Query T0582 YP_957874.1, Marinobacter aquaeolei VT8, 222 residues Match_columns 222 No_of_seqs 207 out of 460 Neff 6.3 Searched_HMMs 22458 Date Sun Jun 13 15:22:58 2010 Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0582.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0582.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 2qdr_A Uncharacterized protein 100.0 1.4E-45 0 284.7 21.8 185 29-215 80-290 (303) 2 3bal_A Acetylacetone-cleaving 99.9 5.2E-24 2.3E-28 158.4 11.1 121 3-124 4-139 (153) 3 2o1q_A Putative acetyl/propion 99.9 5E-22 2.2E-26 146.7 8.6 106 10-116 9-129 (145) 4 2qdr_A Uncharacterized protein 99.8 1.5E-20 6.6E-25 138.1 11.0 112 10-123 184-300 (303) 5 3cjx_A Protein of unknown func 99.8 1.9E-20 8.5E-25 137.5 9.2 112 8-121 8-132 (165) 6 2q1z_B Anti-sigma factor CHRR, 99.8 6.1E-20 2.7E-24 134.5 11.7 90 14-107 101-192 (195) 7 3ebr_A Uncharacterized RMLC-li 99.8 1.7E-19 7.5E-24 131.9 8.4 92 10-102 9-106 (159) 8 2q1z_B Anti-sigma factor CHRR, 99.8 6.7E-19 3E-23 128.4 10.8 86 126-211 106-193 (195) 9 1sef_A Conserved hypothetical 99.8 3.2E-16 1.4E-20 112.7 19.5 199 11-211 30-257 (274) 10 3h7j_A Bacilysin biosynthesis 99.7 1.3E-16 5.9E-21 115.0 12.6 204 1-214 1-222 (243) 11 1sfn_A Conserved hypothetical 99.7 3.6E-15 1.6E-19 106.6 19.1 198 10-209 15-235 (246) 12 1rc6_A Hypothetical protein YL 99.7 2.9E-15 1.3E-19 107.1 17.4 199 11-211 27-254 (261) 13 3cjx_A Protein of unknown func 99.6 4.5E-15 2E-19 106.0 10.5 104 115-218 7-124 (165) 14 3bal_A Acetylacetone-cleaving 99.6 4.1E-15 1.8E-19 106.3 9.6 101 119-219 12-128 (153) 15 2o1q_A Putative acetyl/propion 99.6 2.5E-15 1.1E-19 107.5 8.2 100 119-218 10-125 (145) 16 1sq4_A GLXB, glyoxylate-induce 99.6 1E-13 4.5E-18 98.1 15.7 169 43-211 69-265 (278) 17 1y3t_A Hypothetical protein YX 99.5 2E-12 8.8E-17 90.6 18.0 199 10-211 15-290 (337) 18 3ebr_A Uncharacterized RMLC-li 99.5 1.6E-13 7.1E-18 97.0 9.1 100 118-217 9-121 (159) 19 2d40_A Z3393, putative gentisa 99.4 3.2E-11 1.4E-15 83.5 15.4 167 43-211 101-338 (354) 20 2vqa_A SLL1358 protein, MNCA; 99.4 6.5E-11 2.9E-15 81.7 15.8 171 38-208 48-309 (361) 21 1juh_A Quercetin 2,3-dioxygena 99.3 2.4E-10 1.1E-14 78.4 17.3 202 8-211 14-324 (350) 22 1j58_A YVRK protein; cupin, de 99.3 9.9E-11 4.4E-15 80.6 15.1 170 40-209 77-333 (385) 23 2phd_A Gentisate 1,2-dioxygena 99.2 1.2E-09 5.3E-14 74.3 15.7 186 25-211 78-349 (368) 24 2pfw_A Cupin 2, conserved barr 99.2 7.5E-11 3.3E-15 81.3 9.3 93 10-106 6-102 (116) 25 2pfw_A Cupin 2, conserved barr 99.0 1.1E-09 5E-14 74.4 9.8 89 124-212 13-106 (116) 26 2qnk_A 3-hydroxyanthranilate 3 99.0 6.6E-09 3E-13 69.9 13.7 180 23-211 17-276 (286) 27 3kgz_A Cupin 2 conserved barre 98.8 1E-08 4.5E-13 68.9 8.0 83 23-106 26-114 (156) 28 3ht1_A REMF protein; cupin fol 98.8 1.6E-08 7.2E-13 67.7 8.9 98 13-110 6-115 (145) 29 3bu7_A Gentisate 1,2-dioxygena 98.8 1E-06 4.6E-11 57.1 17.5 169 43-211 124-367 (394) 30 2q30_A Uncharacterized protein 98.8 6E-08 2.7E-12 64.3 10.5 83 129-212 17-108 (110) 31 3ibm_A Cupin 2, conserved barr 98.8 8.4E-08 3.7E-12 63.5 11.1 101 9-109 10-129 (167) 32 1vj2_A Novel manganese-contain 98.8 1.2E-08 5.3E-13 68.4 6.7 96 10-105 13-117 (126) 33 2ozj_A Cupin 2, conserved barr 98.8 5.1E-08 2.3E-12 64.8 9.7 61 45-105 41-105 (114) 34 1tq5_A Protein YHHW; bicupin, 98.7 9.5E-07 4.2E-11 57.3 14.8 168 43-212 42-228 (242) 35 3fjs_A Uncharacterized protein 98.7 5.7E-08 2.5E-12 64.5 7.6 76 132-208 23-103 (114) 36 1lr5_A Auxin binding protein 1 98.7 2.4E-07 1.1E-11 60.8 10.5 91 8-98 5-110 (163) 37 1yhf_A Hypothetical protein SP 98.6 2E-07 8.8E-12 61.3 9.5 64 45-108 43-110 (115) 38 1yhf_A Hypothetical protein SP 98.6 1.4E-07 6.1E-12 62.2 7.8 77 132-209 27-108 (115) 39 2ozj_A Cupin 2, conserved barr 98.6 2.9E-07 1.3E-11 60.4 9.3 88 121-209 14-106 (114) 40 1lr5_A Auxin binding protein 1 98.6 3.6E-07 1.6E-11 59.7 9.3 85 127-211 18-123 (163) 41 2vec_A YHAK, pirin-like protei 98.5 1.6E-06 7.2E-11 55.9 12.3 161 47-210 69-252 (256) 42 2b8m_A Hypothetical protein MJ 98.5 9.4E-07 4.2E-11 57.3 10.5 53 45-97 30-87 (117) 43 2cav_A Protein (canavalin); vi 98.5 5.3E-06 2.4E-10 52.9 14.3 170 41-211 85-369 (445) 44 3kgz_A Cupin 2 conserved barre 98.5 3.3E-07 1.5E-11 60.0 8.0 77 131-207 28-112 (156) 45 1v70_A Probable antibiotics sy 98.5 4.6E-07 2.1E-11 59.1 8.6 80 132-211 15-101 (105) 46 3ibm_A Cupin 2, conserved barr 98.5 1.3E-06 5.8E-11 56.5 10.4 79 132-210 37-127 (167) 47 3jzv_A Uncharacterized protein 98.5 7.3E-07 3.3E-11 58.0 8.5 76 24-100 36-115 (166) 48 2q30_A Uncharacterized protein 98.4 5.6E-07 2.5E-11 58.7 7.8 82 24-108 18-106 (110) 49 2f4p_A Hypothetical protein TM 98.4 2.1E-06 9.6E-11 55.2 10.3 72 26-97 31-108 (147) 50 3h8u_A Uncharacterized conserv 98.4 1.2E-06 5.6E-11 56.6 9.0 61 46-106 43-111 (125) 51 3fjs_A Uncharacterized protein 98.4 3.2E-07 1.4E-11 60.1 5.8 81 26-109 23-107 (114) 52 1vj2_A Novel manganese-contain 98.4 4.8E-07 2.1E-11 59.1 6.5 77 132-208 32-117 (126) 53 1o4t_A Putative oxalate decarb 98.4 1.2E-06 5.5E-11 56.6 8.0 53 148-200 60-118 (133) 54 3h8u_A Uncharacterized conserv 98.4 5.4E-06 2.4E-10 52.9 11.1 76 134-209 28-111 (125) 55 3h7j_A Bacilysin biosynthesis 98.4 1.5E-06 6.5E-11 56.2 8.1 63 45-107 148-217 (243) 56 3jzv_A Uncharacterized protein 98.3 2.5E-06 1.1E-10 54.8 8.9 77 132-208 38-121 (166) 57 3i7d_A Sugar phosphate isomera 98.3 3.5E-06 1.5E-10 54.0 9.4 91 24-115 25-125 (163) 58 1sfn_A Conserved hypothetical 98.3 1.4E-05 6.1E-10 50.5 12.4 93 12-104 134-234 (246) 59 1sef_A Conserved hypothetical 98.3 2.9E-06 1.3E-10 54.4 8.9 57 42-98 182-243 (274) 60 2f4p_A Hypothetical protein TM 98.3 6.4E-06 2.9E-10 52.4 10.6 77 133-209 32-118 (147) 61 3lwc_A Uncharacterized protein 98.3 1.4E-06 6.5E-11 56.2 6.6 56 45-101 43-102 (119) 62 1y3t_A Hypothetical protein YX 98.3 5.1E-06 2.2E-10 53.1 9.0 55 44-98 220-279 (337) 63 1rc6_A Hypothetical protein YL 98.2 3.7E-06 1.7E-10 53.8 7.6 67 144-210 58-132 (261) 64 2b8m_A Hypothetical protein MJ 98.2 5.5E-06 2.4E-10 52.8 8.4 90 132-221 14-111 (117) 65 1v70_A Probable antibiotics sy 98.2 4.6E-06 2E-10 53.3 7.9 78 26-106 15-99 (105) 66 3d82_A Cupin 2, conserved barr 98.2 1.7E-06 7.8E-11 55.8 5.7 60 45-106 34-98 (102) 67 2oa2_A BH2720 protein; 1017534 98.2 1.5E-05 6.5E-10 50.4 10.1 53 45-97 46-109 (148) 68 3ht1_A REMF protein; cupin fol 98.2 2.2E-06 9.6E-11 55.2 5.7 67 144-210 38-112 (145) 69 3cew_A Uncharacterized cupin p 98.1 3.1E-06 1.4E-10 54.3 5.9 70 30-99 14-89 (125) 70 3d82_A Cupin 2, conserved barr 98.1 5.9E-06 2.6E-10 52.7 7.3 72 137-211 23-100 (102) 71 3lwc_A Uncharacterized protein 98.1 1.9E-05 8.3E-10 49.7 9.6 67 143-210 38-109 (119) 72 1o4t_A Putative oxalate decarb 98.1 1.3E-05 5.6E-10 50.7 8.4 90 18-107 31-129 (133) 73 2p17_A Pirin-like protein; GK1 98.1 7.6E-05 3.4E-09 46.2 12.2 164 47-212 45-242 (277) 74 3es1_A Cupin 2, conserved barr 98.1 6E-05 2.7E-09 46.8 11.2 70 139-209 73-149 (172) 75 2fqp_A Hypothetical protein BP 98.0 1.8E-05 8E-10 49.8 8.2 64 136-199 9-80 (97) 76 1j1l_A Pirin; beta sandwich, c 98.0 0.00032 1.4E-08 42.5 14.5 188 25-212 19-243 (290) 77 3l2h_A Putative sugar phosphat 98.0 7.9E-06 3.5E-10 51.9 6.1 80 28-107 32-120 (162) 78 2ea7_A 7S globulin-1; beta bar 98.0 0.00038 1.7E-08 42.1 14.5 188 19-211 33-356 (434) 79 3cew_A Uncharacterized cupin p 98.0 2.4E-05 1E-09 49.1 8.3 74 141-214 22-104 (125) 80 1uij_A Beta subunit of beta co 98.0 0.00052 2.3E-08 41.3 14.9 165 45-212 52-341 (416) 81 3es1_A Cupin 2, conserved barr 98.0 6.6E-05 2.9E-09 46.5 10.1 99 10-109 26-152 (172) 82 2gu9_A Tetracenomycin polyketi 98.0 2.7E-05 1.2E-09 48.8 8.0 62 45-106 24-94 (113) 83 2o8q_A Hypothetical protein; s 98.0 4.9E-05 2.2E-09 47.3 9.4 115 1-124 2-129 (134) 84 1sq4_A GLXB, glyoxylate-induce 98.0 6E-05 2.7E-09 46.8 9.6 68 144-211 67-143 (278) 85 2oa2_A BH2720 protein; 1017534 97.9 4.3E-05 1.9E-09 47.6 8.7 75 136-210 34-121 (148) 86 2vpv_A Protein MIF2, MIF2P; nu 97.9 4.4E-05 2E-09 47.5 8.0 79 132-210 73-161 (166) 87 2ozi_A Hypothetical protein RP 97.9 2.5E-05 1.1E-09 49.0 6.6 65 135-199 7-80 (98) 88 3l2h_A Putative sugar phosphat 97.9 4.7E-05 2.1E-09 47.4 7.9 71 144-214 45-124 (162) 89 1j58_A YVRK protein; cupin, de 97.9 1.5E-05 6.8E-10 50.3 5.3 66 42-107 257-334 (385) 90 3i7d_A Sugar phosphate isomera 97.9 4.3E-05 1.9E-09 47.6 7.4 83 129-211 24-119 (163) 91 2phl_A Phaseolin; plant SEED s 97.8 0.00059 2.6E-08 40.9 12.9 167 45-212 55-324 (397) 92 1juh_A Quercetin 2,3-dioxygena 97.8 0.00016 7.2E-09 44.2 9.9 66 143-208 46-124 (350) 93 2o8q_A Hypothetical protein; s 97.8 0.0001 4.5E-09 45.4 8.8 83 129-211 21-116 (134) 94 2i45_A Hypothetical protein; n 97.8 1.1E-05 4.8E-10 51.1 3.7 60 45-106 32-97 (107) 95 2pyt_A Ethanolamine utilizatio 97.8 2.4E-05 1.1E-09 49.1 5.4 61 144-207 56-121 (133) 96 2gu9_A Tetracenomycin polyketi 97.8 6E-05 2.7E-09 46.8 7.2 76 135-210 11-95 (113) 97 1fi2_A Oxalate oxidase, germin 97.7 7.4E-05 3.3E-09 46.2 7.1 65 45-109 75-154 (201) 98 2vqa_A SLL1358 protein, MNCA; 97.7 0.00012 5.4E-09 45.0 8.0 80 27-106 217-310 (361) 99 1fi2_A Oxalate oxidase, germin 97.7 6.9E-05 3.1E-09 46.4 6.6 67 144-210 71-152 (201) 100 2fqp_A Hypothetical protein BP 97.7 0.00013 5.8E-09 44.8 7.8 73 27-103 7-88 (97) 101 2ozi_A Hypothetical protein RP 97.7 5.8E-05 2.6E-09 46.9 5.8 74 29-105 7-90 (98) 102 2d40_A Z3393, putative gentisa 97.7 0.00022 9.9E-09 43.4 8.4 67 143-209 98-170 (354) 103 2e9q_A 11S globulin subunit be 97.6 0.0019 8.7E-08 37.9 13.1 69 144-212 321-402 (459) 104 1y9q_A Transcriptional regulat 97.6 0.0004 1.8E-08 41.9 9.6 71 140-210 99-177 (192) 105 2qnk_A 3-hydroxyanthranilate 3 97.6 0.00024 1.1E-08 43.2 8.0 78 130-209 18-104 (286) 106 2pyt_A Ethanolamine utilizatio 97.6 0.00011 4.7E-09 45.3 5.8 95 12-108 24-125 (133) 107 2i45_A Hypothetical protein; n 97.6 7.9E-05 3.5E-09 46.1 5.1 68 138-209 23-97 (107) 108 3eqe_A Putative cystein deoxyg 97.5 0.00059 2.6E-08 41.0 8.5 68 27-97 57-138 (171) 109 1yfu_A 3-hydroxyanthranilate-3 97.5 0.00081 3.6E-08 40.2 9.2 88 24-115 21-117 (174) 110 3d0j_A Uncharacterized protein 97.4 0.00029 1.3E-08 42.8 6.7 63 45-107 28-107 (140) 111 2phd_A Gentisate 1,2-dioxygena 97.4 0.00033 1.5E-08 42.4 6.7 64 145-208 103-172 (368) 112 2vpv_A Protein MIF2, MIF2P; nu 97.4 0.00043 1.9E-08 41.8 6.7 80 26-106 73-160 (166) 113 2bnm_A Epoxidase; oxidoreducta 97.3 0.0014 6.4E-08 38.7 8.9 79 133-211 102-197 (198) 114 3bu7_A Gentisate 1,2-dioxygena 97.3 0.0009 4E-08 39.9 7.7 81 23-106 272-365 (394) 115 1y9q_A Transcriptional regulat 97.2 0.0018 8E-08 38.1 8.9 75 26-100 88-168 (192) 116 2d5f_A Glycinin A3B4 subunit; 97.2 0.0093 4.2E-07 33.9 13.9 70 144-213 366-448 (493) 117 2opk_A Hypothetical protein; s 97.1 0.0062 2.7E-07 35.0 10.7 73 137-209 23-105 (112) 118 3d0j_A Uncharacterized protein 97.1 0.00057 2.6E-08 41.0 4.9 78 132-210 12-107 (140) 119 1dgw_A Canavalin; duplicated s 97.0 0.0014 6.4E-08 38.7 6.6 66 44-109 43-118 (178) 120 1x82_A Glucose-6-phosphate iso 97.0 0.0064 2.8E-07 34.9 9.9 57 42-98 67-141 (190) 121 2bnm_A Epoxidase; oxidoreducta 97.0 0.0049 2.2E-07 35.6 9.0 90 12-101 84-187 (198) 122 3eqe_A Putative cystein deoxyg 97.0 0.0048 2.1E-07 35.6 8.9 74 135-208 59-148 (171) 123 1zrr_A E-2/E-2' protein; nicke 96.9 0.00064 2.8E-08 40.8 4.0 51 159-209 94-153 (179) 124 1vr3_A Acireductone dioxygenas 96.9 0.0023 1E-07 37.5 6.8 65 146-210 75-159 (191) 125 1x82_A Glucose-6-phosphate iso 96.8 0.0075 3.3E-07 34.5 8.9 65 144-208 66-149 (190) 126 1yfu_A 3-hydroxyanthranilate-3 96.8 0.004 1.8E-07 36.1 7.5 78 132-210 23-109 (174) 127 2cav_A Protein (canavalin); vi 96.7 0.0036 1.6E-07 36.4 6.4 68 144-211 85-162 (445) 128 3fz3_A Prunin; TREE NUT allerg 96.6 0.0044 1.9E-07 35.9 6.4 69 144-212 393-474 (531) 129 3kgl_A Cruciferin; 11S SEED gl 96.6 0.03 1.3E-06 31.0 14.4 68 144-211 322-402 (466) 130 3c3v_A Arachin ARAH3 isoform; 96.5 0.0045 2E-07 35.8 5.6 69 144-212 371-452 (510) 131 3ksc_A LEGA class, prolegumin; 96.4 0.0076 3.4E-07 34.5 6.4 69 144-212 357-438 (496) 132 2gm6_A Cysteine dioxygenase ty 96.2 0.04 1.8E-06 30.2 9.5 72 26-98 64-152 (208) 133 1dgw_A Canavalin; duplicated s 96.2 0.0081 3.6E-07 34.3 5.7 68 143-210 39-116 (178) 134 1zrr_A E-2/E-2' protein; nicke 96.2 0.0066 2.9E-07 34.8 5.2 69 43-111 72-158 (179) 135 1uij_A Beta subunit of beta co 96.1 0.016 7.1E-07 32.6 7.0 66 145-210 49-124 (416) 136 2vec_A YHAK, pirin-like protei 95.9 0.0082 3.7E-07 34.3 4.6 61 150-210 69-143 (256) 137 3fz3_A Prunin; TREE NUT allerg 95.8 0.015 6.8E-07 32.7 5.5 63 43-105 395-469 (531) 138 1vr3_A Acireductone dioxygenas 95.7 0.048 2.1E-06 29.8 8.0 86 26-111 46-163 (191) 139 3g7d_A PHPD; non heme Fe(II) d 95.7 0.046 2.1E-06 29.9 7.7 69 146-216 335-413 (443) 140 2ea7_A 7S globulin-1; beta bar 95.6 0.028 1.3E-06 31.1 6.3 58 44-101 268-348 (434) 141 3bcw_A Uncharacterized protein 95.4 0.046 2.1E-06 29.9 7.1 76 133-209 35-118 (123) 142 3ksc_A LEGA class, prolegumin; 95.3 0.031 1.4E-06 30.9 5.8 66 45-110 49-145 (496) 143 2gm6_A Cysteine dioxygenase ty 95.2 0.13 5.8E-06 27.3 9.7 72 133-204 65-157 (208) 144 2phl_A Phaseolin; plant SEED s 95.1 0.055 2.4E-06 29.4 6.5 55 146-200 53-122 (397) 145 2p17_A Pirin-like protein; GK1 95.0 0.042 1.9E-06 30.1 5.8 11 11-21 81-91 (277) 146 2d5f_A Glycinin A3B4 subunit; 95.0 0.028 1.2E-06 31.2 4.8 64 47-110 50-148 (493) 147 3c3v_A Arachin ARAH3 isoform; 95.0 0.035 1.5E-06 30.6 5.3 65 45-109 51-160 (510) 148 3g7d_A PHPD; non heme Fe(II) d 94.8 0.076 3.4E-06 28.6 6.7 101 14-115 304-414 (443) 149 2e9q_A 11S globulin subunit be 94.8 0.033 1.5E-06 30.7 4.8 70 41-110 62-162 (459) 150 3bcw_A Uncharacterized protein 94.8 0.13 5.7E-06 27.3 7.8 58 43-101 50-112 (123) 151 2arc_A ARAC, arabinose operon 94.8 0.093 4.2E-06 28.1 7.0 51 48-98 19-78 (164) 152 1tq5_A Protein YHHW; bicupin, 94.5 0.018 7.9E-07 32.3 2.8 24 9-33 81-104 (242) 153 2opk_A Hypothetical protein; s 94.5 0.19 8.6E-06 26.2 10.5 74 28-104 20-103 (112) 154 1j1l_A Pirin; beta sandwich, c 94.1 0.17 7.7E-06 26.5 7.1 21 9-30 81-101 (290) 155 1o5u_A Novel thermotoga mariti 93.6 0.055 2.4E-06 29.5 3.8 35 166-200 50-90 (101) 156 3kgl_A Cruciferin; 11S SEED gl 93.1 0.12 5.2E-06 27.5 4.9 64 47-110 48-180 (466) 157 1zvf_A 3-hydroxyanthranilate 3 93.0 0.37 1.6E-05 24.6 10.3 88 23-115 20-119 (176) 158 1zx5_A Mannosephosphate isomer 92.8 0.081 3.6E-06 28.5 3.7 113 80-201 162-288 (300) 159 1eyb_A Homogentisate 1,2-dioxy 91.8 0.52 2.3E-05 23.7 7.9 101 4-107 108-227 (471) 160 3eln_A Cysteine dioxygenase ty 91.8 0.34 1.5E-05 24.8 5.9 50 25-76 55-105 (200) 161 1qwr_A Mannose-6-phosphate iso 88.1 1.1 4.7E-05 21.9 11.1 124 80-209 162-316 (319) 162 1dgw_X Canavalin; duplicated s 87.3 0.3 1.3E-05 25.1 2.8 31 145-175 36-68 (79) 163 1pmi_A PMI, phosphomannose iso 86.2 1.4 6E-05 21.3 12.2 124 80-210 270-436 (440) 164 1dzr_A DTDP-4-dehydrorhamnose 81.4 2.2 9.7E-05 20.1 6.9 103 21-123 5-151 (183) 165 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 77.4 2.9 0.00013 19.3 7.0 106 17-122 3-150 (185) 166 2wfp_A Mannose-6-phosphate iso 67.1 5.2 0.00023 17.9 9.4 109 80-196 244-378 (394) 167 2zkl_A Capsular polysaccharide 59.3 7.3 0.00032 17.0 10.1 79 133-211 260-353 (369) 168 2qjv_A Uncharacterized IOLB-li 53.2 9.2 0.00041 16.4 15.3 162 45-209 32-241 (270) 169 2pa7_A DTDP-6-deoxy-3,4-keto-h 52.0 9.6 0.00043 16.3 6.1 60 152-211 42-112 (141) 170 1vrb_A Putative asparaginyl hy 46.3 12 0.00053 15.8 5.0 27 181-208 221-247 (342) 171 1vp6_A CNBD, cyclic-nucleotide 36.8 17 0.00075 14.9 4.7 64 146-210 33-105 (138) 172 3k3o_A PHF8, PHD finger protei 36.7 12 0.00053 15.8 1.7 27 181-208 220-246 (371) 173 2c0z_A NOVW; isomerase, epimer 34.9 18 0.0008 14.7 5.4 108 14-121 6-157 (216) 174 1oi6_A PCZA361.16; epimerase, 33.0 19 0.00086 14.5 5.2 102 19-120 2-148 (205) 175 3ejk_A DTDP sugar isomerase; Y 31.5 21 0.00091 14.4 9.3 103 21-123 16-156 (174) 176 3iwz_A CAP-like, catabolite ac 31.4 21 0.00092 14.4 6.1 61 46-106 36-112 (230) 177 3kv9_A JMJC domain-containing 26.5 22 0.001 14.1 1.7 27 181-208 248-274 (397) 178 3bb6_A Uncharacterized protein 26.1 26 0.0011 13.8 6.9 27 183-209 70-96 (127) 179 3hg9_A PILM; structural genomi 25.4 26 0.0012 13.8 1.9 17 200-216 113-129 (131) 180 3bpz_A Potassium/sodium hyperp 24.8 27 0.0012 13.7 6.4 64 146-210 94-168 (202) 181 3gyd_A CNMP-BD protein, cyclic 22.2 31 0.0014 13.4 4.4 64 146-210 61-140 (187) 182 2yu1_A JMJC domain-containing 21.7 31 0.0014 13.3 3.0 27 181-208 269-295 (451) 183 1wlt_A 176AA long hypothetical 21.1 32 0.0014 13.2 5.2 27 185-211 127-153 (196) 184 3e6c_C CPRK, cyclic nucleotide 20.8 33 0.0015 13.2 6.4 61 46-106 34-106 (250) 185 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 20.6 33 0.0015 13.2 4.0 99 25-123 18-159 (197) 186 1upi_A DTDP-4-dehydrorhamnose 20.1 34 0.0015 13.1 6.4 26 83-108 128-154 (225) No 1 >2qdr_A Uncharacterized protein; ZP_00345151.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme pcc 73102} Probab=100.00 E-value=1.4e-45 Score=284.74 Aligned_cols=185 Identities=16% Similarity=0.091 Sum_probs=157.0 Q ss_pred EEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCEE---CCCCEEEE Q ss_conf 799950268870579999995689857888777646999987788727861168616885889822326---48880899 Q T0582 29 ERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQDEHGDYPAGTYVRNPPTTSHVPG---SAEGCTIF 105 (222) Q Consensus 29 ~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d~~~~~~~G~y~~~p~gs~H~p~---s~~Gc~~~ 105 (222) .|++|. .. ++|..|++|+|+||+..|++.|.+.+|||||+|+|.|++++|++|+|++||+|++|.|+ |++||+|| T Consensus 80 ~r~l~~-~~-dtGa~s~~V~f~~g~~~PpGi~~ad~EifVLEG~f~dg~g~ypaGsY~rnPaG~sh~P~~v~S~~G~~Il 157 (303) T 2qdr_A 80 SRRLLT-WH-DSGASTSRVVLPPKFEAPSGIFTADLEIFVIKGAIQLGEWQLNKHSYSFIPAGVRIGSWKVLGGEEAEIL 157 (303) T ss_dssp EEEEEE-EC-TTSCEEEEEEECTTCEECCBEESSCEEEEEEESEEEETTEEECTTEEEEECTTCCBCCEEEETTSCEEEE T ss_pred CCCCCE-EC-CCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCEEECCCCEEECCCCCCCCCEEECCCCCEEEE T ss_conf 301011-15-8886058999678766899643376789999758998997806970786489873486440489876999 Q ss_pred EEEECCCCCC--------------CCEEEECCCHHCCCCC--CCEEE---EEEECC-CCCEEEEEEECCCCCCC-CCC-C Q ss_conf 9900279566--------------5607807613506666--86278---987208-98489999968897447-769-8 Q T0582 106 VKLWQFDPAD--------------RTQFSKNMEAELGAPV--EGIST---SLLHED-ERETVTHRKLEPGANLT-SEA-A 163 (222) Q Consensus 106 vkl~q~~~~d--------------~~~v~idt~~~~~~~~--~Gv~~---~~L~~~-~~e~v~L~r~~pG~~~p-~h~-h 163 (222) |||+|+.+.| +..+.+|+.++.|.++ .+.+. +.|..+ +++.+.|+.+.|+..-. .|+ . T Consensus 158 vkl~q~~p~d~~~~~~~~p~a~~~~~i~vidt~~~pW~~G~~~~~~v~~~kllr~dpe~~~t~L~~~~P~~~~~~~~~Hp 237 (303) T 2qdr_A 158 WMENGSVPLEYKYAQEDHPDARLSDFIPALDSKLLPWGKADTVQFVQANKKWLRKDINGGGVWLLAILPHFDNKYQMIQP 237 (303) T ss_dssp EEECSSSCCCEECCSSCCTTCCGGGCEEEEEGGGSCCEECSSSTTCSEEEEEEEECTTSCEEEEEEECSSEECCSEEEEC T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCEEEEEEECCCCCCCCCCCCCC T ss_conf 97587786422322245754311330201453128655478667531000010137884289997238875577531268 Q ss_pred CCEEEEEEEEEEEECCCEECCCEEEECCCCCCEEEEECCCCCEEEEEEC-CCC Q ss_conf 8679999877898289321686179818998022488898829999836-857 Q T0582 164 GGIEVLVLDGDVTVNDEVLGRNAWLRLPEGEALSATAGARGAKIWMKTG-HLR 215 (222) Q Consensus 164 ~GeEi~VLeG~l~d~~~~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vKTG-HL~ 215 (222) .|||+|||+|.|.++.+.|.+|+|+|+||++.|.++++++||++||||+ ||. T Consensus 238 ~gEEifVLsG~f~~g~G~~~~Gsy~rrPp~~~Hgpf~s~eG~li~VRtd~~l~ 290 (303) T 2qdr_A 238 YNEEGYCLTGYCDVGDYRIVKDHYWYCPSFSTLPRHITDDGGLFFVRVDRDLS 290 (303) T ss_dssp SCEEEEEEEEEEEETTEEEETTEEEEECTTEEECCEEESSCEEEEEEESSCTT T ss_pred CCEEEEEEEEEEEECCEEECCCCEEECCCCCCCCCCCCCCCEEEEEEECCHHH T ss_conf 82699999878886984375898897899987888558797599999593330 No 2 >3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii} Probab=99.91 E-value=5.2e-24 Score=158.36 Aligned_cols=121 Identities=19% Similarity=0.271 Sum_probs=102.2 Q ss_pred CCCCCCCEEEEECCCCCCEECCC----CCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCC Q ss_conf 15677841677056466331588----95579995026887057999999568985788877764699998778872786 Q T0582 3 INADFTKPVVIDTDQLEWRPSPM----KGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQDEHG 78 (222) Q Consensus 3 ~~~d~~~~~~v~~~~~~W~~~p~----~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d~~~ 78 (222) .|.++++..+|+.++++|+|+|. +|+.+|+|. .+.++|.+|.|+||+||+.+|.|.|++.|++|||+|.|.++.+ T Consensus 4 ~~~~~~~~~~v~~dd~~W~P~p~~~~~~Gv~~k~L~-~d~e~G~~~~llr~~~G~~~p~H~H~~~e~~~Vl~G~~~~~~g 82 (153) T 3bal_A 4 CNKKHTAEEYVKISDNNYVPFPEAFSDGGITWQLLH-SSPETSSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRGG 82 (153) T ss_dssp CCCCCCCCEEEECCGGGCEECCGGGEESCCEEEEEE-EETTTTEEEEEEEECTTEEECCEEESSCEEEEEEESEEEETTC T ss_pred CCCCCCHHHEECCCCCCCEECCCCCCCCCEEEEEEE-ECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCC T ss_conf 458768745684657862518866678985999974-7787773999999789964588877636699998458998267 Q ss_pred C------CCCCCEEECCCCCCCCEE-CCCCEEEEEEEE----CCCCCCCCEEEECCC Q ss_conf 1------168616885889822326-488808999900----279566560780761 Q T0582 79 D------YPAGTYVRNPPTTSHVPG-SAEGCTIFVKLW----QFDPADRTQFSKNME 124 (222) Q Consensus 79 ~------~~~G~y~~~p~gs~H~p~-s~~Gc~~~vkl~----q~~~~d~~~v~idt~ 124 (222) + .++|+|+++|+|+.|++. .+++|.+++... .+++.+...+.++-. T Consensus 83 ~~~~~~~~~aG~y~~ePaG~~H~~~~~~e~t~~l~~~~Gp~~~~d~dg~~~~~~~~~ 139 (153) T 3bal_A 83 EQEGGSTAYAPSYGFESSGALHGKTFFPVESQFYMTFLGPLNFIDDNGKVIASIGWA 139 (153) T ss_dssp GGGTSEEEESSEEEEECTTCEESCCEESSCEEEEEEEESCEEEECTTSCEEEEECHH T ss_pred CCCCCCEEECCEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCEEEEECHH T ss_conf 657884760363898389996565318998499999716715678999998996089 No 3 >2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha subunit; ZP_00243239.1, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum PM1} SCOP: b.82.1.21 Probab=99.86 E-value=5e-22 Score=146.74 Aligned_cols=106 Identities=22% Similarity=0.428 Sum_probs=90.3 Q ss_pred EEEEECCCCCCEECC----CCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC--- Q ss_conf 167705646633158----8955799950268870579999995689857888777646999987788727861168--- Q T0582 10 PVVIDTDQLEWRPSP----MKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQDEHGDYPA--- 82 (222) Q Consensus 10 ~~~v~~~~~~W~~~p----~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d~~~~~~~--- 82 (222) ..+|++++++|+|.| .+|+++|+| +.+.++|.+|.|+||+||+.+|.|.|.+.|++|||+|.|.++.+++.+ T Consensus 9 ~~~v~~dd~~W~P~~~~~~~~G~~~k~L-~~d~~~G~~~~l~r~~~G~~~p~H~H~~~e~~~VL~G~~~~~~g~~~~g~~ 87 (145) T 2o1q_A 9 EEYVQMDQVDWKPFPAAFSTGGIRWKLL-HVSPEMGSWTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRGGKAAGGDT 87 (145) T ss_dssp CCCCCGGGSCCEECCGGGEESCCEEEEE-EEETTTTEEEEEEEECTTEEECCEEESSCEEEEEEEEEEEETTCGGGTSEE T ss_pred HCEECCCCCCCEECCCCCCCCCEEEEEE-EECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCE T ss_conf 0089777885567887668898699986-557888739999997889794888122189999996699926787578857 Q ss_pred ---CCEEECCCCCCCCEE-CCCCEEEEEEEE----CCCCCCC Q ss_conf ---616885889822326-488808999900----2795665 Q T0582 83 ---GTYVRNPPTTSHVPG-SAEGCTIFVKLW----QFDPADR 116 (222) Q Consensus 83 ---G~y~~~p~gs~H~p~-s~~Gc~~~vkl~----q~~~~d~ 116 (222) |+|+++|+|+.|.+. ++++|.+|+-.. .+++.+. T Consensus 88 ~~~G~y~~~PaG~~H~~~~~~e~~~~~~~~~Gp~~~ld~dg~ 129 (145) T 2o1q_A 88 AIAPGYGYESANARHDKTEFPVASEFYMSFLGPLTFVKPDGS 129 (145) T ss_dssp EESSEEEEECTTCEESCCEEEEEEEEEEEEESCEEEECTTSC T ss_pred EECCCEEEECCCCEECCCCCCCCEEEEEEEECCEEEECCCCC T ss_conf 737817884799858653089887999999688389889999 No 4 >2qdr_A Uncharacterized protein; ZP_00345151.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme pcc 73102} Probab=99.84 E-value=1.5e-20 Score=138.11 Aligned_cols=112 Identities=15% Similarity=0.074 Sum_probs=92.8 Q ss_pred EEEEECCCCCCEECCCCC--E-EEEEEECCCCCEEEEEEEEEECCCCCC-CCCCCCCCEEEEEEEEEEECCCCCCCCCCE Q ss_conf 167705646633158895--5-799950268870579999995689857-888777646999987788727861168616 Q T0582 10 PVVIDTDQLEWRPSPMKG--V-ERRMLDRIGGEVARATSIVRYAPGSRF-SAHTHDGGEEFIVLDGVFQDEHGDYPAGTY 85 (222) Q Consensus 10 ~~~v~~~~~~W~~~p~~G--v-~~~~L~~~~~e~g~~t~lvr~~pG~~~-p~H~H~~~ee~~VL~G~~~d~~~~~~~G~y 85 (222) ..++++.+++|.+.+..+ + ..|.| +.+.++ .+|.|+...|+... +.|.|+++||+|||+|.|.+++++|++|+| T Consensus 184 i~vidt~~~pW~~G~~~~~~v~~~kll-r~dpe~-~~t~L~~~~P~~~~~~~~~Hp~gEEifVLsG~f~~g~G~~~~Gsy 261 (303) T 2qdr_A 184 IPALDSKLLPWGKADTVQFVQANKKWL-RKDING-GGVWLLAILPHFDNKYQMIQPYNEEGYCLTGYCDVGDYRIVKDHY 261 (303) T ss_dssp EEEEEGGGSCCEECSSSTTCSEEEEEE-EECTTS-CEEEEEEECSSEECCSEEEECSCEEEEEEEEEEEETTEEEETTEE T ss_pred EECCCCCCCCCCCCCCCCCCCCEEHHH-CCCCCC-EEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCEEECCCCE T ss_conf 201453128655478667531000010-137884-289997238875577531268826999998788869843758988 Q ss_pred EECCCCCCCCEE-CCCCEEEEEEEECCCCCCCCEEEECC Q ss_conf 885889822326-48880899990027956656078076 Q T0582 86 VRNPPTTSHVPG-SAEGCTIFVKLWQFDPADRTQFSKNM 123 (222) Q Consensus 86 ~~~p~gs~H~p~-s~~Gc~~~vkl~q~~~~d~~~v~idt 123 (222) +++||++.|.|+ |++||++|||..+......+++..++ T Consensus 262 ~rrPp~~~Hgpf~s~eG~li~VRtd~~l~~~~t~~~~~~ 300 (303) T 2qdr_A 262 WYCPSFSTLPRHITDDGGLFFVRVDRDLSKVATVLSYAP 300 (303) T ss_dssp EEECTTEEECCEEESSCEEEEEEESSCTTSTTSSEEECC T ss_pred EECCCCCCCCCCCCCCCEEEEEEECCHHHEEEEEEEECC T ss_conf 978999878885587975999995933300378777546 No 5 >3cjx_A Protein of unknown function with A cupin-like fold; YP_298765.1, protein with A cupin-like fold and unknown function; HET: MSE; 2.60A {Ralstonia eutropha JMP134} Probab=99.83 E-value=1.9e-20 Score=137.48 Aligned_cols=112 Identities=19% Similarity=0.247 Sum_probs=90.4 Q ss_pred CCEEEEECCCCCCEECC--CCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECC---CCCCCC Q ss_conf 84167705646633158--8955799950268870579999995689857888777646999987788727---861168 Q T0582 8 TKPVVIDTDQLEWRPSP--MKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQDE---HGDYPA 82 (222) Q Consensus 8 ~~~~~v~~~~~~W~~~p--~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d~---~~~~~~ 82 (222) .+.++||+.++||.+.+ .+|+++|+| +.+.++|.++.|+||+||+.+|.|.|.+.+++|||+|.|.+. ...+++ T Consensus 8 ~~ll~vdt~~~Pw~~~~~~~~Gv~~kpL-~~d~~tG~~~~lvr~~pG~~~p~H~H~g~~~~~VL~G~~~y~e~~~~~~~a 86 (165) T 3cjx_A 8 EKLLTVDTTAHPFLKALGGHEGTDIFPL-FMDPYNGLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYTEYPGQKQTA 86 (165) T ss_dssp CSCEEEETTSSCCBCSGGGCTTEEEEEE-EEETTTTEEEEEEEECTTCBCCEEEESSCEEEEEEESEEEETTCTTSCEET T ss_pred CEEEEEECCCCCCCCCCCCCCCCEEEEE-EECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEECC T ss_conf 0279873776777527889999789883-686889869999998999997588968698999995468986389818899 Q ss_pred CCEEECCCCCCCCEECCC----CEEEEEEE----ECCCCCCCCEEEE Q ss_conf 616885889822326488----80899990----0279566560780 Q T0582 83 GTYVRNPPTTSHVPGSAE----GCTIFVKL----WQFDPADRTQFSK 121 (222) Q Consensus 83 G~y~~~p~gs~H~p~s~~----Gc~~~vkl----~q~~~~d~~~v~i 121 (222) |+|+++|+|+.|++.+.+ ++.+|.-. ..+++ |.+.+.+ T Consensus 87 G~y~~eP~G~~Ht~~~~~d~~e~~~~lf~~~G~~~~ld~-dG~~~~~ 132 (165) T 3cjx_A 87 GCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNVNFTQ-DGTYLGL 132 (165) T ss_dssp TEEEEECTTCEECEECCTTCSSCEEEEEEEESCEEEECT-TCCEEEE T ss_pred CEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCEEEECC-CCCEEEE T ss_conf 738997988945461578888678999994467799889-9999577 No 6 >2q1z_B Anti-sigma factor CHRR, transcriptional activator CHRR; ECF sigma factor, cupin fold, zinc binding transcription factor; 2.40A {Rhodobacter sphaeroides 2} PDB: 2z2s_B Probab=99.83 E-value=6.1e-20 Score=134.51 Aligned_cols=90 Identities=27% Similarity=0.467 Sum_probs=47.6 Q ss_pred ECCCCCCEECCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEECCCCCC Q ss_conf 05646633158895579995026887057999999568985788877764699998778872786116861688588982 Q T0582 14 DTDQLEWRPSPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQDEHGDYPAGTYVRNPPTTS 93 (222) Q Consensus 14 ~~~~~~W~~~p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d~~~~~~~G~y~~~p~gs~ 93 (222) +.++++|. +..+||+.+.|...+. . .++|+|++||+.+|.|.|.|.|++|||+|.|+|++|+|.+|+|+++++++. T Consensus 101 ~~~~l~W~-~~~~gv~~~~l~~~~~--~-~~~Ll~~~pg~~~p~H~H~g~E~tlvL~G~f~d~~g~y~~Gd~~~~~~~~~ 176 (195) T 2q1z_B 101 RLEDVRWR-TLGGGVRQAILPTGGE--A-IARLLWIPGGQAVPDHGHRGLELTLVLQGAFRDETDRFGAGDIEIADQELE 176 (195) T ss_dssp CTTCSCCE-ECSSSCEEEEECCSSS--S-EEEEEEECTTCBCCCCCCSSCEEEEEEESEEECSSSEEETTCEEEECSSCC T ss_pred CCCCCCCC-CCCCCEEEEEECCCCC--H-HCEEEEECCCCCCCCEECCCEEEEEEEEEEEEECCCCCCCCCEEECCCCCC T ss_conf 77778601-2468608988426763--1-008899789998881402884899999889996998288981797598896 Q ss_pred CCEECCCC--EEEEEE Q ss_conf 23264888--089999 Q T0582 94 HVPGSAEG--CTIFVK 107 (222) Q Consensus 94 H~p~s~~G--c~~~vk 107 (222) |+|++.+| |+.|.- T Consensus 177 H~P~~~~~~~Ciclav 192 (195) T 2q1z_B 177 HTPVAERGLDCICLAA 192 (195) T ss_dssp CCCEECSSSCEEEEEE T ss_pred CCCCCCCCCCEEEEEE T ss_conf 0624489998699998 No 7 >3ebr_A Uncharacterized RMLC-like cupin; YP_294607.1, RMLC-like cupin with unknown function, structural genomics; 2.60A {Ralstonia eutropha JMP134} Probab=99.79 E-value=1.7e-19 Score=131.93 Aligned_cols=92 Identities=22% Similarity=0.350 Sum_probs=80.3 Q ss_pred EEEEECCCCCCEECC--CCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCC--CCCCCCCE Q ss_conf 167705646633158--89557999502688705799999956898578887776469999877887278--61168616 Q T0582 10 PVVIDTDQLEWRPSP--MKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQDEH--GDYPAGTY 85 (222) Q Consensus 10 ~~~v~~~~~~W~~~p--~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d~~--~~~~~G~y 85 (222) ...+++++++|+|.+ .+|+++|+| +.+.++|.++.|+|++||+.+|.|.|++.+++|||+|.|.+.. ..+.+|+| T Consensus 9 ~~~id~~d~pW~p~~~~~~G~~~k~L-~~d~~~G~~~~l~r~~~G~~~p~H~H~~~~~~~vl~G~~~~~~~~~~~~~G~~ 87 (159) T 3ebr_A 9 TGCLDGNDTPWMPFAPYSNDVMVKYF-KIDPVRGETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYKEHDWVAHAGSV 87 (159) T ss_dssp CCCCCGGGSCCEECTTTCSSSEEEEE-EEETTTTEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEETTSSCCBCTTCE T ss_pred CCEECCCCCCCEECCCCCCCEEEEEE-EECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEECCCEE T ss_conf 14167567866548999998299996-78788983999999999989688687888589999769998579887708869 Q ss_pred EECCCCCCCCEEC--CCCE Q ss_conf 8858898223264--8880 Q T0582 86 VRNPPTTSHVPGS--AEGC 102 (222) Q Consensus 86 ~~~p~gs~H~p~s--~~Gc 102 (222) +++|+|+.|+|.+ .++| T Consensus 88 ~~~P~G~~H~~~~~~~e~~ 106 (159) T 3ebr_A 88 VYETASTRHTPQSAYAEGP 106 (159) T ss_dssp EEECSSEEECEEESSSSSS T ss_pred EEECCCCCCCCCCCCCCCC T ss_conf 9869998106755689983 No 8 >2q1z_B Anti-sigma factor CHRR, transcriptional activator CHRR; ECF sigma factor, cupin fold, zinc binding transcription factor; 2.40A {Rhodobacter sphaeroides 2} PDB: 2z2s_B Probab=99.79 E-value=6.7e-19 Score=128.42 Aligned_cols=86 Identities=14% Similarity=0.131 Sum_probs=77.2 Q ss_pred HCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEE-EEEEEEEEEECCCEECCCEEEECCCCCCEEEEECC-C Q ss_conf 506666862789872089848999996889744776988679-99987789828932168617981899802248889-8 Q T0582 126 ELGAPVEGISTSLLHEDERETVTHRKLEPGANLTSEAAGGIE-VLVLDGDVTVNDEVLGRNAWLRLPEGEALSATAGA-R 203 (222) Q Consensus 126 ~~~~~~~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeE-i~VLeG~l~d~~~~~~~Gs~i~~P~g~~H~~~a~~-~ 203 (222) .|+..++|++.+.|..+++++++|+|++||+.+|.|.|.|.| +|||+|+|+|+++.|.+|||++.++++.|+|++.. + T Consensus 106 ~W~~~~~gv~~~~l~~~~~~~~~Ll~~~pg~~~p~H~H~g~E~tlvL~G~f~d~~g~y~~Gd~~~~~~~~~H~P~~~~~~ 185 (195) T 2q1z_B 106 RWRTLGGGVRQAILPTGGEAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFRDETDRFGAGDIEIADQELEHTPVAERGL 185 (195) T ss_dssp CCEECSSSCEEEEECCSSSSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEECSSSEEETTCEEEECSSCCCCCEECSSS T ss_pred CCCCCCCCEEEEEECCCCCHHCEEEEECCCCCCCCEECCCEEEEEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCC T ss_conf 60124686089884267631008899789998881402884899999889996998288981797598896062448999 Q ss_pred CCEEEEEE Q ss_conf 82999983 Q T0582 204 GAKIWMKT 211 (222) Q Consensus 204 Gc~i~vKT 211 (222) +|+||.-+ T Consensus 186 ~Ciclav~ 193 (195) T 2q1z_B 186 DCICLAAT 193 (195) T ss_dssp CEEEEEEE T ss_pred CEEEEEEE T ss_conf 86999985 No 9 >1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein structure initiative; 2.05A {Enterococcus faecalis V583} SCOP: b.82.1.11 Probab=99.75 E-value=3.2e-16 Score=112.73 Aligned_cols=199 Identities=16% Similarity=0.203 Sum_probs=127.0 Q ss_pred EEEECCCCCCEECCCCCEE---EEEEECCCCCEEEEEEEEEECCCCCCC-CCCCCCCEE-EEEEEEEEEC--CC--CCCC Q ss_conf 6770564663315889557---999502688705799999956898578-887776469-9998778872--78--6116 Q T0582 11 VVIDTDQLEWRPSPMKGVE---RRMLDRIGGEVARATSIVRYAPGSRFS-AHTHDGGEE-FIVLDGVFQD--EH--GDYP 81 (222) Q Consensus 11 ~~v~~~~~~W~~~p~~Gv~---~~~L~~~~~e~g~~t~lvr~~pG~~~p-~H~H~~~ee-~~VL~G~~~d--~~--~~~~ 81 (222) ++|-+++.-| +..||-+ ..+|.+-.....-...|+.++||+... .|.|++.|| +|||+|...- ++ .... T Consensus 30 avi~~~~~v~--s~lPgw~~~~~~il~~P~~Ga~F~~ylv~v~pGg~~~~~~~~~g~Ee~i~Vl~G~~~v~~~g~~~~L~ 107 (274) T 1sef_A 30 AIIPHDGLVQ--NAVPGFENVDISILGSPKLGATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQETHELE 107 (274) T ss_dssp EEECGGGCCC--CCCTTEEEEEEEECSCGGGTCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSCEEEEE T ss_pred EEECCCCEEE--CCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECEEEEEECCEEEEEC T ss_conf 8848977372--46999887699999287668813899999977972688888998379999995989999999999978 Q ss_pred CCCEEECCCCCCCCEE--CCCCEEEEE--EEECCCCCCCC-EEEECCCHHCCC---CCCCEEEEEEECCC---CCEEEEE Q ss_conf 8616885889822326--488808999--90027956656-078076135066---66862789872089---8489999 Q T0582 82 AGTYVRNPPTTSHVPG--SAEGCTIFV--KLWQFDPADRT-QFSKNMEAELGA---PVEGISTSLLHEDE---RETVTHR 150 (222) Q Consensus 82 ~G~y~~~p~gs~H~p~--s~~Gc~~~v--kl~q~~~~d~~-~v~idt~~~~~~---~~~Gv~~~~L~~~~---~e~v~L~ 150 (222) +|+|++.|+|..|... +++.|.+++ |..+-.++... ++..+..++... ..++.....|..+. .-.+.++ T Consensus 108 ~Gd~~y~pag~~h~~~N~~~~~a~~~~i~k~y~~~eg~~p~~~~~~~~d~~p~~~~~~~~~~~~~llP~d~~~~~~~~i~ 187 (274) T 1sef_A 108 AGGYAYFTPEMKMYLANAQEADTEVFLYKKRYQPLAGHQPYKVVGSIHDQQPEEYEGMTDVLLWSLLPKEFDFDMNMHIL 187 (274) T ss_dssp TTEEEEECTTSCCEEEESSSSCEEEEEEEEECCCCTTCCCCCEEEEGGGSCCEEGGGCTTEEEEECSCSSTTCSEEEEEE T ss_pred CCCEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEE T ss_conf 99999988998599996899988999999773146665875445751017764467665258995167766565489999 Q ss_pred EECCCCCCCC-CCCCCEE-EEEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEE-CCCCCE--EEEEE Q ss_conf 9688974477-6988679-9998778982--893--21686179818998022488-898829--99983 Q T0582 151 KLEPGANLTS-EAAGGIE-VLVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATA-GARGAK--IWMKT 211 (222) Q Consensus 151 r~~pG~~~p~-h~h~GeE-i~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a-~~~Gc~--i~vKT 211 (222) .++||+.++. |+|..|| +|||+|+... ++. ...+||+++.|++..|...+ +++..+ ++.|. T Consensus 188 ~~~PG~~~~~~h~H~~ee~~~vLeG~g~~~l~~~~~~v~~GD~i~~~~~~pH~~~~~G~~~~~~yl~~k~ 257 (274) T 1sef_A 188 SFEPGASHAYIETHVQEHGAYLISGQGMYNLDNEWYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSKD 257 (274) T ss_dssp EECTTCBCSSCBCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEEE T ss_pred EECCCEECCCCCCCCCCEEEEEECCEEEEEECCEEEEECCCCEEEECCCCCEEEECCCCCCCEEEEEEEE T ss_conf 9999806665317986569999857899999999999669989998999978505189998689999930 No 10 >3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI- cupin, double stranded beta helix; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* Probab=99.71 E-value=1.3e-16 Score=114.98 Aligned_cols=204 Identities=11% Similarity=0.129 Sum_probs=137.0 Q ss_pred CCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--CCC Q ss_conf 951567784167705646633158895579995026887057999999568985788877764699998778872--786 Q T0582 1 MEINADFTKPVVIDTDQLEWRPSPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EHG 78 (222) Q Consensus 1 m~~~~d~~~~~~v~~~~~~W~~~p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~~~ 78 (222) ||.+.|..+-.+..++...|. .||.+..+..++ . .-.++.++||+.+|.|.|+..|.+|||+|.+.. ++. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~----~gv~~~~~~~~~--~--~v~~~~i~PG~~~~~H~H~~ee~~~vl~G~~~~~i~~~ 72 (243) T 3h7j_A 1 MKTKEDMQELYFPTPKLIEWE----NGVRQYSTVRGD--T--EVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTVGDV 72 (243) T ss_dssp -CCHHHHHHHHSCCCEEEECT----TSCEEEEEEETT--E--EEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEETTE T ss_pred CCCHHHHHHHCCCCCCCCCCC----CCCEEEEEECCC--E--EEEEEEECCCCCCCCEECCCCEEEEEEECCEEEEECCE T ss_conf 952332142244676642125----580678883699--6--99999989898778576788879999769899999999 Q ss_pred --CC-CCCCEEECCCCCCCCEECCC-CEEEEEEEECCCCCCCCE----EEECCCHHCCCCCCCEEEEEEECCCCCEEEEE Q ss_conf --11-68616885889822326488-808999900279566560----78076135066668627898720898489999 Q T0582 79 --DY-PAGTYVRNPPTTSHVPGSAE-GCTIFVKLWQFDPADRTQ----FSKNMEAELGAPVEGISTSLLHEDERETVTHR 150 (222) Q Consensus 79 --~~-~~G~y~~~p~gs~H~p~s~~-Gc~~~vkl~q~~~~d~~~----v~idt~~~~~~~~~Gv~~~~L~~~~~e~v~L~ 150 (222) .. ++|++++.|+|..|...... .+++++-+....+.+... ...+..+ .....+|... .++..+...+.++ T Consensus 73 ~~~~~~~gd~~~~P~~~~H~~~N~~~e~~~~~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~~~ 150 (243) T 3h7j_A 73 TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIKRLKADETYTSPEDYFLDIFK-TRDLLPGMEV-TFFVEDWVEIMLA 150 (243) T ss_dssp EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEEECCTTCCCCCCTTSEECCEE-CSCSBTTBCE-EEEEETTEEEEEE T ss_pred EEEEEECCEEEECCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEECCC-CCCCCCCCCC-EEECCCCEEEEEE T ss_conf 9999839739986899937818689960999999702477556777651451241-1122558741-0003883599999 Q ss_pred EECC-CCCCCCCCCCCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEE-CCCCCEEEEE-ECCC Q ss_conf 9688-97447769886799-998778982--893--21686179818998022488-8988299998-3685 Q T0582 151 KLEP-GANLTSEAAGGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATA-GARGAKIWMK-TGHL 214 (222) Q Consensus 151 r~~p-G~~~p~h~h~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a-~~~Gc~i~vK-TGHL 214 (222) .++| |+.+|.|.|.++|+ |||+|++.. ++. .+.+||+++.|++..|+... +.+.|.++.- +-.. T Consensus 151 ~i~~~G~~~p~H~H~~~e~~~vl~G~~~~~v~g~~~~l~~Gd~~~ip~~~~H~~~N~~~e~~~~l~i~~Pp~ 222 (243) T 3h7j_A 151 KIPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPPR 222 (243) T ss_dssp EECTTTEEEEEECCSSEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESCS T ss_pred EECCCCCCCCCEECCCCEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCCCEEEEEEECCCC T ss_conf 988997658878488849999996869999999999967998999899994873918999999999989997 No 11 >1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein structure initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11 Probab=99.70 E-value=3.6e-15 Score=106.57 Aligned_cols=198 Identities=15% Similarity=0.094 Sum_probs=127.4 Q ss_pred EEEEECCCCCCEECCC-CCEEEEEEECC--CCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE--CCCC--CCCC Q ss_conf 1677056466331588-95579995026--88705799999956898578887776469999877887--2786--1168 Q T0582 10 PVVIDTDQLEWRPSPM-KGVERRMLDRI--GGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--DEHG--DYPA 82 (222) Q Consensus 10 ~~~v~~~~~~W~~~p~-~Gv~~~~L~~~--~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~--d~~~--~~~~ 82 (222) -++|-++..-|...|. .+.....|-+- +....-...+++++||+..+ .|...+.+|||+|... .++. ...+ T Consensus 15 ~a~itP~~~V~s~~P~w~~~~~~~l~~P~~g~~~~F~~~~v~~~pG~~~~--~~~~E~~~~Vl~G~~~~~~~g~~~~l~~ 92 (246) T 1sfn_A 15 HAVITPETFVRTALAEWPGSAIVLHIAPVVGLGARFVQFTAEMPAGAQAT--ESVYQRFAFVLSGEVDVAVGGETRTLRE 92 (246) T ss_dssp EEEECGGGCCCBCCTTSTTCEEEEEECTTSTTCCSSEEEEEEECTTCEEE--CCSSEEEEEEEEEEEEEECSSCEEEECT T ss_pred EEEECCCCCEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCC--CCCCCEEEEEEECEEEEEECCEEEEEEC T ss_conf 58899734476489998786899996588788864699999979999898--8886568999959899999999999708 Q ss_pred CCEEECCCCCCCCEECCC--CEEEEEEEECCCCCCCC--EEEECCCHHCCCCC---CCEEEEEEECC---CCCEEEEEEE Q ss_conf 616885889822326488--80899990027956656--07807613506666---86278987208---9848999996 Q T0582 83 GTYVRNPPTTSHVPGSAE--GCTIFVKLWQFDPADRT--QFSKNMEAELGAPV---EGISTSLLHED---ERETVTHRKL 152 (222) Q Consensus 83 G~y~~~p~gs~H~p~s~~--Gc~~~vkl~q~~~~d~~--~v~idt~~~~~~~~---~Gv~~~~L~~~---~~e~v~L~r~ 152 (222) |+|++.|+|..|...+.. -..+++|..+-.+.... .+..+..+..+.+. .++....+... ..-.+.++.+ T Consensus 93 G~~~~~P~g~~h~~~n~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~e~~~~~~~g~~~~~~r~~~p~~~~~~~~~~~~~~ 172 (246) T 1sfn_A 93 YDYVYLPAGEKHMLTAKTDARVSVFEKPYQTVEGVQAPGVYWGNERENPGYPFEGDDHLIARKLLPDEPAFDFMVSTMSF 172 (246) T ss_dssp TEEEEECTTCCCEEEEEEEEEEEEEEECCCCBTTBCCCCCEEEETTTCCCEETTSCTTEEEEECSCCCTTCSEEEEEEEE T ss_pred CCEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEE T ss_conf 99999689995899968996099999731366544687424356100334477887623799713666653189999997 Q ss_pred CCCCCCCCCC-CCCEEE-EEEEEEEEE--CCCE--ECCCEEEECCCCCCEEEEECCCCCEEEE Q ss_conf 8897447769-886799-998778982--8932--1686179818998022488898829999 Q T0582 153 EPGANLTSEA-AGGIEV-LVLDGDVTV--NDEV--LGRNAWLRLPEGEALSATAGARGAKIWM 209 (222) Q Consensus 153 ~pG~~~p~h~-h~GeEi-~VLeG~l~d--~~~~--~~~Gs~i~~P~g~~H~~~a~~~Gc~i~v 209 (222) +||+.++.|+ |..+|+ |||+|+... +++. ..+||+++.|++..|...+..+.-+.|| T Consensus 173 ~PG~~~~~~~~h~~ee~~~vl~G~g~~~i~~~~~~v~~GD~i~~~~~~~H~~~n~G~~~~~~l 235 (246) T 1sfn_A 173 APGASLPYAEVHYMEHGLLMLEGEGLYKLEENYYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246) T ss_dssp CTTCBCSSCBCCSSCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEE T ss_pred CCCCEECCCCCCCCEEEEEEECCEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCCCEEEE T ss_conf 677400221037753999996878999999999994699899989999885082899989999 No 12 >1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, target T1521, PSI, protein structure initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11 Probab=99.69 E-value=2.9e-15 Score=107.15 Aligned_cols=199 Identities=15% Similarity=0.125 Sum_probs=125.9 Q ss_pred EEEECCCCCCEECCCCC---EEEEEEECCCCCEEEEEEEEEECCCCCCCC-CCCCCCEE-EEEEEEEEEC--CC--CCCC Q ss_conf 67705646633158895---579995026887057999999568985788-87776469-9998778872--78--6116 Q T0582 11 VVIDTDQLEWRPSPMKG---VERRMLDRIGGEVARATSIVRYAPGSRFSA-HTHDGGEE-FIVLDGVFQD--EH--GDYP 81 (222) Q Consensus 11 ~~v~~~~~~W~~~p~~G---v~~~~L~~~~~e~g~~t~lvr~~pG~~~p~-H~H~~~ee-~~VL~G~~~d--~~--~~~~ 81 (222) ++|-++..-+ ++.|| ....+|.+-.........++.++||+.... |.|.+.|+ +|||+|...- ++ .... T Consensus 27 a~i~p~~~v~--~~~P~~~~~~~~il~sP~~G~~f~~~~~~i~pgg~~~~~~~~~~~e~~~~Vl~G~~~~~~~g~~~~l~ 104 (261) T 1rc6_A 27 ALLTPDGLVK--NIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALS 104 (261) T ss_dssp EEECGGGSCC--BCCTTEEEEEEEECCCGGGTCSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTEEEEEE T ss_pred EEECCCCCCC--CCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECEEEEEECCEEEEEC T ss_conf 8889866353--46889878289998481348836999999978972488788888289999995889999999999974 Q ss_pred CCCEEECCCCCCCCEE--CCCCEEEEE--EEECCCCCCCC-EEEECCCHHCCCCC---CCEEEEEEECCC---CCEEEEE Q ss_conf 8616885889822326--488808999--90027956656-07807613506666---862789872089---8489999 Q T0582 82 AGTYVRNPPTTSHVPG--SAEGCTIFV--KLWQFDPADRT-QFSKNMEAELGAPV---EGISTSLLHEDE---RETVTHR 150 (222) Q Consensus 82 ~G~y~~~p~gs~H~p~--s~~Gc~~~v--kl~q~~~~d~~-~v~idt~~~~~~~~---~Gv~~~~L~~~~---~e~v~L~ 150 (222) +|+|++.|+|..|+-. +++.|.+++ |..+..++... .+..+..+...... .+.....|.... .-.+.++ T Consensus 105 ~Gd~~~~p~g~~h~~~N~~~~~a~~l~i~k~y~~~~g~~p~~~~~~~~d~~~~~~~g~~~~~~~~l~p~d~~~~~~~~~~ 184 (261) T 1rc6_A 105 EGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHIL 184 (261) T ss_dssp TTEEEEECTTCCCEEEECSSSCEEEEEEEEECCCCTTCCCCCEEEEGGGSCCC-------CEEEECSCCSTTCSEEEEEE T ss_pred CCCEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEE T ss_conf 89899967999689998999988999999457566776762224643335655545554289999513565416999999 Q ss_pred EECCCCCCC-CCCCCCEEE-EEEEEEEEE--CCCE--ECCCEEEECCCCCCEEEEEC-CCCC--EEEEEE Q ss_conf 968897447-769886799-998778982--8932--16861798189980224888-9882--999983 Q T0582 151 KLEPGANLT-SEAAGGIEV-LVLDGDVTV--NDEV--LGRNAWLRLPEGEALSATAG-ARGA--KIWMKT 211 (222) Q Consensus 151 r~~pG~~~p-~h~h~GeEi-~VLeG~l~d--~~~~--~~~Gs~i~~P~g~~H~~~a~-~~Gc--~i~vKT 211 (222) .++||..++ .|+|..+|+ |||+|+... ++.. ..+||+++.|++..|...+. ++.. -+|.|. T Consensus 185 ~~~PG~~~~~~h~h~~ee~~~vl~G~g~~~~~g~~~~v~~GD~i~~~~~~ph~~~~~g~~~~~~y~~~kd 254 (261) T 1rc6_A 185 SFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKD 254 (261) T ss_dssp EECTTCCBEEEEEESSCEEEEEEESEEEEESSSCEEEEETTCEEEECSSEEEEEEEC----CEEEEEEEE T ss_pred EECCCCEEEEEEECCCEEEEEEECCEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEEC T ss_conf 9889924410260252079999687899998999999579989998999989336369997689999955 No 13 >3cjx_A Protein of unknown function with A cupin-like fold; YP_298765.1, protein with A cupin-like fold and unknown function; HET: MSE; 2.60A {Ralstonia eutropha JMP134} Probab=99.61 E-value=4.5e-15 Score=106.03 Aligned_cols=104 Identities=14% Similarity=0.137 Sum_probs=82.5 Q ss_pred CCCEEEECCCHHCCCCC----CCEEEEEEECC--CCCEEEEEEECCCCCCCCCCCCC-EEEEEEEEEEEE---CCCEECC Q ss_conf 65607807613506666----86278987208--98489999968897447769886-799998778982---8932168 Q T0582 115 DRTQFSKNMEAELGAPV----EGISTSLLHED--ERETVTHRKLEPGANLTSEAAGG-IEVLVLDGDVTV---NDEVLGR 184 (222) Q Consensus 115 d~~~v~idt~~~~~~~~----~Gv~~~~L~~~--~~e~v~L~r~~pG~~~p~h~h~G-eEi~VLeG~l~d---~~~~~~~ 184 (222) .+.-+.+|++...|.+. +|+++++|+-| .+..+.|+|++||+.+|.|.|.| +|+|||+|++.+ ++..+.+ T Consensus 7 ~~~ll~vdt~~~Pw~~~~~~~~Gv~~kpL~~d~~tG~~~~lvr~~pG~~~p~H~H~g~~~~~VL~G~~~y~e~~~~~~~a 86 (165) T 3cjx_A 7 QEKLLTVDTTAHPFLKALGGHEGTDIFPLFMDPYNGLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYTEYPGQKQTA 86 (165) T ss_dssp CCSCEEEETTSSCCBCSGGGCTTEEEEEEEEETTTTEEEEEEEECTTCBCCEEEESSCEEEEEEESEEEETTCTTSCEET T ss_pred CCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEECC T ss_conf 40279873776777527889999789883686889869999998999997588968698999995468986389818899 Q ss_pred CEEEECCCCCCEEEEEC---CCCCEEEEE-ECCCCCCC Q ss_conf 61798189980224888---988299998-36857666 Q T0582 185 NAWLRLPEGEALSATAG---ARGAKIWMK-TGHLRFVR 218 (222) Q Consensus 185 Gs~i~~P~g~~H~~~a~---~~Gc~i~vK-TGHL~~~~ 218 (222) |+|++.|+|+.|++.+. ++++.+|.- .|-+.+.- T Consensus 87 G~y~~eP~G~~Ht~~~~~d~~e~~~~lf~~~G~~~~ld 124 (165) T 3cjx_A 87 GCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNVNFT 124 (165) T ss_dssp TEEEEECTTCEECEECCTTCSSCEEEEEEEESCEEEEC T ss_pred CEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCEEEEC T ss_conf 73899798894546157888867899999446779988 No 14 >3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii} Probab=99.60 E-value=4.1e-15 Score=106.26 Aligned_cols=101 Identities=18% Similarity=0.193 Sum_probs=81.2 Q ss_pred EEECCCHHCCCCC------CCEEEEEEECC--CCCEEEEEEECCCCCCCCCCCCC-EEEEEEEEEEEECCC------EEC Q ss_conf 7807613506666------86278987208--98489999968897447769886-799998778982893------216 Q T0582 119 FSKNMEAELGAPV------EGISTSLLHED--ERETVTHRKLEPGANLTSEAAGG-IEVLVLDGDVTVNDE------VLG 183 (222) Q Consensus 119 v~idt~~~~~~~~------~Gv~~~~L~~~--~~e~v~L~r~~pG~~~p~h~h~G-eEi~VLeG~l~d~~~------~~~ 183 (222) .-|++++..|.+. +|++.++|+.| .+..+.|+|++||+.+|.|.|.+ +|+|||+|++.++.+ .+. T Consensus 12 ~~v~~dd~~W~P~p~~~~~~Gv~~k~L~~d~e~G~~~~llr~~~G~~~p~H~H~~~e~~~Vl~G~~~~~~g~~~~~~~~~ 91 (153) T 3bal_A 12 EYVKISDNNYVPFPEAFSDGGITWQLLHSSPETSSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRGGEQEGGSTAY 91 (153) T ss_dssp EEEECCGGGCEECCGGGEESCCEEEEEEEETTTTEEEEEEEECTTEEECCEEESSCEEEEEEESEEEETTCGGGTSEEEE T ss_pred HEECCCCCCCEECCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEE T ss_conf 56846578625188666789859999747787773999999789964588877636699998458998267657884760 Q ss_pred CCEEEECCCCCCEEEEECCCCCEEEEE-ECCCCCCCC Q ss_conf 861798189980224888988299998-368576667 Q T0582 184 RNAWLRLPEGEALSATAGARGAKIWMK-TGHLRFVRT 219 (222) Q Consensus 184 ~Gs~i~~P~g~~H~~~a~~~Gc~i~vK-TGHL~~~~~ 219 (222) +|+|++.|+|+.|++.+.+++|.+++. +|.+.++-. T Consensus 92 aG~y~~ePaG~~H~~~~~~e~t~~l~~~~Gp~~~~d~ 128 (153) T 3bal_A 92 APSYGFESSGALHGKTFFPVESQFYMTFLGPLNFIDD 128 (153) T ss_dssp SSEEEEECTTCEESCCEESSCEEEEEEEESCEEEECT T ss_pred CCEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEECC T ss_conf 3638983899965653189984999997167156789 No 15 >2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha subunit; ZP_00243239.1, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum PM1} SCOP: b.82.1.21 Probab=99.59 E-value=2.5e-15 Score=107.48 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=81.2 Q ss_pred EEECCCHHCCCCC------CCEEEEEEECC--CCCEEEEEEECCCCCCCCCCCCC-EEEEEEEEEEEECCCEEC------ Q ss_conf 7807613506666------86278987208--98489999968897447769886-799998778982893216------ Q T0582 119 FSKNMEAELGAPV------EGISTSLLHED--ERETVTHRKLEPGANLTSEAAGG-IEVLVLDGDVTVNDEVLG------ 183 (222) Q Consensus 119 v~idt~~~~~~~~------~Gv~~~~L~~~--~~e~v~L~r~~pG~~~p~h~h~G-eEi~VLeG~l~d~~~~~~------ 183 (222) .-+|+++..|.+. +|++.++|.-| .+..+.|+|++||+.+|.|.|.+ +|+|||+|++.++++.+. T Consensus 10 ~~v~~dd~~W~P~~~~~~~~G~~~k~L~~d~~~G~~~~l~r~~~G~~~p~H~H~~~e~~~VL~G~~~~~~g~~~~g~~~~ 89 (145) T 2o1q_A 10 EYVQMDQVDWKPFPAAFSTGGIRWKLLHVSPEMGSWTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRGGKAAGGDTAI 89 (145) T ss_dssp CCCCGGGSCCEECCGGGEESCCEEEEEEEETTTTEEEEEEEECTTEEECCEEESSCEEEEEEEEEEEETTCGGGTSEEEE T ss_pred CEECCCCCCCEECCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEE T ss_conf 08977788556788766889869998655788873999999788979488812218999999669992678757885773 Q ss_pred CCEEEECCCCCCEEEEECCCCCEEEEE-ECCCCCCC Q ss_conf 861798189980224888988299998-36857666 Q T0582 184 RNAWLRLPEGEALSATAGARGAKIWMK-TGHLRFVR 218 (222) Q Consensus 184 ~Gs~i~~P~g~~H~~~a~~~Gc~i~vK-TGHL~~~~ 218 (222) +|+|++.|+|+.|.+.+++++|.+++- .|-+.++- T Consensus 90 ~G~y~~~PaG~~H~~~~~~e~~~~~~~~~Gp~~~ld 125 (145) T 2o1q_A 90 APGYGYESANARHDKTEFPVASEFYMSFLGPLTFVK 125 (145) T ss_dssp SSEEEEECTTCEESCCEEEEEEEEEEEEESCEEEEC T ss_pred CCCEEEECCCCEECCCCCCCCEEEEEEEECCEEEEC T ss_conf 781788479985865308988799999968838988 No 16 >1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protein structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11 Probab=99.58 E-value=1e-13 Score=98.11 Aligned_cols=169 Identities=17% Similarity=0.213 Sum_probs=110.9 Q ss_pred EEEEEEECCCCCC--CCCCCCCCEEEEEEEEEEE--CCCC--CCCCCCEEECCCCCCCCEE--CCCCEEEEEEEECCCCC Q ss_conf 9999995689857--8887776469999877887--2786--1168616885889822326--48880899990027956 Q T0582 43 ATSIVRYAPGSRF--SAHTHDGGEEFIVLDGVFQ--DEHG--DYPAGTYVRNPPTTSHVPG--SAEGCTIFVKLWQFDPA 114 (222) Q Consensus 43 ~t~lvr~~pG~~~--p~H~H~~~ee~~VL~G~~~--d~~~--~~~~G~y~~~p~gs~H~p~--s~~Gc~~~vkl~q~~~~ 114 (222) .-.++.++||+.. |.|.|...|.+|||+|... .+.. ...+|+|++.|+|..|.-. +++.|.+++....+.+. T Consensus 69 ~~y~v~i~Pgg~~~~p~~~~~~E~~~~Vl~G~~~~~~~g~~~~l~~Gd~~~~p~g~~h~~~N~~~~~~~~~~i~~~~~~~ 148 (278) T 1sq4_A 69 SQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIRKHYQKV 148 (278) T ss_dssp EEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSCEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEEECCCC T ss_pred EEEEEEECCCCCCCCCCCCCCCEEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCC T ss_conf 79999997898567777888858999999798999999999992599999979999589897899989999998456555 Q ss_pred C----CCEEEECCCHHCCCCC---CCEEEEE--EE-CC--CCCEEEEEEECCCCCCC-CCCCCCEEE-EEEEEEEEE--C Q ss_conf 6----5607807613506666---8627898--72-08--98489999968897447-769886799-998778982--8 Q T0582 115 D----RTQFSKNMEAELGAPV---EGISTSL--LH-ED--ERETVTHRKLEPGANLT-SEAAGGIEV-LVLDGDVTV--N 178 (222) Q Consensus 115 d----~~~v~idt~~~~~~~~---~Gv~~~~--L~-~~--~~e~v~L~r~~pG~~~p-~h~h~GeEi-~VLeG~l~d--~ 178 (222) + ..++..+.++..+... .+..... +. .+ ..-.+.++.++||+..+ .|+|..+|+ |||+|+... + T Consensus 149 ~g~~~~~~~v~~~~d~~p~~~~~~~~~~~~~r~~~p~~~~~d~~~~i~~~~PG~~~~~~h~H~~ee~~~vL~G~g~~~~~ 228 (278) T 1sq4_A 149 DGVPLPEAFVTNEQDIQPLVMPDTEGRWSTTRFVDMSDMRHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLN 228 (278) T ss_dssp TTCCCCCCEEEEGGGSCCEECSSGGGCEEEECSSCTTCTTCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEET T ss_pred CCCCCCCCEECCHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEECCCCCCCCEEEEEEECCEEEEEEC T ss_conf 54566532667776578443677785167887224445565524799997689604141426752699996467999999 Q ss_pred CCE--ECCCEEEECCCCCCEEEEECCCCCE--EEEEE Q ss_conf 932--1686179818998022488898829--99983 Q T0582 179 DEV--LGRNAWLRLPEGEALSATAGARGAK--IWMKT 211 (222) Q Consensus 179 ~~~--~~~Gs~i~~P~g~~H~~~a~~~Gc~--i~vKT 211 (222) +.. +.+||+++.|++..|...+..+.-+ |+.|. T Consensus 229 g~~~~v~~GD~i~~~~~~~h~~~n~G~~~~~yl~~kd 265 (278) T 1sq4_A 229 QDWVEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKD 265 (278) T ss_dssp TEEEEEETTCEEEEEESCCEEEECCSSSCEEEEEEEE T ss_pred CEEEEECCCCEEEECCCCCEEEECCCCCCEEEEEEEE T ss_conf 9999946998999899997861817998889999986 No 17 >1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A* Probab=99.53 E-value=2e-12 Score=90.57 Aligned_cols=199 Identities=15% Similarity=0.170 Sum_probs=116.5 Q ss_pred EEEEECCCCCCEECCCCCEEEEEEECCCCCE-EE-EEEEEEECCCCCCCCCCCCCC-EEEEEEEEEEEC--CC--CCCCC Q ss_conf 1677056466331588955799950268870-57-999999568985788877764-699998778872--78--61168 Q T0582 10 PVVIDTDQLEWRPSPMKGVERRMLDRIGGEV-AR-ATSIVRYAPGSRFSAHTHDGG-EEFIVLDGVFQD--EH--GDYPA 82 (222) Q Consensus 10 ~~~v~~~~~~W~~~p~~Gv~~~~L~~~~~e~-g~-~t~lvr~~pG~~~p~H~H~~~-ee~~VL~G~~~d--~~--~~~~~ 82 (222) ..++..++..=.. .+|.....+.+ +.++ +. ....+.++||...|.|.|... |-+|||+|.+.- ++ -.+.+ T Consensus 15 p~~i~~~eg~~~~--~~g~~~~~~~~-~~~t~~~~~~~~~~~~pg~~~~~h~H~~~~E~~~Vl~G~~~~~~~~~~~~l~~ 91 (337) T 1y3t_A 15 PYLLRSGEGERYL--FGRQVATVMAN-GRSTGDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGERYLLIS 91 (337) T ss_dssp CEEECTTCSEEEE--ETTEEEEEEEC-HHHHTSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETTEEEEECT T ss_pred CEEECCCCCEEEE--ECCCEEEEEEC-CCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEECC T ss_conf 8897489821899--78944899975-56789837999999899998986567885279999972899997989999738 Q ss_pred CCEEECCCCCCCCEEC-CCCEEEE-EEEEC-C--------------C--CCCCC-------------EEEE--------- Q ss_conf 6168858898223264-8880899-99002-7--------------9--56656-------------0780--------- Q T0582 83 GTYVRNPPTTSHVPGS-AEGCTIF-VKLWQ-F--------------D--PADRT-------------QFSK--------- 121 (222) Q Consensus 83 G~y~~~p~gs~H~p~s-~~Gc~~~-vkl~q-~--------------~--~~d~~-------------~v~i--------- 121 (222) |++++.|+|..|.-.. .+.+.++ +-.-. | . ..+.. .... T Consensus 92 Gd~~~~p~~~~H~~~n~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (337) T 1y3t_A 92 GDYANIPAGTPHSYRMQSHRTRLVSYTMKGNVAHLYSVIGNPYDHAEHPPYASEEVSNERFAEAAAVATIVFLDEAKPAC 171 (337) T ss_dssp TCEEEECTTCCEEEEECSTTEEEEEEEETTSSTHHHHHHSEECSCSSCCSSCCCCCTTCTTGGGTSSCEECCCCCCCSSC T ss_pred CCEEEECCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 98899589994899994898489999679878897676500023356766566432210123364333433566666665 Q ss_pred -------------------CCCHHCCCCCCCEEEEEEE----CCCCCEEEEEEECCCCCCCCCCCCC-EEE-EEEEEEEE Q ss_conf -------------------7613506666862789872----0898489999968897447769886-799-99877898 Q T0582 122 -------------------NMEAELGAPVEGISTSLLH----EDERETVTHRKLEPGANLTSEAAGG-IEV-LVLDGDVT 176 (222) Q Consensus 122 -------------------dt~~~~~~~~~Gv~~~~L~----~~~~e~v~L~r~~pG~~~p~h~h~G-eEi-~VLeG~l~ 176 (222) ......+....|....++- .+..-.+..++++||...+.|.|.. .|+ ||++|++. T Consensus 172 ~~~~~~~~~~p~~~~~~~l~~~~g~~~~~~g~~~~~~~~~~~t~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~vl~G~~~ 251 (337) T 1y3t_A 172 SAKLAELTELPDGAVPYVLESGEGDRLLTGDQLHRIVAAQKNTDGQFIVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMT 251 (337) T ss_dssp SCEECCBCSCCSSSCCEEECTTCSEEEEETTEEEEEEECGGGTTTSCEEEEEEECSCCCCCCEECSSCEEEEEEEESCEE T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCEEECCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEE T ss_conf 45553123588655531441466753504783699636886668717999999799988887575885389999905899 Q ss_pred E--CCC--EECCCEEEECCCCCCEEEEECCCCCEEEEEE Q ss_conf 2--893--2168617981899802248889882999983 Q T0582 177 V--NDE--VLGRNAWLRLPEGEALSATAGARGAKIWMKT 211 (222) Q Consensus 177 d--~~~--~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vKT 211 (222) . ++. .+.+||++..|+|..|+.....+.+.+++-. T Consensus 252 ~~~~~~~~~~~~Gd~~~vP~g~~H~~~~~~~~~~~l~~~ 290 (337) T 1y3t_A 252 MWTDGQEIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVL 290 (337) T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECSSSEEEEEEE T ss_pred EEECCEEEEECCCCEEEECCCCCEEEEECCCCEEEEEEE T ss_conf 999999999279988998979947869589984999998 No 18 >3ebr_A Uncharacterized RMLC-like cupin; YP_294607.1, RMLC-like cupin with unknown function, structural genomics; 2.60A {Ralstonia eutropha JMP134} Probab=99.47 E-value=1.6e-13 Score=96.96 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=79.1 Q ss_pred EEEECCCHHCCCC----CCCEEEEEEECC--CCCEEEEEEECCCCCCCCCCCCCE-EEEEEEEEEEEC--CCEECCCEEE Q ss_conf 0780761350666----686278987208--984899999688974477698867-999987789828--9321686179 Q T0582 118 QFSKNMEAELGAP----VEGISTSLLHED--ERETVTHRKLEPGANLTSEAAGGI-EVLVLDGDVTVN--DEVLGRNAWL 188 (222) Q Consensus 118 ~v~idt~~~~~~~----~~Gv~~~~L~~~--~~e~v~L~r~~pG~~~p~h~h~Ge-Ei~VLeG~l~d~--~~~~~~Gs~i 188 (222) ...+|+++..|.+ .+|++.++|.-| .+..+.|+|++||+.+|.|.|.+. ++|||+|++.+. +.++.+|+|+ T Consensus 9 ~~~id~~d~pW~p~~~~~~G~~~k~L~~d~~~G~~~~l~r~~~G~~~p~H~H~~~~~~~vl~G~~~~~~~~~~~~~G~~~ 88 (159) T 3ebr_A 9 TGCLDGNDTPWMPFAPYSNDVMVKYFKIDPVRGETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYKEHDWVAHAGSVV 88 (159) T ss_dssp CCCCCGGGSCCEECTTTCSSSEEEEEEEETTTTEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEETTSSCCBCTTCEE T ss_pred CCEECCCCCCCEECCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEECCCEEE T ss_conf 14167567866548999998299996787889839999999999896886878885899997699985798877088699 Q ss_pred ECCCCCCEEEEEC-CCC--CEEE-EEECCCCCC Q ss_conf 8189980224888-988--2999-983685766 Q T0582 189 RLPEGEALSATAG-ARG--AKIW-MKTGHLRFV 217 (222) Q Consensus 189 ~~P~g~~H~~~a~-~~G--c~i~-vKTGHL~~~ 217 (222) +.|+|+.|++.+. .++ |++| +-.|.+.+. T Consensus 89 ~~P~G~~H~~~~~~~e~~~~i~~~~~~G~~~fl 121 (159) T 3ebr_A 89 YETASTRHTPQSAYAEGPDIITFNIVAGELLYL 121 (159) T ss_dssp EECSSEEECEEESSSSSSCEEEEEEEESCEEEE T ss_pred EECCCCCCCCCCCCCCCCCEEEEEECCCCEEEE T ss_conf 869998106755689983099999727767999 No 19 >2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal-kingston bacterial structural genomics initiative; 2.41A {Escherichia coli O157} SCOP: b.82.1.23 Probab=99.37 E-value=3.2e-11 Score=83.45 Aligned_cols=167 Identities=11% Similarity=0.143 Sum_probs=112.7 Q ss_pred EEEEEEECCCCCCCCCCCCCCEEEEEEEEEE--ECCC---CCCCCCCEEECCCCCCCCEE--CCCCEEEEEEEEC----- Q ss_conf 9999995689857888777646999987788--7278---61168616885889822326--4888089999002----- Q T0582 43 ATSIVRYAPGSRFSAHTHDGGEEFIVLDGVF--QDEH---GDYPAGTYVRNPPTTSHVPG--SAEGCTIFVKLWQ----- 110 (222) Q Consensus 43 ~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~--~d~~---~~~~~G~y~~~p~gs~H~p~--s~~Gc~~~vkl~q----- 110 (222) +..+..+.||...|.|+|...|..|||+|.- ..-+ -.+.+||++..|+|..|.-. +++.|.++.-+-. T Consensus 101 ~a~~~~l~PGe~~~~H~H~~~~~~~vl~G~g~~t~v~~~~~~~~~GD~~~~P~~~~H~~~n~~d~~~~~l~~~d~pl~~~ 180 (354) T 2d40_A 101 YAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLDLPLVNI 180 (354) T ss_dssp EEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEECHHHHHH T ss_pred HHHEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEECCEEEEEECCCEEECCCCCEEEEEECCCCCEEEEEECCCCHHHC T ss_conf 32108978998577044766136899989448998889788850899898189974886827998789999407753530 Q ss_pred --------CCCCCCCEEEECCC--------------------------------H--------HCCCCCCCEEEEEEECC Q ss_conf --------79566560780761--------------------------------3--------50666686278987208 Q T0582 111 --------FDPADRTQFSKNME--------------------------------A--------ELGAPVEGISTSLLHED 142 (222) Q Consensus 111 --------~~~~d~~~v~idt~--------------------------------~--------~~~~~~~Gv~~~~L~~~ 142 (222) ++ .+..++..... . .......|+.+..+... T Consensus 181 l~~~f~e~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~sp~~~y~~~~t~~aL~~~~~~~e~~~~~g~~~~y~np~ 259 (354) T 2d40_A 181 LGCGFAEDYP-EEQQPVTRKEGDYLPRYAANMLPLRHQTGNSSPIFNYRYDRSREVLHDLTRLGDADEWDGYKMRYVNPV 259 (354) T ss_dssp HTCCCEEECC---CCCCCSCTTTHHHHHSSSEECSSCCCCSSCSCCEECHHHHHHHHHHHHTTSCCBTTTBEEEEECCTT T ss_pred CCCCEECCCC-CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCH T ss_conf 2532002465-335654577431144404776541113566674434663016787888874267776786147774431 Q ss_pred ------CCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE--ECCC--EECCCEEEECCCCCCEEEEECCCCCEEEEEE Q ss_conf ------98489999968897447769886799-99877898--2893--2168617981899802248889882999983 Q T0582 143 ------ERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VNDE--VLGRNAWLRLPEGEALSATAGARGAKIWMKT 211 (222) Q Consensus 143 ------~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~--d~~~--~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vKT 211 (222) ..-...+++++||.....|.|...++ +|++|+.+ .++. .+.+||.+..|++..|+..+.+ ++.+|.-+ T Consensus 260 ~g~~~~~t~~~~~~~L~pG~~~~~Hrht~~~v~~vleG~g~~~v~~~~~~w~~GDvf~vP~w~~h~~~~~~-d~~Lf~i~ 338 (354) T 2d40_A 260 TGGYPMPSMGAFLQLLPKGFASRVARTTDSTIYHVVEGSGQVIIGNETFSFSAKDIFVVPTWHGVSFQTTQ-DSVLFSFS 338 (354) T ss_dssp TSSCSSSSCEEEEEEECTTCBCCCBEESSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEEEEE-EEEEEEEE T ss_pred HCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEEECCCCEEEECCCCEEEEEECC-CEEEEEEE T ss_conf 12667772067889717976357746777289999979689999999999728998993989759887089-84899984 No 20 >2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} Probab=99.35 E-value=6.5e-11 Score=81.69 Aligned_cols=171 Identities=20% Similarity=0.184 Sum_probs=111.1 Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCC-CEEEEEEEEEE----ECCCC-----CCCCCCEEECCCCCCCCEEC--CCCEEEE Q ss_conf 8705799999956898578887776-46999987788----72786-----11686168858898223264--8880899 Q T0582 38 GEVARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVF----QDEHG-----DYPAGTYVRNPPTTSHVPGS--AEGCTIF 105 (222) Q Consensus 38 ~e~g~~t~lvr~~pG~~~p~H~H~~-~ee~~VL~G~~----~d~~~-----~~~~G~y~~~p~gs~H~p~s--~~Gc~~~ 105 (222) ..++-+...+|++||+..+.|.|+. .|-+|||+|.. .++++ ++.+|+.++.|+|+.|.-.. ++.|.++ T Consensus 48 ~~~~~a~~~~~l~pG~~~~~H~H~~a~E~~~Vl~G~~~vt~v~~~g~~~~~~l~~GDv~~iP~G~~h~~~N~g~~~~~~l 127 (361) T 2vqa_A 48 VSKGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFL 127 (361) T ss_dssp TCCSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEE T ss_pred CCCCEEEEEEEECCCCCCCCEECCCCCEEEEEEEEEEEEEEEEECCEEEEEEEECCCEEEECCCCEEEEEECCCCCEEEE T ss_conf 65521579999889963586088998759999957899999996999999998079789989998699993799976999 Q ss_pred EEEEC-----------------CCCC------------------CCCEE--------EECCCHHCC--C----------- Q ss_conf 99002-----------------7956------------------65607--------807613506--6----------- Q T0582 106 VKLWQ-----------------FDPA------------------DRTQF--------SKNMEAELG--A----------- 129 (222) Q Consensus 106 vkl~q-----------------~~~~------------------d~~~v--------~idt~~~~~--~----------- 129 (222) .-+-- |+.+ .+..+ .++.....+ . T Consensus 128 ~vf~~~~~~~~~~f~~~~~~~~~p~~vLa~af~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (361) T 2vqa_A 128 LVFNDGTFSEGATFSVTDWLSHTPIAWVEENLGWTAAQVAQLPKKQVYISSYGPASGPLASATPQGQTAKIEVPHTHNLL 207 (361) T ss_dssp EEESSTTCCTTSSEEHHHHHHTSCHHHHHHHHTCCHHHHTTSCSSCCCEECSSCCCCCGGGCCCSSCCCBCCSCCEEECT T ss_pred EEECCCCCCCCCEEECCHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEECC T ss_conf 99679986754204102022049988998760999899874300133345466687521211556666777666520110 Q ss_pred ---C---CCCEEEEEEECC-----CCCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEEE----CC-----CEECCCEE Q ss_conf ---6---686278987208-----984899999688974477698-86799-998778982----89-----32168617 Q T0582 130 ---P---VEGISTSLLHED-----ERETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV----ND-----EVLGRNAW 187 (222) Q Consensus 130 ---~---~~Gv~~~~L~~~-----~~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d----~~-----~~~~~Gs~ 187 (222) + ..|-++..+... ..-.+.++.++||+..+.|.| ..+|+ |||+|+... .. ..+.+||. T Consensus 208 ~~~p~~~~~gG~~~~~~~~~fp~l~~is~~~v~l~pG~~~~pH~H~~a~E~~yVl~G~~~~~v~~~~~~~~t~~l~~Gdv 287 (361) T 2vqa_A 208 GQQPLVSLGGNELRLASAKEFPGSFNMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDV 287 (361) T ss_dssp TSCCSEEETTEEEEEECTTTCTTSTTCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCE T ss_pred CCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCEEEEEEECCCCE T ss_conf 26997368872799977321755346525999977884138869899889999992679999984376578999449978 Q ss_pred EECCCCCCEEEEE-CCCCCEEE Q ss_conf 9818998022488-89882999 Q T0582 188 LRLPEGEALSATA-GARGAKIW 208 (222) Q Consensus 188 i~~P~g~~H~~~a-~~~Gc~i~ 208 (222) +..|.|..|.... +.+.+.++ T Consensus 288 ~~iP~g~~H~~~N~g~e~~~~l 309 (361) T 2vqa_A 288 GYVPKGYGHAIRNSSQKPLDIV 309 (361) T ss_dssp EEECTTCEEEEECCSSSCEEEE T ss_pred EEECCCCEEEEEECCCCCEEEE T ss_conf 9989997699995799988999 No 21 >1juh_A Quercetin 2,3-dioxygenase; copper, cupin, glycoprotein, beta sandwich, oxidoreductase; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A* Probab=99.32 E-value=2.4e-10 Score=78.37 Aligned_cols=202 Identities=16% Similarity=0.120 Sum_probs=108.1 Q ss_pred CCEEEEECCCCCCEECCCCCEEEEEEECCCCCE-EEE-EEEEEECCCCC--CCCCCCCCC-EEEEEEEEEEE----CCC- Q ss_conf 841677056466331588955799950268870-579-99999568985--788877764-69999877887----278- Q T0582 8 TKPVVIDTDQLEWRPSPMKGVERRMLDRIGGEV-ARA-TSIVRYAPGSR--FSAHTHDGG-EEFIVLDGVFQ----DEH- 77 (222) Q Consensus 8 ~~~~~v~~~~~~W~~~p~~Gv~~~~L~~~~~e~-g~~-t~lvr~~pG~~--~p~H~H~~~-ee~~VL~G~~~----d~~- 77 (222) .++.++...+....-....++-|.++. +.++ |.+ ...++.+||.. .|.|.|... |-+|||+|.+. +++ T Consensus 14 ~~p~vl~~~~~~~~~~~g~~~~r~~~~--~~~t~g~~~~~~~~~~~g~~~g~~~H~H~~~~E~~~vl~G~~~~~~~~~~~ 91 (350) T 1juh_A 14 VRPYVIRHYSHARAVTVDTQLYRFYVT--GPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNE 91 (350) T ss_dssp CCCEEECTTCCTTCEEETTEEEEEEEC--HHHHTTSCEEEEEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTS T ss_pred CCCEEECCCCCCEEEECCCCEEEEEEC--CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCC T ss_conf 788786578875278628867999971--566897189999961788888887616477638999997589999953789 Q ss_pred ----CCCCCCCEEECCCCCCCCEE-CCCCEEEE-EEEE-CC--------------------CCCC--------------- Q ss_conf ----61168616885889822326-48880899-9900-27--------------------9566--------------- Q T0582 78 ----GDYPAGTYVRNPPTTSHVPG-SAEGCTIF-VKLW-QF--------------------DPAD--------------- 115 (222) Q Consensus 78 ----~~~~~G~y~~~p~gs~H~p~-s~~Gc~~~-vkl~-q~--------------------~~~d--------------- 115 (222) -+..+|++++.|+|..|.-. ..++|-++ +-.- .| +..+ T Consensus 92 ~~~~~~l~~GD~~~~P~g~~H~~~n~~~~~~~l~v~~pg~~e~~f~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 171 (350) T 1juh_A 92 TQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPSSSDSSSTTGPDSSTIST 171 (350) T ss_dssp CCEEEEEETTCEEEECTTEEEEEEECSTTEEEEEEEESSCTTHHHHHHSEECCCTTCCSSCCC--------------CGG T ss_pred CEEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHC T ss_conf 73899968998899699975885866998238999878747887775087212057776566334443224454445420 Q ss_pred --CCEEEEC-----------CCH---HCCC---------------------------CCCCEEEEEEECC----C---CC Q ss_conf --5607807-----------613---5066---------------------------6686278987208----9---84 Q T0582 116 --RTQFSKN-----------MEA---ELGA---------------------------PVEGISTSLLHED----E---RE 145 (222) Q Consensus 116 --~~~v~id-----------t~~---~~~~---------------------------~~~Gv~~~~L~~~----~---~e 145 (222) +..+... ... ..|. ..++.-..++..+ + .. T Consensus 172 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 251 (350) T 1juh_A 172 LQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTL 251 (350) T ss_dssp GGGGTCEECTTCCCCCCCBTTEESSSSCSSSSCCCCCSSTTCCEEECTTCSCEEEECTTSCEEEEEEECHHHHGGGCEEE T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCE T ss_conf 23454020146787732235656554445455434565568854895366511002568824760003553568744412 Q ss_pred EEEEEEECCCCC-CCCCCCCCEEE-EEEEEEEEE--CC---CEECCCEEEECCCCCCEEEEECCCCCEEEEEE Q ss_conf 899999688974-47769886799-998778982--89---32168617981899802248889882999983 Q T0582 146 TVTHRKLEPGAN-LTSEAAGGIEV-LVLDGDVTV--ND---EVLGRNAWLRLPEGEALSATAGARGAKIWMKT 211 (222) Q Consensus 146 ~v~L~r~~pG~~-~p~h~h~GeEi-~VLeG~l~d--~~---~~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vKT 211 (222) .+..+.+.|+.. .+.|+|..+|+ |||+|++.. ++ -.+.+||.+..|+|..|+......-+.++.-+ T Consensus 252 ~~~~~~~~p~~~~~~~~~~~~~e~~~vl~G~~~~~~~~~~~~~l~~GD~~~iP~g~~h~~~~~~~~~~~~~~~ 324 (350) T 1juh_A 252 STISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVS 324 (350) T ss_dssp EEEEECCCCTTSCCCCBCCSSCEEEEEEESCEEEEETTSCCEEECTTCEEEECTTCCEEEEESSSSEEEEEEE T ss_pred EEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEECCCCEEEECCCCEEEECCCCCEEEEECCCCEEEEEEE T ss_conf 4899985278888874168655899998473999965763688679998998999988868479860699997 No 22 >1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal binding protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A Probab=99.32 E-value=9.9e-11 Score=80.61 Aligned_cols=170 Identities=18% Similarity=0.157 Sum_probs=112.3 Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE----CCCC-----CCCCCCEEECCCCCCCCEE-CCCCEEEEEEEE Q ss_conf 05799999956898578887776469999877887----2786-----1168616885889822326-488808999900 Q T0582 40 VARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ----DEHG-----DYPAGTYVRNPPTTSHVPG-SAEGCTIFVKLW 109 (222) Q Consensus 40 ~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~----d~~~-----~~~~G~y~~~p~gs~H~p~-s~~Gc~~~vkl~ 109 (222) ++-+-.-+|+.||+..+.|.|+..|..|||+|... |.++ +..+|++++.|+|+.|.-. .++||-+++-.- T Consensus 77 ~~~a~~~~~L~pga~~~pHwH~~ae~~yVl~G~~~vt~Vd~~g~~~~~~l~~GDv~~~P~G~~H~i~n~~dg~e~llvf~ 156 (385) T 1j58_A 77 ENLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVFD 156 (385) T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEEEEEEEEEES T ss_pred HHHHHEEEEECCCCCCCCCCCCCCCEEEEEECEEEEEEEECCCCEEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEEC T ss_conf 11101378976996748616363037999958799999908994899885368789989997699972699968999976 Q ss_pred C--CCC----------------------------------CCCCEEE------------ECCCHH------------CCC Q ss_conf 2--795----------------------------------6656078------------076135------------066 Q T0582 110 Q--FDP----------------------------------ADRTQFS------------KNMEAE------------LGA 129 (222) Q Consensus 110 q--~~~----------------------------------~d~~~v~------------idt~~~------------~~~ 129 (222) - |.. .++-... ...... ... T Consensus 157 ~~~~~~~~tf~~~~~l~~~p~eVLa~aF~v~~~~~~~i~~~q~~i~~~~~p~~~~~~~~~~~~g~~~~~~~~~l~~~~P~ 236 (385) T 1j58_A 157 DGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPI 236 (385) T ss_dssp CTTCCGGGEEEHHHHHHTSCHHHHHHHHTCCTGGGTTSCSSCCSEECCCCCCCHHHHCCCCTTCCCSSCSEEEGGGSCCE T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCCCC T ss_conf 88866554201022323498379887729998998624301234345678875301004687888876625613457884 Q ss_pred CCCCEEEEEEECC-----CCCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEEE----CC-----CEECCCEEEECCCC Q ss_conf 6686278987208-----984899999688974477698-86799-998778982----89-----32168617981899 Q T0582 130 PVEGISTSLLHED-----ERETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV----ND-----EVLGRNAWLRLPEG 193 (222) Q Consensus 130 ~~~Gv~~~~L~~~-----~~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d----~~-----~~~~~Gs~i~~P~g 193 (222) ...|=++..+... .+-.+.++.++||+..+.|.| ..+|+ ||++|+... .+ ..+.+||.+..|.| T Consensus 237 ~~~gG~v~~~d~~~fP~l~~ls~~~v~l~PG~~~~pH~Hp~a~E~~yv~~G~~~v~v~~~~g~~~t~~l~~GDv~vvP~g 316 (385) T 1j58_A 237 ESEGGKVYIADSTNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFA 316 (385) T ss_dssp ECSSEEEEEESTTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTT T ss_pred CCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEEECCCCEEEEEECCCCEEEECCC T ss_conf 46880399955554655123326889865874148977989768999997969999990799379998448968998999 Q ss_pred CCEEEEE-CCCCCEEEE Q ss_conf 8022488-898829999 Q T0582 194 EALSATA-GARGAKIWM 209 (222) Q Consensus 194 ~~H~~~a-~~~Gc~i~v 209 (222) ..|.... +.+.+.++. T Consensus 317 ~~H~i~N~g~e~~~~l~ 333 (385) T 1j58_A 317 MGHYVENIGDEPLVFLE 333 (385) T ss_dssp CBEEEEECSSSCEEEEE T ss_pred CEEEEEECCCCCEEEEE T ss_conf 75999975999889999 No 23 >2phd_A Gentisate 1,2-dioxygenase; beta-sandwich, oxidoreductase; 2.90A {Pseudaminobacter salicylatoxidans} SCOP: b.82.1.23 Probab=99.21 E-value=1.2e-09 Score=74.30 Aligned_cols=186 Identities=18% Similarity=0.190 Sum_probs=119.7 Q ss_pred CCCEEEEEEECCCCCEE--------EEEEEEEECCCCCCCCCCCCCCEEEEEEEEE--EECCC---CCCCCCCEEECCCC Q ss_conf 89557999502688705--------7999999568985788877764699998778--87278---61168616885889 Q T0582 25 MKGVERRMLDRIGGEVA--------RATSIVRYAPGSRFSAHTHDGGEEFIVLDGV--FQDEH---GDYPAGTYVRNPPT 91 (222) Q Consensus 25 ~~Gv~~~~L~~~~~e~g--------~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~--~~d~~---~~~~~G~y~~~p~g 91 (222) ..+.+|+.|.-.+...+ -...+..+.||...|.|+|...+..|||+|. +.--+ -.+.+||++.-|++ T Consensus 78 ~~~~~rr~~~l~np~~~~~~~~t~~l~a~~q~~~PGe~~~~HrH~~~a~~~vieG~G~~t~v~g~~~~~~~GD~~~~P~~ 157 (368) T 2phd_A 78 GRGGERRALGLANPGLGGNAYISPTMWAGIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNGDPVRMSRGDLLLTPGW 157 (368) T ss_dssp SSSCTTCEEEECCTTSTTCCCSSSSCEEEEEEECTTCEEEEEEESSCEEEEEEECEEEEEEETTEEEEEETTCEEEECTT T ss_pred CCCCCEEEEEEECCCCCCCCCCCHHHHHHEEEECCCCCCCCCCCCHHHEEEEEECCCEEEEECCEEEEEECCCEEEECCC T ss_conf 54652457995579999876415535502499789983785658642249999898578978999988658999970899 Q ss_pred CCCCEE--CCCCEEEEEEE-----ECCCC-----CCC--CEEE-ECCC---------------------H-----H---- Q ss_conf 822326--48880899990-----02795-----665--6078-0761---------------------3-----5---- Q T0582 92 TSHVPG--SAEGCTIFVKL-----WQFDP-----ADR--TQFS-KNME---------------------A-----E---- 126 (222) Q Consensus 92 s~H~p~--s~~Gc~~~vkl-----~q~~~-----~d~--~~v~-idt~---------------------~-----~---- 126 (222) ..|.-. +++.|.++--+ ..+.. .+. ..+. .+.. . . T Consensus 158 ~~H~h~n~gd~~~~~l~~~d~pl~~~l~~~f~E~~~~~~~~~~~p~~~~~~~~~~~~~l~P~~~~~~~~~sP~~~ypw~~ 237 (368) T 2phd_A 158 CFHGHMNDTDQPMAWIDGLDIPFSQQMDVGFFEFGSDRVTDYATPNFSRGERLWCHPGLRPLSGLQNTVASPIGAYRWEF 237 (368) T ss_dssp CCEEEEECSSSCEEEEEEECHHHHHHTTCCCEEECCC--CCCCCCSSCHHHHHHCSTTEEEGGGCSCCSSCSCSEECHHH T ss_pred CEEEEEECCCCCEEEEECCCCHHHHHCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH T ss_conf 61760507998889998247677774485310046433454557876511232136665665555556778765666145 Q ss_pred -------------CCC----CCCCEEEEEEECCC------CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE--ECCC Q ss_conf -------------066----66862789872089------8489999968897447769886799-99877898--2893 Q T0582 127 -------------LGA----PVEGISTSLLHEDE------RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VNDE 180 (222) Q Consensus 127 -------------~~~----~~~Gv~~~~L~~~~------~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~--d~~~ 180 (222) .+. ...++.+....... .-...+.+++||.....|.|...++ +||+|+-+ .++. T Consensus 238 ~~~al~~~~~~~~e~~~~~~~~g~~~v~y~np~tG~~~~pti~~~~~~L~pG~~~~~hrht~~~v~~VieG~G~~~i~g~ 317 (368) T 2phd_A 238 TDRALTEQLLLEDEGQPATVAPGHAAIRYVNPTTGGDVMPTLRCEFHRLRAGTETATRNEVGSTVFQVFEGAGAVVMNGE 317 (368) T ss_dssp HHHHHHHHHHHHHTTCSCSSBTTEEEEEEBCTTTSSBSBTTBEEEEEEECTTCBCCCEEESSCEEEEEEESCEEEEETTE T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCE T ss_conf 89889998742545565666786259996255557866662068888627998578730157189999978199998999 Q ss_pred --EECCCEEEECCCCCCEEEEECCCCCEEEEEE Q ss_conf --2168617981899802248889882999983 Q T0582 181 --VLGRNAWLRLPEGEALSATAGARGAKIWMKT 211 (222) Q Consensus 181 --~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vKT 211 (222) .+.+||.+..|++..|+..+ .++|.+|.-+ T Consensus 318 ~~~w~~gDvf~vP~w~~h~h~~-~~~a~Lf~i~ 349 (368) T 2phd_A 318 TTKLEKGDMFVVPSWVPWSLQA-ETQFDLFRFS 349 (368) T ss_dssp EEEECTTCEEEECTTCCEEEEE-SSCEEEEEEE T ss_pred EEEEECCCEEEECCCCEEEEEC-CCCEEEEEEC T ss_conf 9898089999919998398861-8976999976 No 24 >2pfw_A Cupin 2, conserved barrel domain protein; YP_751781.1, cupin domain, structural genomics; 1.90A {Shewanella frigidimarina ncimb 400} Probab=99.20 E-value=7.5e-11 Score=81.32 Aligned_cols=93 Identities=20% Similarity=0.198 Sum_probs=75.9 Q ss_pred EEEEECCCCCCEECCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC----CCCCCCCCCE Q ss_conf 167705646633158895579995026887057999999568985788877764699998778872----7861168616 Q T0582 10 PVVIDTDQLEWRPSPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD----EHGDYPAGTY 85 (222) Q Consensus 10 ~~~v~~~~~~W~~~p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d----~~~~~~~G~y 85 (222) ..+...++.+|... .+|+.+|+|... ++. ....+.|+||+..|.|.|+..|.+|||+|.+.. +...+.+|+. T Consensus 6 ~~f~~~~~i~~e~l-~~Gi~~k~l~~~-~~~--~~~~v~~~~G~~~~~H~H~~~e~~~vl~G~~~~~~~g~~~~~~~Gd~ 81 (116) T 2pfw_A 6 EHFSFGEQTEIEDI-GGGLKRQMLGFN-HEL--MAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDGVIKVLTAGDS 81 (116) T ss_dssp CSEECTTTSCCEEC-STTEEEEEEEEE-TTE--EEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEETTEEEEECTTCE T ss_pred CEEECCCCCEEEEC-CCCEEEEEEECC-CCE--EEEEEEECCCCCCCCEECCCCEEEEEEECCEEEEECCEEEECCCCEE T ss_conf 14661787501998-899799998739-988--99999999998388899984349999989199999999999169839 Q ss_pred EECCCCCCCCEECCCCEEEEE Q ss_conf 885889822326488808999 Q T0582 86 VRNPPTTSHVPGSAEGCTIFV 106 (222) Q Consensus 86 ~~~p~gs~H~p~s~~Gc~~~v 106 (222) ++.|+|..|...+.+.|.++. T Consensus 82 i~iP~~~~H~~~~~~~~~~l~ 102 (116) T 2pfw_A 82 FFVPPHVDHGAVCPTGGILID 102 (116) T ss_dssp EEECTTCCEEEEESSCEEEEE T ss_pred EEECCCCCEEEEECCCEEEEE T ss_conf 998969979779799929999 No 25 >2pfw_A Cupin 2, conserved barrel domain protein; YP_751781.1, cupin domain, structural genomics; 1.90A {Shewanella frigidimarina ncimb 400} Probab=99.05 E-value=1.1e-09 Score=74.42 Aligned_cols=89 Identities=18% Similarity=0.137 Sum_probs=71.4 Q ss_pred CHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE----CCCEECCCEEEECCCCCCEEE Q ss_conf 135066668627898720898489999968897447769886799-998778982----893216861798189980224 Q T0582 124 EAELGAPVEGISTSLLHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV----NDEVLGRNAWLRLPEGEALSA 198 (222) Q Consensus 124 ~~~~~~~~~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d----~~~~~~~Gs~i~~P~g~~H~~ 198 (222) ...|....+|++.+.|..++.-.+..+.++||+..|.|.|.++|+ +||+|++.. +...+.+||.++.|++..|+. T Consensus 13 ~i~~e~l~~Gi~~k~l~~~~~~~~~~v~~~~G~~~~~H~H~~~e~~~vl~G~~~~~~~g~~~~~~~Gd~i~iP~~~~H~~ 92 (116) T 2pfw_A 13 QTEIEDIGGGLKRQMLGFNHELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDGVIKVLTAGDSFFVPPHVDHGA 92 (116) T ss_dssp TSCCEECSTTEEEEEEEEETTEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEE T ss_pred CCEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCCEECCCCEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCEEE T ss_conf 75019988997999987399889999999999838889998434999998919999999999916983999896997977 Q ss_pred EECCCCCEEEEEEC Q ss_conf 88898829999836 Q T0582 199 TAGARGAKIWMKTG 212 (222) Q Consensus 199 ~a~~~Gc~i~vKTG 212 (222) .+.++...+.|.|= T Consensus 93 ~~~~~~~~l~v~tP 106 (116) T 2pfw_A 93 VCPTGGILIDTFSP 106 (116) T ss_dssp EESSCEEEEEEEES T ss_pred EECCCEEEEEEECC T ss_conf 97999299999999 No 26 >2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloenzyme, trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A Probab=99.05 E-value=6.6e-09 Score=69.92 Aligned_cols=180 Identities=17% Similarity=0.113 Sum_probs=112.6 Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE----CCCC----CCCCCCEEECCCCCCC Q ss_conf 5889557999502688705799999956898578887776469999877887----2786----1168616885889822 Q T0582 23 SPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ----DEHG----DYPAGTYVRNPPTTSH 94 (222) Q Consensus 23 ~p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~----d~~~----~~~~G~y~~~p~gs~H 94 (222) ...|.|..|.|+.+ + .+.++-=.||++-..|.|...|.+|||+|.+. ++.+ +..+|+.++.|+|..| T Consensus 17 ~l~ppv~n~~~~~~-~----~~~m~vggpn~r~d~H~h~~~E~fyvl~G~~~l~v~~~G~~~~v~i~~GDi~~~P~~vpH 91 (286) T 2qnk_A 17 SFQPPVCNKLMHQE-Q----LKVMFIGGPNTRKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPH 91 (286) T ss_dssp GSSTTTCEEEEEES-S----EEEEEECSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCE T ss_pred HCCCCCCCEEEECC-C----EEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCEEEEEECCCCEEEECCCCCC T ss_conf 51899573577518-8----089996799877757538825189999267999998389748988579888996799984 Q ss_pred CEECCC-C-EEEEEEEECCCCCCC--------C--------------------------------------------EEE Q ss_conf 326488-8-089999002795665--------6--------------------------------------------078 Q T0582 95 VPGSAE-G-CTIFVKLWQFDPADR--------T--------------------------------------------QFS 120 (222) Q Consensus 95 ~p~s~~-G-c~~~vkl~q~~~~d~--------~--------------------------------------------~v~ 120 (222) .|..-+ + +++|..++.....|- . ++. T Consensus 92 s~q~~~d~~glv~e~~~~~~~~d~~~w~~~~~~~~l~~~~f~~~~~~~~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 171 (286) T 2qnk_A 92 SPQRFANTVGLVVERRRLETELDGLRYYVGDTMDVLFEKWFYCKDLGTQLAPIIQEFFSSEQYRTGKPIPDQLLKEPPFP 171 (286) T ss_dssp EEEECTTCEEEEEEECCCTTCCEEEEEESTTSSSEEEEEEECCSSHHHHHHHHHHHHHTSHHHHHSCCCGGGSCSSCSSC T ss_pred CCEECCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHCCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCC T ss_conf 76674894399998418887532389841597617878763568255326621441327611203788998532356867 Q ss_pred ECCCH--------HCC-----CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CC--CEE Q ss_conf 07613--------506-----6668627898720898489999968897447769886799-998778982--89--321 Q T0582 121 KNMEA--------ELG-----APVEGISTSLLHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--ND--EVL 182 (222) Q Consensus 121 idt~~--------~~~-----~~~~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~--~~~ 182 (222) .++.. .|. ...++...+.+. +..+. .+.+.+|+....|.|..+|+ |+|+|++.. ++ -.+ T Consensus 172 ~~~~~~~~P~~~~~~l~~~~~~l~~~~~~~~~~-~~~~f--~v~~~~~~~~e~H~~~~dE~~y~leG~~~v~v~~~t~~l 248 (286) T 2qnk_A 172 LSTRSIMEPMSLDAWLDSHHRELQAGTPLSLFG-DTYET--QVIAYGQGSSEGLRQNVDVWLWQLEGSSVVTMGGRRLSL 248 (286) T ss_dssp CCCCCCCCCEEHHHHHHHTHHHHHTTCCEESSC-TTSSE--EEEEECSEEEEECCCSSCEEEEEEESCEEEEETTEEEEE T ss_pred CCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEE-CCCEE--EEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCEEEEE T ss_conf 876644785247788751764005898538973-68548--999517876667668876599995695799987879981 Q ss_pred CCCEEEECCCCCCEEEEECCCCCEEEEEE Q ss_conf 68617981899802248889882999983 Q T0582 183 GRNAWLRLPEGEALSATAGARGAKIWMKT 211 (222) Q Consensus 183 ~~Gs~i~~P~g~~H~~~a~~~Gc~i~vKT 211 (222) .+||.+.+|+|+.|++...+ ||.+++-+ T Consensus 249 ~~GD~~~iP~g~~h~~~~~~-~ti~l~v~ 276 (286) T 2qnk_A 249 APDDSLLVLAGTSYAWERTQ-GSVALSVT 276 (286) T ss_dssp CTTEEEEECTTCCEEEEECT-TCEEEEEE T ss_pred CCCCEEEECCCCCCCEECCC-CEEEEEEE T ss_conf 69998997998975545689-96999996 No 27 >3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structure initiative; 1.85A {Rhodopseudomonas palustris tie-1} Probab=98.83 E-value=1e-08 Score=68.87 Aligned_cols=83 Identities=19% Similarity=0.185 Sum_probs=63.6 Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--CC--CCCCCCCEEECCCCCCCCEEC Q ss_conf 58895579995026887057999999568985788877764699998778872--78--611686168858898223264 Q T0582 23 SPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EH--GDYPAGTYVRNPPTTSHVPGS 98 (222) Q Consensus 23 ~p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~H~p~s 98 (222) .|..|+.|+.|..+ ...+....++.++||+..|.|.|...|.+|||+|.... ++ ....+|++++.|+|..|.... T Consensus 26 ~p~~g~~r~~l~~~-p~~~~~~~~~~v~PG~~~~~H~H~~~e~~~Vl~G~~~~~v~g~~~~l~~Gd~i~ip~~~~H~~~n 104 (156) T 3kgz_A 26 APFQDVSRQLLFAD-PNLACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLVGETISDVAQGDLVFIPPMTWHQFRA 104 (156) T ss_dssp CSSEEEEEEEEECC-TTCSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEEC T ss_pred CCCCCEEEEEEECC-CCCCEEEEEEEECCCEECCCCCCCCCEEEEEEECEEEEECCCEEEEECCCEEEECCCCCEEEEEE T ss_conf 88787499998718-98635899999899926435468651999999785489739999980255699859998199795 Q ss_pred --CCCEEEEE Q ss_conf --88808999 Q T0582 99 --AEGCTIFV 106 (222) Q Consensus 99 --~~Gc~~~v 106 (222) ++.+.++. T Consensus 105 ~g~e~l~fLc 114 (156) T 3kgz_A 105 NRGDCLGFLC 114 (156) T ss_dssp CSSSCEEEEE T ss_pred CCCCCEEEEE T ss_conf 8999899999 No 28 >3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A Probab=98.83 E-value=1.6e-08 Score=67.65 Aligned_cols=98 Identities=16% Similarity=0.213 Sum_probs=67.3 Q ss_pred EECCCCCCEECCCCC---EE-EEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEE--EC-CC---CCCCC Q ss_conf 705646633158895---57-99950268870579999995689857888777646999987788--72-78---61168 Q T0582 13 IDTDQLEWRPSPMKG---VE-RRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVF--QD-EH---GDYPA 82 (222) Q Consensus 13 v~~~~~~W~~~p~~G---v~-~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~--~d-~~---~~~~~ 82 (222) |+..+.+......+| +. ++++....+.......++.++||+..|.|.|+..|++|||+|.. .. ++ ..+.+ T Consensus 6 v~~~~~~~e~~~~pg~~~~~~r~~i~~~~g~~~f~~~~~~l~PG~~~p~H~H~~~e~~~vl~G~~~~~~~d~g~~~~l~~ 85 (145) T 3ht1_A 6 VHRTDVKAEIVREPGAKETTHRKLIDTPDGADRFVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQGRTEEVGP 85 (145) T ss_dssp CCGGGSCCEECCSTTCEEEEEEEEECGGGTCCSEEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGTEEEEECT T ss_pred EECCCCCCEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCEECCCCEEEEEEEEEEEEEEECCCEEEEECC T ss_conf 00000640456079987469999576988988089999999999877699888858999999688999727978999779 Q ss_pred CCEEECCCCCCCCEE--CCCCEEEEEEEEC Q ss_conf 616885889822326--4888089999002 Q T0582 83 GTYVRNPPTTSHVPG--SAEGCTIFVKLWQ 110 (222) Q Consensus 83 G~y~~~p~gs~H~p~--s~~Gc~~~vkl~q 110 (222) |++++.|+|..|... +++.|.+++..-. T Consensus 86 Gd~~~ip~g~~H~~~N~~~~~~~~l~v~~~ 115 (145) T 3ht1_A 86 GEAIFIPRGEPHGFVTGPGQTCRFLVVAPC 115 (145) T ss_dssp TCEEEECTTCCBEEECCTTCCEEEEEEEES T ss_pred CCEEECCCCCEEEEEECCCCCEEEEEEECC T ss_conf 988872999919989899999999999877 No 29 >3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23 Probab=98.80 E-value=1e-06 Score=57.09 Aligned_cols=169 Identities=18% Similarity=0.226 Sum_probs=111.0 Q ss_pred EEEEEEECCCCCCCCCCCCCCEEEEEEEE--EEE--CCC-CCCCCCCEEECCCCCCCCEECC-CC--EEEEEE-----EE Q ss_conf 99999956898578887776469999877--887--278-6116861688588982232648-88--089999-----00 Q T0582 43 ATSIVRYAPGSRFSAHTHDGGEEFIVLDG--VFQ--DEH-GDYPAGTYVRNPPTTSHVPGSA-EG--CTIFVK-----LW 109 (222) Q Consensus 43 ~t~lvr~~pG~~~p~H~H~~~ee~~VL~G--~~~--d~~-~~~~~G~y~~~p~gs~H~p~s~-~G--c~~~vk-----l~ 109 (222) +..|.-+.||-..|.|+|.....-||++| .+. |+. -.+.+|+++.-|.+..|.=... .+ |.-+-- +. T Consensus 124 ~a~~Q~i~PGE~a~~HRH~~~AlrfiveG~Ga~T~V~G~~~~m~~gD~~~TP~~~wH~H~n~~~d~p~iWLDgLDiPlv~ 203 (394) T 3bu7_A 124 FSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLDIPLTN 203 (394) T ss_dssp EEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEEEEECHHHHH T ss_pred HHHEEEECCCCCCCCCCCCHHHEEEEEECCCCEEEECCEEEEECCCCEEECCCCCEEECCCCCCCCCEEEEECCCHHHHH T ss_conf 73324327898677566775242788955760598889896512899894699830303457999856998256578885 Q ss_pred CCCC-------CCCCEEEE---------------------CCCH-----HC----------------CCCCCCEEEEEEE Q ss_conf 2795-------66560780---------------------7613-----50----------------6666862789872 Q T0582 110 QFDP-------ADRTQFSK---------------------NMEA-----EL----------------GAPVEGISTSLLH 140 (222) Q Consensus 110 q~~~-------~d~~~v~i---------------------dt~~-----~~----------------~~~~~Gv~~~~L~ 140 (222) +|+. .+++++.. ++.. .. ..+..|+.+.... T Consensus 204 ~l~a~F~E~~~~~~q~~~~~~~~s~~~~g~~~l~p~~~~~~~~~sP~~~Ypw~~t~~aL~~~a~~~~~~p~~g~~l~Y~N 283 (394) T 3bu7_A 204 CLEANFYEVHPNDYQTTDIPLNDSPLTYGGPALLPQLDKWDKPYSPLLKYSWEPTYEALLNYAKASDGSPYDGLILRYTN 283 (394) T ss_dssp HTTCCCEEECTTSSCCCCCCTTHHHHHHCSTTEEESSCCCCCSSCSCCEECHHHHHHHHHHHHTTCCCBTTTBEEEEECC T ss_pred HCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECC T ss_conf 25862320475435767589885775616776554335667776753247889999999999855588867835999627 Q ss_pred CCC------CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE--ECCC--EECCCEEEECCCCCCEEEEEC--CCCCEE Q ss_conf 089------8489999968897447769886799-99877898--2893--216861798189980224888--988299 Q T0582 141 EDE------RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VNDE--VLGRNAWLRLPEGEALSATAG--ARGAKI 207 (222) Q Consensus 141 ~~~------~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~--d~~~--~~~~Gs~i~~P~g~~H~~~a~--~~Gc~i 207 (222) ... .-...+++++||.....|.|.+..+ +|++|+-. .++. .+.+||.+..|+...|+.... .+.|.+ T Consensus 284 P~TGg~~~pTi~~~~q~L~pG~~t~~hRht~saV~~VieG~G~s~Igg~~~~W~~GD~FvVPsW~~h~H~N~sa~e~a~L 363 (394) T 3bu7_A 284 PQTGGHPMLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHEHCNTQERDDACL 363 (394) T ss_dssp TTTSSCSSSSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETTEEEEECTTCEEEECTTCCEEEEECCSSCCEEE T ss_pred CCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEEECCCCEEEECCCCCEEECCCCCCCCEEE T ss_conf 78888876537550478589987788566563899999681799989999996289989979998446224688897799 Q ss_pred EEEE Q ss_conf 9983 Q T0582 208 WMKT 211 (222) Q Consensus 208 ~vKT 211 (222) |.-+ T Consensus 364 f~~s 367 (394) T 3bu7_A 364 FSFN 367 (394) T ss_dssp EEEE T ss_pred EEEC T ss_conf 9975 No 30 >2q30_A Uncharacterized protein; YP_388795.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp} Probab=98.78 E-value=6e-08 Score=64.32 Aligned_cols=83 Identities=20% Similarity=0.215 Sum_probs=60.7 Q ss_pred CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCC--CEEE-EEEEEEEEE---CCC--EECCCEEEECCCCCCEEEEE Q ss_conf 666862789872089848999996889744776988--6799-998778982---893--21686179818998022488 Q T0582 129 APVEGISTSLLHEDERETVTHRKLEPGANLTSEAAG--GIEV-LVLDGDVTV---NDE--VLGRNAWLRLPEGEALSATA 200 (222) Q Consensus 129 ~~~~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~--GeEi-~VLeG~l~d---~~~--~~~~Gs~i~~P~g~~H~~~a 200 (222) ....++....|++++.-.+.++.++||..+|.|.|. ++++ +||+|+... ++. .+.+||.+..|+|..|+..+ T Consensus 17 f~~~~~~~~~l~~~~~~~v~~~~l~pG~~~~~H~H~~~~e~~~~Vl~G~~~~~~~g~~~~~l~~Gd~i~~p~~~~H~~~~ 96 (110) T 2q30_A 17 FDDQRFVMELVHESENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGDAVIPAPRGAVLVAPISTPHGVRA 96 (110) T ss_dssp CCSSSCEEEEEEECSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGGCEEEECTTEEEEEETTSCEEEEE T ss_pred CCCCCEEEEEEEECCCEEEEEEEECCCCCCCCEECCCCCCEEEEEEECEEEEEECCCEEEEECCCEEEEECCCCEEEEEE T ss_conf 47997999998979983999999999977574138999768999995989999689487895388699998999799898 Q ss_pred CCCCCEEE-EEEC Q ss_conf 89882999-9836 Q T0582 201 GARGAKIW-MKTG 212 (222) Q Consensus 201 ~~~Gc~i~-vKTG 212 (222) .+ .|.++ +.+. T Consensus 97 ~~-d~~~l~v~sP 108 (110) T 2q30_A 97 VT-DMKVLVTIAP 108 (110) T ss_dssp SS-SEEEEEEEES T ss_pred CC-CCEEEEEECC T ss_conf 99-9799999889 No 31 >3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSGXRC, structural genomics; 2.00A {Halorhodospira halophila SL1} Probab=98.77 E-value=8.4e-08 Score=63.48 Aligned_cols=101 Identities=17% Similarity=0.178 Sum_probs=73.4 Q ss_pred CEEEEECCCCCCEE----------CCCCCEEEEEEECCCC---CEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC Q ss_conf 41677056466331----------5889557999502688---7057999999568985788877764699998778872 Q T0582 9 KPVVIDTDQLEWRP----------SPMKGVERRMLDRIGG---EVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD 75 (222) Q Consensus 9 ~~~~v~~~~~~W~~----------~p~~Gv~~~~L~~~~~---e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d 75 (222) .-.+++..++.|.. .+..|+.+..|..... ..+-...++.++||...|.|.|+..|.+|||+|.... T Consensus 10 ~~~v~k~~~~~we~~~~~~~k~~g~~f~g~~r~~l~~~~~~~~~~~f~~~~~~l~PG~~~~~H~H~~~E~~~vl~G~g~~ 89 (167) T 3ibm_A 10 ASRVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPAGQEAPAFETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEV 89 (167) T ss_dssp CCEEECEETTEETTCCCC---------CCEEEEEEECTTTTCCSSSEEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEE T ss_pred CCEEECCCCCCEECCCHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEECCCEEEEEEEECEEEE T ss_conf 53463468997031100001267897475379999568987668707999999869973787102102999999098999 Q ss_pred --CC--CCCCCCCEEECCCCCCCCEE--CCCCEEEEEEEE Q ss_conf --78--61168616885889822326--488808999900 Q T0582 76 --EH--GDYPAGTYVRNPPTTSHVPG--SAEGCTIFVKLW 109 (222) Q Consensus 76 --~~--~~~~~G~y~~~p~gs~H~p~--s~~Gc~~~vkl~ 109 (222) ++ -.+.+|++++.|+|..|.-. +++.|+.|+-+- T Consensus 90 ~i~~~~~~l~~Gd~i~ip~~~~H~~~n~g~~e~l~flci~ 129 (167) T 3ibm_A 90 VLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIV 129 (167) T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEE T ss_pred EECCEEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEEE T ss_conf 9899998668997999897996997979999899999999 No 32 >1vj2_A Novel manganese-containing cupin TM1459; structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.65A {Thermotoga maritima} SCOP: b.82.1.10 Probab=98.77 E-value=1.2e-08 Score=68.44 Aligned_cols=96 Identities=18% Similarity=0.261 Sum_probs=57.4 Q ss_pred EEEEECCCCCCEE---CCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--CC--CCCCC Q ss_conf 1677056466331---58895579995026887057999999568985788877764699998778872--78--61168 Q T0582 10 PVVIDTDQLEWRP---SPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EH--GDYPA 82 (222) Q Consensus 10 ~~~v~~~~~~W~~---~p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~~--~~~~~ 82 (222) -++-+..+..+.+ ....|+..+.|........-...++.++||..+|.|.|+..|.+|||+|.... ++ ..+.+ T Consensus 13 mi~~r~~dv~~~~~~~~~~~g~~~r~l~~~~~~~~~~~~~~~i~PG~~~~~H~H~~~e~~yvl~G~~~~~~~~~~~~l~~ 92 (126) T 1vj2_A 13 MILKRAYDVTPQKISTDKVRGVRKRVLIGLKDAPNFVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQGEETVEE 92 (126) T ss_dssp CEEEEGGGSCCEEECSSSEEEEEEEEEECTTTCSSEEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEECSSCEEEEET T ss_pred EEEEEHHHCCCEEECCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEECCCCEEEEEEECCCEEEEEEEEEEECC T ss_conf 99969999884540166879879999978766895599999999998987898988199999945112898100058624 Q ss_pred CCEEECCCCCCCCEEC--CCCEEEE Q ss_conf 6168858898223264--8880899 Q T0582 83 GTYVRNPPTTSHVPGS--AEGCTIF 105 (222) Q Consensus 83 G~y~~~p~gs~H~p~s--~~Gc~~~ 105 (222) |++++.|+|..|...+ ++.|.++ T Consensus 93 Gd~~~ip~g~~H~~~n~~~~~~~~l 117 (126) T 1vj2_A 93 GFYIFVEPNEIHGFRNDTDSEVEFL 117 (126) T ss_dssp TEEEEECTTCCEEEECCSSSCEEEE T ss_pred CEEEEECCCCEEEEEECCCCCEEEE T ss_conf 4799999999299998999989999 No 33 >2ozj_A Cupin 2, conserved barrel; EAT53321.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense dcb-2} Probab=98.76 E-value=5.1e-08 Score=64.76 Aligned_cols=61 Identities=16% Similarity=0.225 Sum_probs=29.6 Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--C--CCCCCCCCEEECCCCCCCCEECCCCEEEE Q ss_conf 9999568985788877764699998778872--7--86116861688588982232648880899 Q T0582 45 SIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--E--HGDYPAGTYVRNPPTTSHVPGSAEGCTIF 105 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~--~~~~~~G~y~~~p~gs~H~p~s~~Gc~~~ 105 (222) .++.++||...|.|.|++.+.+|||+|...- + .-...+|+.++.|+|..|...+.+.|.++ T Consensus 41 ~~~~l~~G~~~~~H~h~~~~~~~vl~G~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~a~~~~~~l 105 (114) T 2ozj_A 41 SLFSFADGESVSEEEYFGDTLYLILQGEAVITFDDQKIDLVPEDVLMVPAHKIHAIAGKGRFKML 105 (114) T ss_dssp EEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCCBEEEEEEEEEEE T ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEECCEEEEECCCEEEEECCCCEEEEEECCCCEEE T ss_conf 99999999956750899988999998899999999999963986999789995997989996899 No 34 >1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12 Probab=98.71 E-value=9.5e-07 Score=57.31 Aligned_cols=168 Identities=17% Similarity=0.169 Sum_probs=104.9 Q ss_pred EEEEEEECCCCCCCCCCCCCCEEE-EEEEEEEE--CCC---CCCCCCCEEECCCC--CCCCEE--CCCCEEEEEEEECCC Q ss_conf 999999568985788877764699-99877887--278---61168616885889--822326--488808999900279 Q T0582 43 ATSIVRYAPGSRFSAHTHDGGEEF-IVLDGVFQ--DEH---GDYPAGTYVRNPPT--TSHVPG--SAEGCTIFVKLWQFD 112 (222) Q Consensus 43 ~t~lvr~~pG~~~p~H~H~~~ee~-~VL~G~~~--d~~---~~~~~G~y~~~p~g--s~H~p~--s~~Gc~~~vkl~q~~ 112 (222) +-.--+++||..||.|-|.+.|-+ |||+|.+. |.. +...+|+.-+--+| ..|.-. ++++-+=+.-+|-.+ T Consensus 42 v~ndd~i~p~~gf~~HPHrg~eivTyvl~G~~~H~DS~G~~~~i~~G~vQ~MtAG~GI~HsE~~~~~~~~~~~~QiWi~P 121 (242) T 1tq5_A 42 VINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIMP 121 (242) T ss_dssp EEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEEESSSCEEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEECC T ss_pred EEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEEECCC T ss_conf 87744527998679877598468999962699983178871677799389996578579976135764115677733040 Q ss_pred CCCCC-----EEEECCCHHCCCC--CCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCE--EEEEEEEEEEECCCEEC Q ss_conf 56656-----0780761350666--686278987208984899999688974477698867--99998778982893216 Q T0582 113 PADRT-----QFSKNMEAELGAP--VEGISTSLLHEDERETVTHRKLEPGANLTSEAAGGI--EVLVLDGDVTVNDEVLG 183 (222) Q Consensus 113 ~~d~~-----~v~idt~~~~~~~--~~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~Ge--Ei~VLeG~l~d~~~~~~ 183 (222) ..... ++..+....+... ..|.. -++.......++...+.+|..+......+. =+||++|++..++..+. T Consensus 122 ~~~~~~p~y~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~lyvi~G~l~i~g~~l~ 200 (242) T 1tq5_A 122 EENGITPRYEQRRFDAVQGKQLVLSPDARD-GSLKVHQDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKAS 200 (242) T ss_dssp SSCSCCCEEEEECCCCCSSEEEEEESSCGG-GCEECSSSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEETTEEEE T ss_pred HHHCCCCCCHHCCCCCCCCEEEECCCCCCC-CCCCCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEEEEEEEECCEECC T ss_conf 333566660110000354327862444344-8742347727888780578508960466533999997778999999836 Q ss_pred CCEEEECCCCCCEEEEECCCCCEEEEEEC Q ss_conf 86179818998022488898829999836 Q T0582 184 RNAWLRLPEGEALSATAGARGAKIWMKTG 212 (222) Q Consensus 184 ~Gs~i~~P~g~~H~~~a~~~Gc~i~vKTG 212 (222) +|+.+.+-.+......+ .++|.+++-.| T Consensus 201 ~gd~~~i~~~~~l~i~a-~~~a~~LL~~g 228 (242) T 1tq5_A 201 TSDGLAIWDEQAISIHA-DSDSEVLLFDL 228 (242) T ss_dssp TTCEEEEESCSCEEEEE-SSSEEEEEEEE T ss_pred CCCEEEECCCCEEEEEE-CCCCEEEEEEC T ss_conf 78859986898499997-99988999977 No 35 >3fjs_A Uncharacterized protein with RMLC-like cupin fold; YP_298287.1, protein of unknown function with RMLC-like cupin fold; HET: MSE; 1.90A {Ralstonia eutropha JMP134} Probab=98.67 E-value=5.7e-08 Score=64.46 Aligned_cols=76 Identities=21% Similarity=0.303 Sum_probs=50.3 Q ss_pred CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CC--CEECCCEEEECCCCCCEEEEECCCCCE Q ss_conf 8627898720898489999968897447769886799-998778982--89--321686179818998022488898829 Q T0582 132 EGISTSLLHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--ND--EVLGRNAWLRLPEGEALSATAGARGAK 206 (222) Q Consensus 132 ~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~--~~~~~Gs~i~~P~g~~H~~~a~~~Gc~ 206 (222) .+.....|++.+...+.++.++||..+|.|.|.++|+ +||+|++.. ++ -.+.+|++++.|++..|...+- +.+. T Consensus 23 ~~~~~~~l~~~~~~~v~~~~l~~G~~~p~H~H~~~~~~~Vl~G~~~~~~~~~~~~l~~G~~v~ip~g~~H~~~a~-~d~~ 101 (114) T 3fjs_A 23 TQTPSAALFKEHRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGAQRRLHQGDLLYLGAGAAHDVNAI-TNTS 101 (114) T ss_dssp GGCCCEEEEEETTEEEEEEEECTTCEEEEECCSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEES-SSEE T ss_pred CCCEEEEEEECCCEEEEEEEECCCCCCCCEECCCCEEEEEEECEEEEEEEEEEEECCCCEEEECCCCCEEEEEEC-CCCE T ss_conf 883789999899979999999999847888999968999994999999852039857992998799996997988-9978 Q ss_pred EE Q ss_conf 99 Q T0582 207 IW 208 (222) Q Consensus 207 i~ 208 (222) ++ T Consensus 102 ~l 103 (114) T 3fjs_A 102 LL 103 (114) T ss_dssp EE T ss_pred EE T ss_conf 99 No 36 >1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like protein, protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A* Probab=98.66 E-value=2.4e-07 Score=60.82 Aligned_cols=91 Identities=20% Similarity=0.210 Sum_probs=69.8 Q ss_pred CCEEEEECCCCCCEECCCCCEEEEEEECC--CCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--CCC----- Q ss_conf 84167705646633158895579995026--887057999999568985788877764699998778872--786----- Q T0582 8 TKPVVIDTDQLEWRPSPMKGVERRMLDRI--GGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EHG----- 78 (222) Q Consensus 8 ~~~~~v~~~~~~W~~~p~~Gv~~~~L~~~--~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~~~----- 78 (222) ...++.+.++++......+|+.+..+... .+..--...++.++||+..|.|.|+..|.+|||+|.... ++. T Consensus 5 d~~~vr~~~e~p~~~~~~~g~~~~t~~~~~~~g~~~~~v~~~~l~PG~~~~~H~H~~~E~~~Vl~G~g~~~~~g~~~~~~ 84 (163) T 1lr5_A 5 DNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYP 84 (163) T ss_dssp CCCSEEEGGGSCCBCTTCTTEEEEEEECHHHHCCSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSC T ss_pred CCCCEECHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEECCCCEEEEEEEEEEEEEECCCCCCCC T ss_conf 67415036378743468897348986345568865789999999999848864278847999995679999888313225 Q ss_pred ------CCCCCCEEECCCCCCCCEEC Q ss_conf ------11686168858898223264 Q T0582 79 ------DYPAGTYVRNPPTTSHVPGS 98 (222) Q Consensus 79 ------~~~~G~y~~~p~gs~H~p~s 98 (222) .+.+|++++.|+|..|+.+. T Consensus 85 ~~~~~~~l~~Gd~i~iP~~~~H~~~N 110 (163) T 1lr5_A 85 GQPQEIPFFQNTTFSIPVNDPHQVWN 110 (163) T ss_dssp CSCEEEEECTTEEEEECTTCCEEEEC T ss_pred CCCEEEEECCCCEEEECCCCCEEEEE T ss_conf 76348995699899989699579697 No 37 >1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 2.00A {Streptococcus pyogenes m1 gas} SCOP: b.82.1.9 Probab=98.63 E-value=2e-07 Score=61.28 Aligned_cols=64 Identities=14% Similarity=0.273 Sum_probs=36.1 Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--C--CCCCCCCCEEECCCCCCCCEECCCCEEEEEEE Q ss_conf 9999568985788877764699998778872--7--86116861688588982232648880899990 Q T0582 45 SIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--E--HGDYPAGTYVRNPPTTSHVPGSAEGCTIFVKL 108 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~--~~~~~~G~y~~~p~gs~H~p~s~~Gc~~~vkl 108 (222) .++.++||...|.|.|++.|-+|||+|.... + .-...+|+.++.|+|..|...+.+.|.+++-+ T Consensus 43 ~~~~~~~G~~~~~H~h~~~~~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~i~a~~~~~~l~~~ 110 (115) T 1yhf_A 43 TVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQETYRVAEGQTIVMPAGIPHALYAVEAFQMLLVV 110 (115) T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTSCEEEEESSCEEEEEEE T ss_pred EEEEECCCCCCCEEECCCCEEEEEEEEEEEEEEEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEE T ss_conf 99999999812228899879999997689999866999737748999789973997979994999999 No 38 >1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 2.00A {Streptococcus pyogenes m1 gas} SCOP: b.82.1.9 Probab=98.59 E-value=1.4e-07 Score=62.24 Aligned_cols=77 Identities=14% Similarity=0.241 Sum_probs=63.2 Q ss_pred CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEECCCCCE Q ss_conf 8627898720898489999968897447769886799-998778982--893--21686179818998022488898829 Q T0582 132 EGISTSLLHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATAGARGAK 206 (222) Q Consensus 132 ~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a~~~Gc~ 206 (222) .++....|.+.++-++.++.++||..++.|.|.++|+ +||+|++.. ++. .+.+|+.++.|+|..|...+. +.|. T Consensus 27 ~~~~s~~l~~~~~~~~~~~~~~~G~~~~~H~h~~~~~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~i~a~-~~~~ 105 (115) T 1yhf_A 27 DQMLSRTLVQRQDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQETYRVAEGQTIVMPAGIPHALYAV-EAFQ 105 (115) T ss_dssp TCEEEEEEEEETTEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTSCEEEEES-SCEE T ss_pred CCEEEEEEEECCCEEEEEEEECCCCCCCEEECCCCEEEEEEEEEEEEEEEEEEEECCCCEEEECCCCCEEEEEEC-CCCE T ss_conf 988999989789839999999999812228899879999997689999866999737748999789973997979-9949 Q ss_pred EEE Q ss_conf 999 Q T0582 207 IWM 209 (222) Q Consensus 207 i~v 209 (222) +++ T Consensus 106 ~l~ 108 (115) T 1yhf_A 106 MLL 108 (115) T ss_dssp EEE T ss_pred EEE T ss_conf 999 No 39 >2ozj_A Cupin 2, conserved barrel; EAT53321.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense dcb-2} Probab=98.59 E-value=2.9e-07 Score=60.36 Aligned_cols=88 Identities=16% Similarity=0.212 Sum_probs=69.8 Q ss_pred ECCCHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CC--CEECCCEEEECCCCCC Q ss_conf 076135066668627898720898489999968897447769886799-998778982--89--3216861798189980 Q T0582 121 KNMEAELGAPVEGISTSLLHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--ND--EVLGRNAWLRLPEGEA 195 (222) Q Consensus 121 idt~~~~~~~~~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~--~~~~~Gs~i~~P~g~~ 195 (222) +|..+.......++....|.+.++.++.++.++||..++.|.|.++++ +||+|++.. ++ -.+.+|++++.|++.. T Consensus 14 ~~l~~~~~~~~g~~~s~~l~~~~~~~i~~~~l~~G~~~~~H~h~~~~~~~vl~G~~~~~~~~~~~~l~~Gd~i~ip~~~~ 93 (114) T 2ozj_A 14 LPLASLIEARENQVLSMALAQSDRVQISLFSFADGESVSEEEYFGDTLYLILQGEAVITFDDQKIDLVPEDVLMVPAHKI 93 (114) T ss_dssp CCGGGGSCCCSSCEEEEECEECSSEEEEEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCC T ss_pred CCHHHHEEECCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEECCEEEEECCCEEEEECCCCE T ss_conf 16699053079989999978399819999999999956750899988999998899999999999963986999789995 Q ss_pred EEEEECCCCCEEEE Q ss_conf 22488898829999 Q T0582 196 LSATAGARGAKIWM 209 (222) Q Consensus 196 H~~~a~~~Gc~i~v 209 (222) |...+. +.|.++. T Consensus 94 H~~~a~-~~~~~l~ 106 (114) T 2ozj_A 94 HAIAGK-GRFKMLQ 106 (114) T ss_dssp BEEEEE-EEEEEEE T ss_pred EEEEEC-CCCEEEE T ss_conf 997989-9968999 No 40 >1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like protein, protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A* Probab=98.56 E-value=3.6e-07 Score=59.74 Aligned_cols=85 Identities=16% Similarity=0.188 Sum_probs=62.2 Q ss_pred CCCCCCCEEEEEEECC-----CCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CCC-----------EECCCEE Q ss_conf 0666686278987208-----98489999968897447769886799-998778982--893-----------2168617 Q T0582 127 LGAPVEGISTSLLHED-----ERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--NDE-----------VLGRNAW 187 (222) Q Consensus 127 ~~~~~~Gv~~~~L~~~-----~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~~-----------~~~~Gs~ 187 (222) .....+|+....+... ..-.+.++.++||+..+.|.|..+|+ |||+|+.+. ++. .+.+||. T Consensus 18 ~~~~~~g~~~~t~~~~~~~g~~~~~v~~~~l~PG~~~~~H~H~~~E~~~Vl~G~g~~~~~g~~~~~~~~~~~~~l~~Gd~ 97 (163) T 1lr5_A 18 SSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTT 97 (163) T ss_dssp BCTTCTTEEEEEEECHHHHCCSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEE T ss_pred CCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEECCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCE T ss_conf 34688973489863455688657899999999998488642788479999956799998883132257634899569989 Q ss_pred EECCCCCCEEEEE-CCCC-CEEEEEE Q ss_conf 9818998022488-8988-2999983 Q T0582 188 LRLPEGEALSATA-GARG-AKIWMKT 211 (222) Q Consensus 188 i~~P~g~~H~~~a-~~~G-c~i~vKT 211 (222) +..|++..|+.+. +.+. +.+++-. T Consensus 98 i~iP~~~~H~~~N~g~~E~l~~lv~~ 123 (163) T 1lr5_A 98 FSIPVNDPHQVWNSDEHEDLQVLVII 123 (163) T ss_dssp EEECTTCCEEEECCCSSSCEEEEEEE T ss_pred EEECCCCCEEEEECCCCCCEEEEEEE T ss_conf 99896995796979999888999996 No 41 >2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli} Probab=98.55 E-value=1.6e-06 Score=55.95 Aligned_cols=161 Identities=18% Similarity=0.212 Sum_probs=99.3 Q ss_pred EEECCCCCCCCCCCCCCEEE-EEEEEEEE--CC---CCCCCCCCEEECCCC--CCCCEE--CCCCEEEEEEEECCCCCCC Q ss_conf 99568985788877764699-99877887--27---861168616885889--822326--4888089999002795665 Q T0582 47 VRYAPGSRFSAHTHDGGEEF-IVLDGVFQ--DE---HGDYPAGTYVRNPPT--TSHVPG--SAEGCTIFVKLWQFDPADR 116 (222) Q Consensus 47 vr~~pG~~~p~H~H~~~ee~-~VL~G~~~--d~---~~~~~~G~y~~~p~g--s~H~p~--s~~Gc~~~vkl~q~~~~d~ 116 (222) =+++||..||.|.|.+.|-+ |||+|.+. |. .+...+|+.-+--+| ..|+-+ ++++.+-|+-+|-.+.... T Consensus 69 D~v~Pg~GF~~HPHr~~EivTyvl~G~l~H~DS~Gn~~~i~~G~vQ~MsAGsGI~HSE~n~~~~~~~~~lQIWI~P~~~~ 148 (256) T 2vec_A 69 EVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDACPQR 148 (256) T ss_dssp EEECTTCEEEEECCSSEEEEEEEEESEEEEEETTSCEEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEECCTTS T ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEECCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCHHC T ss_conf 57179987999899992999999851899858799998978993899958998288464179988628999876650206 Q ss_pred -----CEEEECCCHHCCCCC-CC-EEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEE-EEEEEEEEEE-----CCCEEC Q ss_conf -----607807613506666-86-2789872089848999996889744776988679-9998778982-----893216 Q T0582 117 -----TQFSKNMEAELGAPV-EG-ISTSLLHEDERETVTHRKLEPGANLTSEAAGGIE-VLVLDGDVTV-----NDEVLG 183 (222) Q Consensus 117 -----~~v~idt~~~~~~~~-~G-v~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeE-i~VLeG~l~d-----~~~~~~ 183 (222) .++..+.....-... .| -....++ ....++...+++|..+........- +||++|++.. +...+. T Consensus 149 ~~P~y~~~~~~~~~~~lvas~~g~~~~l~i~--qd~~l~~~~l~~g~~~~~~l~~~~~yl~vi~G~v~i~~~~~~~~~L~ 226 (256) T 2vec_A 149 ENPLIQKLALNMGKQQLIASPEGAMGSLQLR--QQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALT 226 (256) T ss_dssp CCCSEEEEECCCSSEEEEEESSCGGGCEECS--SSCEEEEEEECTTCEEEEECSSSEEEEEEEESCEEEEETTEEEEEEC T ss_pred CCCCCCEEECCCCCEEEEECCCCCCCCEECC--CCCEEEEEEECCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEC T ss_conf 9989634402578468997268876740004--67789999977997699982588289999998999803456650551 Q ss_pred CCEEEECCCCCCEEEEECCCCCEEEEE Q ss_conf 861798189980224888988299998 Q T0582 184 RNAWLRLPEGEALSATAGARGAKIWMK 210 (222) Q Consensus 184 ~Gs~i~~P~g~~H~~~a~~~Gc~i~vK 210 (222) +||-+.+.........+ .++|.+++- T Consensus 227 ~gDg~~i~~~~~l~l~a-~~~a~~LL~ 252 (256) T 2vec_A 227 CGDGAFIRDEANITLVA-DSPLRALLI 252 (256) T ss_dssp TTCEEEEESCSEEEEEE-SSSEEEEEE T ss_pred CCCEEEECCCCEEEEEE-CCCCEEEEE T ss_conf 67538974897699994-899799999 No 42 >2b8m_A Hypothetical protein MJ0764; 1499583, structural genomics, joint center for structural genomics, JCSG; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18 Probab=98.52 E-value=9.4e-07 Score=57.34 Aligned_cols=53 Identities=17% Similarity=0.278 Sum_probs=27.0 Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEEEE--CCC---CCCCCCCEEECCCCCCCCEE Q ss_conf 999956898578887776469999877887--278---61168616885889822326 Q T0582 45 SIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--DEH---GDYPAGTYVRNPPTTSHVPG 97 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~--d~~---~~~~~G~y~~~p~gs~H~p~ 97 (222) .++.++||...|.|.|+..|.+|||+|.+. .++ -.+.+|++++.|+|..|... T Consensus 30 ~~~~l~pG~~~p~H~H~~~e~~~Vl~G~~~~~~~~~e~~~~~~Gd~i~ip~~~~H~~~ 87 (117) T 2b8m_A 30 NHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLEDQEPHNYKEGNIVYVPFNVKMLIQ 87 (117) T ss_dssp EEEEEETTCBCCCEECSSCEEEEEEESEEEEEETTSCCEEEETTCEEEECTTCEEEEE T ss_pred EEEEECCCCEEEEEECCCCEEEEEEEEEEEEEEECCCEEEEEEEEEEEECCCCEEEEE T ss_conf 9999899975335538971599999717999982143179862279983399859999 No 43 >2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, plant protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B Probab=98.52 E-value=5.3e-06 Score=52.91 Aligned_cols=170 Identities=11% Similarity=0.094 Sum_probs=108.1 Q ss_pred EEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE----CCCC----CCCCCCEEECCCCCCCCEECC-CC-EEEEEEEEC Q ss_conf 5799999956898578887776469999877887----2786----116861688588982232648-88-089999002 Q T0582 41 ARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ----DEHG----DYPAGTYVRNPPTTSHVPGSA-EG-CTIFVKLWQ 110 (222) Q Consensus 41 g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~----d~~~----~~~~G~y~~~p~gs~H~p~s~-~G-c~~~vkl~q 110 (222) +-+...+.++|++-+.+|.++..+.+||++|.-. +.+. +..+||.+..|+|+.|--+.. ++ .++++++-. T Consensus 85 ~~~~~~~~~~P~~l~lP~~~~a~~~~yV~~G~g~~g~v~~~~~~~~~l~~GDv~~~PaG~~~~~~N~~~~e~l~ii~~~d 164 (445) T 2cav_A 85 DYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAI 164 (445) T ss_dssp TEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEE T ss_pred CEEEEEEEECCCEEECCCCCCCCEEEEEEECCEEEEEEECCCCEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEEECC T ss_conf 16999999579818677548987389999583899999699835898148878998899769999669991299999325 Q ss_pred -------C------------------CCC--------------------CCC--EEEECCCH-----------HCC---- Q ss_conf -------7------------------956--------------------656--07807613-----------506---- Q T0582 111 -------F------------------DPA--------------------DRT--QFSKNMEA-----------ELG---- 128 (222) Q Consensus 111 -------~------------------~~~--------------------d~~--~v~idt~~-----------~~~---- 128 (222) | +.+ +.. -|++.... .+. T Consensus 165 ~~n~~g~~~~F~lag~~~~~~~l~gF~~~vLa~af~v~~~~~~kl~~~~~~~g~Iv~v~~~~~~~~~~~~~~~~~~~~~~ 244 (445) T 2cav_A 165 TFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDEIEQTLLQEEQEGVIVKMPKDQIQEISKHAQSSSRKTLSS 244 (445) T ss_dssp CCSSTTCCCEEESSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCCSSSSEEECCCC------------------- T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCC T ss_conf 66776655553246775644132149989999883999999996543366663257558343443352124666677776 Q ss_pred --------------CCCCCEEEEEEECCC-------CCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEEE----C--- Q ss_conf --------------666862789872089-------84899999688974477698-86799-998778982----8--- Q T0582 129 --------------APVEGISTSLLHEDE-------RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV----N--- 178 (222) Q Consensus 129 --------------~~~~Gv~~~~L~~~~-------~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d----~--- 178 (222) .+..| .+..+.... +-.+.++.+.||+-...|.| ...|+ ||++|+... . T Consensus 245 ~~~~~nl~~~~p~~~n~~G-~~~~v~s~~~p~L~~l~ls~~~~~l~~gam~~Phwn~~A~~i~yv~~G~g~vqvv~~~~~ 323 (445) T 2cav_A 245 QDKPFNLRSRDPIYSNNYG-KLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 323 (445) T ss_dssp -CCCEETTSSCCSEESSSE-EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC--- T ss_pred CCCCCCCCCCCCCCCCCCC-EEEEECHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCC T ss_conf 5323350004986317997-699828210863101552468988617966200236886399999406178999346443 Q ss_pred -------------CCEECCCEEEECCCCCCEEEEECCCCCEEEEEE Q ss_conf -------------932168617981899802248889882999983 Q T0582 179 -------------DEVLGRNAWLRLPEGEALSATAGARGAKIWMKT 211 (222) Q Consensus 179 -------------~~~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vKT 211 (222) +..+.+|+.+..|.|..+.-.++.+--.+..+| T Consensus 324 ~~~~~~~~~~~~~~~~l~~G~vfVvP~g~~~~~~as~~~~~v~F~~ 369 (445) T 2cav_A 324 QQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAASDLNMVGIGV 369 (445) T ss_dssp --------CCEEEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEE T ss_pred CCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCEEEEEEE T ss_conf 3323356661788727659868998999915678269933999996 No 44 >3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structure initiative; 1.85A {Rhodopseudomonas palustris tie-1} Probab=98.52 E-value=3.3e-07 Score=60.03 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=59.4 Q ss_pred CCCEEEEEEECCC--CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE--ECCC--EECCCEEEECCCCCCEEEEECC- Q ss_conf 6862789872089--8489999968897447769886799-99877898--2893--2168617981899802248889- Q T0582 131 VEGISTSLLHEDE--RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VNDE--VLGRNAWLRLPEGEALSATAGA- 202 (222) Q Consensus 131 ~~Gv~~~~L~~~~--~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~--d~~~--~~~~Gs~i~~P~g~~H~~~a~~- 202 (222) ..|++...|..+. +....++.++||...+.|.|..+|+ |||+|+.. .++. .+.+||+++.|++..|+..+.. T Consensus 28 ~~g~~r~~l~~~p~~~~~~~~~~v~PG~~~~~H~H~~~e~~~Vl~G~~~~~v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~ 107 (156) T 3kgz_A 28 FQDVSRQLLFADPNLACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLVGETISDVAQGDLVFIPPMTWHQFRANRG 107 (156) T ss_dssp SEEEEEEEEECCTTCSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEECCSS T ss_pred CCCEEEEEEECCCCCCEEEEEEEECCCEECCCCCCCCCEEEEEEECEEEEECCCEEEEECCCEEEECCCCCEEEEEECCC T ss_conf 78749999871898635899999899926435468651999999785489739999980255699859998199795899 Q ss_pred CCCEE Q ss_conf 88299 Q T0582 203 RGAKI 207 (222) Q Consensus 203 ~Gc~i 207 (222) +.+.. T Consensus 108 e~l~f 112 (156) T 3kgz_A 108 DCLGF 112 (156) T ss_dssp SCEEE T ss_pred CCEEE T ss_conf 98999 No 45 >1v70_A Probable antibiotics synthesis protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.30A {Thermus thermophilus HB8} SCOP: b.82.1.9 PDB: 2dct_A Probab=98.51 E-value=4.6e-07 Score=59.13 Aligned_cols=80 Identities=23% Similarity=0.272 Sum_probs=53.6 Q ss_pred CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCC-EEE-EEEEEEEE--ECC--CEECCCEEEECCCCCCEEEEE-CCCC Q ss_conf 8627898720898489999968897447769886-799-99877898--289--321686179818998022488-8988 Q T0582 132 EGISTSLLHEDERETVTHRKLEPGANLTSEAAGG-IEV-LVLDGDVT--VND--EVLGRNAWLRLPEGEALSATA-GARG 204 (222) Q Consensus 132 ~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~G-eEi-~VLeG~l~--d~~--~~~~~Gs~i~~P~g~~H~~~a-~~~G 204 (222) +.+...+|++.++-.+.++.++||...+.|.|.+ +|+ +||+|++. .++ -.+.+||+++.|+|..|...+ +.+. T Consensus 15 ~~~~~~~l~~~~~~~~~~~~~~pG~~~~~H~H~~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~~ 94 (105) T 1v70_A 15 EKMAKIPVFQSERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEEEALLAPGMAAFAPAGAPHGVRNESASP 94 (105) T ss_dssp SSCEEEEEEEETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCEEEECCSSSC T ss_pred CCEEEEEEEECCCEEEEEEEECCCCCCCCEECCCCCEEEEEEECEEEEEEEEEEEEECCEEEEEECCCCEEEEEECCCCC T ss_conf 95699870989988999999999989867798998499999948999998166799511279994799979979999999 Q ss_pred CEEEEEE Q ss_conf 2999983 Q T0582 205 AKIWMKT 211 (222) Q Consensus 205 c~i~vKT 211 (222) |.++.-+ T Consensus 95 ~~~l~v~ 101 (105) T 1v70_A 95 ALLLVVT 101 (105) T ss_dssp EEEEEEE T ss_pred EEEEEEE T ss_conf 9999999 No 46 >3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSGXRC, structural genomics; 2.00A {Halorhodospira halophila SL1} Probab=98.48 E-value=1.3e-06 Score=56.52 Aligned_cols=79 Identities=19% Similarity=0.169 Sum_probs=59.2 Q ss_pred CCEEEEEEECCC------CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE--ECCC--EECCCEEEECCCCCCEEEEE Q ss_conf 862789872089------8489999968897447769886799-99877898--2893--21686179818998022488 Q T0582 132 EGISTSLLHEDE------RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VNDE--VLGRNAWLRLPEGEALSATA 200 (222) Q Consensus 132 ~Gv~~~~L~~~~------~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~--d~~~--~~~~Gs~i~~P~g~~H~~~a 200 (222) .|+....|..+. +-.+.++.++||...+.|.|..+|+ |||+|+.. .++. .+.+||+++.|++..|+..+ T Consensus 37 ~g~~r~~l~~~~~~~~~~~f~~~~~~l~PG~~~~~H~H~~~E~~~vl~G~g~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n 116 (167) T 3ibm_A 37 SGARRQTLVGRPAGQEAPAFETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVLDDRVEPLTPLDCVYIAPHAWHQIHA 116 (167) T ss_dssp CCEEEEEEECTTTTCCSSSEEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEETTEEEEECTTCEEEECTTCCEEEEE T ss_pred CCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEECCCEEEEEEEECEEEEEECCEEEECCCCCEEEECCCCCEEEEE T ss_conf 75379999568987668707999999869973787102102999999098999989999866899799989799699797 Q ss_pred -CCCCCEEEEE Q ss_conf -8988299998 Q T0582 201 -GARGAKIWMK 210 (222) Q Consensus 201 -~~~Gc~i~vK 210 (222) +.+.|+.|+- T Consensus 117 ~g~~e~l~flc 127 (167) T 3ibm_A 117 TGANEPLGFLC 127 (167) T ss_dssp ESSSCCEEEEE T ss_pred CCCCCCEEEEE T ss_conf 99998999999 No 47 >3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, protein structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum atcc 11170} Probab=98.45 E-value=7.3e-07 Score=57.97 Aligned_cols=76 Identities=16% Similarity=0.193 Sum_probs=57.6 Q ss_pred CCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--CCC--CCCCCCEEECCCCCCCCEECC Q ss_conf 8895579995026887057999999568985788877764699998778872--786--116861688588982232648 Q T0582 24 PMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EHG--DYPAGTYVRNPPTTSHVPGSA 99 (222) Q Consensus 24 p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~~~--~~~~G~y~~~p~gs~H~p~s~ 99 (222) +..++.|+.|-.+ ...+-...++.++||...|.|.|...|.+|||+|.... ++. ...+|++++.|+|..|..... T Consensus 36 ~~~~v~r~~l~~~-~~~~~~~~~~~v~PG~~~~~H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~ 114 (166) T 3jzv_A 36 PFRSVTRQVLFSG-NGLTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMVGRAVSAVAPYDLVTIPGWSWHQFRAP 114 (166) T ss_dssp SCEEEEEEEEECC-TTCSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEECC T ss_pred CCCCEEEEEEECC-CCCCEEEEEEEECCCCCCCCEECCCCEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEEC T ss_conf 8666179998748-997548999998999888766887808999995947797187877846997999899995985989 Q ss_pred C Q ss_conf 8 Q T0582 100 E 100 (222) Q Consensus 100 ~ 100 (222) . T Consensus 115 g 115 (166) T 3jzv_A 115 A 115 (166) T ss_dssp T T ss_pred C T ss_conf 9 No 48 >2q30_A Uncharacterized protein; YP_388795.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp} Probab=98.45 E-value=5.6e-07 Score=58.66 Aligned_cols=82 Identities=17% Similarity=0.305 Sum_probs=61.1 Q ss_pred CCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCC-CE-EEEEEEEEEE--C-CCC--CCCCCCEEECCCCCCCCE Q ss_conf 889557999502688705799999956898578887776-46-9999877887--2-786--116861688588982232 Q T0582 24 PMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDG-GE-EFIVLDGVFQ--D-EHG--DYPAGTYVRNPPTTSHVP 96 (222) Q Consensus 24 p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~-~e-e~~VL~G~~~--d-~~~--~~~~G~y~~~p~gs~H~p 96 (222) .-.++.++.|... . ... ..++.++||...|.|.|+. .| -+|||+|... . ++. ...+|++++.|+|..|.. T Consensus 18 ~~~~~~~~~l~~~-~-~~~-v~~~~l~pG~~~~~H~H~~~~e~~~~Vl~G~~~~~~~g~~~~~l~~Gd~i~~p~~~~H~~ 94 (110) T 2q30_A 18 DDQRFVMELVHES-E-NFK-IVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGDAVIPAPRGAVLVAPISTPHGV 94 (110) T ss_dssp CSSSCEEEEEEEC-S-SCE-EEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGGCEEEECTTEEEEEETTSCEEE T ss_pred CCCCEEEEEEEEC-C-CEE-EEEEEECCCCCCCCEECCCCCCEEEEEEECEEEEEECCCEEEEECCCEEEEECCCCEEEE T ss_conf 7997999998979-9-839-999999999775741389997689999959899996894878953886999989997998 Q ss_pred ECCCCEEEEEEE Q ss_conf 648880899990 Q T0582 97 GSAEGCTIFVKL 108 (222) Q Consensus 97 ~s~~Gc~~~vkl 108 (222) .+.+.|.+++-. T Consensus 95 ~~~~d~~~l~v~ 106 (110) T 2q30_A 95 RAVTDMKVLVTI 106 (110) T ss_dssp EESSSEEEEEEE T ss_pred EECCCCEEEEEE T ss_conf 989997999998 No 49 >2f4p_A Hypothetical protein TM1010; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: UNL; 1.90A {Thermotoga maritima MSB8} SCOP: b.82.1.9 Probab=98.43 E-value=2.1e-06 Score=55.23 Aligned_cols=72 Identities=28% Similarity=0.297 Sum_probs=53.7 Q ss_pred CCEEEEEEECCCCC-EEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--CC---CCCCCCCEEECCCCCCCCEE Q ss_conf 95579995026887-057999999568985788877764699998778872--78---61168616885889822326 Q T0582 26 KGVERRMLDRIGGE-VARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EH---GDYPAGTYVRNPPTTSHVPG 97 (222) Q Consensus 26 ~Gv~~~~L~~~~~e-~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~~---~~~~~G~y~~~p~gs~H~p~ 97 (222) +-|+.++|-+.... .......|+|+||+..+.|.|+..|.+|||+|.... ++ ..+.+|+.++.|+|..|.-. T Consensus 31 G~v~~~~L~~~~~~~~~~~~~~Vtf~PG~~t~~H~H~~~e~~~Vl~G~g~~~~~g~~~~~l~~GD~v~iP~gv~Hwhg 108 (147) T 2f4p_A 31 GNVWVKMLVTDENGVFNTQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERGKPARILKKGDVVEIPPNVVHWHG 108 (147) T ss_dssp SCEEEEEEECCTTCSSSCEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEETTSCCEEEETTCEEEECTTCCEEEE T ss_pred EEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECEEEEEECCCCEEEECCCCEEEECCCCCCCCC T ss_conf 789996632798887516899999899987774199988489999287999926984599639985997999944276 No 50 >3h8u_A Uncharacterized conserved protein with double- stranded beta-helix domain; YP_001338853.1, structural genomics; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp} Probab=98.42 E-value=1.2e-06 Score=56.61 Aligned_cols=61 Identities=21% Similarity=0.384 Sum_probs=26.9 Q ss_pred EEEECCCCCCCCCCCCCCEE-EEEEEEEEE--CCCC---CCCCCCEEECCCCCCCCEE--CCCCEEEEE Q ss_conf 99956898578887776469-999877887--2786---1168616885889822326--488808999 Q T0582 46 IVRYAPGSRFSAHTHDGGEE-FIVLDGVFQ--DEHG---DYPAGTYVRNPPTTSHVPG--SAEGCTIFV 106 (222) Q Consensus 46 lvr~~pG~~~p~H~H~~~ee-~~VL~G~~~--d~~~---~~~~G~y~~~p~gs~H~p~--s~~Gc~~~v 106 (222) ++.++||...|.|.|+..+| +|||+|... .+++ .+.+|+.++.|+|..|... +++.|.++. T Consensus 43 ~~~~~PG~~~~~H~H~~~~e~~~vl~G~~~~~~~dg~~~~l~~Gd~~~ip~g~~H~~~N~gde~~~~l~ 111 (125) T 3h8u_A 43 VWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVS 111 (125) T ss_dssp EEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEEECSSSCEEEEE T ss_pred EEEECCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCEEECCCEEEECCCCCEEEEEECCCCCEEEEE T ss_conf 999999978776249998799999958808996146420201322551899997997989999999999 No 51 >3fjs_A Uncharacterized protein with RMLC-like cupin fold; YP_298287.1, protein of unknown function with RMLC-like cupin fold; HET: MSE; 1.90A {Ralstonia eutropha JMP134} Probab=98.41 E-value=3.2e-07 Score=60.09 Aligned_cols=81 Identities=11% Similarity=0.140 Sum_probs=61.1 Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--C--CCCCCCCCEEECCCCCCCCEECCCC Q ss_conf 95579995026887057999999568985788877764699998778872--7--8611686168858898223264888 Q T0582 26 KGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--E--HGDYPAGTYVRNPPTTSHVPGSAEG 101 (222) Q Consensus 26 ~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~--~~~~~~G~y~~~p~gs~H~p~s~~G 101 (222) .++..+.|.+.+. -. ..++.++||...|.|.|++.+.+|||+|.+.- + .-.+.+|+.++.|+|..|...+.+. T Consensus 23 ~~~~~~~l~~~~~--~~-v~~~~l~~G~~~p~H~H~~~~~~~Vl~G~~~~~~~~~~~~l~~G~~v~ip~g~~H~~~a~~d 99 (114) T 3fjs_A 23 TQTPSAALFKEHR--LE-VMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGAQRRLHQGDLLYLGAGAAHDVNAITN 99 (114) T ss_dssp GGCCCEEEEEETT--EE-EEEEEECTTCEEEEECCSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEESSS T ss_pred CCCEEEEEEECCC--EE-EEEEEECCCCCCCCEECCCCEEEEEEECEEEEEEEEEEEECCCCEEEECCCCCEEEEEECCC T ss_conf 8837899998999--79-99999999984788899996899999499999985203985799299879999699798899 Q ss_pred EEEEEEEE Q ss_conf 08999900 Q T0582 102 CTIFVKLW 109 (222) Q Consensus 102 c~~~vkl~ 109 (222) +.+++-+- T Consensus 100 ~~~ll~vv 107 (114) T 3fjs_A 100 TSLLVTVV 107 (114) T ss_dssp EEEEEEEE T ss_pred CEEEEEEE T ss_conf 78999999 No 52 >1vj2_A Novel manganese-containing cupin TM1459; structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.65A {Thermotoga maritima} SCOP: b.82.1.10 Probab=98.40 E-value=4.8e-07 Score=59.05 Aligned_cols=77 Identities=14% Similarity=0.201 Sum_probs=57.5 Q ss_pred CCEEEEEEECCC---CCEEEEEEECCCCCCCCCCCCCEE-EEEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEE-CC Q ss_conf 862789872089---848999996889744776988679-9998778982--893--21686179818998022488-89 Q T0582 132 EGISTSLLHEDE---RETVTHRKLEPGANLTSEAAGGIE-VLVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATA-GA 202 (222) Q Consensus 132 ~Gv~~~~L~~~~---~e~v~L~r~~pG~~~p~h~h~GeE-i~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a-~~ 202 (222) .|+....|...+ +-.+.++.++||..+|.|.|..+| +||++|++.. ++. .+.+||+++.|++..|+..+ +. T Consensus 32 ~g~~~r~l~~~~~~~~~~~~~~~i~PG~~~~~H~H~~~e~~yvl~G~~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~n~~~ 111 (126) T 1vj2_A 32 RGVRKRVLIGLKDAPNFVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQGEETVEEGFYIFVEPNEIHGFRNDTD 111 (126) T ss_dssp EEEEEEEEECTTTCSSEEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCEEEECCSS T ss_pred CCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEECCCCEEEEEEECCCEEEEEEEEEEECCCEEEEECCCCEEEEEECCC T ss_conf 98799999787668955999999999989878989881999999451128981000586244799999999299998999 Q ss_pred CCCEEE Q ss_conf 882999 Q T0582 203 RGAKIW 208 (222) Q Consensus 203 ~Gc~i~ 208 (222) +.|.++ T Consensus 112 ~~~~~l 117 (126) T 1vj2_A 112 SEVEFL 117 (126) T ss_dssp SCEEEE T ss_pred CCEEEE T ss_conf 989999 No 53 >1o4t_A Putative oxalate decarboxylase; TM1287, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.95A {Thermotoga maritima} SCOP: b.82.1.9 Probab=98.37 E-value=1.2e-06 Score=56.65 Aligned_cols=53 Identities=23% Similarity=0.308 Sum_probs=25.8 Q ss_pred EEEEECCCCCCCCCCCCC-EEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEE Q ss_conf 999968897447769886-799-998778982--893--21686179818998022488 Q T0582 148 THRKLEPGANLTSEAAGG-IEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATA 200 (222) Q Consensus 148 ~L~r~~pG~~~p~h~h~G-eEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a 200 (222) ..+.++||+.++.|.|.. +|+ |||+|+... ++. .+.+||.++.|++..|+... T Consensus 60 ~~~~l~PG~~~~~H~H~~~~E~~~vl~G~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~N 118 (133) T 1o4t_A 60 ARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGKDVPIKAGDVCFTDSGESHSIEN 118 (133) T ss_dssp EEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCEEEEEC T ss_pred EEEEECCCCCCCCEECCCCEEEEEEECCCEEEEECCEEEECCCCEEEEECCCCEEEEEE T ss_conf 99999999877879889974999995583999999985066898499999989899899 No 54 >3h8u_A Uncharacterized conserved protein with double- stranded beta-helix domain; YP_001338853.1, structural genomics; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp} Probab=98.36 E-value=5.4e-06 Score=52.89 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=58.7 Q ss_pred EEEEEEECCCCCEEEEEEECCCCCCCCCCCCC-EEE-EEEEEEEEE--CC---CEECCCEEEECCCCCCEEEEE-CCCCC Q ss_conf 27898720898489999968897447769886-799-998778982--89---321686179818998022488-89882 Q T0582 134 ISTSLLHEDERETVTHRKLEPGANLTSEAAGG-IEV-LVLDGDVTV--ND---EVLGRNAWLRLPEGEALSATA-GARGA 205 (222) Q Consensus 134 v~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~G-eEi-~VLeG~l~d--~~---~~~~~Gs~i~~P~g~~H~~~a-~~~Gc 205 (222) .....|++.+...+.++.++||...+.|.|.+ .|+ +||+|++.. ++ -.+.+|+.+..|+|..|+... +.+.| T Consensus 28 ~~~~~i~~~~~~~v~~~~~~PG~~~~~H~H~~~~e~~~vl~G~~~~~~~dg~~~~l~~Gd~~~ip~g~~H~~~N~gde~~ 107 (125) T 3h8u_A 28 PIRSVVLETNDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPF 107 (125) T ss_dssp CCCEEEEECSSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEEECSSSCE T ss_pred EEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCEEECCCEEEECCCCCEEEEEECCCCCE T ss_conf 37999995999899999999997877624999879999995880899614642020132255189999799798999999 Q ss_pred EEEE Q ss_conf 9999 Q T0582 206 KIWM 209 (222) Q Consensus 206 ~i~v 209 (222) .++. T Consensus 108 ~~l~ 111 (125) T 3h8u_A 108 IFVS 111 (125) T ss_dssp EEEE T ss_pred EEEE T ss_conf 9999 No 55 >3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI- cupin, double stranded beta helix; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* Probab=98.36 E-value=1.5e-06 Score=56.20 Aligned_cols=63 Identities=17% Similarity=0.163 Sum_probs=34.8 Q ss_pred EEEEECC-CCCCCCCCCCCCEEEEEEEEEEEC--CC--CCCCCCCEEECCCCCCCCEE--CCCCEEEEEE Q ss_conf 9999568-985788877764699998778872--78--61168616885889822326--4888089999 Q T0582 45 SIVRYAP-GSRFSAHTHDGGEEFIVLDGVFQD--EH--GDYPAGTYVRNPPTTSHVPG--SAEGCTIFVK 107 (222) Q Consensus 45 ~lvr~~p-G~~~p~H~H~~~ee~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~H~p~--s~~Gc~~~vk 107 (222) .++++.| |+..|.|.|+..|-+|||+|.+.. ++ -.+.+|+.++.|+|..|+.. +++.|.++.- T Consensus 148 ~~~~i~~~G~~~p~H~H~~~e~~~vl~G~~~~~v~g~~~~l~~Gd~~~ip~~~~H~~~N~~~e~~~~l~i 217 (243) T 3h7j_A 148 MLAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243) T ss_dssp EEEEECTTTEEEEEECCSSEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEE T ss_pred EEEEECCCCCCCCCEECCCCEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCCCEEEEEE T ss_conf 9999889976588784888499999968699999999999679989998999948739189999999999 No 56 >3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, protein structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum atcc 11170} Probab=98.34 E-value=2.5e-06 Score=54.82 Aligned_cols=77 Identities=16% Similarity=0.161 Sum_probs=59.0 Q ss_pred CCEEEEEEECCC--CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE--ECCC--EECCCEEEECCCCCCEEEEECCCC Q ss_conf 862789872089--8489999968897447769886799-99877898--2893--216861798189980224888988 Q T0582 132 EGISTSLLHEDE--RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VNDE--VLGRNAWLRLPEGEALSATAGARG 204 (222) Q Consensus 132 ~Gv~~~~L~~~~--~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~--d~~~--~~~~Gs~i~~P~g~~H~~~a~~~G 204 (222) .++....|..+. ...++++.++||...+.|.|..+|+ |||+|+.. .++. .+.+||.++.|++..|+..+..+. T Consensus 38 ~~v~r~~l~~~~~~~~~~~~~~v~PG~~~~~H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~g~e 117 (166) T 3jzv_A 38 RSVTRQVLFSGNGLTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMVGRAVSAVAPYDLVTIPGWSWHQFRAPADE 117 (166) T ss_dssp EEEEEEEEECCTTCSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEECCTTS T ss_pred CCEEEEEEECCCCCCEEEEEEEECCCCCCCCEECCCCEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCC T ss_conf 66179998748997548999998999888766887808999995947797187877846997999899995985989999 Q ss_pred CEEE Q ss_conf 2999 Q T0582 205 AKIW 208 (222) Q Consensus 205 c~i~ 208 (222) .+.| T Consensus 118 pl~~ 121 (166) T 3jzv_A 118 ALGF 121 (166) T ss_dssp CEEE T ss_pred CEEE T ss_conf 9999 No 57 >3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.30A {Ruegeria pomeroyi dss-3} Probab=98.33 E-value=3.5e-06 Score=54.01 Aligned_cols=91 Identities=22% Similarity=0.295 Sum_probs=61.6 Q ss_pred CCCCEEEEEEECCCCCEEEEEEEEEECCCCCC-CCCCCCCCEE-EEEEEEEEEC--CC--CCCCCCCEEECCCCCC--CC Q ss_conf 88955799950268870579999995689857-8887776469-9998778872--78--6116861688588982--23 Q T0582 24 PMKGVERRMLDRIGGEVARATSIVRYAPGSRF-SAHTHDGGEE-FIVLDGVFQD--EH--GDYPAGTYVRNPPTTS--HV 95 (222) Q Consensus 24 p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~-p~H~H~~~ee-~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~--H~ 95 (222) +..|..++.|-...+.+.-...+++++||+.. +.|.|...|| +|||+|.... ++ -.+.+|+.++.|+|.. |+ T Consensus 25 ~~~gr~~~~lg~~~g~~~~~v~~v~l~PG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~~~~l~~Gd~~~ip~g~~~~H~ 104 (163) T 3i7d_A 25 AMDGRSSLRLGDAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQGEHPMVPGDCAAFPAGDPNGHQ 104 (163) T ss_dssp GGTTEEEEEHHHHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCCCBE T ss_pred CCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEECCCCEEEEEEEECCEEEEECCEEEECCCCCEEEEECCCCCCEE T ss_conf 46844999860467866379999999969887875387997599999979999998999998469958999598984678 Q ss_pred EE--CCCCEEEEEEEECCCCCC Q ss_conf 26--488808999900279566 Q T0582 96 PG--SAEGCTIFVKLWQFDPAD 115 (222) Q Consensus 96 p~--s~~Gc~~~vkl~q~~~~d 115 (222) .. +++-|.+|+- ....+.| T Consensus 105 ~~N~gdep~~~L~V-~t~~~~d 125 (163) T 3i7d_A 105 FVNRTDAPATFLVV-GTRTPTE 125 (163) T ss_dssp EECCSSSCEEEEEE-EECCSCE T ss_pred EEECCCCCEEEEEE-ECCCCCC T ss_conf 89599998999999-8999986 No 58 >1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein structure initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11 Probab=98.32 E-value=1.4e-05 Score=50.51 Aligned_cols=93 Identities=15% Similarity=0.055 Sum_probs=58.2 Q ss_pred EEECCCCCCEECCC-CCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCC-CCCCEEEEEEEEEEEC--CCCC--CCCCCE Q ss_conf 77056466331588-9557999502688705799999956898578887-7764699998778872--7861--168616 Q T0582 12 VIDTDQLEWRPSPM-KGVERRMLDRIGGEVARATSIVRYAPGSRFSAHT-HDGGEEFIVLDGVFQD--EHGD--YPAGTY 85 (222) Q Consensus 12 ~v~~~~~~W~~~p~-~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~-H~~~ee~~VL~G~~~d--~~~~--~~~G~y 85 (222) +.+-++.++.+.+. .++..+.+........-...++.++||+.+|.|. |...|.+|||+|.... ++.. ..+|++ T Consensus 134 ~~~~~e~~~~~~~g~~~~~~r~~~p~~~~~~~~~~~~~~~PG~~~~~~~~h~~ee~~~vl~G~g~~~i~~~~~~v~~GD~ 213 (246) T 1sfn_A 134 WGNERENPGYPFEGDDHLIARKLLPDEPAFDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKLEENYYPVTAGDI 213 (246) T ss_dssp EEETTTCCCEETTSCTTEEEEECSCCCTTCSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEETTEEEEEETTCE T ss_pred ECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCEECCCCCCCCEEEEEEECCEEEEEECCEEEEECCCCE T ss_conf 35610033447788762379971366665318999999767740022103775399999687899999999999469989 Q ss_pred EECCCCCCCCEEC--CCCEEE Q ss_conf 8858898223264--888089 Q T0582 86 VRNPPTTSHVPGS--AEGCTI 104 (222) Q Consensus 86 ~~~p~gs~H~p~s--~~Gc~~ 104 (222) ++-|++..|.-.. ++.+.. T Consensus 214 i~~~~~~~H~~~n~G~~~~~~ 234 (246) T 1sfn_A 214 IWMGAHCPQWYGALGRNWSKY 234 (246) T ss_dssp EEECTTCCEEEEEESSSCEEE T ss_pred EEECCCCCEEEEECCCCCEEE T ss_conf 998999988508289998999 No 59 >1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein structure initiative; 2.05A {Enterococcus faecalis V583} SCOP: b.82.1.11 Probab=98.32 E-value=2.9e-06 Score=54.44 Aligned_cols=57 Identities=14% Similarity=0.210 Sum_probs=29.4 Q ss_pred EEEEEEEECCCCCCC-CCCCCCCEEEEEEEEEEEC--CCC--CCCCCCEEECCCCCCCCEEC Q ss_conf 799999956898578-8877764699998778872--786--11686168858898223264 Q T0582 42 RATSIVRYAPGSRFS-AHTHDGGEEFIVLDGVFQD--EHG--DYPAGTYVRNPPTTSHVPGS 98 (222) Q Consensus 42 ~~t~lvr~~pG~~~p-~H~H~~~ee~~VL~G~~~d--~~~--~~~~G~y~~~p~gs~H~p~s 98 (222) -...++.|+||+.+| .|.|...|.+|||+|.... ++. ...+|++++.|++..|.-+. T Consensus 182 ~~~~i~~~~PG~~~~~~h~H~~ee~~~vLeG~g~~~l~~~~~~v~~GD~i~~~~~~pH~~~~ 243 (274) T 1sef_A 182 MNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNEWYPVEKGDYIFMSAYVPQAAYA 243 (274) T ss_dssp EEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEE T ss_pred EEEEEEEECCCEECCCCCCCCCCEEEEEECCEEEEEECCEEEEECCCCEEEECCCCCEEEEC T ss_conf 48999999998066653179865699998578999999999996699899989999785051 No 60 >2f4p_A Hypothetical protein TM1010; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: UNL; 1.90A {Thermotoga maritima MSB8} SCOP: b.82.1.9 Probab=98.31 E-value=6.4e-06 Score=52.44 Aligned_cols=77 Identities=17% Similarity=0.224 Sum_probs=58.4 Q ss_pred CEEEEEEECC--C--CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CC---CEECCCEEEECCCCCCEEEEECC Q ss_conf 6278987208--9--8489999968897447769886799-998778982--89---32168617981899802248889 Q T0582 133 GISTSLLHED--E--RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--ND---EVLGRNAWLRLPEGEALSATAGA 202 (222) Q Consensus 133 Gv~~~~L~~~--~--~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~---~~~~~Gs~i~~P~g~~H~~~a~~ 202 (222) -+.+..|... + .-.+..+.++||+..+.|.|.++|+ |||+|.... ++ ..+.+||.++.|+|..|..-+.. T Consensus 32 ~v~~~~L~~~~~~~~~~~~~~Vtf~PG~~t~~H~H~~~e~~~Vl~G~g~~~~~g~~~~~l~~GD~v~iP~gv~HwhgA~~ 111 (147) T 2f4p_A 32 NVWVKMLVTDENGVFNTQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERGKPARILKKGDVVEIPPNVVHWHGAAP 111 (147) T ss_dssp CEEEEEEECCTTCSSSCEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEETTSCCEEEETTCEEEECTTCCEEEEEBT T ss_pred EEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCC T ss_conf 89996632798887516899999899987774199988489999287999926984599639985997999944276589 Q ss_pred CCCEEEE Q ss_conf 8829999 Q T0582 203 RGAKIWM 209 (222) Q Consensus 203 ~Gc~i~v 209 (222) +--..+| T Consensus 112 ~~~m~~i 118 (147) T 2f4p_A 112 DEELVHI 118 (147) T ss_dssp TBCEEEE T ss_pred CCCEEEE T ss_conf 9888999 No 61 >3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum} Probab=98.28 E-value=1.4e-06 Score=56.23 Aligned_cols=56 Identities=27% Similarity=0.318 Sum_probs=30.5 Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--CC--CCCCCCCEEECCCCCCCCEECCCC Q ss_conf 9999568985788877764699998778872--78--611686168858898223264888 Q T0582 45 SIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EH--GDYPAGTYVRNPPTTSHVPGSAEG 101 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~H~p~s~~G 101 (222) .+.++.||..+| |.|+..|.+|||+|.+.- ++ -.+.+|++++.|+|+.|+-.+.+. T Consensus 43 g~~~~~PG~~~~-~~~~~dE~~~VleG~~~~~~~g~~~~~~~Gd~~~ip~g~~h~~~~~~~ 102 (119) T 3lwc_A 43 GYGRYAPGQSLT-ETMAVDDVMIVLEGRLSVSTDGETVTAGPGEIVYMPKGETVTIRSHEE 102 (119) T ss_dssp EEEEECTTCEEE-EECSSEEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCEEEEEEEEE T ss_pred EEEEECCCCCCC-CCCCCCEEEEEEEEEEEEEECCEEEEECCCCEEEECCCCEEEEEECCC T ss_conf 999999998584-069846699999829999979999997899899999999899997998 No 62 >1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A* Probab=98.26 E-value=5.1e-06 Score=53.06 Aligned_cols=55 Identities=20% Similarity=0.277 Sum_probs=42.9 Q ss_pred EEEEEECCCCCCCCCCCCCCE-EEEEEEEEEEC--CC--CCCCCCCEEECCCCCCCCEEC Q ss_conf 999995689857888777646-99998778872--78--611686168858898223264 Q T0582 44 TSIVRYAPGSRFSAHTHDGGE-EFIVLDGVFQD--EH--GDYPAGTYVRNPPTTSHVPGS 98 (222) Q Consensus 44 t~lvr~~pG~~~p~H~H~~~e-e~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~H~p~s 98 (222) ...+++.||...|.|.|...+ -+|||+|.+.. ++ -.+.+|+.++.|+|..|+-.. T Consensus 220 ~~~~~~~~g~~~~~H~H~~~~e~~~vl~G~~~~~~~~~~~~~~~Gd~~~vP~g~~H~~~~ 279 (337) T 1y3t_A 220 VVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTDGQEIQLNPGDFLHVPANTVHSYRL 279 (337) T ss_dssp EEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEE T ss_pred EEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEECCEEEEECCCCEEEECCCCCEEEEE T ss_conf 999997999888875758853899999058999999999992799889989799478695 No 63 >1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, target T1521, PSI, protein structure initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11 Probab=98.22 E-value=3.7e-06 Score=53.83 Aligned_cols=67 Identities=16% Similarity=0.237 Sum_probs=42.0 Q ss_pred CCEEEEEEECCCCCCC--CCCCCCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEE-CCCCCEEEEE Q ss_conf 8489999968897447--769886799-998778982--893--21686179818998022488-8988299998 Q T0582 144 RETVTHRKLEPGANLT--SEAAGGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATA-GARGAKIWMK 210 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p--~h~h~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a-~~~Gc~i~vK 210 (222) +-..+++.++||.... .|+++.||+ |||+|++.. ++. .+.+||+++.|++..|+... +.+.|.+++- T Consensus 58 ~f~~~~~~i~pgg~~~~~~~~~~~e~~~~Vl~G~~~~~~~g~~~~l~~Gd~~~~p~g~~h~~~N~~~~~a~~l~i 132 (261) T 1rc6_A 58 SFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLY 132 (261) T ss_dssp SSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCCCEEEECSSSCEEEEEE T ss_pred CEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCCCEEEEEE T ss_conf 369999999789724887888882899999958899999999999748989996799968999899998899999 No 64 >2b8m_A Hypothetical protein MJ0764; 1499583, structural genomics, joint center for structural genomics, JCSG; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18 Probab=98.21 E-value=5.5e-06 Score=52.85 Aligned_cols=90 Identities=14% Similarity=0.215 Sum_probs=66.8 Q ss_pred CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CC---CEECCCEEEECCCCCCEEEEECCCC- Q ss_conf 8627898720898489999968897447769886799-998778982--89---3216861798189980224888988- Q T0582 132 EGISTSLLHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--ND---EVLGRNAWLRLPEGEALSATAGARG- 204 (222) Q Consensus 132 ~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~---~~~~~Gs~i~~P~g~~H~~~a~~~G- 204 (222) .+..+..|...+.-.+.++.++||..+|.|.|..+|+ +||+|++.. ++ -.+.+||.+..|++..|+..+..+. T Consensus 14 ~~~~~~~l~~~~~~~v~~~~l~pG~~~p~H~H~~~e~~~Vl~G~~~~~~~~~e~~~~~~Gd~i~ip~~~~H~~~n~~~e~ 93 (117) T 2b8m_A 14 KTKVVEKLVNTEHVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLEDQEPHNYKEGNIVYVPFNVKMLIQNINSDI 93 (117) T ss_dssp CSCEEEEEEECSSCEEEEEEEETTCBCCCEECSSCEEEEEEESEEEEEETTSCCEEEETTCEEEECTTCEEEEECCSSSE T ss_pred CCEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCEEEEEEEEEEEEEEECCCEEEEEEEEEEEECCCCEEEEEECCCCC T ss_conf 74699996569968999999899975335538971599999717999982143179862279983399859999899985 Q ss_pred CE-EEEEECCCCCCCCCC Q ss_conf 29-999836857666788 Q T0582 205 AK-IWMKTGHLRFVRTPE 221 (222) Q Consensus 205 c~-i~vKTGHL~~~~~p~ 221 (222) +. +.+++.+=.-..+|+ T Consensus 94 l~~~~v~~P~p~~~~~~~ 111 (117) T 2b8m_A 94 LEFFVVKAPHPKKLNAPE 111 (117) T ss_dssp EEEEEEECSCGGGGCC-- T ss_pred EEEEEEECCCCCCCCCCC T ss_conf 999999897996689987 No 65 >1v70_A Probable antibiotics synthesis protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.30A {Thermus thermophilus HB8} SCOP: b.82.1.9 PDB: 2dct_A Probab=98.21 E-value=4.6e-06 Score=53.29 Aligned_cols=78 Identities=15% Similarity=0.229 Sum_probs=57.0 Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEE-EEEEEEEEEC--CC--CCCCCCCEEECCCCCCCCEEC-- Q ss_conf 9557999502688705799999956898578887776469-9998778872--78--611686168858898223264-- Q T0582 26 KGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEE-FIVLDGVFQD--EH--GDYPAGTYVRNPPTTSHVPGS-- 98 (222) Q Consensus 26 ~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee-~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~H~p~s-- 98 (222) .++.+..|...+ .. ...++.+.||...|.|.|+..+| +|||+|.... ++ -.+.+|++++.|+|..|.... T Consensus 15 ~~~~~~~l~~~~--~~-~~~~~~~~pG~~~~~H~H~~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~ 91 (105) T 1v70_A 15 EKMAKIPVFQSE--RM-LYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEEEALLAPGMAAFAPAGAPHGVRNES 91 (105) T ss_dssp SSCEEEEEEEET--TE-EEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCEEEECCS T ss_pred CCEEEEEEEECC--CE-EEEEEEECCCCCCCCEECCCCCEEEEEEECEEEEEEEEEEEEECCEEEEEECCCCEEEEEECC T ss_conf 956998709899--88-999999999989867798998499999948999998166799511279994799979979999 Q ss_pred CCCEEEEE Q ss_conf 88808999 Q T0582 99 AEGCTIFV 106 (222) Q Consensus 99 ~~Gc~~~v 106 (222) ++.+.+++ T Consensus 92 ~~~~~~l~ 99 (105) T 1v70_A 92 ASPALLLV 99 (105) T ss_dssp SSCEEEEE T ss_pred CCCEEEEE T ss_conf 99999999 No 66 >3d82_A Cupin 2, conserved barrel domain protein; YP_752209.1, domain of unknown function with A cupin fold, structural genomics; 2.05A {Shewanella frigidimarina ncimb 400} Probab=98.20 E-value=1.7e-06 Score=55.76 Aligned_cols=60 Identities=30% Similarity=0.509 Sum_probs=37.9 Q ss_pred EEEEECCCCCCCCCCCCCC-EEEEEEEEEEEC--CCC--CCCCCCEEECCCCCCCCEECCCCEEEEE Q ss_conf 9999568985788877764-699998778872--786--1168616885889822326488808999 Q T0582 45 SIVRYAPGSRFSAHTHDGG-EEFIVLDGVFQD--EHG--DYPAGTYVRNPPTTSHVPGSAEGCTIFV 106 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~-ee~~VL~G~~~d--~~~--~~~~G~y~~~p~gs~H~p~s~~Gc~~~v 106 (222) .|+++. ..+|.|.|+.. |-+|||+|...- ++. .+.+|++++.|+|..|...+.+.|.+++ T Consensus 34 ~l~~~~--g~~~~H~H~~~dE~~~Vl~G~~~~~~~~~~~~l~~Gd~v~ip~g~~H~~~a~~~~~vlv 98 (102) T 3d82_A 34 KLVKVE--GEFVWHEHADTDEVFIVMEGTLQIAFRDQNITLQAGEMYVIPKGVEHKPMAKEECKIMI 98 (102) T ss_dssp EEEEEE--EECCCBCCTTCCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCBEEEEEEEEEEEE T ss_pred EEEECC--CCCCCEECCCCEEEEEEEEEEEEEEECCEEEECCCCCEEEECCCCCEEEECCCCCEEEE T ss_conf 999889--84699899897289999987999999879999248809999999938548899958999 No 67 >2oa2_A BH2720 protein; 10175341, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.41A {Bacillus halodurans} Probab=98.19 E-value=1.5e-05 Score=50.36 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=26.1 Q ss_pred EEEEECCCCCCCCCCCCCCEE-EEEEEEEEE--CCCC--------CCCCCCEEECCCCCCCCEE Q ss_conf 999956898578887776469-999877887--2786--------1168616885889822326 Q T0582 45 SIVRYAPGSRFSAHTHDGGEE-FIVLDGVFQ--DEHG--------DYPAGTYVRNPPTTSHVPG 97 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee-~~VL~G~~~--d~~~--------~~~~G~y~~~p~gs~H~p~ 97 (222) .++.+.||...|.|.|+..+| +|||+|... .++. .+.+|+.++.|+|..|... T Consensus 46 ~~~~i~PG~~~~~H~H~~~eE~~~Vl~G~~~v~i~~~~~~l~~~~~v~~Gd~i~ip~g~~H~~~ 109 (148) T 2oa2_A 46 TLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVR 109 (148) T ss_dssp EEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEE T ss_pred EEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEECCCEEECCCCCEEEECCCCCEEEE T ss_conf 9999999999775739996589999849999999999821442050499989998999879979 No 68 >3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A Probab=98.18 E-value=2.2e-06 Score=55.22 Aligned_cols=67 Identities=18% Similarity=0.286 Sum_probs=51.2 Q ss_pred CCEEEEEEECCCCCCCCCCCCCEE-EEEEEEEEE--ECC----CEECCCEEEECCCCCCEEEEE-CCCCCEEEEE Q ss_conf 848999996889744776988679-999877898--289----321686179818998022488-8988299998 Q T0582 144 RETVTHRKLEPGANLTSEAAGGIE-VLVLDGDVT--VND----EVLGRNAWLRLPEGEALSATA-GARGAKIWMK 210 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h~GeE-i~VLeG~l~--d~~----~~~~~Gs~i~~P~g~~H~~~a-~~~Gc~i~vK 210 (222) .-.+.++.++||+.+|.|.|..+| +|||+|+.. .++ -.+.+||.++.|+|..|+... +.+.|.++.. T Consensus 38 ~f~~~~~~l~PG~~~p~H~H~~~e~~~vl~G~~~~~~~d~g~~~~l~~Gd~~~ip~g~~H~~~N~~~~~~~~l~v 112 (145) T 3ht1_A 38 RFVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVV 112 (145) T ss_dssp SEEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEEE T ss_pred EEEEEEEEECCCCCCCCEECCCCEEEEEEEEEEEEEEECCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEE T ss_conf 089999999999877699888858999999688999727978999779988872999919989899999999999 No 69 >3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, PSI-2, protein structure initiative; 2.31A {Bacteroides fragilis nctc 9343} Probab=98.15 E-value=3.1e-06 Score=54.30 Aligned_cols=70 Identities=23% Similarity=0.260 Sum_probs=39.7 Q ss_pred EEEEECCCCCEEEEEEEEEECCCCCCC-CCCCCCCEE-EEEEEEEEEC--CC--CCCCCCCEEECCCCCCCCEECC Q ss_conf 999502688705799999956898578-887776469-9998778872--78--6116861688588982232648 Q T0582 30 RRMLDRIGGEVARATSIVRYAPGSRFS-AHTHDGGEE-FIVLDGVFQD--EH--GDYPAGTYVRNPPTTSHVPGSA 99 (222) Q Consensus 30 ~~~L~~~~~e~g~~t~lvr~~pG~~~p-~H~H~~~ee-~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~H~p~s~ 99 (222) |..|...-+.++...++.+++||+..| .|.|...+| +|||+|.... ++ -...+|++++.|+|..|..... T Consensus 14 r~~l~~~~~~~g~~v~~~~l~pG~~~~~~H~H~~~~E~~~vl~G~~~~~~~~~~~~l~~Gd~v~ip~g~~H~~~n~ 89 (125) T 3cew_A 14 RVELHDSLALTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGEKIELQAGDWLRIAPDGKRQISAA 89 (125) T ss_dssp CEECHHHHTCSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTCCEEEEEB T ss_pred EEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCEEEEEEECCEEEEECCEEEEECCCCEEEECCCCCEEEEEC T ss_conf 4997336789823999999998997898879999719999991999999987902864886899889991997989 No 70 >3d82_A Cupin 2, conserved barrel domain protein; YP_752209.1, domain of unknown function with A cupin fold, structural genomics; 2.05A {Shewanella frigidimarina ncimb 400} Probab=98.14 E-value=5.9e-06 Score=52.65 Aligned_cols=72 Identities=19% Similarity=0.286 Sum_probs=54.1 Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEECCCCCEEEEE Q ss_conf 987208984899999688974477698-86799-998778982--893--216861798189980224888988299998 Q T0582 137 SLLHEDERETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATAGARGAKIWMK 210 (222) Q Consensus 137 ~~L~~~~~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vK 210 (222) ..+-+..+..+.|.++. ...+.|.| ..+|+ |||+|++.. +++ .+.+|+++..|+|..|++.+ .++|.+++- T Consensus 23 ~~v~~~~~~~v~l~~~~--g~~~~H~H~~~dE~~~Vl~G~~~~~~~~~~~~l~~Gd~v~ip~g~~H~~~a-~~~~~vlvI 99 (102) T 3d82_A 23 RVIAEMNDYQFKLVKVE--GEFVWHEHADTDEVFIVMEGTLQIAFRDQNITLQAGEMYVIPKGVEHKPMA-KEECKIMII 99 (102) T ss_dssp EEEEEETTEEEEEEEEE--EECCCBCCTTCCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCBEEEE-EEEEEEEEE T ss_pred EEEEEECCEEEEEEECC--CCCCCEECCCCEEEEEEEEEEEEEEECCEEEECCCCCEEEECCCCCEEEEC-CCCCEEEEE T ss_conf 89898289399999889--846998998972899999879999998799992488099999999385488-999589999 Q ss_pred E Q ss_conf 3 Q T0582 211 T 211 (222) Q Consensus 211 T 211 (222) + T Consensus 100 e 100 (102) T 3d82_A 100 E 100 (102) T ss_dssp E T ss_pred E T ss_conf 7 No 71 >3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum} Probab=98.12 E-value=1.9e-05 Score=49.73 Aligned_cols=67 Identities=24% Similarity=0.384 Sum_probs=50.8 Q ss_pred CCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE--ECCC--EECCCEEEECCCCCCEEEEECCCCCEEEEE Q ss_conf 98489999968897447769886799-99877898--2893--216861798189980224888988299998 Q T0582 143 ERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VNDE--VLGRNAWLRLPEGEALSATAGARGAKIWMK 210 (222) Q Consensus 143 ~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~--d~~~--~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vK 210 (222) +...+.+.+++||..++.| |..+|+ +||+|++. .++. .+.+||.++.|+|..|...+..+++++++- T Consensus 38 ~~~~~g~~~~~PG~~~~~~-~~~dE~~~VleG~~~~~~~g~~~~~~~Gd~~~ip~g~~h~~~~~~~~~~~~~v 109 (119) T 3lwc_A 38 GPITIGYGRYAPGQSLTET-MAVDDVMIVLEGRLSVSTDGETVTAGPGEIVYMPKGETVTIRSHEEGALTAYV 109 (119) T ss_dssp CCCEEEEEEECTTCEEEEE-CSSEEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCEEEEEEEEEEEEEEEE T ss_pred CCEEEEEEEECCCCCCCCC-CCCCEEEEEEEEEEEEEECCEEEEECCCCEEEECCCCEEEEEECCCCEEEEEE T ss_conf 9889999999999858406-98466999998299999799999978998999999998999979987799999 No 72 >1o4t_A Putative oxalate decarboxylase; TM1287, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.95A {Thermotoga maritima} SCOP: b.82.1.9 Probab=98.11 E-value=1.3e-05 Score=50.72 Aligned_cols=90 Identities=20% Similarity=0.142 Sum_probs=61.5 Q ss_pred CCCEECCCCCEEEEEEECCCC--CEEEEEEEEEECCCCCCCCCCCCCCEE-EEEEEEEEEC--CC--CCCCCCCEEECCC Q ss_conf 663315889557999502688--705799999956898578887776469-9998778872--78--6116861688588 Q T0582 18 LEWRPSPMKGVERRMLDRIGG--EVARATSIVRYAPGSRFSAHTHDGGEE-FIVLDGVFQD--EH--GDYPAGTYVRNPP 90 (222) Q Consensus 18 ~~W~~~p~~Gv~~~~L~~~~~--e~g~~t~lvr~~pG~~~p~H~H~~~ee-~~VL~G~~~d--~~--~~~~~G~y~~~p~ 90 (222) .++.+.-.+.+.++.|-.... ........++++||+..|.|.|+..+| +|||+|.... ++ ..+.+|++++.|+ T Consensus 31 ~~~~~Gg~g~v~~~~l~~~~~~~~~~~~~~~~~l~PG~~~~~H~H~~~~E~~~vl~G~~~~~~~~~~~~l~~Gd~i~ip~ 110 (133) T 1o4t_A 31 ISNMRGGKGEVEMAHLLSKEAMHNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGKDVPIKAGDVCFTDS 110 (133) T ss_dssp EESGGGCSSEEEEEECSCTTTTTTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETTEEEEEETTEEEEECT T ss_pred ECCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEECCCCEEEEEEECCCEEEEECCEEEECCCCEEEEECC T ss_conf 11567974479999912901269811799999999998778798899749999955839999999850668984999999 Q ss_pred CCCCCEE--CCCCEEEEEE Q ss_conf 9822326--4888089999 Q T0582 91 TTSHVPG--SAEGCTIFVK 107 (222) Q Consensus 91 gs~H~p~--s~~Gc~~~vk 107 (222) |..|.-. +++.+.+++- T Consensus 111 g~~H~~~N~g~e~~~~l~I 129 (133) T 1o4t_A 111 GESHSIENTGNTDLEFLAV 129 (133) T ss_dssp TCEEEEECCSSSCEEEEEE T ss_pred CCEEEEEECCCCCEEEEEE T ss_conf 8989989999999999999 No 73 >2p17_A Pirin-like protein; GK1651, structural genomics, southeast collaboratory for structural genomics, protein structure initiative; 1.52A {Geobacillus kaustophilus HTA426} Probab=98.09 E-value=7.6e-05 Score=46.16 Aligned_cols=164 Identities=15% Similarity=0.215 Sum_probs=99.6 Q ss_pred EEECCCCCCCCCCCCCCEE-EEEEEEEEEC--CC---CCCCCCCEEECCCC--CCCCEE-CCCCEEEEEEEEC-CCCCCC Q ss_conf 9956898578887776469-9998778872--78---61168616885889--822326-4888089999002-795665 Q T0582 47 VRYAPGSRFSAHTHDGGEE-FIVLDGVFQD--EH---GDYPAGTYVRNPPT--TSHVPG-SAEGCTIFVKLWQ-FDPADR 116 (222) Q Consensus 47 vr~~pG~~~p~H~H~~~ee-~~VL~G~~~d--~~---~~~~~G~y~~~p~g--s~H~p~-s~~Gc~~~vkl~q-~~~~d~ 116 (222) -.++|| .||.|-|.+.|- +|||+|.+.- .- +...+|+.-|--+| ..|.-. +.++-+-++-||- ++..++ T Consensus 45 ~~~~~g-gF~~HPH~g~e~vTy~~~G~~~H~DS~Gn~~~i~~G~vq~MtAG~GI~HsE~~~~~~~~~~~QiWinlP~~~k 123 (277) T 2p17_A 45 DIFERG-TFDVHPHRGIETVTYVISGELEHFDSKAGHSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWVNLPSAYK 123 (277) T ss_dssp EEECTT-CCCCEEECSEEEEEEEEESCEEEEETTTEEEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEEECCGGGT T ss_pred CCCCCC-CCCCCCCCCEEEEEEEECCEEEECCCCCCCEEECCCCEEEEECCCCEEECCCCCCCCCEEEEEEEECCCHHHC T ss_conf 224789-8989898981889999854786535899964788985799807798666024676552003442313727767 Q ss_pred C--E--EEECCCHHCCCCCCCEEEEEE-----------ECCCCCEEEEEEECCCCCCCCCCCCC--EEEEEEEEEEEECC Q ss_conf 6--0--780761350666686278987-----------20898489999968897447769886--79999877898289 Q T0582 117 T--Q--FSKNMEAELGAPVEGISTSLL-----------HEDERETVTHRKLEPGANLTSEAAGG--IEVLVLDGDVTVND 179 (222) Q Consensus 117 ~--~--v~idt~~~~~~~~~Gv~~~~L-----------~~~~~e~v~L~r~~pG~~~p~h~h~G--eEi~VLeG~l~d~~ 179 (222) . + -.+...........+..+..+ ..........+.+++|+.+......+ .-+||++|+...+. T Consensus 124 ~~~p~~~~~~~~~~p~~~~~~~~~~vi~G~~~g~~~pv~~~~~~~~~di~l~~g~~~~~~lp~~~~~~lyV~~G~~~v~~ 203 (277) T 2p17_A 124 MTEPRYQNLRSKDMPVRKEEGATIRVFSGSSKGVKAPTKNIVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFGA 203 (277) T ss_dssp TCCCEEEEECGGGSCEEEETTEEEEEEESEETTEECCCCCSSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEETT T ss_pred CCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHEEEECCCCEEEEECCCCCEEEEEEEEEEEEECC T ss_conf 89963103554469655227437998506766753662478872341067379987987659998799999951699867 Q ss_pred CE--ECCCEEEECCCCC-----CEEEEECCCCCEEEEEEC Q ss_conf 32--1686179818998-----022488898829999836 Q T0582 180 EV--LGRNAWLRLPEGE-----ALSATAGARGAKIWMKTG 212 (222) Q Consensus 180 ~~--~~~Gs~i~~P~g~-----~H~~~a~~~Gc~i~vKTG 212 (222) .. ...|+.+....+. .... ++.+++.+++-.| T Consensus 204 ~~~~~~~g~~~~~~~~~~~~~~~l~~-~a~~~a~~LL~~G 242 (277) T 2p17_A 204 DNIEGKAGQALFFSRHNRGEETELNV-TAREKLRLLLYAG 242 (277) T ss_dssp TTEEEETTEEEEECCCCTTCEEEEEE-EESSSEEEEEEEE T ss_pred CCCCCCCCEEEEEECCCCCCCEEEEE-CCCCCCEEEEEEC T ss_conf 51023345079985057775049998-0689979999978 No 74 >3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1, protein with A cupin-like fold and unknown function; HET: MSE; 1.91A {Novosphingobium aromaticivorans DSM12444} Probab=98.06 E-value=6e-05 Score=46.75 Aligned_cols=70 Identities=16% Similarity=0.311 Sum_probs=53.6 Q ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CC---CEECCCEEEECCCCCCEEEEE-CCCCCEEEE Q ss_conf 720898489999968897447769886799-998778982--89---321686179818998022488-898829999 Q T0582 139 LHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--ND---EVLGRNAWLRLPEGEALSATA-GARGAKIWM 209 (222) Q Consensus 139 L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~---~~~~~Gs~i~~P~g~~H~~~a-~~~Gc~i~v 209 (222) |....+...+++.++||...+.|.|...++ |||+|++.. ++ ..+.+||.+ .+.|..|.... +.+-|+++. T Consensus 73 ~~p~~Gt~~r~v~~pPg~~~~~Hr~~t~d~~~Vl~Gei~~~ld~ge~~~l~~GD~~-v~~gt~H~w~N~~~epa~~l~ 149 (172) T 3es1_A 73 LTLDGGSVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAF 149 (172) T ss_dssp SSTTCSEEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEE T ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEECCCCEE-EECCEEEEEEECCCCCEEEEE T ss_conf 06899747999884799866662089741799998099999814311896499989-689947997999989799999 No 75 >2fqp_A Hypothetical protein BP2299; NP_880937.1, structural genomics, joint center for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I} Probab=98.04 E-value=1.8e-05 Score=49.82 Aligned_cols=64 Identities=20% Similarity=0.276 Sum_probs=29.6 Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCCCC-CEEE-EEEEEEEEE--CCC----EECCCEEEECCCCCCEEEE Q ss_conf 89872089848999996889744776988-6799-998778982--893----2168617981899802248 Q T0582 136 TSLLHEDERETVTHRKLEPGANLTSEAAG-GIEV-LVLDGDVTV--NDE----VLGRNAWLRLPEGEALSAT 199 (222) Q Consensus 136 ~~~L~~~~~e~v~L~r~~pG~~~p~h~h~-GeEi-~VLeG~l~d--~~~----~~~~Gs~i~~P~g~~H~~~ 199 (222) ...|.+++.-++..+.++||..++.|.|. ..|+ +|++|.+.. +++ .+.+|++++.|+|..|+.. T Consensus 9 ~tvl~en~~~~V~~~~i~PG~~~~~H~H~~~~~~~~v~~G~~~v~~~~~~~~~~~~~G~~~~~p~g~~H~v~ 80 (97) T 2fqp_A 9 PTVQIDNERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVI 80 (97) T ss_dssp EEEEEESSSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEE T ss_pred EEEEEECCCEEEEEEEECCCCCCCCEECCCCEEEEEEECCEEEEEECCCCEEECCCCCEEEEEECCCCEEEE T ss_conf 799996897899999998999067317778869999986799999768717830567679999099829929 No 76 >1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 Probab=98.04 E-value=0.00032 Score=42.47 Aligned_cols=188 Identities=17% Similarity=0.197 Sum_probs=110.8 Q ss_pred CCCEEEEEEEC--CCCCEEEEEEE--EEECCCCCCCCCCCCCCEEE-EEEEE-EEE--CC---CCCCCCCCEEECCCC-- Q ss_conf 89557999502--68870579999--99568985788877764699-99877-887--27---861168616885889-- Q T0582 25 MKGVERRMLDR--IGGEVARATSI--VRYAPGSRFSAHTHDGGEEF-IVLDG-VFQ--DE---HGDYPAGTYVRNPPT-- 91 (222) Q Consensus 25 ~~Gv~~~~L~~--~~~e~g~~t~l--vr~~pG~~~p~H~H~~~ee~-~VL~G-~~~--d~---~~~~~~G~y~~~p~g-- 91 (222) ..|+..+++-- .-...+-+..| .+.+++..||.|-|.+.|-+ |||+| .+. |. .+.+.+|+.-+--+| T Consensus 19 g~G~~v~R~~~~~~~~~~~Pf~~~d~~~~~~~~gf~~HPH~g~e~vTy~l~G~~~~H~DS~G~~~~i~~G~vq~mtAG~G 98 (290) T 1j1l_A 19 GVGARVRRSIGRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHEDFCGHTGKMNPGDLQWMTAGRG 98 (290) T ss_dssp TBTEEEEECTTSTTCCCCTTEEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEEETTSCEEEECTTCEEEEECTTC T ss_pred CCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCEEEECCCCCCCEEECCCCEEEEECCCC T ss_conf 69879996279887554587699764767889979998969828999999686588637899853588996699837898 Q ss_pred CCCCEE-CCCCEEEEEEEECCCCCCCC----E-EEECCCHHCCCCCCCEEEEEE-----------ECCCCCEEEEEEECC Q ss_conf 822326-48880899990027956656----0-780761350666686278987-----------208984899999688 Q T0582 92 TSHVPG-SAEGCTIFVKLWQFDPADRT----Q-FSKNMEAELGAPVEGISTSLL-----------HEDERETVTHRKLEP 154 (222) Q Consensus 92 s~H~p~-s~~Gc~~~vkl~q~~~~d~~----~-v~idt~~~~~~~~~Gv~~~~L-----------~~~~~e~v~L~r~~p 154 (222) ..|.-. +..+-+-++-+|-..+.+.. . -.+...........+....++ .......++-+++++ T Consensus 99 I~HsE~~~~~~~~~~lQiWinlp~~~k~~~P~y~~~~~~~iP~~~~~~~~~~vi~G~~~g~~~pi~~~~~~~~~di~l~~ 178 (290) T 1j1l_A 99 ILHAEMPCSEEPAHGLQLWVNLRSSEKMVEPQYQELKSEEIPKPSKDGVTVAVISGEALGIKSKVYTRTPTLYLDFKLDP 178 (290) T ss_dssp EEEEEEECSSSCEEEEEEEEECCGGGTTSCCEEEEECGGGSCCCEETTEEEEEEESEETTEECCCCCSSCEEEEEEEECT T ss_pred EEEECCCCCCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECC T ss_conf 07857888778633899996588677768864456663345146137825886125436732310027873589987158 Q ss_pred CCCCCCCCCCC--EEEEEEEEEEEECCC----EECCCEEEECCCCCCEEEEE-CCCCCEEEEEEC Q ss_conf 97447769886--799998778982893----21686179818998022488-898829999836 Q T0582 155 GANLTSEAAGG--IEVLVLDGDVTVNDE----VLGRNAWLRLPEGEALSATA-GARGAKIWMKTG 212 (222) Q Consensus 155 G~~~p~h~h~G--eEi~VLeG~l~d~~~----~~~~Gs~i~~P~g~~H~~~a-~~~Gc~i~vKTG 212 (222) |+.+......+ .-+||++|++..+.. ...+++.+....+..-...+ +.++|.+++-.| T Consensus 179 g~~~~~~l~~~~~~~iyvi~G~~~i~~~~~~~~v~~~~~~~l~~gd~~~i~~~~~~~a~~LLl~G 243 (290) T 1j1l_A 179 GAKHSQPIPKGWTSFIYTISGDVYIGPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLIAG 243 (290) T ss_dssp TCEEEEECCTTCEEEEEEEESCEEESCTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEEEEE T ss_pred CCEEEEECCCCCCEEEEEEEEEEEECCCCCCCEECCCEEEEECCCCEEEEEECCCCCCEEEEEEC T ss_conf 81389855888706999997069874653330305744999749984999947988988999977 No 77 >3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural genomics, joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans} Probab=98.03 E-value=7.9e-06 Score=51.93 Aligned_cols=80 Identities=23% Similarity=0.227 Sum_probs=51.6 Q ss_pred EEEEEEECCCCCEEEEEEEEEECCCCC-CCCCCCCCCEE-EEEEEEEEEC--CC--CCCCCCCEEECCCCCC-CCEE--C Q ss_conf 579995026887057999999568985-78887776469-9998778872--78--6116861688588982-2326--4 Q T0582 28 VERRMLDRIGGEVARATSIVRYAPGSR-FSAHTHDGGEE-FIVLDGVFQD--EH--GDYPAGTYVRNPPTTS-HVPG--S 98 (222) Q Consensus 28 v~~~~L~~~~~e~g~~t~lvr~~pG~~-~p~H~H~~~ee-~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~-H~p~--s 98 (222) -.++.|....+...-...+++++||+. .+.|.|...|| +|||+|.... ++ -.+.+|++++.|+++. |.-. + T Consensus 32 r~~~~lg~~~G~~~~~v~~~~l~PG~~s~~~h~h~~~eE~~~Vl~G~~~~~~~~~~~~l~~GD~v~~p~~~~~H~~~N~g 111 (162) T 3l2h_A 32 RVNKSLGDAVGLRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMENDQYPIAPGDFVGFPCHAAAHSISNDG 111 (162) T ss_dssp EEEEEHHHHHTCCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCCEEEECCS T ss_pred EEEEEECCCCCCCEEEEEEEEECCCCCCCCCEECCCCEEEEEEECCEEEEEECCEEEEECCCCEEEECCCCEEEEEECCC T ss_conf 89887144568864899999999998977361659972999999298999999999995599589988998088858499 Q ss_pred CCCEEEEEE Q ss_conf 888089999 Q T0582 99 AEGCTIFVK 107 (222) Q Consensus 99 ~~Gc~~~vk 107 (222) ++-|.+++- T Consensus 112 ~e~l~~L~V 120 (162) T 3l2h_A 112 TETLVCLVI 120 (162) T ss_dssp SSCEEEEEE T ss_pred CCCEEEEEE T ss_conf 888999999 No 78 >2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A Probab=98.02 E-value=0.00038 Score=42.08 Aligned_cols=188 Identities=13% Similarity=0.164 Sum_probs=111.4 Q ss_pred CCEECCCCCEEEEEEECCCCCE----E---EEEEEEEECCCCCCCCCCCCCCEEEEEEEEEE----ECCCC----CCCCC Q ss_conf 6331588955799950268870----5---79999995689857888777646999987788----72786----11686 Q T0582 19 EWRPSPMKGVERRMLDRIGGEV----A---RATSIVRYAPGSRFSAHTHDGGEEFIVLDGVF----QDEHG----DYPAG 83 (222) Q Consensus 19 ~W~~~p~~Gv~~~~L~~~~~e~----g---~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~----~d~~~----~~~~G 83 (222) .|+.+ ..-..++|.+.+..+ + -...++++.|.+-+-+|.-+...-+||++|.- .+.+. +..+| T Consensus 33 ~~~~~--~~G~irvl~~F~~~s~~~~~~~~yrv~~~~~~P~~l~lP~~~dA~~l~yV~qG~g~vg~v~pg~~et~~l~~G 110 (434) T 2ea7_A 33 TLYRN--EWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQG 110 (434) T ss_dssp EEEEE--TTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETT T ss_pred EEEEC--CCCEEEEECCCCCCCHHHCCCCCEEEEEEEECCCEEECCCCCCCCEEEEEEECEEEEEEEECCCCEEEEECCC T ss_conf 02765--8945986435120063334763238999997898461677679983899991879999997998327980689 Q ss_pred CEEECCCCCCCCEECC-CC-EEEEEEEEC-------C------------------CCC--------------------CC Q ss_conf 1688588982232648-88-089999002-------7------------------956--------------------65 Q T0582 84 TYVRNPPTTSHVPGSA-EG-CTIFVKLWQ-------F------------------DPA--------------------DR 116 (222) Q Consensus 84 ~y~~~p~gs~H~p~s~-~G-c~~~vkl~q-------~------------------~~~--------------------d~ 116 (222) |-+..|+|+.|--+.. ++ -+.++++-. | +.+ ++ T Consensus 111 DV~~iPAG~~~~l~N~~~~e~L~iv~l~d~~n~~~q~~~F~lag~~~~~s~~sgFs~evLa~aF~v~~e~i~kl~~~~~~ 190 (434) T 2ea7_A 111 HAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRGFSKNILEASFDSDFKEINRVLFGEER 190 (434) T ss_dssp EEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHTCC-- T ss_pred CEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCHHHHHHHHCCCCC T ss_conf 87998899758999469996689999973688855354332578867663311499899998849988999875424344 Q ss_pred C----------EEEECCCH-------------HCC------------------CCCCCEEEEEEECCC-------CCEEE Q ss_conf 6----------07807613-------------506------------------666862789872089-------84899 Q T0582 117 T----------QFSKNMEA-------------ELG------------------APVEGISTSLLHEDE-------RETVT 148 (222) Q Consensus 117 ~----------~v~idt~~-------------~~~------------------~~~~Gv~~~~L~~~~-------~e~v~ 148 (222) . .+.+.... .+. .+..| .+..+...+ +-.+. T Consensus 191 ~~~~~~~~~~~~~i~~~~~eq~~e~~~~~~~~~~~~~~~~~~~~nl~~~~p~ysn~~G-r~~~v~~~~~P~L~~l~lsa~ 269 (434) T 2ea7_A 191 QQQQGEESREEGVIVELKREQIQELMKHAKSSSRKELSSQDEPFNLRNSKPIYSNKFG-RWYEMTPEKNPQLKDLDVFIS 269 (434) T ss_dssp -------CCCSSSEEECCHHHHHHHHTTSBCCCSSCTTCSSSCEETTSSCCSEEETTE-EEEEECTTTCHHHHHHTEEEE T ss_pred CCCEEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC-EEEECCCCCCCCCCCCCEEEE T ss_conf 4540220355552215666777777511666788877777763212026987327898-689707111865432550479 Q ss_pred EEEECCCCCCCCCCC-CCEEE-EEEEEEEEE----CC------------------CEECCCEEEECCCCCCEEEEECCCC Q ss_conf 999688974477698-86799-998778982----89------------------3216861798189980224888988 Q T0582 149 HRKLEPGANLTSEAA-GGIEV-LVLDGDVTV----ND------------------EVLGRNAWLRLPEGEALSATAGARG 204 (222) Q Consensus 149 L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d----~~------------------~~~~~Gs~i~~P~g~~H~~~a~~~G 204 (222) ++.+.||+-+..|.| ...|+ ||++|+-.. .. ..+.+|+.+..|.|..+...|+. + T Consensus 270 ~v~L~~GAM~~PHwn~nA~ei~yV~rG~grvq~v~~~g~~~~~~~~~~~~~~~f~~~l~~G~vfVvP~g~p~~~~as~-~ 348 (434) T 2ea7_A 270 SVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATS-N 348 (434) T ss_dssp EEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESS-S T ss_pred EEEECCCCEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEECCC-C T ss_conf 998737834256116898789999837179999768987410023456522677617868868999899926788179-8 Q ss_pred CEEEE--EE Q ss_conf 29999--83 Q T0582 205 AKIWM--KT 211 (222) Q Consensus 205 c~i~v--KT 211 (222) +.|| +| T Consensus 349 -l~~v~F~t 356 (434) T 2ea7_A 349 -LNFFAFGI 356 (434) T ss_dssp -EEEEEEEE T ss_pred -CEEEEEEE T ss_conf -07999996 No 79 >3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, PSI-2, protein structure initiative; 2.31A {Bacteroides fragilis nctc 9343} Probab=98.01 E-value=2.4e-05 Score=49.14 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=55.0 Q ss_pred CCCCCEEEEEEECCCCCCC-CCCCCC-EEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEECCC-CCEEE-EEE Q ss_conf 0898489999968897447-769886-799-998778982--893--21686179818998022488898-82999-983 Q T0582 141 EDERETVTHRKLEPGANLT-SEAAGG-IEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATAGAR-GAKIW-MKT 211 (222) Q Consensus 141 ~~~~e~v~L~r~~pG~~~p-~h~h~G-eEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a~~~-Gc~i~-vKT 211 (222) ...+..+.+..++||+.+| .|.|.. +|+ +||+|.... ++. .+.+||++..|+|..|+..+..+ .+.++ |.+ T Consensus 22 ~~~g~~v~~~~l~pG~~~~~~H~H~~~~E~~~vl~G~~~~~~~~~~~~l~~Gd~v~ip~g~~H~~~n~~~~~~~~l~v~~ 101 (125) T 3cew_A 22 ALTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGEKIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQV 101 (125) T ss_dssp TCSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEE T ss_pred CCCCEEEEEEEECCCCCCCCCEECCCCCEEEEEEECCEEEEECCEEEEECCCCEEEECCCCCEEEEECCCCCEEEEEEEE T ss_conf 89823999999998997898879999719999991999999987902864886899889991997989999999999998 Q ss_pred CCC Q ss_conf 685 Q T0582 212 GHL 214 (222) Q Consensus 212 GHL 214 (222) +-. T Consensus 102 ~~~ 104 (125) T 3cew_A 102 KAG 104 (125) T ss_dssp ETT T ss_pred CCC T ss_conf 998 No 80 >1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A* Probab=98.00 E-value=0.00052 Score=41.28 Aligned_cols=165 Identities=15% Similarity=0.153 Sum_probs=103.2 Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEEE----ECCC----CCCCCCCEEECCCCCCCCEECC-CC-EEEEEEEEC---- Q ss_conf 99995689857888777646999987788----7278----6116861688588982232648-88-089999002---- Q T0582 45 SIVRYAPGSRFSAHTHDGGEEFIVLDGVF----QDEH----GDYPAGTYVRNPPTTSHVPGSA-EG-CTIFVKLWQ---- 110 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee~~VL~G~~----~d~~----~~~~~G~y~~~p~gs~H~p~s~-~G-c~~~vkl~q---- 110 (222) .++++.|++-+-+|..+...-+||++|.- .+.+ .+...||-+..|+|+.|--+.. ++ .+.++++-. T Consensus 52 ~~~~~~P~~l~lP~~~nA~~l~yV~qGrg~ig~V~p~~~es~~l~~GDV~~iPAG~~~~~~N~gd~e~l~iv~l~~~~n~ 131 (416) T 1uij_A 52 VQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNK 131 (416) T ss_dssp EEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSB T ss_pred EEEEECCCCEECCCCCCCCEEEEEEECEEEEEEEECCCEEEEECCCCCEEEECCCCEEEEEECCCCCCEEEEEEECCCCC T ss_conf 99997798276776479986999991889999996897468861688779978996699995799976899997316777 Q ss_pred ---CCC----C----------------------------------C-C-CE-----EEECCCHH----------CC---- Q ss_conf ---795----6----------------------------------6-5-60-----78076135----------06---- Q T0582 111 ---FDP----A----------------------------------D-R-TQ-----FSKNMEAE----------LG---- 128 (222) Q Consensus 111 ---~~~----~----------------------------------d-~-~~-----v~idt~~~----------~~---- 128 (222) |+. + + + .+ +.+..... ++ T Consensus 132 ~~~~~~F~lag~~~~~silsgFs~evLa~AF~v~~e~i~rl~~~~~~~~~~~~~~iv~~~~eq~~~~~~~~~~~~~~~~~ 211 (416) T 1uij_A 132 PGRYDDFFLSSTQAQQSYLQGFSHNILETSFHSEFEEINRVLFGEEEEQRQQEGVIVELSKEQIRQLSRRAKSSSRKTIS 211 (416) T ss_dssp TTBCCEEESSCBSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHTCTTCGGGSBSSSEEECCHHHHHHHTSSCBCCCGGGGG T ss_pred CCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCCC T ss_conf 55444342467767664422399899998839999999975443221344244305456723022312234577666677 Q ss_pred ---------------CCCCCEEEEEEECCC-------CCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEEE----CC- Q ss_conf ---------------666862789872089-------84899999688974477698-86799-998778982----89- Q T0582 129 ---------------APVEGISTSLLHEDE-------RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV----ND- 179 (222) Q Consensus 129 ---------------~~~~Gv~~~~L~~~~-------~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d----~~- 179 (222) .+..| .+..+...+ +-.+.++.+.+|+-+..|.| ...|| ||++|+-.. .. T Consensus 212 ~~~~~~nl~~~~p~~~n~~G-r~~~v~~~~~p~L~~l~lsa~~v~L~~gam~~PHwn~nA~~i~yV~~G~grvqvV~~~g 290 (416) T 1uij_A 212 SEDEPFNLRSRNPIYSNNFG-KFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKE 290 (416) T ss_dssp CSSSCEETTSSCCSEECSSE-EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC- T ss_pred CCCCCCCCCCCCCCCCCCCC-EEEEECCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCEEEEEECCEEEEEEECCCC T ss_conf 77877361126886247898-69971722276433466168999961796763002577738999970548999974888 Q ss_pred ------------------CEECCCEEEECCCCCCEEEEECCCCCEEE--EEEC Q ss_conf ------------------32168617981899802248889882999--9836 Q T0582 180 ------------------EVLGRNAWLRLPEGEALSATAGARGAKIW--MKTG 212 (222) Q Consensus 180 ------------------~~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~--vKTG 212 (222) +.+.+|+.+..|.+......|+ ++ +.| .||- T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~G~v~vVPq~~p~~~~A~-~~-~~~v~F~tn 341 (416) T 1uij_A 291 QQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT-SN-LNFLAFGIN 341 (416) T ss_dssp -----------CCEEEEEEEEETTCEEEECTTCCEEEEES-SS-EEEEEEEET T ss_pred CCCHHHHCCCCCCEEEEEEEECCCCEEEECCCCCEEEECC-CC-CEEEEEEEC T ss_conf 7530111025663288863887987899899991779817-99-279999950 No 81 >3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1, protein with A cupin-like fold and unknown function; HET: MSE; 1.91A {Novosphingobium aromaticivorans DSM12444} Probab=97.98 E-value=6.6e-05 Score=46.51 Aligned_cols=99 Identities=17% Similarity=0.168 Sum_probs=68.2 Q ss_pred EEEEECC-CCCCEECCCCCEEEEEEECC--------------------CCCEEEEEEEEEECCCCCCCCCCCCCCEEEEE Q ss_conf 1677056-46633158895579995026--------------------88705799999956898578887776469999 Q T0582 10 PVVIDTD-QLEWRPSPMKGVERRMLDRI--------------------GGEVARATSIVRYAPGSRFSAHTHDGGEEFIV 68 (222) Q Consensus 10 ~~~v~~~-~~~W~~~p~~Gv~~~~L~~~--------------------~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~V 68 (222) ++++..+ ..+....+.++..+..++.. ....|..-.++.|+||...|.|+|+..+-+|| T Consensus 26 ksi~~sd~~~p~~~~~~~~~~~~~iw~T~~~P~~~~~~~d~~~~~~~~~p~~Gt~~r~v~~pPg~~~~~Hr~~t~d~~~V 105 (172) T 3es1_A 26 RAVFKSEDVTPTRMIPSGDASFLLVWTTATVPADNNDETDGRQREAGLTLDGGSVIRVVDMLPGKESPMHRTNSIDYGIV 105 (172) T ss_dssp CEEEEEEEEECCEECTTSSEEEEEEEEESSSSCCTTCCCCGGGCCCCSSTTCSEEEEEEEECTTCBCCCBCCSEEEEEEE T ss_pred CEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEE T ss_conf 79997388888624179972699968358878666785542335652068997479998847998666620897417999 Q ss_pred EEEEEEC--CC---CCCCCCCEEECCCCCCCCEE--CCCCEEEEEEEE Q ss_conf 8778872--78---61168616885889822326--488808999900 Q T0582 69 LDGVFQD--EH---GDYPAGTYVRNPPTTSHVPG--SAEGCTIFVKLW 109 (222) Q Consensus 69 L~G~~~d--~~---~~~~~G~y~~~p~gs~H~p~--s~~Gc~~~vkl~ 109 (222) |+|.+.- ++ ..+.+|+.+. +.|..|+-+ |++-|.++.-+- T Consensus 106 l~Gei~~~ld~ge~~~l~~GD~~v-~~gt~H~w~N~~~epa~~l~V~~ 152 (172) T 3es1_A 106 LEGEIELELDDGAKRTVRQGGIIV-QRGTNHLWRNTTDKPCRIAFILI 152 (172) T ss_dssp EESCEEEECGGGCEEEECTTCEEE-ECSCCBEEECCSSSCEEEEEEEE T ss_pred EEEEEEEEECCCCCEEECCCCEEE-ECCEEEEEEECCCCCEEEEEEEE T ss_conf 980999998143118964999896-89947997999989799999991 No 82 >2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A Probab=97.98 E-value=2.7e-05 Score=48.84 Aligned_cols=62 Identities=19% Similarity=0.278 Sum_probs=32.6 Q ss_pred EEEEECCCCC--CCCCCCCCCEE-EEEEEEEEEC--CC--CCCCCCCEEECCCCCCCCEE--CCCCEEEEE Q ss_conf 9999568985--78887776469-9998778872--78--61168616885889822326--488808999 Q T0582 45 SIVRYAPGSR--FSAHTHDGGEE-FIVLDGVFQD--EH--GDYPAGTYVRNPPTTSHVPG--SAEGCTIFV 106 (222) Q Consensus 45 ~lvr~~pG~~--~p~H~H~~~ee-~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~H~p~--s~~Gc~~~v 106 (222) ..+.++||.. .|.|.|+..+| +||++|.... ++ -.+.+|+.++.|+|..|... +++-+.+++ T Consensus 24 ~~~~v~PG~~~~~~~H~H~~~~E~~~vi~G~~~~~~~~~~~~l~~Gd~~~vp~~~~H~~~N~g~~~~~~l~ 94 (113) T 2gu9_A 24 AEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVN 94 (113) T ss_dssp EEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEE T ss_pred EEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEECCCCEEEECCCCCEEEEEECCCCCEEEEE T ss_conf 99999698888886548899839999998989999899978612571689299997996999999999999 No 83 >2o8q_A Hypothetical protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans LB400} Probab=97.97 E-value=4.9e-05 Score=47.28 Aligned_cols=115 Identities=24% Similarity=0.296 Sum_probs=71.7 Q ss_pred CCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEE---CCCCCEEEEEEEEEECCCCC--CCCCCCCCC-EEEEEEEEEEE Q ss_conf 9515677841677056466331588955799950---26887057999999568985--788877764-69999877887 Q T0582 1 MEINADFTKPVVIDTDQLEWRPSPMKGVERRMLD---RIGGEVARATSIVRYAPGSR--FSAHTHDGG-EEFIVLDGVFQ 74 (222) Q Consensus 1 m~~~~d~~~~~~v~~~~~~W~~~p~~Gv~~~~L~---~~~~e~g~~t~lvr~~pG~~--~p~H~H~~~-ee~~VL~G~~~ 74 (222) ||+..-+++ -..+...|.+..-.+...+-|- ..++. ....++|..||.. .+.|.|... |-+|||+|... T Consensus 2 ~~~~~~~~h---~~~~~~~~~~g~R~~f~yRdlGi~~aT~G~--~~~~vir~~~~~~~~~~~H~H~~~~e~~~Vl~G~~~ 76 (134) T 2o8q_A 2 MKLQTTIQH---EPKDGSGFDRGLREFFEYRDTGVNEATGGM--FGAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVE 76 (134) T ss_dssp CCCCCEEEC---CCTTSCCCBC--CTTEEEEECSHHHHHTTS--CEEEEEEECC-----CCCEEECCSCEEEEEEESEEE T ss_pred CCEEEEEEE---CCCCCCCCCCCCCCCEEEECCCCCCCCCCE--EEEEEEEECCCCCCCCCEEECCCCCEEEEEEEEEEE T ss_conf 633699983---467756335542174881105563156984--899999988899998850788997299999962899 Q ss_pred --CCC-C--CCCCCCEEECCCCCCCCEE--CCCCEEEEEEEECCCCCCCCEEEECCC Q ss_conf --278-6--1168616885889822326--488808999900279566560780761 Q T0582 75 --DEH-G--DYPAGTYVRNPPTTSHVPG--SAEGCTIFVKLWQFDPADRTQFSKNME 124 (222) Q Consensus 75 --d~~-~--~~~~G~y~~~p~gs~H~p~--s~~Gc~~~vkl~q~~~~d~~~v~idt~ 124 (222) .++ + .+.+|++++.|+|..|... |+ .+.++... .+.+-....+|.. T Consensus 77 ~~~~g~~~~~l~~GD~i~iP~g~~H~~~n~s~-d~e~LeI~---~P~~~~t~~~d~~ 129 (134) T 2o8q_A 77 FEYEDIGAVMLEAGGSAFQPPGVRHRELRHSD-DLEVLEIV---SPAGFATSVVDLE 129 (134) T ss_dssp EEETTTEEEEEETTCEEECCTTCCEEEEEECT-TCEEEEEE---SSTTCCEEECCCC T ss_pred EEEECCCEEECCCCCEEEECCCCEEEEEECCC-CEEEEEEE---CCCCCCCEECCCC T ss_conf 99908767975899989968989595797899-97999999---9997413871332 No 84 >1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protein structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11 Probab=97.96 E-value=6e-05 Score=46.76 Aligned_cols=68 Identities=10% Similarity=0.286 Sum_probs=49.0 Q ss_pred CCEEEEEEECCCCC--CCCCCCCCEEE-EEEEEEEE--ECCC--EECCCEEEECCCCCCEEEEE-CCCCCEEE-EEE Q ss_conf 84899999688974--47769886799-99877898--2893--21686179818998022488-89882999-983 Q T0582 144 RETVTHRKLEPGAN--LTSEAAGGIEV-LVLDGDVT--VNDE--VLGRNAWLRLPEGEALSATA-GARGAKIW-MKT 211 (222) Q Consensus 144 ~e~v~L~r~~pG~~--~p~h~h~GeEi-~VLeG~l~--d~~~--~~~~Gs~i~~P~g~~H~~~a-~~~Gc~i~-vKT 211 (222) .-..+++.++||.. .|.|+|+.||+ |||+|++. .++. .+.+||+++.|+|..|+... +.+.|.++ ||. T Consensus 67 ~F~~y~v~i~Pgg~~~~p~~~~~~E~~~~Vl~G~~~~~~~g~~~~l~~Gd~~~~p~g~~h~~~N~~~~~~~~~~i~~ 143 (278) T 1sq4_A 67 TFSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIRK 143 (278) T ss_dssp SCEEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSCEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEE T ss_pred CEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCCCEEEEEEEC T ss_conf 42799999978985677778888589999997989999999999925999999799995898978999899999984 No 85 >2oa2_A BH2720 protein; 10175341, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.41A {Bacillus halodurans} Probab=97.95 E-value=4.3e-05 Score=47.62 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=59.8 Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCCCC-CEEE-EEEEEEEEE--CCC--------EECCCEEEECCCCCCEEEEE-CC Q ss_conf 89872089848999996889744776988-6799-998778982--893--------21686179818998022488-89 Q T0582 136 TSLLHEDERETVTHRKLEPGANLTSEAAG-GIEV-LVLDGDVTV--NDE--------VLGRNAWLRLPEGEALSATA-GA 202 (222) Q Consensus 136 ~~~L~~~~~e~v~L~r~~pG~~~p~h~h~-GeEi-~VLeG~l~d--~~~--------~~~~Gs~i~~P~g~~H~~~a-~~ 202 (222) ...|+..+..++.++.++||..++.|.|. .+|+ |||+|++.. ++. .+.+|+.+..|+|..|+... +. T Consensus 34 r~~l~~g~~~qv~~~~i~PG~~~~~H~H~~~eE~~~Vl~G~~~v~i~~~~~~l~~~~~v~~Gd~i~ip~g~~H~~~N~gd 113 (148) T 2oa2_A 34 RRALWTGDHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGN 113 (148) T ss_dssp EEEEEECSSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSS T ss_pred EEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEECCCEEECCCCCEEEECCCCCEEEEECCC T ss_conf 89999799779999999999997757399965899998499999999998214420504999899989998799797999 Q ss_pred CCCEEEEE Q ss_conf 88299998 Q T0582 203 RGAKIWMK 210 (222) Q Consensus 203 ~Gc~i~vK 210 (222) +-+.+|.- T Consensus 114 epl~~l~i 121 (148) T 2oa2_A 114 RPLKLYSI 121 (148) T ss_dssp SCEEEEEE T ss_pred CCEEEEEE T ss_conf 99899999 No 86 >2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae} Probab=97.90 E-value=4.4e-05 Score=47.53 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=59.6 Q ss_pred CCEEEEEEECCC--CCEEEEEEECCCCCC--CCCCCCCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEE-C Q ss_conf 862789872089--848999996889744--7769886799-998778982--893--21686179818998022488-8 Q T0582 132 EGISTSLLHEDE--RETVTHRKLEPGANL--TSEAAGGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATA-G 201 (222) Q Consensus 132 ~Gv~~~~L~~~~--~e~v~L~r~~pG~~~--p~h~h~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a-~ 201 (222) .+.....++... .-...++.++||... +.|.|.++|+ |||+|++.. ++. .+.+||.++.|++..|+... + T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~l~pg~~~~~~~h~h~~~e~~~Vl~G~~~v~~~~~~~~l~~Gd~~~~~~~~~h~~~N~~ 152 (166) T 2vpv_A 73 ENFALEIMFDKHKEYFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKNKFLSVKGSTFQIPAFNEYAIANRG 152 (166) T ss_dssp CBCCCCEECCTTTCSCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCEEEEEECS T ss_pred CCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEECCCCEEEECCCCEEEEEECC T ss_conf 82799774178888337799999999945876535776799999972999998968999799989998898949989799 Q ss_pred CCCCEEEEE Q ss_conf 988299998 Q T0582 202 ARGAKIWMK 210 (222) Q Consensus 202 ~~Gc~i~vK 210 (222) .+.|.++.- T Consensus 153 ~~~~~~~~v 161 (166) T 2vpv_A 153 NDEAKMFFV 161 (166) T ss_dssp SSCEEEEEE T ss_pred CCCEEEEEE T ss_conf 997999999 No 87 >2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A* Probab=97.89 E-value=2.5e-05 Score=49.03 Aligned_cols=65 Identities=20% Similarity=0.262 Sum_probs=27.4 Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCCCCC-EEE-EEEEEEEE--ECCC-----EECCCEEEECCCCCCEEEE Q ss_conf 7898720898489999968897447769886-799-99877898--2893-----2168617981899802248 Q T0582 135 STSLLHEDERETVTHRKLEPGANLTSEAAGG-IEV-LVLDGDVT--VNDE-----VLGRNAWLRLPEGEALSAT 199 (222) Q Consensus 135 ~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~G-eEi-~VLeG~l~--d~~~-----~~~~Gs~i~~P~g~~H~~~ 199 (222) +...|.+|+.-++..+.++||...+.|.|.. +++ +|++|.+. ++++ .+.+|+.++.|+|..|+.. T Consensus 7 ~~~v~~en~~vrV~~~~i~PG~~~~~H~H~~~~~~~~v~~G~~~~~~~~~~~~~~~~~aG~~~~ip~g~~H~~~ 80 (98) T 2ozi_A 7 KSEIQIDNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVR 80 (98) T ss_dssp EEEEEEESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEE T ss_pred EEEEEECCCCEEEEEEEECCCCCCCCEECCCCEEEEEEEEEEEEEEECCCCEEEEEEECCCEEEECCCCCEEEE T ss_conf 78899858968999999999999657899996799999642999997887248988707728998799929969 No 88 >3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural genomics, joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans} Probab=97.88 E-value=4.7e-05 Score=47.37 Aligned_cols=71 Identities=18% Similarity=0.231 Sum_probs=52.6 Q ss_pred CCEEEEEEECCCCC-CCCCC-CCCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCC-EEEE-ECCCCCEEEEEECCC Q ss_conf 84899999688974-47769-886799-998778982--893--216861798189980-2248-889882999983685 Q T0582 144 RETVTHRKLEPGAN-LTSEA-AGGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEA-LSAT-AGARGAKIWMKTGHL 214 (222) Q Consensus 144 ~e~v~L~r~~pG~~-~p~h~-h~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~-H~~~-a~~~Gc~i~vKTGHL 214 (222) .-.+.+++++||.. .+.|+ |..+|+ |||+|+... ++. .+.+||.++.|++.. |+.. .+.+.|.+++-+.+. T Consensus 45 ~~~v~~~~l~PG~~s~~~h~h~~~eE~~~Vl~G~~~~~~~~~~~~l~~GD~v~~p~~~~~H~~~N~g~e~l~~L~V~t~~ 124 (162) T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQRL 124 (162) T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEECC T ss_pred EEEEEEEEECCCCCCCCCEECCCCEEEEEEECCEEEEEECCEEEEECCCCEEEECCCCEEEEEECCCCCCEEEEEEECCC T ss_conf 48999999999989773616599729999992989999999999955995899889980888584998889999998999 No 89 >1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal binding protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A Probab=97.87 E-value=1.5e-05 Score=50.26 Aligned_cols=66 Identities=21% Similarity=0.193 Sum_probs=42.8 Q ss_pred EEEEEEEECCCCCCCCCCCCCC-EEEEEEEEEEE----CCC-----CCCCCCCEEECCCCCCCCEE--CCCCEEEEEE Q ss_conf 7999999568985788877764-69999877887----278-----61168616885889822326--4888089999 Q T0582 42 RATSIVRYAPGSRFSAHTHDGG-EEFIVLDGVFQ----DEH-----GDYPAGTYVRNPPTTSHVPG--SAEGCTIFVK 107 (222) Q Consensus 42 ~~t~lvr~~pG~~~p~H~H~~~-ee~~VL~G~~~----d~~-----~~~~~G~y~~~p~gs~H~p~--s~~Gc~~~vk 107 (222) -...+++++||+..+.|.|+.. |-+||++|... +.+ .++.+|+.++-|+|..|.-. +++.+.++.- T Consensus 257 ls~~~v~l~PG~~~~pH~Hp~a~E~~yv~~G~~~v~v~~~~g~~~t~~l~~GDv~vvP~g~~H~i~N~g~e~~~~l~~ 334 (385) T 1j58_A 257 IASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEI 334 (385) T ss_dssp CEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEE T ss_pred CEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEEECCCCEEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEE T ss_conf 326889865874148977989768999997969999990799379998448968998999759999759998899999 No 90 >3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.30A {Ruegeria pomeroyi dss-3} Probab=97.86 E-value=4.3e-05 Score=47.64 Aligned_cols=83 Identities=19% Similarity=0.232 Sum_probs=59.0 Q ss_pred CCCCCEEEEEEECCC---CCEEEEEEECCCCCC-CCCCC-CCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCC--E Q ss_conf 666862789872089---848999996889744-77698-86799-998778982--893--216861798189980--2 Q T0582 129 APVEGISTSLLHEDE---RETVTHRKLEPGANL-TSEAA-GGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEA--L 196 (222) Q Consensus 129 ~~~~Gv~~~~L~~~~---~e~v~L~r~~pG~~~-p~h~h-~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~--H 196 (222) ....|+....|-... .-.+.+++++||... +.|.| ..+|+ |||+|++.. ++. .+.+|+.++.|++.. | T Consensus 24 ~~~~gr~~~~lg~~~g~~~~~v~~v~l~PG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~~~~l~~Gd~~~ip~g~~~~H 103 (163) T 3i7d_A 24 AAMDGRSSLRLGDAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQGEHPMVPGDCAAFPAGDPNGH 103 (163) T ss_dssp GGGTTEEEEEHHHHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCCCB T ss_pred CCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEECCCCEEEEEEEECCEEEEECCEEEECCCCCEEEEECCCCCCE T ss_conf 44684499986046786637999999996988787538799759999997999999899999846995899959898467 Q ss_pred EEE-ECCCCCEEEEEE Q ss_conf 248-889882999983 Q T0582 197 SAT-AGARGAKIWMKT 211 (222) Q Consensus 197 ~~~-a~~~Gc~i~vKT 211 (222) +.. .+.+-|.+++-. T Consensus 104 ~~~N~gdep~~~L~V~ 119 (163) T 3i7d_A 104 QFVNRTDAPATFLVVG 119 (163) T ss_dssp EEECCSSSCEEEEEEE T ss_pred EEEECCCCCEEEEEEE T ss_conf 8895999989999998 No 91 >2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A* Probab=97.84 E-value=0.00059 Score=40.94 Aligned_cols=167 Identities=12% Similarity=0.089 Sum_probs=100.5 Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEEE----ECCC----------CCCCCCCEEECCCCCCCCEECCC-C-EEEEEEE Q ss_conf 99995689857888777646999987788----7278----------61168616885889822326488-8-0899990 Q T0582 45 SIVRYAPGSRFSAHTHDGGEEFIVLDGVF----QDEH----------GDYPAGTYVRNPPTTSHVPGSAE-G-CTIFVKL 108 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee~~VL~G~~----~d~~----------~~~~~G~y~~~p~gs~H~p~s~~-G-c~~~vkl 108 (222) .+++..|.+-+-+|..+....+||++|.= .+.+ .++..||-+..|+|+.|--+..+ + .+.++++ T Consensus 55 ~~~~~~P~~l~lP~~~nA~~l~yV~qG~G~~g~v~pg~~~s~~~~~~~~l~~GDv~~iPAG~~~~~~N~~d~e~L~vv~l 134 (397) T 2phl_A 55 VEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQL 134 (397) T ss_dssp EEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEE T ss_pred EEEEECCCEEECCCCCCCCEEEEEEECEEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEE T ss_conf 99997898276765379996999991889999997999634543100465558879988997699995799924999993 Q ss_pred EC------------------------CCCC---------------------CC-C--EEEECCCHH--------CCCCCC Q ss_conf 02------------------------7956---------------------65-6--078076135--------066668 Q T0582 109 WQ------------------------FDPA---------------------DR-T--QFSKNMEAE--------LGAPVE 132 (222) Q Consensus 109 ~q------------------------~~~~---------------------d~-~--~v~idt~~~--------~~~~~~ 132 (222) .. |+.+ .+ . -+..+-+.. ...... T Consensus 135 ~~~~n~~~~~~F~lag~~~~~sil~gFs~~vLa~Af~v~~e~~~rl~~~~~~~~~g~iv~~~~eqi~e~~~~~~~~~~~n 214 (397) T 2phl_A 135 AMPVNNPQIHEFFLSSTEAQQSYLQEFSKHILEASFNSKFEEINRVLFEEEGQQEGVIVNIDSEQIKELSKHAKSSSRKS 214 (397) T ss_dssp EEESSSSSCCEEECCCBTTBCCGGGGSCHHHHHHHHTSCHHHHHHHHTCSTTCBSSSEEECCTTTHHHHHHHHHTC---- T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC T ss_conf 35567887344210667686605541998999988499999999765043333666312134034433457777754356 Q ss_pred CEEEEEEE------------CCCCCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEEE----CCC------------EE Q ss_conf 62789872------------08984899999688974477698-86799-998778982----893------------21 Q T0582 133 GISTSLLH------------EDERETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV----NDE------------VL 182 (222) Q Consensus 133 Gv~~~~L~------------~~~~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d----~~~------------~~ 182 (222) ..+..+.+ .+-.-.+.++.+.+|+-...|.| ...|| ||++|+-.. ..+ .+ T Consensus 215 l~~~~p~~sn~~Gr~~~~~~~~l~i~~~~v~L~~gam~~PHwn~nA~~i~yV~~G~grvqvv~~~g~~~~~~~~~~~~~l 294 (397) T 2phl_A 215 LSKQDNTIGNEFGNLTERTDNSLNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAEL 294 (397) T ss_dssp -----CEEEETTEEEEEEEETTTTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEE T ss_pred CCCCCCCEECCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEEECCCCCCCCCCEEEEEEE T ss_conf 30138850158871886374458731135440257503674157872999996050689998179974331102211368 Q ss_pred CCCEEEECCCCCCEEEEECCCCCEEE-EEEC Q ss_conf 68617981899802248889882999-9836 Q T0582 183 GRNAWLRLPEGEALSATAGARGAKIW-MKTG 212 (222) Q Consensus 183 ~~Gs~i~~P~g~~H~~~a~~~Gc~i~-vKTG 212 (222) .+|+.+..|.+....-.|+.+ +.+. .||- T Consensus 295 ~~G~v~vVPq~~~v~~~A~~~-~~~v~F~tn 324 (397) T 2phl_A 295 SKDDVFVIPAAYPVAIKATSN-VNFTGFGIN 324 (397) T ss_dssp ETTCEEEECTTCCEEEEESSS-EEEEEEEES T ss_pred CCCCEEEECCCCCEEEEECCC-CEEEEEEEC T ss_conf 698689999999067880698-079999931 No 92 >1juh_A Quercetin 2,3-dioxygenase; copper, cupin, glycoprotein, beta sandwich, oxidoreductase; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A* Probab=97.82 E-value=0.00016 Score=44.23 Aligned_cols=66 Identities=11% Similarity=0.060 Sum_probs=43.6 Q ss_pred CCCEEEEEEECCCCCC--CCCCCC-CEEE-EEEEEEEEE----C-----CCEECCCEEEECCCCCCEEEEECCCCCEEE Q ss_conf 9848999996889744--776988-6799-998778982----8-----932168617981899802248889882999 Q T0582 143 ERETVTHRKLEPGANL--TSEAAG-GIEV-LVLDGDVTV----N-----DEVLGRNAWLRLPEGEALSATAGARGAKIW 208 (222) Q Consensus 143 ~~e~v~L~r~~pG~~~--p~h~h~-GeEi-~VLeG~l~d----~-----~~~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~ 208 (222) +.-.+....++||... +.|.|. ..|+ |||+|.+.. + .-.+.+||++..|+|..|......++|.++ T Consensus 46 g~~~~~~~~~~~g~~~g~~~H~H~~~~E~~~vl~G~~~~~~~~~~~~~~~~~l~~GD~~~~P~g~~H~~~n~~~~~~~l 124 (350) T 1juh_A 46 YAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMT 124 (350) T ss_dssp TSCEEEEEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTEEEE T ss_pred CEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCEEE T ss_conf 7189999961788888887616477638999997589999953789738999689988996999758858669982389 No 93 >2o8q_A Hypothetical protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans LB400} Probab=97.82 E-value=0.0001 Score=45.42 Aligned_cols=83 Identities=14% Similarity=0.007 Sum_probs=58.7 Q ss_pred CCCCCEEEEEEE----CCCCCEEEEEEECCCC--CCCCCCCCC-EEE-EEEEEEEEE--CCC---EECCCEEEECCCCCC Q ss_conf 666862789872----0898489999968897--447769886-799-998778982--893---216861798189980 Q T0582 129 APVEGISTSLLH----EDERETVTHRKLEPGA--NLTSEAAGG-IEV-LVLDGDVTV--NDE---VLGRNAWLRLPEGEA 195 (222) Q Consensus 129 ~~~~Gv~~~~L~----~~~~e~v~L~r~~pG~--~~p~h~h~G-eEi-~VLeG~l~d--~~~---~~~~Gs~i~~P~g~~ 195 (222) ..+.+.+...|- .++...+.++|..|+. ..+.|.|.. +|+ |||+|++.. ++. .+.+||.+..|+|.. T Consensus 21 g~R~~f~yRdlGi~~aT~G~~~~~vir~~~~~~~~~~~H~H~~~~e~~~Vl~G~~~~~~~g~~~~~l~~GD~i~iP~g~~ 100 (134) T 2o8q_A 21 GLREFFEYRDTGVNEATGGMFGAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYEDIGAVMLEAGGSAFQPPGVR 100 (134) T ss_dssp --CTTEEEEECSHHHHHTTSCEEEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETTTEEEEEETTCEEECCTTCC T ss_pred CCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCCCCEEEEEEEEEEEEEEECCCEEECCCCCEEEECCCCE T ss_conf 42174881105563156984899999988899998850788997299999962899999087679758999899689895 Q ss_pred EEEEECCCCCEEEEEE Q ss_conf 2248889882999983 Q T0582 196 LSATAGARGAKIWMKT 211 (222) Q Consensus 196 H~~~a~~~Gc~i~vKT 211 (222) |+.....+++.++-.. T Consensus 101 H~~~n~s~d~e~LeI~ 116 (134) T 2o8q_A 101 HRELRHSDDLEVLEIV 116 (134) T ss_dssp EEEEEECTTCEEEEEE T ss_pred EEEEECCCCEEEEEEE T ss_conf 9579789997999999 No 94 >2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PSI-2, protein structure initiative; 2.50A {Neisseria meningitidis} Probab=97.81 E-value=1.1e-05 Score=51.15 Aligned_cols=60 Identities=22% Similarity=0.404 Sum_probs=38.7 Q ss_pred EEEEECCCCCCCCCCCCCC-EEEEEEEEEEEC--CC---CCCCCCCEEECCCCCCCCEECCCCEEEEE Q ss_conf 9999568985788877764-699998778872--78---61168616885889822326488808999 Q T0582 45 SIVRYAPGSRFSAHTHDGG-EEFIVLDGVFQD--EH---GDYPAGTYVRNPPTTSHVPGSAEGCTIFV 106 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~-ee~~VL~G~~~d--~~---~~~~~G~y~~~p~gs~H~p~s~~Gc~~~v 106 (222) .++|+ +..+|.|.|+.. |-+|||+|.+.- ++ -.+.+|++++.|+|..|.+++.++|.+++ T Consensus 32 ~i~~~--~g~~~~H~H~~~dE~~~Vl~G~~~~~~~~~~~~~l~~Gd~i~ip~G~~Hr~~~~~d~~~l~ 97 (107) T 2i45_A 32 HLVKL--LGDYGWHTHGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVL 97 (107) T ss_dssp EEEEE--EEECCCBCC--CCEEEEESSSCEEEEETTSCEEEECTTEEEEECTTCCEEEEEEEEEEEEE T ss_pred EEEEE--CCCCCCEECCCCCEEEEEEEEEEEEEEECCEEEEECCCCEEEECCCCCCCCCCCCCCEEEE T ss_conf 99998--9943854996987799999619999992451798049968990898949157799977999 No 95 >2pyt_A Ethanolamine utilization protein EUTQ; 16421009, structural genomics, joint center for structural genomics, JCSG; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24 Probab=97.80 E-value=2.4e-05 Score=49.12 Aligned_cols=61 Identities=13% Similarity=0.242 Sum_probs=38.3 Q ss_pred CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEECCCCCEE Q ss_conf 8489999968897447769886799-998778982--893--216861798189980224888988299 Q T0582 144 RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATAGARGAKI 207 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a~~~Gc~i 207 (222) .....++.++||. ++ ++|.++|+ +||+|++.. ++. .+.+||.++.|+|..|+..+. +.|.+ T Consensus 56 ~~~~g~~~~~pg~-~~-~~~~~~E~~~vl~G~~~~~~~g~~~~l~~Gd~~~~p~g~~h~~~~~-~~~~~ 121 (133) T 2pyt_A 56 SMAAGFMQWDNAF-FP-WTLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTP-TSVRF 121 (133) T ss_dssp SSEEEEEEEEEEE-EE-EECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEEE-EEEEE T ss_pred CCEEEEEEECCCC-CC-EECCCEEEEEEEEEEEEEEECCEEEEECCCCEEEECCCCEEEEEEC-CCEEE T ss_conf 4287999986885-03-3089529999999999999899999962998999899997999969-98699 No 96 >2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A Probab=97.79 E-value=6e-05 Score=46.77 Aligned_cols=76 Identities=14% Similarity=0.173 Sum_probs=58.5 Q ss_pred EEEEEECCCCCEEEEEEECCCCCC--CCCCCC-CEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEE-CCCCC Q ss_conf 789872089848999996889744--776988-6799-998778982--893--21686179818998022488-89882 Q T0582 135 STSLLHEDERETVTHRKLEPGANL--TSEAAG-GIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATA-GARGA 205 (222) Q Consensus 135 ~~~~L~~~~~e~v~L~r~~pG~~~--p~h~h~-GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a-~~~Gc 205 (222) ....|+.....++..+.++||... +.|.|. .+|+ ||++|+... ++. .+.+||.++.|++..|+... +.+.+ T Consensus 11 ~~~vl~~~~~~~~~~~~v~PG~~~~~~~H~H~~~~E~~~vi~G~~~~~~~~~~~~l~~Gd~~~vp~~~~H~~~N~g~~~~ 90 (113) T 2gu9_A 11 AFKVLFSLRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQAHEIRNTGDTPL 90 (113) T ss_dssp SSBC-CEETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTEEEEECTTEEEEECTTCCEEEECCSSSCE T ss_pred EEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEECCCCEEEECCCCCEEEEEECCCCCE T ss_conf 06998448968999999969888888654889983999999898999989997861257168929999799699999999 Q ss_pred EEEEE Q ss_conf 99998 Q T0582 206 KIWMK 210 (222) Q Consensus 206 ~i~vK 210 (222) .++.- T Consensus 91 ~~l~v 95 (113) T 2gu9_A 91 KTVNF 95 (113) T ss_dssp EEEEE T ss_pred EEEEE T ss_conf 99999 No 97 >1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A Probab=97.74 E-value=7.4e-05 Score=46.23 Aligned_cols=65 Identities=22% Similarity=0.199 Sum_probs=33.3 Q ss_pred EEEEECCCCCCCCCCCCCC-EEEEEEEEEEECC-------C-----CCCCCCCEEECCCCCCCCEE--CCCCEEEEEEEE Q ss_conf 9999568985788877764-6999987788727-------8-----61168616885889822326--488808999900 Q T0582 45 SIVRYAPGSRFSAHTHDGG-EEFIVLDGVFQDE-------H-----GDYPAGTYVRNPPTTSHVPG--SAEGCTIFVKLW 109 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~-ee~~VL~G~~~d~-------~-----~~~~~G~y~~~p~gs~H~p~--s~~Gc~~~vkl~ 109 (222) ..+.++||+..|+|.|+.. |-+||++|...-+ . .++.+|+.++.|.|..|.-. +++.+.+++.+- T Consensus 75 arv~l~PGg~~~PH~Hp~A~Ei~yVl~G~~~vg~v~~~~~~~~~~~~~l~~GDv~v~P~G~~H~~~N~g~~~a~~i~~f~ 154 (201) T 1fi2_A 75 NRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFN 154 (201) T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEES T ss_pred EEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCEEEEEEEC T ss_conf 99998899783782089988899999373589998445679726887537985899889971899976999889999977 No 98 >2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} Probab=97.73 E-value=0.00012 Score=44.98 Aligned_cols=80 Identities=25% Similarity=0.307 Sum_probs=52.1 Q ss_pred CEEEEEEECCC--CCEEEEEEEEEECCCCCCCCCCCCCC-EEEEEEEEEEE----CCCC-----CCCCCCEEECCCCCCC Q ss_conf 55799950268--87057999999568985788877764-69999877887----2786-----1168616885889822 Q T0582 27 GVERRMLDRIG--GEVARATSIVRYAPGSRFSAHTHDGG-EEFIVLDGVFQ----DEHG-----DYPAGTYVRNPPTTSH 94 (222) Q Consensus 27 Gv~~~~L~~~~--~e~g~~t~lvr~~pG~~~p~H~H~~~-ee~~VL~G~~~----d~~~-----~~~~G~y~~~p~gs~H 94 (222) |-+.+.++... .-+.-...++.+.||+..+.|.|+.. |-+|||+|... +..+ ++.+|+.++-|+|..| T Consensus 217 gG~~~~~~~~~fp~l~~is~~~v~l~pG~~~~pH~H~~a~E~~yVl~G~~~~~v~~~~~~~~t~~l~~Gdv~~iP~g~~H 296 (361) T 2vqa_A 217 GNELRLASAKEFPGSFNMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGH 296 (361) T ss_dssp TEEEEEECTTTCTTSTTCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEE T ss_pred CEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCEEEEEEECCCCEEEECCCCEE T ss_conf 72799977321755346525999977884138869899889999992679999984376578999449978998999769 Q ss_pred CEE--CCCCEEEEE Q ss_conf 326--488808999 Q T0582 95 VPG--SAEGCTIFV 106 (222) Q Consensus 95 ~p~--s~~Gc~~~v 106 (222) ... +++.+.++. T Consensus 297 ~~~N~g~e~~~~l~ 310 (361) T 2vqa_A 297 AIRNSSQKPLDIVV 310 (361) T ss_dssp EEECCSSSCEEEEE T ss_pred EEEECCCCCEEEEE T ss_conf 99957999889999 No 99 >1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A Probab=97.72 E-value=6.9e-05 Score=46.41 Aligned_cols=67 Identities=16% Similarity=0.294 Sum_probs=52.6 Q ss_pred CCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEEEC--------C----CEECCCEEEECCCCCCEEEEE-CCCCCEEE Q ss_conf 84899999688974477698-86799-9987789828--------9----321686179818998022488-89882999 Q T0582 144 RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTVN--------D----EVLGRNAWLRLPEGEALSATA-GARGAKIW 208 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d~--------~----~~~~~Gs~i~~P~g~~H~~~a-~~~Gc~i~ 208 (222) +-.+..+.++||+..+.|.| ..+|+ |||+|++..+ . .++.+||.+..|.|..|.... +.+.+.++ T Consensus 71 GiS~arv~l~PGg~~~PH~Hp~A~Ei~yVl~G~~~vg~v~~~~~~~~~~~~~l~~GDv~v~P~G~~H~~~N~g~~~a~~i 150 (201) T 1fi2_A 71 GVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMV 150 (201) T ss_dssp SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEE T ss_pred CEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCEEEE T ss_conf 43379999889978378208998889999937358999844567972688753798589988997189997699988999 Q ss_pred EE Q ss_conf 98 Q T0582 209 MK 210 (222) Q Consensus 209 vK 210 (222) .. T Consensus 151 ~~ 152 (201) T 1fi2_A 151 VS 152 (201) T ss_dssp EE T ss_pred EE T ss_conf 99 No 100 >2fqp_A Hypothetical protein BP2299; NP_880937.1, structural genomics, joint center for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I} Probab=97.70 E-value=0.00013 Score=44.81 Aligned_cols=73 Identities=14% Similarity=0.165 Sum_probs=51.9 Q ss_pred CEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEE-EEEEEEEE--CCCC----CCCCCCEEECCCCCCCCEEC- Q ss_conf 5579995026887057999999568985788877764699-99877887--2786----11686168858898223264- Q T0582 27 GVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEF-IVLDGVFQ--DEHG----DYPAGTYVRNPPTTSHVPGS- 98 (222) Q Consensus 27 Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~-~VL~G~~~--d~~~----~~~~G~y~~~p~gs~H~p~s- 98 (222) ++....+ +++ .-+. ..++++||...+.|.|+..+++ ||++|.+. ++++ .+.+|++++.|+|..|.... T Consensus 7 ~~~tvl~--en~-~~~V-~~~~i~PG~~~~~H~H~~~~~~~~v~~G~~~v~~~~~~~~~~~~~G~~~~~p~g~~H~v~N~ 82 (97) T 2fqp_A 7 AIPTVQI--DNE-RVKV-TEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINP 82 (97) T ss_dssp CEEEEEE--ESS-SEEE-EEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEECC T ss_pred CCEEEEE--ECC-CEEE-EEEEECCCCCCCCEECCCCEEEEEEECCEEEEEECCCCEEECCCCCEEEEEECCCCEEEEEC T ss_conf 2479999--689-7899-99999899906731777886999998679999976871783056767999909982992989 Q ss_pred -CCCEE Q ss_conf -88808 Q T0582 99 -AEGCT 103 (222) Q Consensus 99 -~~Gc~ 103 (222) ++-+. T Consensus 83 gd~~l~ 88 (97) T 2fqp_A 83 SDTEFV 88 (97) T ss_dssp SSSCEE T ss_pred CCCCEE T ss_conf 898299 No 101 >2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A* Probab=97.68 E-value=5.8e-05 Score=46.86 Aligned_cols=74 Identities=19% Similarity=0.188 Sum_probs=52.0 Q ss_pred EEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEE-EEEEEEEE--CCCC-----CCCCCCEEECCCCCCCCEE--C Q ss_conf 79995026887057999999568985788877764699-99877887--2786-----1168616885889822326--4 Q T0582 29 ERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEF-IVLDGVFQ--DEHG-----DYPAGTYVRNPPTTSHVPG--S 98 (222) Q Consensus 29 ~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~-~VL~G~~~--d~~~-----~~~~G~y~~~p~gs~H~p~--s 98 (222) ..++|- +++ .-+. ..+.++||...+.|.|+..+++ ||++|.+. ++++ .+.+|+.++.|+|..|... + T Consensus 7 ~~~v~~-en~-~vrV-~~~~i~PG~~~~~H~H~~~~~~~~v~~G~~~~~~~~~~~~~~~~~aG~~~~ip~g~~H~~~N~G 83 (98) T 2ozi_A 7 KSEIQI-DND-EVRV-TEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNES 83 (98) T ss_dssp EEEEEE-ESS-SEEE-EEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECS T ss_pred EEEEEE-CCC-CEEE-EEEEECCCCCCCCEECCCCEEEEEEEEEEEEEEECCCCEEEEEEECCCEEEECCCCCEEEEECC T ss_conf 788998-589-6899-9999999999657899996799999642999997887248988707728998799929969899 Q ss_pred CCCEEEE Q ss_conf 8880899 Q T0582 99 AEGCTIF 105 (222) Q Consensus 99 ~~Gc~~~ 105 (222) ++-+.++ T Consensus 84 d~~~~~I 90 (98) T 2ozi_A 84 TAEIVFL 90 (98) T ss_dssp SSCEEEE T ss_pred CCEEEEE T ss_conf 9709999 No 102 >2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal-kingston bacterial structural genomics initiative; 2.41A {Escherichia coli O157} SCOP: b.82.1.23 Probab=97.65 E-value=0.00022 Score=43.43 Aligned_cols=67 Identities=13% Similarity=0.233 Sum_probs=52.4 Q ss_pred CCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEE--EE-CCC--EECCCEEEECCCCCCEEEEECCCCCEEEE Q ss_conf 98489999968897447769886799-9987789--82-893--21686179818998022488898829999 Q T0582 143 ERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDV--TV-NDE--VLGRNAWLRLPEGEALSATAGARGAKIWM 209 (222) Q Consensus 143 ~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l--~d-~~~--~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~v 209 (222) ......++.++||...+.|.|..+|+ |||+|+. .. +++ .+.+||++..|++..|......++..+|+ T Consensus 98 ~tl~a~~~~l~PGe~~~~H~H~~~~~~~vl~G~g~~t~v~~~~~~~~~GD~~~~P~~~~H~~~n~~d~~~~~l 170 (354) T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWL 170 (354) T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEE T ss_pred CHHHHHEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEECCEEEEEECCCEEECCCCCEEEEEECCCCCEEEE T ss_conf 1043210897899857704476613689998944899888978885089989818997488682799878999 No 103 >2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A Probab=97.64 E-value=0.0019 Score=37.92 Aligned_cols=69 Identities=20% Similarity=0.198 Sum_probs=53.9 Q ss_pred CCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEEE----CCC------EECCCEEEECCCCCCEEEEECCCCCEEE-EE Q ss_conf 84899999688974477698-86799-998778982----893------2168617981899802248889882999-98 Q T0582 144 RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV----NDE------VLGRNAWLRLPEGEALSATAGARGAKIW-MK 210 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d----~~~------~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~-vK 210 (222) +-.+.++.+.||+-.+.|.| ...|+ ||++|+... ..+ .+.+|+.+..|.+..|.-.++.+|+..+ ++ T Consensus 321 ~ls~~~v~L~~gam~~PHwn~nA~ei~yV~~G~g~vqvV~~~g~~~~~~~l~~Gdv~VvPqg~~~~~~a~~e~~e~v~f~ 400 (459) T 2e9q_A 321 RLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASDRGFEWIAFK 400 (459) T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE T ss_pred CCEEEEEEECCCCEECCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCEEEEECCCCEEEEEECCCCEEEEEEE T ss_conf 32058974558965067217888889999846589999928997898308748719999999879998279985999997 Q ss_pred EC Q ss_conf 36 Q T0582 211 TG 212 (222) Q Consensus 211 TG 212 (222) |- T Consensus 401 tn 402 (459) T 2e9q_A 401 TN 402 (459) T ss_dssp SS T ss_pred CC T ss_conf 58 No 104 >1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15 Probab=97.64 E-value=0.0004 Score=41.94 Aligned_cols=71 Identities=18% Similarity=0.145 Sum_probs=50.1 Q ss_pred ECCCCCEEEEEEECCCCCC--CCCCCCCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCEEEEECCCC-CEEEEE Q ss_conf 2089848999996889744--7769886799-998778982--893--216861798189980224888988-299998 Q T0582 140 HEDERETVTHRKLEPGANL--TSEAAGGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEALSATAGARG-AKIWMK 210 (222) Q Consensus 140 ~~~~~e~v~L~r~~pG~~~--p~h~h~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H~~~a~~~G-c~i~vK 210 (222) ..+.+..++++.++||... ..|.|.++|+ +||+|++.. ++. .+.+||.++.+++..|......+. |.+++- T Consensus 99 ~~~~~~e~~~i~l~pg~~~~~~~~~~~~~E~~~Vl~G~l~v~~g~~~~~L~~GDs~~f~~~~pH~~~n~~~~~~~~lvV 177 (192) T 1y9q_A 99 AADTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQNIV 177 (192) T ss_dssp ETTTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETTEEEEECTTCEEEEECSSSEEEEESSSCEEEEEEE T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCCCEEEEEE T ss_conf 4322201000378531356652100363679999999999999999999789978998799988869689788999999 No 105 >2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloenzyme, trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A Probab=97.60 E-value=0.00024 Score=43.21 Aligned_cols=78 Identities=19% Similarity=0.222 Sum_probs=54.1 Q ss_pred CCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE----ECCC----EECCCEEEECCCCCCEEEEE Q ss_conf 668627898720898489999968897447769886799-99877898----2893----21686179818998022488 Q T0582 130 PVEGISTSLLHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT----VNDE----VLGRNAWLRLPEGEALSATA 200 (222) Q Consensus 130 ~~~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~----d~~~----~~~~Gs~i~~P~g~~H~~~a 200 (222) ..|.|-.+.||.+ ...|..+ --|+++-..|.|.++|+ |||+|++. ++++ .+.+||.+..|++..|++.. T Consensus 18 l~ppv~n~~~~~~-~~~~m~v-ggpn~r~d~H~h~~~E~fyvl~G~~~l~v~~~G~~~~v~i~~GDi~~~P~~vpHs~q~ 95 (286) T 2qnk_A 18 FQPPVCNKLMHQE-QLKVMFI-GGPNTRKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQR 95 (286) T ss_dssp SSTTTCEEEEEES-SEEEEEE-CSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCEEEEE T ss_pred CCCCCCCEEEECC-CEEEEEE-CCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCEEEEEECCCCEEEECCCCCCCCEE T ss_conf 1899573577518-8089996-7998777575388251899992679999983897489885798889967999847667 Q ss_pred CCCCCEEEE Q ss_conf 898829999 Q T0582 201 GARGAKIWM 209 (222) Q Consensus 201 ~~~Gc~i~v 209 (222) ..+++.+.+ T Consensus 96 ~~d~~glv~ 104 (286) T 2qnk_A 96 FANTVGLVV 104 (286) T ss_dssp CTTCEEEEE T ss_pred CCCCEEEEE T ss_conf 489439999 No 106 >2pyt_A Ethanolamine utilization protein EUTQ; 16421009, structural genomics, joint center for structural genomics, JCSG; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24 Probab=97.57 E-value=0.00011 Score=45.33 Aligned_cols=95 Identities=19% Similarity=0.130 Sum_probs=60.3 Q ss_pred EEECCCCCCEEC---CCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--CCC--CCCCCC Q ss_conf 770564663315---8895579995026887057999999568985788877764699998778872--786--116861 Q T0582 12 VIDTDQLEWRPS---PMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EHG--DYPAGT 84 (222) Q Consensus 12 ~v~~~~~~W~~~---p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~~~--~~~~G~ 84 (222) +++...++.... ...++....+............++++.||. ++ +.|++.|.+|||+|.+.. ++. .+.+|+ T Consensus 24 iv~~~~v~~~~~~~~e~~~~~~~~~~~~~~~~~~~~g~~~~~pg~-~~-~~~~~~E~~~vl~G~~~~~~~g~~~~l~~Gd 101 (133) T 2pyt_A 24 VIDGSSVKFGRFDGAEPHCVGLTDLVTEQDGSSMAAGFMQWDNAF-FP-WTLNYDEIDMVLEGELHVRHEGETMIAKAGD 101 (133) T ss_dssp EECGGGCBCEECGGGTTSCCEEEEEECGGGTCSSEEEEEEEEEEE-EE-EECSSEEEEEEEEEEEEEEETTEEEEEETTC T ss_pred EEECCCCCHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCC-CC-EECCCEEEEEEEEEEEEEEECCEEEEECCCC T ss_conf 984365253332478986079999761589984287999986885-03-3089529999999999999899999962998 Q ss_pred EEECCCCCCCCEECCCCEEEEEEE Q ss_conf 688588982232648880899990 Q T0582 85 YVRNPPTTSHVPGSAEGCTIFVKL 108 (222) Q Consensus 85 y~~~p~gs~H~p~s~~Gc~~~vkl 108 (222) .++.|+|..|.-.++++|.++.-. T Consensus 102 ~~~~p~g~~h~~~~~~~~~~~~v~ 125 (133) T 2pyt_A 102 VMFIPKGSSIEFGTPTSVRFLYVA 125 (133) T ss_dssp EEEECTTCEEEEEEEEEEEEEEEE T ss_pred EEEECCCCEEEEEECCCEEEEEEE T ss_conf 999899997999969986999998 No 107 >2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PSI-2, protein structure initiative; 2.50A {Neisseria meningitidis} Probab=97.56 E-value=7.9e-05 Score=46.08 Aligned_cols=68 Identities=15% Similarity=0.234 Sum_probs=49.2 Q ss_pred EEECCCCCEEEEEEECCCCCCCCCCCCC-EEE-EEEEEEEEE--CC---CEECCCEEEECCCCCCEEEEECCCCCEEEE Q ss_conf 8720898489999968897447769886-799-998778982--89---321686179818998022488898829999 Q T0582 138 LLHEDERETVTHRKLEPGANLTSEAAGG-IEV-LVLDGDVTV--ND---EVLGRNAWLRLPEGEALSATAGARGAKIWM 209 (222) Q Consensus 138 ~L~~~~~e~v~L~r~~pG~~~p~h~h~G-eEi-~VLeG~l~d--~~---~~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~v 209 (222) .+.. .+..+.++++ +..++.|.|.. .|+ |||+|++.. ++ -.+.+|+.+..|+|..|++++ .++|.+.+ T Consensus 23 v~~~-n~~~~~i~~~--~g~~~~H~H~~~dE~~~Vl~G~~~~~~~~~~~~~l~~Gd~i~ip~G~~Hr~~~-~~d~~~l~ 97 (107) T 2i45_A 23 IINR-HGFQFHLVKL--LGDYGWHTHGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRS-ENGCSLVL 97 (107) T ss_dssp EEEE-TTEEEEEEEE--EEECCCBCC--CCEEEEESSSCEEEEETTSCEEEECTTEEEEECTTCCEEEEE-EEEEEEEE T ss_pred EECC-CCCEEEEEEE--CCCCCCEECCCCCEEEEEEEEEEEEEEECCEEEEECCCCEEEECCCCCCCCCC-CCCCEEEE T ss_conf 7973-6989999998--99438549969877999996199999924517980499689908989491577-99977999 No 108 >3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis} Probab=97.47 E-value=0.00059 Score=40.97 Aligned_cols=68 Identities=15% Similarity=0.161 Sum_probs=32.5 Q ss_pred CEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCC-EEEEEEEEEEECC-------------CCCCCCCCEEECCCCC Q ss_conf 5579995026887057999999568985788877764-6999987788727-------------8611686168858898 Q T0582 27 GVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGG-EEFIVLDGVFQDE-------------HGDYPAGTYVRNPPTT 92 (222) Q Consensus 27 Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~-ee~~VL~G~~~d~-------------~~~~~~G~y~~~p~gs 92 (222) ...|.+|+.++ .- ...++.+.||...|.|.|++. +-+.||+|.+... .-...+|+.+..|+|. T Consensus 57 ~Y~R~lI~~~~--~f-~i~~i~w~PG~~tpiHdH~~~~~~~~Vl~G~~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~~~~ 133 (171) T 3eqe_A 57 AYGRNAIYRNN--EL-EIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGL 133 (171) T ss_dssp SSEEEEEEECS--SC-EEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTC T ss_pred CCEEEEEEECC--CE-EEEEEEECCCCCCCCEECCCCCEEEEEECCEEEEEEEEECCCCCCCCCEEECCCCCEEECCCCC T ss_conf 71768998489--98-9999998999966762189981899982365899986513666555513541588278628998 Q ss_pred CCCEE Q ss_conf 22326 Q T0582 93 SHVPG 97 (222) Q Consensus 93 ~H~p~ 97 (222) .|.-. T Consensus 134 iH~i~ 138 (171) T 3eqe_A 134 IHKMS 138 (171) T ss_dssp EEEEE T ss_pred EEEEE T ss_conf 68888 No 109 >1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A* Probab=97.47 E-value=0.00081 Score=40.16 Aligned_cols=88 Identities=23% Similarity=0.151 Sum_probs=64.8 Q ss_pred CCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE---CCCC-----CCCCCCEEECCCCCCCC Q ss_conf 889557999502688705799999956898578887776469999877887---2786-----11686168858898223 Q T0582 24 PMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ---DEHG-----DYPAGTYVRNPPTTSHV 95 (222) Q Consensus 24 p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~---d~~~-----~~~~G~y~~~p~gs~H~ 95 (222) ..|=|--|.|+.+.+ ++..+==.|+++-..|.|+..|.+|+|+|... .++| +..+|+.++.|++..|+ T Consensus 21 l~PPV~Nk~~~~~~~----~ivm~VGGPN~R~d~H~h~~eEwfYqlkG~~~l~v~~dg~~~~i~I~eGDi~llP~~vpHS 96 (174) T 1yfu_A 21 LKPPVGNRQVWQDSD----FIVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHS 96 (174) T ss_dssp SSTTTCEEESSSSCS----EEEEEECSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEE T ss_pred HCCCCCCCEEECCCC----EEEEEECCCCCCCCCEECCCHHEEEEECCEEEEEEECCCCEEEEECCCCCEEEECCCCCCC T ss_conf 189978731552898----7999951688667430177003237862459999970897388633898689718999878 Q ss_pred EEC-CCCEEEEEEEECCCCCC Q ss_conf 264-88808999900279566 Q T0582 96 PGS-AEGCTIFVKLWQFDPAD 115 (222) Q Consensus 96 p~s-~~Gc~~~vkl~q~~~~d 115 (222) |.. +.|..-||--+.=++++ T Consensus 97 PqR~~~~tiGlViEr~R~~~~ 117 (174) T 1yfu_A 97 PQRPEAGSACLVIERQRPAGM 117 (174) T ss_dssp EEBCCTTCEEEEEEECCCTTC T ss_pred CCCCCCCCCEEEEEEECCCCC T ss_conf 665668852089997549998 No 110 >3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824} Probab=97.45 E-value=0.00029 Score=42.78 Aligned_cols=63 Identities=14% Similarity=0.141 Sum_probs=34.1 Q ss_pred EEEEECCC----CCCCCCCCCCC-EEEEEEEEEEEC------CC------CCCCCCCEEECCCCCCCCEECCCCEEEEEE Q ss_conf 99995689----85788877764-699998778872------78------611686168858898223264888089999 Q T0582 45 SIVRYAPG----SRFSAHTHDGG-EEFIVLDGVFQD------EH------GDYPAGTYVRNPPTTSHVPGSAEGCTIFVK 107 (222) Q Consensus 45 ~lvr~~pG----~~~p~H~H~~~-ee~~VL~G~~~d------~~------~~~~~G~y~~~p~gs~H~p~s~~Gc~~~vk 107 (222) ++++|.|+ ...+.|+|+.+ |-++||+|.+.- +. -...+|+.+..|.|..|.|.+..+|.+++- T Consensus 28 ~~~~~~p~~~~~gi~~~e~Hp~~dE~Fivl~G~~~l~~~~~~~~~~~~~~v~l~~Ge~~~vP~gv~H~~~a~~~t~~l~I 107 (140) T 3d0j_A 28 CIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKMMYV 107 (140) T ss_dssp EEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEEEEE T ss_pred EEEECCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCEEEECCCCEECCCCCCCCEEEEE T ss_conf 99832566577888664288998648999649669999725667773345980798689928996183678899789999 No 111 >2phd_A Gentisate 1,2-dioxygenase; beta-sandwich, oxidoreductase; 2.90A {Pseudaminobacter salicylatoxidans} SCOP: b.82.1.23 Probab=97.41 E-value=0.00033 Score=42.42 Aligned_cols=64 Identities=17% Similarity=0.189 Sum_probs=33.5 Q ss_pred CEEEEEEECCCCCCCCCCCCCEEE-EEEEEEE--E-ECCC--EECCCEEEECCCCCCEEEEECCCCCEEE Q ss_conf 489999968897447769886799-9987789--8-2893--2168617981899802248889882999 Q T0582 145 ETVTHRKLEPGANLTSEAAGGIEV-LVLDGDV--T-VNDE--VLGRNAWLRLPEGEALSATAGARGAKIW 208 (222) Q Consensus 145 e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l--~-d~~~--~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~ 208 (222) -...++.+.||...+.|.|...++ |||+|+- + .+.+ .+.+||.+..|.+.-|......+...+| T Consensus 103 l~a~~q~~~PGe~~~~HrH~~~a~~~vieG~G~~t~v~g~~~~~~~GD~~~~P~~~~H~h~n~gd~~~~~ 172 (368) T 2phd_A 103 MWAGIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNGDPVRMSRGDLLLTPGWCFHGHMNDTDQPMAW 172 (368) T ss_dssp CEEEEEEECTTCEEEEEEESSCEEEEEEECEEEEEEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEE T ss_pred HHHHEEEECCCCCCCCCCCCHHHEEEEEECCCEEEEECCEEEEEECCCEEEECCCCEEEEEECCCCCEEE T ss_conf 5502499789983785658642249999898578978999988658999970899617605079988899 No 112 >2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae} Probab=97.36 E-value=0.00043 Score=41.77 Aligned_cols=80 Identities=13% Similarity=0.082 Sum_probs=56.1 Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECCCCCC--CCCCCCCCEEEEEEEEEEEC--CC--CCCCCCCEEECCCCCCCCEE-- Q ss_conf 955799950268870579999995689857--88877764699998778872--78--61168616885889822326-- Q T0582 26 KGVERRMLDRIGGEVARATSIVRYAPGSRF--SAHTHDGGEEFIVLDGVFQD--EH--GDYPAGTYVRNPPTTSHVPG-- 97 (222) Q Consensus 26 ~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~--p~H~H~~~ee~~VL~G~~~d--~~--~~~~~G~y~~~p~gs~H~p~-- 97 (222) .+..+..+...... .....++.++||+.. +.|.|.+.|-+|||+|.+.- ++ -.+.+|+.++.|+|..|.-. T Consensus 73 ~~~~~~~~~~~~~~-~~~~~~l~l~pg~~~~~~~h~h~~~e~~~Vl~G~~~v~~~~~~~~l~~Gd~~~~~~~~~h~~~N~ 151 (166) T 2vpv_A 73 ENFALEIMFDKHKE-YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKNKFLSVKGSTFQIPAFNEYAIANR 151 (166) T ss_dssp CBCCCCEECCTTTC-SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCEEEEEEC T ss_pred CCEEEEEECCCCCC-CEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEECCCCEEEECCCCEEEEEEC T ss_conf 82799774178888-33779999999994587653577679999997299999896899979998999889894998979 Q ss_pred CCCCEEEEE Q ss_conf 488808999 Q T0582 98 SAEGCTIFV 106 (222) Q Consensus 98 s~~Gc~~~v 106 (222) +++-|.+|+ T Consensus 152 ~~~~~~~~~ 160 (166) T 2vpv_A 152 GNDEAKMFF 160 (166) T ss_dssp SSSCEEEEE T ss_pred CCCCEEEEE T ss_conf 999799999 No 113 >2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A Probab=97.31 E-value=0.0014 Score=38.68 Aligned_cols=79 Identities=19% Similarity=0.159 Sum_probs=52.5 Q ss_pred CEEEEEEECC---CCCEEEEEEECCCCCCCC---CCCCCEEE-EEEEEEEEE--CC----C--EECCCEEEECCCCCCEE Q ss_conf 6278987208---984899999688974477---69886799-998778982--89----3--21686179818998022 Q T0582 133 GISTSLLHED---ERETVTHRKLEPGANLTS---EAAGGIEV-LVLDGDVTV--ND----E--VLGRNAWLRLPEGEALS 197 (222) Q Consensus 133 Gv~~~~L~~~---~~e~v~L~r~~pG~~~p~---h~h~GeEi-~VLeG~l~d--~~----~--~~~~Gs~i~~P~g~~H~ 197 (222) +.....|-.. .....+++.++|+..-.. ..|.|+|+ |||+|.+.. ++ . .+.+||-++.+....|. T Consensus 102 ~~~~~~L~~~~~~~~~e~~~~~~~~~~~~~~~~~~~H~g~E~~~Vl~G~l~v~~g~~~~~~~~~L~~GDS~~f~~~~pH~ 181 (198) T 2bnm_A 102 YYVYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPHA 181 (198) T ss_dssp TEEEEECCCCTTSTTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCEE T ss_pred EEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCCEEEEECCCCEEEECCCCCEE T ss_conf 48999656887898238999998589987765457878679999993212999533256348998999889988999989 Q ss_pred EEE--CCCCCEEEEEE Q ss_conf 488--89882999983 Q T0582 198 ATA--GARGAKIWMKT 211 (222) Q Consensus 198 ~~a--~~~Gc~i~vKT 211 (222) ..+ +.+-|.+++-| T Consensus 182 ~~n~~g~~~a~~l~V~ 197 (198) T 2bnm_A 182 FTAAKGTGSAKLIAVN 197 (198) T ss_dssp EEESTTSCCEEEEEEE T ss_pred EECCCCCCEEEEEEEE T ss_conf 8838999519999998 No 114 >3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23 Probab=97.29 E-value=0.0009 Score=39.87 Aligned_cols=81 Identities=22% Similarity=0.248 Sum_probs=58.5 Q ss_pred CCCCCEEEEEEECCCCCEEE------EEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE--CCC--CCCCCCCEEECCCCC Q ss_conf 58895579995026887057------99999956898578887776469999877887--278--611686168858898 Q T0582 23 SPMKGVERRMLDRIGGEVAR------ATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--DEH--GDYPAGTYVRNPPTT 92 (222) Q Consensus 23 ~p~~Gv~~~~L~~~~~e~g~------~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~--d~~--~~~~~G~y~~~p~gs 92 (222) .|..|+..+.. +.++|. .+.+.++.||.....|+|....-++|++|.=. .++ -++.+||.++-|+.+ T Consensus 272 ~p~~g~~l~Y~---NP~TGg~~~pTi~~~~q~L~pG~~t~~hRht~saV~~VieG~G~s~Igg~~~~W~~GD~FvVPsW~ 348 (394) T 3bu7_A 272 SPYDGLILRYT---NPQTGGHPMLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWT 348 (394) T ss_dssp BTTTBEEEEEC---CTTTSSCSSSSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETTEEEEECTTCEEEECTTC T ss_pred CCCCCEEEEEC---CCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEEECCCCEEEECCCC T ss_conf 86783599962---778888876537550478589987788566563899999681799989999996289989979998 Q ss_pred CCCEE--C-CCCEEEEE Q ss_conf 22326--4-88808999 Q T0582 93 SHVPG--S-AEGCTIFV 106 (222) Q Consensus 93 ~H~p~--s-~~Gc~~~v 106 (222) .|+-. | .+.|.+|. T Consensus 349 ~h~H~N~sa~e~a~Lf~ 365 (394) T 3bu7_A 349 WHEHCNTQERDDACLFS 365 (394) T ss_dssp CEEEEECCSSCCEEEEE T ss_pred CEEECCCCCCCCEEEEE T ss_conf 44622468889779999 No 115 >1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15 Probab=97.25 E-value=0.0018 Score=38.12 Aligned_cols=75 Identities=13% Similarity=0.098 Sum_probs=51.4 Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECCCCCC--CCCCCCCCEEEEEEEEEEEC--CCC--CCCCCCEEECCCCCCCCEECC Q ss_conf 955799950268870579999995689857--88877764699998778872--786--116861688588982232648 Q T0582 26 KGVERRMLDRIGGEVARATSIVRYAPGSRF--SAHTHDGGEEFIVLDGVFQD--EHG--DYPAGTYVRNPPTTSHVPGSA 99 (222) Q Consensus 26 ~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~--p~H~H~~~ee~~VL~G~~~d--~~~--~~~~G~y~~~p~gs~H~p~s~ 99 (222) .+.....|.......+....++.+.||+.. ..|.|.+.|-+|||+|.+.. ++. ...+|+.++.+++..|..... T Consensus 88 ~~~~~~~L~~~~~~~~~e~~~i~l~pg~~~~~~~~~~~~~E~~~Vl~G~l~v~~g~~~~~L~~GDs~~f~~~~pH~~~n~ 167 (192) T 1y9q_A 88 LNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAV 167 (192) T ss_dssp TTEEEEEEEEEETTTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETTEEEEECTTCEEEEECSSSEEEEES T ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEECCCCEEEECCCCCEEEEEC T ss_conf 32111011687432220100037853135665210036367999999999999999999978997899879998886968 Q ss_pred C Q ss_conf 8 Q T0582 100 E 100 (222) Q Consensus 100 ~ 100 (222) . T Consensus 168 ~ 168 (192) T 1y9q_A 168 T 168 (192) T ss_dssp S T ss_pred C T ss_conf 9 No 116 >2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant protein; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A Probab=97.18 E-value=0.0093 Score=33.94 Aligned_cols=70 Identities=20% Similarity=0.196 Sum_probs=53.6 Q ss_pred CCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEEE----CCC------EECCCEEEECCCCCCEEEEECCCCCEEE-EE Q ss_conf 84899999688974477698-86799-998778982----893------2168617981899802248889882999-98 Q T0582 144 RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV----NDE------VLGRNAWLRLPEGEALSATAGARGAKIW-MK 210 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~d----~~~------~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~-vK 210 (222) +-.+.++.+.||+-.+.|.| ...|| ||++|+... ..+ .+.+|+.+..|.|..|--.++.+++.++ +| T Consensus 366 ~lsa~~v~L~~gam~~PHwhp~A~ei~yV~~G~~~vqvV~~~g~~~~~~~l~~Gdv~VvPqg~~~~~~a~~e~~~~v~f~ 445 (493) T 2d5f_A 366 GLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFK 445 (493) T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE T ss_pred CCEEEEEEECCCCCCCEEECCCCCEEEEEEEEEEEEEEEECCCCEEEEEEECCCCEEEECCCCEEEEECCCCCEEEEEEE T ss_conf 75035654134752111666888889999940589999928997765318738868999999889998189967999997 Q ss_pred ECC Q ss_conf 368 Q T0582 211 TGH 213 (222) Q Consensus 211 TGH 213 (222) |-. T Consensus 446 tn~ 448 (493) T 2d5f_A 446 THH 448 (493) T ss_dssp SST T ss_pred CCC T ss_conf 889 No 117 >2opk_A Hypothetical protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.10A {Ralstonia eutropha JMP134} Probab=97.14 E-value=0.0062 Score=34.99 Aligned_cols=73 Identities=15% Similarity=0.244 Sum_probs=40.4 Q ss_pred EEEECCCCCEEEEEEECCCCCCCC--CCCCCEEE-EEEEEEE--EECC--C--EECCCEEEECCCCCCEEEE-ECCCCCE Q ss_conf 987208984899999688974477--69886799-9987789--8289--3--2168617981899802248-8898829 Q T0582 137 SLLHEDERETVTHRKLEPGANLTS--EAAGGIEV-LVLDGDV--TVND--E--VLGRNAWLRLPEGEALSAT-AGARGAK 206 (222) Q Consensus 137 ~~L~~~~~e~v~L~r~~pG~~~p~--h~h~GeEi-~VLeG~l--~d~~--~--~~~~Gs~i~~P~g~~H~~~-a~~~Gc~ 206 (222) -.|.+.++-++--+--.++.+.+. |++..+|. +||+|+. ..++ . .+.+||+++.|++..|+.. ++++.++ T Consensus 23 e~L~~~~~~kieRIvs~~~~s~~~~w~~q~~eEWviVl~G~a~v~~~~~~~~~~L~~Gd~i~IP~~~~HRv~nTs~~~~t 102 (112) T 2opk_A 23 QPLLERKGLKIERIISNGQASPPGFWYDSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPT 102 (112) T ss_dssp EEEEEETTEEEEEEEESSCCCCTTCCBCCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEEECSSSCE T ss_pred EEEECCCCEEEEEEEECCCCCCCCCCEECCCCEEEEEEECEEEEEECCCCEEEEECCCCEEEECCCCCEEEEECCCCCCE T ss_conf 99862999999999999988898625817984799998478999987786799946999999879894986767999988 Q ss_pred EEE Q ss_conf 999 Q T0582 207 IWM 209 (222) Q Consensus 207 i~v 209 (222) +|+ T Consensus 103 iWL 105 (112) T 2opk_A 103 VWL 105 (112) T ss_dssp EEE T ss_pred EEE T ss_conf 999 No 118 >3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824} Probab=97.08 E-value=0.00057 Score=41.02 Aligned_cols=78 Identities=12% Similarity=0.110 Sum_probs=59.5 Q ss_pred CCEEEEEEECCCCCEEEEEEECCCC----CCCCCCC-CCEEE-EEEEEEEEE------C------CCEECCCEEEECCCC Q ss_conf 8627898720898489999968897----4477698-86799-998778982------8------932168617981899 Q T0582 132 EGISTSLLHEDERETVTHRKLEPGA----NLTSEAA-GGIEV-LVLDGDVTV------N------DEVLGRNAWLRLPEG 193 (222) Q Consensus 132 ~Gv~~~~L~~~~~e~v~L~r~~pG~----~~p~h~h-~GeEi-~VLeG~l~d------~------~~~~~~Gs~i~~P~g 193 (222) .|-...+|+++++-+|..+++.|+. ..+.|.| .+.|+ +||+|++.. + .-...+|+.+..|.| T Consensus 12 ~~~g~~~~~~~~~w~V~~~~~~p~~~~~gi~~~e~Hp~~dE~Fivl~G~~~l~~~~~~~~~~~~~~v~l~~Ge~~~vP~g 91 (140) T 3d0j_A 12 NREGILCVYKNEKWLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAE 91 (140) T ss_dssp CSSSEEEEEECSSEEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTT T ss_pred CCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCEEEECCC T ss_conf 89740022336867899983256657788866428899864899964966999972566777334598079868992899 Q ss_pred CCEEEEECCCCCEEEEE Q ss_conf 80224888988299998 Q T0582 194 EALSATAGARGAKIWMK 210 (222) Q Consensus 194 ~~H~~~a~~~Gc~i~vK 210 (222) ..|.+.+. .+|.+++- T Consensus 92 v~H~~~a~-~~t~~l~I 107 (140) T 3d0j_A 92 CWFYSITQ-KDTKMMYV 107 (140) T ss_dssp CEEEEEEC-TTCEEEEE T ss_pred CEECCCCC-CCCEEEEE T ss_conf 61836788-99789999 No 119 >1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices, merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A Probab=97.03 E-value=0.0014 Score=38.71 Aligned_cols=66 Identities=14% Similarity=0.075 Sum_probs=44.5 Q ss_pred EEEEEECCCCCCCCCCCCCCEEEEEEEEEEE----CCC----CCCCCCCEEECCCCCCCCEEC--CCCEEEEEEEE Q ss_conf 9999956898578887776469999877887----278----611686168858898223264--88808999900 Q T0582 44 TSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ----DEH----GDYPAGTYVRNPPTTSHVPGS--AEGCTIFVKLW 109 (222) Q Consensus 44 t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~----d~~----~~~~~G~y~~~p~gs~H~p~s--~~Gc~~~vkl~ 109 (222) -.++++.||+-+.+|.....|-+||++|.-. +.+ -+..+|+.+..|+|..|.... ++-.+.++.+- T Consensus 43 v~~~~i~p~~l~~Ph~~~a~ev~yV~~G~g~v~~v~~~~~~~~~l~~Gdv~~iP~G~~h~~~N~~~~~~l~~~~~~ 118 (178) T 1dgw_A 43 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFA 118 (178) T ss_dssp EEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEE T ss_pred EEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEECCCCEEEECCCCEEEEEECCCCCCEEEEEEE T ss_conf 9999988996847868999889999980899999728971799962887999899975999986999778999984 No 120 >1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle, 5-phospho-D- arabinonate; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 1j3q_A 1j3p_A 1j3r_A* Probab=97.03 E-value=0.0064 Score=34.91 Aligned_cols=57 Identities=26% Similarity=0.346 Sum_probs=34.8 Q ss_pred EEEEEEEECCCCCCC------CCCCC---CCEEEEEEEEE----EECCCC-----CCCCCCEEECCCCCCCCEEC Q ss_conf 799999956898578------88777---64699998778----872786-----11686168858898223264 Q T0582 42 RATSIVRYAPGSRFS------AHTHD---GGEEFIVLDGV----FQDEHG-----DYPAGTYVRNPPTTSHVPGS 98 (222) Q Consensus 42 ~~t~lvr~~pG~~~p------~H~H~---~~ee~~VL~G~----~~d~~~-----~~~~G~y~~~p~gs~H~p~s 98 (222) -...++.+.||.... -|.|. ..|-+|||+|. +.+.++ ...+|++++.|+|..|.... T Consensus 67 l~~~~~~i~PG~~~~e~~~t~gH~H~~~~~~E~~~vl~G~g~~~l~~~~~~~~~~~v~~Gd~v~iP~g~~H~~~N 141 (190) T 1x82_A 67 LNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVN 141 (190) T ss_dssp EEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEE T ss_pred EEEEEEEECCCCCCCCCCCCCCEECCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEECCCCEEEECCCCEEEEEE T ss_conf 388899988985257544565347899997159999966799999852587589996699699986984076673 No 121 >2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A Probab=96.99 E-value=0.0049 Score=35.58 Aligned_cols=90 Identities=18% Similarity=0.135 Sum_probs=56.6 Q ss_pred EEECCCCCCEEC---CCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCC---CCCCCCEEEEEEEEEEECC--C---C-- Q ss_conf 770564663315---8895579995026887057999999568985788---8777646999987788727--8---6-- Q T0582 12 VIDTDQLEWRPS---PMKGVERRMLDRIGGEVARATSIVRYAPGSRFSA---HTHDGGEEFIVLDGVFQDE--H---G-- 78 (222) Q Consensus 12 ~v~~~~~~W~~~---p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~---H~H~~~ee~~VL~G~~~d~--~---~-- 78 (222) ++..+..+-... ...+.....|.........--.++++.|++.... ..|.+.|.+|||+|.+... + + T Consensus 84 v~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~e~~~~~~~~~~~~~~~~~~~H~g~E~~~Vl~G~l~v~~g~~~~~~~ 163 (198) T 2bnm_A 84 IQMPDERPILKGVRDNVDYYVYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKE 163 (198) T ss_dssp CCCGGGCCEECCSTTCSTTEEEEECCCCTTSTTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEE T ss_pred EECCCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCCEE T ss_conf 66266513443136875348999656887898238999998589987765457878679999993212999533256348 Q ss_pred -CCCCCCEEECCCCCCCCEECCCC Q ss_conf -11686168858898223264888 Q T0582 79 -DYPAGTYVRNPPTTSHVPGSAEG 101 (222) Q Consensus 79 -~~~~G~y~~~p~gs~H~p~s~~G 101 (222) ...+||-++.+....|...+.+| T Consensus 164 ~~L~~GDS~~f~~~~pH~~~n~~g 187 (198) T 2bnm_A 164 ALLPTGASMFVEEHVPHAFTAAKG 187 (198) T ss_dssp EEECTTCEEEECTTCCEEEEESTT T ss_pred EEECCCCEEEECCCCCEEEECCCC T ss_conf 998999889988999989883899 No 122 >3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis} Probab=96.97 E-value=0.0048 Score=35.62 Aligned_cols=74 Identities=11% Similarity=0.126 Sum_probs=57.1 Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCCCCCE-EE-EEEEEEEEEC-------------CCEECCCEEEECCCCCCEEEE Q ss_conf 78987208984899999688974477698867-99-9987789828-------------932168617981899802248 Q T0582 135 STSLLHEDERETVTHRKLEPGANLTSEAAGGI-EV-LVLDGDVTVN-------------DEVLGRNAWLRLPEGEALSAT 199 (222) Q Consensus 135 ~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~Ge-Ei-~VLeG~l~d~-------------~~~~~~Gs~i~~P~g~~H~~~ 199 (222) .-..|++++.-.+.++.|+||...|.|.|.+. ++ .||+|++... ...+.+|+....|++..|+.. T Consensus 59 ~R~lI~~~~~f~i~~i~w~PG~~tpiHdH~~~~~~~~Vl~G~~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~~~~iH~i~ 138 (171) T 3eqe_A 59 GRNAIYRNNELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMS 138 (171) T ss_dssp EEEEEEECSSCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEE T ss_pred EEEEEEECCCEEEEEEEECCCCCCCCEECCCCCEEEEEECCEEEEEEEEECCCCCCCCCEEECCCCCEEECCCCCEEEEE T ss_conf 76899848998999999899996676218998189998236589998651366655551354158827862899868888 Q ss_pred EC-CCCCEEE Q ss_conf 88-9882999 Q T0582 200 AG-ARGAKIW 208 (222) Q Consensus 200 a~-~~Gc~i~ 208 (222) .. .+.+..+ T Consensus 139 N~g~~p~vsL 148 (171) T 3eqe_A 139 NPTSERMVSL 148 (171) T ss_dssp CCSSSCEEEE T ss_pred CCCCCCEEEE T ss_conf 5999988999 No 123 >1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A Probab=96.92 E-value=0.00064 Score=40.75 Aligned_cols=51 Identities=18% Similarity=0.295 Sum_probs=25.8 Q ss_pred CCCCCCCEEE-EEEEEE----EEECCC----EECCCEEEECCCCCCEEEEECCCCCEEEE Q ss_conf 7769886799-998778----982893----21686179818998022488898829999 Q T0582 159 TSEAAGGIEV-LVLDGD----VTVNDE----VLGRNAWLRLPEGEALSATAGARGAKIWM 209 (222) Q Consensus 159 p~h~h~GeEi-~VLeG~----l~d~~~----~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~v 209 (222) ..|.|..+|+ ||++|+ +.+++. .+.+||+|..|+|..|.+..+++-..+.| T Consensus 94 ~EH~H~~dEvr~vv~G~g~f~~~~~d~~~~v~~~~GDlI~VPag~~H~F~~~~~~~~~ai 153 (179) T 1zrr_A 94 NEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAI 153 (179) T ss_dssp SCBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEE T ss_pred CCEECCCCEEEEEEECCEEEEEECCCEEEEEEECCCCEEEECCCCEEECCCCCCCCEEEE T ss_conf 460289848999995919999945980899997489889969998681215899888999 No 124 >1vr3_A Acireductone dioxygenase; 13543033, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.06A {Mus musculus} SCOP: b.82.1.6 Probab=96.91 E-value=0.0023 Score=37.49 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=46.7 Q ss_pred EEEEEEECCCC----------CCCCCCCCCEEE-EEEEEEEE----ECCC-----EECCCEEEECCCCCCEEEEECCCCC Q ss_conf 89999968897----------447769886799-99877898----2893-----2168617981899802248889882 Q T0582 146 TVTHRKLEPGA----------NLTSEAAGGIEV-LVLDGDVT----VNDE-----VLGRNAWLRLPEGEALSATAGARGA 205 (222) Q Consensus 146 ~v~L~r~~pG~----------~~p~h~h~GeEi-~VLeG~l~----d~~~-----~~~~Gs~i~~P~g~~H~~~a~~~Gc 205 (222) ..-++.+.|.. .+..|.|..+|+ |||+|+.. ++++ .+.+||.|.+|+|..|....+++.. T Consensus 75 ~~D~i~l~p~~~pn~e~~~~~F~~eH~H~ddEir~vl~G~G~F~vr~~~~~~irI~~~~GDlI~iPag~~H~Ftl~~~~~ 154 (191) T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNY 154 (191) T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCC T ss_pred EEEEEEECCCCCCCHHHHHHHHHCCEECCCCEEEEEEECCEEEEEECCCCCEEEEEEECCCEEEECCCCCEEEECCCCCC T ss_conf 25799988886899899998741233578756999996779999977998499999926989997999837400689887 Q ss_pred EEEEE Q ss_conf 99998 Q T0582 206 KIWMK 210 (222) Q Consensus 206 ~i~vK 210 (222) ...++ T Consensus 155 ikaiR 159 (191) T 1vr3_A 155 VKAMR 159 (191) T ss_dssp EEEEE T ss_pred EEEEE T ss_conf 89999 No 125 >1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle, 5-phospho-D- arabinonate; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 1j3q_A 1j3p_A 1j3r_A* Probab=96.84 E-value=0.0075 Score=34.50 Aligned_cols=65 Identities=15% Similarity=0.083 Sum_probs=44.8 Q ss_pred CCEEEEEEECCCCCCCC------CCC---CCEEE-EEEEEEE----EECC-----CEECCCEEEECCCCCCEEEEECCCC Q ss_conf 84899999688974477------698---86799-9987789----8289-----3216861798189980224888988 Q T0582 144 RETVTHRKLEPGANLTS------EAA---GGIEV-LVLDGDV----TVND-----EVLGRNAWLRLPEGEALSATAGARG 204 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~------h~h---~GeEi-~VLeG~l----~d~~-----~~~~~Gs~i~~P~g~~H~~~a~~~G 204 (222) +-.+-+..++||..... |.| ..+|+ +||+|+. .+.+ -.+.+||.+..|+|..|+.....+. T Consensus 66 ~l~~~~~~i~PG~~~~e~~~t~gH~H~~~~~~E~~~vl~G~g~~~l~~~~~~~~~~~v~~Gd~v~iP~g~~H~~~N~G~e 145 (190) T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDE 145 (190) T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSS T ss_pred CEEEEEEEECCCCCCCCCCCCCCEECCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEECCCCEEEECCCCEEEEEECCCC T ss_conf 63888999889852575445653478999971599999667999998525875899966996999869840766738989 Q ss_pred CEEE Q ss_conf 2999 Q T0582 205 AKIW 208 (222) Q Consensus 205 c~i~ 208 (222) -+++ T Consensus 146 ~l~~ 149 (190) T 1x82_A 146 PFIF 149 (190) T ss_dssp CEEE T ss_pred CEEE T ss_conf 9899 No 126 >1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A* Probab=96.82 E-value=0.004 Score=36.08 Aligned_cols=78 Identities=14% Similarity=0.087 Sum_probs=56.7 Q ss_pred CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE----ECC----CEECCCEEEECCCCCCEEEEECC Q ss_conf 8627898720898489999968897447769886799-99877898----289----32168617981899802248889 Q T0582 132 EGISTSLLHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT----VND----EVLGRNAWLRLPEGEALSATAGA 202 (222) Q Consensus 132 ~Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~----d~~----~~~~~Gs~i~~P~g~~H~~~a~~ 202 (222) |=|--+-||.+..- +.++=-.|+++-..|.|.++|+ |+|+|++. +++ -.+.+||...+|++..|+|...+ T Consensus 23 PPV~Nk~~~~~~~~-ivm~VGGPN~R~d~H~h~~eEwfYqlkG~~~l~v~~dg~~~~i~I~eGDi~llP~~vpHSPqR~~ 101 (174) T 1yfu_A 23 PPVGNRQVWQDSDF-IVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174) T ss_dssp TTTCEEESSSSCSE-EEEEECSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCC T ss_pred CCCCCCEEECCCCE-EEEEECCCCCCCCCEECCCHHEEEEECCEEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCC T ss_conf 99787315528987-99995168866743017700323786245999997089738863389868971899987866566 Q ss_pred CCCEEEEE Q ss_conf 88299998 Q T0582 203 RGAKIWMK 210 (222) Q Consensus 203 ~Gc~i~vK 210 (222) .|..-+|. T Consensus 102 ~~tiGlVi 109 (174) T 1yfu_A 102 AGSACLVI 109 (174) T ss_dssp TTCEEEEE T ss_pred CCCCEEEE T ss_conf 88520899 No 127 >2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, plant protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B Probab=96.69 E-value=0.0036 Score=36.37 Aligned_cols=68 Identities=16% Similarity=0.150 Sum_probs=50.4 Q ss_pred CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE----ECCC----EECCCEEEECCCCCCEEEEECCCC-CEEEEEE Q ss_conf 8489999968897447769886799-99877898----2893----216861798189980224888988-2999983 Q T0582 144 RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT----VNDE----VLGRNAWLRLPEGEALSATAGARG-AKIWMKT 211 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~----d~~~----~~~~Gs~i~~P~g~~H~~~a~~~G-c~i~vKT 211 (222) +-++..+.++|++.+..|++...|+ ||++|+.. +.+. .+.+||.+..|+|..|-.....++ .+++++- T Consensus 85 ~~~~~~~~~~P~~l~lP~~~~a~~~~yV~~G~g~~g~v~~~~~~~~~l~~GDv~~~PaG~~~~~~N~~~~e~l~ii~~ 162 (445) T 2cav_A 85 DYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKF 162 (445) T ss_dssp TEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEE T ss_pred CEEEEEEEECCCEEECCCCCCCCEEEEEEECCEEEEEEECCCCEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEEE T ss_conf 169999995798186775489873899995838999996998358981488789988997699996699912999993 No 128 >3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein; 2.40A {Prunus dulcis} PDB: 3ehk_A Probab=96.62 E-value=0.0044 Score=35.87 Aligned_cols=69 Identities=14% Similarity=0.236 Sum_probs=54.2 Q ss_pred CCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEE----ECCC------EECCCEEEECCCCCCEEEEECCCCCEEE-EE Q ss_conf 84899999688974477698-86799-99877898----2893------2168617981899802248889882999-98 Q T0582 144 RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VNDE------VLGRNAWLRLPEGEALSATAGARGAKIW-MK 210 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~----d~~~------~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~-vK 210 (222) +-.+.++.+.||+.++.|.| ...|+ ||++|+.. +.++ .+.+|+.+..|.|..|.-.++.+|+..+ ++ T Consensus 393 ~lsa~~v~L~pgam~~PHwhp~A~ei~yV~~G~g~vqvV~~~G~~v~~~~l~~GdvfVVPqg~~~~~~a~~egle~v~f~ 472 (531) T 3fz3_A 393 RLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAGNQGFEYFAFK 472 (531) T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE T ss_pred CCEEEEEEECCCCEEEEEECCCCCEEEEEEECEEEEEEEECCCCEEEEEEECCCCEEEECCCCEEEEEECCCCEEEEEEE T ss_conf 61058987438967611546998889999926289999968998798638738878999999879998079986999996 Q ss_pred EC Q ss_conf 36 Q T0582 211 TG 212 (222) Q Consensus 211 TG 212 (222) |- T Consensus 473 tn 474 (531) T 3fz3_A 473 TE 474 (531) T ss_dssp SS T ss_pred CC T ss_conf 47 No 129 >3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus} Probab=96.58 E-value=0.03 Score=30.97 Aligned_cols=68 Identities=18% Similarity=0.249 Sum_probs=52.9 Q ss_pred CCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEE----ECCC------EECCCEEEECCCCCCEEEEECCCCCEEE-EE Q ss_conf 84899999688974477698-86799-99877898----2893------2168617981899802248889882999-98 Q T0582 144 RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VNDE------VLGRNAWLRLPEGEALSATAGARGAKIW-MK 210 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~----d~~~------~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~-vK 210 (222) +-.+.++.+.||+-...|.| ...|| ||++|+.. +..+ .+.+|+.+..|.+..|.-.++.+|+..+ +| T Consensus 322 ~ls~~~v~L~~gam~~PHwn~~A~ei~yV~~G~grvqvV~~~G~~~~~~~l~~G~v~vvPqg~~~~~~A~~e~~e~v~F~ 401 (466) T 3kgl_A 322 RLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFK 401 (466) T ss_dssp TCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEE T ss_pred CCEEEEEEECCCCCCCCEECCCCCEEEEEEECEEEEEEECCCCCEEEEEEECCCCEEEECCCCEEEEECCCCCEEEEEEE T ss_conf 53059999778963076257888889999917288999879997897337748708998899789997189885999995 Q ss_pred E Q ss_conf 3 Q T0582 211 T 211 (222) Q Consensus 211 T 211 (222) | T Consensus 402 t 402 (466) T 3kgl_A 402 T 402 (466) T ss_dssp S T ss_pred C T ss_conf 4 No 130 >3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea} Probab=96.45 E-value=0.0045 Score=35.77 Aligned_cols=69 Identities=14% Similarity=0.125 Sum_probs=54.3 Q ss_pred CCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEEE----ECCC------EECCCEEEECCCCCCEEEEECCCCCEEE-EE Q ss_conf 84899999688974477698-86799-99877898----2893------2168617981899802248889882999-98 Q T0582 144 RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VNDE------VLGRNAWLRLPEGEALSATAGARGAKIW-MK 210 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l~----d~~~------~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~-vK 210 (222) +..+.++.+.||+..+.|.| ...|+ ||++|+.. +..+ .+.+|+.+..|.|..|...++.+|+.++ ++ T Consensus 371 ~ls~~~v~L~~gam~~PHwh~~A~ei~yV~~G~g~vqvV~~~G~~v~~~~l~~Gdv~vvPqg~~~~~~a~~e~~e~v~f~ 450 (510) T 3c3v_A 371 GLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQSDNFEYVAFK 450 (510) T ss_dssp TCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEE T ss_pred CCCEEEEEECCCCCCCCEECCCCCEEEEEEECCEEEEEECCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCEEEEEEE T ss_conf 52169987648965155036888889999836189999808997687338728828999999889998279985999997 Q ss_pred EC Q ss_conf 36 Q T0582 211 TG 212 (222) Q Consensus 211 TG 212 (222) |. T Consensus 451 ts 452 (510) T 3c3v_A 451 TD 452 (510) T ss_dssp SS T ss_pred CC T ss_conf 56 No 131 >3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum} Probab=96.38 E-value=0.0076 Score=34.47 Aligned_cols=69 Identities=17% Similarity=0.181 Sum_probs=54.1 Q ss_pred CCEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEE----EECCC------EECCCEEEECCCCCCEEEEECCCCCEEE-EE Q ss_conf 84899999688974477698-86799-9987789----82893------2168617981899802248889882999-98 Q T0582 144 RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDV----TVNDE------VLGRNAWLRLPEGEALSATAGARGAKIW-MK 210 (222) Q Consensus 144 ~e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l----~d~~~------~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~-vK 210 (222) +-.+.++.+.||+-.+.|.| ...|| ||++|+. .+.++ .+.+|+.+..|.+..|.-.++.+|+..+ +| T Consensus 357 ~ls~~~v~L~~gam~~PHwn~~A~ei~yV~~G~g~vqvV~~~G~~~~~~~l~~Gdv~vvPqg~~~~~~a~~e~~e~v~F~ 436 (496) T 3ksc_A 357 KLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAFK 436 (496) T ss_dssp TCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEE T ss_pred CCEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCEEEEEEE T ss_conf 73279998758963177207887789999726289999848997798548758858999999879998079986999997 Q ss_pred EC Q ss_conf 36 Q T0582 211 TG 212 (222) Q Consensus 211 TG 212 (222) |- T Consensus 437 tn 438 (496) T 3ksc_A 437 TN 438 (496) T ss_dssp SS T ss_pred CC T ss_conf 56 No 132 >2gm6_A Cysteine dioxygenase type I; structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; 1.84A {Ralstonia eutropha JMP134} SCOP: b.82.1.19 Probab=96.22 E-value=0.04 Score=30.21 Aligned_cols=72 Identities=18% Similarity=0.144 Sum_probs=48.0 Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCC------C---------CCCCCC--EEEC Q ss_conf 9557999502688705799999956898578887776469999877887278------6---------116861--6885 Q T0582 26 KGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQDEH------G---------DYPAGT--YVRN 88 (222) Q Consensus 26 ~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d~~------~---------~~~~G~--y~~~ 88 (222) .+..|.+|+++..+.- ...++-+.||...|.|.|....-+.||+|.+.... + .+.+|+ |+.- T Consensus 64 ~~y~r~lLy~dp~~~f-~l~~i~W~pGq~tpiHdH~~w~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~~l~~G~v~~~~~ 142 (208) T 2gm6_A 64 EYYQQMLLHCDSAERF-SIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSP 142 (208) T ss_dssp SSCEEEEEEECTTSSC-EEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBT T ss_pred CCEEEEEEEECCCCCE-EEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEECCCCEEEECC T ss_conf 7627899998899998-999997589988989868854189997480999985117998742103308966998899788 Q ss_pred CCCCCCCEEC Q ss_conf 8898223264 Q T0582 89 PPTTSHVPGS 98 (222) Q Consensus 89 p~gs~H~p~s 98 (222) +.|..|...- T Consensus 143 ~~gdIH~v~N 152 (208) T 2gm6_A 143 TVGDIHRVHN 152 (208) T ss_dssp TTBCCEEEEE T ss_pred CCCCEEEECC T ss_conf 9998888356 No 133 >1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices, merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A Probab=96.18 E-value=0.0081 Score=34.29 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=49.8 Q ss_pred CCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE----CCC----EECCCEEEECCCCCCEEEEE-CCCCCEEEEE Q ss_conf 98489999968897447769886799-998778982----893----21686179818998022488-8988299998 Q T0582 143 ERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV----NDE----VLGRNAWLRLPEGEALSATA-GARGAKIWMK 210 (222) Q Consensus 143 ~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d----~~~----~~~~Gs~i~~P~g~~H~~~a-~~~Gc~i~vK 210 (222) ..-++.+++++||+.+..|+...+|+ ||++|+... .++ .+.+||.+..|+|..|.... +.+..+.++. T Consensus 39 ~~~~v~~~~i~p~~l~~Ph~~~a~ev~yV~~G~g~v~~v~~~~~~~~~l~~Gdv~~iP~G~~h~~~N~~~~~~l~~~~ 116 (178) T 1dgw_A 39 RDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILK 116 (178) T ss_dssp TTEEEEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEE T ss_pred CCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEECCCCEEEECCCCEEEEEECCCCCCEEEEE T ss_conf 326999999889968478689998899999808999997289717999628879998999759999869997789999 No 134 >1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A Probab=96.16 E-value=0.0066 Score=34.82 Aligned_cols=69 Identities=13% Similarity=0.195 Sum_probs=50.2 Q ss_pred EEEEEEECCCC---------CCCCCCCCCCEEEEEEEEE----EECCCC----CCCCCCEEECCCCCCCCEE-CCCCEEE Q ss_conf 99999956898---------5788877764699998778----872786----1168616885889822326-4888089 Q T0582 43 ATSIVRYAPGS---------RFSAHTHDGGEEFIVLDGV----FQDEHG----DYPAGTYVRNPPTTSHVPG-SAEGCTI 104 (222) Q Consensus 43 ~t~lvr~~pG~---------~~p~H~H~~~ee~~VL~G~----~~d~~~----~~~~G~y~~~p~gs~H~p~-s~~Gc~~ 104 (222) ..-++++.|+. -+..|.|+..|-.||++|. +.+++. .+.+|+++..|+|+.|--- .++-... T Consensus 72 ~~D~i~l~p~~p~~~~l~~kF~~EH~H~~dEvr~vv~G~g~f~~~~~d~~~~v~~~~GDlI~VPag~~H~F~~~~~~~~~ 151 (179) T 1zrr_A 72 SWDVISLRADNPQKEALREKFLNEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFT 151 (179) T ss_dssp EEEEECCCTTCTHHHHHHHHHHSCBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCE T ss_pred EEEEEEECCCCCCHHHHHHHHCCCEECCCCEEEEEEECCEEEEEECCCEEEEEEECCCCEEEECCCCEEECCCCCCCCEE T ss_conf 48899868999888999987334602898489999959199999459808999974898899699986812158998889 Q ss_pred EEEEECC Q ss_conf 9990027 Q T0582 105 FVKLWQF 111 (222) Q Consensus 105 ~vkl~q~ 111 (222) +++|-+- T Consensus 152 aiRlF~~ 158 (179) T 1zrr_A 152 AIRIFDN 158 (179) T ss_dssp EEEEECC T ss_pred EEEEECC T ss_conf 9998648 No 135 >1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A* Probab=96.12 E-value=0.016 Score=32.58 Aligned_cols=66 Identities=18% Similarity=0.165 Sum_probs=40.5 Q ss_pred CEEEEEEECCCCCCCCCCCCCEEE-EEEEEEE----EECCC----EECCCEEEECCCCCCEEEEECCCC-CEEEEE Q ss_conf 489999968897447769886799-9987789----82893----216861798189980224888988-299998 Q T0582 145 ETVTHRKLEPGANLTSEAAGGIEV-LVLDGDV----TVNDE----VLGRNAWLRLPEGEALSATAGARG-AKIWMK 210 (222) Q Consensus 145 e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l----~d~~~----~~~~Gs~i~~P~g~~H~~~a~~~G-c~i~vK 210 (222) -++..+.++|.+.+-.|+....++ ||++|.- .+.++ .+.+||.+..|+|+.|-.....++ .++.++ T Consensus 49 yrv~~~~~~P~~l~lP~~~nA~~l~yV~qGrg~ig~V~p~~~es~~l~~GDV~~iPAG~~~~~~N~gd~e~l~iv~ 124 (416) T 1uij_A 49 YRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIW 124 (416) T ss_dssp CEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEE T ss_pred EEEEEEEECCCCEECCCCCCCCEEEEEEECEEEEEEEECCCEEEEECCCCCEEEECCCCEEEEEECCCCCCEEEEE T ss_conf 6999999779827677647998699999188999999689746886168877997899669999579997689999 No 136 >2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli} Probab=95.89 E-value=0.0082 Score=34.27 Aligned_cols=61 Identities=18% Similarity=0.357 Sum_probs=40.6 Q ss_pred EEECCCCCCCCCCCCCEEE--EEEEEEEEEC-----CCEECCCEEE--ECCCCCCEEEEEC-CCC----CEEEEE Q ss_conf 9968897447769886799--9987789828-----9321686179--8189980224888-988----299998 Q T0582 150 RKLEPGANLTSEAAGGIEV--LVLDGDVTVN-----DEVLGRNAWL--RLPEGEALSATAG-ARG----AKIWMK 210 (222) Q Consensus 150 ~r~~pG~~~p~h~h~GeEi--~VLeG~l~d~-----~~~~~~Gs~i--~~P~g~~H~~~a~-~~G----c~i~vK 210 (222) -+++||.-++.|.|.+.|| |||+|++... .+...+|+.- ..-.|..|+-... +++ -.|||. T Consensus 69 D~v~Pg~GF~~HPHr~~EivTyvl~G~l~H~DS~Gn~~~i~~G~vQ~MsAGsGI~HSE~n~~~~~~~~~lQIWI~ 143 (256) T 2vec_A 69 EVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD 143 (256) T ss_dssp EEECTTCEEEEECCSSEEEEEEEEESEEEEEETTSCEEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEE T ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEECCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEEC T ss_conf 571799879998999929999998518998587999989789938999589982884641799886289998766 No 137 >3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein; 2.40A {Prunus dulcis} PDB: 3ehk_A Probab=95.75 E-value=0.015 Score=32.70 Aligned_cols=63 Identities=16% Similarity=0.258 Sum_probs=43.0 Q ss_pred EEEEEEECCCCCCCCCCCCCC-EEEEEEEEEEE----CCCC------CCCCCCEEECCCCCCCCEE-CCCCEEEE Q ss_conf 999999568985788877764-69999877887----2786------1168616885889822326-48880899 Q T0582 43 ATSIVRYAPGSRFSAHTHDGG-EEFIVLDGVFQ----DEHG------DYPAGTYVRNPPTTSHVPG-SAEGCTIF 105 (222) Q Consensus 43 ~t~lvr~~pG~~~p~H~H~~~-ee~~VL~G~~~----d~~~------~~~~G~y~~~p~gs~H~p~-s~~Gc~~~ 105 (222) ....+.+.||+-+++|.|+-. |-+||++|... +.+| +..+|+.++-|.|..|.-. +.+|+.++ T Consensus 395 sa~~v~L~pgam~~PHwhp~A~ei~yV~~G~g~vqvV~~~G~~v~~~~l~~GdvfVVPqg~~~~~~a~~egle~v 469 (531) T 3fz3_A 395 SAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAGNQGFEYF 469 (531) T ss_dssp EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEE T ss_pred EEEEEEECCCCEEEEEECCCCCEEEEEEECEEEEEEEECCCCEEEEEEECCCCEEEECCCCEEEEEECCCCEEEE T ss_conf 058987438967611546998889999926289999968998798638738878999999879998079986999 No 138 >1vr3_A Acireductone dioxygenase; 13543033, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.06A {Mus musculus} SCOP: b.82.1.6 Probab=95.72 E-value=0.048 Score=29.78 Aligned_cols=86 Identities=20% Similarity=0.162 Sum_probs=59.5 Q ss_pred CCEEEEEEECCCCC-----------EE-EEEEEEEECCCC----------CCCCCCCCCCEEEEEEEEEE----ECCCCC Q ss_conf 95579995026887-----------05-799999956898----------57888777646999987788----727861 Q T0582 26 KGVERRMLDRIGGE-----------VA-RATSIVRYAPGS----------RFSAHTHDGGEEFIVLDGVF----QDEHGD 79 (222) Q Consensus 26 ~Gv~~~~L~~~~~e-----------~g-~~t~lvr~~pG~----------~~p~H~H~~~ee~~VL~G~~----~d~~~~ 79 (222) -||....|+.++-+ .| ...-++.+.|+. -+..|.|...|-.|||+|+- .+.++. T Consensus 46 lGV~y~~~~~d~~~~~~~l~~l~~ergY~~~D~i~l~p~~~pn~e~~~~~F~~eH~H~ddEir~vl~G~G~F~vr~~~~~ 125 (191) T 1vr3_A 46 LGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDK 125 (191) T ss_dssp TTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTHHHHHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSC T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCEECCCCEEEEEEECCEEEEEECCCCC T ss_conf 29589973752357648899999846996257999888868998999987412335787569999967799999779984 Q ss_pred -----CCCCCEEECCCCCCCCEE-CCCCEEEEEEEECC Q ss_conf -----168616885889822326-48880899990027 Q T0582 80 -----YPAGTYVRNPPTTSHVPG-SAEGCTIFVKLWQF 111 (222) Q Consensus 80 -----~~~G~y~~~p~gs~H~p~-s~~Gc~~~vkl~q~ 111 (222) +.+|+++..|+|..|--. +++-....++|-+= T Consensus 126 ~irI~~~~GDlI~iPag~~H~Ftl~~~~~ikaiRlF~~ 163 (191) T 1vr3_A 126 WIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVG 163 (191) T ss_dssp EEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESS T ss_pred EEEEEEECCCEEEECCCCCEEEECCCCCCEEEEEEECC T ss_conf 99999926989997999837400689887899999668 No 139 >3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A Probab=95.66 E-value=0.046 Score=29.87 Aligned_cols=69 Identities=10% Similarity=0.067 Sum_probs=46.7 Q ss_pred EEEEEEECCCCCCCCCCCCCEE-EEEEEEEEEEC--------CCEECCCEEEECCCCCCEEEEECCCCCEEEEEE-CCCC Q ss_conf 8999996889744776988679-99987789828--------932168617981899802248889882999983-6857 Q T0582 146 TVTHRKLEPGANLTSEAAGGIE-VLVLDGDVTVN--------DEVLGRNAWLRLPEGEALSATAGARGAKIWMKT-GHLR 215 (222) Q Consensus 146 ~v~L~r~~pG~~~p~h~h~GeE-i~VLeG~l~d~--------~~~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vKT-GHL~ 215 (222) ....++..+......+.|.|+| ++|++|.++.. .-.+.+||-++.++...|... ..|.++=++. |++. T Consensus 335 ~~l~l~~~~~~~~e~~~h~GeE~~~VL~G~VeL~ie~~~G~e~~~L~pGDSlYfds~vpH~f~--n~Gtvlkl~~G~~i~ 412 (443) T 3g7d_A 335 VGSFLRVDADGRGADLIDHAENHYVVTEGRLTLEWDGPDGPASVELEPDGSAWTGPFVRHRWH--GTGTVLKFGSGAHLG 412 (443) T ss_dssp EEEEEEEC------CBCCSSEEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEE--SSEEEEEEEECSTTC T ss_pred EEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEECCCCEEEECCCCCCCCC--CCCEEEEEECCCCCC T ss_conf 789997788888774447971899999879999998478836999769977998799971337--587289984488557 Q ss_pred C Q ss_conf 6 Q T0582 216 F 216 (222) Q Consensus 216 ~ 216 (222) . T Consensus 413 ~ 413 (443) T 3g7d_A 413 Y 413 (443) T ss_dssp H T ss_pred C T ss_conf 7 No 140 >2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A Probab=95.57 E-value=0.028 Score=31.12 Aligned_cols=58 Identities=10% Similarity=0.107 Sum_probs=31.7 Q ss_pred EEEEEECCCCCCCCCCCCCC-EEEEEEEEEEE----CCC------------------CCCCCCCEEECCCCCCCCEECCC Q ss_conf 99999568985788877764-69999877887----278------------------61168616885889822326488 Q T0582 44 TSIVRYAPGSRFSAHTHDGG-EEFIVLDGVFQ----DEH------------------GDYPAGTYVRNPPTTSHVPGSAE 100 (222) Q Consensus 44 t~lvr~~pG~~~p~H~H~~~-ee~~VL~G~~~----d~~------------------~~~~~G~y~~~p~gs~H~p~s~~ 100 (222) ..++.+.||+-+.+|+|+-. +-.||++|.-. +.+ ++..+|+.+.-|.|..+.-.+.+ T Consensus 268 a~~v~L~~GAM~~PHwn~nA~ei~yV~rG~grvq~v~~~g~~~~~~~~~~~~~~~f~~~l~~G~vfVvP~g~p~~~~as~ 347 (434) T 2ea7_A 268 ISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATS 347 (434) T ss_dssp EEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESS T ss_pred EEEEEECCCCEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEECCC T ss_conf 79998737834256116898789999837179999768987410023456522677617868868999899926788179 Q ss_pred C Q ss_conf 8 Q T0582 101 G 101 (222) Q Consensus 101 G 101 (222) + T Consensus 348 ~ 348 (434) T 2ea7_A 348 N 348 (434) T ss_dssp S T ss_pred C T ss_conf 8 No 141 >3bcw_A Uncharacterized protein; NP_887725.1, domain of unknown function with A RMLC-like cupin fold; 1.60A {Bordetella bronchiseptica RB50} Probab=95.43 E-value=0.046 Score=29.87 Aligned_cols=76 Identities=18% Similarity=0.202 Sum_probs=40.4 Q ss_pred CEEEEEEECCC--CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEE--ECCC---EECCCEEEECCCCCCEEEEECCCC Q ss_conf 62789872089--8489999968897447769886799-99877898--2893---216861798189980224888988 Q T0582 133 GISTSLLHEDE--RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVT--VNDE---VLGRNAWLRLPEGEALSATAGARG 204 (222) Q Consensus 133 Gv~~~~L~~~~--~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~--d~~~---~~~~Gs~i~~P~g~~H~~~a~~~G 204 (222) -.....++.+. .-.+-+....||... .+.+...|+ +||||++. ++++ .+.+||.+..|+|..-+..+.+.- T Consensus 35 ~~~~~~~~~~~~g~~~~GvW~~tpG~~~-~~~~~~dE~~~iLEG~v~it~~dG~~~~~~aGD~~~ip~G~~g~W~v~e~v 113 (123) T 3bcw_A 35 SFRTVTAFEGGQGKVESGVWESTSGSFQ-SNTTGYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMPEGYTGRWEVDRHV 113 (123) T ss_dssp CEEEEEEEEETTTTEEEEEEEEEEEEEE-CCCTTEEEEEEEEEEEEEEECTTCCEEEEETTCEEEECTTCCCEEEEEEEE T ss_pred CEEEEEEEECCCCCEEEEEEECCCCEEE-EECCCCCEEEEEEEEEEEEECCCCCEEEECCCCEEEECCCCEEEEEECCCE T ss_conf 2568998818999999999974695837-654886459999971899991999899985998999999998999978428 Q ss_pred CEEEE Q ss_conf 29999 Q T0582 205 AKIWM 209 (222) Q Consensus 205 c~i~v 209 (222) -.+|+ T Consensus 114 rK~yv 118 (123) T 3bcw_A 114 KKIYF 118 (123) T ss_dssp EEEEE T ss_pred EEEEE T ss_conf 99999 No 142 >3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum} Probab=95.29 E-value=0.031 Score=30.88 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=48.5 Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEEE----E-----------------------CCCC---CCCCCCEEECCCCCCC Q ss_conf 99995689857888777646999987788----7-----------------------2786---1168616885889822 Q T0582 45 SIVRYAPGSRFSAHTHDGGEEFIVLDGVF----Q-----------------------DEHG---DYPAGTYVRNPPTTSH 94 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee~~VL~G~~----~-----------------------d~~~---~~~~G~y~~~p~gs~H 94 (222) +-..+.|.+-+-++..+....+||+.|.= . |.+. .+..||.+..|+|+.| T Consensus 49 ~R~tieP~gL~LP~y~nap~l~yV~qG~G~~G~v~PGcpetf~~~~~~~~~~~~~~~D~hqkv~~lr~GDViaiPAG~~~ 128 (496) T 3ksc_A 49 SRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVF 128 (496) T ss_dssp EEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTEEEEECTTCEE T ss_pred EEEEECCCCEECCCCCCCCEEEEEEEEEEEEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEE T ss_conf 68877578320675248985899975469999885798002113210122233321244676434665998997798568 Q ss_pred CEEC-CCCEEEEEEEEC Q ss_conf 3264-888089999002 Q T0582 95 VPGS-AEGCTIFVKLWQ 110 (222) Q Consensus 95 ~p~s-~~Gc~~~vkl~q 110 (222) =-+. .+.-++.|++.. T Consensus 129 w~yN~g~~~lv~v~i~d 145 (496) T 3ksc_A 129 WMYNDQDTPVIAVSLTD 145 (496) T ss_dssp EEEECSSSCEEEEEEEC T ss_pred EEEECCCCCEEEEEEEE T ss_conf 99958898579999960 No 143 >2gm6_A Cysteine dioxygenase type I; structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; 1.84A {Ralstonia eutropha JMP134} SCOP: b.82.1.19 Probab=95.16 E-value=0.13 Score=27.26 Aligned_cols=72 Identities=15% Similarity=0.032 Sum_probs=49.5 Q ss_pred CEEEEEEECCC--CCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE------C---------CCEECCCEEEE--CCC Q ss_conf 62789872089--8489999968897447769886799-998778982------8---------93216861798--189 Q T0582 133 GISTSLLHEDE--RETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV------N---------DEVLGRNAWLR--LPE 192 (222) Q Consensus 133 Gv~~~~L~~~~--~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d------~---------~~~~~~Gs~i~--~P~ 192 (222) +-+..+||.++ .-.+.++-|.||...|.|.|+.-.+ .||+|++.. + ...+.+|+-.. -+. T Consensus 65 ~y~r~lLy~dp~~~f~l~~i~W~pGq~tpiHdH~~w~~~~vl~G~l~e~~y~~~~~~~~~~~~~~~~l~~G~v~~~~~~~ 144 (208) T 2gm6_A 65 YYQQMLLHCDSAERFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTV 144 (208) T ss_dssp SCEEEEEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTT T ss_pred CEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCC T ss_conf 62789999889999899999758998898986885418999748099998511799874210330896699889978899 Q ss_pred CCCEEEEE-CCCC Q ss_conf 98022488-8988 Q T0582 193 GEALSATA-GARG 204 (222) Q Consensus 193 g~~H~~~a-~~~G 204 (222) +..|+... ..+. T Consensus 145 gdIH~v~N~~~~~ 157 (208) T 2gm6_A 145 GDIHRVHNAYDDR 157 (208) T ss_dssp BCCEEEEESCSSS T ss_pred CCEEEECCCCCCC T ss_conf 9888835679997 No 144 >2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A* Probab=95.08 E-value=0.055 Score=29.45 Aligned_cols=55 Identities=15% Similarity=0.170 Sum_probs=22.7 Q ss_pred EEEEEEECCCCCCCCCCCCCEE-EEEEEEEE----EECCC----------EECCCEEEECCCCCCEEEEE Q ss_conf 8999996889744776988679-99987789----82893----------21686179818998022488 Q T0582 146 TVTHRKLEPGANLTSEAAGGIE-VLVLDGDV----TVNDE----------VLGRNAWLRLPEGEALSATA 200 (222) Q Consensus 146 ~v~L~r~~pG~~~p~h~h~GeE-i~VLeG~l----~d~~~----------~~~~Gs~i~~P~g~~H~~~a 200 (222) ++..++++|.+.+-.|+....+ +||++|.- .+.++ .+.+||-+..|+|+.|-... T Consensus 53 rv~~~~~~P~~l~lP~~~nA~~l~yV~qG~G~~g~v~pg~~~s~~~~~~~~l~~GDv~~iPAG~~~~~~N 122 (397) T 2phl_A 53 RLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVN 122 (397) T ss_dssp EEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEE T ss_pred EEEEEEECCCEEECCCCCCCCEEEEEEECEEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCEEEEEE T ss_conf 9999997898276765379996999991889999997999634543100465558879988997699995 No 145 >2p17_A Pirin-like protein; GK1651, structural genomics, southeast collaboratory for structural genomics, protein structure initiative; 1.52A {Geobacillus kaustophilus HTA426} Probab=95.02 E-value=0.042 Score=30.09 Aligned_cols=11 Identities=9% Similarity=0.577 Sum_probs=4.9 Q ss_pred EEEECCCCCCE Q ss_conf 67705646633 Q T0582 11 VVIDTDQLEWR 21 (222) Q Consensus 11 ~~v~~~~~~W~ 21 (222) .++.+.++.|+ T Consensus 81 ~~i~~G~vq~M 91 (277) T 2p17_A 81 STLGPGDVQWM 91 (277) T ss_dssp EEECTTCEEEE T ss_pred EEECCCCEEEE T ss_conf 47889857998 No 146 >2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant protein; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A Probab=95.01 E-value=0.028 Score=31.19 Aligned_cols=64 Identities=14% Similarity=0.171 Sum_probs=46.6 Q ss_pred EEECCCCCCCCCCCCCCEEEEEEEEE--E--E---------------------------CCC---CCCCCCCEEECCCCC Q ss_conf 99568985788877764699998778--8--7---------------------------278---611686168858898 Q T0582 47 VRYAPGSRFSAHTHDGGEEFIVLDGV--F--Q---------------------------DEH---GDYPAGTYVRNPPTT 92 (222) Q Consensus 47 vr~~pG~~~p~H~H~~~ee~~VL~G~--~--~---------------------------d~~---~~~~~G~y~~~p~gs 92 (222) ..+.|.+-+-++..+....+||+.|. + . |++ ..+..||-+..|+|+ T Consensus 50 ~tieP~gL~LP~y~nap~l~yV~qGrG~~G~v~Pgcpetf~~~~~~~~~~~~~~~~~~~d~hqkv~~lr~GDViaiPAG~ 129 (493) T 2d5f_A 50 RTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPPGV 129 (493) T ss_dssp EEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEESCEEEEETTEEEEECTTC T ss_pred EEECCCCEECCCCCCCCEEEEEEECEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHEECCCCCCEEEECCCC T ss_conf 88757845167413898689999377999987689823001522123444554333332123314504778889978997 Q ss_pred CCCEEC-CCCEEEEEEEEC Q ss_conf 223264-888089999002 Q T0582 93 SHVPGS-AEGCTIFVKLWQ 110 (222) Q Consensus 93 ~H~p~s-~~Gc~~~vkl~q 110 (222) .|=-+. .+--+++|+|.. T Consensus 130 ~~w~yNdg~~~Lv~v~l~d 148 (493) T 2d5f_A 130 PYWTYNTGDEPVVAISLLD 148 (493) T ss_dssp CEEEEECSSSCEEEEEEEC T ss_pred EEEEEECCCCCEEEEEEEC T ss_conf 4898978997389999975 No 147 >3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea} Probab=95.00 E-value=0.035 Score=30.61 Aligned_cols=65 Identities=15% Similarity=0.185 Sum_probs=43.9 Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEE-------------E----------------------------ECCC---CCC Q ss_conf 9999568985788877764699998778-------------8----------------------------7278---611 Q T0582 45 SIVRYAPGSRFSAHTHDGGEEFIVLDGV-------------F----------------------------QDEH---GDY 80 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee~~VL~G~-------------~----------------------------~d~~---~~~ 80 (222) .-..+.|.+.+-++..+....+||+.|. | .|.+ ..+ T Consensus 51 ~R~tiep~gL~LP~y~nap~l~YV~qG~G~~G~v~PGcpetf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~~ 130 (510) T 3c3v_A 51 SRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSHQKVHRF 130 (510) T ss_dssp EEEEECTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC--------------------CEEEEESCCEEE T ss_pred EEEEECCCCEECCCCCCCCEEEEEEECEEEEEEECCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEC T ss_conf 68777578351664258972799994848999983798003215123124322234321222222223444220147850 Q ss_pred CCCCEEECCCCCCCCEECCC-CEEEEEEEE Q ss_conf 68616885889822326488-808999900 Q T0582 81 PAGTYVRNPPTTSHVPGSAE-GCTIFVKLW 109 (222) Q Consensus 81 ~~G~y~~~p~gs~H~p~s~~-Gc~~~vkl~ 109 (222) ..||-+..|+|+.|=-+.+. --++.|+|. T Consensus 131 r~GDViaiPaG~~~w~yNdg~~~Lv~v~l~ 160 (510) T 3c3v_A 131 NEGDLIAVPTGVAFWLYNDHDTDVVAVSLT 160 (510) T ss_dssp CTTEEEEECTTCEEEEEECSSSCEEEEEEE T ss_pred CCCCEEEECCCCEEEEEECCCCCEEEEEEE T ss_conf 569889977883599997899757999985 No 148 >3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A Probab=94.84 E-value=0.076 Score=28.60 Aligned_cols=101 Identities=12% Similarity=-0.022 Sum_probs=61.6 Q ss_pred ECCCCCCEECCCCCEEEEEEECCCCCEE--EEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECC----C----CCCCCC Q ss_conf 0564663315889557999502688705--79999995689857888777646999987788727----8----611686 Q T0582 14 DTDQLEWRPSPMKGVERRMLDRIGGEVA--RATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQDE----H----GDYPAG 83 (222) Q Consensus 14 ~~~~~~W~~~p~~Gv~~~~L~~~~~e~g--~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d~----~----~~~~~G 83 (222) ..++..|............+.-...... -....++...+.....|.|.+.|.+||++|.+.-. . -...+| T Consensus 304 ra~~r~~i~~~~~~~~Y~~~sLa~~~~~p~m~~l~l~~~~~~~~e~~~h~GeE~~~VL~G~VeL~ie~~~G~e~~~L~pG 383 (443) T 3g7d_A 304 WTTIEDSRRSRRTFGTYEAASMASAAHLPDLVGSFLRVDADGRGADLIDHAENHYVVTEGRLTLEWDGPDGPASVELEPD 383 (443) T ss_dssp CBCHHHHHHTCEEETTEEEEECCCCTTCTTCEEEEEEEC------CBCCSSEEEEEEEESCEEEEEEETTEEEEEEECTT T ss_pred ECCCCCEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEECCC T ss_conf 24521111047875306886356765787327899977888887744479718999998799999984788369997699 Q ss_pred CEEECCCCCCCCEECCCCEEEEEEEECCCCCC Q ss_conf 16885889822326488808999900279566 Q T0582 84 TYVRNPPTTSHVPGSAEGCTIFVKLWQFDPAD 115 (222) Q Consensus 84 ~y~~~p~gs~H~p~s~~Gc~~~vkl~q~~~~d 115 (222) |=++..+...|.-. ..|.++-.+.+|--.+| T Consensus 384 DSlYfds~vpH~f~-n~Gtvlkl~~G~~i~~~ 414 (443) T 3g7d_A 384 GSAWTGPFVRHRWH-GTGTVLKFGSGAHLGYQ 414 (443) T ss_dssp CEEEECTTCCEEEE-SSEEEEEEEECSTTCHH T ss_pred CEEEECCCCCCCCC-CCCEEEEEECCCCCCCC T ss_conf 77998799971337-58728998448855774 No 149 >2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A Probab=94.83 E-value=0.033 Score=30.74 Aligned_cols=70 Identities=13% Similarity=0.122 Sum_probs=48.5 Q ss_pred EEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE---------------------------CCC---CCCCCCCEEECCC Q ss_conf 5799999956898578887776469999877887---------------------------278---6116861688588 Q T0582 41 ARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ---------------------------DEH---GDYPAGTYVRNPP 90 (222) Q Consensus 41 g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~---------------------------d~~---~~~~~G~y~~~p~ 90 (222) |.+..-..+.|.+-+-+|..+....+||++|.=. |++ ..+..||-+..|+ T Consensus 62 Gv~~~R~tieP~~L~LP~y~nA~~l~yV~qG~G~~g~v~Pgc~et~~~~~~~~~~~~~~~~d~~qk~~~lr~GDViaiPa 141 (459) T 2e9q_A 62 GVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVPA 141 (459) T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEECT T ss_pred CEEEEEEEECCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCHHHHHCCHHCCCCCCCCCCCCCEEEEEECCCCEEEECC T ss_conf 60347998647833166214898389998277999997689813431200013333445554513688734588899779 Q ss_pred CCCCCEEC-CCCEEEEEEEEC Q ss_conf 98223264-888089999002 Q T0582 91 TTSHVPGS-AEGCTIFVKLWQ 110 (222) Q Consensus 91 gs~H~p~s-~~Gc~~~vkl~q 110 (222) |+.|=-+. .+.-++.|++-. T Consensus 142 G~~~w~~N~g~~~lv~v~l~d 162 (459) T 2e9q_A 142 GVSHWMYNRGQSDLVLIVFAD 162 (459) T ss_dssp TCCEEEEECSSSCEEEEEEEE T ss_pred CCEEEEEECCCCCEEEEEEEC T ss_conf 864899978998689999971 No 150 >3bcw_A Uncharacterized protein; NP_887725.1, domain of unknown function with A RMLC-like cupin fold; 1.60A {Bordetella bronchiseptica RB50} Probab=94.81 E-value=0.13 Score=27.29 Aligned_cols=58 Identities=19% Similarity=0.174 Sum_probs=42.4 Q ss_pred EEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE--CCCC---CCCCCCEEECCCCCCCCEECCCC Q ss_conf 99999956898578887776469999877887--2786---11686168858898223264888 Q T0582 43 ATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--DEHG---DYPAGTYVRNPPTTSHVPGSAEG 101 (222) Q Consensus 43 ~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~--d~~~---~~~~G~y~~~p~gs~H~p~s~~G 101 (222) .+-+=+..||. +..+.++..|-++||||.+. +++| .+.||+.++.|+|++=+-.+.+- T Consensus 50 ~~GvW~~tpG~-~~~~~~~~dE~~~iLEG~v~it~~dG~~~~~~aGD~~~ip~G~~g~W~v~e~ 112 (123) T 3bcw_A 50 ESGVWESTSGS-FQSNTTGYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMPEGYTGRWEVDRH 112 (123) T ss_dssp EEEEEEEEEEE-EECCCTTEEEEEEEEEEEEEEECTTCCEEEEETTCEEEECTTCCCEEEEEEE T ss_pred EEEEEECCCCE-EEEECCCCCEEEEEEEEEEEEECCCCCEEEECCCCEEEECCCCEEEEEECCC T ss_conf 99999746958-3765488645999997189999199989998599899999999899997842 No 151 >2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A Probab=94.78 E-value=0.093 Score=28.09 Aligned_cols=51 Identities=14% Similarity=0.112 Sum_probs=38.3 Q ss_pred EECCCCCCC-----CCCCCCCEEEEEEEEEE--ECCCC--CCCCCCEEECCCCCCCCEEC Q ss_conf 956898578-----88777646999987788--72786--11686168858898223264 Q T0582 48 RYAPGSRFS-----AHTHDGGEEFIVLDGVF--QDEHG--DYPAGTYVRNPPTTSHVPGS 98 (222) Q Consensus 48 r~~pG~~~p-----~H~H~~~ee~~VL~G~~--~d~~~--~~~~G~y~~~p~gs~H~p~s 98 (222) -+..|...+ +|.|+..+-+||++|.- ..++. .+.+|+.++.+||..|.-.+ T Consensus 19 ~~~~~~~~~~~~~Rp~g~~~Y~l~~v~~G~g~~~i~~~~~~l~~Gdl~li~Pg~~H~~~~ 78 (164) T 2arc_A 19 PIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGR 78 (164) T ss_dssp EEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEEE T ss_pred ECCCCCCCCEEEECCCCCCCEEEEEEEEEEEEEEECCEEEEECCCEEEEECCCCEEEEEE T ss_conf 866898452347078888998999999716999999999996799299991997289885 No 152 >1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12 Probab=94.51 E-value=0.018 Score=32.31 Aligned_cols=24 Identities=4% Similarity=0.119 Sum_probs=15.3 Q ss_pred CEEEEECCCCCCEECCCCCEEEEEE Q ss_conf 4167705646633158895579995 Q T0582 9 KPVVIDTDQLEWRPSPMKGVERRML 33 (222) Q Consensus 9 ~~~~v~~~~~~W~~~p~~Gv~~~~L 33 (222) .+.++.+.++.|+-. ..||.-.=. T Consensus 81 ~~~~i~~G~vQ~MtA-G~GI~HsE~ 104 (242) T 1tq5_A 81 NKEQVPAGEFQIMSA-GTGIRHSEY 104 (242) T ss_dssp CEEEEETTCEEEEEC-TTCEEEEEE T ss_pred CCEEECCCCEEEEEC-CCCEEEEEE T ss_conf 716777993899965-785799761 No 153 >2opk_A Hypothetical protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.10A {Ralstonia eutropha JMP134} Probab=94.50 E-value=0.19 Score=26.23 Aligned_cols=74 Identities=14% Similarity=0.059 Sum_probs=43.5 Q ss_pred EEEEEEECCCCCEEEEEEEEEECCCCCCCC--CCCCCCEEEEEEEEEE--ECCC----CCCCCCCEEECCCCCCCCEE-- Q ss_conf 579995026887057999999568985788--8777646999987788--7278----61168616885889822326-- Q T0582 28 VERRMLDRIGGEVARATSIVRYAPGSRFSA--HTHDGGEEFIVLDGVF--QDEH----GDYPAGTYVRNPPTTSHVPG-- 97 (222) Q Consensus 28 v~~~~L~~~~~e~g~~t~lvr~~pG~~~p~--H~H~~~ee~~VL~G~~--~d~~----~~~~~G~y~~~p~gs~H~p~-- 97 (222) =++..|...+ .-+.-.||- .|+.+.+- |.|...|.++||+|.- ..++ -.+.+|++++-|+|..|... T Consensus 20 E~fe~L~~~~--~~kieRIvs-~~~~s~~~~w~~q~~eEWviVl~G~a~v~~~~~~~~~~L~~Gd~i~IP~~~~HRv~nT 96 (112) T 2opk_A 20 EIFQPLLERK--GLKIERIIS-NGQASPPGFWYDSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAWT 96 (112) T ss_dssp CEEEEEEEET--TEEEEEEEE-SSCCCCTTCCBCCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEEE T ss_pred EEEEEEECCC--CEEEEEEEE-CCCCCCCCCCEECCCCEEEEEEECEEEEEECCCCEEEEECCCCEEEECCCCCEEEEEC T ss_conf 1899986299--999999999-9988898625817984799998478999987786799946999999879894986767 Q ss_pred CCCCEEE Q ss_conf 4888089 Q T0582 98 SAEGCTI 104 (222) Q Consensus 98 s~~Gc~~ 104 (222) |++.+++ T Consensus 97 s~~~~ti 103 (112) T 2opk_A 97 DGGEPTV 103 (112) T ss_dssp CSSSCEE T ss_pred CCCCCEE T ss_conf 9999889 No 154 >1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 Probab=94.09 E-value=0.17 Score=26.53 Aligned_cols=21 Identities=14% Similarity=0.427 Sum_probs=11.0 Q ss_pred CEEEEECCCCCCEECCCCCEEE Q ss_conf 4167705646633158895579 Q T0582 9 KPVVIDTDQLEWRPSPMKGVER 30 (222) Q Consensus 9 ~~~~v~~~~~~W~~~p~~Gv~~ 30 (222) ...++.+.++.|+- ...||.- T Consensus 81 ~~~~i~~G~vq~mt-AG~GI~H 101 (290) T 1j1l_A 81 HTGKMNPGDLQWMT-AGRGILH 101 (290) T ss_dssp CEEEECTTCEEEEE-CTTCEEE T ss_pred CCEEECCCCEEEEE-CCCCEEE T ss_conf 85358899669983-7898078 No 155 >1o5u_A Novel thermotoga maritima enzyme TM1112; structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A Probab=93.57 E-value=0.055 Score=29.45 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=18.9 Q ss_pred EEE-EEEEEEEE--ECCC---EECCCEEEECCCCCCEEEEE Q ss_conf 799-99877898--2893---21686179818998022488 Q T0582 166 IEV-LVLDGDVT--VNDE---VLGRNAWLRLPEGEALSATA 200 (222) Q Consensus 166 eEi-~VLeG~l~--d~~~---~~~~Gs~i~~P~g~~H~~~a 200 (222) .|+ +||+|++. ++++ .+.+||.+..|+|..-+... T Consensus 50 dE~~~IleG~v~it~~~G~~~~~~aGD~~~~PkG~~g~W~v 90 (101) T 1o5u_A 50 NETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKV 90 (101) T ss_dssp CEEEEEEEEEEEEEETTCCEEEEETTCEEEECTTCEEEEEE T ss_pred CEEEEEEEEEEEEEECCCCEEEEECCCEEEECCCCEEEEEE T ss_conf 48999998599999199978999699899999999999997 No 156 >3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus} Probab=93.13 E-value=0.12 Score=27.53 Aligned_cols=64 Identities=11% Similarity=0.041 Sum_probs=44.1 Q ss_pred EEECCCCCCCCCCCCCCEEEEEEEEEEE-------------C-------------------------------------- Q ss_conf 9956898578887776469999877887-------------2-------------------------------------- Q T0582 47 VRYAPGSRFSAHTHDGGEEFIVLDGVFQ-------------D-------------------------------------- 75 (222) Q Consensus 47 vr~~pG~~~p~H~H~~~ee~~VL~G~~~-------------d-------------------------------------- 75 (222) +.+.|.+-+-+|..+....+||+.|.=. + T Consensus 48 ~ti~p~gl~lP~y~nap~l~yV~qG~G~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (466) T 3kgl_A 48 YIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQGQQGQQ 127 (466) T ss_dssp EEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC------------------------------ T ss_pred EEECCCCEECCCCCCCCCEEEEEECEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 87767856067426898259999474889877789902441600024544444332322122233333333322222222 Q ss_pred --------------CC---CCCCCCCEEECCCCCCCCEECCC-CEEEEEEEEC Q ss_conf --------------78---61168616885889822326488-8089999002 Q T0582 76 --------------EH---GDYPAGTYVRNPPTTSHVPGSAE-GCTIFVKLWQ 110 (222) Q Consensus 76 --------------~~---~~~~~G~y~~~p~gs~H~p~s~~-Gc~~~vkl~q 110 (222) .+ ..+..||-+..|+|+.|=-+.+. --+++|++-. T Consensus 128 ~~~~~~~~~~~~~d~hqkv~~lr~GDVi~iPAG~~~w~~Ndgd~~Lv~v~~~d 180 (466) T 3kgl_A 128 GQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLD 180 (466) T ss_dssp -----------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEE T ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEEEECCCCCCEEEEEEEE T ss_conf 22111112344443323034304689789899875888728998579999985 No 157 >1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20 Probab=92.98 E-value=0.37 Score=24.60 Aligned_cols=88 Identities=22% Similarity=0.180 Sum_probs=65.3 Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE----CC-C--C---C--CCCCCEEECCC Q ss_conf 5889557999502688705799999956898578887776469999877887----27-8--6---1--16861688588 Q T0582 23 SPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ----DE-H--G---D--YPAGTYVRNPP 90 (222) Q Consensus 23 ~p~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~----d~-~--~---~--~~~G~y~~~p~ 90 (222) ...|=|--|.|+. ++ ++.++=-.|+.+...|.-++.|.+|-|+|.+. ++ . + + ...|+-+..|+ T Consensus 20 lLkPPV~Nk~l~~-~d----~iVmvVGGPN~R~DyH~~~~eE~FYQlkGdm~Lkv~~~~~~~gk~~di~I~EGe~flLP~ 94 (176) T 1zvf_A 20 LLKPPVNNYCLHK-GG----FTVMIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPG 94 (176) T ss_dssp GGSSSSCEEEEEC-SS----EEEEEECSSBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECT T ss_pred HHCCCCCCEEEEC-CC----CEEEEEECCCCCCCCCCCCCHHEEEEECCCEEEEEECCCCCCCEEEEEEECCCCEEECCC T ss_conf 6189977767761-88----389999488666764558551312453275899998067788704777746886797289 Q ss_pred CCCCCEECCCCEEEEEEEECCCCCC Q ss_conf 9822326488808999900279566 Q T0582 91 TTSHVPGSAEGCTIFVKLWQFDPAD 115 (222) Q Consensus 91 gs~H~p~s~~Gc~~~vkl~q~~~~d 115 (222) +..|+|.-..+..-+|--+.=.+++ T Consensus 95 ~vPHSPqR~~~siGLVIEr~R~~g~ 119 (176) T 1zvf_A 95 NVPHSPVRFADTVGIVVEQDRPGGE 119 (176) T ss_dssp TCCEEEEECTTCEEEEEEECCCSSS T ss_pred CCCCCCCCCCCCEEEEEEEECCCCC T ss_conf 8987874799963489997428998 No 158 >1zx5_A Mannosephosphate isomerase, putative; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3 Probab=92.78 E-value=0.081 Score=28.45 Aligned_cols=113 Identities=13% Similarity=0.112 Sum_probs=58.1 Q ss_pred CCCCCEEECCCCCCCCEECCCCEEEEEEEECCCCCCCCEEEE---CCCHHCC--C-----CCCCEEEEEEECCCCCEEEE Q ss_conf 168616885889822326488808999900279566560780---7613506--6-----66862789872089848999 Q T0582 80 YPAGTYVRNPPTTSHVPGSAEGCTIFVKLWQFDPADRTQFSK---NMEAELG--A-----PVEGISTSLLHEDERETVTH 149 (222) Q Consensus 80 ~~~G~y~~~p~gs~H~p~s~~Gc~~~vkl~q~~~~d~~~v~i---dt~~~~~--~-----~~~Gv~~~~L~~~~~e~v~L 149 (222) ..+|++++.|+|+.|+ . .|++++ -+.| +.|-+ .+. |...... . ....-....+.+.+.-.+.. T Consensus 162 v~~Gd~~~IpaGtvHA-g--~g~lil-Eiq~--~SD~t-yR~~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~~F~~~~ 234 (300) T 1zx5_A 162 TTPYDTFVIRPGIPHA-G--EGLRVL-EVSS--NSTLA-YFFNENDWEKVKKVLNTKKVEEFEVKGKKGMAETENFGLEV 234 (300) T ss_dssp CCTTCEEEECTTCCEE-E--ESEEEE-EEEE--SCCCC-EESSTTTHHHHHHHCCCSBCCGGGTBCBTTEEECSSEEEEE T ss_pred CCCCCEEEECCCCCEE-C--CCCEEE-EEEC--CCCCE-EECCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCEEEEE T ss_conf 4118889937998467-6--786489-9873--78957-62100583634123765454645457752058998468899 Q ss_pred EEECCCCCCCCCCCCCEEE-EEEEEEEEECC---CEECCCEEEECCCCCCEEEEEC Q ss_conf 9968897447769886799-99877898289---3216861798189980224888 Q T0582 150 RKLEPGANLTSEAAGGIEV-LVLDGDVTVND---EVLGRNAWLRLPEGEALSATAG 201 (222) Q Consensus 150 ~r~~pG~~~p~h~h~GeEi-~VLeG~l~d~~---~~~~~Gs~i~~P~g~~H~~~a~ 201 (222) +++.....+. .-++.++ +|++|++...+ -.+.+|+-+.+|+....-...+ T Consensus 235 ~~~~~~~~~~--~~~~~~il~~~~G~~~i~~~~~~~L~~Ges~~IPa~~~~~~i~g 288 (300) T 1zx5_A 235 VDVTGTAEIK--TGGVMNILYAAEGYFILRGKETADLHRGYSCLVPASTDSFTVES 288 (300) T ss_dssp EEEEEEEEEE--CCSBCEEEEEEESCEEEESSSEEEECTTCEEEECTTCCEEEEEE T ss_pred EEECCCEEEC--CCCCEEEEEEECCEEEEECCCEEEECCCCEEEEECCCCCEEEEE T ss_conf 9945878863--69963999996755999679889980687999975886199991 No 159 >1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A Probab=91.82 E-value=0.52 Score=23.73 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=63.8 Q ss_pred CCCCCCEEEEECCCCCCEECCCCCE-----E----EEEEECCCC---CEEEEEEEEEECCCCCCCC---CCCCCCEEEEE Q ss_conf 5677841677056466331588955-----7----999502688---7057999999568985788---87776469999 Q T0582 4 NADFTKPVVIDTDQLEWRPSPMKGV-----E----RRMLDRIGG---EVARATSIVRYAPGSRFSA---HTHDGGEEFIV 68 (222) Q Consensus 4 ~~d~~~~~~v~~~~~~W~~~p~~Gv-----~----~~~L~~~~~---e~g~~t~lvr~~pG~~~p~---H~H~~~ee~~V 68 (222) ..++++ +...+..+.|-|.+.|.. + .+.+-..++ ..|- .+--|..+.+... -..+|.|.++| T Consensus 108 ~~~~~~-~~~~P~qlrw~P~~~p~~~~~~~Dfv~Gl~t~~g~Gd~~~~~G~--aih~Y~an~SM~~~~f~NaDGD~Li~~ 184 (471) T 1eyb_A 108 THNWDE-VDPDPNQLRWKPFEIPKASQKKVDFVSGLHTLCGAGDIKSNNGL--AIHIFLCNTSMENRCFYNSDGDFLIVP 184 (471) T ss_dssp CCCGGG-SCCCCSCEEECSCCCCCTTTCCCCTTTTEEEEEEESCGGGTCCE--EEEEEEECSCCCSEEEEESSEEEEEEE T ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHCCCCCCCCCCE--EEEEEEECCCCCCCEEECCCCCEEEEE T ss_conf 687002-69995333417988887667765422121002236884324653--899997057887410453778889998 Q ss_pred EEEEEE--CCCCC--CCCCCEEECCCCCCCCEECCCCEEEEEE Q ss_conf 877887--27861--1686168858898223264888089999 Q T0582 69 LDGVFQ--DEHGD--YPAGTYVRNPPTTSHVPGSAEGCTIFVK 107 (222) Q Consensus 69 L~G~~~--d~~~~--~~~G~y~~~p~gs~H~p~s~~Gc~~~vk 107 (222) -+|.+. .+.|. +.+|+|+..|.|.+....-.+.+.+++- T Consensus 185 q~G~l~l~TefG~L~v~pGd~vVIPRG~~frv~~~~p~rgyi~ 227 (471) T 1eyb_A 185 QKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYIL 227 (471) T ss_dssp EESCEEEEETTEEEEECTTEEEEECTTCCEEEECSSSEEEEEE T ss_pred EECCEEEEEECCCEEECCCCEEEECCCCEEEECCCCCCEEEEE T ss_conf 8576899984511672589789977854798556887349999 No 160 >3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A Probab=91.81 E-value=0.34 Score=24.78 Aligned_cols=50 Identities=18% Similarity=0.210 Sum_probs=36.7 Q ss_pred CCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCC-CEEEEEEEEEEECC Q ss_conf 89557999502688705799999956898578887776-46999987788727 Q T0582 25 MKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVFQDE 76 (222) Q Consensus 25 ~~Gv~~~~L~~~~~e~g~~t~lvr~~pG~~~p~H~H~~-~ee~~VL~G~~~d~ 76 (222) ..+..|.++++.+ +.- ...++.+.||...|.|.|++ .--+.||+|.+... T Consensus 55 ~~~Y~Rnli~~~~-~~f-el~li~W~pgq~tpiHdH~~~~c~~~vl~G~l~e~ 105 (200) T 3eln_A 55 QYRYTRNLVDQGN-GKF-NLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKET 105 (200) T ss_dssp SSSCEEEEEECGG-GTC-EEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEE T ss_pred CCCEEEEEEECCC-CCE-EEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEE T ss_conf 7743899986489-986-89999826998486865799658999546847999 No 161 >1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3 Probab=88.11 E-value=1.1 Score=21.91 Aligned_cols=124 Identities=15% Similarity=0.243 Sum_probs=65.2 Q ss_pred CCCCCEEECCCCCCCCEECCCCEEEE---------EEEECCCCC--CCCEEEECCCH---------HCC------CCCCC Q ss_conf 16861688588982232648880899---------990027956--65607807613---------506------66686 Q T0582 80 YPAGTYVRNPPTTSHVPGSAEGCTIF---------VKLWQFDPA--DRTQFSKNMEA---------ELG------APVEG 133 (222) Q Consensus 80 ~~~G~y~~~p~gs~H~p~s~~Gc~~~---------vkl~q~~~~--d~~~v~idt~~---------~~~------~~~~G 133 (222) ..+|+.++.|+|+.|+--+ |++++ +++.-+.-. +-++-.++... ... ....+ T Consensus 162 l~~Gd~i~ipaGtvHA~~~--G~l~~Eiq~~SD~t~R~yd~~R~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (319) T 1qwr_A 162 IKPGDFYYVPSGTLHALCK--GALVLETQQNSDATYRVYDYDRLDSNGSPRELHFAKAVNAATVPHVDGYIDESTESRKG 239 (319) T ss_dssp CCTTCEEEECTTCCEEECS--SEEEEEEEESCCCCEEEECTTCBCTTSCBCCCCHHHHHHHSCSSCCCCCCCCEEEEETT T ss_pred CCCCCEEEECCCCEEEECC--CCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC T ss_conf 6789989947998007368--98799997377857876303554688876443889885210355678653454212588 Q ss_pred EEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CC--CEECCCEEEECCCCCCEEEEECCCCCEEE Q ss_conf 27898720898489999968897447769886799-998778982--89--32168617981899802248889882999 Q T0582 134 ISTSLLHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--ND--EVLGRNAWLRLPEGEALSATAGARGAKIW 208 (222) Q Consensus 134 v~~~~L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~--~~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~ 208 (222) .....+...+.-.+..+++.....+. ...+..+ +|++|+.+. ++ -.+.+|+-+.+|++...--..+ .|+++ T Consensus 240 ~~~~~~~~~~~F~~~~~~~~~~~~~~--~~~~~~il~vi~G~~~i~~~~~~~~l~~G~~~~ipA~~~~~~i~G--~~~~l 315 (319) T 1qwr_A 240 ITIKTFVQGEYFSVYKWDINGEAEMA--QDESFLICSVIEGSGLLKYEDKTCPLKKGDHFILPAQMPDFTIKG--TCTLI 315 (319) T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEEC--CCSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCCEEEEE--EEEEE T ss_pred CEEEECCCCCCEEEEEEEECCCEEEC--CCCCCEEEEEECCEEEEEECCEEEEEECCCEEEEECCCCCEEEEE--EEEEE T ss_conf 55996589985899999927937862--589849999981769999799689993564999955886499996--78999 Q ss_pred E Q ss_conf 9 Q T0582 209 M 209 (222) Q Consensus 209 v 209 (222) + T Consensus 316 ~ 316 (319) T 1qwr_A 316 V 316 (319) T ss_dssp E T ss_pred E T ss_conf 9 No 162 >1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices, merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X Probab=87.33 E-value=0.3 Score=25.10 Aligned_cols=31 Identities=10% Similarity=0.152 Sum_probs=14.2 Q ss_pred CEEEEEEECCCCCCCCCCC-CCEEE-EEEEEEE Q ss_conf 4899999688974477698-86799-9987789 Q T0582 145 ETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDV 175 (222) Q Consensus 145 e~v~L~r~~pG~~~p~h~h-~GeEi-~VLeG~l 175 (222) -.+.++++.||+-.+.|.| ...|+ ||++|+. T Consensus 36 is~~~~~l~~gam~~PHwh~~A~ei~yv~~G~~ 68 (79) T 1dgw_X 36 ILLNCLQMNEGALFVPHYNSRATVILVANEGRA 68 (79) T ss_dssp EEEEEEEECTTCEEEEEEESSCEEEEEEEESCE T ss_pred EEEEEEEECCCCEECCCCCCCCCEEEEEEECEE T ss_conf 278998864896706633799869999993708 No 163 >1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3 Probab=86.24 E-value=1.4 Score=21.28 Aligned_cols=124 Identities=13% Similarity=0.138 Sum_probs=64.8 Q ss_pred CCCCCEEECCCCCCCCEECCCCEEEEEEEECCCCCCCC--------EE---------EECCCHHC--CC---CC-----C Q ss_conf 16861688588982232648880899990027956656--------07---------80761350--66---66-----8 Q T0582 80 YPAGTYVRNPPTTSHVPGSAEGCTIFVKLWQFDPADRT--------QF---------SKNMEAEL--GA---PV-----E 132 (222) Q Consensus 80 ~~~G~y~~~p~gs~H~p~s~~Gc~~~vkl~q~~~~d~~--------~v---------~idt~~~~--~~---~~-----~ 132 (222) ..+|+.++.|+|..|+--+ |+. |-++|- .|-. ++ ..+..... .. .. . T Consensus 270 l~pGdaifvpaG~~HAy~~--G~~--vEim~~--SDnv~R~glt~k~~dv~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 343 (440) T 1pmi_A 270 LNKGEAMFLQAKDPHAYIS--GDI--IECMAA--SDNVVRAGFTPKFKDVKNLVEMLTYSYESVEKQKMPLQEFPRSKGD 343 (440) T ss_dssp ECTTCEEEECTTCCEEEEE--EEE--EEEEES--CCCCEEEESCSSCCCHHHHHHHCCCCCCCGGGGBCCCBCCTTEEES T ss_pred CCCCCEEECCCCCCCEECC--CCE--EEEEEC--CCCEEEEECCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCCC T ss_conf 4657568747998548657--867--998736--8968997315776687776553344456720003665444532257 Q ss_pred CEEEEEEEC--CCCCEEEEEEECCCCCCCC--CCCCCEEE-EEEEEEEEEC-------CCEECCCEEEECCCCCCEEEEE Q ss_conf 627898720--8984899999688974477--69886799-9987789828-------9321686179818998022488 Q T0582 133 GISTSLLHE--DERETVTHRKLEPGANLTS--EAAGGIEV-LVLDGDVTVN-------DEVLGRNAWLRLPEGEALSATA 200 (222) Q Consensus 133 Gv~~~~L~~--~~~e~v~L~r~~pG~~~p~--h~h~GeEi-~VLeG~l~d~-------~~~~~~Gs~i~~P~g~~H~~~a 200 (222) ... ..++. .+.-.+.-+++.++..... ....+.+| +|++|+.... ...+.+|+-+.+|++......+ T Consensus 344 ~~~-~~~y~~~~~~F~v~~~~l~~~~~~~~~~~~~~~~~Il~v~~G~~~i~~~~~~~~~~~l~~G~~~~Ipa~~~~~i~~ 422 (440) T 1pmi_A 344 AVK-SVLYDPPIAEFSVLQTIFDKSKGGKQVIEGLNGPSIVIATNGKGTIQITGDDSTKQKIDTGYVFFVAPGSSIELTA 422 (440) T ss_dssp CSE-EEEECCSSSSCEEEEEECCTTTCCEEEECCCSSCEEEEEEESEEEEEETTCGGGCEEEETTCEEEECTTCCEEEEE T ss_pred CCC-EEEECCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCEEEEEECCCCCCEEEECCCEEEEECCCCEEEEEE T ss_conf 773-4980799986899999988887631444379974899998078999965888767997650699986996499984 Q ss_pred CC----CCCEEEEE Q ss_conf 89----88299998 Q T0582 201 GA----RGAKIWMK 210 (222) Q Consensus 201 ~~----~Gc~i~vK 210 (222) .. .+.++|+- T Consensus 423 ~~~~~~~~~~~~rA 436 (440) T 1pmi_A 423 DSANQDQDFTTYRA 436 (440) T ss_dssp CSSCCSSCCEEEEE T ss_pred CCCCCCCCEEEEEE T ss_conf 45677775799999 No 164 >1dzr_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, 3, 5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A* Probab=81.44 E-value=2.2 Score=20.07 Aligned_cols=103 Identities=14% Similarity=-0.002 Sum_probs=60.9 Q ss_pred EECCCCCEEEEEEECCCCCEEEEEEEE---------------------EECCCCCCCCCCCC----CCEEEEEEEEEEEC Q ss_conf 315889557999502688705799999---------------------95689857888777----64699998778872 Q T0582 21 RPSPMKGVERRMLDRIGGEVARATSIV---------------------RYAPGSRFSAHTHD----GGEEFIVLDGVFQD 75 (222) Q Consensus 21 ~~~p~~Gv~~~~L~~~~~e~g~~t~lv---------------------r~~pG~~~p~H~H~----~~ee~~VL~G~~~d 75 (222) .+++.+||....+....+++|.++.+. ...+|..=-.|.|. ..--+.|+.|.+.| T Consensus 5 ~~t~I~Gv~vi~p~~~~D~RG~f~e~f~~~~f~~~~~~~~~~~q~n~s~s~~gvlRGlH~q~~p~~q~Klv~~~~G~i~d 84 (183) T 1dzr_A 5 IKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFD 84 (183) T ss_dssp EECSSTTCEEEECCEEEETTEEEEEEEEHHHHHHHHSSCCCCCEEEEEEEETTBEEEEEEECGGGCCCEEEEEEESEEEE T ss_pred EECCCCCEEEEECCEECCCCCCEEEEECHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEECEEEE T ss_conf 85558986999697273398588776158999870099998778888875798189999856999822799997553999 Q ss_pred CCCCCC-----------------CCCEEECCCCCCCCEEC-CCCEEEEEEEEC-CCCCCCCEEEECC Q ss_conf 786116-----------------86168858898223264-888089999002-7956656078076 Q T0582 76 EHGDYP-----------------AGTYVRNPPTTSHVPGS-AEGCTIFVKLWQ-FDPADRTQFSKNM 123 (222) Q Consensus 76 ~~~~~~-----------------~G~y~~~p~gs~H~p~s-~~Gc~~~vkl~q-~~~~d~~~v~idt 123 (222) --.|.. .+..++-|+|..|+-.+ .+.+.++++.-+ |+++++..++-|. T Consensus 85 v~vDlR~~SpT~g~~~~~~L~~~~~~~l~IP~G~aHGf~~L~d~~~~~Y~~~~~y~p~~e~~i~~~D 151 (183) T 1dzr_A 85 VAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKATNYYSPSSEGSILWND 151 (183) T ss_dssp EEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESSCCCTTTEEECCTTC T ss_pred EEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC T ss_conf 9982889949998589999778788779958862688998379739999579872854423706999 No 165 >1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A* Probab=77.40 E-value=2.9 Score=19.31 Aligned_cols=106 Identities=14% Similarity=0.099 Sum_probs=64.2 Q ss_pred CCCCEECCCCCEEEEEEECCCCCEEEEEEE--------------------EEECCCCCCCCCCC---CCCEEEEEEEEEE Q ss_conf 466331588955799950268870579999--------------------99568985788877---7646999987788 Q T0582 17 QLEWRPSPMKGVERRMLDRIGGEVARATSI--------------------VRYAPGSRFSAHTH---DGGEEFIVLDGVF 73 (222) Q Consensus 17 ~~~W~~~p~~Gv~~~~L~~~~~e~g~~t~l--------------------vr~~pG~~~p~H~H---~~~ee~~VL~G~~ 73 (222) .+.-.+++.+||....+....+++|.++-+ ..-.+|+.--.|.| +...-+.|+.|.+ T Consensus 3 ~m~~~~t~I~Gv~ii~~~~~~D~RG~f~e~~~~~~~~~~g~~~~~~Q~n~S~s~~gvlRGlH~q~~~~q~Klv~ci~G~i 82 (185) T 1ep0_A 3 EFRFIKTSLDGAIIIEPEVYTDERGYFMETFNEAIFQENGLEVRFVQDNESMSVRGVLRGLHFQREKPQGKLVRVIRGEI 82 (185) T ss_dssp CEEEEECSSTTCEEEEECEEEETTEEEECCCCHHHHHHTTCCCCCCEEEEEEEETTBEEEEEEESSSCCCEEEEEEESEE T ss_pred CCEEEECCCCCEEEEECCEECCCCCCEEEECCHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCEE T ss_conf 75678668998599879566329968865315588997199998138988724788889998528998636999830539 Q ss_pred ECCCCC-------C----------CCCCEEECCCCCCCCEEC-CCCEEEEEEEE-CCCCCCCCEEEEC Q ss_conf 727861-------1----------686168858898223264-88808999900-2795665607807 Q T0582 74 QDEHGD-------Y----------PAGTYVRNPPTTSHVPGS-AEGCTIFVKLW-QFDPADRTQFSKN 122 (222) Q Consensus 74 ~d~~~~-------~----------~~G~y~~~p~gs~H~p~s-~~Gc~~~vkl~-q~~~~d~~~v~id 122 (222) .|--.| | ..+..++-|+|..|+-.+ .+.+.++.+.- .|+++++.-++-| T Consensus 83 ~dv~VD~R~~SpTfG~~~~~~Ls~~n~~~l~IP~G~aHGf~~L~d~~~~~Y~~~~~y~p~~e~~i~~~ 150 (185) T 1ep0_A 83 FDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCTELYHPEYDSGIPWD 150 (185) T ss_dssp EEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESSCCCGGGEEECCTT T ss_pred EEEEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC T ss_conf 99999999995998858999977878878995897447899827862999956986084322166898 No 166 >2wfp_A Mannose-6-phosphate isomerase; zinc, cytoplasm, APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A* Probab=67.14 E-value=5.2 Score=17.88 Aligned_cols=109 Identities=9% Similarity=0.063 Sum_probs=58.3 Q ss_pred CCCCCEEECCCCCCCCEECCCCEEEEEEEECCCCCCCC--------E---------EEECCCHHCC-CC---CCCEEEEE Q ss_conf 16861688588982232648880899990027956656--------0---------7807613506-66---68627898 Q T0582 80 YPAGTYVRNPPTTSHVPGSAEGCTIFVKLWQFDPADRT--------Q---------FSKNMEAELG-AP---VEGISTSL 138 (222) Q Consensus 80 ~~~G~y~~~p~gs~H~p~s~~Gc~~~vkl~q~~~~d~~--------~---------v~idt~~~~~-~~---~~Gv~~~~ 138 (222) ..+|+.++.|+|+.|+--+- +. |-++| ..|-. + +..++..... .+ ..+..... T Consensus 244 l~~Gd~~fipaG~~HAy~~G--~~--vEim~--~SDnv~R~g~t~k~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 317 (394) T 2wfp_A 244 LNPGEAMFLFAETPHAYLQG--VA--LEVMA--NSDNVLRAGLTPKYIDIPELVANVKFEPKPAGELLTAPVKSGAELDF 317 (394) T ss_dssp ECTTCEEEECTTCCEEEEEE--EE--EEEEC--SSCBCEECSSCSSCCCHHHHHHTCCCCBCCGGGSSCCCEEETTEEEC T ss_pred CCCCCEEECCCCCCCEECCC--CE--EEEEC--CCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE T ss_conf 27898897179985183368--57--99861--68967854677665678888741356778832024442125888997 Q ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--CCC--EECCCEEEECCCCCCE Q ss_conf 720898489999968897447769886799-998778982--893--2168617981899802 Q T0582 139 LHEDERETVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--NDE--VLGRNAWLRLPEGEAL 196 (222) Q Consensus 139 L~~~~~e~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~~~--~~~~Gs~i~~P~g~~H 196 (222) +-..+.-.+..+++..+.... ...+.+| +|++|+... +++ .+.+|+-+.+|++... T Consensus 318 ~~~~~~F~v~~~~~~~~~~~~--~~~~~~il~v~~G~~~l~~~~~~~~l~~Ges~~ipA~~~~ 378 (394) T 2wfp_A 318 PIPVDDFAFSLHDLALQETSI--GQHSAAILFCVEGEAVLRKDEQRLVLKPGESAFIGADESP 378 (394) T ss_dssp CCSSSSCEEEEEECCSSCEEE--CCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECGGGCC T ss_pred CCCCCCEEEEEEEECCCEEEE--CCCCEEEEEEEEEEEEEEECCEEEEEECCEEEEEECCCEE T ss_conf 899884499999976986881--6998399999940899998999999960179999669630 No 167 >2zkl_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, isomerase; 2.61A {Staphylococcus aureus} Probab=59.26 E-value=7.3 Score=17.02 Aligned_cols=79 Identities=18% Similarity=0.237 Sum_probs=53.5 Q ss_pred CEEEEEEECCCCCEEEEEEECCCCCCCCCCC--CCEEEEEEEEEEEEC-----CC---EE----CCCEEEECCCCCCEEE Q ss_conf 6278987208984899999688974477698--867999987789828-----93---21----6861798189980224 Q T0582 133 GISTSLLHEDERETVTHRKLEPGANLTSEAA--GGIEVLVLDGDVTVN-----DE---VL----GRNAWLRLPEGEALSA 198 (222) Q Consensus 133 Gv~~~~L~~~~~e~v~L~r~~pG~~~p~h~h--~GeEi~VLeG~l~d~-----~~---~~----~~Gs~i~~P~g~~H~~ 198 (222) |.-.-.+..+...++.+....||..--.|.| .-+.++|++|.+... ++ .+ ..-..+..|||..|.. T Consensus 260 g~~~e~~~~~~~~~~~~~~~~pg~~rg~h~H~~~~e~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~ippg~~h~~ 339 (369) T 2zkl_A 260 GSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNI 339 (369) T ss_dssp EEEEEEEECSSSCEEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEE T ss_pred CCEEEEECCCCCCEEEEEEECCCCEECEECCCCCEEEEEEECCEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCEEEE T ss_conf 11345500465652899995798360303057745899998777999999489995899994899718999189856986 Q ss_pred EE-CCCCCEEEEEE Q ss_conf 88-89882999983 Q T0582 199 TA-GARGAKIWMKT 211 (222) Q Consensus 199 ~a-~~~Gc~i~vKT 211 (222) .. +++.|+++.=+ T Consensus 340 ~n~g~~~~~~~~~~ 353 (369) T 2zkl_A 340 ENLGDTDMVTIMWV 353 (369) T ss_dssp EECSSSCEEEEEEE T ss_pred EECCCCCEEEEEEC T ss_conf 98688876999965 No 168 >2qjv_A Uncharacterized IOLB-like protein; 16422983, structural genomics, joint center for structural genomics, JCSG; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2} Probab=53.22 E-value=9.2 Score=16.42 Aligned_cols=162 Identities=8% Similarity=0.018 Sum_probs=81.6 Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEEEEEEC--CCCC----------CC--CCCEEECCCCCCCCEECCCCEEEEEEEEC Q ss_conf 9999568985788877764699998778872--7861----------16--86168858898223264888089999002 Q T0582 45 SIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EHGD----------YP--AGTYVRNPPTTSHVPGSAEGCTIFVKLWQ 110 (222) Q Consensus 45 ~lvr~~pG~~~p~H~H~~~ee~~VL~G~~~d--~~~~----------~~--~G~y~~~p~gs~H~p~s~~Gc~~~vkl~q 110 (222) .++++++|.++....-...--+.+|+|.... ++.. |. +-+.++.|.|+.-...+..+|-+.+---- T Consensus 32 ~v~~L~~Ges~~~~t~~~E~~vV~LsG~~~V~v~g~~f~~lg~R~sVF~~~p~~~vYvp~g~~~~i~a~~~~e~ai~sap 111 (270) T 2qjv_A 32 DVWQLXAGESITLPSDERERCLVLVAGLASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETDLELAVCSAP 111 (270) T ss_dssp EEEEECTTCEEEECCSSEEEEEEEEESCEEEEETTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSSEEEEEEEEE T ss_pred EEEEECCCCEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCEEEEEEEC T ss_conf 99997799989725899689999935789998678400001673366528886199948998099991688659999852 Q ss_pred CCCCCCCEEEECCCHHCCCC-CC---CEEEEEEE-CCC--CCEEEEEEECCC---CCCCCCCCCC---------EEEEE- Q ss_conf 79566560780761350666-68---62789872-089--848999996889---7447769886---------79999- Q T0582 111 FDPADRTQFSKNMEAELGAP-VE---GISTSLLH-EDE--RETVTHRKLEPG---ANLTSEAAGG---------IEVLV- 170 (222) Q Consensus 111 ~~~~d~~~v~idt~~~~~~~-~~---Gv~~~~L~-~~~--~e~v~L~r~~pG---~~~p~h~h~G---------eEi~V- 170 (222) -+ .+.....|...+..... +. -+++..+. .+. .......-+.|+ .++|.|.|.. ||+|- T Consensus 112 a~-~~~p~~~i~~~~v~~~~rG~g~~~R~V~~il~~~~~a~~llv~Ev~tp~G~WSSyPpHkHD~~~~~~E~~lEEiYyy 190 (270) T 2qjv_A 112 GF-GELPVRLISPQEVGVEHRGXGRNQRLVHNILPDSQLADSLLVVEVYTNAGATSSWPAHXHDTAVEGQETYLEETYYH 190 (270) T ss_dssp CC-SCCCCEEECGGGSEEEEESSGGGCEEEEEEECTTSCCSSCEEEEEEECTTCEESCSCEECEEEETTTEEECEEEEEE T ss_pred CC-CCCCCEEECHHHCCEEEECCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE T ss_conf 57-86686897867681587338855089897008998642689999993897637879976777788766630148998 Q ss_pred -EEE------EEEE-C----CCE--ECCCEEEECCCCCCEEEEECCCCCEEEE Q ss_conf -877------8982-8----932--1686179818998022488898829999 Q T0582 171 -LDG------DVTV-N----DEV--LGRNAWLRLPEGEALSATAGARGAKIWM 209 (222) Q Consensus 171 -LeG------~l~d-~----~~~--~~~Gs~i~~P~g~~H~~~a~~~Gc~i~v 209 (222) +.. .+.. . +.+ ..-||.+..|.| -| |.+..-|-.+|. T Consensus 191 ~~~p~~Gfg~q~~y~~~~~~d~~~~v~~gd~v~vp~G-yH-P~~aapGy~~Yy 241 (270) T 2qjv_A 191 RFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXG-YH-PVATIAGYDNYY 241 (270) T ss_dssp EEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSS-BC-CEEECTTCEEEE T ss_pred ECCCCCCEEEEEECCCCCCCCEEEEECCCCEEECCCC-CC-CCCCCCCCCEEE T ss_conf 7169874299872689999860799738999948997-27-877579865099 No 169 >2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A* Probab=52.04 E-value=9.6 Score=16.31 Aligned_cols=60 Identities=10% Similarity=-0.041 Sum_probs=25.6 Q ss_pred ECCCCCCCCCCC-CCEEE-EEEEEEEEE----CCCE-----ECCCEEEECCCCCCEEEEECCCCCEEEEEE Q ss_conf 688974477698-86799-998778982----8932-----168617981899802248889882999983 Q T0582 152 LEPGANLTSEAA-GGIEV-LVLDGDVTV----NDEV-----LGRNAWLRLPEGEALSATAGARGAKIWMKT 211 (222) Q Consensus 152 ~~pG~~~p~h~h-~GeEi-~VLeG~l~d----~~~~-----~~~Gs~i~~P~g~~H~~~a~~~Gc~i~vKT 211 (222) ..+|..--.|.| ...++ +|+.|++.+ .... -.+...++.||+..|...+-.++|.+.+.+ T Consensus 42 ~~~g~iRG~H~Hk~~~q~~~~l~G~i~v~~~d~~~~~~~~l~~~~~~l~IPpg~wh~~~~ls~~sillv~~ 112 (141) T 2pa7_A 42 TKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSDCVMMVLA 112 (141) T ss_dssp CCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCTTCEEEEEE T ss_pred CCCCCEEEEEECCCCEEEEEECCCEEEEEEEECCCCCHHHHCCCCCEEEECCCEEEEEEECCCCCEEEEEC T ss_conf 89996072062401206456158689999982675500000354335882797703133459997999992 No 170 >1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.60A {Bacillus subtilis} SCOP: b.82.2.11 Probab=46.26 E-value=12 Score=15.77 Aligned_cols=27 Identities=22% Similarity=0.187 Sum_probs=21.3 Q ss_pred EECCCEEEECCCCCCEEEEECCCCCEEE Q ss_conf 2168617981899802248889882999 Q T0582 181 VLGRNAWLRLPEGEALSATAGARGAKIW 208 (222) Q Consensus 181 ~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~ 208 (222) ++.+||.++.|+|--|...+ .+.|+-+ T Consensus 221 ~L~pGD~LYiP~gwwH~v~s-~~~s~s~ 247 (342) T 1vrb_A 221 NLTPGTMLYLPRGLWHSTKS-DQATLAL 247 (342) T ss_dssp EECTTCEEEECTTCEEEEEC-SSCEEEE T ss_pred EECCCCEEEECCCCCEEEEE-CCCEEEE T ss_conf 97798789978997278786-5870799 No 171 >1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 3clp_A* 1u12_A 3co2_A Probab=36.80 E-value=17 Score=14.89 Aligned_cols=64 Identities=23% Similarity=0.348 Sum_probs=34.9 Q ss_pred EEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE---CCCEECCCEEEECCC---C--CCEEEEECCCCCEEEEE Q ss_conf 89999968897447769886799-998778982---893216861798189---9--80224888988299998 Q T0582 146 TVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV---NDEVLGRNAWLRLPE---G--EALSATAGARGAKIWMK 210 (222) Q Consensus 146 ~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d---~~~~~~~Gs~i~~P~---g--~~H~~~a~~~Gc~i~vK 210 (222) ......++||..+-........+ +|++|.+.. +...+.+|+++-.-. + ...+..+ .+.|.+|.- T Consensus 33 ~~~~~~~~~g~~i~~~Gd~~~~ly~I~~G~v~v~~~~~~~l~~G~~fG~~~~l~~~~~~~~~~a-~~~~~v~~i 105 (138) T 1vp6_A 33 ALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELGPGAFFGEMALISGEPRSATVSA-ATTVSLLSL 105 (138) T ss_dssp HCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSSCEEECTTCEECHHHHHHCCCCSSCEEE-SSSEEEEEE T ss_pred HCEEEEECCCCEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE-CCCEEEEEE T ss_conf 3889998999999969987755334304674799963023221112221014799876764998-887799998 No 172 >3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, alternative splicing, mental retardation, metal-binding; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 2wwu_A* Probab=36.72 E-value=12 Score=15.75 Aligned_cols=27 Identities=11% Similarity=0.110 Sum_probs=22.0 Q ss_pred EECCCEEEECCCCCCEEEEECCCCCEEE Q ss_conf 2168617981899802248889882999 Q T0582 181 VLGRNAWLRLPEGEALSATAGARGAKIW 208 (222) Q Consensus 181 ~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~ 208 (222) +..+|+-++.|+|-.|...+ .+.|+++ T Consensus 220 ~l~pGd~lfiP~GW~HaV~t-~edsi~~ 246 (371) T 3k3o_A 220 SVKQGQTLFIPTGWIHAVLT-PVDCLAF 246 (371) T ss_dssp EEETTCEEEECTTCEEEEEE-EEEEEEE T ss_pred EECCCCEEEECCCCEEEEEC-CCCEEEE T ss_conf 98899889868996489875-8787998 No 173 >2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1 Probab=34.93 E-value=18 Score=14.71 Aligned_cols=108 Identities=14% Similarity=0.075 Sum_probs=65.8 Q ss_pred ECCCCCCEECCCCCEEEEEEECCCCCEEEEEEEE---------------------EECCCCCCCCCCC----CCCEEEEE Q ss_conf 0564663315889557999502688705799999---------------------9568985788877----76469999 Q T0582 14 DTDQLEWRPSPMKGVERRMLDRIGGEVARATSIV---------------------RYAPGSRFSAHTH----DGGEEFIV 68 (222) Q Consensus 14 ~~~~~~W~~~p~~Gv~~~~L~~~~~e~g~~t~lv---------------------r~~pG~~~p~H~H----~~~ee~~V 68 (222) ....|...+...+||...-+....+++|.++.+. .-.+|..=-.|.+ ....-++| T Consensus 6 ~~~~M~i~~~~I~Gv~~i~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~~Q~n~S~S~kgvlRGlH~Q~~~~~q~Klv~~ 85 (216) T 2c0z_A 6 RGSHMRLRPLGIEGVWEITPEQRADPRGVFLDWYHVDRFAEAIGRPLRLAQANLSVSVRGVVRGIHFVDVPPGQAKYVTC 85 (216) T ss_dssp CCBCCEEEECSSTTEEEEECEEEEETTEEEEECCCHHHHHHHHSSCCCCCEEEEEEEETTBEEEEEEECTTTCCCEEEEE T ss_pred CCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCEEEEE T ss_conf 99955688640797699979821889929887766999999759986530567631114555433323576430034545 Q ss_pred EEEEEECCC-------CCCC----------CCCEEECCCCCCCCEEC-CCCEEEEEEEEC-CCCCCCCEEEE Q ss_conf 877887278-------6116----------86168858898223264-888089999002-79566560780 Q T0582 69 LDGVFQDEH-------GDYP----------AGTYVRNPPTTSHVPGS-AEGCTIFVKLWQ-FDPADRTQFSK 121 (222) Q Consensus 69 L~G~~~d~~-------~~~~----------~G~y~~~p~gs~H~p~s-~~Gc~~~vkl~q-~~~~d~~~v~i 121 (222) +.|...|-- ..|+ .+.-++-|+|..|+-.+ ++.|.+.++.-. ++++++..++- T Consensus 86 i~G~I~dvvvDlR~~S~T~gk~~~~~l~~~~~~~l~IP~G~aHGf~~L~d~t~i~Y~~s~~y~p~~e~~i~~ 157 (216) T 2c0z_A 86 VRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCYLSSGTYDPATEHGVHP 157 (216) T ss_dssp EESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESSCCCTTTEEEBCT T ss_pred EECEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEECHHHEEHHHHCCHHHEEEEECCCCCCCCCCEEECC T ss_conf 412168888621356762542455204223342366023130011113633403564156557456503668 No 174 >1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A Probab=33.00 E-value=19 Score=14.52 Aligned_cols=102 Identities=12% Similarity=0.001 Sum_probs=54.9 Q ss_pred CCEECCCCCEEEEEEECCCCCEEEEEEE----------------------EEECCCCCCCCCCC----CCCEEEEEEEEE Q ss_conf 6331588955799950268870579999----------------------99568985788877----764699998778 Q T0582 19 EWRPSPMKGVERRMLDRIGGEVARATSI----------------------VRYAPGSRFSAHTH----DGGEEFIVLDGV 72 (222) Q Consensus 19 ~W~~~p~~Gv~~~~L~~~~~e~g~~t~l----------------------vr~~pG~~~p~H~H----~~~ee~~VL~G~ 72 (222) ...++..+|+...-+....+++|.+..+ ..-.+|..=-.|.| ....-+.|++|. T Consensus 2 ~i~~~~I~Gv~~i~p~~f~D~RG~f~e~f~~~~~~~~~~~~~~~~~q~n~S~s~kgvlRGlH~q~~~~~q~Klv~ci~G~ 81 (205) T 1oi6_A 2 QARKLAVDGAIEFTPRVFADDRGLLILPYQEEAFVEAHGGPLFRVAQTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGK 81 (205) T ss_dssp EEEECSSTTCEEEECCCEEETTEEEECSCBHHHHHHHHSSCCCCCCEEEEEEECTTBEEEEEEECTTTCCCEEEEEEESC T ss_pred EEEECCCCCEEEEECCCEECCCCCEEEEECHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHEEEEECEE T ss_conf 05875589659998983285991878887589999851899876368999873598899987426666724347870349 Q ss_pred EECCCC-------CC----------CCCCEEECCCCCCCCEEC-CCCEEEEEEEEC-CCCCCCCEEE Q ss_conf 872786-------11----------686168858898223264-888089999002-7956656078 Q T0582 73 FQDEHG-------DY----------PAGTYVRNPPTTSHVPGS-AEGCTIFVKLWQ-FDPADRTQFS 120 (222) Q Consensus 73 ~~d~~~-------~~----------~~G~y~~~p~gs~H~p~s-~~Gc~~~vkl~q-~~~~d~~~v~ 120 (222) +.|--. .| ..+.-++-|+|..|+-.+ ++.+.+..+.-. +.++++..++ T Consensus 82 i~dvvvDlR~~SpTfg~~~~~~L~~~~~~~l~IP~G~aHGf~~L~d~t~v~Y~~s~~y~p~~e~~i~ 148 (205) T 1oi6_A 82 AMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSRSYVTQDELALS 148 (205) T ss_dssp EEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEEEESSCCCGGGEEECC T ss_pred EEEEEEECCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEC T ss_conf 9999860336899665478887236887669957998579997066455688618756845662765 No 175 >3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp} Probab=31.47 E-value=21 Score=14.37 Aligned_cols=103 Identities=13% Similarity=0.038 Sum_probs=61.9 Q ss_pred EECCCCCEEEEEEECCCCCEEEEE----------------EEEEECCCCCCCCCCCC-CCEEEEEEEEEEECC----CC- Q ss_conf 315889557999502688705799----------------99995689857888777-646999987788727----86- Q T0582 21 RPSPMKGVERRMLDRIGGEVARAT----------------SIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQDE----HG- 78 (222) Q Consensus 21 ~~~p~~Gv~~~~L~~~~~e~g~~t----------------~lvr~~pG~~~p~H~H~-~~ee~~VL~G~~~d~----~~- 78 (222) ++.|..||....|....+++|-++ .+....||..=..|.|. ..+.++|++|.+.+- .. T Consensus 16 ~~~~I~Gv~i~~l~~~~D~RG~f~e~~~~~~~~~~~f~qiy~S~sk~gviRG~H~h~~~~~~~~vi~G~i~~v~~D~r~~ 95 (174) T 3ejk_A 16 ILLPVEGAQLSELRQIPAEGGPVLHMLRLDSPQFSQFGEIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREK 95 (174) T ss_dssp EECSSTTCEEEECCEECCTTSCEECCCCTTCTTCCCCCEEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTT T ss_pred EEEECCCEEEECCCEEECCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEEEEECC T ss_conf 88644986996386688599518986561533226789799999708952013946878779999826399999972038 Q ss_pred --CC---------CC--CCEEECCCCCCCCEEC--CCCEEEEEEEE-CCCCCCCCEEEECC Q ss_conf --11---------68--6168858898223264--88808999900-27956656078076 Q T0582 79 --DY---------PA--GTYVRNPPTTSHVPGS--AEGCTIFVKLW-QFDPADRTQFSKNM 123 (222) Q Consensus 79 --~~---------~~--G~y~~~p~gs~H~p~s--~~Gc~~~vkl~-q~~~~d~~~v~idt 123 (222) .| .+ ...++-|||..|+-.+ ++-++++...- .+++.|...+..|. T Consensus 96 S~t~~k~~~~~l~~~~~~~~l~IPpg~ahGf~~L~~~~siv~y~~~~~y~p~e~~~i~~~d 156 (174) T 3ejk_A 96 SPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANCTDIPHRQGESERAPQDA 156 (174) T ss_dssp CTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEEESSCCCTTSEEECCTTC T ss_pred CCEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC T ss_conf 7304678789914887840798279858999983798569999758764823444617999 No 176 >3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum sensing, DNA-binding; 2.30A {Xanthomonas campestris PV} Probab=31.42 E-value=21 Score=14.37 Aligned_cols=61 Identities=13% Similarity=0.291 Sum_probs=32.0 Q ss_pred EEEECCCCCCCCCCCCCCEEEEEEEEEEE----CCCC------CCCCCCEEECC----CC--CCCCEECCCCEEEEE Q ss_conf 99956898578887776469999877887----2786------11686168858----89--822326488808999 Q T0582 46 IVRYAPGSRFSAHTHDGGEEFIVLDGVFQ----DEHG------DYPAGTYVRNP----PT--TSHVPGSAEGCTIFV 106 (222) Q Consensus 46 lvr~~pG~~~p~H~H~~~ee~~VL~G~~~----d~~~------~~~~G~y~~~p----~g--s~H~p~s~~Gc~~~v 106 (222) +.+|++|...=.-.-+...-++|++|... +++| .+.+|+++-.. .+ ..+...+.+-|.++. T Consensus 36 ~r~~~~g~~I~~~ge~~~~~y~I~~G~v~i~~~~~~G~e~~l~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~~~~~ 112 (230) T 3iwz_A 36 RRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAE 112 (230) T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEESSCEEEEE T ss_pred EEEECCCCEEEECCCCCCEEEEEEECCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCCCHHHHCCCCCEEEEE T ss_conf 99989999999289826679999547188757779998898750689962155566405543202320267579999 No 177 >3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* Probab=26.52 E-value=22 Score=14.14 Aligned_cols=27 Identities=15% Similarity=0.206 Sum_probs=21.7 Q ss_pred EECCCEEEECCCCCCEEEEECCCCCEEE Q ss_conf 2168617981899802248889882999 Q T0582 181 VLGRNAWLRLPEGEALSATAGARGAKIW 208 (222) Q Consensus 181 ~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~ 208 (222) +..+|+-++.|+|-.|...+ .+.|+++ T Consensus 248 ~l~pGd~lfIPsGW~HaV~t-~edsia~ 274 (397) T 3kv9_A 248 VVKQGHTLFVPTGWIHAVLT-SQDCMAF 274 (397) T ss_dssp EEETTCEEEECTTCEEEEEE-EEEEEEE T ss_pred EECCCCEEEECCCCEEEEEC-CCCEEEE T ss_conf 98899789857997089960-6665898 No 178 >3bb6_A Uncharacterized protein YEAR; X-RAY, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Escherichia coli K12} SCOP: b.82.2.13 Probab=26.13 E-value=26 Score=13.81 Aligned_cols=27 Identities=7% Similarity=0.014 Sum_probs=13.4 Q ss_pred CCCEEEECCCCCCEEEEECCCCCEEEE Q ss_conf 686179818998022488898829999 Q T0582 183 GRNAWLRLPEGEALSATAGARGAKIWM 209 (222) Q Consensus 183 ~~Gs~i~~P~g~~H~~~a~~~Gc~i~v 209 (222) .+|.+...||...|+...-.+++.++| T Consensus 70 ~~~~~~~i~Pq~wHrVe~lsdD~~f~l 96 (127) T 3bb6_A 70 EAGQFAVFPPEKWHNIEAMTDDTYFNI 96 (127) T ss_dssp EBTBEEECCSSCEEEEEESSTTCEEEE T ss_pred CCCCCCCCCCCCCEEEEECCCCEEEEE T ss_conf 699961108775488787699979999 No 179 >3hg9_A PILM; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium NYSGXRC, plasmid; 2.40A {Pseudomonas aeruginosa} Probab=25.44 E-value=26 Score=13.76 Aligned_cols=17 Identities=29% Similarity=0.378 Sum_probs=13.6 Q ss_pred ECCCCCEEEEEECCCCC Q ss_conf 88988299998368576 Q T0582 200 AGARGAKIWMKTGHLRF 216 (222) Q Consensus 200 a~~~Gc~i~vKTGHL~~ 216 (222) .-++|.++|||.||--+ T Consensus 113 ~Ip~GsiV~i~~~~~~~ 129 (131) T 3hg9_A 113 PIPEGAVVAVKEGHHHH 129 (131) T ss_dssp TSCTTCEEEEECCCC-- T ss_pred CCCCCCEEEEECCCCCC T ss_conf 47999889997155555 No 180 >3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 2q0a_A* 3etq_A* Probab=24.82 E-value=27 Score=13.67 Aligned_cols=64 Identities=16% Similarity=0.281 Sum_probs=35.0 Q ss_pred EEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE--C---CCEECCCEEEEC-----CCCCCEEEEECCCCCEEEEE Q ss_conf 89999968897447769886799-998778982--8---932168617981-----89980224888988299998 Q T0582 146 TVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV--N---DEVLGRNAWLRL-----PEGEALSATAGARGAKIWMK 210 (222) Q Consensus 146 ~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d--~---~~~~~~Gs~i~~-----P~g~~H~~~a~~~Gc~i~vK 210 (222) ....+.++||..+-.......++ ||++|.+.. . ...+.+|+++-. ..-...+..| .+.|.+|+- T Consensus 94 ~~~~~~~~~g~~i~~~g~~~~~ly~i~~G~v~v~~~~~~~~~l~~G~~fGe~~~~~~~~~~~~~~a-~~~~~~~~i 168 (202) T 3bpz_A 94 KLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTRGRRTASVRA-DTYCRLYSL 168 (202) T ss_dssp HCEEEEECTTCEEECTTSBCCEEEEEEECEEEEECTTSCCEEEETTCEECHHHHHHCSBCSSEEEE-SSCEEEEEE T ss_pred HCEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEECCCCCHHHHHHHCCCCCCCCEEE-CCCEEEEEE T ss_conf 378999789852134699787799998428999987927999418975127887226877772798-665499998 No 181 >3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; YP_546034.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT} Probab=22.15 E-value=31 Score=13.36 Aligned_cols=64 Identities=19% Similarity=0.184 Sum_probs=34.5 Q ss_pred EEEEEEECCCCCCCCCCCCCEEE-EEEEEEEEE----CCC------EECCCEEEEC-----CCCCCEEEEECCCCCEEEE Q ss_conf 89999968897447769886799-998778982----893------2168617981-----8998022488898829999 Q T0582 146 TVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTV----NDE------VLGRNAWLRL-----PEGEALSATAGARGAKIWM 209 (222) Q Consensus 146 ~v~L~r~~pG~~~p~h~h~GeEi-~VLeG~l~d----~~~------~~~~Gs~i~~-----P~g~~H~~~a~~~Gc~i~v 209 (222) ......+++|..+-........+ +|++|.+.. +++ .+.+|+++-. +.-...+..| .+.|.+|. T Consensus 61 ~~~~~~~~~g~~I~~eGd~~~~lyiI~~G~v~i~~~~~~g~~~~i~~~~~G~~fGe~~ll~~~~~~~t~~A-~~~~~ll~ 139 (187) T 3gyd_A 61 YMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIGEMSMIDGMPRSASCVA-SLPTDFAV 139 (187) T ss_dssp TCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEESHHHHHHCCCCSSEEEE-EEEEEEEE T ss_pred HCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCEEEEEC-CCCEEEEE T ss_conf 29899989999999844665546420132312102222333322102101232035564179973477864-78879999 Q ss_pred E Q ss_conf 8 Q T0582 210 K 210 (222) Q Consensus 210 K 210 (222) - T Consensus 140 I 140 (187) T 3gyd_A 140 L 140 (187) T ss_dssp E T ss_pred E T ss_conf 7 No 182 >2yu1_A JMJC domain-containing histone demethylation protein 1A; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A Probab=21.71 E-value=31 Score=13.30 Aligned_cols=27 Identities=11% Similarity=0.159 Sum_probs=21.9 Q ss_pred EECCCEEEECCCCCCEEEEECCCCCEEE Q ss_conf 2168617981899802248889882999 Q T0582 181 VLGRNAWLRLPEGEALSATAGARGAKIW 208 (222) Q Consensus 181 ~~~~Gs~i~~P~g~~H~~~a~~~Gc~i~ 208 (222) ...+|+-++.|.|-.|...+ .+.|+++ T Consensus 269 ~l~pGdtlfIPsGW~HaV~t-~~dsia~ 295 (451) T 2yu1_A 269 ELKQGYTFVIPSGWIHAVYT-PTDTLVF 295 (451) T ss_dssp EECTTCEEEECTTCEEEEEC-SSCEEEE T ss_pred EECCCCEEEECCCCCEEEEC-CCCEEEE T ss_conf 98899889988998278872-5566898 No 183 >1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A Probab=21.11 E-value=32 Score=13.23 Aligned_cols=27 Identities=26% Similarity=0.215 Sum_probs=13.4 Q ss_pred CEEEECCCCCCEEEEECCCCCEEEEEE Q ss_conf 617981899802248889882999983 Q T0582 185 NAWLRLPEGEALSATAGARGAKIWMKT 211 (222) Q Consensus 185 Gs~i~~P~g~~H~~~a~~~Gc~i~vKT 211 (222) +.-++.|+|-.|...+-++.|.++-++ T Consensus 127 ~~~l~IP~G~aHGf~~L~d~~~i~Y~~ 153 (196) T 1wlt_A 127 HYMLWIPPGFAHGFQALEDSIVIYFIT 153 (196) T ss_dssp CCEEEECTTEEEEEEESSSEEEEEEEE T ss_pred CCEEEECCCEEEEEEECCCCEEEEEEC T ss_conf 446997531636776326320589862 No 184 >3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A Probab=20.81 E-value=33 Score=13.19 Aligned_cols=61 Identities=13% Similarity=0.101 Sum_probs=34.8 Q ss_pred EEEECCCCCCCCCCCCCCEEEEEEEEEEE----CCCC------CCCCCCEEECCCC--CCCCEECCCCEEEEE Q ss_conf 99956898578887776469999877887----2786------1168616885889--822326488808999 Q T0582 46 IVRYAPGSRFSAHTHDGGEEFIVLDGVFQ----DEHG------DYPAGTYVRNPPT--TSHVPGSAEGCTIFV 106 (222) Q Consensus 46 lvr~~pG~~~p~H~H~~~ee~~VL~G~~~----d~~~------~~~~G~y~~~p~g--s~H~p~s~~Gc~~~v 106 (222) +.+|++|...=...-+...-++|++|... +.+| .+.+|+++-.... ..+...+-+.|.++. T Consensus 34 ~~~y~kg~~I~~~g~~~~~ly~l~~G~v~i~~~~~dG~e~~l~~~~~g~~~G~~~~~~~~~~~~A~~~~~v~~ 106 (250) T 3e6c_C 34 IRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCW 106 (250) T ss_dssp EEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEESSSEEEEE T ss_pred EEEECCCCEEECCCCCCCEEEEEEECEEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEECCHHHH T ss_conf 9998998999808981677999996889997677999989999714773874211002654137810340031 No 185 >1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A* Probab=20.57 E-value=33 Score=13.16 Aligned_cols=99 Identities=9% Similarity=-0.067 Sum_probs=46.5 Q ss_pred CCCEEEEEEECCCCCEEEEEEEEE-------------------------ECCCCCCCCCCCCCCEEEEEEE-EEEEC--- Q ss_conf 895579995026887057999999-------------------------5689857888777646999987-78872--- Q T0582 25 MKGVERRMLDRIGGEVARATSIVR-------------------------YAPGSRFSAHTHDGGEEFIVLD-GVFQD--- 75 (222) Q Consensus 25 ~~Gv~~~~L~~~~~e~g~~t~lvr-------------------------~~pG~~~p~H~H~~~ee~~VL~-G~~~d--- 75 (222) .+||...-+..-.+++|.++-+.+ -.+|..=-.|.|+....++|+. |...| T Consensus 18 I~Gv~~i~~~~~~D~RG~F~e~f~~~~~~~~~~~~~~~~~~~vQ~n~S~S~kgvlRGlH~q~~~k~i~~~~~G~I~dvvv 97 (197) T 1nxm_A 18 IPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGTWV 97 (197) T ss_dssp STTCEEEECCEEEETTEEEEEEEEHHHHTTTTCCGGGGTTCCCEEEEEEEETTBEEEEEECSSCEEEEECSSCCEEEEEE T ss_pred CCCCEEEECCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCEEEEEEEECCCEEEEEE T ss_conf 89628997985175991895731457898708984213131057778860487799996077507999971572388999 Q ss_pred -CC--CC--------CCCCCEEECCCCCCCCEEC-CCCEEEEEEEE-CCCCC-CCCEEEECC Q ss_conf -78--61--------1686168858898223264-88808999900-27956-656078076 Q T0582 76 -EH--GD--------YPAGTYVRNPPTTSHVPGS-AEGCTIFVKLW-QFDPA-DRTQFSKNM 123 (222) Q Consensus 76 -~~--~~--------~~~G~y~~~p~gs~H~p~s-~~Gc~~~vkl~-q~~~~-d~~~v~idt 123 (222) -. -. ..++.-++-|+|..|+-.+ ++.|++.++.- .+.+. +.....+.. T Consensus 98 D~R~S~tfg~~~~~~l~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~s~~y~p~~e~~~~~i~~ 159 (197) T 1nxm_A 98 DLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDFVAYSYLVNDYWALELKPKYAFVNY 159 (197) T ss_dssp ECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSEEEEEEEESSCCCGGGGGGCEECCT T ss_pred EECCCCCCCCEEEEEECCCCEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEECC T ss_conf 84166535717788842784589469860689870310277788367748334687235638 No 186 >1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A* Probab=20.09 E-value=34 Score=13.10 Aligned_cols=26 Identities=8% Similarity=-0.052 Sum_probs=12.7 Q ss_pred CCEEECCCCCCCCEEC-CCCEEEEEEE Q ss_conf 6168858898223264-8880899990 Q T0582 83 GTYVRNPPTTSHVPGS-AEGCTIFVKL 108 (222) Q Consensus 83 G~y~~~p~gs~H~p~s-~~Gc~~~vkl 108 (222) +.-++-|+|..|+-.+ ++.+++..+. T Consensus 128 ~~~l~IP~G~aHGf~tL~d~t~i~Y~~ 154 (225) T 1upi_A 128 RRTIYVSEGLAHGFLALQDNSTVMYLC 154 (225) T ss_dssp CCEEEECTTCEEEEEECSSSEEEEEEE T ss_pred CCEEEECCCCEEEEEEECCCCEEEEEC T ss_conf 414896389679998606865678856 Done!