28 7-28 (122)
6 3mfn_A Uncharacterized protein 95.9 0.00095 4.2E-08 43.1 0.0 22 6-27 6-27 (157)
7 1u83_A Phosphosulfolactate syn 95.8 0.0013 5.7E-08 42.3 0.1 19 6-24 6-24 (276)
8 2aby_A Hypothetical protein TA 95.6 0.0019 8.2E-08 41.3 0.2 23 6-28 6-28 (146)
9 1z1s_A Hypothetical protein PA 95.4 0.0014 6.4E-08 41.9 -0.8 22 6-27 6-27 (163)
10 1t2a_A GDP-mannose 4,6 dehydra 95.2 0.005 2.2E-07 38.5 1.6 42 6-47 6-53 (375)
11 2joi_A Hypothetical protein TA 95.2 0.0051 2.3E-07 38.5 1.6 34 6-39 6-47 (118)
12 2jpi_A Hypothetical protein; a 95.0 0.0032 1.4E-07 39.8 0.1 34 7-40 7-47 (118)
13 2hfq_A Hypothetical protein; A 94.7 0.0031 1.4E-07 39.9 -0.8 24 7-30 7-30 (109)
14 3fxh_A Integron gene cassette 94.6 0.0081 3.6E-07 37.3 1.3 34 7-40 7-40 (135)
15 2js3_A Uncharacterized protein 94.3 0.028 1.2E-06 33.9 3.5 41 6-47 6-46 (96)
16 3eet_A Putative GNTR-family tr 93.9 0.017 7.6E-07 35.2 1.7 43 6-48 6-56 (272)
17 1tjn_A Sirohydrochlorin cobalt 93.7 0.0089 3.9E-07 37.0 -0.0 21 7-27 7-27 (156)
18 3lvy_A Carboxymuconolactone de 93.3 0.012 5.4E-07 36.2 0.1 19 6-24 6-24 (207)
19 2g8y_A Malate/L-lactate dehydr 93.2 0.01 4.6E-07 36.6 -0.3 22 6-27 6-27 (385)
20 2jn4_A Hypothetical protein FI 92.8 0.015 6.9E-07 35.5 0.0 15 7-21 7-21 (87)
21 2gfq_A UPF0204 protein PH0006; 92.6 0.0071 3.2E-07 37.6 -1.8 34 7-40 7-47 (298)
22 2qpv_A Uncharacterized protein 92.5 0.018 7.8E-07 35.2 0.1 19 6-24 6-24 (156)
23 1ywu_A Hypothetical protein PA 92.5 0.014 6.4E-07 35.7 -0.4 92 7-114 7-104 (149)
24 3he1_A Major exported HCP3 pro 92.4 0.019 8.3E-07 35.0 0.0 19 7-25 7-25 (195)
25 2asy_A Protein YDHR precursor; 92.4 0.019 8.5E-07 34.9 0.1 19 7-25 7-25 (123)
26 2akl_A PHNA-like protein PA012 92.1 0.023 1E-06 34.4 0.2 21 7-27 7-27 (138)
27 3d3r_A Hydrogenase assembly ch 92.1 0.069 3.1E-06 31.4 2.6 40 7-70 7-47 (103)
28 3if4_A Integron cassette prote 91.9 0.021 9.5E-07 34.6 -0.1 17 7-23 7-23 (119)
29 2hfv_A Hypothetical protein RP 91.5 0.029 1.3E-06 33.8 0.2 22 6-27 6-27 (97)
30 2qni_A AGR_C_517P, uncharacter 91.5 0.027 1.2E-06 34.0 0.0 16 7-22 7-22 (219)
31 2p06_A Hypothetical protein AF 91.3 0.028 1.3E-06 33.9 0.0 44 6-54 6-49 (114)
32 3fm2_A Uncharacterized protein 91.1 0.83 3.7E-05 24.7 8.7 116 30-147 5-127 (135)
33 3fuy_A HFX_CASS1, putative int 91.0 0.032 1.4E-06 33.5 0.0 18 7-25 7-24 (179)
34 3gem_A Short chain dehydrogena 91.0 0.068 3E-06 31.5 1.7 51 5-55 5-65 (260)
35 2evv_A Hypothetical protein HP 90.5 0.036 1.6E-06 33.2 -0.1 44 7-66 7-50 (207)
36 2i6h_A AGR_C_189P, hypothetica 90.4 0.071 3.1E-06 31.4 1.3 32 7-39 7-38 (207)
37 1yb1_A 17-beta-hydroxysteroid 90.4 0.08 3.6E-06 31.0 1.6 49 6-54 5-68 (272)
38 3jrt_A Integron cassette prote 90.2 0.041 1.8E-06 32.9 -0.0 20 6-25 6-25 (192)
39 2b69_A UDP-glucuronate decarbo 90.1 0.089 4E-06 30.8 1.6 52 6-57 6-68 (343)
40 3kh0_A Ralgds, ralgef, RAL gua 88.9 0.054 2.4E-06 32.1 -0.2 37 7-58 4-40 (140)
41 3c5h_A Glucocorticoid receptor 88.6 0.057 2.5E-06 32.0 -0.3 17 7-23 4-20 (255)
42 3c07_A Putative TETR-family tr 87.9 0.076 3.4E-06 31.2 0.0 21 6-26 6-26 (273)
43 2b94_A Purine nucleoside phosp 87.3 0.044 2E-06 32.6 -1.5 26 6-31 6-31 (267)
44 2kjz_A ATC0852; protein of unk 87.2 0.091 4.1E-06 30.7 0.1 19 7-25 7-25 (144)
45 1xg5_A ARPG836; short chain de 87.0 0.1 4.7E-06 30.3 0.3 49 6-54 5-69 (279)
46 2i3d_A AGR_C_3351P, hypothetic 86.9 0.098 4.4E-06 30.5 0.1 18 7-24 7-24 (249)
47 3bni_A Putative TETR-family tr 86.6 0.1 4.4E-06 30.4 0.0 22 6-27 6-27 (229)
48 2fsr_A Acetyltranferase; alpha 86.5 0.11 4.8E-06 30.3 0.1 20 7-26 7-26 (195)
49 2c43_A Aminoadipate-semialdehy 86.3 0.1 4.5E-06 30.4 -0.1 20 6-25 7-26 (323)
50 2q05_A Late protein H1, dual s 86.1 0.079 3.5E-06 31.1 -0.7 46 6-56 6-51 (195)
51 2qq8_A TBC1 domain family memb 85.8 0.094 4.2E-06 30.6 -0.5 17 7-23 4-20 (334)
52 2id3_A Putative transcriptiona 85.7 0.12 5.3E-06 30.0 0.0 22 6-27 6-27 (225)
53 2k5h_A Conserved protein; stru 85.4 0.13 6E-06 29.6 0.2 61 6-83 6-70 (101)
54 3efz_A 14-3-3 protein; 14-3-3, 84.4 0.18 8E-06 28.8 0.4 33 6-38 6-52 (268)
55 2rbc_A Sugar kinase, AGR_C_456 84.2 0.15 6.8E-06 29.3 0.0 19 6-24 6-24 (343)
56 2fgx_A Putative thioredoxin; N 83.6 0.19 8.5E-06 28.7 0.3 22 7-28 7-28 (107)
57 1tvi_A Hypothetical UPF0054 pr 83.2 0.18 8.1E-06 28.8 0.1 21 7-27 7-27 (172)
58 3g80_A Protein B2; RNA-binding 83.0 0.18 8.1E-06 28.8 0.0 14 12-25 9-22 (97)
59 2nnz_A Hypothetical protein; b 83.0 0.19 8.4E-06 28.7 0.1 20 6-25 6-25 (153)
60 2qkr_A CDC2-like CDK2/CDC28 li 82.9 0.18 8.1E-06 28.8 -0.0 19 7-25 4-22 (313)
61 2q2f_A Selenoprotein S; anti-p 82.5 0.19 8.6E-06 28.6 -0.0 15 8-22 5-19 (89)
62 2qis_A Farnesyl pyrophosphate 82.3 0.34 1.5E-05 27.1 1.1 20 6-25 5-24 (374)
63 2bdd_A ACP-synthase; structura 81.7 0.33 1.5E-05 27.2 0.9 29 7-35 7-41 (182)
64 3ju1_A Enoyl-COA hydratase/iso 81.5 0.22 1E-05 28.2 0.0 38 6-48 6-43 (407)
65 3iez_A RAS GTPase-activating-l 80.7 0.25 1.1E-05 27.9 0.0 23 7-29 4-26 (114)
66 3c6v_A Probable tautomerase/de 80.5 0.22 9.9E-06 28.3 -0.3 16 6-21 6-21 (161)
67 2f4z_A Tgtwinscan_2721 - E2 do 80.4 2.1 9.3E-05 22.2 4.7 35 6-40 6-46 (193)
68 1p8c_A Conserved hypothetical 80.1 0.27 1.2E-05 27.8 0.0 21 6-26 6-26 (145)
69 3f0n_A Mevalonate pyrophosphat 79.8 0.24 1.1E-05 28.0 -0.3 65 7-96 4-73 (414)
70 3f6v_A Possible transcriptiona 79.1 0.3 1.3E-05 27.5 0.0 23 7-29 7-29 (151)
71 3kkw_A Putative uncharacterize 78.9 0.4 1.8E-05 26.7 0.6 22 5-26 5-26 (182)
72 2kdn_A Putative uncharacterize 78.6 1.6 7.1E-05 22.9 3.6 43 7-51 7-49 (108)
73 1k7k_A Hypothetical protein YG 78.6 0.37 1.6E-05 26.9 0.3 19 6-24 6-24 (221)
74 2qko_A Possible transcriptiona 78.5 0.77 3.4E-05 24.9 2.0 55 6-60 6-71 (215)
75 3kye_A Roadblock/LC7 domain, R 78.1 0.61 2.7E-05 25.5 1.3 22 6-27 6-27 (150)
76 3eap_A RHO GTPase-activating p 78.1 0.28 1.2E-05 27.7 -0.5 31 7-40 4-34 (271)
77 2i71_A Hypothetical protein; s 78.0 0.31 1.4E-05 27.4 -0.2 17 6-22 6-22 (400)
78 2hxi_A Putative transcriptiona 77.7 0.81 3.6E-05 24.8 1.8 44 6-49 6-53 (241)
79 3dci_A Arylesterase; SGNH_hydr 77.4 0.37 1.7E-05 26.9 0.1 21 6-26 6-26 (232)
80 2of7_A Putative TETR-family tr 77.3 0.36 1.6E-05 26.9 0.0 20 6-25 8-27 (260)
81 2ki8_A Tungsten formylmethanof 76.7 0.44 2E-05 26.4 0.3 19 6-24 6-24 (146)
82 2v7s_A Probable conserved lipo 75.8 0.42 1.9E-05 26.5 0.0 19 8-26 16-34 (215)
83 3drw_A ADP-specific phosphofru 75.6 0.38 1.7E-05 26.8 -0.3 22 6-27 6-27 (474)
84 1rcu_A Conserved hypothetical 75.6 0.82 3.6E-05 24.7 1.4 44 6-52 6-68 (195)
85 2q0v_A Ubiquitin-conjugating e 75.3 0.38 1.7E-05 26.8 -0.3 18 7-24 4-21 (156)
86 2omo_A DUF176; structural geno 74.7 0.43 1.9E-05 26.4 -0.2 18 6-23 6-23 (124)
87 2f6i_A ATP-dependent CLP prote 74.5 1.9 8.6E-05 22.4 3.1 50 6-55 6-82 (215)
88 2her_A Fragment, farnesyl pyro 73.1 0.62 2.7E-05 25.5 0.3 21 6-26 6-26 (368)
89 3kuz_A Plexin-C1; structural g 71.8 0.53 2.3E-05 25.9 -0.3 17 7-23 4-20 (126)
90 3khd_A Pyruvate kinase; malari 70.2 0.69 3.1E-05 25.2 0.0 47 7-53 4-83 (520)
91 3byv_A Rhoptry kinase; malaria 69.2 0.72 3.2E-05 25.1 -0.1 16 7-22 4-19 (377)
92 1t1j_A Hypothetical protein; s 67.9 0.86 3.8E-05 24.6 0.1 85 16-108 1-105 (125)
93 3g7r_A Putative transcriptiona 67.8 0.61 2.7E-05 25.5 -0.7 44 6-49 6-59 (221)
94 2pus_A IBDV VP1 RNA-dependant 67.8 1.5 6.8E-05 23.0 1.3 46 117-167 443-493 (852)
95 2r6i_A AGR_C_2717P, uncharacte 67.7 0.37 1.6E-05 26.9 -1.8 16 6-21 6-21 (284)
96 2wb6_A AFV1-102; archaeal viru 67.4 2 8.8E-05 22.3 1.8 36 7-42 15-55 (130)
97 3feh_A Centaurin-alpha-1; stru 66.8 0.41 1.8E-05 26.6 -1.8 25 9-40 6-30 (386)
98 2kkn_A Uncharacterized protein 66.5 0.93 4.2E-05 24.4 0.0 139 7-165 7-157 (178)
99 2ali_A Hypothetical protein PA 66.2 0.94 4.2E-05 24.3 0.0 20 7-26 7-26 (158)
100 2p82_A Cysteine protease ATG4A 64.9 1 4.6E-05 24.1 0.0 15 7-21 4-18 (355)
101 3con_A GTPase NRAS; structural 64.2 0.94 4.2E-05 24.4 -0.3 18 7-24 4-21 (190)
102 3bn7_A Ferredoxin-like protein 64.2 2.8 0.00013 21.3 2.1 29 13-41 11-47 (120)
103 2igt_A SAM dependent methyltra 63.9 0.77 3.4E-05 24.9 -0.8 25 6-30 6-30 (332)
104 3ded_A Probable hemolysin; str 62.9 1.2 5.3E-05 23.7 0.0 18 7-24 7-24 (113)
105 2o9x_A Reductase, assembly pro 62.7 0.99 4.4E-05 24.2 -0.4 19 6-24 6-24 (181)
106 3mea_A SAGA-associated factor 62.4 0.87 3.9E-05 24.6 -0.7 79 9-99 5-88 (180)
107 2htd_A Predicted flavin-nucleo 62.0 2.2 9.8E-05 22.0 1.3 41 12-53 10-50 (140)
108 3eo3_A Bifunctional UDP-N-acet 61.8 1.3 5.9E-05 23.4 0.1 17 7-23 4-20 (333)
109 3iug_A RHO/CDC42/RAC GTPase-ac 61.5 1.3 5.7E-05 23.5 -0.0 17 7-23 4-20 (229)
110 3b8l_A Uncharacterized protein 61.5 3.3 0.00015 21.0 2.0 27 11-38 9-37 (163)
111 3c5c_A RAS-like protein 12; GD 61.1 1.2 5.2E-05 23.8 -0.3 21 7-27 4-24 (187)
112 2qng_A Uncharacterized protein 60.3 1.4 6.3E-05 23.3 0.0 22 6-27 6-27 (199)
113 3erp_A Putative oxidoreductase 59.9 0.7 3.1E-05 25.1 -1.6 18 6-23 6-23 (353)
114 3kul_A Ephrin type-A receptor 59.8 1.4 6.4E-05 23.2 0.0 18 7-24 4-21 (325)
115 1njk_A Hypothetical protein YB 59.6 0.9 4E-05 24.5 -1.1 26 6-31 6-31 (156)
116 2jpf_A Hypothetical protein; a 59.6 1.5 6.5E-05 23.1 0.0 17 7-23 7-23 (127)
117 3ec7_A Putative dehydrogenase; 59.5 1.5 6.6E-05 23.1 0.0 56 6-62 6-73 (357)
118 3k3s_A Altronate hydrolase; st 58.8 1.5 6.8E-05 23.0 -0.0 15 7-21 7-21 (105)
119 3i9s_A Integron cassette prote 58.1 1.6 7.2E-05 22.9 0.0 35 6-40 6-46 (183)
120 2ihi_A Pyrophosphate synthase; 57.8 1.6 7.3E-05 22.8 0.0 17 7-23 6-22 (395)
121 3e77_A Phosphoserine aminotran 57.7 0.61 2.7E-05 25.5 -2.2 42 10-51 11-54 (377)
122 3bb5_A Stress responsive alpha 56.9 1.7 7.7E-05 22.7 -0.0 11 13-23 11-21 (121)
123 3fyn_A Integron gene cassette 56.9 3.6 0.00016 20.7 1.6 36 6-41 6-47 (176)
124 3fk2_A Glucocorticoid receptor 56.7 1.8 7.8E-05 22.6 0.0 17 7-23 4-20 (246)
125 3bch_A 40S ribosomal protein S 56.7 2.5 0.00011 21.7 0.8 129 8-154 15-161 (253)
126 3dzo_A Rhoptry kinase domain; 55.9 3.9 0.00017 20.5 1.7 33 7-39 4-36 (413)
127 3k0b_A Predicted N6-adenine-sp 55.6 1.5 6.5E-05 23.1 -0.6 27 11-37 1-35 (393)
128 2r6o_A Putative diguanylate cy 54.6 2 8.9E-05 22.3 0.0 18 6-23 6-23 (294)
129 3f4a_A Uncharacterized protein 54.1 1.8 7.8E-05 22.6 -0.3 45 6-50 6-61 (169)
130 3ihw_A Centg3; RAS, centaurin, 53.8 1.9 8.4E-05 22.5 -0.2 16 7-22 4-19 (184)
131 3e6q_A Putative 5-carboxymethy 53.6 1.9 8.4E-05 22.5 -0.3 15 7-21 7-21 (146)
132 3gg8_A Pyruvate kinase; malari 53.5 3.4 0.00015 20.9 1.0 48 7-54 4-74 (511)
133 2buj_A Serine/threonine-protei 52.7 3 0.00014 21.2 0.7 19 6-24 6-24 (317)
134 3eoz_A Putative phosphoglycera 51.3 2.5 0.00011 21.7 0.0 16 8-23 5-20 (214)
135 3lzk_A Fumarylacetoacetate hyd 51.3 2.2 9.8E-05 22.1 -0.2 16 6-21 6-21 (359)
136 3fy6_A Integron cassette prote 51.1 2.3 0.0001 21.9 -0.1 11 14-24 1-11 (126)
137 1rwu_A Hypothetical UPF0250 pr 50.7 2.9 0.00013 21.3 0.3 24 7-30 7-30 (109)
138 3h1n_A Probable glutathione S- 50.6 1.8 7.9E-05 22.6 -0.8 15 7-21 5-19 (252)
139 3fm8_A Kinesin-like protein KI 50.3 2.6 0.00011 21.6 0.0 81 8-97 5-88 (124)
140 3ghj_A Putative integron gene 50.3 2.6 0.00011 21.6 0.0 17 6-22 6-22 (141)
141 3e8x_A Putative NAD-dependent 50.2 4.7 0.00021 20.0 1.4 57 6-62 6-66 (236)
142 3jzy_A Intersectin 2; C2 domai 50.2 2.6 0.00012 21.6 0.0 35 7-41 4-38 (510)
143 3f5r_A FACT complex subunit PO 49.8 2.5 0.00011 21.7 -0.1 19 6-24 6-24 (191)
144 3c3r_A Programmed cell death 6 49.4 2.7 0.00012 21.5 0.0 12 14-25 13-24 (380)
145 3h8m_A Ephrin type-A receptor 49.0 3 0.00013 21.2 0.2 18 8-25 5-22 (90)
146 2ayv_A Ubiquitin-conjugating e 49.0 3.3 0.00015 20.9 0.4 38 6-48 6-43 (166)
147 2nq3_A Itchy homolog E3 ubiqui 48.9 2.8 0.00012 21.4 0.0 21 7-27 4-24 (173)
148 3hk4_A MLR7391 protein; NP_107 48.8 6.9 0.00031 18.9 2.0 27 12-42 10-36 (136)
149 3k21_A PFCDPK3, calcium-depend 48.6 1.4 6.3E-05 23.2 -1.5 16 7-22 4-19 (191)
150 3bde_A MLL5499 protein; NP_106 48.2 2.8 0.00012 21.4 -0.1 12 13-24 11-22 (120)
151 3epz_A DNA (cytosine-5)-methyl 47.4 3 0.00013 21.2 -0.0 17 7-23 4-20 (268)
152 2i32_A Anti-silencing factor 1 47.1 3.2 0.00014 21.1 0.1 15 11-25 14-28 (182)
153 2k2p_A Uncharacterized protein 47.0 3.1 0.00014 21.1 0.0 17 6-22 6-22 (85)
154 2i32_E Histone regulatory homo 47.0 3.1 0.00014 21.1 0.0 29 14-42 1-29 (57)
155 2hga_A Conserved protein MTH13 46.9 3.3 0.00015 20.9 0.2 22 6-27 6-27 (125)
156 1tf1_A Negative regulator of a 46.4 1.5 6.6E-05 23.1 -1.7 42 6-50 6-50 (198)
157 2fgy_A Carboxysome shell polyp 46.1 3.3 0.00015 21.0 0.0 17 12-28 15-31 (542)
158 3cxg_A Putative thioredoxin; m 46.1 3.8 0.00017 20.5 0.4 16 7-22 4-19 (133)
159 3fhm_A Uncharacterized protein 46.0 2.7 0.00012 21.5 -0.4 24 5-29 5-28 (165)
160 2a2c_A N-acetylgalactosamine k 44.9 3.5 0.00016 20.8 0.0 47 13-61 11-70 (478)
161 3llu_A RAS-related GTP-binding 44.9 3.5 0.00016 20.8 0.0 16 7-22 4-19 (196)
162 3kdw_A Putative sugar binding 44.7 3.4 0.00015 20.8 -0.1 16 11-26 9-24 (221)
163 1lql_A OSMC, osmotical inducib 44.1 3.7 0.00016 20.7 -0.0 17 11-27 14-30 (166)
164 3i3c_A Chromobox protein homol 43.7 4.2 0.00019 20.3 0.3 15 11-25 1-15 (75)
165 2q37_A OHCU decarboxylase; 2-O 42.5 4 0.00018 20.4 0.0 16 11-26 9-24 (181)
166 2poy_A 20K cyclophilin, putati 42.4 4 0.00018 20.4 -0.0 16 7-22 4-19 (186)
167 3g0k_A Putative membrane prote 42.3 11 0.00047 17.8 2.1 30 12-41 10-39 (148)
168 2jq4_A AGR_C_4658P, hypothetic 41.8 4.1 0.00018 20.4 -0.0 25 6-30 6-30 (105)
169 3gk6_A Integron cassette prote 41.5 6.5 0.00029 19.1 0.9 16 6-21 6-21 (170)
170 3cxl_A N-chimerin; SH2, RHO-GA 41.2 4.3 0.00019 20.2 -0.0 31 7-41 4-34 (463)
171 2r2o_A Plexin-B1; effector dom 41.2 4.3 0.00019 20.2 0.0 17 8-24 5-21 (138)
172 2keo_A Probable E3 ubiquitin-p 40.7 4.9 0.00022 19.9 0.2 42 7-49 4-45 (112)
173 3lxx_A GTPase IMAP family memb 39.7 4.7 0.00021 20.0 0.0 16 7-22 4-19 (239)
174 2bb3_A Cobalamin biosynthesis 39.4 4.5 0.0002 20.1 -0.1 18 6-23 6-23 (221)
175 2kdb_A Homocysteine-responsive 38.8 5 0.00022 19.8 0.0 18 6-23 6-23 (99)
176 3is5_A Calcium-dependent prote 38.3 4.5 0.0002 20.1 -0.3 18 7-24 4-21 (285)
177 3lxw_A GTPase IMAP family memb 38.1 5.2 0.00023 19.7 0.0 18 7-24 4-21 (247)
178 3isu_A RAS GTPase-activating-l 37.9 4.7 0.00021 20.0 -0.3 18 7-24 4-21 (121)
179 3ied_A Heat shock protein; HSP 37.5 5.5 0.00025 19.5 0.1 18 6-23 6-23 (272)
180 2kgy_A RV0603 protein, possibl 37.4 2.1 9.4E-05 22.1 -2.1 14 11-24 14-27 (102)
181 1ytv_M V1AR, vasopressin V1A r 36.9 6.8 0.0003 19.0 0.5 22 13-34 17-38 (84)
182 2f6s_A Cell filamentation prot 36.7 4.9 0.00022 19.9 -0.3 59 6-68 6-77 (201)
183 3igo_A Calmodulin-domain prote 36.5 5.4 0.00024 19.6 -0.1 17 7-23 4-20 (486)
184 2pmy_A RAS and EF-hand domain- 36.3 5.7 0.00026 19.4 0.0 18 7-24 4-21 (91)
185 3fkm_X Signaling protein; brom 36.1 5.1 0.00023 19.8 -0.3 18 7-24 4-21 (166)
186 2guh_A Putative TETR-family tr 35.9 5.9 0.00026 19.4 0.0 23 6-28 6-28 (214)
187 3fgn_A Dethiobiotin synthetase 35.8 5.2 0.00023 19.7 -0.3 33 12-44 15-57 (251)
188 2wam_A RV2714, conserved hypot 35.6 6 0.00027 19.3 0.0 20 8-27 16-35 (351)
189 3bkp_A Cyclophilin; malaria, i 35.6 5.4 0.00024 19.6 -0.2 43 7-49 4-67 (232)
190 2wei_A Calmodulin-domain prote 34.6 2.6 0.00011 21.6 -2.0 17 7-23 4-20 (287)
191 3cps_A Glyceraldehyde 3-phosph 34.6 11 0.00048 17.7 1.2 71 7-77 4-86 (354)
192 2pwq_A Ubiquitin conjugating e 34.3 13 0.00058 17.2 1.6 34 6-42 6-39 (216)
193 2r8w_A AGR_C_1641P; APC7498, d 34.2 6.5 0.00029 19.1 0.0 17 6-22 6-22 (332)
194 3cbq_A GTP-binding protein REM 33.3 6.9 0.00031 19.0 0.0 19 7-25 4-22 (195)
195 3dz8_A RAS-related protein RAB 32.4 7.6 0.00034 18.7 0.1 19 7-25 4-22 (191)
196 2k48_A Nucleoprotein; viral pr 32.3 6.8 0.0003 19.0 -0.2 20 11-31 18-37 (107)
197 3bv6_A Metal-dependent hydrola 31.6 9.2 0.00041 18.2 0.4 30 11-40 12-42 (379)
198 3dr4_A Putative perosamine syn 30.8 12 0.00055 17.4 1.0 55 13-71 11-82 (391)
199 3fiw_A Putative TETR-family tr 30.7 20 0.00089 16.0 2.0 43 6-49 6-49 (211)
200 2qfz_A TBC1 domain family memb 30.6 8.1 0.00036 18.5 0.0 19 7-25 4-22 (345)
201 3led_A 3-oxoacyl-acyl carrier 30.4 7.6 0.00034 18.7 -0.2 18 6-23 6-23 (392)
202 1kqr_A VP4; spike protein, out 30.0 8.4 0.00037 18.4 0.0 50 11-64 5-57 (179)
203 3bor_A Human initiation factor 30.0 8.4 0.00038 18.4 0.0 16 7-22 4-19 (237)
204 3m2o_A Glyoxalase/bleomycin re 29.9 8.5 0.00038 18.4 0.0 20 6-25 6-25 (164)
205 2aua_A Hypothetical protein; d 29.5 9.7 0.00043 18.0 0.3 55 28-82 105-174 (224)
206 2iai_A Putative transcriptiona 29.2 4 0.00018 20.4 -1.8 43 6-48 6-53 (230)
207 2hmc_A AGR_L_411P, dihydrodipi 29.0 6.8 0.0003 19.0 -0.6 19 6-24 6-24 (344)
208 2fgc_A Acetolactate synthase, 28.6 4.9 0.00022 19.9 -1.4 21 6-26 6-26 (193)
209 3dlo_A Universal stress protei 27.9 10 0.00047 17.8 0.2 47 6-52 6-65 (155)
210 2poe_A Cyclophilin-like protei 27.9 22 0.00096 15.8 1.8 47 7-54 4-66 (185)
211 3kuq_A RHO GTPase-activating p 27.4 7.7 0.00034 18.6 -0.6 18 7-24 4-21 (228)
212 2hrz_A AGR_C_4963P, nucleoside 27.0 21 0.00095 15.9 1.6 34 9-42 2-38 (342)
213 3czu_B Ephrin-A1; ATP-binding, 26.9 10 0.00047 17.8 0.0 15 12-26 15-29 (182)
214 2kr1_A Ubiquitin protein ligas 26.5 22 0.001 15.7 1.7 34 8-42 5-38 (82)
215 2oni_A E3 ubiquitin-protein li 26.4 7.3 0.00032 18.8 -0.8 17 7-23 4-20 (392)
216 3lij_A Calcium/calmodulin depe 26.0 9.4 0.00042 18.1 -0.3 20 7-26 4-23 (494)
217 3kka_C Ephrin type-A receptor 26.0 8.1 0.00036 18.5 -0.7 32 7-38 4-35 (86)
218 3hko_A Calcium/calmodulin-depe 25.9 9.4 0.00042 18.1 -0.4 17 7-23 4-20 (345)
219 3f7x_A Putative polyketide cyc 25.2 11 0.00051 17.6 -0.0 14 11-24 9-22 (151)
220 1s3l_A Hypothetical protein MJ 24.4 11 0.00048 17.7 -0.3 59 12-70 15-84 (190)
221 2klc_A Ubiquilin-1; ubiquitin- 23.9 13 0.00056 17.3 0.0 19 6-24 6-24 (101)
222 3hil_A Ephrin type-A receptor 23.8 14 0.00063 17.0 0.2 25 8-32 5-31 (82)
223 3i3g_A N-acetyltransferase; ma 22.9 14 0.00061 17.1 0.0 16 7-22 4-19 (161)
224 1x7f_A Outer surface protein; 22.7 37 0.0016 14.4 3.8 64 11-74 12-101 (385)
225 3ess_A Cholix toxin; ADP-ribos 22.6 12 0.00054 17.4 -0.3 37 11-47 10-55 (230)
226 2k3m_A RV1761C; protein, integ 22.1 14 0.00064 16.9 0.0 24 11-34 12-40 (151)
227 3m6y_A 4-hydroxy-2-oxoglutarat 21.7 20 0.00089 16.0 0.7 41 11-58 12-53 (275)
228 2aj4_A Galactokinase; galactos 21.5 15 0.00067 16.8 0.0 46 13-60 11-79 (548)
229 2k7i_A UPF0339 protein ATU0232 21.3 15 0.00068 16.8 0.0 37 7-53 7-44 (83)
230 2wzp_P Lactococcal phage P2 OR 21.2 15 0.00068 16.8 -0.0 10 12-21 20-29 (326)
231 3k5i_A Phosphoribosyl-aminoimi 21.0 16 0.00072 16.6 0.1 37 13-49 11-54 (403)
232 2or0_A Hydroxylase; APC7385, r 21.0 16 0.0007 16.7 0.0 18 6-23 6-23 (414)
233 2ekg_A Proline dehydrogenase/d 20.7 18 0.00082 16.3 0.3 20 12-31 10-29 (327)
234 3f09_A Holo-[acyl-carrier-prot 20.0 15 0.00068 16.8 -0.2 26 9-34 10-42 (143)
No 1
>2grg_A Hypothetical protein; YNR034W-AP; helix/beta strand protein, structural genomics, PSI, protein structure initiative; NMR {Saccharomyces cerevisiae} SCOP: d.110.10.1
Probab=96.69 E-value=0.0015 Score=41.89 Aligned_cols=22 Identities=73% Similarity=1.331 Sum_probs=18.5
Q ss_pred CCCCCCCCCCEEEEEECCCCHH
Q ss_conf 2112455431057640274124
Q T0576 7 HHHHSSGRENLYFQGHVEPGVT 28 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vt 28 (172)
....|||||||||||||.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~s~~ 28 (120)
T 2grg_A 7 HHHHSSGRENLYFQGHMKSSIP 28 (120)
T ss_dssp ----------------CCCCEE
T ss_pred CCCCCCCCCCEEEECCCCCCCC
T ss_conf 3324577420577200125661
No 2
>1nc7_A Hypothetical protein TM1070; structural genomics, molecular propeller, PSI, protein structure initiative; 1.55A {Thermotoga maritima} SCOP: b.123.1.1
Probab=96.50 E-value=0.00037 Score=45.66 Aligned_cols=20 Identities=80% Similarity=1.375 Sum_probs=16.6
Q ss_pred CCCCCCCCCCEEEEEECCCC
Q ss_conf 21124554310576402741
Q T0576 7 HHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~ 26 (172)
....|||||||||||||.-+
T Consensus 7 ~~~~~~~~~~~~~~~hm~G~ 26 (138)
T 1nc7_A 7 HHHHSSGRENLYFQGHMNGA 26 (138)
T ss_dssp ---------------CCCSE
T ss_pred CCCCCCCCCEEEEECCCCCC
T ss_conf 33245774205775013787
No 3
>2hg6_A Hypothetical protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pseudomonas aeruginosa} SCOP: d.364.1.1
Probab=96.14 E-value=0.00069 Score=43.95 Aligned_cols=23 Identities=78% Similarity=1.238 Sum_probs=18.0
Q ss_pred CCCCCCCCCCEEEEEECCCCHHH
Q ss_conf 21124554310576402741246
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTD 29 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtd 29 (172)
....|||||||||||||.-.-.|
T Consensus 7 ~~~~~~~~~~~~~~~~M~ITS~~ 29 (128)
T 2hg6_A 7 HHHHSSGRENLYFQGHMSITSTD 29 (128)
T ss_dssp ----------------CCCCCGG
T ss_pred CCCCCCCCCCEEEEEEEEECHHH
T ss_conf 43345764323674033210999
No 4
>2kku_A Uncharacterized protein; alpha/beta protein, structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus}
Probab=96.12 E-value=0.00071 Score=43.87 Aligned_cols=42 Identities=57% Similarity=0.948 Sum_probs=25.6
Q ss_pred CCCCCCCCCCCEEEEEECCC--CHHHHHHHH-HHHHHHCCEEEEE
Q ss_conf 42112455431057640274--124688999-9999736816887
Q T0576 6 HHHHHSSGRENLYFQGHVEP--GVTDRIGQM-ILEMFRTGMCLFS 47 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~--~vtdrig~m-ilemfr~gmclfs 47 (172)
.....|||||||||||||.. |||--+-.- .-..|..|--.|-
T Consensus 6 ~~~~~~~~~~~~~~~~~ms~IvGVtfPVP~~~l~R~Fk~gK~VFv 50 (161)
T 2kku_A 6 HHHHHSSGRENLYFQGHMSKIVGVTYPIPKRFMDRFFKKGKDVFV 50 (161)
T ss_dssp -----------------CTTCEEEEECCSSSTTHHHHHHSCEEEE
T ss_pred CCCCCCCCCCCEEEECCCHHEEEEECCCCHHHHHHHHHCCCEEEE
T ss_conf 443345764305761210110355504939999999734881897
No 5
>1zx3_A Hypothetical protein NE0241; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: a.43.1.6
Probab=96.10 E-value=0.00072 Score=43.85 Aligned_cols=22 Identities=73% Similarity=1.197 Sum_probs=17.6
Q ss_pred CCCCCCCCCCEEEEEECCCCHH
Q ss_conf 2112455431057640274124
Q T0576 7 HHHHSSGRENLYFQGHVEPGVT 28 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vt 28 (172)
....|||||||||||||..+-.
T Consensus 7 hhhhssgrenlyfqghmgkkkn 28 (122)
T 1zx3_A 7 HHHHSSGRENLYFQGHMGKKKN 28 (122)
T ss_dssp ----------------------
T ss_pred CCCCCCCCCCEEEECCCCCCCC
T ss_conf 4334577432465322254446
No 6
>3mfn_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE; 2.02A {Dyadobacter fermentans}
Probab=95.94 E-value=0.00095 Score=43.08 Aligned_cols=22 Identities=77% Similarity=1.254 Sum_probs=17.4
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....|||||||||||||-.+-
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~ 27 (157)
T 3mfn_A 6 HHHHHSSGRENLYFQGHMIKKQ 27 (157)
T ss_dssp ----------------------
T ss_pred CCCCCCCCCCCEEEEHHHHHHH
T ss_conf 3333456642102200146576
No 7
>1u83_A Phosphosulfolactate synthase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=95.77 E-value=0.0013 Score=42.28 Aligned_cols=19 Identities=89% Similarity=1.571 Sum_probs=15.9
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....|||||||||||||.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~ 24 (276)
T 1u83_A 6 HHHHHSSGRENLYFQGHMN 24 (276)
T ss_dssp -------------------
T ss_pred CCCCCCCCCCCEEEECCCC
T ss_conf 4433456642122310002
No 8
>2aby_A Hypothetical protein TA0743; helix-turn-helix, unknown function; NMR {Thermoplasma acidophilum}
Probab=95.55 E-value=0.0019 Score=41.27 Aligned_cols=23 Identities=74% Similarity=1.331 Sum_probs=19.0
Q ss_pred CCCCCCCCCCCEEEEEECCCCHH
Q ss_conf 42112455431057640274124
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVT 28 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vt 28 (172)
.....||||||||||.||+.|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~M~rGlE 28 (146)
T 2aby_A 6 HHHHHSSGRENLYFQSHMQKGLE 28 (146)
T ss_dssp -----------------CCCSSC
T ss_pred CCCCCCCCCCHHHHHHHHHCCCE
T ss_conf 43334566302548888736735
No 9
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=95.37 E-value=0.0014 Score=41.94 Aligned_cols=22 Identities=77% Similarity=1.316 Sum_probs=18.0
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....|+|+|||||||+|+.+-
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~e 27 (163)
T 1z1s_A 6 HHHHHSSGRENLYFQGHMNAKE 27 (163)
T ss_dssp ----------CTTSCCCCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHH
T ss_conf 4432222334311346578999
No 10
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=95.25 E-value=0.005 Score=38.55 Aligned_cols=42 Identities=50% Similarity=0.901 Sum_probs=31.0
Q ss_pred CCCCCCCCCCCEEEEEECCC-----CHHHHHHHHHHHHH-HCCEEEEE
Q ss_conf 42112455431057640274-----12468899999997-36816887
Q T0576 6 HHHHHSSGRENLYFQGHVEP-----GVTDRIGQMILEMF-RTGMCLFS 47 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~-----~vtdrig~milemf-r~gmclfs 47 (172)
.....||||||+||||||.. |.|--||..+.+.+ ..|.-.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~Mkk~~LITGatGfIGs~l~~~Ll~~g~~V~~ 53 (375)
T 1t2a_A 6 HHHHHSSGRENKYFQGHMRNVALITGITGQDGSYLAEFLLEKGYEVHG 53 (375)
T ss_dssp ------------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEE
T ss_conf 544356886423455179986999707528999999999978498999
No 11
>2joi_A Hypothetical protein TA0095; structural genomics, COG4004 orthologous group, structural genomics consortium, SGC, unknown function; NMR {Thermoplasma acidophilum}
Probab=95.22 E-value=0.0051 Score=38.51 Aligned_cols=34 Identities=62% Similarity=0.915 Sum_probs=26.5
Q ss_pred CCCCCCCCCCCEEEEEECCC--------CHHHHHHHHHHHHH
Q ss_conf 42112455431057640274--------12468899999997
Q T0576 6 HHHHHSSGRENLYFQGHVEP--------GVTDRIGQMILEMF 39 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~--------~vtdrig~milemf 39 (172)
.....||||||||||+||+. +-.++|.+++-+.|
T Consensus 6 ~~~~~~~~~e~l~~~~~M~~y~vKRG~~k~~e~l~~l~~e~F 47 (118)
T 2joi_A 6 HHHHHSSGRENLYFQGHMREYPVKKGFPTDYDSIKRKISELG 47 (118)
T ss_dssp -----------------CEEECCCSSSCCSHHHHHHHHHHHT
T ss_pred CCCCCCCCCCEEEEHHHCEECCCCCCCCCCHHHHHHHHHHHC
T ss_conf 443346775443502200011243678678779999999965
No 12
>2jpi_A Hypothetical protein; alpha-helix/beta-sheet, structural genomics, ontario centre for structural proteomics, OCSP; NMR {Pseudomonas aeruginosa}
Probab=95.02 E-value=0.0032 Score=39.81 Aligned_cols=34 Identities=50% Similarity=0.796 Sum_probs=23.4
Q ss_pred CCCCCCCCCCEEEEEECCCC-------HHHHHHHHHHHHHH
Q ss_conf 21124554310576402741-------24688999999973
Q T0576 7 HHHHSSGRENLYFQGHVEPG-------VTDRIGQMILEMFR 40 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~-------vtdrig~milemfr 40 (172)
....||||||||||+||-.- -..|+.+-+..-|.
T Consensus 7 ~~~~~~~~~~~~~~~~M~~S~A~v~T~~asRYl~qLckHf~ 47 (118)
T 2jpi_A 7 HHHHSSGRENLYFQGHMFRSTSHVRTESAARYVNRLCKHWG 47 (118)
T ss_dssp ----------------CEEEEEEECCSSHHHHHHHHHHHTT
T ss_pred CCCCCCCCCEEEEECCEEEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 33246775247996233778999867788899999998862
No 13
>2hfq_A Hypothetical protein; A/B protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Nitrosomonas europaea} SCOP: d.375.1.1
Probab=94.67 E-value=0.0031 Score=39.90 Aligned_cols=24 Identities=75% Similarity=1.200 Sum_probs=19.7
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHH
Q ss_conf 211245543105764027412468
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDR 30 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdr 30 (172)
....||||||||||++|+-.|-|.
T Consensus 7 ~~~~~~~~~~~~~~~~MeI~VyDT 30 (109)
T 2hfq_A 7 HHHHSSGRENLYFQGHMQIHVYDT 30 (109)
T ss_dssp ----------------CEEEEEEE
T ss_pred CCCCCCCCHHHHHHCCCEEEEEEE
T ss_conf 332356503256653755999875
No 14
>3fxh_A Integron gene cassette protein HFX_CASS2; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.84A {Uncultured bacterium}
Probab=94.63 E-value=0.0081 Score=37.27 Aligned_cols=34 Identities=56% Similarity=0.890 Sum_probs=26.4
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 2112455431057640274124688999999973
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFR 40 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr 40 (172)
....|||||||||||--....|..+-..|-|..|
T Consensus 7 hhhhssgrenlyfqgmnnkhatsavheiireicr 40 (135)
T 3fxh_A 7 HHHHSSGRENLYFQGMNNKHATSAVHEIIREICR 40 (135)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 4334577411455325652047899999999999
No 15
>2js3_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural genomics, PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris CGA009}
Probab=94.35 E-value=0.028 Score=33.94 Aligned_cols=41 Identities=46% Similarity=0.869 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEE
Q ss_conf 421124554310576402741246889999999736816887
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFS 47 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfs 47 (172)
.....|||||||||||-.+-...| +-..-+...++..-..|
T Consensus 6 hhhhhssgrenlyfqgM~~~a~Ed-vRkIA~AL~kTAIE~vS 46 (96)
T 2js3_A 6 HHHHHSSGRENLYFQGMTDTAAED-VRKIATALLKTAIEIVS 46 (96)
T ss_dssp SCCTTCCCCCCBTTBSTTTHHHHH-HHHHHHHHHHTSEEEEE
T ss_pred CCCCCCCCCCCEEECCCCCCCHHH-HHHHHHHHHHHHHHHHC
T ss_conf 433345664103442653007899-99999999998877510
No 16
>3eet_A Putative GNTR-family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 1.97A {Streptomyces avermitilis}
Probab=93.88 E-value=0.017 Score=35.23 Aligned_cols=43 Identities=49% Similarity=0.733 Sum_probs=27.4
Q ss_pred CCCCCCCCCCCEEEEEECCC-------CHHHHHHHHHHH-HHHCCEEEEEE
Q ss_conf 42112455431057640274-------124688999999-97368168874
Q T0576 6 HHHHHSSGRENLYFQGHVEP-------GVTDRIGQMILE-MFRTGMCLFSV 48 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~-------~vtdrig~mile-mfr~gmclfsv 48 (172)
.....||||||+|||+||.- .+.|.|-.+|.. -|..|.-|=|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~P~Y~qI~~~L~~~I~~G~l~pG~rLPSe 56 (272)
T 3eet_A 6 HHHHHSSGRENLYFQGHMTFGEQPAYLRVAGDLRKKIVDGSLPPHTRLPSQ 56 (272)
T ss_dssp ------------CC-------CCCHHHHHHHHHHHHHHHTSSCTTSBCCCH
T ss_pred CCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 433223544101110669999998899999999999983999993999379
No 17
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, protein structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3 PDB: 2dj5_A
Probab=93.72 E-value=0.0089 Score=37.02 Aligned_cols=21 Identities=81% Similarity=1.437 Sum_probs=17.8
Q ss_pred CCCCCCCCCCEEEEEECCCCH
Q ss_conf 211245543105764027412
Q T0576 7 HHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~v 27 (172)
....||||||+||||+|..++
T Consensus 7 ~~~~~~~~~~~~~~~~mk~gv 27 (156)
T 1tjn_A 7 HHHHSSGRENLYFQGHMRRGL 27 (156)
T ss_dssp ----------------CCEEE
T ss_pred CCCCCCCCCCCCCCCCCCEEE
T ss_conf 432246765530357886389
No 18
>3lvy_A Carboxymuconolactone decarboxylase family; alpha-structure, structural genomics, PSI-2, protein structure initiative; 2.10A {Streptococcus mutans}
Probab=93.26 E-value=0.012 Score=36.17 Aligned_cols=19 Identities=89% Similarity=1.559 Sum_probs=15.7
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....||||+|||||++|-
T Consensus 6 ~~~~~~~~~~~~~~~~~Ms 24 (207)
T 3lvy_A 6 HHHHHSSGRENLYFQGHMS 24 (207)
T ss_dssp -----------------CC
T ss_pred CCCCCCCCCCCCCCCCCCC
T ss_conf 3321344320221359988
No 19
>2g8y_A Malate/L-lactate dehydrogenases; NAD, E.coli, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; HET: NAD 1PE; 2.15A {Escherichia coli K12}
Probab=93.25 E-value=0.01 Score=36.60 Aligned_cols=22 Identities=86% Similarity=1.473 Sum_probs=18.5
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....|||||||||||+|+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~ 27 (385)
T 2g8y_A 6 HHHHHSSGRENLYFQGHMESGH 27 (385)
T ss_dssp -------------------CCE
T ss_pred CCCCCCCCCCCHHHCCCCCCCC
T ss_conf 4332113342211012346345
No 20
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=92.76 E-value=0.015 Score=35.51 Aligned_cols=15 Identities=100% Similarity=1.668 Sum_probs=12.8
Q ss_pred CCCCCCCCCCEEEEE
Q ss_conf 211245543105764
Q T0576 7 HHHHSSGRENLYFQG 21 (172)
Q Consensus 7 hhhhssgrenlyfqg 21 (172)
....|||||||||||
T Consensus 7 ~~~~~~~~~~~~~~~ 21 (87)
T 2jn4_A 7 HHHHSSGRENLYFQG 21 (87)
T ss_dssp ---------------
T ss_pred CCCCCCCCCCEEECC
T ss_conf 231357640016315
No 21
>2gfq_A UPF0204 protein PH0006; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Pyrococcus horikoshii OT3} SCOP: c.56.7.1
Probab=92.65 E-value=0.0071 Score=37.62 Aligned_cols=34 Identities=59% Similarity=0.930 Sum_probs=24.6
Q ss_pred CCCCCCCCCCEEEEEECCCCHHH-------HHHHHHHHHHH
Q ss_conf 21124554310576402741246-------88999999973
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTD-------RIGQMILEMFR 40 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtd-------rig~milemfr 40 (172)
....|+||+|+||||||.--|.- .|..-+||+|.
T Consensus 7 ~~~~~~~~~~~~~~~~M~Liv~S~~D~AS~ni~~~Lle~~~ 47 (298)
T 2gfq_A 7 HHHHSSGRENLYFQGHMKVIMTTKVDKASMNIMNKLIENFG 47 (298)
T ss_dssp ---CCHHHHHHHTCSCCEEEEEETTCHHHHHHHHHHHHHSC
T ss_pred CCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 44346888541023615999990888410629999998669
No 22
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=92.53 E-value=0.018 Score=35.15 Aligned_cols=19 Identities=89% Similarity=1.546 Sum_probs=15.7
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....||||+|||||||+-
T Consensus 6 ~~~~~~~~~~~~~~~~~~p 24 (156)
T 2qpv_A 6 HHHHHSSGRENLYFQGHMP 24 (156)
T ss_dssp -----------------CC
T ss_pred CCCCCCCCCCCCEEECCCC
T ss_conf 4432455544326535777
No 23
>1ywu_A Hypothetical protein PA4608; PAT7, beta barrel, PILZ domain, structural genomics, PSI, protein structure initiative; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.45.2.1
Probab=92.52 E-value=0.014 Score=35.70 Aligned_cols=92 Identities=28% Similarity=0.433 Sum_probs=43.5
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCC---CCEEEEEECCEEEEEEC-CEEEE
Q ss_conf 211245543105764027412468899999997368168874188750212178---41067740534676501-21677
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGVAELYGG---EARKVEITGTSLTIERE-DWHLH 82 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~vaelygg---earkv~i~gtsltiere-~whlh 82 (172)
....|||||||||||+|..-.-+|=- ..-+.++.|..+ -++| +++-.|||-.-+-|+.. +|.+.
T Consensus 7 ~~~~~~~~~~~~~~~~M~~~~dERR~----------f~Rv~~~~~a~L--~~~~~~~~~~v~DISl~G~~I~t~~~~~l~ 74 (149)
T 1ywu_A 7 HHHHSSGRENLYFQGHMSDQHDERRR----------FHRIAFDADSEI--LQGERRWEVLLHDVSLHGILVGQPQDWNGD 74 (149)
T ss_dssp ----------------CCSCCCSSCC----------CCSSCCSCEEEE--EETTEEEEEEEEEECSSEEEEECSSCCCCC
T ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCC----------CEEEEECCEEEE--EECCEEEEEEEEECCCCCEEEECCCCCCCC
T ss_conf 33345522455301566889542578----------766874033999--989999999999814786799757876788
Q ss_pred EEEEEEEEEEEECCCCCCCCEEE--EEEEECCCC
Q ss_conf 75322237767427575786489--999703666
Q T0576 83 CKLETVETVVFDLSPKDNGGIRM--AVVFRDKHQ 114 (172)
Q Consensus 83 c~letvetvvfdlspk~nggirm--avvf~dkhq 114 (172)
..+.-++.|.|.+ +.-|++ -||..++++
T Consensus 75 --~g~~v~l~i~l~~--~~~i~l~a~Vv~~~~~~ 104 (149)
T 1ywu_A 75 --PQRPFEARLYLGL--DVLIRMEISLAWARDGL 104 (149)
T ss_dssp --TTSEEEEEEESSS--SCEEEEEEEEEEEETTE
T ss_pred --CCCEEEEEEECCC--CCEEEEEEEEEEECCCE
T ss_conf --9956999998699--85699999999964998
No 24
>3he1_A Major exported HCP3 protein; structural genomics, APC22128, HCPC, secretion, virulence, PSI-2, protein structure initiative; 2.10A {Pseudomonas aeruginosa}
Probab=92.35 E-value=0.019 Score=34.99 Aligned_cols=19 Identities=84% Similarity=1.452 Sum_probs=15.8
Q ss_pred CCCCCCCCCCEEEEEECCC
Q ss_conf 2112455431057640274
Q T0576 7 HHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~ 25 (172)
....|||||||||||+|..
T Consensus 7 ~~~~~~~~~~~~~~~~Ma~ 25 (195)
T 3he1_A 7 HHHHSSGRENLYFQGHMAT 25 (195)
T ss_dssp -----------------CC
T ss_pred CCCCCCCCCCCCCCCCCCC
T ss_conf 4334443223521346880
No 25
>2asy_A Protein YDHR precursor; dimeric APHA+beta barrel, homodimer, structural genomics, ontario centre for structural proteomics, OCSP; NMR {Escherichia coli} SCOP: d.58.4.12
Probab=92.35 E-value=0.019 Score=34.92 Aligned_cols=19 Identities=84% Similarity=1.452 Sum_probs=16.0
Q ss_pred CCCCCCCCCCEEEEEECCC
Q ss_conf 2112455431057640274
Q T0576 7 HHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~ 25 (172)
....|||||||||||+|..
T Consensus 7 ~~~~~~~~~~~~~~~~m~~ 25 (123)
T 2asy_A 7 HHHHSSGRENLYFQGHMAT 25 (123)
T ss_dssp ----------------CCE
T ss_pred CCCCCCCCCCEEEECCCCE
T ss_conf 3324578631798068837
No 26
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=92.10 E-value=0.023 Score=34.39 Aligned_cols=21 Identities=76% Similarity=1.300 Sum_probs=16.5
Q ss_pred CCCCCCCCCCEEEEEECCCCH
Q ss_conf 211245543105764027412
Q T0576 7 HHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~v 27 (172)
....|||||||||||++-+..
T Consensus 7 ~~~~~~~~~~~~~~~~~ms~l 27 (138)
T 2akl_A 7 HHHHSSGRENLYFQGHMVSTL 27 (138)
T ss_dssp ----------------CCCCS
T ss_pred CCCCCCCCCEEEEECCCCCCC
T ss_conf 332467730368807856779
No 27
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein structure initiative; 1.85A {Shewanella oneidensis mr-1} SCOP: b.40.14.1
Probab=92.07 E-value=0.069 Score=31.43 Aligned_cols=40 Identities=55% Similarity=0.926 Sum_probs=26.5
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCC-EEEEEECC
Q ss_conf 21124554310576402741246889999999736816887418875021217841-06774053
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGVAELYGGEA-RKVEITGT 70 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~vaelyggea-rkv~i~gt 70 (172)
....||||+|+||| +||| --|+-|-|+.+..+ -.||+.|.
T Consensus 7 ~~~~~~~~~~~~~~---------------------~MCL---aIP~kVveI~~~~~~A~Vd~~Gv 47 (103)
T 3d3r_A 7 HHHHSSGRENLYFQ---------------------GMCL---SIPSQVVAVDNERQSVTVDTLGV 47 (103)
T ss_dssp --------CTTEEE---------------------TTEE---CCCEEEEEEETTTTEEEEEETTE
T ss_pred CCCCCCCCCCCCCC---------------------CCCE---ECCEEEEEECCCCCEEEEECCCE
T ss_conf 33245773367655---------------------3315---01549999919988899967995
No 28
>3if4_A Integron cassette protein HFX_CASS5; integron cassette protein mobIle metagenome structural genomics PSI-2 protein structure initiative midwest center for structural genomics; HET: MSE; 2.18A {Unidentified}
Probab=91.93 E-value=0.021 Score=34.62 Aligned_cols=17 Identities=88% Similarity=1.413 Sum_probs=13.5
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....|||||||||||--
T Consensus 7 ~~~~~~~~~~~~~~~mk 23 (119)
T 3if4_A 7 HHHHSSGRENLYFQGMK 23 (119)
T ss_dssp -------------CCCE
T ss_pred CCCCCCCCCEEEEEHHH
T ss_conf 43345764101220010
No 29
>2hfv_A Hypothetical protein RPA1041; NESG, GFT-alpha+beta, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: d.58.5.5
Probab=91.51 E-value=0.029 Score=33.81 Aligned_cols=22 Identities=77% Similarity=1.306 Sum_probs=17.7
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....|+|||||||||.|..-+
T Consensus 6 ~~~~~~~~~~~~~~~~~MkEL~ 27 (97)
T 2hfv_A 6 HHHHHSSGRENLYFQGHLRELL 27 (97)
T ss_dssp CCCCCCCCCCCCCCCCSEEEEE
T ss_pred CCCCCCCCCHHEEEEEEEEEEE
T ss_conf 4433456611211121123233
No 30
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI-2, protein structure initiative; 1.80A {Agrobacterium tumefaciens str}
Probab=91.49 E-value=0.027 Score=34.00 Aligned_cols=16 Identities=94% Similarity=1.537 Sum_probs=13.6
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....|||||||||||+
T Consensus 7 ~~~~~~~~~~~~~~~~ 22 (219)
T 2qni_A 7 HHHHSSGRENLYFQGM 22 (219)
T ss_dssp --------------CC
T ss_pred CCCCCCCHHHHHHHCC
T ss_conf 4335664152775046
No 31
>2p06_A Hypothetical protein AF_0060; MCSG, PSI2, MAD, structural genomics, singleton, predicted coding region AF_0060; 2.10A {Archaeoglobus fulgidus dsm 4304} SCOP: a.204.1.3
Probab=91.34 E-value=0.028 Score=33.86 Aligned_cols=44 Identities=50% Similarity=0.735 Sum_probs=23.0
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCH
Q ss_conf 4211245543105764027412468899999997368168874188750
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGV 54 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~v 54 (172)
.....|||||||||||----... ...+-||...-|- .|..||..
T Consensus 6 hhhhhssgrenlyfqgmdyfrla---ekflremhakymk--rvsrpgnt 49 (114)
T 2p06_A 6 HHHHHSSGRENLYFQGMDYFRLA---EKFLREMHAKYMK--RVSRPGNT 49 (114)
T ss_dssp ----------------CCHHHHH---HHHHHHHHHHHHH--HHTSTTCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHH---HHHHHHHHHHHHH--HCCCCCCC
T ss_conf 33334576400011320699999---9999999999998--71699999
No 32
>3fm2_A Uncharacterized protein, distantly related to A heme binding/degrading HEMS (PF05171)...; YP_324846.1; HET: MSE; 1.80A {Anabaena variabilis atcc 29413}
Probab=91.12 E-value=0.83 Score=24.68 Aligned_cols=116 Identities=21% Similarity=0.337 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEEE----ECCEEEEEECCEEEEEEEEEEEEEEEECCCCCCCC-EE
Q ss_conf 88999999973681688741887502121784106774----05346765012167775322237767427575786-48
Q T0576 30 RIGQMILEMFRTGMCLFSVRSPGGVAELYGGEARKVEI----TGTSLTIEREDWHLHCKLETVETVVFDLSPKDNGG-IR 104 (172)
Q Consensus 30 rig~milemfr~gmclfsvrspg~vaelyggearkv~i----~gtsltiere~whlhc~letvetvvfdlspk~ngg-ir 104 (172)
.+-.++-++-.-|.-.+-||..+.|-|.- |+-.+... .|.-+++-.++.+||-+++-+..+-|--.|...|| ..
T Consensus 5 ~~~eLL~~l~~~G~v~~Iv~n~~~V~E~~-G~~~~~~~~~~~~G~~~n~~~~~~~lhl~~~~~~~~~~v~~~~~~Gg~~~ 83 (135)
T 3fm2_A 5 SLKDFLEACETLGTLRLIVTSSAAVLEAR-GKIEKLFYAELAKGKYANMHTEGFEFHLNMEKITQVKFETGEAKRGNFTT 83 (135)
T ss_dssp CHHHHHHHGGGGCEEEEEEECSSEEEEEE-EESCSCEEEEETTEEEEEEECSSEEEEEEGGGCCEEEEEEEECTTTCCEE
T ss_pred HHHHHHHHHHHHCCEEEEEECCCEEEEEE-CCCCCCEECCCCCCCEEEECCCCEEEEEEHHHCCEEEEEEECCCCCCEEE
T ss_conf 89999998685396599996798799997-57788276356775168741897679970577129999970566688048
Q ss_pred EEEEEECCCCCCEEHHHHCHHHCCCCCCC--HHHHHHHHHHHCCC
Q ss_conf 99997036667420110010006798787--67887765542014
Q T0576 105 MAVVFRDKHQAPVLRAAWLPRLMPETPSP--PEQFWAFTQRYIDL 147 (172)
Q Consensus 105 mavvf~dkhq~pvlraawlprlmp~tpsp--peqfwaftqryidl 147 (172)
..+-|-|.+-..|+. .+|.|--+....| -+.|-+.-++|-+.
T Consensus 84 ~SlqFfD~~G~~i~k-ifl~~d~~~~~~p~qv~~~~~L~~~~~~~ 127 (135)
T 3fm2_A 84 YAIRFLDEKQESALS-LFLQWGKPGEYEPGQVEAWHTLKEKYGEV 127 (135)
T ss_dssp EEEEEECTTSCEEEE-EEECCSSTTCCCTTHHHHHHHHHHHHCSE
T ss_pred EEEEEECCCCCEEEE-EEEECCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999999789989899-99553998774989999999999865353
No 33
>3fuy_A HFX_CASS1, putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 2.00A {Uncultured bacterium}
Probab=91.01 E-value=0.032 Score=33.53 Aligned_cols=18 Identities=89% Similarity=1.494 Sum_probs=14.2
Q ss_pred CCCCCCCCCCEEEEEECCC
Q ss_conf 2112455431057640274
Q T0576 7 HHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~ 25 (172)
....||||||||||| |++
T Consensus 7 hhhhssgrenlyfqg-mes 24 (179)
T 3fuy_A 7 HHHHSSGRENLYFQG-MES 24 (179)
T ss_dssp ------------------C
T ss_pred CCCCCCCCCCEEEEC-HHH
T ss_conf 433457752146621-534
No 34
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=90.97 E-value=0.068 Score=31.47 Aligned_cols=51 Identities=47% Similarity=0.779 Sum_probs=34.3
Q ss_pred CCCCCCCCCCCCEEEEEECCC--------CHHHHHHHHHHHHH-HCCEEE-EEECCCCCHH
Q ss_conf 442112455431057640274--------12468899999997-368168-8741887502
Q T0576 5 HHHHHHSSGRENLYFQGHVEP--------GVTDRIGQMILEMF-RTGMCL-FSVRSPGGVA 55 (172)
Q Consensus 5 hhhhhhssgrenlyfqgh~~~--------~vtdrig~milemf-r~gmcl-fsvrspg~va 55 (172)
......||||||+||||||.- |-+..||.-|-+-| +.|.-+ ..-|++...+
T Consensus 5 ~~~~~~~~~~~~~~~~~~m~l~g~~VLITGas~GIG~aiA~~la~~G~~V~~~~r~~~~~~ 65 (260)
T 3gem_A 5 HHHHHHSSGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV 65 (260)
T ss_dssp ----------------------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
T ss_conf 5455567998774433766889196999778559999999999988998999989879999
No 35
>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, protein structure initiative; HET: MSE; 2.59A {Helicobacter pylori 26695}
Probab=90.53 E-value=0.036 Score=33.24 Aligned_cols=44 Identities=50% Similarity=0.791 Sum_probs=30.8
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEE
Q ss_conf 211245543105764027412468899999997368168874188750212178410677
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGVAELYGGEARKVE 66 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~vaelyggearkv~ 66 (172)
....|+||||+|||+||+.--. .....|.|-...-||+.+-+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~g~l~~~~g~~~p~~~ 50 (207)
T 2evv_A 7 HHHHSSGRENLYFQGHMKTFEV----------------MIQTDSKGYLDAKFGGNAPKAF 50 (207)
T ss_dssp ----------------CEECCE----------------ECCCCTTSBCCGGGSTTSCGGG
T ss_pred CCCCCCCCCCCCCCCCCCEEEE----------------EEECCCCCCCCCHHHCCCCHHH
T ss_conf 4322333343332568760899----------------9972788624533203486445
No 36
>2i6h_A AGR_C_189P, hypothetical protein ATU0120; structural genomics, APC5905, PSI-2, protein structure initiative; 1.75A {Agrobacterium tumefaciens str} SCOP: a.118.8.5
Probab=90.42 E-value=0.071 Score=31.39 Aligned_cols=32 Identities=53% Similarity=0.947 Sum_probs=22.8
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 211245543105764027412468899999997
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMF 39 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemf 39 (172)
....|+|||||||||+|...-.... .-||...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~a-~~IL~FW 38 (207)
T 2i6h_A 7 HHHHSSGRENLYFQGHMKNDTAALA-ADIVDFW 38 (207)
T ss_dssp ----------------CCSTTCHHH-HHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHCCCCHHHH-HHHHHHH
T ss_conf 3323566420012666424114579-8998871
No 37
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, human, structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.39 E-value=0.08 Score=31.05 Aligned_cols=49 Identities=47% Similarity=0.736 Sum_probs=31.5
Q ss_pred CCCCCCCCCCCEEEEEECCC-------------CHHHHHHHHHHHHH-HCCEEEEE-ECCCCCH
Q ss_conf 42112455431057640274-------------12468899999997-36816887-4188750
Q T0576 6 HHHHHSSGRENLYFQGHVEP-------------GVTDRIGQMILEMF-RTGMCLFS-VRSPGGV 54 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~-------------~vtdrig~milemf-r~gmclfs-vrspg~v 54 (172)
.....||||+|||||+||.+ |-+.-||.-|-+.| +.|..+.- -|++...
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~~~L~GKvalITGas~GIG~aiA~~la~~Ga~Vvl~~r~~~~l 68 (272)
T 1yb1_A 5 HHHHHSSGRENLYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL 68 (272)
T ss_dssp --------------------CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf 4465677754433126799999999998899928766999999999998799899998999999
No 38
>3jrt_A Integron cassette protein VPC_CASS2; mobIle metagenome, structural genomics, PSI-2 protein structure initiative; 2.30A {Vibrio paracholerae}
Probab=90.21 E-value=0.041 Score=32.85 Aligned_cols=20 Identities=80% Similarity=1.263 Sum_probs=15.1
Q ss_pred CCCCCCCCCCCEEEEEECCC
Q ss_conf 42112455431057640274
Q T0576 6 HHHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~ 25 (172)
.....|||||||||||---+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~ 25 (192)
T 3jrt_A 6 HHHHHSSGRENLYFQGVKMS 25 (192)
T ss_dssp ---------------CCCCC
T ss_pred CCCCCCCCCCCEEEECCCCC
T ss_conf 44334566431145330021
No 39
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, structural genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2
Probab=90.06 E-value=0.089 Score=30.75 Aligned_cols=52 Identities=44% Similarity=0.697 Sum_probs=34.6
Q ss_pred CCCCCCCCCCCEEEEEECCC--------CHHHHHHHHHHHHHH-CCEEEEEE--CCCCCHHHH
Q ss_conf 42112455431057640274--------124688999999973-68168874--188750212
Q T0576 6 HHHHHSSGRENLYFQGHVEP--------GVTDRIGQMILEMFR-TGMCLFSV--RSPGGVAEL 57 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~--------~vtdrig~milemfr-~gmclfsv--rspg~vael 57 (172)
.....|||||||||+|+|+- |.+--||+-+++.+. .|.-...+ .+++....+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~KKIlVTGatGfIG~~lv~~L~~~g~~V~~id~~~~~~~~~~ 68 (343)
T 2b69_A 6 HHHHHSSGRENLYFQGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV 68 (343)
T ss_dssp ---------------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT
T ss_pred CCCCCCCCCCCCEEHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
T ss_conf 443224311200002101036989999789728999999999978698999968876777778
No 40
>3kh0_A Ralgds, ralgef, RAL guanine nucleotide dissociation stimulator; structural genomics consortium, SGC, RAS-association domain, alternative splicing; 2.10A {Homo sapiens} PDB: 2rgf_A 1lxd_A
Probab=88.93 E-value=0.054 Score=32.11 Aligned_cols=37 Identities=49% Similarity=0.855 Sum_probs=23.8
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHC
Q ss_conf 2112455431057640274124688999999973681688741887502121
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGVAELY 58 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~vaely 58 (172)
....|||||||||||.-.. +.+|+.-|.--+.-..+|
T Consensus 4 ~~~~~~~~~~~~~~~nqQ~---------------~d~~IIRVsld~d~gnlY 40 (140)
T 3kh0_A 4 HHHHSSGRENLYFQGNQQV---------------GDCCIIRVSLDVDNGNMY 40 (140)
T ss_dssp ---------CCCCCCSCSS---------------SCEEEEEEEEECSSSEEE
T ss_pred CCCCCCCCCEEEEECCCCC---------------CCEEEEEEEEECCCCCEE
T ss_conf 3445677402688436516---------------973899999866998488
No 41
>3c5h_A Glucocorticoid receptor DNA-binding factor 1; RAS, GTPase, glucorticoid receptor, structural genomics consortium, SGC, alternative splicing; HET: GNP; 1.80A {Homo sapiens}
Probab=88.58 E-value=0.057 Score=31.95 Aligned_cols=17 Identities=88% Similarity=1.445 Sum_probs=13.9
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....||||||||||+-.
T Consensus 4 ~~~~~~~~~~~~~~~t~ 20 (255)
T 3c5h_A 4 HHHHSSGRENLYFQGTY 20 (255)
T ss_dssp -------CTTSSCCSCE
T ss_pred CCCCCCCCCCCCCCCEE
T ss_conf 55667897554425557
No 42
>3c07_A Putative TETR-family transcriptional regulator; APC6322, structural genomics, PSI-2, protein structure initiative; 2.70A {Streptomyces coelicolor A3} SCOP: a.4.1.9 a.121.1.1 PDB: 2ofl_A*
Probab=87.93 E-value=0.076 Score=31.19 Aligned_cols=21 Identities=81% Similarity=1.387 Sum_probs=17.2
Q ss_pred CCCCCCCCCCCEEEEEECCCC
Q ss_conf 421124554310576402741
Q T0576 6 HHHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~ 26 (172)
.....++||+|+||||||-++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~ 26 (273)
T 3c07_A 6 HHHHHSSGRENLYFQGHMPAT 26 (273)
T ss_dssp ---------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCC
T ss_conf 445578621213368999999
No 43
>2b94_A Purine nucleoside phosphorylase; SGPP, structural genomics, PSI, protein structure initiative, PNP, UDP, ontario/toronto SGC; 1.85A {Plasmodium knowlesi} PDB: 3emv_A 1sq6_A 2bsx_A* 3enz_A*
Probab=87.28 E-value=0.044 Score=32.64 Aligned_cols=26 Identities=73% Similarity=1.242 Sum_probs=19.7
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHH
Q ss_conf 42112455431057640274124688
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRI 31 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdri 31 (172)
.....||||||||+||||+...+--|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~Hi 31 (267)
T 2b94_A 6 HHHHHSSGRENLYFQGHMEEEMQRHI 31 (267)
T ss_dssp ----------CCCCTTCSSCCCCTTT
T ss_pred CCCCCCCCCHHCCCCCCCCCCCCCCC
T ss_conf 44445687121102444544677676
No 44
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens str}
Probab=87.17 E-value=0.091 Score=30.68 Aligned_cols=19 Identities=84% Similarity=1.429 Sum_probs=15.9
Q ss_pred CCCCCCCCCCEEEEEECCC
Q ss_conf 2112455431057640274
Q T0576 7 HHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~ 25 (172)
....|||||||||++||..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~ 25 (144)
T 2kjz_A 7 HHHHSSGRENLYFQGHMTH 25 (144)
T ss_dssp ----------------CCC
T ss_pred CCCCCCCCCHHHHHCCCCC
T ss_conf 4424566510234334799
No 45
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=86.95 E-value=0.1 Score=30.31 Aligned_cols=49 Identities=47% Similarity=0.870 Sum_probs=30.2
Q ss_pred CCCCCCCCCCCEEEEEECCC--------------CHHHHHHHHHHHHH-HCCEEE-EEECCCCCH
Q ss_conf 42112455431057640274--------------12468899999997-368168-874188750
Q T0576 6 HHHHHSSGRENLYFQGHVEP--------------GVTDRIGQMILEMF-RTGMCL-FSVRSPGGV 54 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~--------------~vtdrig~milemf-r~gmcl-fsvrspg~v 54 (172)
.....||||||||||+||.. |-+.-||.-|-+.| +.|.-+ ..-|++...
T Consensus 5 ~~~~~~~~~~~~~f~~~~~~~~M~~lkgKvalITGas~GIG~aia~~la~~Ga~Vv~~~r~~~~l 69 (279)
T 1xg5_A 5 HHHHHSSGRENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI 69 (279)
T ss_dssp ------------------CCTTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf 55645788774040176799998774997899928887899999999998799999997988999
No 46
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein structure initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=86.94 E-value=0.098 Score=30.48 Aligned_cols=18 Identities=89% Similarity=1.521 Sum_probs=15.4
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....||||||+||+++|+
T Consensus 7 ~~~~~~~~~~~~~~~~m~ 24 (249)
T 2i3d_A 7 HHHHSSGRENLYFQGHMP 24 (249)
T ss_dssp -----------------C
T ss_pred CCCCCCCCCEEECCCCCC
T ss_conf 432468842000157777
No 47
>3bni_A Putative TETR-family transcriptional regulator; structural genomics, APC7281, TETR transcriptional regulator, PSI-2; HET: PG4; 2.30A {Streptomyces coelicolor A3}
Probab=86.61 E-value=0.1 Score=30.44 Aligned_cols=22 Identities=77% Similarity=1.286 Sum_probs=17.7
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....||||||+||||||.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~ 27 (229)
T 3bni_A 6 HHHHHSSGRENLYFQGHMRTVS 27 (229)
T ss_dssp ----------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 3344445654456678999999
No 48
>2fsr_A Acetyltranferase; alpha-beta-sandwich, structural genomics, PSI, protein structure initiative; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=86.54 E-value=0.11 Score=30.25 Aligned_cols=20 Identities=80% Similarity=1.381 Sum_probs=16.4
Q ss_pred CCCCCCCCCCEEEEEECCCC
Q ss_conf 21124554310576402741
Q T0576 7 HHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~ 26 (172)
....|||||||||||||.-.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~ 26 (195)
T 2fsr_A 7 HHHHSSGRENLYFQGHMNHS 26 (195)
T ss_dssp ------CCCCCCC------C
T ss_pred CCCCCCCCCCEEEECCCCCC
T ss_conf 43234542133440552758
No 49
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, phosphopantetheine transferase, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=86.33 E-value=0.1 Score=30.43 Aligned_cols=20 Identities=90% Similarity=1.511 Sum_probs=16.7
Q ss_pred CCCCCCCCCCCEEEEEECCC
Q ss_conf 42112455431057640274
Q T0576 6 HHHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~ 25 (172)
.....||||||+||++||+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~ 26 (323)
T 2c43_A 7 HHHHHSSGRENLYFQGHMEG 26 (323)
T ss_dssp -----------CCSCCCCCC
T ss_pred CCCCCCCCCCCCHHHCCCCC
T ss_conf 43334555432122222233
No 50
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, PSI-2, protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=86.13 E-value=0.079 Score=31.09 Aligned_cols=46 Identities=43% Similarity=0.666 Sum_probs=28.7
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHH
Q ss_conf 421124554310576402741246889999999736816887418875021
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGVAE 56 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~vae 56 (172)
.....+||||||++|||||.+-.- -..+|...++.. ..+.|..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~d~~~~y--~~~~~~~~~~~~---~~~~p~~mt~ 51 (195)
T 2q05_A 6 HHHHHSSGRENLYFQGHMDKKSLY--KYLLLRSTGDMH---RAKSPTIMTR 51 (195)
T ss_dssp -CCCCCCC----CCTTTSCHHHHH--HHHHHHHTTCCC---CCCBCCSCEE
T ss_pred CCCCCCCCHHHHHHHHHCCHHHHH--HHHHHHHCCCCC---CCCCCCCCEE
T ss_conf 443356763330144304177787--777776226776---6679998516
No 51
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens}
Probab=85.84 E-value=0.094 Score=30.61 Aligned_cols=17 Identities=88% Similarity=1.497 Sum_probs=14.0
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....|||||||||||.-
T Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (334)
T 2qq8_A 4 HHHHSSGRENLYFQGNA 20 (334)
T ss_dssp -----------CCSSCH
T ss_pred CCCCCCCCCHHHHHHHH
T ss_conf 43444676126664769
No 52
>2id3_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 1.70A {Streptomyces coelicolor} SCOP: a.4.1.9 a.121.1.1
Probab=85.67 E-value=0.12 Score=29.96 Aligned_cols=22 Identities=77% Similarity=1.303 Sum_probs=17.3
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....||||+|+||||||..-.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~ 27 (225)
T 2id3_A 6 HHHHHSSGRENLYFQGHMPDPA 27 (225)
T ss_dssp ----------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 4556788655555578999999
No 53
>2k5h_A Conserved protein; structure, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Methanothermobacterthermautotrophicus str}
Probab=85.45 E-value=0.13 Score=29.64 Aligned_cols=61 Identities=39% Similarity=0.689 Sum_probs=35.8
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEE-EE-C--CEEEEEECCEEE
Q ss_conf 4211245543105764027412468899999997368168874188750212178410677-40-5--346765012167
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGVAELYGGEARKVE-IT-G--TSLTIEREDWHL 81 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~vaelyggearkv~-i~-g--tsltiere~whl 81 (172)
.....|||||+|||.+++-.++++.- .+ .-...+|.|-++.-++ |+ + -...|.-+.|..
T Consensus 6 ~~~~~~~~~~~~~f~~~la~ri~~~~----------------~~-k~~~d~lIG~~g~V~~~I~~~~~G~V~i~Ge~W~A 68 (101)
T 2k5h_A 6 HHHHHSSGRENLYFQGHMAARITGEP----------------SK-KAVSDRLIGRKGVVMEAISPQNSGLVKVDGETWRA 68 (101)
T ss_dssp CCCSCSCCCCCCCCCCCSSCCCSSSC----------------CS-SCCCGGGTTSEEEEEECBCSSSCEEEEETTEEEEE
T ss_pred CCCCCCCCCEEEEEEEHHHHHHCCCC----------------CC-CCCHHHCCCCEEEEEEEECCCCEEEEEECCEEEEE
T ss_conf 32324688234898622104410898----------------87-64768808998999697189987999999999999
Q ss_pred EE
Q ss_conf 77
Q T0576 82 HC 83 (172)
Q Consensus 82 hc 83 (172)
-|
T Consensus 69 ~s 70 (101)
T 2k5h_A 69 TS 70 (101)
T ss_dssp EC
T ss_pred EE
T ss_conf 84
No 54
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genomics, structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=84.40 E-value=0.18 Score=28.84 Aligned_cols=33 Identities=55% Similarity=0.887 Sum_probs=21.5
Q ss_pred CCCCCCCCCCCEEEEEECCCC--------------HHHHHHHHHHHH
Q ss_conf 421124554310576402741--------------246889999999
Q T0576 6 HHHHHSSGRENLYFQGHVEPG--------------VTDRIGQMILEM 38 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~--------------vtdrig~milem 38 (172)
.....||||||||||+-.+.. -+.|...|+--|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~Y~AklaeqaeRyddM~~~m 52 (268)
T 3efz_A 6 HHHHHSSGRENLYFQGITEKNMKLSEGAYRAKLADMVGNYKDVIKVL 52 (268)
T ss_dssp ----------------------------------------CHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_conf 34445532013588641054322789999999999985899999999
No 55
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structural genomics, PSI-2, protein structure initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=84.18 E-value=0.15 Score=29.28 Aligned_cols=19 Identities=89% Similarity=1.522 Sum_probs=15.4
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....|||||||||||+.-
T Consensus 6 ~~~~~~~~~~~~~~~~~~~ 24 (343)
T 2rbc_A 6 HHHHHSSGRENLYFQGHMV 24 (343)
T ss_dssp -------------------
T ss_pred CCCCCCCCCCCEEECCCCC
T ss_conf 4444556544533202020
No 56
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=83.58 E-value=0.19 Score=28.68 Aligned_cols=22 Identities=77% Similarity=1.288 Sum_probs=17.7
Q ss_pred CCCCCCCCCCEEEEEECCCCHH
Q ss_conf 2112455431057640274124
Q T0576 7 HHHHSSGRENLYFQGHVEPGVT 28 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vt 28 (172)
....||||+|+|||.||..+..
T Consensus 7 ~~~~~~~~~~~~f~~~l~~~~~ 28 (107)
T 2fgx_A 7 HHHHSSGRENLYFQGHMNNQVE 28 (107)
T ss_dssp ----------------CCCCCC
T ss_pred CCCCCCCCHHHHHHHHHHCCCC
T ss_conf 4435554006778999846789
No 57
>1tvi_A Hypothetical UPF0054 protein TM1509; alpha + beta, mixed 4-stranded beta sheet, four helix bundle, structural genomics; NMR {Thermotoga maritima} SCOP: d.92.1.15
Probab=83.21 E-value=0.18 Score=28.82 Aligned_cols=21 Identities=76% Similarity=1.213 Sum_probs=16.6
Q ss_pred CCCCCCCCCCEEEEEECCCCH
Q ss_conf 211245543105764027412
Q T0576 7 HHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~v 27 (172)
....||+|+|||||+|+-.-.
T Consensus 7 ~~~~~~~~~nl~f~~~~i~i~ 27 (172)
T 1tvi_A 7 HHHHSSGRENLYFQGHMIRIL 27 (172)
T ss_dssp ----------------CCEEE
T ss_pred CCCCHHHHHEEEHHHCCHHHH
T ss_conf 322021565041101002220
No 58
>3g80_A Protein B2; RNA-binding, viral protein, suppressor of RNAI, RNA interference; 2.50A {Nodamura virus}
Probab=82.99 E-value=0.18 Score=28.80 Aligned_cols=14 Identities=57% Similarity=0.968 Sum_probs=11.4
Q ss_pred CCCCCEEEEEECCC
Q ss_conf 55431057640274
Q T0576 12 SGRENLYFQGHVEP 25 (172)
Q Consensus 12 sgrenlyfqgh~~~ 25 (172)
..-|||||||||..
T Consensus 9 hamenlyfqghMs~ 22 (97)
T 3g80_A 9 HAMENLYFQGHMTN 22 (97)
T ss_dssp --------------
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99988888623124
No 59
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structural proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus dsm 4304}
Probab=82.96 E-value=0.19 Score=28.72 Aligned_cols=20 Identities=85% Similarity=1.456 Sum_probs=16.1
Q ss_pred CCCCCCCCCCCEEEEEECCC
Q ss_conf 42112455431057640274
Q T0576 6 HHHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~ 25 (172)
.....|+||||+|||||+-.
T Consensus 6 ~~~~~~~~~~~~~~~g~~~~ 25 (153)
T 2nnz_A 6 HHHHHSSGRENLYFQGHMGE 25 (153)
T ss_dssp -----------------CCC
T ss_pred CCCCCCCCCCCCCCCCCCCC
T ss_conf 42223577615312165563
No 60
>2qkr_A CDC2-like CDK2/CDC28 like protein kinase; CP-specific cyclin-dependent kinase, malaria, structural genomics; HET: IXM; 2.60A {Cryptosporidium parvum iowa II}
Probab=82.88 E-value=0.18 Score=28.81 Aligned_cols=19 Identities=84% Similarity=1.365 Sum_probs=15.8
Q ss_pred CCCCCCCCCCEEEEEECCC
Q ss_conf 2112455431057640274
Q T0576 7 HHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~ 25 (172)
....||||||+||||-+|-
T Consensus 4 ~~~~~~~~en~y~~~~~dr 22 (313)
T 2qkr_A 4 HHHHSSGRENLYFQGLMEK 22 (313)
T ss_dssp -----------CCBCSSCB
T ss_pred CCCCCCCCCCCCCCCCCCC
T ss_conf 6778899866777771016
No 61
>2q2f_A Selenoprotein S; anti-parallel coiled-coil, endoplasmic reticulum, membrane, selenium, selenocysteine, transmembrane, structural genomics; HET: MSE; 1.50A {Homo sapiens}
Probab=82.51 E-value=0.19 Score=28.64 Aligned_cols=15 Identities=93% Similarity=1.531 Sum_probs=12.7
Q ss_pred CCCCCCCCCEEEEEE
Q ss_conf 112455431057640
Q T0576 8 HHHSSGRENLYFQGH 22 (172)
Q Consensus 8 hhhssgrenlyfqgh 22 (172)
...||||||||||+-
T Consensus 5 ~~~~~~~~~L~fQh~ 19 (89)
T 2q2f_A 5 HHHSSGRENLYFQGS 19 (89)
T ss_dssp -------------CC
T ss_pred CCCCCCCHHHHHHHH
T ss_conf 345565301577510
No 62
>2qis_A Farnesyl pyrophosphate synthetase; trans-prenyltransferase, structural genomics, structural genomics consortium, SGC; HET: RIS; 1.80A {Homo sapiens} PDB: 1yv5_A* 1yq7_A* 2opm_A* 2opn_A* 3cp6_A* 2rah_A* 2vf6_A* 1zw5_A* 3b7l_A* 2f94_F* 2f89_F* 2f7m_F* 2f8z_F* 2f8c_F* 2f92_F* 2f9k_F*
Probab=82.26 E-value=0.34 Score=27.13 Aligned_cols=20 Identities=85% Similarity=1.466 Sum_probs=16.4
Q ss_pred CCCCCCCCCCCEEEEEECCC
Q ss_conf 42112455431057640274
Q T0576 6 HHHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~ 25 (172)
.....||||||||||++++.
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~ 24 (374)
T 2qis_A 5 HHHHHSSGRENLYFQGHMNG 24 (374)
T ss_dssp --------------------
T ss_pred CCCCCCCCCCCEEECCCCCC
T ss_conf 33423467511100022588
No 63
>2bdd_A ACP-synthase; structural genomics, structural genomics consortium, SGC, transferase; 2.28A {Plasmodium yoelii yoelii}
Probab=81.66 E-value=0.33 Score=27.21 Aligned_cols=29 Identities=66% Similarity=1.117 Sum_probs=23.3
Q ss_pred CCCCCCCCCCEEEEEECCCCH------HHHHHHHH
Q ss_conf 211245543105764027412------46889999
Q T0576 7 HHHHSSGRENLYFQGHVEPGV------TDRIGQMI 35 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~v------tdrig~mi 35 (172)
....+||||||||+|+|=-|+ .+||..++
T Consensus 7 ~~~~~~~~~~~~~~~~MI~GIGiDIV~I~Ri~~~l 41 (182)
T 2bdd_A 7 HHHHSSGRENLYFQGHHIIGIGTDILCVNRIYKIL 41 (182)
T ss_dssp -------------CCEEEEEEEEEEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHH
T ss_conf 32001014442126992899957631779999999
No 64
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.30A {Shewanella oneidensis mr-1}
Probab=81.49 E-value=0.22 Score=28.24 Aligned_cols=38 Identities=55% Similarity=0.870 Sum_probs=26.1
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 4211245543105764027412468899999997368168874
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSV 48 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsv 48 (172)
.....|+||||+|||++|.+-+..- ...+.+..-+|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~ 43 (407)
T 3ju1_A 6 HHHHHSSGRENLYFQGHMTNLVDKA-----AHSFATQNVVFQT 43 (407)
T ss_dssp ----------------------------------CCSSEEEEE
T ss_pred CCCCCCCCCCCEEEECCCCCCCHHH-----HCCCCCCCEEEEE
T ss_conf 4433355655056433557761432-----1025668647899
No 65
>3iez_A RAS GTPase-activating-like protein iqgap2; structural genomics consortium, SGC, alternative splicing, calmodulin-binding, phosphoprotein; 1.50A {Homo sapiens}
Probab=80.65 E-value=0.25 Score=27.95 Aligned_cols=23 Identities=70% Similarity=1.019 Sum_probs=16.8
Q ss_pred CCCCCCCCCCEEEEEECCCCHHH
Q ss_conf 21124554310576402741246
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTD 29 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtd 29 (172)
....||||||||||+----|-|-
T Consensus 4 ~~~~~~~~~~~~~~~~ks~KYSA 26 (114)
T 3iez_A 4 HHHHSSGRENLYFQGAKPVKYTA 26 (114)
T ss_dssp ----------------CCEEEEH
T ss_pred CCCCCCCHHEEEECCCCCEEECH
T ss_conf 44356760103401398577738
No 66
>3c6v_A Probable tautomerase/dehalogenase AU4130; aspergillus fumigatus trimeric thermophilic probable tautomerase/dehalogenase; HET: MSE; 1.90A {Aspergillus fumigatus AF293}
Probab=80.45 E-value=0.22 Score=28.26 Aligned_cols=16 Identities=100% Similarity=1.688 Sum_probs=12.8
Q ss_pred CCCCCCCCCCCEEEEE
Q ss_conf 4211245543105764
Q T0576 6 HHHHHSSGRENLYFQG 21 (172)
Q Consensus 6 hhhhhssgrenlyfqg 21 (172)
.....||||+|||||+
T Consensus 6 ~~~~~~~~~~~~~~~~ 21 (161)
T 3c6v_A 6 HHHHHSSGRENLYFQG 21 (161)
T ss_dssp -------------CCS
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 4433466533421059
No 67
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=80.44 E-value=2.1 Score=22.18 Aligned_cols=35 Identities=49% Similarity=0.812 Sum_probs=21.9
Q ss_pred CCCCCCCCCCCEEEEEECCC------CHHHHHHHHHHHHHH
Q ss_conf 42112455431057640274------124688999999973
Q T0576 6 HHHHHSSGRENLYFQGHVEP------GVTDRIGQMILEMFR 40 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~------~vtdrig~milemfr 40 (172)
.....|||||||||||-.+. +...|+-.-+-++-+
T Consensus 6 ~~~~~ss~~~~~~~~~~a~~~~~~~p~~~~rl~kEl~~i~~ 46 (193)
T 2f4z_A 6 HHHHHSSGRENLYFQGMATAQPRGTPREQARLLKELADIQQ 46 (193)
T ss_dssp --------------------------CHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 45445654211022443434777882589999999999985
No 68
>1p8c_A Conserved hypothetical protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Thermotoga maritima} SCOP: a.152.1.2
Probab=80.11 E-value=0.27 Score=27.77 Aligned_cols=21 Identities=86% Similarity=1.398 Sum_probs=17.4
Q ss_pred CCCCCCCCCCCEEEEEECCCC
Q ss_conf 421124554310576402741
Q T0576 6 HHHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~ 26 (172)
.....|+|||||||+|||+-+
T Consensus 6 ~~~~~~~~~e~l~~~g~~~~~ 26 (145)
T 1p8c_A 6 HHHHHSSGRENLYFQGHMEYK 26 (145)
T ss_dssp ---------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHH
T ss_conf 221000219999887433699
No 69
>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A
Probab=79.82 E-value=0.24 Score=28.01 Aligned_cols=65 Identities=40% Similarity=0.598 Sum_probs=36.2
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHH-CCCCCE-E--E-EEECCEEEEEECCEEE
Q ss_conf 211245543105764027412468899999997368168874188750212-178410-6--7-7405346765012167
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGVAEL-YGGEAR-K--V-EITGTSLTIEREDWHL 81 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~vael-yggear-k--v-~i~gtsltiere~whl 81 (172)
....|||||||||+|--+--| .+..|-..|-+ |=|..- + . --+--|+|...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~v-------------------T~~Ap~NIAlIKYWGKrD~~l~lP~N~SiS~TL~~----- 59 (414)
T 3f0n_A 4 HHHHSSGRENLYFQGPQDLMV-------------------TCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQ----- 59 (414)
T ss_dssp -------CTTSCC----CEEE-------------------EEEECCEEEEECCCCEEETTTTEESSCEEEEEBCT-----
T ss_pred CCCCCCCCCCCEECCCCCEEE-------------------EEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECC-----
T ss_conf 444556655520216666389-------------------99823675254125756887789999805798058-----
Q ss_pred EEEEEEEEEEEEECC
Q ss_conf 775322237767427
Q T0576 82 HCKLETVETVVFDLS 96 (172)
Q Consensus 82 hc~letvetvvfdls 96 (172)
+.+.|.-||.++-+
T Consensus 60 -~~~~T~Ttv~~s~~ 73 (414)
T 3f0n_A 60 -DQLKTTTTVAISKD 73 (414)
T ss_dssp -TTSCEEEEEEECTT
T ss_pred -CCCEEEEEEEECCC
T ss_conf -88678999997888
No 70
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=79.14 E-value=0.3 Score=27.46 Aligned_cols=23 Identities=70% Similarity=1.211 Sum_probs=18.2
Q ss_pred CCCCCCCCCCEEEEEECCCCHHH
Q ss_conf 21124554310576402741246
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTD 29 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtd 29 (172)
....+|||||+||++|+.+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (151)
T 3f6v_A 7 HHHHSSGRENLYFQGHMNSPTSR 29 (151)
T ss_dssp -----------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 32111232145566567998889
No 71
>3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1}
Probab=78.86 E-value=0.4 Score=26.68 Aligned_cols=22 Identities=82% Similarity=1.431 Sum_probs=17.2
Q ss_pred CCCCCCCCCCCCEEEEEECCCC
Q ss_conf 4421124554310576402741
Q T0576 5 HHHHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 5 hhhhhhssgrenlyfqgh~~~~ 26 (172)
......|+||||+||||+|.-.
T Consensus 5 ~~~~~~~~g~~n~~~~~~~~i~ 26 (182)
T 3kkw_A 5 HHHHHHSSGRENLYFQGHMQLS 26 (182)
T ss_dssp TTSSC------------CCCCE
T ss_pred CCCCCCCCCCCEEEECCCCEEE
T ss_conf 5555557873300256997079
No 72
>2kdn_A Putative uncharacterized protein PFE0790C; solution structure, ssgcid, seattle structural genomics center for infectious disease; NMR {Plasmodium falciparum}
Probab=78.59 E-value=1.6 Score=22.92 Aligned_cols=43 Identities=42% Similarity=0.661 Sum_probs=30.5
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 211245543105764027412468899999997368168874188
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSP 51 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrsp 51 (172)
....||||+|+||.+.|. +.+.|-..|.+-|..--.-..-.|.
T Consensus 7 ~~~~~~g~~~l~~~~~M~--i~~~I~~kL~~~l~p~~leV~D~S~ 49 (108)
T 2kdn_A 7 HHHHSSGRENLYFQGHMC--IQKVIEDKLSSALKPTFLELVDKSC 49 (108)
T ss_dssp CCCCCSSSSTTCCTTSCS--HHHHHHHHHHHHHCCSEEEEEECCC
T ss_pred CCCCCCHHHHHHHHCCCC--HHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 322354176644045653--9999999998558997689997899
No 73
>1k7k_A Hypothetical protein YGGV; MAD, His-TAG, large groove, disordered Se-Met, structural genomics, putative ribosomal protein, PSI; HET: MSE; 1.50A {Escherichia coli} SCOP: c.51.4.1 PDB: 2q16_A* 2pyu_A*
Probab=78.56 E-value=0.37 Score=26.90 Aligned_cols=19 Identities=89% Similarity=1.585 Sum_probs=15.8
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....||||+|+||+|.|.
T Consensus 6 ~~~~~~~~~~~~~~~~~M~ 24 (221)
T 1k7k_A 6 HHHHHSSGRENLYFQGHMQ 24 (221)
T ss_dssp -----CCCTTSSCC--CCE
T ss_pred CCCCCCCCCCCCHHHCCCC
T ss_conf 4321358730107555898
No 74
>2qko_A Possible transcriptional regulator, TETR family protein; structural genomics, PSI-2, protein structure initiative; 2.35A {Rhodococcus SP}
Probab=78.51 E-value=0.77 Score=24.88 Aligned_cols=55 Identities=38% Similarity=0.685 Sum_probs=33.2
Q ss_pred CCCCCCCCCCCEEEEEECCCCH--HHHHHHHHHHHHH-CCEEEEEEC--------CCCCHHHHCCC
Q ss_conf 4211245543105764027412--4688999999973-681688741--------88750212178
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV--TDRIGQMILEMFR-TGMCLFSVR--------SPGGVAELYGG 60 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v--tdrig~milemfr-~gmclfsvr--------spg~vaelygg 60 (172)
.....|+||+|+|+||+|-..- -++|-.--+++|. .|.--.|++ |+|++-.-|++
T Consensus 6 ~~~~~~~~~~~~~~~g~~ar~~erR~~Il~AA~~l~~~~G~~~~Ti~~IA~~aGvs~~~lY~~F~s 71 (215)
T 2qko_A 6 HHHHHSSGRENLYFQGHMAQNPERRAALVNAAIEVLAREGARGLTFRAVDVEANVPKGTASNYFPS 71 (215)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHTCTTTCCHHHHHHHSSSTTTCHHHHCSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHCCC
T ss_conf 555578778776658999989899999999999999984914077999999868996327865898
No 75
>3kye_A Roadblock/LC7 domain, ROBL_LC7; alpga-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces avermitilis}
Probab=78.10 E-value=0.61 Score=25.54 Aligned_cols=22 Identities=77% Similarity=1.295 Sum_probs=17.8
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....||+|||+|+|||.-+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~ 27 (150)
T 3kye_A 6 HHHHHSSGRENLYFQGHHVSDL 27 (150)
T ss_dssp ------------------CHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCH
T ss_conf 4432347898755589887769
No 76
>3eap_A RHO GTPase-activating protein 11A; GAP, structural genomics consortium, GTPase activation, phosphoprotein, polymorphism hydrolase activator, SGC; 2.30A {Homo sapiens}
Probab=78.07 E-value=0.28 Score=27.69 Aligned_cols=31 Identities=55% Similarity=0.949 Sum_probs=22.3
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 2112455431057640274124688999999973
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFR 40 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr 40 (172)
....|||||||||||--++++ .+..++|-.|
T Consensus 4 ~~~~~~~~~~l~~~g~~~~~~---~~~~~~~~~r 34 (271)
T 3eap_A 4 HHHHSSGRENLYFQGMWDQRL---VRLALLQHLR 34 (271)
T ss_dssp ----------CHHHHTSCHHH---HHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCCCCHH---HHHHHHHHHH
T ss_conf 333442235531136653045---5079999999
No 77
>2i71_A Hypothetical protein; structural genomics, APC6294, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Sulfolobus solfataricus P2} SCOP: e.72.1.1
Probab=77.99 E-value=0.31 Score=27.40 Aligned_cols=17 Identities=94% Similarity=1.564 Sum_probs=13.7
Q ss_pred CCCCCCCCCCCEEEEEE
Q ss_conf 42112455431057640
Q T0576 6 HHHHHSSGRENLYFQGH 22 (172)
Q Consensus 6 hhhhhssgrenlyfqgh 22 (172)
.....||||||+||||-
T Consensus 6 ~~~~~~~~~~~~~~~~m 22 (400)
T 2i71_A 6 HHHHHSSGRENLYFQGM 22 (400)
T ss_dssp -------------CCCC
T ss_pred CCCCCCCCCCCCHHCCC
T ss_conf 44333567642011042
No 78
>2hxi_A Putative transcriptional regulator; structural genomics, APC6293, TETR family, PSI-2, protein structure initiative; 1.70A {Streptomyces coelicolor A3}
Probab=77.67 E-value=0.81 Score=24.76 Aligned_cols=44 Identities=55% Similarity=0.817 Sum_probs=31.2
Q ss_pred CCCCCCCCCCCEEEEEECCCCH---HHHHHHHHHHHHHC-CEEEEEEC
Q ss_conf 4211245543105764027412---46889999999736-81688741
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV---TDRIGQMILEMFRT-GMCLFSVR 49 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v---tdrig~milemfr~-gmclfsvr 49 (172)
.....||||||+|+||.+.++- .++|=.--+++|.. |.--+|++
T Consensus 6 ~~~~~~~~~~~~~~~g~~~~r~~~tre~Il~AA~~l~~e~G~~~~T~~ 53 (241)
T 2hxi_A 6 HHHHHSSGRENLYFQGHMAGRRRWSTEQILDAAAELLLAGDAETFSVR 53 (241)
T ss_dssp ----------------------CCCHHHHHHHHHHHHSSSSCCCCCHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 455578778766545888864200799999999999998292406699
No 79
>3dci_A Arylesterase; SGNH_hydrolase subfamily, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=77.38 E-value=0.37 Score=26.87 Aligned_cols=21 Identities=81% Similarity=1.376 Sum_probs=16.8
Q ss_pred CCCCCCCCCCCEEEEEECCCC
Q ss_conf 421124554310576402741
Q T0576 6 HHHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~ 26 (172)
.....|||||||+|+|||..-
T Consensus 6 ~~~~~~~~~~~~~~~g~~k~I 26 (232)
T 3dci_A 6 HHHHHSSGRENLYFQGHMKTV 26 (232)
T ss_dssp -----------------CEEE
T ss_pred CCCCCCCCCCCCCCCCCCCEE
T ss_conf 543245776566657889889
No 80
>2of7_A Putative TETR-family transcriptional regulator; APC7240, streptomyces coelicolor A3, structural genomics, PSI-2; 2.30A {Streptomyces coelicolor}
Probab=77.33 E-value=0.36 Score=26.92 Aligned_cols=20 Identities=85% Similarity=1.482 Sum_probs=16.2
Q ss_pred CCCCCCCCCCCEEEEEECCC
Q ss_conf 42112455431057640274
Q T0576 6 HHHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~ 25 (172)
.....||||||+||||++-.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~ 27 (260)
T 2of7_A 8 HHHHHSSGRENLYFQGHMAA 27 (260)
T ss_dssp --------------------
T ss_pred CCCCCCCCCCCCCCCCCCCC
T ss_conf 43466888644001167888
No 81
>2ki8_A Tungsten formylmethanofuran dehydrogenase, subunit D (FWDD-2); beta-barrel, structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus}
Probab=76.68 E-value=0.44 Score=26.40 Aligned_cols=19 Identities=89% Similarity=1.506 Sum_probs=15.5
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....+|||||+||+|++-
T Consensus 6 ~~~~~~~~~~~~~~k~~~~ 24 (146)
T 2ki8_A 6 HHHHHSSGRENLYFQGHML 24 (146)
T ss_dssp CCCCCCCCCCCCCCCCCCE
T ss_pred CCCCCCCCCHHHCCCCCCE
T ss_conf 3332356613222046630
No 82
>2v7s_A Probable conserved lipoprotein LPPA; unknown function, putative lipoprotein; 1.96A {Mycobacterium tuberculosis}
Probab=75.83 E-value=0.42 Score=26.52 Aligned_cols=19 Identities=42% Similarity=0.753 Sum_probs=14.8
Q ss_pred CCCCCCCCCEEEEEECCCC
Q ss_conf 1124554310576402741
Q T0576 8 HHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 8 hhhssgrenlyfqgh~~~~ 26 (172)
.....|.|||||||.||..
T Consensus 16 ~~~~~~~~~~~~~~tmd~~ 34 (215)
T 2v7s_A 16 LYKKAGSENLYFQGTMDHN 34 (215)
T ss_dssp -------------------
T ss_pred HHHHCCCCCEEEECCCCCC
T ss_conf 7775477432675233579
No 83
>3drw_A ADP-specific phosphofructokinase; AMP, cytoplasm, glycolysis, magnesium, metal-binding, transferase, structural genomics, PSI-2; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=75.57 E-value=0.38 Score=26.83 Aligned_cols=22 Identities=82% Similarity=1.375 Sum_probs=17.5
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....||||||||||+|+-|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~ 27 (474)
T 3drw_A 6 HHHHHSSGRENLYFQGHMIPEH 27 (474)
T ss_dssp ------CCSCCCTTTC-CCCTT
T ss_pred CCCCCCCCHHHHHHHCCCCCCC
T ss_conf 4433465348887402346888
No 84
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=75.56 E-value=0.82 Score=24.74 Aligned_cols=44 Identities=50% Similarity=0.935 Sum_probs=26.9
Q ss_pred CCCCCCCCCCCEEEEEECCCC----------------HHH---HHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 421124554310576402741----------------246---88999999973681688741887
Q T0576 6 HHHHHSSGRENLYFQGHVEPG----------------VTD---RIGQMILEMFRTGMCLFSVRSPG 52 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~----------------vtd---rig~milemfr~gmclfsvrspg 52 (172)
.....||||++||||+|+..- ..| .+|.++- +.|..++.=-.+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~a~elG~~La---~~G~~V~~GG~~G 68 (195)
T 1rcu_A 6 HHHHHSSGRENLYFQGHMKKVVVVGYSGPVNKSPVSELRDICLELGRTLA---KKGYLVFNGGRDG 68 (195)
T ss_dssp -----------------CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHH---HTTCEEEECCSSH
T ss_pred CCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH---HCCCEEECCCHHH
T ss_conf 33211105677556437647989974489999955899999999999999---8799999487274
No 85
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural genomics, structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum 3D7} PDB: 3e95_C
Probab=75.30 E-value=0.38 Score=26.78 Aligned_cols=18 Identities=89% Similarity=1.403 Sum_probs=14.4
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....|||||||||||-+-
T Consensus 4 ~~~~~~~~~~~~~~~~vp 21 (156)
T 2q0v_A 4 HHHHSSGRENLYFQGIVP 21 (156)
T ss_dssp ---------CCCCSSCCC
T ss_pred CCCCCCCCCCCEECCCCC
T ss_conf 444667712221032123
No 86
>2omo_A DUF176; structural genomics, APC6266, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.83A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=74.71 E-value=0.43 Score=26.44 Aligned_cols=18 Identities=94% Similarity=1.641 Sum_probs=14.8
Q ss_pred CCCCCCCCCCCEEEEEEC
Q ss_conf 421124554310576402
Q T0576 6 HHHHHSSGRENLYFQGHV 23 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~ 23 (172)
.....||||+|||||+.|
T Consensus 6 ~~~~~~~~~~~l~~~~~M 23 (124)
T 2omo_A 6 HHHHHSSGRENLYFQGHM 23 (124)
T ss_dssp ----------CCCCCCSS
T ss_pred CCCCCCCCCCCCEECCEE
T ss_conf 443223345431316468
No 87
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=74.48 E-value=1.9 Score=22.41 Aligned_cols=50 Identities=46% Similarity=0.781 Sum_probs=30.5
Q ss_pred CCCCCCCCCCCEEEEEECCCC-------------------------HHHHHHHHH--HHHHHCCEEEEEECCCCCHH
Q ss_conf 421124554310576402741-------------------------246889999--99973681688741887502
Q T0576 6 HHHHHSSGRENLYFQGHVEPG-------------------------VTDRIGQMI--LEMFRTGMCLFSVRSPGGVA 55 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~-------------------------vtdrig~mi--lemfr~gmclfsvrspg~va 55 (172)
.....||||+|+||||.++-+ +++.+-..+ |+-....-+.+-+.||||-.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Riifl~g~Id~~~a~~ii~~Ll~l~~~~~~~I~l~INSpGG~v 82 (215)
T 2f6i_A 6 HHHHHSSGRENLYFQGHMDIKDMKKDVKLFFFKKRIIYLTDEINKKTADELISQLLYLDNINHNDIKIYINSPGGSI 82 (215)
T ss_dssp ----------------CCCCSCSSHHHHHHHHTTTEEEECSCBCHHHHHHHHHHHHHHHHHCCSCEEEEEEECCBCH
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH
T ss_conf 44445789742244156653434004899986285899788007899999999999975689878499998999759
No 88
>2her_A Fragment, farnesyl pyrophosphate synthase; farnesyl diphosphate synthase, structural genomics, structural genomics consortium, SGC; HET: ZOL; 2.37A {Cryptosporidium parvum} PDB: 2o1o_A* 2q58_A*
Probab=73.15 E-value=0.62 Score=25.50 Aligned_cols=21 Identities=76% Similarity=1.252 Sum_probs=16.8
Q ss_pred CCCCCCCCCCCEEEEEECCCC
Q ss_conf 421124554310576402741
Q T0576 6 HHHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~ 26 (172)
.....||||||+||||+.+..
T Consensus 6 ~~~~~~s~~~~~~~~~~~~~~ 26 (368)
T 2her_A 6 HHHHHSSGRENLYFQGEYDYT 26 (368)
T ss_dssp -----------------CCCT
T ss_pred CCCCCCCCCCCCCCCCCCCHH
T ss_conf 443345673102455774186
No 89
>3kuz_A Plexin-C1; structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=71.84 E-value=0.53 Score=25.93 Aligned_cols=17 Identities=94% Similarity=1.533 Sum_probs=13.0
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....||||||+|||+-+
T Consensus 4 ~~~~~~~Re~~~y~~tl 20 (126)
T 3kuz_A 4 HHHHSSGRENLYFQGTV 20 (126)
T ss_dssp -------------CCEE
T ss_pred CCCCCCCCCEEEEEEEE
T ss_conf 34566774014631148
No 90
>3khd_A Pyruvate kinase; malaria, structural genomics, structural genomics consortium, SGC; 2.70A {Plasmodium falciparum 3D7}
Probab=70.24 E-value=0.69 Score=25.18 Aligned_cols=47 Identities=47% Similarity=0.902 Sum_probs=31.2
Q ss_pred CCCCCCCCCCEEEEEE----------------CCCCHH---HH-------HH------HHHHHHHHCCEEEEEEC-CCCC
Q ss_conf 2112455431057640----------------274124---68-------89------99999973681688741-8875
Q T0576 7 HHHHSSGRENLYFQGH----------------VEPGVT---DR-------IG------QMILEMFRTGMCLFSVR-SPGG 53 (172)
Q Consensus 7 hhhhssgrenlyfqgh----------------~~~~vt---dr-------ig------~milemfr~gmclfsvr-spg~ 53 (172)
....||||+||||||- |+++.. .| || .+|-+|...||-.|... |-|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~RkTKIIaTiGPas~~~e~l~~li~aGvdvfRiN~SHg~ 83 (520)
T 3khd_A 4 HHHHSSGRENLYFQGAAGASMQSAANITLRQILEPNNVNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGS 83 (520)
T ss_dssp ---------------CCSCCHHHHHTCCHHHHSCCC-CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSC
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 44456530332233423653012355215643476678866778639982378879999999999869999999899999
No 91
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=69.24 E-value=0.72 Score=25.09 Aligned_cols=16 Identities=94% Similarity=1.541 Sum_probs=13.4
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....|||||||||||-
T Consensus 4 ~~~~~~~r~~l~~~~p 19 (377)
T 3byv_A 4 HHHHSSGRENLYFQGP 19 (377)
T ss_dssp -------------CCT
T ss_pred CCCCCCCCCHHHCCCC
T ss_conf 4335555402100683
No 92
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=67.94 E-value=0.86 Score=24.59 Aligned_cols=85 Identities=31% Similarity=0.468 Sum_probs=43.2
Q ss_pred CEEEEEECC------------CCH-HHHH---HHHHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEEEECCEEEEEECCE
Q ss_conf 105764027------------412-4688---999999973681688741887502121784106774053467650121
Q T0576 16 NLYFQGHVE------------PGV-TDRI---GQMILEMFRTGMCLFSVRSPGGVAELYGGEARKVEITGTSLTIEREDW 79 (172)
Q Consensus 16 nlyfqgh~~------------~~v-tdri---g~milemfr~gmclfsvrspg~vaelyggearkv~i~gtsltiere~w 79 (172)
||||||||. +.| ..|. .+.--+..+.|...||--|-.---.+|-+...+-.+ -+-|
T Consensus 1 ~~~~~~~Mr~~FlACPYS~~d~~Vv~~Rf~aCn~~AA~i~~~G~a~fSqvsmSHPIn~~La~~d~~~i--------g~~W 72 (125)
T 1t1j_A 1 NLYFQGHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAI--------GRLW 72 (125)
T ss_dssp ------CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEEEHHHHHHHHHTTCTTSCHHHH--------HHHH
T ss_pred CCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHH--------HHCC
T ss_conf 94410211211257888898578999999999999999998078521332225709899841373666--------3101
Q ss_pred EEEE--EEE-EEEEEEEECCC-CCCCCEEEEEE
Q ss_conf 6777--532-22377674275-75786489999
Q T0576 80 HLHC--KLE-TVETVVFDLSP-KDNGGIRMAVV 108 (172)
Q Consensus 80 hlhc--~le-tvetvvfdlsp-k~nggirmavv 108 (172)
---- -++ --|-+|.||.- ++.+||++..-
T Consensus 73 a~id~~fm~~~eeLIvLdLpGWe~S~GikrEiE 105 (125)
T 1t1j_A 73 APVDAFYMDHLEELIVLDLPGWRDSAGIRREME 105 (125)
T ss_dssp HHHHHHHHHHCSEEEECCCTTGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHH
T ss_conf 131599999843102775687433313899999
No 93
>3g7r_A Putative transcriptional regulator; TETR, all-helical, structural genomics, PSI-2, protein structure initiative; 1.38A {Streptomyces coelicolor A3}
Probab=67.84 E-value=0.61 Score=25.53 Aligned_cols=44 Identities=43% Similarity=0.700 Sum_probs=25.7
Q ss_pred CCCCCCCCCCCEEEEEECCCCH---------HHHHHHHHHHHHHC-CEEEEEEC
Q ss_conf 4211245543105764027412---------46889999999736-81688741
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV---------TDRIGQMILEMFRT-GMCLFSVR 49 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v---------tdrig~milemfr~-gmclfsvr 49 (172)
.....|+||+|+||||+-...- -++|=.--+++|.. |.--+|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tR~~Il~AA~~l~~e~G~~~~T~~ 59 (221)
T 3g7r_A 6 HHHHHSSGRENLYFQGMSPSTEAAARTPSEARARLLGTATRIFYAEGIHSVGID 59 (221)
T ss_dssp ----------CCTTC-------------CHHHHHHHHHHHHHHHHHCSTTSCHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 334456554334348999999877688299999999999999998492407899
No 94
>2pus_A IBDV VP1 RNA-dependant RNA polymerase; RNA polymerase motifs, transferase; 2.40A {Infectious bursal disease virus} PDB: 2qj1_A 2r70_A 2r72_A 2pgg_A
Probab=67.76 E-value=1.5 Score=23.04 Aligned_cols=46 Identities=33% Similarity=0.517 Sum_probs=35.6
Q ss_pred EEHHHHCHHHCCCCCCC-HHHHHHHHHHHCCCCEEEEC----CCCEEECCCCCCCC
Q ss_conf 20110010006798787-67887765542014157704----67467526788888
Q T0576 117 VLRAAWLPRLMPETPSP-PEQFWAFTQRYIDLPMVVDA----RNRQLVFPGSGQGG 167 (172)
Q Consensus 117 vlraawlprlmp~tpsp-peqfwaftqryidlp~vvda----rnrqlv~pgsgqg~ 167 (172)
+|.+.|- +.-+| -.+|||..--+|.-+||||. +|-|+-+||-|-|.
T Consensus 443 LLTRgws-----~~G~P~~n~tWat~am~i~P~~vVD~~cv~~N~Q~k~~GQgSGN 493 (852)
T 2pus_A 443 ILTRGWS-----DNGDPMFNQTWATFAMNIAPALVVDSSCLIMNLQIKTYGQGSGN 493 (852)
T ss_dssp HHHHTSE-----ETTEESBCHHHHHHHHHTHHHHHBSCEEEEBTEEEECCSBCCCH
T ss_pred HHHCCCC-----CCCCCCCCCHHHHHHHHCCCCEEECHHHHHHHCCCCCCCCCCCC
T ss_conf 9963656-----68875756039999984088557610676640334778866773
No 95
>2r6i_A AGR_C_2717P, uncharacterized protein ATU1473; chaperone, structural genomics, APC6123, PSI-2, protein structure initiative; 2.59A {Agrobacterium tumefaciens str} SCOP: d.381.1.1
Probab=67.67 E-value=0.37 Score=26.90 Aligned_cols=16 Identities=100% Similarity=1.688 Sum_probs=13.5
Q ss_pred CCCCCCCCCCCEEEEE
Q ss_conf 4211245543105764
Q T0576 6 HHHHHSSGRENLYFQG 21 (172)
Q Consensus 6 hhhhhssgrenlyfqg 21 (172)
.....||||+|+||||
T Consensus 6 ~~~~~~~~~~~~~~~~ 21 (284)
T 2r6i_A 6 HHHHHSSGRENLYFQG 21 (284)
T ss_dssp ---------CHHHHHH
T ss_pred CCCCCCCCHHHHHHCC
T ss_conf 4433454057887510
No 96
>2wb6_A AFV1-102; archaeal virus, viral protein; 1.95A {Acidianus filamentous virus 1}
Probab=67.45 E-value=2 Score=22.34 Aligned_cols=36 Identities=33% Similarity=0.582 Sum_probs=24.7
Q ss_pred CCCCCCCCCCEEEEEECCCC-----HHHHHHHHHHHHHHCC
Q ss_conf 21124554310576402741-----2468899999997368
Q T0576 7 HHHHSSGRENLYFQGHVEPG-----VTDRIGQMILEMFRTG 42 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~-----vtdrig~milemfr~g 42 (172)
......|.|||||||-+|.. .+|-+..|.|-.-.-|
T Consensus 15 slykkagsenlyfqgivdknk~~ip~s~fldsmflvieklg 55 (130)
T 2wb6_A 15 SLYKKAGSENLYFQGIVDKNKIVIPMSEFLDSMFLVIEKLG 55 (130)
T ss_dssp GGGTTSCTHHHHHHSEECSSEEEEEHHHHHHHHHHHHHTTT
T ss_pred HHHHHCCCCCEEEECCCCCCCEECCHHHHHHHHHHHHHHHC
T ss_conf 68885687544885213567402448998887999998862
No 97
>3feh_A Centaurin-alpha-1; structural genomics consortium, GAP, GTPase activation, SGC, cytoplasm, metal-binding, nucleus, phosphoprotein, polymorphism; 1.90A {Homo sapiens} PDB: 3fm8_C
Probab=66.84 E-value=0.41 Score=26.62 Aligned_cols=25 Identities=60% Similarity=1.047 Sum_probs=11.6
Q ss_pred CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 12455431057640274124688999999973
Q T0576 9 HHSSGRENLYFQGHVEPGVTDRIGQMILEMFR 40 (172)
Q Consensus 9 hhssgrenlyfqgh~~~~vtdrig~milemfr 40 (172)
..||||||||||+. +.-+.|+++.+
T Consensus 6 ~~~~~~~~~~~~~~-------~~~~~~~~l~~ 30 (386)
T 3feh_A 6 HHSSGRENLYFQGK-------ERRRAVLELLQ 30 (386)
T ss_dssp -------CHHHHHH-------HHHHHHHHHHT
T ss_pred CCCCCCCCHHHCCH-------HHHHHHHHHHH
T ss_conf 56676543100209-------99999999962
No 98
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=66.48 E-value=0.93 Score=24.37 Aligned_cols=139 Identities=24% Similarity=0.239 Sum_probs=59.0
Q ss_pred CCCCCCCCCCEEEEEECCCCH------H---HHHHHHHHHHHHC-CEEEEE--ECCCCCHHHHCCCCCEEEEEECCEEEE
Q ss_conf 211245543105764027412------4---6889999999736-816887--418875021217841067740534676
Q T0576 7 HHHHSSGRENLYFQGHVEPGV------T---DRIGQMILEMFRT-GMCLFS--VRSPGGVAELYGGEARKVEITGTSLTI 74 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~v------t---drig~milemfr~-gmclfs--vrspg~vaelyggearkv~i~gtslti 74 (172)
....|||+||||||+.+.-.+ . .++-.-|++.++. -+.+.. +-++..+.+|..-...-+-|.|..
T Consensus 7 ~~~~~~~~e~l~~~~~~kIlviSDtH~~~~~~~l~~~i~~~~~~~D~iih~GD~~~~~~l~~l~~~~~~v~~V~GN~--- 83 (178)
T 2kkn_A 7 HHHHSSGRENLYFQGVKRFLLISDSHVPVRMASLPDEILNSLKEYDGVIGLGDYVDLDTVILLEKFSKEFYGVHGNM--- 83 (178)
T ss_dssp ---------------CEEEEEECCCCBTTTTCCCCHHHHHGGGGCSEEEESSCBSCHHHHHHHHHHTSSEEECCCSS---
T ss_pred CCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCC---
T ss_conf 33223304566551512899997789876400126999987358899999999877878899874279779998997---
Q ss_pred EECCEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCEEHHHHCHHHCCCCCCCHHHHHHHHHHHCCCCEEEECC
Q ss_conf 50121677753222377674275757864899997036667420110010006798787678877655420141577046
Q T0576 75 EREDWHLHCKLETVETVVFDLSPKDNGGIRMAVVFRDKHQAPVLRAAWLPRLMPETPSPPEQFWAFTQRYIDLPMVVDAR 154 (172)
Q Consensus 75 ere~whlhc~letvetvvfdlspk~nggirmavvf~dkhq~pvlraawlprlmp~tpsppeqfwaftqryidlp~vvdar 154 (172)
...+|- -.|.. ..+| +-+|.|..++-- |+.|.-....+.+..++.+. --++. -.-.|.+....
T Consensus 84 D~~~~~--~~lp~--~~~~-----~i~g~ri~l~HG--~~~~~~~~~~~~~~~~~~~d--ivi~G----HTH~p~~~~~~ 146 (178)
T 2kkn_A 84 DYPDVK--EHLPF--SKVL-----LVEGVTIGMCHG--WGAPWDLKDRLLKVFNEKPQ--VILFG----HTHEPEDTVKA 146 (178)
T ss_dssp SCGGGG--GTSCS--CEEE-----EETTEEEEECCS--CCCHHHHHHHHHHHSSSCCS--EEECC----SCSSCCEEEET
T ss_pred CCHHHH--HCCCC--EEEE-----EECCEEEEEECC--CCCCCHHHHHHHHHHCCCCC--EEEEC----CCCCCEEEEEC
T ss_conf 856888--40983--5899-----988849999889--77850266888886334899--99988----84760399999
Q ss_pred CCEEECCCCCC
Q ss_conf 74675267888
Q T0576 155 NRQLVFPGSGQ 165 (172)
Q Consensus 155 nrqlv~pgsgq 165 (172)
+.-++-|||--
T Consensus 147 g~~iiNPGS~~ 157 (178)
T 2kkn_A 147 GVRFLNPGSLA 157 (178)
T ss_dssp TEEEECCCCTT
T ss_pred CEEEEECCCCC
T ss_conf 99999699899
No 99
>2ali_A Hypothetical protein PA2801; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Pseudomonas aeruginosa} SCOP: d.38.1.1
Probab=66.17 E-value=0.94 Score=24.34 Aligned_cols=20 Identities=80% Similarity=1.350 Sum_probs=15.9
Q ss_pred CCCCCCCCCCEEEEEECCCC
Q ss_conf 21124554310576402741
Q T0576 7 HHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~ 26 (172)
....|+||+|+||+|+|..+
T Consensus 7 ~~~~~~~r~~~~~~~~~~~~ 26 (158)
T 2ali_A 7 HHHHSSGRENLYFQGHMADR 26 (158)
T ss_dssp --------------------
T ss_pred CCCCCCHHHHCCCCCCCCCC
T ss_conf 34456334532433336887
No 100
>2p82_A Cysteine protease ATG4A; autophagy, hydrolase, protein transport, thiol protease, transport, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: d.3.1.22
Probab=64.93 E-value=1 Score=24.11 Aligned_cols=15 Identities=100% Similarity=1.668 Sum_probs=12.7
Q ss_pred CCCCCCCCCCEEEEE
Q ss_conf 211245543105764
Q T0576 7 HHHHSSGRENLYFQG 21 (172)
Q Consensus 7 hhhhssgrenlyfqg 21 (172)
....||||||+||||
T Consensus 4 ~~~~~~~~~~~~~~~ 18 (355)
T 2p82_A 4 HHHHSSGRENLYFQG 18 (355)
T ss_dssp ---------------
T ss_pred CCCCCCCCCCEECCC
T ss_conf 455678975244069
No 101
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=64.22 E-value=0.94 Score=24.36 Aligned_cols=18 Identities=89% Similarity=1.433 Sum_probs=14.7
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....||||||+||||--+
T Consensus 4 ~~~~~~~~~~~~~~~~~e 21 (190)
T 3con_A 4 HHHHSSGRENLYFQGMTE 21 (190)
T ss_dssp ---------------CEE
T ss_pred CCCCCCCCCCCCCCCCCE
T ss_conf 555678997645479980
No 102
>3bn7_A Ferredoxin-like protein; NP_421070.1, stress responsive A/B barrel domain, structural genomics, joint center for structural genomics; HET: MSE; 1.64A {Caulobacter crescentus CB15}
Probab=64.19 E-value=2.8 Score=21.35 Aligned_cols=29 Identities=24% Similarity=0.376 Sum_probs=20.2
Q ss_pred CCCCEEEEEEC--------CCCHHHHHHHHHHHHHHC
Q ss_conf 54310576402--------741246889999999736
Q T0576 13 GRENLYFQGHV--------EPGVTDRIGQMILEMFRT 41 (172)
Q Consensus 13 grenlyfqgh~--------~~~vtdrig~milemfr~ 41 (172)
-.|||||||-+ .+.+++..-..+++.++.
T Consensus 11 ~~~~~~~~gMI~HiVlfk~K~~~~~e~~~~~~~~l~~ 47 (120)
T 3bn7_A 11 HHENLYFQGMLFHQVFFWLKNPGDKADRDKLIAGLKA 47 (120)
T ss_dssp --------CCEEEEEEEEESSTTCHHHHHHHHHHHHG
T ss_pred CHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 3454023676089999997799999999999999986
No 103
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI- 2, protein structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=63.89 E-value=0.77 Score=24.89 Aligned_cols=25 Identities=68% Similarity=1.079 Sum_probs=18.0
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHH
Q ss_conf 4211245543105764027412468
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDR 30 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdr 30 (172)
.....||||||||||+---++-..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~r~~~~~~ 30 (332)
T 2igt_A 6 HHHHHSSGRENLYFQGMQRTGELPA 30 (332)
T ss_dssp ---------CCSSCCCCCCCSCCCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 4433456642233466555665850
No 104
>3ded_A Probable hemolysin; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=62.93 E-value=1.2 Score=23.73 Aligned_cols=18 Identities=89% Similarity=1.433 Sum_probs=14.8
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....|||||+|+|++|=+
T Consensus 7 ~~~~~~~~e~~~f~~~D~ 24 (113)
T 3ded_A 7 HHHHSSGRENLYFQGHDG 24 (113)
T ss_dssp ------------------
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 333457752156368888
No 105
>2o9x_A Reductase, assembly protein; SAD, RAMP, helical protein, structural genomics, PSI, protein structure initiative; 3.40A {Archaeoglobus fulgidus} SCOP: a.184.1.1
Probab=62.74 E-value=0.99 Score=24.22 Aligned_cols=19 Identities=89% Similarity=1.562 Sum_probs=15.7
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....+|++||+|||+++.
T Consensus 6 ~~~~~~~~~~n~~~~~~~~ 24 (181)
T 2o9x_A 6 HHHHHSSGRENLYFQGHMR 24 (181)
T ss_dssp --------CCCSSSCCCHH
T ss_pred CCCCCCCCCCCHHHHHHHH
T ss_conf 3332345563020678999
No 106
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, acetylation, coiled COI nucleus, transcription, transcription regulation; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=62.45 E-value=0.87 Score=24.56 Aligned_cols=79 Identities=29% Similarity=0.367 Sum_probs=36.3
Q ss_pred CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEEEECCEEEEEECCEEEEEEEE--
Q ss_conf 124554310576402741246889999999736816887418875021217841067740534676501216777532--
Q T0576 9 HHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGVAELYGGEARKVEITGTSLTIEREDWHLHCKLE-- 86 (172)
Q Consensus 9 hhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~vaelyggearkv~i~gtsltiere~whlhc~le-- 86 (172)
...|.||||||||.+-.=+ .+.+. ..-..|=-..-++..++.-----|-+ +++++ +-+.|-| |+.-
T Consensus 5 ~~~~~~~~~~~~~~lpl~~-~~~~~-----~~p~lcGai~~~~~~~~~~Gd~VAA~--v~~~~---~eeeWIL-a~Vv~~ 72 (180)
T 3mea_A 5 HHHSSRENLYFQGTLPLWI-GKPGD-----KPPPLCGAIPASGDYVARPGDKVAAR--VKAVD---GDEQWIL-AEVVSY 72 (180)
T ss_dssp --------CCSTTCCCBCC-CCTTC-----CCCTTBTTCCCCTTCCCCTTCEEEEE--EECCC-----EEEEE-EEEEEE
T ss_pred CCCCCCCCEEEECCCCCCC-CCCCC-----CCCCCCCCCCCCCCCCCCCCCEEEEE--ECCCC---CCCCEEE-EEEEEE
T ss_conf 3455433147720102223-89999-----69976213258988748999999998--46789---8878899-999999
Q ss_pred ---EEEEEEEECCCCC
Q ss_conf ---2237767427575
Q T0576 87 ---TVETVVFDLSPKD 99 (172)
Q Consensus 87 ---tvetvvfdlspk~ 99 (172)
+..-.|-|--+.+
T Consensus 73 ~~~~~~YeV~D~D~e~ 88 (180)
T 3mea_A 73 SHATNKYEVDDIDEEG 88 (180)
T ss_dssp ETTTTEEEEEECCTTC
T ss_pred ECCCCEEEEECCCCCC
T ss_conf 4899889987899999
No 107
>2htd_A Predicted flavin-nucleotide-binding protein from COG3576 family structurally related...; ZP_00387536.1, structural genomics; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=61.97 E-value=2.2 Score=22.03 Aligned_cols=41 Identities=24% Similarity=0.525 Sum_probs=23.6
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCC
Q ss_conf 554310576402741246889999999736816887418875
Q T0576 12 SGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGG 53 (172)
Q Consensus 12 sgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~ 53 (172)
.-.|||||+| |+--.++++-.-+.++++...|..+--++.|
T Consensus 10 ~~~~~~~~~~-~~~~~~~~lt~e~~~fi~~~l~~lATv~~dG 50 (140)
T 2htd_A 10 HHHENLYFQG-MKKLNTNKLTEEQVNLFKNNLVYLATVDADG 50 (140)
T ss_dssp -----------CCBCSCSCCCHHHHHHHHHSCEEEEEECTTC
T ss_pred CCCCCCEECC-CCCCCHHHCCHHHHHHHHCCCEEEEEECCCC
T ss_conf 1221000135-4314611289999999861918999988999
No 108
>3eo3_A Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-acetylmannosamine kinase; non-protein kinase, sialic acid biosynthesis; 2.84A {Homo sapiens}
Probab=61.82 E-value=1.3 Score=23.43 Aligned_cols=17 Identities=88% Similarity=1.501 Sum_probs=13.7
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....|||||||||+|-|
T Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (333)
T 3eo3_A 4 HHHHSSGRENLYFQGTL 20 (333)
T ss_dssp ---------------CC
T ss_pred CCCCCCCCCCCCCCCCE
T ss_conf 66678998773268870
No 109
>3iug_A RHO/CDC42/RAC GTPase-activating protein RICS; structural genomics consortium (SGC), GAP, alternative splicing, cell junction, cell membrane; 1.77A {Homo sapiens}
Probab=61.53 E-value=1.3 Score=23.51 Aligned_cols=17 Identities=88% Similarity=1.441 Sum_probs=13.5
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....||||||+||+|.-
T Consensus 4 ~~~~~~~r~n~~~~~~~ 20 (229)
T 3iug_A 4 HHHHSSGRENLYFQGER 20 (229)
T ss_dssp --------------CCC
T ss_pred CCCCCCCCCCCCCCCCC
T ss_conf 44567774412368998
No 110
>3b8l_A Uncharacterized protein; YP_001165924.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.75A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=61.49 E-value=3.3 Score=20.98 Aligned_cols=27 Identities=37% Similarity=0.705 Sum_probs=19.9
Q ss_pred CCCCCCEEEEEECCCCHHHH--HHHHHHHH
Q ss_conf 45543105764027412468--89999999
Q T0576 11 SSGRENLYFQGHVEPGVTDR--IGQMILEM 38 (172)
Q Consensus 11 ssgrenlyfqgh~~~~vtdr--ig~milem 38 (172)
..-.||||||+ |+.-+.|| |-+.+..-
T Consensus 9 ~~~~~~~~~~~-M~~pleDr~aI~~L~~rY 37 (163)
T 3b8l_A 9 HHHHENLYFQG-MQCPIEDRLAIQDLMIAY 37 (163)
T ss_dssp --------CCC-CCCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHC-CCCCHHHHHHHHHHHHHH
T ss_conf 21212233304-999989999999999999
No 111
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=61.09 E-value=1.2 Score=23.76 Aligned_cols=21 Identities=76% Similarity=1.266 Sum_probs=16.3
Q ss_pred CCCCCCCCCCEEEEEECCCCH
Q ss_conf 211245543105764027412
Q T0576 7 HHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~v 27 (172)
....||||||+||||-++-++
T Consensus 4 ~~~~~s~~~~~~~~~~~~~Ki 24 (187)
T 3c5c_A 4 HHHHSSGRENLYFQGPLEVNL 24 (187)
T ss_dssp ----------------CEEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEE
T ss_conf 555688877666689977999
No 112
>2qng_A Uncharacterized protein SAV2460; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.40A {Streptomyces avermitilis}
Probab=60.26 E-value=1.4 Score=23.26 Aligned_cols=22 Identities=77% Similarity=1.233 Sum_probs=17.0
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....||||||||++|++-+--
T Consensus 6 ~~~~~~~~~~~~~~kG~~~~l~ 27 (199)
T 2qng_A 6 HHHHHSSGRENLYFQGHMNGLN 27 (199)
T ss_dssp ----------------------
T ss_pred CCCCCCCCCCEEEEECCCCCCC
T ss_conf 4320367862388764524699
No 113
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious diseases of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=59.87 E-value=0.7 Score=25.15 Aligned_cols=18 Identities=89% Similarity=1.534 Sum_probs=14.0
Q ss_pred CCCCCCCCCCCEEEEEEC
Q ss_conf 421124554310576402
Q T0576 6 HHHHHSSGRENLYFQGHV 23 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~ 23 (172)
.....|||||||||+|-.
T Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (353)
T 3erp_A 6 HHHHHSSGRENLYFQGMI 23 (353)
T ss_dssp -----------------C
T ss_pred CCCCCCCCCCCCEECCCC
T ss_conf 444356775561512453
No 114
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, signal, transferase, phosphorylation, transmembrane, tyrosine- protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=59.83 E-value=1.4 Score=23.18 Aligned_cols=18 Identities=83% Similarity=1.425 Sum_probs=15.0
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....|||+|||||||.+.
T Consensus 4 ~~~~~~g~e~~~~~~~~~ 21 (325)
T 3kul_A 4 HHHHSSGRENLYFQGKLP 21 (325)
T ss_dssp ------------------
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 667788875311225578
No 115
>1njk_A Hypothetical protein YBAW; structural genomics, thioesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: d.38.1.1
Probab=59.63 E-value=0.9 Score=24.46 Aligned_cols=26 Identities=69% Similarity=1.154 Sum_probs=19.5
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHH
Q ss_conf 42112455431057640274124688
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRI 31 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdri 31 (172)
.....||||||++||.+++..++-|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~Vr~ 31 (156)
T 1njk_A 6 HHHHHSSGRENLYFQGHMQTQIKVRG 31 (156)
T ss_dssp ----------------CEEEEEECCG
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEECH
T ss_conf 44445688765420461689989889
No 116
>2jpf_A Hypothetical protein; all alpha helical protein, type III secretion effector protein, structural genomics; NMR {Bordetella parapertussis}
Probab=59.61 E-value=1.5 Score=23.14 Aligned_cols=17 Identities=88% Similarity=1.454 Sum_probs=13.4
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....++|++|+||||.-
T Consensus 7 ~~~~~~~~~~~yfqgkq 23 (127)
T 2jpf_A 7 HHHHSSGRENLYFQGKQ 23 (127)
T ss_dssp ---------------CC
T ss_pred CHHHHHHHHHHHHHHHH
T ss_conf 10100026889998899
No 117
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=59.51 E-value=1.5 Score=23.13 Aligned_cols=56 Identities=45% Similarity=0.659 Sum_probs=34.2
Q ss_pred CCCCCCCCCCCEEEEEECCCCH----HHHHHHHHHHHHH---CCEEEEEEC--CCC---CHHHHCCCCC
Q ss_conf 4211245543105764027412----4688999999973---681688741--887---5021217841
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV----TDRIGQMILEMFR---TGMCLFSVR--SPG---GVAELYGGEA 62 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v----tdrig~milemfr---~gmclfsvr--spg---~vaelyggea 62 (172)
.....|||||||||||- .-+| +-+||+.-+.-+. .+.-|-.|- ++. .+++.||-++
T Consensus 6 ~~~~~~~~~~~~~~~gm-klrvgiIG~G~~g~~h~~~~~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~ 73 (357)
T 3ec7_A 6 HHHHHSSGRENLYFQGM-TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEA 73 (357)
T ss_dssp ----------------C-CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCC
T ss_pred CCCCCCCCHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCC
T ss_conf 44446766333421799-326999998299999999998469997899998899999999999839998
No 118
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=58.85 E-value=1.5 Score=23.05 Aligned_cols=15 Identities=100% Similarity=1.668 Sum_probs=12.5
Q ss_pred CCCCCCCCCCEEEEE
Q ss_conf 211245543105764
Q T0576 7 HHHHSSGRENLYFQG 21 (172)
Q Consensus 7 hhhhssgrenlyfqg 21 (172)
....|+||+||||||
T Consensus 7 ~~~~~~~~~~~y~~~ 21 (105)
T 3k3s_A 7 HHHHSSGRENLYFQG 21 (105)
T ss_dssp --------------C
T ss_pred CCCCCCCHHHHHHCC
T ss_conf 221456422032327
No 119
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}
Probab=58.09 E-value=1.6 Score=22.89 Aligned_cols=35 Identities=54% Similarity=0.849 Sum_probs=21.4
Q ss_pred CCCCCCCCCCCEEEEEE------CCCCHHHHHHHHHHHHHH
Q ss_conf 42112455431057640------274124688999999973
Q T0576 6 HHHHHSSGRENLYFQGH------VEPGVTDRIGQMILEMFR 40 (172)
Q Consensus 6 hhhhhssgrenlyfqgh------~~~~vtdrig~milemfr 40 (172)
.....|+|||||||||- +++.--..|-.++.|.++
T Consensus 6 ~~~~~~~g~~nl~~~g~~v~iR~~~~~D~~~l~~l~~e~~~ 46 (183)
T 3i9s_A 6 HHHHHSSGRENLYFQGMSVEIKRVDKHHCLDLVGIFIELER 46 (183)
T ss_dssp -----------------CCEEEECCGGGGGGGHHHHHHHHH
T ss_pred CCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 45656887516787797599998999999999999999999
No 120
>2ihi_A Pyrophosphate synthase; PV092040, structural genomics, structural genomics consortium, SGC, transferase; 2.00A {Plasmodium vivax sai-1} PDB: 3cc9_A* 3ez3_A*
Probab=57.78 E-value=1.6 Score=22.83 Aligned_cols=17 Identities=88% Similarity=1.413 Sum_probs=13.4
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....++||||+||||--
T Consensus 6 ~~~~~~g~~~~~~~~~~ 22 (395)
T 2ihi_A 6 HHHHSSGRENLYFQGMK 22 (395)
T ss_dssp -----------------
T ss_pred CCCCCCCCCCHHHHCHH
T ss_conf 45446786302430302
No 121
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomics, structural genomics consortium, SGC, alternative splicing, amino-acid biosynthesis; HET: PLP; 2.50A {Homo sapiens}
Probab=57.74 E-value=0.61 Score=25.53 Aligned_cols=42 Identities=33% Similarity=0.457 Sum_probs=31.6
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEE--EEECCC
Q ss_conf 245543105764027412468899999997368168--874188
Q T0576 10 HSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCL--FSVRSP 51 (172)
Q Consensus 10 hssgrenlyfqgh~~~~vtdrig~milemfr~gmcl--fsvrsp 51 (172)
..-|.||||||--+-..|-.++-+-+++..-+||-+ .|-|||
T Consensus 11 ~~~~~~~~~~~s~lP~~vl~~~~~~~~~~~~~g~sileisHRs~ 54 (377)
T 3e77_A 11 VDLGTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSS 54 (377)
T ss_dssp ----CCCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSH
T ss_pred CCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 56561344441139899999999998613798853112688987
No 122
>3bb5_A Stress responsive alpha-beta protein; YP_511867.1, dimeric ferredoxin-like protein of unknown function, stress responsive A/B barrel domain; HET: CIT; 2.30A {Jannaschia SP}
Probab=56.85 E-value=1.7 Score=22.71 Aligned_cols=11 Identities=64% Similarity=1.065 Sum_probs=8.7
Q ss_pred CCCCEEEEEEC
Q ss_conf 54310576402
Q T0576 13 GRENLYFQGHV 23 (172)
Q Consensus 13 grenlyfqgh~ 23 (172)
-.|||||||-+
T Consensus 11 ~~~~~~f~gMi 21 (121)
T 3bb5_A 11 HHENLYFQGML 21 (121)
T ss_dssp --------CCE
T ss_pred CHHHHHHCCCE
T ss_conf 13442440630
No 123
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium}
Probab=56.85 E-value=3.6 Score=20.72 Aligned_cols=36 Identities=50% Similarity=0.871 Sum_probs=23.7
Q ss_pred CCCCCCCCCCCEEEEEE------CCCCHHHHHHHHHHHHHHC
Q ss_conf 42112455431057640------2741246889999999736
Q T0576 6 HHHHHSSGRENLYFQGH------VEPGVTDRIGQMILEMFRT 41 (172)
Q Consensus 6 hhhhhssgrenlyfqgh------~~~~vtdrig~milemfr~ 41 (172)
.....||||||+||||- ..+.-.+.|-.++-+++..
T Consensus 6 ~~~~~~~g~~~~~~~g~~~~IR~a~~~D~~~i~~l~~~~~~~ 47 (176)
T 3fyn_A 6 HHHHHSSGRENLYFQGLSPQVRTAHIGDVPVLVRLMSEFYQE 47 (176)
T ss_dssp ----------CCGGGSSGGGEEECCGGGHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 545467898743783898788249789999999999999985
No 124
>3fk2_A Glucocorticoid receptor DNA-binding factor 1; structural genomics consortium, GTPase-activating protein, SGC, alternative splicing, anti-oncogene; 2.80A {Homo sapiens}
Probab=56.67 E-value=1.8 Score=22.65 Aligned_cols=17 Identities=88% Similarity=1.445 Sum_probs=13.6
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....|||||||||||.-
T Consensus 4 ~~~~~s~~~~~~~~~~~ 20 (246)
T 3fk2_A 4 HHHHSSGRENLYFQGDP 20 (246)
T ss_dssp -----------------
T ss_pred CCCCCCHHHHCCCCCCH
T ss_conf 32354205421424681
No 125
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=56.65 E-value=2.5 Score=21.70 Aligned_cols=129 Identities=24% Similarity=0.287 Sum_probs=58.8
Q ss_pred CCCCCCCCCEEEEEECCCCHHHHHH------HHHHHHHHCCEEEEE-ECCCCCHHHHCCCCCEEEEEECCEEEEEECCEE
Q ss_conf 1124554310576402741246889------999999736816887-418875021217841067740534676501216
Q T0576 8 HHHSSGRENLYFQGHVEPGVTDRIG------QMILEMFRTGMCLFS-VRSPGGVAELYGGEARKVEITGTSLTIEREDWH 80 (172)
Q Consensus 8 hhhssgrenlyfqgh~~~~vtdrig------~milemfr~gmclfs-vrspg~vaelyggearkv~i~gtsltiere~wh 80 (172)
....++-+|+|||+||+++-..-+. .-|-.|+.+|.-+=. .-.|.----+||-....+.|---.-|.+ +
T Consensus 15 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~e~~I~klL~AgvHlGh~~~np~Mk~YIyg~R~nGi~IIDL~kT~~----~ 90 (253)
T 3bch_A 15 VPRGSGTENLYFQGHMASGSSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWE----K 90 (253)
T ss_dssp ---------------------------CCCHHHHHHHHHHTTTBCCSCCCGGGGGGEEEECTTSCEEECHHHHHH----H
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHH----H
T ss_conf 345755202112442235788864424688999999997295307667797760503265689869977999999----9
Q ss_pred EEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCEEHHH-----------HCHHHCCCCCCCHHHHHHHHHHHCCCCE
Q ss_conf 77753222377674275757864899997036667420110-----------0100067987876788776554201415
Q T0576 81 LHCKLETVETVVFDLSPKDNGGIRMAVVFRDKHQAPVLRAA-----------WLPRLMPETPSPPEQFWAFTQRYIDLPM 149 (172)
Q Consensus 81 lhc~letvetvvfdlspk~nggirmavvf~dkhq~pvlraa-----------wlprlmp~tpsppeqfwaftqryidlp~ 149 (172)
|..-+ .++. + -.++|.-+.|.-+...+-+|..+| |+|-.....-.. ..+--||.+
T Consensus 91 L~~A~----~~i~--~-i~~~g~ILfVgTk~~~~~~V~k~A~~~g~~yv~~RWlgG~LTN~~~~-------~~~~Pdlii 156 (253)
T 3bch_A 91 LLLAA----RAIV--A-IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQA-------AFREPRLLV 156 (253)
T ss_dssp HHHHH----HHHH--T-CSSGGGEEEEECSHHHHHHHHHHHHHHCCEEEESCCCTTTTTCCSCS-------TTCSCSEEE
T ss_pred HHHHH----HHHH--H-HHCCCCEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCEECCHHHH-------CCCCCCEEE
T ss_conf 99999----9999--9-83899589997577578999999999699802467678602643320-------125686699
Q ss_pred EEECC
Q ss_conf 77046
Q T0576 150 VVDAR 154 (172)
Q Consensus 150 vvdar 154 (172)
|+|..
T Consensus 157 v~dp~ 161 (253)
T 3bch_A 157 VTDPR 161 (253)
T ss_dssp ESCTT
T ss_pred EECCH
T ss_conf 96722
No 126
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=55.86 E-value=3.9 Score=20.48 Aligned_cols=33 Identities=48% Similarity=0.764 Sum_probs=23.4
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 211245543105764027412468899999997
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMF 39 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemf 39 (172)
....|||||||||||.-...-.+.+-.-+++..
T Consensus 4 ~~~~s~gr~~l~~~~~~~~~~~~~~~~e~~~~~ 36 (413)
T 3dzo_A 4 HHHHSSGRENLYFQGFRGTDPGDVVIEELFNRI 36 (413)
T ss_dssp ---------CCCCCCCCSCCTTHHHHHHHHHHC
T ss_pred CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHC
T ss_conf 444566513321123456772466789887534
No 127
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structural genomics; 1.50A {Listeria monocytogenes str}
Probab=55.57 E-value=1.5 Score=23.15 Aligned_cols=27 Identities=48% Similarity=0.833 Sum_probs=16.8
Q ss_pred CCCCCCEEEEEE--------CCCCHHHHHHHHHHH
Q ss_conf 455431057640--------274124688999999
Q T0576 11 SSGRENLYFQGH--------VEPGVTDRIGQMILE 37 (172)
Q Consensus 11 ssgrenlyfqgh--------~~~~vtdrig~mile 37 (172)
|+||||+||||- .-+|.-+-...-|.+
T Consensus 1 ~~~~~~~~~~~m~~~~l~atc~~GlE~~la~El~~ 35 (393)
T 3k0b_A 1 SSGRENLYFQGMKSFQLVATAASGLEAIVGKEVAR 35 (393)
T ss_dssp CCSCCCGGGGTTCCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHH
T ss_conf 97523454367645899999288549999999997
No 128
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (ggdef & EAL domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans atcc 25259} PDB: 3ii8_A*
Probab=54.63 E-value=2 Score=22.31 Aligned_cols=18 Identities=94% Similarity=1.577 Sum_probs=14.5
Q ss_pred CCCCCCCCCCCEEEEEEC
Q ss_conf 421124554310576402
Q T0576 6 HHHHHSSGRENLYFQGHV 23 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~ 23 (172)
.....|||+||+|||++-
T Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (294)
T 2r6o_A 6 HHHHHSSGRENLYFQGHE 23 (294)
T ss_dssp ------------------
T ss_pred CCCCCCCCCHHHHHHHHH
T ss_conf 555567870899999999
No 129
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=54.12 E-value=1.8 Score=22.65 Aligned_cols=45 Identities=47% Similarity=0.730 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHH-------HHHHHHHHHH----HCCEEEEEECC
Q ss_conf 421124554310576402741246-------8899999997----36816887418
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTD-------RIGQMILEMF----RTGMCLFSVRS 50 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtd-------rig~milemf----r~gmclfsvrs 50 (172)
.....||||||+||||-...-+++ ..-++|-+.- ..-+.+.-||.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~s~~~~I~p~~L~~~l~~g~~~~~~~~~~IIDVR~ 61 (169)
T 3f4a_A 6 HHHHHSSGRENLYFQGMDSYSITNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG 61 (169)
T ss_dssp --------------------CCCSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS
T ss_pred CCCCCCCCCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCH
T ss_conf 44444567786664024455462187559999999998077666678759996873
No 130
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens}
Probab=53.76 E-value=1.9 Score=22.45 Aligned_cols=16 Identities=94% Similarity=1.541 Sum_probs=13.1
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....||||||||||+-
T Consensus 4 ~~~~ssg~~~~~~~~~ 19 (184)
T 3ihw_A 4 HHHHSSGRENLYFQGP 19 (184)
T ss_dssp ------------CCCC
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 5667899743325799
No 131
>3e6q_A Putative 5-carboxymethyl-2-hydroxymuconate isomerase; structural genomics, APC7683, PSI-2, protein structure initiative; HET: GOL IMD; 1.75A {Pseudomonas aeruginosa}
Probab=53.63 E-value=1.9 Score=22.47 Aligned_cols=15 Identities=100% Similarity=1.668 Sum_probs=12.4
Q ss_pred CCCCCCCCCCEEEEE
Q ss_conf 211245543105764
Q T0576 7 HHHHSSGRENLYFQG 21 (172)
Q Consensus 7 hhhhssgrenlyfqg 21 (172)
....||||||||||+
T Consensus 7 ~~~~~~~~~~~~~~~ 21 (146)
T 3e6q_A 7 HHHHSSGRENLYFQG 21 (146)
T ss_dssp ----------CCCCC
T ss_pred CCCCCCCCCCEEECC
T ss_conf 432446520110059
No 132
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, structural genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=53.54 E-value=3.4 Score=20.87 Aligned_cols=48 Identities=44% Similarity=0.773 Sum_probs=32.3
Q ss_pred CCCCCCCCCCEEEEEECCCCHHH----------------HHH------HHHHHHHHCCEEEEEEC-CCCCH
Q ss_conf 21124554310576402741246----------------889------99999973681688741-88750
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTD----------------RIG------QMILEMFRTGMCLFSVR-SPGGV 54 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtd----------------rig------~milemfr~gmclfsvr-spg~v 54 (172)
....||||||||||+--.+.+.. -|| .+|.+|+..||-.|-+- |-|+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rrTKIIaTiGPas~~~e~l~~L~~aG~dv~RiN~SHg~~ 74 (511)
T 3gg8_A 4 HHHHSSGRENLYFQGIRMSQILEPRSEEDWTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDH 74 (511)
T ss_dssp -----------------CTTTTCCCCHHHHTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCH
T ss_pred CCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 33332135541012344787628455677778886299832888699999999998799999998999999
No 133
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, palmitate, phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=52.68 E-value=3 Score=21.16 Aligned_cols=19 Identities=89% Similarity=1.522 Sum_probs=15.2
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....||||||+||+|.+-
T Consensus 6 ~~~~~~s~r~~~~~~~~~~ 24 (317)
T 2buj_A 6 HHHHHSSGRENLYFQGHMV 24 (317)
T ss_dssp ----------CCSEEEEEE
T ss_pred CCCCCCCCCCCEEECCCEE
T ss_conf 7676789986516638778
No 134
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural genomics consortium, SGC; 2.40A {Plasmodium falciparum 3D7}
Probab=51.28 E-value=2.5 Score=21.74 Aligned_cols=16 Identities=88% Similarity=1.464 Sum_probs=13.0
Q ss_pred CCCCCCCCCEEEEEEC
Q ss_conf 1124554310576402
Q T0576 8 HHHSSGRENLYFQGHV 23 (172)
Q Consensus 8 hhhssgrenlyfqgh~ 23 (172)
...|||||||||+|.-
T Consensus 5 ~~~~~~~~~~~~~~~~ 20 (214)
T 3eoz_A 5 HHHSSGRENLYFQGNT 20 (214)
T ss_dssp --------------CC
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 4567764232357998
No 135
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti}
Probab=51.26 E-value=2.2 Score=22.05 Aligned_cols=16 Identities=100% Similarity=1.688 Sum_probs=13.2
Q ss_pred CCCCCCCCCCCEEEEE
Q ss_conf 4211245543105764
Q T0576 6 HHHHHSSGRENLYFQG 21 (172)
Q Consensus 6 hhhhhssgrenlyfqg 21 (172)
.....|+||||||||+
T Consensus 6 ~~~~~~~~~~~~~~~~ 21 (359)
T 3lzk_A 6 HHHHHSSGRENLYFQG 21 (359)
T ss_dssp -------------CCC
T ss_pred CCCCCCCHHHHHHHCC
T ss_conf 4433342033331057
No 136
>3fy6_A Integron cassette protein; novel, oyster POND, woodshole,USA, unknown function, structural genomics, PSI-2, protein structure initiative; 2.10A {Vibrio cholerae}
Probab=51.06 E-value=2.3 Score=21.92 Aligned_cols=11 Identities=82% Similarity=1.286 Sum_probs=8.8
Q ss_pred CCCEEEEEECC
Q ss_conf 43105764027
Q T0576 14 RENLYFQGHVE 24 (172)
Q Consensus 14 renlyfqgh~~ 24 (172)
||||||||-.+
T Consensus 1 renlyfqgmte 11 (126)
T 3fy6_A 1 RENLYFQGMTE 11 (126)
T ss_dssp --------CEE
T ss_pred CCCEEEECCCE
T ss_conf 97413402345
No 137
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=50.66 E-value=2.9 Score=21.34 Aligned_cols=24 Identities=67% Similarity=1.190 Sum_probs=18.6
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHH
Q ss_conf 211245543105764027412468
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDR 30 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdr 30 (172)
....|+++||+||++.+....-.-
T Consensus 7 ~~~~s~~~e~~~f~~~lk~~l~el 30 (109)
T 1rwu_A 7 HHHHSSGRENLYFQGHMKTKLNEL 30 (109)
T ss_dssp ----------------CCCSSSCS
T ss_pred CCCCCCCCCHHHHHHHHHHCCHHH
T ss_conf 332456741489999885125888
No 138
>3h1n_A Probable glutathione S-transferase; APC84167, structural genomics, PSI-2, protein structure initiative; 1.83A {Bordetella bronchiseptica RB50}
Probab=50.60 E-value=1.8 Score=22.61 Aligned_cols=15 Identities=100% Similarity=1.668 Sum_probs=12.6
Q ss_pred CCCCCCCCCCEEEEE
Q ss_conf 211245543105764
Q T0576 7 HHHHSSGRENLYFQG 21 (172)
Q Consensus 7 hhhhssgrenlyfqg 21 (172)
....|||||||||++
T Consensus 5 ~~~~~~~~~~~~~~~ 19 (252)
T 3h1n_A 5 HHHHSSGRENLYFQG 19 (252)
T ss_dssp --------CCCGGGG
T ss_pred CCCCCCCCCCCCCCC
T ss_conf 445456775555489
No 139
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consortium, SGC, ATP-binding, coiled coil, cytoplasm, cytoskeleton; 2.30A {Homo sapiens}
Probab=50.33 E-value=2.6 Score=21.63 Aligned_cols=81 Identities=27% Similarity=0.405 Sum_probs=36.5
Q ss_pred CCCCCCCCCEEEEEECCCCHHHHHHHHHH-HHHHCCEEEEEECCCCCHHHHCCCCCEEEEEECCEEEEEECCEEEEEEEE
Q ss_conf 11245543105764027412468899999-99736816887418875021217841067740534676501216777532
Q T0576 8 HHHSSGRENLYFQGHVEPGVTDRIGQMIL-EMFRTGMCLFSVRSPGGVAELYGGEARKVEITGTSLTIEREDWHLHCKLE 86 (172)
Q Consensus 8 hhhssgrenlyfqgh~~~~vtdrig~mil-emfr~gmclfsvrspg~vaelyggearkv~i~gtsltiere~whlhc~le 86 (172)
...|||||++|+|+.+..+.+..--.-+- .-..++..++-.+ ++. +=|-+...||.=.+..|.| .||+++
T Consensus 5 ~~~~~~r~~~~~~~Gi~~~~~~p~L~nln~Dp~~s~~~~~~~~-~~~----~IGr~~~~dIvL~~~~Is~----~Ha~I~ 75 (124)
T 3fm8_A 5 HHHSSGRENLYFQGGIKVGDDKCFLVNLNADPALNELLVYYLK-EHT----LIGSANSQDIQLCGMGILP----EHCIID 75 (124)
T ss_dssp ----------------------CEEEETTCCTTSSCCCEEECC-SEE----EEESSTTCSEECCSTTCCS----SCEEEE
T ss_pred CCCCCCHHHHHHHCCEEECCCCCEEEEECCCCCCCCEEEEECC-CCE----EECCCCCCCEEECCCCCCH----HHEEEE
T ss_conf 3445306899975884108994369985798332713999869-984----9858854799989998684----248999
Q ss_pred EEE--EEEEECCC
Q ss_conf 223--77674275
Q T0576 87 TVE--TVVFDLSP 97 (172)
Q Consensus 87 tve--tvvfdlsp 97 (172)
.-+ .++.|++.
T Consensus 76 ~~~~~~~i~~~~s 88 (124)
T 3fm8_A 76 ITSEGQVMLTPQK 88 (124)
T ss_dssp ECTTSCEEEEECT
T ss_pred EECCEEEEEECCC
T ss_conf 9099679995798
No 140
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=50.30 E-value=2.6 Score=21.62 Aligned_cols=17 Identities=94% Similarity=1.550 Sum_probs=14.1
Q ss_pred CCCCCCCCCCCEEEEEE
Q ss_conf 42112455431057640
Q T0576 6 HHHHHSSGRENLYFQGH 22 (172)
Q Consensus 6 hhhhhssgrenlyfqgh 22 (172)
.....||||||+||||-
T Consensus 6 ~~~~~~~~r~~~~~~~~ 22 (141)
T 3ghj_A 6 HHHHHSSGRENLYFQGV 22 (141)
T ss_dssp -----------------
T ss_pred CCCCCCCCCCCCEECCC
T ss_conf 44545799876404068
No 141
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, PSI-2, protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=50.19 E-value=4.7 Score=19.95 Aligned_cols=57 Identities=42% Similarity=0.648 Sum_probs=37.6
Q ss_pred CCCCCCCCCCCEEEEEE--CCCCHHHHHHHHHHHHHH-CCEEEE-EECCCCCHHHHCCCCC
Q ss_conf 42112455431057640--274124688999999973-681688-7418875021217841
Q T0576 6 HHHHHSSGRENLYFQGH--VEPGVTDRIGQMILEMFR-TGMCLF-SVRSPGGVAELYGGEA 62 (172)
Q Consensus 6 hhhhhssgrenlyfqgh--~~~~vtdrig~milemfr-~gmclf-svrspg~vaelyggea 62 (172)
.....|+||+|+||+|- .=-|-|-.||+.+.+.+. .|..+. -+|+|....++-.-..
T Consensus 6 ~~~~~~~~~~~~~~~~MKVlVtGatG~iG~~lv~~L~~~g~~V~al~R~~~~~~~~~~~~~ 66 (236)
T 3e8x_A 6 HHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGA 66 (236)
T ss_dssp ---------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHCCC
T ss_conf 5554688864457689919999998889999999999785989999888587702441265
No 142
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), SH3 domain, endocytosis; 1.56A {Homo sapiens} PDB: 1ki1_B
Probab=50.17 E-value=2.6 Score=21.60 Aligned_cols=35 Identities=51% Similarity=0.820 Sum_probs=20.8
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHC
Q ss_conf 21124554310576402741246889999999736
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRT 41 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr~ 41 (172)
....|||+||+||||.--+.-.-+--..|.|+..|
T Consensus 4 ~~~~~~~~~~~~~~~~~l~~~e~kR~~vi~Eli~T 38 (510)
T 3jzy_A 4 HHHHSSGRENLYFQGDTMQPIERKRQGYIHELIQT 38 (510)
T ss_dssp -----------------------------------
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 45567776666546677999999999999999999
No 143
>3f5r_A FACT complex subunit POB3; APC7736, FACT complex (SPT16P-POB3P), structural genomics, PSI-2, protein structure initiative; 1.70A {Saccharomyces cerevisiae}
Probab=49.83 E-value=2.5 Score=21.67 Aligned_cols=19 Identities=84% Similarity=1.380 Sum_probs=14.3
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....+|||+||||+|-..
T Consensus 6 ~~~~~~~~~~~~~~~~~t~ 24 (191)
T 3f5r_A 6 HHHHHSSGRENLYFQGMST 24 (191)
T ss_dssp --------------CCSSE
T ss_pred CCCCCCCCCEEEEECCCCC
T ss_conf 4432345420688715302
No 144
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, cytoplasm, HOST-virus interaction, polymorphism; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=49.43 E-value=2.7 Score=21.48 Aligned_cols=12 Identities=58% Similarity=1.118 Sum_probs=9.9
Q ss_pred CCCEEEEEECCC
Q ss_conf 431057640274
Q T0576 14 RENLYFQGHVEP 25 (172)
Q Consensus 14 renlyfqgh~~~ 25 (172)
..||||||||..
T Consensus 13 gqnlyfqghmat 24 (380)
T 3c3r_A 13 GQNLYFQGHMAT 24 (380)
T ss_dssp ----------CC
T ss_pred CCCEEEECCEEE
T ss_conf 763166213112
No 145
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=48.99 E-value=3 Score=21.18 Aligned_cols=18 Identities=78% Similarity=1.221 Sum_probs=14.4
Q ss_pred CCCCCCCCCEEEEEECCC
Q ss_conf 112455431057640274
Q T0576 8 HHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 8 hhhssgrenlyfqgh~~~ 25 (172)
...||||||++|||--+-
T Consensus 5 ~~~~s~~~~~~~~~~P~~ 22 (90)
T 3h8m_A 5 HHHSSGRENLYFQGTPDF 22 (90)
T ss_dssp --------------CCCC
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 457889888654799999
No 146
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=48.95 E-value=3.3 Score=20.94 Aligned_cols=38 Identities=50% Similarity=0.794 Sum_probs=26.2
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 4211245543105764027412468899999997368168874
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSV 48 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsv 48 (172)
.....|||||||+||+-+ -||..-+-++-+....-+++
T Consensus 6 ~~~~~~~~~e~~~~q~a~-----kRl~kEl~~l~~~~~~gi~v 43 (166)
T 2ayv_A 6 HHHHHSSGRENLYFQGAL-----KRINKELNDLSKDPPTNCSA 43 (166)
T ss_dssp -------------CTTHH-----HHHHHHHHHHHHSCCTTEEE
T ss_pred CCCCCCCCCCCCCHHHHH-----HHHHHHHHHHHHCCCCCEEE
T ss_conf 433235763320568999-----99999999997689998599
No 147
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=48.86 E-value=2.8 Score=21.39 Aligned_cols=21 Identities=76% Similarity=1.293 Sum_probs=16.3
Q ss_pred CCCCCCCCCCEEEEEECCCCH
Q ss_conf 211245543105764027412
Q T0576 7 HHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~v 27 (172)
....||+|||+||||.-..+-
T Consensus 4 ~~~~~~~~~~~~~~~~~~~g~ 24 (173)
T 2nq3_A 4 HHHHSSGRENLYFQGMSDSGS 24 (173)
T ss_dssp ---------------------
T ss_pred CCCCCCCCCCEEEECCCCCCC
T ss_conf 333445534410341467777
No 148
>3hk4_A MLR7391 protein; NP_107719.1, NTF2-like protein of unknown function, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=48.77 E-value=6.9 Score=18.94 Aligned_cols=27 Identities=37% Similarity=0.676 Sum_probs=14.8
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
Q ss_conf 5543105764027412468899999997368
Q T0576 12 SGRENLYFQGHVEPGVTDRIGQMILEMFRTG 42 (172)
Q Consensus 12 sgrenlyfqgh~~~~vtdrig~milemfr~g 42 (172)
--.||||||| |..+ .|-+-.++.+.+|
T Consensus 10 ~~~e~~~~q~-Ms~~---eiv~~~~~a~~~g 36 (136)
T 3hk4_A 10 HHHENLYFQG-MTIA---EIAKDFTELLKQG 36 (136)
T ss_dssp ---------C-CCHH---HHHHHHHHHHHTT
T ss_pred CCCCCCCCCC-CCHH---HHHHHHHHHHHCC
T ss_conf 2301130068-9999---9999999999859
No 149
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genomics consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum}
Probab=48.60 E-value=1.4 Score=23.23 Aligned_cols=16 Identities=94% Similarity=1.518 Sum_probs=13.2
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....|||||||||+|-
T Consensus 4 ~~~~~~~~~~~~~~~~ 19 (191)
T 3k21_A 4 HHHHSSGRENLYFQGI 19 (191)
T ss_dssp ----------CHHHHH
T ss_pred CCCCCCCHHHCCCCCH
T ss_conf 3447766110566759
No 150
>3bde_A MLL5499 protein; NP_106155.1, domain of unknown function with A ferredoxin- like fold, stress responsive A/B barrel domain; 1.79A {Mesorhizobium loti MAFF303099}
Probab=48.18 E-value=2.8 Score=21.42 Aligned_cols=12 Identities=58% Similarity=1.024 Sum_probs=9.2
Q ss_pred CCCCEEEEEECC
Q ss_conf 543105764027
Q T0576 13 GRENLYFQGHVE 24 (172)
Q Consensus 13 grenlyfqgh~~ 24 (172)
-.|||||||-+.
T Consensus 11 ~~~~~~~~gMI~ 22 (120)
T 3bde_A 11 HHENLYFQGMIR 22 (120)
T ss_dssp -------CCCEE
T ss_pred CHHHCCCCCCEE
T ss_conf 345415688608
No 151
>3epz_A DNA (cytosine-5)-methyltransferase 1; winged helix domain, SH3-like barrel, cell cycle, metal binding, DNA binding,DNA replication; HET: DNA BGC; 2.31A {Homo sapiens}
Probab=47.39 E-value=3 Score=21.20 Aligned_cols=17 Identities=88% Similarity=1.417 Sum_probs=13.4
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....|+||||+||||-.
T Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (268)
T 3epz_A 4 HHHHSSGRENLYFQGPK 20 (268)
T ss_dssp --------------CCB
T ss_pred CCCCCCCCHHHHCCCCC
T ss_conf 44455541233037998
No 152
>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A
Probab=47.13 E-value=3.2 Score=21.06 Aligned_cols=15 Identities=47% Similarity=0.747 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEECCC
Q ss_conf 455431057640274
Q T0576 11 SSGRENLYFQGHVEP 25 (172)
Q Consensus 11 ssgrenlyfqgh~~~ 25 (172)
-...|||||||.|..
T Consensus 14 ~~~~~~~~~~~~Ms~ 28 (182)
T 2i32_A 14 IPTTENLYFQGSMAK 28 (182)
T ss_dssp ------------CCS
T ss_pred CCCCCCEEEECCEEE
T ss_conf 876232277531358
No 153
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for structural proteomics; NMR {Agrobacterium tumefaciens str}
Probab=46.99 E-value=3.1 Score=21.10 Aligned_cols=17 Identities=94% Similarity=1.574 Sum_probs=13.8
Q ss_pred CCCCCCCCCCCEEEEEE
Q ss_conf 42112455431057640
Q T0576 6 HHHHHSSGRENLYFQGH 22 (172)
Q Consensus 6 hhhhhssgrenlyfqgh 22 (172)
.....|+||||+|||+-
T Consensus 6 ~~~~~s~~re~~~~q~~ 22 (85)
T 2k2p_A 6 HHHHHSSGRENLYFQGA 22 (85)
T ss_dssp ----------------C
T ss_pred CCCCCCCCCHHHHCCCC
T ss_conf 43425566113540688
No 154
>2i32_E Histone regulatory homolog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens}
Probab=46.96 E-value=3.1 Score=21.10 Aligned_cols=29 Identities=38% Similarity=0.532 Sum_probs=20.6
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHCC
Q ss_conf 43105764027412468899999997368
Q T0576 14 RENLYFQGHVEPGVTDRIGQMILEMFRTG 42 (172)
Q Consensus 14 renlyfqgh~~~~vtdrig~milemfr~g 42 (172)
.|||||||...++|..-+.---||-.|..
T Consensus 1 senlyf~~~~~~~va~~vngesledirkn 29 (57)
T 2i32_E 1 SENLYFQGSSATSVAGVVNGESLEDIRKN 29 (57)
T ss_dssp -----------------------------
T ss_pred CCCEEEECCCCCHHHHCCCCCCHHHHHHH
T ss_conf 98446755788116550163009999987
No 155
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=46.95 E-value=3.3 Score=20.91 Aligned_cols=22 Identities=86% Similarity=1.429 Sum_probs=17.0
Q ss_pred CCCCCCCCCCCEEEEEECCCCH
Q ss_conf 4211245543105764027412
Q T0576 6 HHHHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~v 27 (172)
.....|+||+||||+++-..||
T Consensus 6 ~~~~~~~~~~~~~~~~~qp~Gv 27 (125)
T 2hga_A 6 HHHHHSSGRENLYFQGHQPDGV 27 (125)
T ss_dssp -----------------CCCCE
T ss_pred CCCCCCCHHCCCCCCCCCCCCE
T ss_conf 2442452100356567899808
No 156
>1tf1_A Negative regulator of allantoin and glyoxylate utilization operons; midwest center for structural genomics, GLCR, ligand binding domain; 1.80A {Escherichia coli} SCOP: d.110.2.2
Probab=46.38 E-value=1.5 Score=23.11 Aligned_cols=42 Identities=45% Similarity=0.820 Sum_probs=25.7
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH--C-CEEEEEECC
Q ss_conf 42112455431057640274124688999999973--6-816887418
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFR--T-GMCLFSVRS 50 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr--~-gmclfsvrs 50 (172)
.....|+||++|||++|+| +. ++..-+|+.+. + -.|.++++.
T Consensus 6 ~~~~~~~gr~~l~~~~~~d--l~-~~A~P~L~~L~~~tgetv~L~v~~ 50 (198)
T 1tf1_A 6 HHHHHSSGRENLYFQGHMD--VL-SVAGPFMRRLMLLSGETVNVAIRN 50 (198)
T ss_dssp -------CTTSTTCHHHHH--HH-HHHHHHHHHHHHHHCSEEEEEEEE
T ss_pred CCCHHHHHHHHHHEECCCC--HH-HHHHHHHHHHHHHHCCEEEEEEEE
T ss_conf 1003544665422203599--89-999999999999879969999999
No 157
>2fgy_A Carboxysome shell polypeptide; beta class of carbonic anhydrase, lyase; 2.20A {Halothiobacillus neapolitanus}
Probab=46.10 E-value=3.3 Score=20.97 Aligned_cols=17 Identities=47% Similarity=0.624 Sum_probs=11.7
Q ss_pred CCCCCEEEEEECCCCHH
Q ss_conf 55431057640274124
Q T0576 12 SGRENLYFQGHVEPGVT 28 (172)
Q Consensus 12 sgrenlyfqgh~~~~vt 28 (172)
...|||||||-|.++-|
T Consensus 15 ~~~~~~~~~~~~~~~~~ 31 (542)
T 2fgy_A 15 PTTENLYFQGAMGSMNT 31 (542)
T ss_dssp -----------------
T ss_pred CCCCCEEEECCCCCCCC
T ss_conf 76442145314356766
No 158
>3cxg_A Putative thioredoxin; malaria, structural genomics, oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum 3D7}
Probab=46.06 E-value=3.8 Score=20.53 Aligned_cols=16 Identities=94% Similarity=1.589 Sum_probs=13.5
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....||||+|+||||.
T Consensus 4 ~~~~~~~~~~~~~~~~ 19 (133)
T 3cxg_A 4 HHHHSSGRENLYFQGQ 19 (133)
T ss_dssp -----CEEEEEEEETT
T ss_pred CCCCCCCCCCEEECCC
T ss_conf 4446665212332488
No 159
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, structural genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=45.98 E-value=2.7 Score=21.46 Aligned_cols=24 Identities=79% Similarity=1.234 Sum_probs=16.7
Q ss_pred CCCCCCCCCCCCEEEEEECCCCHHH
Q ss_conf 4421124554310576402741246
Q T0576 5 HHHHHHSSGRENLYFQGHVEPGVTD 29 (172)
Q Consensus 5 hhhhhhssgrenlyfqgh~~~~vtd 29 (172)
......|+|||||||++. ...|.|
T Consensus 5 ~~~~~~~~~~~n~~~~~~-~~~V~d 28 (165)
T 3fhm_A 5 HHHHHHSSGRENLYFQGM-ATFVKD 28 (165)
T ss_dssp -----------CCCCSSS-SCBHHH
T ss_pred CCCCCCCCCCCCCCCCHH-HCCHHH
T ss_conf 544434666643321001-141999
No 160
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A*
Probab=44.91 E-value=3.5 Score=20.78 Aligned_cols=47 Identities=43% Similarity=0.732 Sum_probs=27.6
Q ss_pred CCCCEEEEEECCCC------H----HHHHHHHHHHHHHCC---EEEEEECCCCCHHHHCCCC
Q ss_conf 54310576402741------2----468899999997368---1688741887502121784
Q T0576 13 GRENLYFQGHVEPG------V----TDRIGQMILEMFRTG---MCLFSVRSPGGVAELYGGE 61 (172)
Q Consensus 13 grenlyfqgh~~~~------v----tdrig~milemfr~g---mclfsvrspg~vaelygge 61 (172)
.-||+||||||-.. | ..|. .-+.+.|+.- ---|-+|+||-| .|.|.-
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~F~~~~g~~P~~~vsAPGRV-~L~GEH 70 (478)
T 2a2c_A 11 SSENLYFQGHMATESPATRRVQVAEHPRL-LKLKEMFNSKFGSIPKFYVRAPGRV-NIIGEH 70 (478)
T ss_dssp -----------CCCCCCEEEECGGGCHHH-HHHHHHHHHHHSSCCSEEEEEEEEE-EEECTT
T ss_pred CCCHHHHHHHHHCCCCCCCCCCHHHHHHH-HHHHHHHHHHHCCCCCEEEECCEEE-EEECCC
T ss_conf 43023543011034775565685456799-9999999998789985999898058-965687
No 161
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=44.88 E-value=3.5 Score=20.78 Aligned_cols=16 Identities=94% Similarity=1.560 Sum_probs=13.1
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....||||||+||++.
T Consensus 4 ~~~~~~g~~~~~~~~~ 19 (196)
T 3llu_A 4 HHHHSSGRENLYFQGS 19 (196)
T ss_dssp ----------------
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 5667897431002688
No 162
>3kdw_A Putative sugar binding protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482} PDB: 3g6i_A*
Probab=44.73 E-value=3.4 Score=20.84 Aligned_cols=16 Identities=50% Similarity=0.779 Sum_probs=12.3
Q ss_pred CCCCCCEEEEEECCCC
Q ss_conf 4554310576402741
Q T0576 11 SSGRENLYFQGHVEPG 26 (172)
Q Consensus 11 ssgrenlyfqgh~~~~ 26 (172)
..-.|||||||.+|-.
T Consensus 9 ~~~~~~~~~~~av~l~ 24 (221)
T 3kdw_A 9 HHHHENLYFQGAVDLD 24 (221)
T ss_dssp -----CCCCCCSSCCC
T ss_pred CCCHHHHHHCCCCCCC
T ss_conf 0003444320201135
No 163
>1lql_A OSMC, osmotical inducible protein C like family; NEW fold, structural genomics, BSGC structure funded by NIH, protein structure initiative; 2.85A {Mycoplasma pneumoniae} SCOP: d.227.1.1
Probab=44.12 E-value=3.7 Score=20.67 Aligned_cols=17 Identities=47% Similarity=0.790 Sum_probs=13.2
Q ss_pred CCCCCCEEEEEECCCCH
Q ss_conf 45543105764027412
Q T0576 11 SSGRENLYFQGHVEPGV 27 (172)
Q Consensus 11 ssgrenlyfqgh~~~~v 27 (172)
-...+|+||||+++.++
T Consensus 14 i~~~~n~~~q~~~~~~~ 30 (166)
T 1lql_A 14 IPTTENLYFQGHMDKKY 30 (166)
T ss_dssp ------------CCEEE
T ss_pred CCCCCCEEEECCCEEEE
T ss_conf 88744113750101541
No 164
>3i3c_A Chromobox protein homolog 5; CBX5, chromo shadow domain, structural genomics, structural genomics consortium, SGC, centromere, nucleus; 2.48A {Homo sapiens}
Probab=43.74 E-value=4.2 Score=20.27 Aligned_cols=15 Identities=73% Similarity=1.086 Sum_probs=12.4
Q ss_pred CCCCCCEEEEEECCC
Q ss_conf 455431057640274
Q T0576 11 SSGRENLYFQGHVEP 25 (172)
Q Consensus 11 ssgrenlyfqgh~~~ 25 (172)
||||+|+|||+..|.
T Consensus 1 ~~~~~~~~~~~~~d~ 15 (75)
T 3i3c_A 1 SSGRENLYFQGSNDI 15 (75)
T ss_dssp ------------CTT
T ss_pred CCCCCCCCCCCCCCC
T ss_conf 998665222178876
No 165
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=42.45 E-value=4 Score=20.40 Aligned_cols=16 Identities=56% Similarity=0.860 Sum_probs=11.9
Q ss_pred CCCCCCEEEEEECCCC
Q ss_conf 4554310576402741
Q T0576 11 SSGRENLYFQGHVEPG 26 (172)
Q Consensus 11 ssgrenlyfqgh~~~~ 26 (172)
.|..||||||+||---
T Consensus 9 ~~~~~~~~~~~~~~~~ 24 (181)
T 2q37_A 9 HSSGENLYFQGHMAME 24 (181)
T ss_dssp ----------------
T ss_pred CCCCCHHHHHHHHHHH
T ss_conf 4665107898752488
No 166
>2poy_A 20K cyclophilin, putative; cyclophilin, structural genomics, structural genomics consortium, SGC, isomerase; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=42.41 E-value=4 Score=20.43 Aligned_cols=16 Identities=94% Similarity=1.589 Sum_probs=13.3
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....||||||+|+||.
T Consensus 4 ~~~~~~~~~~~~~~~n 19 (186)
T 2poy_A 4 HHHHSSGRENLYFQGN 19 (186)
T ss_dssp --------------CC
T ss_pred CCCCCCCCHHHHHCCC
T ss_conf 4334443012331599
No 167
>3g0k_A Putative membrane protein; YP_498150.1, protein of unknown function with A cystatin- like fold; HET: MSE; 1.30A {Novosphingobium aromaticivorans DSM12444}
Probab=42.34 E-value=11 Score=17.76 Aligned_cols=30 Identities=30% Similarity=0.572 Sum_probs=22.8
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHC
Q ss_conf 554310576402741246889999999736
Q T0576 12 SGRENLYFQGHVEPGVTDRIGQMILEMFRT 41 (172)
Q Consensus 12 sgrenlyfqgh~~~~vtdrig~milemfr~ 41 (172)
--.|||||||--....+..-..++.++|..
T Consensus 10 ~~~~~~~f~~~~~~a~~e~Nk~lV~~~~~~ 39 (148)
T 3g0k_A 10 HHHENLYFQGMARTAEEQANHDLVIEMYNK 39 (148)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 231211254143130477899999999999
No 168
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, structural genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=41.83 E-value=4.1 Score=20.35 Aligned_cols=25 Identities=68% Similarity=1.226 Sum_probs=19.2
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHH
Q ss_conf 4211245543105764027412468
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDR 30 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdr 30 (172)
.....||||+|+++|++++..+.+-
T Consensus 6 ~~~~~~sg~~~~~~q~~i~~~i~~i 30 (105)
T 2jq4_A 6 HHHHHSSGRENLYFQGHMNATIREI 30 (105)
T ss_dssp -----------------CHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 3343367863278899999999999
No 169
>3gk6_A Integron cassette protein VCH_CASS2; novel, oyster POND, woods HOLE, USA, structural genomics, PSI-2, protein structure initiative; HET: MSE PE4; 1.80A {Vibrio cholerae}
Probab=41.55 E-value=6.5 Score=19.10 Aligned_cols=16 Identities=100% Similarity=1.688 Sum_probs=12.6
Q ss_pred CCCCCCCCCCCEEEEE
Q ss_conf 4211245543105764
Q T0576 6 HHHHHSSGRENLYFQG 21 (172)
Q Consensus 6 hhhhhssgrenlyfqg 21 (172)
.....|||+||+||++
T Consensus 6 ~~~~~~~~~~~~~~~~ 21 (170)
T 3gk6_A 6 HHHHHSSGRENLYFQG 21 (170)
T ss_dssp ---------CCCEEEE
T ss_pred CCCCCCCCCCCCEEEE
T ss_conf 4323467764635701
No 170
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, alternative splicing, GTPase activation, metal-binding, phorbol-ester binding; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=41.22 E-value=4.3 Score=20.24 Aligned_cols=31 Identities=55% Similarity=0.752 Sum_probs=20.7
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHC
Q ss_conf 21124554310576402741246889999999736
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRT 41 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr~ 41 (172)
....||||||+|+|+--.+... ++.+|-..-
T Consensus 4 ~~~~~~~~~~~~~~~~wk~~~~----~~q~~ap~p 34 (463)
T 3cxl_A 4 HHHHSSGRENLYFQGVWKSYLY----QLQQEAPHP 34 (463)
T ss_dssp --------------CCSCCHHH----HHHHHSCCC
T ss_pred CCCCCCCHHHHHHHHHHHHCCC----HHHHCCCCC
T ss_conf 4345542155666611110031----544238998
No 171
>2r2o_A Plexin-B1; effector domain, structural genomics, structural genomics consortium, SGC, alternative splicing, coiled coil glycoprotein, membrane; 2.00A {Homo sapiens} PDB: 2rex_A* 2jph_A
Probab=41.17 E-value=4.3 Score=20.20 Aligned_cols=17 Identities=94% Similarity=1.499 Sum_probs=13.5
Q ss_pred CCCCCCCCCEEEEEECC
Q ss_conf 11245543105764027
Q T0576 8 HHHSSGRENLYFQGHVE 24 (172)
Q Consensus 8 hhhssgrenlyfqgh~~ 24 (172)
...||||||.+|++.+|
T Consensus 5 ~~~~~~re~kLlr~~VE 21 (138)
T 2r2o_A 5 HHHSSGRENLYFQGDVE 21 (138)
T ss_dssp -----------------
T ss_pred CCCCCCHHHHHHHHCCC
T ss_conf 44567506666640420
No 172
>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, coiled coil, metal-binding, phosphoprotein; NMR {Homo sapiens}
Probab=40.69 E-value=4.9 Score=19.89 Aligned_cols=42 Identities=45% Similarity=0.618 Sum_probs=26.0
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 2112455431057640274124688999999973681688741
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVR 49 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvr 49 (172)
....||+|+|+||+|..++--.-+...+ -.--..+-|...+.
T Consensus 4 ~~~~~~~~~n~~~~g~~~~l~~it~~ev-~~Hn~~~d~Wvvi~ 45 (112)
T 2keo_A 4 HHHHSSGRENLYFQGNNEKVTLVRIADL-ENHNNDGGFWTVID 45 (112)
T ss_dssp -----------------CCCCEECHHHH-HHHHHHTCCEEEET
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHH-HHHCCCCCEEEEEC
T ss_conf 4444566667646778875774489999-97589998799999
No 173
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=39.68 E-value=4.7 Score=19.97 Aligned_cols=16 Identities=94% Similarity=1.535 Sum_probs=12.8
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....||||||+||||-
T Consensus 4 ~~~~~~~~~~~~~~~~ 19 (239)
T 3lxx_A 4 HHHHSSGRENLYFQGG 19 (239)
T ss_dssp ----------------
T ss_pred CCCCCCCCHHHHHCCC
T ss_conf 4435556212332179
No 174
>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CBIE); beta, alpha-beta-alpha sandwich, structural genomics, PSI; HET: SAH; 2.27A {Archaeoglobus fulgidus dsm 4304} SCOP: c.90.1.1
Probab=39.41 E-value=4.5 Score=20.07 Aligned_cols=18 Identities=89% Similarity=1.595 Sum_probs=14.2
Q ss_pred CCCCCCCCCCCEEEEEEC
Q ss_conf 421124554310576402
Q T0576 6 HHHHHSSGRENLYFQGHV 23 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~ 23 (172)
.....+|||+|.||.|||
T Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (221)
T 2bb3_A 6 HHHHHSSGRENLYFSGHM 23 (221)
T ss_dssp --------------CCSE
T ss_pred CCCCCCCCCCCCCCCCCE
T ss_conf 444456655566635998
No 175
>2kdb_A Homocysteine-responsive endoplasmic reticulum- resident ubiquitin-like domain member...; UBL domain, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=38.76 E-value=5 Score=19.82 Aligned_cols=18 Identities=94% Similarity=1.579 Sum_probs=14.3
Q ss_pred CCCCCCCCCCCEEEEEEC
Q ss_conf 421124554310576402
Q T0576 6 HHHHHSSGRENLYFQGHV 23 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~ 23 (172)
.....+|++|||+|||+-
T Consensus 6 ~~~~~~~~~e~l~~~g~~ 23 (99)
T 2kdb_A 6 HHHHHSSGRENLYFQGHP 23 (99)
T ss_dssp -----------------C
T ss_pred CCCCCCCCCCCCCCCCCE
T ss_conf 433236876442127955
No 176
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP- binding; HET: ANP; 2.55A {Toxoplasma gondii ME49}
Probab=38.34 E-value=4.5 Score=20.11 Aligned_cols=18 Identities=83% Similarity=1.492 Sum_probs=14.1
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....||||+|+||||.++
T Consensus 4 ~~~~ss~~~n~~~~~~i~ 21 (285)
T 3is5_A 4 HHHHSSGRENLYFQGTID 21 (285)
T ss_dssp ---------CCEESSCHH
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 677899985555358836
No 177
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens}
Probab=38.11 E-value=5.2 Score=19.72 Aligned_cols=18 Identities=83% Similarity=1.377 Sum_probs=14.0
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....||||||+||+|--+
T Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (247)
T 3lxw_A 4 HHHHSSGRENLYFQGEST 21 (247)
T ss_dssp ----------------CE
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 444567888853048997
No 178
>3isu_A RAS GTPase-activating-like protein iqgap3; structural genomics, structural genomics consortium (SGC), RGC domain, calmodulin-binding; 1.88A {Homo sapiens}
Probab=37.90 E-value=4.7 Score=20.01 Aligned_cols=18 Identities=83% Similarity=1.355 Sum_probs=14.6
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....||||+|+|++|.-.
T Consensus 4 ~~~~~~g~~~~~~~~~kK 21 (121)
T 3isu_A 4 HHHHSSGRENLYFQGGKK 21 (121)
T ss_dssp -----------CCC----
T ss_pred CCCCCCCCCCHHHHCCCC
T ss_conf 444456875244506732
No 179
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structural genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum 3D7}
Probab=37.54 E-value=5.5 Score=19.53 Aligned_cols=18 Identities=89% Similarity=1.464 Sum_probs=14.2
Q ss_pred CCCCCCCCCCCEEEEEEC
Q ss_conf 421124554310576402
Q T0576 6 HHHHHSSGRENLYFQGHV 23 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~ 23 (172)
.....||||||+||||--
T Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (272)
T 3ied_A 6 HHHHHSSGRENLYFQGSP 23 (272)
T ss_dssp --------CCCCEETTEE
T ss_pred CCCCCCCCHHHHHHCCCC
T ss_conf 444557512445414786
No 180
>2kgy_A RV0603 protein, possible exported protein; secretory protein, immune system; NMR {Mycobacterium tuberculosis}
Probab=37.40 E-value=2.1 Score=22.14 Aligned_cols=14 Identities=50% Similarity=0.800 Sum_probs=10.9
Q ss_pred CCCCCCEEEEEECC
Q ss_conf 45543105764027
Q T0576 11 SSGRENLYFQGHVE 24 (172)
Q Consensus 11 ssgrenlyfqgh~~ 24 (172)
-.-.|||||||.|.
T Consensus 14 ~~~~~~~~~~~~~~ 27 (102)
T 2kgy_A 14 IPTTENLYFQGAMA 27 (102)
T ss_dssp CTTSSSHHHHHHHH
T ss_pred CCCCCCEEEEEEEE
T ss_conf 77623126640121
No 181
>1ytv_M V1AR, vasopressin V1A receptor; GPCR, fusion protein, maltose- binding protein, sugar binding protein, hormone receptor; HET: MAL; 1.80A {Homo sapiens}
Probab=36.86 E-value=6.8 Score=18.97 Aligned_cols=22 Identities=32% Similarity=0.403 Sum_probs=13.4
Q ss_pred CCCCEEEEEECCCCHHHHHHHH
Q ss_conf 5431057640274124688999
Q T0576 13 GRENLYFQGHVEPGVTDRIGQM 34 (172)
Q Consensus 13 grenlyfqgh~~~~vtdrig~m 34 (172)
-.|||||||.----.-.++-++
T Consensus 17 ~~~~~~~~~~gsFPCC~k~k~~ 38 (84)
T 1ytv_M 17 IEENLYFQGQGSFPCCQNMKEK 38 (84)
T ss_pred HHHCEEECCCCCCHHHHHHHHH
T ss_conf 2111266257666278889876
No 182
>2f6s_A Cell filamentation protein, putative; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.50A {Helicobacter pylori 26695} SCOP: a.265.1.1
Probab=36.72 E-value=4.9 Score=19.86 Aligned_cols=59 Identities=39% Similarity=0.753 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHH-------------CCCCCEEEEEE
Q ss_conf 4211245543105764027412468899999997368168874188750212-------------17841067740
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGVAEL-------------YGGEARKVEIT 68 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsvrspg~vael-------------yggearkv~i~ 68 (172)
.....||||+|+||++.++--+.. |..-. .+|.+|. ..--.|++...| +.|+-|+++|+
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~d~~~-i~~a~-~~~~~~~--l~~~e~~t~~~L~~iH~~Lf~~~~~~aG~~R~~~v~ 77 (201)
T 2f6s_A 6 HHHHHSSGRENLYFQGHMHLDRQS-LEKAK-HLIQSGL--IDTIEVGTIKGLQEIHRFLFEGLYEFAGKIRDKNIA 77 (201)
T ss_dssp ---------------CCCHHHHHH-HHHHH-HHHHTSG--GGGSCSSSHHHHHHHHHHHHTTTBTTTTCCCSSCCE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHH-HHHHH-HHHHHCC--CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE
T ss_conf 322113565332102633165999-99999-9998387--645788889999999999977996659837884955
No 183
>3igo_A Calmodulin-domain protein kinase 1; parasite, calcium, CDPK, structural genomics, structural genomics consortium, SGC; HET: ANP SRT; 2.25A {Cryptosporidium parvum iowa II}
Probab=36.47 E-value=5.4 Score=19.59 Aligned_cols=17 Identities=88% Similarity=1.468 Sum_probs=13.7
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....||+|||+||+|..
T Consensus 4 ~~~~~~~~~~~~~~~~f 20 (486)
T 3igo_A 4 HHHHSSGRENLYFQGTF 20 (486)
T ss_dssp -------------CCCH
T ss_pred CCCCCCCCCCCCCCCCH
T ss_conf 67888998675137884
No 184
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=36.34 E-value=5.7 Score=19.44 Aligned_cols=18 Identities=83% Similarity=1.307 Sum_probs=14.2
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....||||||||+||.-.
T Consensus 4 ~~~~s~~~e~l~~~~~~~ 21 (91)
T 2pmy_A 4 HHHHSSGRENLYFQGADG 21 (91)
T ss_dssp ---------------CHH
T ss_pred CCCCCHHHHHHHHHCCCC
T ss_conf 222214578887722569
No 185
>3fkm_X Signaling protein; bromodomain, malaria, structural genomics, structural genomics consortium, SGC; 2.50A {Plasmodium falciparum 3D7}
Probab=36.08 E-value=5.1 Score=19.78 Aligned_cols=18 Identities=83% Similarity=1.413 Sum_probs=14.1
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....||||+++|+||.-+
T Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (166)
T 3fkm_X 4 HHHHSSGRENLYFQGNKQ 21 (166)
T ss_dssp -------------CTTHH
T ss_pred CCCCCCCCCCCCHHHHHH
T ss_conf 556899985522020599
No 186
>2guh_A Putative TETR-family transcriptional regulator; helix-turn-helix, TETR fold, structural genomics, PSI, protein structure initiative; HET: MSE; 1.52A {Rhodococcus SP}
Probab=35.95 E-value=5.9 Score=19.38 Aligned_cols=23 Identities=78% Similarity=1.275 Sum_probs=17.8
Q ss_pred CCCCCCCCCCCEEEEEECCCCHH
Q ss_conf 42112455431057640274124
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVT 28 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vt 28 (172)
.....+|||+|.||+|++-+.-.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~p~ 28 (214)
T 2guh_A 6 HHHHHSSGRENLYFQGHVTSDPG 28 (214)
T ss_dssp -----------------------
T ss_pred CCCCCCCHHHHHHHCCCCCCCCC
T ss_conf 44456731456654388899999
No 187
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP- binding, ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=35.83 E-value=5.2 Score=19.69 Aligned_cols=33 Identities=33% Similarity=0.471 Sum_probs=19.5
Q ss_pred CCCCCEEEEEECCC----------CHHHHHHHHHHHHHHCCEE
Q ss_conf 55431057640274----------1246889999999736816
Q T0576 12 SGRENLYFQGHVEP----------GVTDRIGQMILEMFRTGMC 44 (172)
Q Consensus 12 sgrenlyfqgh~~~----------~vtdrig~milemfr~gmc 44 (172)
.|.||+|||-||.. |-|---.-+.-.+-+.|..
T Consensus 15 ~~~~~~~~~~~M~~lfItGT~TgVGKT~Vs~~L~~aL~~~G~~ 57 (251)
T 3fgn_A 15 QGTENLYFQSHMTILVVTGTGTGVGKTVVCAALASAARQAGID 57 (251)
T ss_dssp -------CCSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCE
T ss_conf 1432103540598689986999961999999999999968994
No 188
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=35.60 E-value=6 Score=19.32 Aligned_cols=20 Identities=45% Similarity=0.767 Sum_probs=14.7
Q ss_pred CCCCCCCCCEEEEEECCCCH
Q ss_conf 11245543105764027412
Q T0576 8 HHHSSGRENLYFQGHVEPGV 27 (172)
Q Consensus 8 hhhssgrenlyfqgh~~~~v 27 (172)
.....|.|||||||.-|.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (351)
T 2wam_A 16 LYKKAGSENLYFQGARDQGA 35 (351)
T ss_dssp --------------------
T ss_pred HHHHCCCCCEEEECCCCCCC
T ss_conf 77753774204412545689
No 189
>3bkp_A Cyclophilin; malaria, isomerase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=35.58 E-value=5.4 Score=19.58 Aligned_cols=43 Identities=47% Similarity=0.674 Sum_probs=29.1
Q ss_pred CCCCCCCCCCEEEEEECCCCH---------------------HHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 211245543105764027412---------------------4688999999973681688741
Q T0576 7 HHHHSSGRENLYFQGHVEPGV---------------------TDRIGQMILEMFRTGMCLFSVR 49 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~v---------------------tdrig~milemfr~gmclfsvr 49 (172)
....||||||+||++-...+| .++.-.+..+-|-.|++.+-|-
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~V~l~Ts~G~i~ieL~~d~aP~tv~NF~~L~~~g~Y~g~~FhRvi 67 (232)
T 3bkp_A 4 HHHHSSGRENLYFQGSTRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVV 67 (232)
T ss_dssp --------CGGGCCCSCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEE
T ss_pred CCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 4555788851776137875899996771389998689894999999999863776995778998
No 190
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, calcium, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A
Probab=34.65 E-value=2.6 Score=21.63 Aligned_cols=17 Identities=88% Similarity=1.468 Sum_probs=13.3
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....|||++|+||+|..
T Consensus 4 ~~~~ss~~~n~y~~~~f 20 (287)
T 2wei_A 4 HHHHSSGRENLYFQGTF 20 (287)
T ss_dssp -----CCHHHHHHTHHH
T ss_pred CCCCCCCCCCCCCCCCH
T ss_conf 67788998665568883
No 191
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics, oxidoreductase; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A*
Probab=34.61 E-value=11 Score=17.74 Aligned_cols=71 Identities=39% Similarity=0.642 Sum_probs=48.5
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH--HCCEEEEEECCCCC-HHH---------HCCCCCEEEEEECCEEEE
Q ss_conf 211245543105764027412468899999997--36816887418875-021---------217841067740534676
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEMF--RTGMCLFSVRSPGG-VAE---------LYGGEARKVEITGTSLTI 74 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milemf--r~gmclfsvrspg~-vae---------lyggearkv~i~gtslti 74 (172)
....||||||+|+...+---=--|||..+|... +...-+-.+..|.. ... .||--..++++.+..|.|
T Consensus 4 ~~~~~~~~~~~~m~~~IgINGFGRIGR~vlR~~l~~~~i~ivaINd~~~d~~~la~LLkyDSvhG~~~~~i~~~~~~l~i 83 (354)
T 3cps_A 4 HHHHSSGRENLYFQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCI 83 (354)
T ss_dssp --------------CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEE
T ss_pred CCCCCCCCCHHHCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCEEEE
T ss_conf 43356773001021128997875899999999975899689997899999999999857247788899948995997999
Q ss_pred EEC
Q ss_conf 501
Q T0576 75 ERE 77 (172)
Q Consensus 75 ere 77 (172)
...
T Consensus 84 ~g~ 86 (354)
T 3cps_A 84 NGK 86 (354)
T ss_dssp TTE
T ss_pred CCE
T ss_conf 999
No 192
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=34.33 E-value=13 Score=17.20 Aligned_cols=34 Identities=50% Similarity=0.803 Sum_probs=25.1
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
Q ss_conf 4211245543105764027412468899999997368
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTG 42 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr~g 42 (172)
.....|+|++|+|||| ++-.-||-.-+-++-...
T Consensus 6 ~~~~~s~~~~~~~~~~---s~~~~Rl~kEl~~l~~~~ 39 (216)
T 2pwq_A 6 HHHHHSSGRENLYFQG---SKELLRLQKELKDIENEN 39 (216)
T ss_dssp -------------CCS---CHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCCHHHHHHHH---HHHHHHHHHHHHHHHHCC
T ss_conf 4454665410201333---099999999999996589
No 193
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefaciens STR. C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=34.22 E-value=6.5 Score=19.10 Aligned_cols=17 Identities=94% Similarity=1.564 Sum_probs=13.4
Q ss_pred CCCCCCCCCCCEEEEEE
Q ss_conf 42112455431057640
Q T0576 6 HHHHHSSGRENLYFQGH 22 (172)
Q Consensus 6 hhhhhssgrenlyfqgh 22 (172)
.....||||||+||++-
T Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (332)
T 2r8w_A 6 HHHHHSSGRENLYFQGM 22 (332)
T ss_dssp -----------------
T ss_pred CCCCCCCCCCCCCCCCC
T ss_conf 44434677634341567
No 194
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=33.31 E-value=6.9 Score=18.95 Aligned_cols=19 Identities=79% Similarity=1.328 Sum_probs=14.9
Q ss_pred CCCCCCCCCCEEEEEECCC
Q ss_conf 2112455431057640274
Q T0576 7 HHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~ 25 (172)
....|||++|+|+||.-|.
T Consensus 4 ~~~~~~~~~~~~~~~~kd~ 22 (195)
T 3cbq_A 4 HHHHSSGRENLYFQGQKDG 22 (195)
T ss_dssp ------------------C
T ss_pred CCCCCCCCCCCCCCCCCCC
T ss_conf 5556788866453567775
No 195
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell membrane, GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens}
Probab=32.36 E-value=7.6 Score=18.67 Aligned_cols=19 Identities=79% Similarity=1.333 Sum_probs=15.5
Q ss_pred CCCCCCCCCCEEEEEECCC
Q ss_conf 2112455431057640274
Q T0576 7 HHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~ 25 (172)
....|||++|+|+||..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~ 22 (191)
T 3dz8_A 4 HHHHSSGRENLYFQGNFDY 22 (191)
T ss_dssp -------CCEEEETTEEEE
T ss_pred CCCCCCCCCCCCCCCCCCE
T ss_conf 6666799866444677673
No 196
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=32.25 E-value=6.8 Score=18.96 Aligned_cols=20 Identities=40% Similarity=0.659 Sum_probs=12.4
Q ss_pred CCCCCCEEEEEECCCCHHHHH
Q ss_conf 455431057640274124688
Q T0576 11 SSGRENLYFQGHVEPGVTDRI 31 (172)
Q Consensus 11 ssgrenlyfqgh~~~~vtdri 31 (172)
-...|||||||- ||-.-..|
T Consensus 18 ~~~~~~~~~~~~-~~~~Ms~l 37 (107)
T 2k48_A 18 LDSTENLYFQGI-DPFTMSTL 37 (107)
T ss_dssp CCCCCCCCCCCC-CSHHHHHH
T ss_pred CCCCCCHHHCCC-CCCHHHHH
T ss_conf 675320120166-81137459
No 197
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural genomics, PSI-2; 1.80A {Vibrio cholerae o1 biovar eltor str}
Probab=31.59 E-value=9.2 Score=18.15 Aligned_cols=30 Identities=37% Similarity=0.539 Sum_probs=19.1
Q ss_pred CCCCCCEEEEEECCCCHHHHH-HHHHHHHHH
Q ss_conf 455431057640274124688-999999973
Q T0576 11 SSGRENLYFQGHVEPGVTDRI-GQMILEMFR 40 (172)
Q Consensus 11 ssgrenlyfqgh~~~~vtdri-g~milemfr 40 (172)
.-|.||||||..--++|.+-- -.-|++-|-
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~p 42 (379)
T 3bv6_A 12 DLGTENLYFQSNAMSKVNEITRESWILSTFP 42 (379)
T ss_dssp ---------------CGGGCCHHHHHHHHCS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
T ss_conf 5575335764264223545517555323688
No 198
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=30.82 E-value=12 Score=17.36 Aligned_cols=55 Identities=33% Similarity=0.473 Sum_probs=32.6
Q ss_pred CCCCEEEEEEC---------CCCHHHHHHHHHHHHHHCCEEEEEECCCC--------CHHHHCCCCCEEEEEECCE
Q ss_conf 54310576402---------74124688999999973681688741887--------5021217841067740534
Q T0576 13 GRENLYFQGHV---------EPGVTDRIGQMILEMFRTGMCLFSVRSPG--------GVAELYGGEARKVEITGTS 71 (172)
Q Consensus 13 grenlyfqgh~---------~~~vtdrig~milemfr~gmclfsvrspg--------~vaelyggearkv~i~gts 71 (172)
.-||+||+|+| .|.+.++--.-|.+.+++|.- .+-| .+|+..|.+.--.--+||+
T Consensus 11 ~~~~~~~~~~~~~~~~i~~~~p~~~~~e~~~~~~~~~~~~~----~~~G~~~~~fE~~~a~~~g~~~av~~~SGT~ 82 (391)
T 3dr4_A 11 SSENLYFQGHMSDLPRISVAAPRLDGNERDYVLECMDTTWI----SSVGRFIVEFEKAFADYCGVKHAIACNNGTT 82 (391)
T ss_dssp -----------------CCCCCCCCSSHHHHHHHHHHHTCC----SSCSHHHHHHHHHHHHHHTCSEEEEESSHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHHHHHCCCEEEEECCHHH
T ss_conf 35677653276779810566999998999999999975971----7899799999999999869695999668999
No 199
>3fiw_A Putative TETR-family transcriptional regulator; TETR-family transcriptional regulator streptomyces, structural genomics, PSI-2; 2.20A {Streptomyces coelicolor}
Probab=30.68 E-value=20 Score=16.05 Aligned_cols=43 Identities=47% Similarity=0.753 Sum_probs=27.2
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHC-CEEEEEEC
Q ss_conf 421124554310576402741246889999999736-81688741
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRT-GMCLFSVR 49 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vtdrig~milemfr~-gmclfsvr 49 (172)
.....||+|||.||||--... -++|-.--+++|.. |.--.+++
T Consensus 6 ~~~~~~~~~~~~~~q~~~~~~-Re~Il~AA~~lf~e~G~~~~T~~ 49 (211)
T 3fiw_A 6 HHHHHSSGRENLYFQGMTKMN-RETVITEALDLLDEVGLDGVSTR 49 (211)
T ss_dssp ------------------CCC-HHHHHHHHHHHHHHHCGGGCCHH
T ss_pred CCCCCCCCCCCCCHHHCCHHH-HHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 566778888884321124879-99999999999998593536599
No 200
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A
Probab=30.58 E-value=8.1 Score=18.49 Aligned_cols=19 Identities=79% Similarity=1.279 Sum_probs=15.2
Q ss_pred CCCCCCCCCCEEEEEECCC
Q ss_conf 2112455431057640274
Q T0576 7 HHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~ 25 (172)
....||||||+|+||....
T Consensus 4 ~~~~~~~~~~~~~~~~~~e 22 (345)
T 2qfz_A 4 HHHHSSGRENLYFQGSERE 22 (345)
T ss_dssp -------------------
T ss_pred CCCCCCCHHHHHHCCCHHH
T ss_conf 4345654025653112579
No 201
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=30.41 E-value=7.6 Score=18.66 Aligned_cols=18 Identities=89% Similarity=1.427 Sum_probs=13.8
Q ss_pred CCCCCCCCCCCEEEEEEC
Q ss_conf 421124554310576402
Q T0576 6 HHHHHSSGRENLYFQGHV 23 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~ 23 (172)
.....||||||++|||.-
T Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (392)
T 3led_A 6 HHHHHSSGRENLYFQGVR 23 (392)
T ss_dssp ------------CCCBCC
T ss_pred CCCCCCCCCHHHHHCCCC
T ss_conf 443335520356755767
No 202
>1kqr_A VP4; spike protein, outer capsid, sialic acid, hemagglutinin, cell attachment, neutralization antigen, lectin, galectin fold, viral protein; HET: MNA; 1.40A {Rhesus rotavirus} SCOP: b.29.1.14 PDB: 2p3k_A* 2p3i_A* 2p3j_A* 2i2s_A*
Probab=30.05 E-value=8.4 Score=18.40 Aligned_cols=50 Identities=38% Similarity=0.422 Sum_probs=24.5
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHH---CCEEEEEECCCCCHHHHCCCCCEE
Q ss_conf 455431057640274124688999999973---681688741887502121784106
Q T0576 11 SSGRENLYFQGHVEPGVTDRIGQMILEMFR---TGMCLFSVRSPGGVAELYGGEARK 64 (172)
Q Consensus 11 ssgrenlyfqgh~~~~vtdrig~milemfr---~gmclfsvrspg~vaelyggeark 64 (172)
-.|||||||||.- | |-|--=|- .-|. .=--|++--.+|-|+|.-....|.
T Consensus 5 ~~~~~~~~~~~~E-P-vLDGPYQP--tsfnpp~~YWiLl~P~~~GVV~E~Tnntd~W 57 (179)
T 1kqr_A 5 FPGRENLYFQGRE-P-VLDGPYQP--TTFNPPVDYWMLLAPTAAGVVVEGTNNTDRW 57 (179)
T ss_dssp -----------------CEEEECS--EEECCCTTEEEEECCCSSEEEEEEECSSSCE
T ss_pred CCCCCEEEEECCC-C-CCCCCCCC--CCCCCCCCEEEEECCCCCCEEEEEECCCCEE
T ss_conf 8883301100115-5-66899898--4017998648998889998899900686748
No 203
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helicase, alternative splicing, ATP-binding; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=29.96 E-value=8.4 Score=18.39 Aligned_cols=16 Identities=94% Similarity=1.535 Sum_probs=12.7
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....||||+|+||||-
T Consensus 4 ~~~~~~~~~~~~~~~~ 19 (237)
T 3bor_A 4 HHHHSSGRENLYFQGG 19 (237)
T ss_dssp ----------------
T ss_pred CCCCCCCCCCEECCCC
T ss_conf 5567777642002588
No 204
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/bleomycin resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris}
Probab=29.90 E-value=8.5 Score=18.38 Aligned_cols=20 Identities=80% Similarity=1.301 Sum_probs=15.4
Q ss_pred CCCCCCCCCCCEEEEEECCC
Q ss_conf 42112455431057640274
Q T0576 6 HHHHHSSGRENLYFQGHVEP 25 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~ 25 (172)
.....||||+|+||+|---.
T Consensus 6 ~~~~~~~~~~~~~~~gm~~~ 25 (164)
T 3m2o_A 6 HHHHHSSGRENLYFQGMRST 25 (164)
T ss_dssp ------------------CC
T ss_pred CCCCCCCCCCCCCCCCCCCC
T ss_conf 44424566667511567425
No 205
>2aua_A Hypothetical protein; dimer, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Bacillus cereus} SCOP: d.166.1.6
Probab=29.55 E-value=9.7 Score=18.00 Aligned_cols=55 Identities=20% Similarity=0.204 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHC---------CEEEEEECCCCCH---HHHC---CCCCEEEEEECCEEEEEECCEEEE
Q ss_conf 46889999999736---------8168874188750---2121---784106774053467650121677
Q T0576 28 TDRIGQMILEMFRT---------GMCLFSVRSPGGV---AELY---GGEARKVEITGTSLTIEREDWHLH 82 (172)
Q Consensus 28 tdrig~milemfr~---------gmclfsvrspg~v---aely---ggearkv~i~gtsltiere~whlh 82 (172)
++-+-.+|+|+.|. --|+|.+.+.... .++| .++...+++.-.+-...+-||.|.
T Consensus 105 ~r~~rElI~E~VR~~efP~~PSRL~ciFa~~sledA~~wr~~f~~~~~~vyqI~~iev~~n~~~gDm~LL 174 (224)
T 2aua_A 105 IRAARETIVEMVRLQEFPEYPSRLSCLYAAKSYEDALKWKALFDSYNREVLQIVKLRVIGSSFEGDGNLL 174 (224)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCCTTSCEEEBSSHHHHHHHHHHHHHTTCCCCEEEEEEEEEEEEEECGGGS
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHC
T ss_conf 0578899999999963799984121278628999999999988735887159988853642325742210
No 206
>2iai_A Putative transcriptional regulator SCO3833; structural genomics, TETR, unknown function, PSI-2, protein structure initiative; 1.65A {Streptomyces coelicolor}
Probab=29.19 E-value=4 Score=20.40 Aligned_cols=43 Identities=44% Similarity=0.688 Sum_probs=25.3
Q ss_pred CCCCCCCCCCCEEEEEECCCCHH----HHHHHHHHHHHH-CCEEEEEE
Q ss_conf 42112455431057640274124----688999999973-68168874
Q T0576 6 HHHHHSSGRENLYFQGHVEPGVT----DRIGQMILEMFR-TGMCLFSV 48 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~vt----drig~milemfr-~gmclfsv 48 (172)
.....|+||+|+||||.....-. ++|=+--+++|. .|.--+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~r~~~tr~~IL~aA~~lf~~~G~~~~s~ 53 (230)
T 2iai_A 6 HHHHHSSGRENLYFQGMTTAKRDTYTPETLLSVAVQVFIERGYDGTSM 53 (230)
T ss_dssp -------CCCBCSSTTCBCCC----CCSCHHHHHHHHHHHHCTTTCCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 445567888764446899766867999999999999999859263719
No 207
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=28.99 E-value=6.8 Score=18.98 Aligned_cols=19 Identities=84% Similarity=1.399 Sum_probs=14.0
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....|+||+|||||+--.
T Consensus 6 ~~~~~~~~~~~~~~~~m~~ 24 (344)
T 2hmc_A 6 HHHHHSSGRENLYFQGMTA 24 (344)
T ss_dssp ------------CCSTTSC
T ss_pred CCCCCCCCCCCHHHHHCCC
T ss_conf 4321236641136653745
No 208
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima MSB8} SCOP: d.58.18.6 d.58.18.6
Probab=28.59 E-value=4.9 Score=19.87 Aligned_cols=21 Identities=81% Similarity=1.379 Sum_probs=16.3
Q ss_pred CCCCCCCCCCCEEEEEECCCC
Q ss_conf 421124554310576402741
Q T0576 6 HHHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~~~ 26 (172)
.....+|+|+|+||+++|...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~ 26 (193)
T 2fgc_A 6 HHHHHSSGRENLYFQGHMTDQ 26 (193)
T ss_dssp ---------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCC
T ss_conf 443246677554322333560
No 209
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.97A {Archaeoglobus fulgidus}
Probab=27.92 E-value=10 Score=17.81 Aligned_cols=47 Identities=38% Similarity=0.593 Sum_probs=27.1
Q ss_pred CCCCCCCCCCCEEEEEECC----------CCHHHHHHH---HHHHHHHCCEEEEEECCCC
Q ss_conf 4211245543105764027----------412468899---9999973681688741887
Q T0576 6 HHHHHSSGRENLYFQGHVE----------PGVTDRIGQ---MILEMFRTGMCLFSVRSPG 52 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~----------~~vtdrig~---milemfr~gmclfsvrspg 52 (172)
.....|||+||+||++.+- |....+.=. .+...+...+.++.+..++
T Consensus 6 ~~~~~~~g~~~~~~~~~~y~~IlVavD~~S~~s~~al~~A~~lA~~~~a~l~lvhv~~~~ 65 (155)
T 3dlo_A 6 HHHHHSSGRENLYFQGMIYMPIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGG 65 (155)
T ss_dssp ----------------CCCCCEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCS
T ss_pred CCCCCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
T ss_conf 555345899776873476275899997959899999999999999749979999974488
No 210
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=27.87 E-value=22 Score=15.83 Aligned_cols=47 Identities=36% Similarity=0.523 Sum_probs=29.5
Q ss_pred CCCCCCCCCCEEEEE----------------ECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCH
Q ss_conf 211245543105764----------------027412468899999997368168874188750
Q T0576 7 HHHHSSGRENLYFQG----------------HVEPGVTDRIGQMILEMFRTGMCLFSVRSPGGV 54 (172)
Q Consensus 7 hhhhssgrenlyfqg----------------h~~~~vtdrig~milemfr~gmclfsvrspg~v 54 (172)
....||||||+||+. ..-|...++.-.++..-|-.|.+.+.|- |+.+
T Consensus 4 ~~~~~~~~~n~~~~~V~i~T~~G~i~IeL~~d~aP~tv~nF~~L~~~g~Y~~~~f~rv~-~~~~ 66 (185)
T 2poe_A 4 HHHHSSGRENLYFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNI-KGFI 66 (185)
T ss_dssp -----------CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEEC-TTSE
T ss_pred CCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECC-CCCE
T ss_conf 45446788763476699996988799999089996999999999738886992865406-7868
No 211
>3kuq_A RHO GTPase-activating protein 7; structural genomics consortium, GTPase activation, SGC, alternative splicing, cytoplasm, phosphoprotein; 2.30A {Homo sapiens}
Probab=27.36 E-value=7.7 Score=18.63 Aligned_cols=18 Identities=89% Similarity=1.377 Sum_probs=14.3
Q ss_pred CCCCCCCCCCEEEEEECC
Q ss_conf 211245543105764027
Q T0576 7 HHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~ 24 (172)
....|||||++||+|-+=
T Consensus 4 ~~~~~~~~~~~~~~~~vF 21 (228)
T 3kuq_A 4 HHHHSSGRENLYFQGSVF 21 (228)
T ss_dssp ----------CBCTTSST
T ss_pred CCCCCCCCCCCCCCCCEE
T ss_conf 334565331027788978
No 212
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens str}
Probab=26.99 E-value=21 Score=15.86 Aligned_cols=34 Identities=47% Similarity=0.833 Sum_probs=23.8
Q ss_pred CCCCCCCCEEEEEE--CCCCHHHHHHHHHHHHH-HCC
Q ss_conf 12455431057640--27412468899999997-368
Q T0576 9 HHSSGRENLYFQGH--VEPGVTDRIGQMILEMF-RTG 42 (172)
Q Consensus 9 hhssgrenlyfqgh--~~~~vtdrig~milemf-r~g 42 (172)
..+|||+|+||.+- +=.|-|--||.-+...+ +.|
T Consensus 2 ~~~~~~~~~~~~~MkVLVTGatGfiGs~lv~~L~~~g 38 (342)
T 2hrz_A 2 HHSSGRENLYFQGMHIAIIGAAGMVGRKLTQRLVKDG 38 (342)
T ss_dssp CCCCSCCCSCCSCEEEEEETTTSHHHHHHHHHHHHHC
T ss_pred CCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 9988872313269989998998799999999999779
No 213
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, signal, transferase, phosphorylation, transmembrane, tyrosine- protein kinase; HET: NAG MAN; 2.65A {Homo sapiens}
Probab=26.91 E-value=10 Score=17.80 Aligned_cols=15 Identities=47% Similarity=0.864 Sum_probs=11.4
Q ss_pred CCCCCEEEEEECCCC
Q ss_conf 554310576402741
Q T0576 12 SGRENLYFQGHVEPG 26 (172)
Q Consensus 12 sgrenlyfqgh~~~~ 26 (172)
.-.|||||||-++..
T Consensus 15 ~~~~~l~~qg~~~aa 29 (182)
T 3czu_B 15 PTTENLYFQGAMDAA 29 (182)
T ss_dssp --------------C
T ss_pred CHHHHHHHHHHHHHC
T ss_conf 425765544312111
No 214
>2kr1_A Ubiquitin protein ligase E3A; UBL conjugation pathway, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=26.45 E-value=22 Score=15.74 Aligned_cols=34 Identities=47% Similarity=0.762 Sum_probs=21.4
Q ss_pred CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
Q ss_conf 11245543105764027412468899999997368
Q T0576 8 HHHSSGRENLYFQGHVEPGVTDRIGQMILEMFRTG 42 (172)
Q Consensus 8 hhhssgrenlyfqgh~~~~vtdrig~milemfr~g 42 (172)
...|||+||+|||+--...+.--|...... +..|
T Consensus 5 ~~~~~~~~~~~~~~mkR~~~k~LI~rY~~Q-Lt~G 38 (82)
T 2kr1_A 5 HHHSSGRENLYFQGMKRAAAKHLIERYYHQ-LTEG 38 (82)
T ss_dssp --------------CCCHHHHHHHHHHHHH-HHTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHC
T ss_conf 445567656778998899999999999999-9846
No 215
>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C
Probab=26.44 E-value=7.3 Score=18.79 Aligned_cols=17 Identities=88% Similarity=1.429 Sum_probs=13.3
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....||||||+||+|--
T Consensus 4 ~~~~~~~~~~~~~~~s~ 20 (392)
T 2oni_A 4 HHHHSSGRENLYFQGSR 20 (392)
T ss_dssp ----------CCSTTHH
T ss_pred CCCCCCCHHHEEEECCC
T ss_conf 33356661104641158
No 216
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=25.99 E-value=9.4 Score=18.11 Aligned_cols=20 Identities=75% Similarity=1.303 Sum_probs=15.9
Q ss_pred CCCCCCCCCCEEEEEECCCC
Q ss_conf 21124554310576402741
Q T0576 7 HHHHSSGRENLYFQGHVEPG 26 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~ 26 (172)
....||||+|+||||-+...
T Consensus 4 ~~~~~~~~~~~y~~~~~~~~ 23 (494)
T 3lij_A 4 HHHHSSGRENLYFQGDLQAT 23 (494)
T ss_dssp -----------CCGGGCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCC
T ss_conf 55578898765666886889
No 217
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens}
Probab=25.96 E-value=8.1 Score=18.50 Aligned_cols=32 Identities=50% Similarity=0.808 Sum_probs=22.9
Q ss_pred CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf 21124554310576402741246889999999
Q T0576 7 HHHHSSGRENLYFQGHVEPGVTDRIGQMILEM 38 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~vtdrig~milem 38 (172)
....|+|++|++|||---+.|.+-....=|+.
T Consensus 4 ~~~~s~~~~~~~~~~~p~~tV~eWL~~igL~~ 35 (86)
T 3kka_C 4 HHHHSSGRENLYFQGVPFRTVSEWLESIKMQQ 35 (86)
T ss_dssp -------------------CHHHHHHHTTCGG
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHH
T ss_conf 44566776666536896507999999886299
No 218
>3hko_A Calcium/calmodulin-dependent protein kinase with A kinase domain and 2 calmodulin-like...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=25.86 E-value=9.4 Score=18.11 Aligned_cols=17 Identities=88% Similarity=1.425 Sum_probs=13.2
Q ss_pred CCCCCCCCCCEEEEEEC
Q ss_conf 21124554310576402
Q T0576 7 HHHHSSGRENLYFQGHV 23 (172)
Q Consensus 7 hhhhssgrenlyfqgh~ 23 (172)
....+|||+|||||..-
T Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (345)
T 3hko_A 4 HHHHSSGRENLYFQGGS 20 (345)
T ss_dssp ----------CCCCCBC
T ss_pred CCCCCCCCCCEEECCCC
T ss_conf 67789998641425898
No 219
>3f7x_A Putative polyketide cyclase; NP_743055.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=25.17 E-value=11 Score=17.56 Aligned_cols=14 Identities=50% Similarity=0.785 Sum_probs=10.0
Q ss_pred CCCCCCEEEEEECC
Q ss_conf 45543105764027
Q T0576 11 SSGRENLYFQGHVE 24 (172)
Q Consensus 11 ssgrenlyfqgh~~ 24 (172)
..-.||||||+--.
T Consensus 9 ~~~~~~~~~q~Mt~ 22 (151)
T 3f7x_A 9 HHHHENLYFQGMTA 22 (151)
T ss_dssp ----------CCCH
T ss_pred CCCHHHCCCCCCCH
T ss_conf 22310010058999
No 220
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC structure funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=24.39 E-value=11 Score=17.74 Aligned_cols=59 Identities=25% Similarity=0.319 Sum_probs=28.3
Q ss_pred CCCCCEEEEEECCCCHHH----HH--HHHHHHHHHCC---E--EEEEECCCCCHHHHCCCCCEEEEEECC
Q ss_conf 554310576402741246----88--99999997368---1--688741887502121784106774053
Q T0576 12 SGRENLYFQGHVEPGVTD----RI--GQMILEMFRTG---M--CLFSVRSPGGVAELYGGEARKVEITGT 70 (172)
Q Consensus 12 sgrenlyfqgh~~~~vtd----ri--g~milemfr~g---m--clfsvrspg~vaelyggearkv~i~gt 70 (172)
-..+||||||.|.-++-- .+ =+-+|+.++.. + |+=-+-.+..+.+|-.-.+..+-|.|.
T Consensus 15 ~~~~~~~~~~~MKI~iiSDiHgn~~ale~vl~~~~~~~~D~vi~lGDiv~~~~~~~l~~~~~~~~~V~GN 84 (190)
T 1s3l_A 15 PTTENLYFQGHMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFVIKEFENLNANIIATYGN 84 (190)
T ss_dssp -----------CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCSTHHHHHGGGCSSEEEEECCT
T ss_pred CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECC
T ss_conf 8753442368758999980899969999999999755999999878838989999987347608997276
No 221
>2klc_A Ubiquilin-1; ubiquitin-like, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Homo sapiens}
Probab=23.90 E-value=13 Score=17.29 Aligned_cols=19 Identities=89% Similarity=1.517 Sum_probs=14.7
Q ss_pred CCCCCCCCCCCEEEEEECC
Q ss_conf 4211245543105764027
Q T0576 6 HHHHHSSGRENLYFQGHVE 24 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~~ 24 (172)
.....+++|||+||||+-.
T Consensus 6 ~~~~~~~~~~~~~~~g~p~ 24 (101)
T 2klc_A 6 HHHHHSSGRENLYFQGHPK 24 (101)
T ss_dssp -----------------CC
T ss_pred CCCCCCCCCCCHHCCCCCC
T ss_conf 4444467873300059995
No 222
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=23.84 E-value=14 Score=16.98 Aligned_cols=25 Identities=64% Similarity=1.040 Sum_probs=17.5
Q ss_pred CCCCCCCCCEEEEEECCC--CHHHHHH
Q ss_conf 112455431057640274--1246889
Q T0576 8 HHHSSGRENLYFQGHVEP--GVTDRIG 32 (172)
Q Consensus 8 hhhssgrenlyfqgh~~~--~vtdrig 32 (172)
...|||++++||+|-.-| .|.+-+.
T Consensus 5 ~~~~sg~~~~~~~~d~~p~~tV~eWL~ 31 (82)
T 3hil_A 5 HHHSSGRENLYFQGDGIPYRTVSEWLE 31 (82)
T ss_dssp ---------------CCCCSSHHHHHH
T ss_pred CCCCCCHHHHHCCCCCCCHHHHHHHHH
T ss_conf 456763442103489993407999999
No 223
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=22.85 E-value=14 Score=17.08 Aligned_cols=16 Identities=94% Similarity=1.522 Sum_probs=13.0
Q ss_pred CCCCCCCCCCEEEEEE
Q ss_conf 2112455431057640
Q T0576 7 HHHHSSGRENLYFQGH 22 (172)
Q Consensus 7 hhhhssgrenlyfqgh 22 (172)
....||||||+++||-
T Consensus 4 ~~~~~~~~~~~~~~~m 19 (161)
T 3i3g_A 4 HHHHSSGRENLYFQGV 19 (161)
T ss_dssp ---------------C
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 5567788756641798
No 224
>1x7f_A Outer surface protein; structural genomics, unknown function, protein structure initiative, MCSG, PSI; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=22.67 E-value=37 Score=14.37 Aligned_cols=64 Identities=20% Similarity=0.240 Sum_probs=40.4
Q ss_pred CCCCCCEEEEEECCCC-----------HHHHHHHHHHHHHHCCEE-EE-EECCCCCHHHHCC-------------CCCEE
Q ss_conf 4554310576402741-----------246889999999736816-88-7418875021217-------------84106
Q T0576 11 SSGRENLYFQGHVEPG-----------VTDRIGQMILEMFRTGMC-LF-SVRSPGGVAELYG-------------GEARK 64 (172)
Q Consensus 11 ssgrenlyfqgh~~~~-----------vtdrig~milemfr~gmc-lf-svrspg~vaelyg-------------geark 64 (172)
.-|.||||||+.+.-+ .++..-..|..|-..|.. +| |.-+|..-.+.|- |----
T Consensus 12 ~~~~~~~~~~~n~m~r~LGiSvY~~~~~~e~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi 91 (385)
T 1x7f_A 12 DLGTENLYFQSNAMERKLGISLYPEHSTKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVI 91 (385)
T ss_dssp -------------CCCEEEEEECGGGSCHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 65722342330122442079956899877999999999998799889704764788879999999999999998799899
Q ss_pred EEEECCEEEE
Q ss_conf 7740534676
Q T0576 65 VEITGTSLTI 74 (172)
Q Consensus 65 v~i~gtslti 74 (172)
+||+..+|..
T Consensus 92 vDIsp~~l~~ 101 (385)
T 1x7f_A 92 LDVAPAVFDQ 101 (385)
T ss_dssp EEECTTCC--
T ss_pred EECCHHHHHH
T ss_conf 9878655413
No 225
>3ess_A Cholix toxin; ADP-ribosyl transferase, domain III (C-terminal catalytic domain), alpha-beta complex, transferase, transferase,toxin; HET: 18N; 1.19A {Vibrio cholerae} PDB: 2q6m_A*
Probab=22.64 E-value=12 Score=17.43 Aligned_cols=37 Identities=35% Similarity=0.572 Sum_probs=20.2
Q ss_pred CCCCCCEEEEEE-CC----CCHH----HHHHHHHHHHHHCCEEEEE
Q ss_conf 455431057640-27----4124----6889999999736816887
Q T0576 11 SSGRENLYFQGH-VE----PGVT----DRIGQMILEMFRTGMCLFS 47 (172)
Q Consensus 11 ssgrenlyfqgh-~~----~~vt----drig~milemfr~gmclfs 47 (172)
.|.-|||||||. |. .|++ .|+-+.--.+-|.|.....
T Consensus 10 hssgenlyfqgshmavitp~G~~NWT~~~L~~~H~~L~~~GYVFVG 55 (230)
T 3ess_A 10 HSSGENLYFQGSHMAVITPQGVTNWTYQELEATHQALTREGYVFVG 55 (230)
T ss_dssp -------------CCEEETTEEESCCHHHHHHHHHHHHHTTEEEEE
T ss_pred CCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 5677613662340688646764401099999999988667549996
No 226
>2k3m_A RV1761C; protein, integral membrane protein; HET: MTN; NMR {Mycobacterium tuberculosis}
Probab=22.10 E-value=14 Score=16.93 Aligned_cols=24 Identities=33% Similarity=0.549 Sum_probs=15.3
Q ss_pred CCCCCCEEEEEECCC-----CHHHHHHHH
Q ss_conf 455431057640274-----124688999
Q T0576 11 SSGRENLYFQGHVEP-----GVTDRIGQM 34 (172)
Q Consensus 11 ssgrenlyfqgh~~~-----~vtdrig~m 34 (172)
.-|.||||||...-+ .|.+.+|.-
T Consensus 12 dlgtenlyfqsnamt~fd~ervs~avgaa 40 (151)
T 2k3m_A 12 DLGTENLYFQSNAMSDFDTERVSRAVAAA 40 (151)
T ss_dssp -------------CCSCCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 55753036630545454499999998887
No 227
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus}
Probab=21.71 E-value=20 Score=16.04 Aligned_cols=41 Identities=22% Similarity=0.503 Sum_probs=24.4
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEE-CCCCCHHHHC
Q ss_conf 45543105764027412468899999997368168874-1887502121
Q T0576 11 SSGRENLYFQGHVEPGVTDRIGQMILEMFRTGMCLFSV-RSPGGVAELY 58 (172)
Q Consensus 11 ssgrenlyfqgh~~~~vtdrig~milemfr~gmclfsv-rspg~vaely 58 (172)
.-|.||||||...-+..+.+ .||...||--. +|...-.|+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k-------fy~drv~lNVLAkd~~NAkei~ 53 (275)
T 3m6y_A 12 DLGTENLYFQSNAMTNIQKR-------FYKGRVALNVLANNIENAKDIF 53 (275)
T ss_dssp ------------CCCTGGGG-------SBTTTBCEEEECSSHHHHHHHH
T ss_pred CCCCCCEEEHHHHHHHHHHH-------HHCCCEEEEEECCCHHHHHHHH
T ss_conf 65753012200377764088-------7517067653138754199999
No 228
>2aj4_A Galactokinase; galactosemia, transcription, transferase; HET: GLA ANP; 2.40A {Saccharomyces cerevisiae}
Probab=21.47 E-value=15 Score=16.80 Aligned_cols=46 Identities=39% Similarity=0.644 Sum_probs=27.8
Q ss_pred CCCCEEEEEECCCCH--------------------HHHHHHHHHHHHHC---CEEEEEECCCCCHHHHCCC
Q ss_conf 543105764027412--------------------46889999999736---8168874188750212178
Q T0576 13 GRENLYFQGHVEPGV--------------------TDRIGQMILEMFRT---GMCLFSVRSPGGVAELYGG 60 (172)
Q Consensus 13 grenlyfqgh~~~~v--------------------tdrig~milemfr~---gmclfsvrspg~vaelygg 60 (172)
.-||+|||||+.... +.|+-. +++.|+. --.-|-+|+||-| +|.|.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~r~~~-~~~~F~~~fg~~P~~~~~APGRV-nLiGE 79 (548)
T 2aj4_A 11 SSENLYFQGHMTKSHSEEVIVPEFNSSAKELPRPLAEKCPS-IIKKFISAYDAKPDFVARSPGRV-NLIGE 79 (548)
T ss_dssp ------------------CBCCEECSCC-CCCHHHHHHHHH-HHHHHHHHHSSCCSEEEEEEEEE-EEECC
T ss_pred CHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHHHCCCCCEEEECCCCE-EEECC
T ss_conf 21555533520036674445443478765588567999999-99999998689998999888117-86038
No 229
>2k7i_A UPF0339 protein ATU0232; protein of unknown function, swapped dimer. PSI2, structural genomics, unknown function; NMR {Agrobacterium tumefaciens str} SCOP: d.348.1.1
Probab=21.27 E-value=15 Score=16.76 Aligned_cols=37 Identities=51% Similarity=0.905 Sum_probs=21.7
Q ss_pred CCCCCCCCCCEEEEEECCCCH-HHHHHHHHHHHHHCCEEEEEECCCCC
Q ss_conf 211245543105764027412-46889999999736816887418875
Q T0576 7 HHHHSSGRENLYFQGHVEPGV-TDRIGQMILEMFRTGMCLFSVRSPGG 53 (172)
Q Consensus 7 hhhhssgrenlyfqgh~~~~v-tdrig~milemfr~gmclfsvrspg~ 53 (172)
....+++|+|+|+||...-.+ .| ..|-+-|..+...|
T Consensus 7 ~~~~~~~~~~~~~~~m~kFEl~~d----------~~G~~rfrLka~NG 44 (83)
T 2k7i_A 7 HHHHSSGRENLYFQGMYKFEIYQD----------KAGEYRFRFKASNG 44 (83)
T ss_dssp ---------------CCEEEEEEC----------TTSCEEEEECCTTS
T ss_pred CCCCCCCCHHHHHCCCEEEEEEEC----------CCCCEEEEEEECCC
T ss_conf 331012311034353510899988----------89979999997999
No 230
>2wzp_P Lactococcal phage P2 ORF15; baseplate, viral protein; 2.60A {Lactococcus phage P2} PDB: 2x53_S
Probab=21.22 E-value=15 Score=16.78 Aligned_cols=10 Identities=80% Similarity=1.365 Sum_probs=4.8
Q ss_pred CCCCCEEEEE
Q ss_conf 5543105764
Q T0576 12 SGRENLYFQG 21 (172)
Q Consensus 12 sgrenlyfqg 21 (172)
.|-|||||||
T Consensus 20 aglenlyfqg 29 (326)
T 2wzp_P 20 AGLENLYFQG 29 (326)
T ss_dssp ---------C
T ss_pred CCCHHHHHHH
T ss_conf 0403442221
No 231
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=21.00 E-value=16 Score=16.64 Aligned_cols=37 Identities=30% Similarity=0.470 Sum_probs=21.4
Q ss_pred CCCCEEEEEECCCCH------HHHHHHH-HHHHHHCCEEEEEEC
Q ss_conf 543105764027412------4688999-999973681688741
Q T0576 13 GRENLYFQGHVEPGV------TDRIGQM-ILEMFRTGMCLFSVR 49 (172)
Q Consensus 13 grenlyfqgh~~~~v------tdrig~m-ilemfr~gmclfsvr 49 (172)
.-+||||||||-..- ....|.| +++--+-|.-..-+-
T Consensus 11 ~~~~~~~~~~~~~~krigIlG~GQLgrml~~aA~~LGi~v~vld 54 (403)
T 3k5i_A 11 SSENLYFQGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp ----------CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 33320141434789889998798999999999997899899994
No 232
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 2.10A {Rhodococcus SP}
Probab=20.98 E-value=16 Score=16.70 Aligned_cols=18 Identities=89% Similarity=1.416 Sum_probs=14.3
Q ss_pred CCCCCCCCCCCEEEEEEC
Q ss_conf 421124554310576402
Q T0576 6 HHHHHSSGRENLYFQGHV 23 (172)
Q Consensus 6 hhhhhssgrenlyfqgh~ 23 (172)
.....|+|||++|||++-
T Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (414)
T 2or0_A 6 HHHHHSSGRENLYFQGMG 23 (414)
T ss_dssp -----------------C
T ss_pred CCCCCCCCCCHHHHHHHH
T ss_conf 444467543103365799
No 233
>2ekg_A Proline dehydrogenase/delta-1-pyrroline-5- carboxylate dehydrogenase; flavoenzyme, prodh, beta-alpha- barrel, suicide inhibitor; HET: LYX FAD; 1.90A {Thermus thermophilus} PDB: 2g37_A*
Probab=20.67 E-value=18 Score=16.27 Aligned_cols=20 Identities=45% Similarity=0.740 Sum_probs=14.9
Q ss_pred CCCCCEEEEEECCCCHHHHH
Q ss_conf 55431057640274124688
Q T0576 12 SGRENLYFQGHVEPGVTDRI 31 (172)
Q Consensus 12 sgrenlyfqgh~~~~vtdri 31 (172)
...+||+||||++....-|-
T Consensus 10 ~~~~~~~~~~~~~~~~~~r~ 29 (327)
T 2ekg_A 10 HASENLYFQGHMNLDLAYRS 29 (327)
T ss_dssp ---------------CHHHH
T ss_pred HCCCCCCCCEECCCCHHHHH
T ss_conf 10246542123360287899
No 234
>3f09_A Holo-[acyl-carrier-protein] synthase; structural genomics, infectious deseases, cytoplasm, fatty acid biosynthesis, lipid synthesis; 1.82A {Staphylococcus aureus subsp}
Probab=20.00 E-value=15 Score=16.77 Aligned_cols=26 Identities=38% Similarity=0.519 Sum_probs=16.7
Q ss_pred CCCCCCCCEEEEEEC-------CCCHHHHHHHH
Q ss_conf 124554310576402-------74124688999
Q T0576 9 HHSSGRENLYFQGHV-------EPGVTDRIGQM 34 (172)
Q Consensus 9 hhssgrenlyfqgh~-------~~~vtdrig~m 34 (172)
...-|+|||||||+. |---.+||..+
T Consensus 10 ~~~~~~~~~~~~~~~MI~GIGiDIv~i~Ri~~l 42 (143)
T 3f09_A 10 GVDLGTENLYFQSNAMIHGIGVDLIEIDRIQAL 42 (143)
T ss_dssp --CTTCCCHHHHCCCSEEEEEEEEEEHHHHHHH
T ss_pred HHHCCCCCCEECCCCCEEEEEEEEEEHHHHHHH
T ss_conf 110132000135888789995771056999999
Done!