Query T0583 LR17, , 152 residues Match_columns 152 No_of_seqs 111 out of 865 Neff 9.3 Searched_HMMs 22458 Date Sun Jun 13 15:21:42 2010 Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0583.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0583.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1t17_A Conserved hypothetical 100.0 2.4E-32 1.1E-36 223.3 17.8 148 1-150 1-148 (148) 2 2d4r_A Hypothetical protein TT 99.9 8.9E-23 3.9E-27 162.7 19.8 141 1-147 1-145 (147) 3 2rer_A Multifunctional cyclase 99.9 1.4E-22 6.4E-27 161.4 16.8 147 1-151 5-154 (173) 4 2kf2_A Putative polyketide cyc 99.9 1.2E-21 5.1E-26 155.7 16.0 147 1-151 1-151 (167) 5 3ggn_A Uncharacterized protein 99.9 1.6E-21 7.2E-26 154.7 14.9 144 2-151 4-147 (155) 6 3f08_A Uncharacterized protein 99.8 8.9E-17 3.9E-21 124.7 16.6 135 1-145 1-137 (146) 7 2pcs_A Conserved protein; stru 99.7 5E-16 2.2E-20 120.0 16.1 142 1-150 1-148 (162) 8 2ns9_A Hypothetical protein AP 99.7 1.4E-15 6.2E-20 117.1 16.8 137 3-146 14-156 (157) 9 3ijt_A SMU.440, putative uncha 99.7 6.3E-15 2.8E-19 113.0 15.8 136 3-147 19-155 (155) 10 2qpv_A Uncharacterized protein 99.5 4.6E-13 2.1E-17 101.2 14.5 130 1-146 26-155 (156) 11 3k3k_A Abscisic acid receptor 99.3 4.3E-11 1.9E-15 88.7 14.1 143 6-149 54-200 (211) 12 3jrs_A PYL1, putative uncharac 99.3 7E-10 3.1E-14 81.1 16.8 142 6-148 58-206 (208) 13 3kdh_A PYL2, putative uncharac 99.2 5.4E-09 2.4E-13 75.5 19.3 140 6-147 39-184 (190) 14 2flh_A Cytokinin-specific bind 99.1 6E-09 2.7E-13 75.1 16.0 136 2-141 3-147 (155) 15 1em2_A MLN64 protein; beta bar 99.1 1.8E-08 8E-13 72.1 17.5 142 4-147 68-226 (229) 16 2vq5_A S-norcoclaurine synthas 99.1 7.4E-09 3.3E-13 74.6 14.0 114 2-120 29-152 (201) 17 1z94_A Conserved hypothetical 98.9 1E-07 4.5E-12 67.4 15.1 112 1-114 1-116 (147) 18 1jss_A Stard4, cholesterol-reg 98.9 1.2E-07 5.5E-12 66.8 15.1 141 3-145 68-222 (224) 19 2i9y_A Major latex protein-lik 98.9 1E-08 4.5E-13 73.7 9.5 115 3-119 18-139 (166) 20 2vjg_A Major allergen DAU C 1; 98.9 4.1E-07 1.8E-11 63.5 17.2 115 2-120 4-126 (154) 21 1tw0_A Pathogenesis-related cl 98.8 1.3E-06 5.8E-11 60.4 17.8 115 3-120 4-125 (157) 22 1xuv_A Hypothetical protein MM 98.8 1.6E-06 7.3E-11 59.8 17.9 111 3-117 23-139 (178) 23 2e3n_A Lipid-transfer protein 98.8 2.9E-06 1.3E-10 58.2 18.8 143 3-146 74-246 (255) 24 1xfs_A NC_840354, conserved hy 98.7 2.5E-06 1.1E-10 58.5 16.9 139 3-147 11-167 (178) 25 2r55_A STAR-related lipid tran 98.7 4.2E-06 1.8E-10 57.2 17.5 143 3-147 68-229 (231) 26 2qim_A PR10.2B; trans-zeatin, 98.7 4E-06 1.8E-10 57.3 16.7 116 1-120 1-126 (158) 27 3fo5_A Thioesterase, adipose a 98.6 3.5E-06 1.6E-10 57.6 15.8 132 3-139 89-239 (258) 28 3eli_A AHSA1, AHA1 domain prot 98.6 4.2E-06 1.9E-10 57.2 15.8 114 1-118 1-121 (152) 29 1ln1_A PC-TP, phosphatidylchol 98.6 7.6E-06 3.4E-10 55.5 17.0 140 3-146 53-209 (214) 30 1e09_A PRU AV 1; allergen, maj 98.6 9.1E-06 4E-10 55.0 17.4 113 3-119 4-125 (159) 31 1xn5_A BH1534 unknown conserve 98.5 1.8E-06 7.8E-11 59.6 12.5 96 1-114 4-99 (146) 32 2il5_A Hypothetical protein; s 98.5 2.5E-05 1.1E-09 52.3 17.9 111 3-117 15-129 (171) 33 1xn6_A Hypothetical protein BC 98.5 1.7E-06 7.6E-11 59.6 10.6 96 1-113 7-102 (143) 34 3ie5_A Phenolic oxidative coup 98.4 5.2E-05 2.3E-09 50.2 17.3 113 3-120 11-132 (165) 35 2nn5_A Hypothetical protein EF 98.4 4.8E-05 2.2E-09 50.4 17.1 97 3-117 37-133 (184) 36 2kew_A Uncharacterized protein 98.4 1.4E-06 6.3E-11 60.2 8.7 95 1-113 9-103 (152) 37 2k5g_A Uncharacterized protein 98.1 1E-05 4.5E-10 54.7 8.5 104 2-114 19-135 (191) 38 1zxf_A CALC; SELF-sacrificing 98.1 8.1E-05 3.6E-09 49.0 12.0 135 2-147 4-151 (155) 39 2pso_A STAR-related lipid tran 97.9 0.0014 6.2E-08 41.2 15.2 126 3-132 76-214 (237) 40 1vjh_A BET V I allergen family 97.7 0.00069 3.1E-08 43.1 11.7 86 3-120 6-95 (122) 41 1x53_A Activator of 90 kDa hea 97.2 0.0017 7.6E-08 40.6 8.7 97 3-115 12-111 (145) 42 2ffs_A Hypothetical protein PA 94.9 0.19 8.5E-06 27.7 15.5 133 3-145 2-150 (157) 43 2ejx_A ST0812; arcaea, unknown 82.4 2.3 0.0001 20.8 15.1 123 1-145 4-127 (139) No 1 >1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural genomics, protein structure initiative; NMR {Caulobacter crescentus CB15} SCOP: d.129.3.6 Probab=100.00 E-value=2.4e-32 Score=223.33 Aligned_cols=148 Identities=32% Similarity=0.576 Sum_probs=142.2 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 98088999865998999999860763255404410579984015898418999973036741104566678725761899 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) |+++++++.|++||++||++|+|+|+||+|+|+|++++|+++.+++.+....+.+.+++.++..++.+.+...++...+. T Consensus 1 m~~~~~~~~i~~~~e~vf~vI~Dve~Yp~FlP~c~~s~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (148) T 1t17_A 1 MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGAVSTVDAEAQVGFSFLREKFATRVRRDKDARSID 80 (148) T ss_dssp CCEEEEEEEESSCTHHHHHHHTTTTCCSSCCSSCCCCCEEEEEEETTEEEEEEEEECSTTSSCCEEEEEEEEETTTCEEE T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEE T ss_conf 98327899817999999999998865556563427646875466445543100567776100006999853147734899 Q ss_pred EEECCCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 9872631000001357752568971799999986247624899999999999999999999999973488 Q T0583 81 VKYIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRADQIYGL 150 (152) Q Consensus 81 ~~~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~~~g~ 150 (152) +...+|+|+.+.|.|+|.|.+ .+|+|+|.++|++++++++.+++++++.++++|++||++||++|||+ T Consensus 81 ~~~~~~~~~~~~~~w~f~~~~--~gT~V~~~l~~e~~~~l~~~~~~~~~~~~~~~~i~aF~~Ra~~lyg~ 148 (148) T 1t17_A 81 VSLLYGPFKRLNNGWRFMPEG--DATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHGA 148 (148) T ss_dssp EEESSTTSSCEEEEEEEEEET--TEEEEEEEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_pred EECCCCHHHHCCCCEEECCCC--CCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 960660665236505532588--84499999999757589999999999999999999999999997393 No 2 >2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus HB8} SCOP: d.129.3.6 Probab=99.91 E-value=8.9e-23 Score=162.72 Aligned_cols=141 Identities=17% Similarity=0.250 Sum_probs=122.1 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 98088999865998999999860763255404410579984015898418999973036741104566678725761899 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) |++++.++.|+|||++||++++|+++||+|+|+|++++++...+++ . ..++.+...+...++.++++..+++..+. T Consensus 1 M~~i~~~~~I~ap~~~V~~~l~d~~~~~~w~p~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 76 (147) T 2d4r_A 1 MPEVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGAR--T--RSRWVAVAMGKKVRWLEEEEWDDENLRNR 76 (147) T ss_dssp -CEEEEEEEESSCHHHHHHHHHCHHHHGGGCTTEEEEEEEEEETTE--E--EEEEEEEETTEEEEEEEEEEEETTTTEEE T ss_pred CCEEEEEEEECCCHHHHHHHHHCHHHHHHHCCCCEEEEEEEECCCE--E--EEEEEEEECCEEEEEEEEEEEECCCCEEE T ss_conf 9869999998999999999997988777645571899999707997--9--99999995670787889999954853699 Q ss_pred EEECCCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9872631000001357752568971799999986247624----899999999999999999999999973 Q T0583 81 VKYIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT----LGLLMGTMFDLAFKKFSEAFEKRADQI 147 (152) Q Consensus 81 ~~~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l----~~~~~~~~~~~~~~~~~~af~~Ra~~~ 147 (152) +....++++.+.|+|+|+|.+ ++|+|+++++|++++++ ++.+++..++...++++++|++|+++. T Consensus 77 ~~~~~~~~~~~~g~~~l~~~~--~gT~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lk~r~~~~ 145 (147) T 2d4r_A 77 FFSPEGDFDRYEGTWVFLPEG--EGTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVLAA 145 (147) T ss_dssp EEEEEESCSEEEEEEEEEECS--SSEEEEEEEEEECCCTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT T ss_pred EEECCCCCCEEEEEEEEEECC--CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 874277500248999999989--985899999999747607789999999999999999999999999873 No 3 >2rer_A Multifunctional cyclase-dehydratase-3-O-methyl transferase TCMN; aromatase, polyketide, helix-GRIP, anticancer, antibiotic; 1.90A {Streptomyces glaucescens} SCOP: d.129.3.6 PDB: 2res_A 2rez_A Probab=99.90 E-value=1.4e-22 Score=161.40 Aligned_cols=147 Identities=12% Similarity=0.218 Sum_probs=122.5 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 98088999865998999999860763255404410579984015898418999973036741104566678725761899 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) |.+++.++.|+|||++||++|+|+++||+|+|+|.+++++++.+++.+ ...++.++..+...+|.+.+++.+++..+. T Consensus 5 ~~~~e~si~I~Ap~~~Vw~~l~D~~~~p~~~p~~~~~~v~~~~~~~~~--~~~~~~~~~~g~~~~~~~~v~~~~~~~~i~ 82 (173) T 2rer_A 5 AARTDNSIVVNAPFELVWDVTNDIEAWPELFSEYAEAEILRQDGDGFD--FRLKTRPDANGRVWEWVSHRVPDKGSRTVR 82 (173) T ss_dssp CEEEEEEEEESSCHHHHHHHHTCGGGHHHHCSSEEEEEEEECCSSCEE--EEEEECCCTTSCCCEEEEEEEEEGGGTEEE T ss_pred CCEEEEEEEECCCHHHHHHHHHCHHHHHHHCCCCEEEEEEECCCCCEE--EEEEEEECCCCEEEEEEEEEEECCCCCEEE T ss_conf 855166899789999999999776767674704179999851699439--999999744770677899999818863999 Q ss_pred EEEC-CCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 9872-631000001357752568971799999986247624--8999999999999999999999999734889 Q T0583 81 VKYI-DGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT--LGLLMGTMFDLAFKKFSEAFEKRADQIYGLG 151 (152) Q Consensus 81 ~~~~-~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l--~~~~~~~~~~~~~~~~~~af~~Ra~~~~g~~ 151 (152) +... +++|+.+.|+|+|+|.+ ++|+|+++++|+++.++ ....+...++.....++++++++||+.+.++ T Consensus 83 ~~~~~~~~~~~~~g~w~~~~~~--~gt~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~L~~lk~~~E~~~~~~ 154 (173) T 2rer_A 83 AHRVETGPFAYMNLHWTYRAVA--GGTEMRWVQEFDMKPGAPFDNAHMTAHLNTTTRANMERIKKIIEDRHREG 154 (173) T ss_dssp EEESSCTTEEEEEEEEEEEEET--TEEEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT T ss_pred EEECCCCCCCCCEEEEEEEECC--CCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 9940588766507999999879--96499999999977886430889999997678999999999997542015 No 4 >2kf2_A Putative polyketide cyclase; aromatase/cyclase, ARO/CYC, structural genomics, PSI-2, protein structure initiative; NMR {Streptomyces coelicolor A3} Probab=99.88 E-value=1.2e-21 Score=155.67 Aligned_cols=147 Identities=15% Similarity=0.246 Sum_probs=122.1 Q ss_pred CC-EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEE Q ss_conf 98-08899986599899999986076325540441057998401589841899997303674110456667872576189 Q T0583 1 MP-QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENII 79 (152) Q Consensus 1 M~-~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i 79 (152) |+ +++.++.|+|||++||++|+|+++||+|+|+|.+++++++.+++.+ ....+.++.++....+.+++++.++...+ T Consensus 1 m~~h~e~si~I~Ap~e~Vw~~l~D~~~~p~w~p~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~v~~~~~~r~~ 78 (167) T 2kf2_A 1 MAGHTDNEITIAAPMELVWTMTNDIEKWPGLFSEYASVEVLGRDDDKVT--FRLTMHPDADGKVWSWVSERVADPVTRTV 78 (167) T ss_dssp CCEEEEEEEEECSCHHHHHHHHHCGGGGGGTCTTCSEEEEEEEETTEEE--EEEECCCCTTSCCCEEEEEEEEETTTTEE T ss_pred CCCEEEEEEEECCCHHHHHHHHHCHHHHHHHCCCCEEEEEEECCCCCCE--EEEEEEECCCCEEEEEEEEEEECCCCEEE T ss_conf 9987888999689999999999786667765667359999953799657--99999965575787423899974894799 Q ss_pred EEE-ECCCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 998-726310000013577525689717999999862476--248999999999999999999999999734889 Q T0583 80 DVK-YIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKS--RTLGLLMGTMFDLAFKKFSEAFEKRADQIYGLG 151 (152) Q Consensus 80 ~~~-~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~--~l~~~~~~~~~~~~~~~~~~af~~Ra~~~~g~~ 151 (152) .+. ...++++.+.|+|+|+|.+ ++|+|+++++|+++. ++...++...+++..++.+++|+++||++.|.. T Consensus 79 ~~~~~~~~~~~~~~g~w~l~~~~--~GT~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lk~~~E~~a~~~ 151 (167) T 2kf2_A 79 RAQRVETGPFQYMNIVWEYAETA--EGTVMRWTQDFAMKPDAPVDDAWMTDNINRNSRTQMALIRDRIEQAAGER 151 (167) T ss_dssp EEEESSCSSEEEEEEEEEEEEET--TEEEEEEEEEEEECTTCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS T ss_pred EEEEECCCCCCCEEEEEEEEECC--CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99950487554518999998158--97699999999976981667999999998889999999999999763256 No 5 >3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A Probab=99.88 E-value=1.6e-21 Score=154.73 Aligned_cols=144 Identities=16% Similarity=0.180 Sum_probs=119.0 Q ss_pred CEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEE Q ss_conf 80889998659989999998607632554044105799840158984189999730367411045666787257618999 Q T0583 2 PQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIIDV 81 (152) Q Consensus 2 ~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~ 81 (152) ..|+.++.|+|||++||++++|+++||+|+|+|.+++++... +.. ......+.+....+...++...++..+.+ T Consensus 4 t~i~~si~I~aP~~~Vw~~l~D~~~~~~w~p~v~~v~~~~~~----~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~i~~ 77 (155) T 3ggn_A 4 TVVRDAVTIGKPAEQLYAVWRDLPGLPLLMTHLRSVEVLDDK----RSR--WTVEAPAPLGTVSWEAELTADEPGKRIAW 77 (155) T ss_dssp CEEEEEEEESSCHHHHHHHHHCGGGHHHHSTTCCEEEECSSS----EEE--EEEECCTTTCEEEEEEEEEEEETTTEEEE T ss_pred EEEEEEEEECCCHHHHHHHHHCHHHHHHHCCCCCEEEEECCC----CCE--EEEEECCEEEEEEEEEEEEEECCCCEEEE T ss_conf 699999998999999999986976766526674105763367----723--78972010200100179998328946789 Q ss_pred EECCCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 8726310000013577525689717999999862476248999999999999999999999999734889 Q T0583 82 KYIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRADQIYGLG 151 (152) Q Consensus 82 ~~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~~~g~~ 151 (152) ....|++..+.|.|+|++.+++++|+++++++|++++++++++.+++++..+++++++..+|.+++..+| T Consensus 78 ~~~~g~~~~~~g~~~~~~~~~~~~t~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lK~~~E~G 147 (155) T 3ggn_A 78 RSLPGARIENSGEVLFRPAPGARGTEVVVRLTYRPPGGSAGAVIARMFNQEPSQQLRDDLMRFKREQELG 147 (155) T ss_dssp EECTTCSSCEEEEEEEEECSSSSCEEEEEEEEEC----------------CHHHHHHHHHHHHHHHHHHT T ss_pred EEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 9603775211579999991368836999999887274108999999999999999999999999997378 No 6 >3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovarkonkukian} PDB: 3cnw_A Probab=99.75 E-value=8.9e-17 Score=124.74 Aligned_cols=135 Identities=10% Similarity=0.079 Sum_probs=100.1 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 98088999865998999999860763255404410579984015898418999973036741104566678725761899 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) |++++.|+.|+||||+||++++|+++||+|+|++.+++.... + . ... .....++ ...+..+...+++..+. T Consensus 1 M~~~~~s~~I~Ap~e~VW~~l~D~~~~~~W~p~v~~~~~~~~---g-~-~~~--~~~~~~~--~~~e~~~~~~~~~~~~~ 71 (146) T 3f08_A 1 MAHTTTSMEIFGSTEQVWQLIGGFNSLPDWLPYIPSSKLTEG---G-R-VRH--LANPDGE--TIIERLEVFNDKERYYT 71 (146) T ss_dssp -CEEEEEEEESSCHHHHHHHHCSTTCHHHHCTTCCEEEEEGG---G-T-EEE--EECTTSC--EEEEEEEEEETTTTEEE T ss_pred CCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEEECC---C-C-EEE--EEECCCC--EEEEEEEEEECCCCEEE T ss_conf 983899999958999999976571760010587888988459---8-6-899--9960896--55799999816886399 Q ss_pred EEECCC--CCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 987263--10000013577525689717999999862476248999999999999999999999999 Q T0583 81 VKYIDG--PFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRAD 145 (152) Q Consensus 81 ~~~~~g--~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~ 145 (152) +...++ +++.+.+.|+|+|..++++|+|+++.+|++.+. ....+..+++.+++..+++++++-. T Consensus 72 ~~~~~~~~~~~~~~~~~~l~p~~~g~~T~vt~~~~f~p~~~-~~~~~~~~~~~~~~~~L~~L~~~f~ 137 (146) T 3f08_A 72 YSIMNAPFPVTNYLSTIQVKEGTESNTSLVEWSGTFTPVAV-SDEEAINLVHGIYSDGLKALQHAFL 137 (146) T ss_dssp EEEEECSSSEEEEEEEEEEEECSSTTCEEEEEEEEEEESSS-CHHHHHHHHHHHHHHHHHHHHHHTT T ss_pred EEEEECCCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCC-CHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99995585508775079999616899489999999961899-9899999999999999999998750 No 7 >2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI- 2, protein structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus HTA426} SCOP: d.129.3.10 Probab=99.72 E-value=5e-16 Score=119.98 Aligned_cols=142 Identities=12% Similarity=0.178 Sum_probs=106.5 Q ss_pred CC-EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEE---CCC Q ss_conf 98-08899986599899999986076325540441057998401589841899997303674110456667872---576 Q T0583 1 MP-QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLK---PDE 76 (152) Q Consensus 1 M~-~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~ 76 (152) |. .++.+..|++|||+||++|+|+++|++++|+|+++++++.. ...+.+.+++++++.++..++... ++. T Consensus 1 M~m~~sg~~~v~a~~e~Vw~~l~D~e~~a~ciPg~~~~e~~~d~------~~~~~~~v~~g~i~~~~~~~~~~~~~~~~~ 74 (162) T 2pcs_A 1 MSLNGNGSIELKGTVEEVWSKLMDPSILSKCIMGCKSLELIGED------KYKADLQIGIAAVKGKYDAIIEVTDIKPPY 74 (162) T ss_dssp --CEEEEEEEEESCHHHHHHHHTCHHHHHHHSTTEEEEEEEETT------EEEEEEEECCGGGCEEEEEEEEEEEEETTT T ss_pred CEEECCCEEEECCCHHHHHHHHCCHHHHHHHCCCCEEEEECCCC------EEEEEEEEEEEEEEEEEEEEEEEEECCCCC T ss_conf 90753656995899999999974999987229780467985998------799999997721878999999994058853 Q ss_pred EE-EEEEEC-CCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 18-999872-631000001357752568971799999986247624899999999999999999999999973488 Q T0583 77 NI-IDVKYI-DGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRADQIYGL 150 (152) Q Consensus 77 ~~-i~~~~~-~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~~~g~ 150 (152) .. +..... .+......+.|.+.+.+ +++|+|++++++++.++ ++.+.+++++.++++|+++|.++..++.+. T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~T~v~~~~~~~~~g~-la~~g~~~i~~~a~~l~~~f~~~l~~~l~~ 148 (162) T 2pcs_A 75 HYKLLVNGEGGPGFVNAEGVIDLTPIN-DECTQLTYTYSAEVGGK-VAAIGQRMLGGVAKLLISDFFKKIQKEIAK 148 (162) T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEESS-SSEEEEEEEEEEEEESG-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_pred EEEEEECCCCCCCCCCCEEEEEEEECC-CCCEEEEEEEEEEECCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 089960333566643211479984058-98379999999996986-998758999999999999999999998656 No 8 >2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, protein structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10 Probab=99.70 E-value=1.4e-15 Score=117.14 Aligned_cols=137 Identities=9% Similarity=0.165 Sum_probs=89.1 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEE-EECCCEEEEE Q ss_conf 088999865998999999860763255404410579984015898418999973036741104566678-7257618999 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVL-LKPDENIIDV 81 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~i~~ 81 (152) +++.++.|+|||++||++++|+++|++|+|+|+++++++... .. .........+........++ ..++...... T Consensus 14 k~e~si~I~ap~e~Vw~~l~D~~~~~~w~P~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (157) T 2ns9_A 14 RYEGSFEVSKTPEEVFEFLTDPKRFSRAFPGFKSVEVEDGSF---TI--ELRLSLGPLRGDARVRASFEDLEKPSKATVK 88 (157) T ss_dssp EEEEEEEESSCHHHHHHHHTCHHHHGGGSTTEEEEEEETTEE---EE--EEEEESSSSEEEEEEEEEEEEEETTTEEEEE T ss_pred EEEEEEEECCCHHHHHHHHHCHHHHHCCCCCEEEEEECCCCC---CE--EEEEEEEEEEEEEEEEEEEEECCCCCEEEEE T ss_conf 998799968999999998739655531698518865247764---20--7999862251025405899852666404676 Q ss_pred E--ECCCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8--72631000001357752568971799999986247624---89999999999999999999999997 Q T0583 82 K--YIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT---LGLLMGTMFDLAFKKFSEAFEKRADQ 146 (152) Q Consensus 82 ~--~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l---~~~~~~~~~~~~~~~~~~af~~Ra~~ 146 (152) . ..++......+.|++++. +++|+|++++++++.+++ .+.+++..+++.+++++++|++++++ T Consensus 89 ~~~~~~~~~~~~~~~~~l~~~--~~gt~v~~~~~~~~~g~l~~l~~~~v~~~~~~~~~~~l~~Lk~~le~ 156 (157) T 2ns9_A 89 GSGRGAGSTLDFTLRFAVEPS--GGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVISGVKRELGE 156 (157) T ss_dssp EEEECSSEEEEEEEEEEEEEE--TTEEEEEEEEEEEEEEGGGGSCHHHHHHHHHHHHHHHHHHHHHHHTC T ss_pred ECCCCCCCCCEEEEEEEEEEC--CCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 022356753203899998426--99749999999996873898769999999999999999999998753 No 9 >3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} PDB: 2b79_A Probab=99.66 E-value=6.3e-15 Score=113.03 Aligned_cols=136 Identities=7% Similarity=0.020 Sum_probs=102.8 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEE Q ss_conf 08899986599899999986076325540441057998401589841899997303674110456667872576189998 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIIDVK 82 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~ 82 (152) +++.++.|+||||+||++++|+++||+|+|.+++++.... .+.+......+. .+ .. +...++...++..+.+. T Consensus 19 ~~s~si~I~Ap~e~Vw~~l~D~~~~p~W~p~~~~~~~~~~--~~~g~~~~~~~~--~~-~~--~~~~i~~~~p~~~~~~~ 91 (155) T 3ijt_A 19 KFSFELAVNTKKEDAWTYYSQVNQWFVWEGDLEQISLEGE--FTTGQKGKMKME--DM-PE--LAFTLVEVRENQCFSDL 91 (155) T ss_dssp EEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEESSS--SSTTCEEEEEET--TS-CC--EEEEECCCBTTTEEEEE T ss_pred EEEEEEEECCCHHHHHHHHHHHCCHHHHCCCCEEEEECCC--CCCCEEEEEEEC--CC-CE--EEEEEEEECCCCEEEEE T ss_conf 8999999879999999998733536550677505786252--246649999968--99-73--89999997289599999 Q ss_pred ECCCCCHHHEEEEEEEECCCCCEEEEEEEEEEE-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 726310000013577525689717999999862-47624899999999999999999999999973 Q T0583 83 YIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDYE-FKSRTLGLLMGTMFDLAFKKFSEAFEKRADQI 147 (152) Q Consensus 83 ~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e-~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~~ 147 (152) ... ++..+.+.|.+.+.++ ++|+++++++|. +..++.+.++++.+...+++.++++++.||.| T Consensus 92 ~~~-~~~~~~~~~~~~~~~~-g~t~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~LK~~aEs~ 155 (155) T 3ijt_A 92 TAT-PFGNVLFEHEILENPD-GTISLRHSVSLTDSDTTEEALAFLKQIFADVPESVGKLKQILETV 155 (155) T ss_dssp EEE-TTEEEEEEEEEEECTT-SCEEEEEEEEESCCSCCHHHHHHHHHHHTTHHHHHHHHHHHHTC- T ss_pred ECC-CCCEEEEEEEEEECCC-CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 657-8723578999985589-944899999982787067799999999988999999999996479 No 10 >2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8 Probab=99.52 E-value=4.6e-13 Score=101.21 Aligned_cols=130 Identities=12% Similarity=-0.001 Sum_probs=93.1 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 98088999865998999999860763255404410579984015898418999973036741104566678725761899 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) |...+.+++|++|+++||++++|++|+|+|++++.++...++ .. +....+..+ ++..+++.+.+...|+ T Consensus 26 ~~~~~v~vtI~rP~~eVy~f~~DpenlP~W~~~l~~v~~~d~----~~----w~~~~gp~g---~~~~~i~ed~~~~~i~ 94 (156) T 2qpv_A 26 MQSRIIHLSVEKPWAEVYDFAANPGNMPRWAAGLAGGLEADG----ED----WIAKGGPLG---EVRVNFAPHNEFGVID 94 (156) T ss_dssp CCEEEEEEEESSCHHHHHHHHHCGGGGGGTCGGGTTCCEEET----TE----EEEECSSSC---EEEEEECCCCSSCBCC T ss_pred CCCEEEEEEECCCHHHHHHHHHCHHHHHHHHHHCCEEEECCC----CC----EEEECCCCC---EEEEEEEECCCCCEEE T ss_conf 452699999769999999998795551789862140465277----74----798017986---2899999769895998 Q ss_pred EEECCCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 987263100000135775256897179999998624762489999999999999999999999997 Q T0583 81 VKYIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRADQ 146 (152) Q Consensus 81 ~~~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~ 146 (152) +....+. ...+.+.|++.++|++|+|.+++ |.+++.+...+... ...+++-++.||..+|+ T Consensus 95 w~~~~~~--~~~g~v~fr~~p~G~GTeV~~t~-~~~pg~~~~~~~~~--~~~v~~dL~rlK~llEA 155 (156) T 2qpv_A 95 HVVTLPD--GLKVYNALRVTPNGSGTEVSFTL-LRLEGMTDEDFEQD--ASAITADLEMLKSLLEA 155 (156) T ss_dssp EEEECTT--SCEEEEEEEEEEETTEEEEEEEE-ECCTTCCHHHHHHH--HHHHHHHHHHHHHHHHC T ss_pred EEEECCC--CCEEEEEEEECCCCCCEEEEEEE-ECCCCCCHHHHHHH--HHHHHHHHHHHHHHHCC T ss_conf 9954599--97899999988599948999998-64999857888989--99999999999998517 No 11 >3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, ABA, ABA sensor, drought tolerance, plant development, SEED dormancy; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3k90_A* 3jrq_B* 3kdj_A* Probab=99.34 E-value=4.3e-11 Score=88.73 Aligned_cols=143 Identities=11% Similarity=0.021 Sum_probs=96.8 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECC Q ss_conf 99986599899999986076325540441057998401589841899997303674110456667872576189998726 Q T0583 6 TARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIIDVKYID 85 (152) Q Consensus 6 ~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~~~ 85 (152) ....|+|||++||++|.||++..+|.|.++++++.+..+++.|....+.+.-+ .+-....+-....++....+.++.++ T Consensus 54 ~~q~I~AP~~~VW~lV~dF~~~~~W~P~V~sc~l~~G~~~~vGsvR~ltl~sG-~pa~ts~ERL~~lDd~~~~lsY~IIe 132 (211) T 3k3k_A 54 HAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTRDVIVISG-LPANTSTERLDILDDERRVTGFSIIG 132 (211) T ss_dssp EEEEESSCHHHHHHHHTCTTCGGGTCSSEEEEECCTTCCCCTTCEEEEEESSS-SSCEEEEEEEEEEETTTTEEEEEEEE T ss_pred EEEEECCCHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCCCEEEEEEEECC-CCCCEEEEEEEEECCCCCEEEEEEEC T ss_conf 13663599999988874549987878735368986388888531899997447-77746899997686768889999966 Q ss_pred CC--CHHHEEEEEEEECCCCC--EEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 31--00000135775256897--179999998624762489999999999999999999999997348 Q T0583 86 GP--FRYLDNRWTFRPTDGGA--QCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRADQIYG 149 (152) Q Consensus 86 g~--f~~~~g~w~~~p~~~~~--~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~~~g 149 (152) |+ ++.+....++.|..+++ +|.|.....++++-+.-..-...|++.+++.-+.++++.+|++.- T Consensus 133 gdlpl~nY~StitV~p~~~~g~~~T~V~eSy~vDvpeG~t~edt~~fv~~vv~~nL~~La~~aE~~~~ 200 (211) T 3k3k_A 133 GEHRLTNYKSVTTVHRFEKENRIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEAMAR 200 (211) T ss_dssp ETTGGGTCEEEEEEEEEEETTEEEEEEEEEEEEECCSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHT T ss_pred CCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 88761036899999852269986599999998347999877889999999999779999999999987 No 12 >3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid; HET: A8S; 2.05A {Arabidopsis thaliana} Probab=99.26 E-value=7e-10 Score=81.06 Aligned_cols=142 Identities=10% Similarity=0.045 Sum_probs=101.1 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECC Q ss_conf 99986599899999986076325540441057998401589841899997303674110456667872576189998726 Q T0583 6 TARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIIDVKYID 85 (152) Q Consensus 6 ~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~~~ 85 (152) ....|+|||++||++|.||++...|+|.++++++....+++.|....+.+.-+..+ ....+-....++....+.+..++ T Consensus 58 ~~~~I~AP~~~VW~~V~dF~~~~~W~P~V~sc~l~~g~~~~vGsvR~v~l~sG~pa-~~i~ErL~~iDd~~~~~sY~Iie 136 (208) T 3jrs_A 58 LAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTRDVNVISGLPA-NTSRERLDLLDDDRRVTGFSITG 136 (208) T ss_dssp EEEEESSCHHHHHHHHTCTTCGGGTCTTEEEEECCTTCCCSTTCEEEEEECTTSSC-CEEEEEEEEEETTTTEEEEEEEE T ss_pred EEEEECCCHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCCCEEEEEEEECCCCC-EEEEEEEEEECCCCCEEEEEEEC T ss_conf 68884499999988875559988878756469987488887403999995057784-68998876455425889999966 Q ss_pred CC--CHHHEEEEEEEECCCCCE-----EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 31--000001357752568971-----7999999862476248999999999999999999999999734 Q T0583 86 GP--FRYLDNRWTFRPTDGGAQ-----CDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRADQIY 148 (152) Q Consensus 86 g~--f~~~~g~w~~~p~~~~~~-----t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~~~ 148 (152) |+ ++.+...-++.|.+++.. |.+......+++-+.-..-+..+++.+++.-++++++-+|++. T Consensus 137 gdlpv~~Y~Sti~V~~~~~g~~~~~~~t~v~~sy~vD~P~G~t~E~~~~fv~~vv~~nLq~La~~~E~~~ 206 (208) T 3jrs_A 137 GEHRLRNYKSVTTVHRFEKEEEEERIWTVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKLASITEAMN 206 (208) T ss_dssp SSSSCTTCEEEEEEEEEEC-----CEEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHTC T ss_pred CCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 8865211588999986788652231139999815766899977899999999999998999999988753 No 13 >3kdh_A PYL2, putative uncharacterized protein AT2G26040; hormone receptor; 1.65A {Arabidopsis thaliana} PDB: 3kdi_A* Probab=99.21 E-value=5.4e-09 Score=75.47 Aligned_cols=140 Identities=9% Similarity=0.057 Sum_probs=96.7 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECC Q ss_conf 99986599899999986076325540441057998401589841899997303674110456667872576189998726 Q T0583 6 TARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIIDVKYID 85 (152) Q Consensus 6 ~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~~~ 85 (152) ...+|+|||++||+++.||++...|.|.++++++++.+ ++.|......+.-+.. .....+.....++..+.+.+..++ T Consensus 39 v~~~I~AP~~~VW~~v~dF~~~~~w~P~V~sc~l~~Gd-g~vGsvR~l~~~~G~p-~~~v~ErL~~~Dd~~~~~~Y~iie 116 (190) T 3kdh_A 39 ITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGD-GDVGSVREVTVISGLP-ASTSTERLEFVDDDHRVLSFRVVG 116 (190) T ss_dssp EEEEESSCHHHHHHHHHCTTCGGGTCSSEEEEEEEESS-SSTTCEEEEEECSSSC-CEEEEEEEEEEETTTTEEEEEECS T ss_pred EEEEECCCHHHHHHHHHCCCCHHHCCCCCCEEEEECCC-CCCCEEEEEEEEECCC-CCEEEEEEEEECCCCCEEEEEEEC T ss_conf 68885199999999886639977877745369986378-9986699999970368-607999999896778889999974 Q ss_pred CC--CHHHEEEEEEEECCCCC----EEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 31--00000135775256897----1799999986247624899999999999999999999999973 Q T0583 86 GP--FRYLDNRWTFRPTDGGA----QCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRADQI 147 (152) Q Consensus 86 g~--f~~~~g~w~~~p~~~~~----~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~~ 147 (152) |+ ++.+...-++.|..++. .|.+......+++-+--.--...|++.+++.-++++++-||++ T Consensus 117 gd~~l~~Y~Sti~V~~~~d~~~~~~~T~v~~S~~vD~p~g~t~e~~~~fv~~v~~~nL~~L~~~~e~~ 184 (190) T 3kdh_A 117 GEHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSA 184 (190) T ss_dssp CCSSSCSCEEEEEEEEECCCSSSCCEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHS T ss_pred CCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 73221689999999974788777545999998971489997758899999999982469999998755 No 14 >2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A* Probab=99.12 E-value=6e-09 Score=75.15 Aligned_cols=136 Identities=16% Similarity=0.214 Sum_probs=88.2 Q ss_pred CEEEEEEEECCCHHHHHHHH-HHHHHH-HHHCCCCCEE-EEEEECCCCCCEEEEEEEEECCCCCCEEEEEEE-EEECCCE Q ss_conf 80889998659989999998-607632-5540441057-998401589841899997303674110456667-8725761 Q T0583 2 PQFTTARRARHRAEQMFALV-ADVEKY-PQFLPMCEAL-SIRSRKERDGKTLLIADMTVGYKLIRETFTSQV-LLKPDEN 77 (152) Q Consensus 2 ~~i~~~~~i~ap~e~V~~vi-~D~e~y-~~f~p~~~~~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~ 77 (152) .++..+..|++||++||+++ .|+.++ |+|+|.+.++ ++++. +++.|....+. ...++-......++ ..++.++ T Consensus 3 ~~~~~e~~i~~~~e~vw~~~~~d~~~l~pk~~P~~~~sve~~eg-dg~~Gsvr~i~--~~~~~~~~~~kErl~~~D~~~~ 79 (155) T 2flh_A 3 KEFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEG-DGGVGTILIFN--FLPEVSPSYQREEITEFDESSH 79 (155) T ss_dssp EEEEEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEEC-SSSTTCEEEEE--ECTTSSSCEEEEEEEEEETTTT T ss_pred EEEEEEEEECCCHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECC-CCCCCEEEEEE--ECCCCCCCEEEEEEEEECHHHC T ss_conf 68999999338999999987514022040237651119999668-89998799999--7159987347999999925158 Q ss_pred EEEEEECCC-----CCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 899987263-----1000001357752568971799999986247624899999999999999999999 Q T0583 78 IIDVKYIDG-----PFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFE 141 (152) Q Consensus 78 ~i~~~~~~g-----~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~ 141 (152) .+.+...+| +++.+..+..+.|..+ ++|.|+++.+|++.++..-.......+.....++++++ T Consensus 80 ~~~Y~iieg~~~~~~~~~y~~ti~v~~~~~-g~~~v~w~~~f~~~~~~~~~~~~~~~~~~~~~~~kalE 147 (155) T 2flh_A 80 EIGLQVIEGGYLSQGLSYYKTTFKLSEIEE-DKTLVNVKISYDHDSDIEEKVTPTKTSQSTLMYLRRLE 147 (155) T ss_dssp EEEEEEEEEGGGGTTCSEEEEEEEEEEEET-TEEEEEEEEEEEC-------CCHHHHHHHHHHHHHHHH T ss_pred EEEEEEECCCCCCCCEEEEEEEEEEEECCC-CCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 899999817755634166789999998899-95799999999989998878105677888999999999 No 15 >1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2 Probab=99.09 E-value=1.8e-08 Score=72.13 Aligned_cols=142 Identities=13% Similarity=0.192 Sum_probs=99.1 Q ss_pred EEEEEEECCCHHHHHH-HHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEEC-CC-CCC-EEEEEEEEE--ECCCE Q ss_conf 8899986599899999-986076325540441057998401589841899997303-67-411-045666787--25761 Q T0583 4 FTTARRARHRAEQMFA-LVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVG-YK-LIR-ETFTSQVLL--KPDEN 77 (152) Q Consensus 4 i~~~~~i~ap~e~V~~-vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~-~~-~~~-~~~~~~v~~--~~~~~ 77 (152) +.....|++|+++||+ ++.|.+.+++|.|.|.++++|++-+++. .+.+..... .. .++ ..++....+ .++.. T Consensus 68 ~k~~~~i~~~~~~v~~~l~~d~e~~~~Wd~~~~~~~vle~i~~~t--~i~y~~~~~~~~~~vs~RDfv~~r~~~~~~d~~ 145 (229) T 1em2_A 68 FILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNT--LISYDVSAGAAGGVVSPRDFVNVRRIERRRDRY 145 (229) T ss_dssp EEEEEEESSCHHHHHHHTTTCHHHHTTTCTTEEEEEEEEEETTTE--EEEEEEECCBTTTTBCCEEEEEEEEEEECSSEE T ss_pred EEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHEEEEEEECCCCC--EEEEEEECCCCCCCCCCCEEEEEEEEEECCCEE T ss_conf 999999928999999999869688988874444099999818992--799999746589867787899999999869839 Q ss_pred EEEEEECCCC--------C--HHHEEEEEEEECCCC-CEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8999872631--------0--000013577525689-7179999998624762489999999999999999999999997 Q T0583 78 IIDVKYIDGP--------F--RYLDNRWTFRPTDGG-AQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRADQ 146 (152) Q Consensus 78 ~i~~~~~~g~--------f--~~~~g~w~~~p~~~~-~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~ 146 (152) .+...+...+ . ....+.|.|+|.+++ ..|.|++.+..+|++.++..++++++....-.++.++.+++.+ T Consensus 146 vi~~~sv~~~~~p~~~~~VR~~~~~~~~~i~p~~~~~~~t~vt~~~~~Dp~G~iP~~lvn~~~~~~~~~~~~~Lrk~~~~ 225 (229) T 1em2_A 146 LSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLRQRISE 225 (229) T ss_dssp EEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEEECEECCSSSCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_pred EEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99998513676788898389899657899998899998089999998178987779999999988699999999999999 Q ss_pred H Q ss_conf 3 Q T0583 147 I 147 (152) Q Consensus 147 ~ 147 (152) + T Consensus 226 ~ 226 (229) T 1em2_A 226 L 226 (229) T ss_dssp T T ss_pred H T ss_conf 7 No 16 >2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A* Probab=99.05 E-value=7.4e-09 Score=74.58 Aligned_cols=114 Identities=18% Similarity=0.291 Sum_probs=82.2 Q ss_pred CEEEEEEEECCCHHHHHHHHHHHHH---HHHHCCCC-CEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEE-EECCC Q ss_conf 8088999865998999999860763---25540441-0579984015898418999973036741104566678-72576 Q T0583 2 PQFTTARRARHRAEQMFALVADVEK---YPQFLPMC-EALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVL-LKPDE 76 (152) Q Consensus 2 ~~i~~~~~i~ap~e~V~~vi~D~e~---y~~f~p~~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~ 76 (152) ..+++.+.|+|||+.||+++.+++. +|+++|.. +++++ + .+++.|... .++..-++-...+..++. .++.+ T Consensus 29 k~v~~EieI~apAdkvW~v~~~~d~~~llPk~~P~~i~svev-e-GDGg~GtIr--~~~f~~g~~~~~~KErld~iD~en 104 (201) T 2vq5_A 29 KVIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEI-I-GDGGVGTIL--DMTFVPGEFPHEYKEKFILVDNEH 104 (201) T ss_dssp EEEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEE-E-SSSSTTCEE--EEECCTTCSSCEEEEEEEEEETTT T ss_pred EEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHCCCCEEEEEE-E-ECCCCCEEE--EEEECCCCCCEEEEEEEEEEECCC T ss_conf 999999995599999999860577401211447111218999-9-469998899--999878998458999999981423 Q ss_pred EEEEEEECCCC-----CHHHEEEEEEEECCCCCEEEEEEEEEEECCCHH Q ss_conf 18999872631-----000001357752568971799999986247624 Q T0583 77 NIIDVKYIDGP-----FRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT 120 (152) Q Consensus 77 ~~i~~~~~~g~-----f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l 120 (152) +.+.+..++|. ++.+..+..|.|.++ ++|.++++.+|++++.. T Consensus 105 ~~~~YsvIEGd~L~~~~~sy~~~ikv~p~~~-gg~vvk~t~eYe~k~e~ 152 (201) T 2vq5_A 105 RLKKVQMIEGGYLDLGVTYYMDTIHVVPTGK-DSCVIKSSTEYHVKPEF 152 (201) T ss_dssp TEEEEEEEEEGGGGTTEEEEEEEEEEEEEET-TEEEEEEEEEEEECGGG T ss_pred CEEEEEEECCCCCCCCEEEEEEEEEEEECCC-CCEEEEEEEEEEECCCC T ss_conf 6999999825655334469999999998899-96799999999999976 No 17 >1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI, protein structure initiative; 2.10A {Chromobacterium violaceum atcc 12472} SCOP: d.129.3.5 Probab=98.90 E-value=1e-07 Score=67.42 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=70.8 Q ss_pred CC-EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEE Q ss_conf 98-08899986599899999986076325540441057998401589841899997303674110456667872576189 Q T0583 1 MP-QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENII 79 (152) Q Consensus 1 M~-~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i 79 (152) || +|+.++.|+|||++||+.++|.+++.+|+++-.........+-..+............+.......+++...+++++ T Consensus 1 M~~~i~v~r~i~ap~e~Vw~a~tdp~~~~~W~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~~g~~~~~~g~v~~~~p~~rl 80 (147) T 1z94_A 1 MPNTIRLHRVLSAPPERVYRAFLDPLALAKWLPPEGFVCKVLEHDARVGGAYKMEFLAFASGQKHAFGGRYLELVPGERI 80 (147) T ss_dssp -CCCEEEEEEESSCHHHHHHHTTCHHHHHHHSSCTTEEEEEEEECCSTTCEEEEEEEETTTCCEEEEEEEEEEEETTTEE T ss_pred CCCEEEEEEEECCCHHHHHHHHCCHHHHCEECCCCCCEEEEEEECCEECEEEEEEEECCCCCCEEEEEEEEEECCCCEEE T ss_conf 99779999997899999999863977840040799824446665336640789998307999633589999971799899 Q ss_pred EEEE--CCCC-CHHHEEEEEEEECCCCCEEEEEEEEEE Q ss_conf 9987--2631-000001357752568971799999986 Q T0583 80 DVKY--IDGP-FRYLDNRWTFRPTDGGAQCDVEFFIDY 114 (152) Q Consensus 80 ~~~~--~~g~-f~~~~g~w~~~p~~~~~~t~v~~~v~~ 114 (152) .+.. .++. -.....+|+|++.+ ++|+|+++.+- T Consensus 81 ~~~~~~~~~~~~~~~~v~~~l~~~~--~gT~l~~~~~~ 116 (147) T 1z94_A 81 RYTDRFDDAGLPGDMITTITLAPLS--CGADLSIVQEG 116 (147) T ss_dssp EEEEEESCCC---CEEEEEEEEEET--TEEEEEEEEEC T ss_pred EEEEECCCCCCCCCEEEEEEEEECC--CCEEEEEEEEC T ss_conf 9998305888887679999999849--99899999965 No 18 >1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2 Probab=98.89 E-value=1.2e-07 Score=66.83 Aligned_cols=141 Identities=11% Similarity=0.106 Sum_probs=94.2 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEEC-CCC-C-CEEEEEEEEE-ECCCEE Q ss_conf 08899986599899999986076325540441057998401589841899997303-674-1-1045666787-257618 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVG-YKL-I-RETFTSQVLL-KPDENI 78 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~-~~~-~-~~~~~~~v~~-~~~~~~ 78 (152) .+.....|++|+++|++++.|.+.+++|.+.|.+++++++-+++. .+......+ ..+ + ...++..... ..+... T Consensus 68 ~~k~~~~i~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~~~~~~--~i~~~~~~~~~~~~v~~RD~v~~~~~~~~~~~~ 145 (224) T 1jss_A 68 LYKAQGVMDDVVNNVIDHIRPGPWRLDWDRLMTSLDVLEHFEENC--CVMRYTTAGQLLNIISPREFVDFSYTVGYEEGL 145 (224) T ss_dssp EEEEEEEESSCHHHHHHHHSSSTTHHHHCSSEEEEEEEEECSTTE--EEEEEEECCBTTTTBCCEEEEEEEEEEEETTEE T ss_pred EEEEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHEEEEEECCCCC--EEEEEEECCCCCCCCCCCEEEEEEEEEECCCCE T ss_conf 999999990899999999869587888888886506866428993--999999745588876765499999999759948 Q ss_pred EEE-EEC------CCCCH--HHEEEEEEEECCCC-CEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999-872------63100--00013577525689-717999999862476248999999999999999999999999 Q T0583 79 IDV-KYI------DGPFR--YLDNRWTFRPTDGG-AQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRAD 145 (152) Q Consensus 79 i~~-~~~------~g~f~--~~~g~w~~~p~~~~-~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~ 145 (152) +.. ... .+-.| .+.+.|.|+|.+++ +.|++++.+..++++.+++.+++.++....-+.+..+.++.+ T Consensus 146 v~~~~~~~~~p~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~D~~G~iP~~lvn~~~~~~~~~~~~~Lr~~~~ 222 (224) T 1jss_A 146 LSCGVSVEWSETRPEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLRGMIPQSAVDTAMASTLANFYSDLRKGLR 222 (224) T ss_dssp EEEEEECCCCCCCTTSEECEECSEEEEEEEETTEEEEEEEEEEECEECCSCCCHHHHHHHHHHHHHHHHHHHHHHTC T ss_pred EEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99998426789998858989963358999878999828999999717898775999999999879999999999973 No 19 >2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} Probab=98.89 E-value=1e-08 Score=73.74 Aligned_cols=115 Identities=15% Similarity=0.247 Sum_probs=84.1 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHH-HHHHCCC-CCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEE-EECCCEEE Q ss_conf 088999865998999999860763-2554044-10579984015898418999973036741104566678-72576189 Q T0583 3 QFTTARRARHRAEQMFALVADVEK-YPQFLPM-CEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVL-LKPDENII 79 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~-y~~f~p~-~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~i 79 (152) +++.++.|++||+++|+++.|+.+ +|+|+|. ++++++++.++++.+......+.. ++-..++..++. .++.+..+ T Consensus 18 kv~~ev~i~~pa~k~w~~~~~~~~llpk~~P~~i~siei~eGdg~~~Gsvr~~~~~~--~g~~~~~kErl~~iD~~~~~~ 95 (166) T 2i9y_A 18 KLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVH--DGEAKVAKERIEAVEPDKNLI 95 (166) T ss_dssp EEEEEEEESSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEE--TTEEEEEEEEEEEEETTTTEE T ss_pred EEEEEEEECCCHHHHHHHHCCCHHHCCHHCCCCCCEEEEECCCCCCCCCEEEEEEEC--CCCCEEEEEEEEEECCCCCEE T ss_conf 999999936899999999717411200226130438999858999986489999835--998359999999996300889 Q ss_pred EEEECCCC----CHHHEEEEEEEECCCCCEEEEEEEEEEECCCH Q ss_conf 99872631----00000135775256897179999998624762 Q T0583 80 DVKYIDGP----FRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSR 119 (152) Q Consensus 80 ~~~~~~g~----f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~ 119 (152) .+...+|+ ++.+....++.|.+++++|.++++++|+..+. T Consensus 96 ~Y~vieGd~~~~~~~~~~ti~v~~~~~~g~~~v~Wt~~ye~~~~ 139 (166) T 2i9y_A 96 TFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISE 139 (166) T ss_dssp EEEECCTTGGGTEEEEEEEEEEEEEEETTEEEEEEEEEEEESST T ss_pred EEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEECCC T ss_conf 99998475777602699999996248999827999999985899 No 20 >2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A Probab=98.86 E-value=4.1e-07 Score=63.53 Aligned_cols=115 Identities=17% Similarity=0.119 Sum_probs=82.0 Q ss_pred CEEEEEEEECCCHHHHHHH-HHHHHH-HHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEE-EECCCEE Q ss_conf 8088999865998999999-860763-255404410579984015898418999973036741104566678-7257618 Q T0583 2 PQFTTARRARHRAEQMFAL-VADVEK-YPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVL-LKPDENI 78 (152) Q Consensus 2 ~~i~~~~~i~ap~e~V~~v-i~D~e~-y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~ 78 (152) .+++..+.+++||+++|.. +.|..+ +|+++|.+.++.-++.+ .+-|+... ++..-++-..+...++. .++.+.. T Consensus 4 ~~~~~e~~~~v~a~k~~ka~~~d~~~l~Pk~~P~~~~s~~veGd-g~~GsIr~--~~~~~g~~~~~~keri~~iD~~~~~ 80 (154) T 2vjg_A 4 QSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEVKGD-GGAGTVRI--ITLPEGSPITTMTVRTDAVNKEALS 80 (154) T ss_dssp CEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEEESS-SSTTCEEE--EECCTTCSCCEEEEEEEEEETTTTE T ss_pred EEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECC-CCCCEEEE--EEECCCCCCEEEEEEEEEECCCCCE T ss_conf 49999996158989999988734243474237754107999889-99984999--9988998517899999999363359 Q ss_pred EEEEECCCC-----CHHHEEEEEEEECCCCCEEEEEEEEEEECCCHH Q ss_conf 999872631-----000001357752568971799999986247624 Q T0583 79 IDVKYIDGP-----FRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT 120 (152) Q Consensus 79 i~~~~~~g~-----f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l 120 (152) +.+...+|. ++++..+..+.|.++ ++|.++++.+|+..+.. T Consensus 81 ~~y~viEGd~l~~~~~s~~~~~~v~~~~~-gg~vvkwt~~y~~~~~~ 126 (154) T 2vjg_A 81 YDSTVIDGDILLGFIESIETHMVVVPTAD-GGSITKTTAIFHTKGDA 126 (154) T ss_dssp EEEEEEESGGGTTTEEEEEEEEEEEECTT-SCEEEEEEEEEEESTTC T ss_pred EEEEEEECCCCCCCEEEEEEEEEEEECCC-CCEEEEEEEEEEECCCC T ss_conf 99999944445535699999999965799-95699999999989999 No 21 >1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A* Probab=98.80 E-value=1.3e-06 Score=60.35 Aligned_cols=115 Identities=10% Similarity=0.013 Sum_probs=80.9 Q ss_pred EEEEEEEECCCHHHHHH-HHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEE-EECCCEEEE Q ss_conf 08899986599899999-9860763255404410579984015898418999973036741104566678-725761899 Q T0583 3 QFTTARRARHRAEQMFA-LVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVL-LKPDENIID 80 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~-vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~i~ 80 (152) +++..+.+++||+++|. ++.|+.++|.++|..-++..+...+.+.++...+.+.. ++-..+...++. .++.+..+. T Consensus 4 ~~~~E~~~~v~a~k~~ka~~~d~~~l~~~~P~~i~s~e~~eGdg~~Gsir~~~~~~--g~~~~~~KErie~iD~~~~~~~ 81 (157) T 1tw0_A 4 VFRDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNGGVGTIKKITANE--GDKTSFVLQKVDAIDEANLGYD 81 (157) T ss_dssp EEEEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSSSTTCEEEEEEEE--TTEEEEEEEEEEEEETTTTEEE T ss_pred EEEEEEECCCCHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEECC--CCCCCEEEEEEEEECCCCCEEE T ss_conf 88876761689899888443064017610700276406863799968599999736--8765401899999846345899 Q ss_pred EEECCCC-----CHHHEEEEEEEECCCCCEEEEEEEEEEECCCHH Q ss_conf 9872631-----000001357752568971799999986247624 Q T0583 81 VKYIDGP-----FRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT 120 (152) Q Consensus 81 ~~~~~g~-----f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l 120 (152) +...+|. ++++..+-.+.|..+ ++|.++++.+|+..+.. T Consensus 82 y~viEGd~l~~~~~~~~~~~~~~~~~~-g~svvkwt~~ye~~~~~ 125 (157) T 1tw0_A 82 YSIVGGTGLPESLEKLSFETKVVAGSG-GGSISKVTLKFHTKGDA 125 (157) T ss_dssp EEEEECTTSCTTEEEEEEEEEEEECSS-SSEEEEEEEEEEESTTC T ss_pred EEEEECCCCCCCEEEEEEEEEEEECCC-CCEEEEEEEEEEECCCC T ss_conf 999804546532589999999961699-96289999999988999 No 22 >1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5 Probab=98.78 E-value=1.6e-06 Score=59.75 Aligned_cols=111 Identities=10% Similarity=-0.012 Sum_probs=68.3 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC--EEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 088999865998999999860763255404410--579984015898418999973036741104566678725761899 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCE--ALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~--~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) .|..++.|+||+++||+.++|.+.+++|+.+-. ....--....++.. ...+... .|........++...+++++. T Consensus 23 ~i~v~r~i~Ap~e~Vw~a~tdpe~l~~W~~p~~~~~~~~~~d~~~GG~~--~~~~~~~-~G~~~~~~~~v~ei~pp~rl~ 99 (178) T 1xuv_A 23 EIIITREFDAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFEPKNGGSW--QYIQKDP-EGNEYAFHGVNHDVTEPERII 99 (178) T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHTTTCSSTTCEEEEEEECCSTTCEE--EEEEECT-TSCEEEEEEEEEEEETTTEEE T ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEEEECCCEE--EEEEECC-CCCEEEEEEEEEEECCCCEEE T ss_conf 7999999689999999997498998530289993623677862118559--9999737-897035799999835997899 Q ss_pred E--EECCC--CCHHHEEEEEEEECCCCCEEEEEEEEEEECC Q ss_conf 9--87263--1000001357752568971799999986247 Q T0583 81 V--KYIDG--PFRYLDNRWTFRPTDGGAQCDVEFFIDYEFK 117 (152) Q Consensus 81 ~--~~~~g--~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~ 117 (152) + ...+. ........++|++.++ ++|++++...|..+ T Consensus 100 ~tw~~~~~~~~~~~s~v~~~f~~~~~-g~t~~~~~~~~~~~ 139 (178) T 1xuv_A 100 STFEFEGLPEKGHVILDTARFEALPG-DRTKLTSHSVFQTI 139 (178) T ss_dssp EEEEETTSSSSCCCEEEEEEEEEETT-TEEEEEEEEECSSH T ss_pred EEEECCCCCCCCCCEEEEEEEECCCC-CCEEEEEEECCCCH T ss_conf 99851678888864799999852689-85899999628998 No 23 >2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A* Probab=98.77 E-value=2.9e-06 Score=58.15 Aligned_cols=143 Identities=6% Similarity=0.088 Sum_probs=91.7 Q ss_pred EEEEEEEE-CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEE-------- Q ss_conf 08899986-599899999986076325540441057998401589841899997303674110456667872-------- Q T0583 3 QFTTARRA-RHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLK-------- 73 (152) Q Consensus 3 ~i~~~~~i-~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-------- 73 (152) .+.....| ++|++++++++.|.+.+++|.+.|.++++++..+++. ..+.......+..-...++...... T Consensus 74 ~~K~~~~v~~~~~~~~~~~l~D~~~r~~Wd~~~~~~~~ie~~~~~~-~i~y~~~~~p~p~s~RD~v~~~~~~~~~~~~~~ 152 (255) T 2e3n_A 74 PLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLADNA-IIIYQTHKRVWPASQRDVLYLSVIRKIPALTEN 152 (255) T ss_dssp CEEEEEEEETCCHHHHHHHHHCGGGHHHHCCSEEEEEEEEEEETTE-EEEEEEECCCTTSCCEEEEEEEEEEEECCSSTT T ss_pred EEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHEEEEEEEECCCC-EEEEEEEECCCCCCCCCEEEEEEEEECCCCCCC T ss_conf 9999999919999999999859778999998764499999808996-699999742778677526999899970455326 Q ss_pred CCCE-EEEEEECCCC--------C--HHHEEEEEEEECC----------CCCEEEEEEEEEEECCCHHHHHHHHHHHHHH Q ss_conf 5761-8999872631--------0--0000135775256----------8971799999986247624899999999999 Q T0583 74 PDEN-IIDVKYIDGP--------F--RYLDNRWTFRPTD----------GGAQCDVEFFIDYEFKSRTLGLLMGTMFDLA 132 (152) Q Consensus 74 ~~~~-~i~~~~~~g~--------f--~~~~g~w~~~p~~----------~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~ 132 (152) .++. .+.....+.+ . ....+.|.++++. ++.+|++++....++++.++..+++.+++.. T Consensus 153 ~~~~~vi~~~sv~~~~~P~~~~~VR~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~v~~~~~~Dp~G~IP~~lvN~~~~~~ 232 (255) T 2e3n_A 153 DPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYVANVNPGGWAPASVLRAVAKRE 232 (255) T ss_dssp SCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CCCCCCGGGEEEEEEEEEEEECSSCCCHHHHHHHHHHH T ss_pred CCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHH T ss_conf 89989999980148768988992898877316999993057765555578995899999972779866399999999987 Q ss_pred HHHHHHHHHHHHHH Q ss_conf 99999999999997 Q T0583 133 FKKFSEAFEKRADQ 146 (152) Q Consensus 133 ~~~~~~af~~Ra~~ 146 (152) ...+++.|.+-++. T Consensus 233 ~p~~l~~l~~~~~~ 246 (255) T 2e3n_A 233 YPKFLKRFTSYVQE 246 (255) T ss_dssp HHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHH T ss_conf 89999999999985 No 24 >1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, alpha-beta protein, PSI; 1.70A {Nitrosomonas europaea atcc 19718} SCOP: d.129.3.5 Probab=98.70 E-value=2.5e-06 Score=58.53 Aligned_cols=139 Identities=10% Similarity=-0.014 Sum_probs=80.0 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCC-CEEEEEEEC-CCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 08899986599899999986076325540441-057998401-5898418999973036741104566678725761899 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMC-EALSIRSRK-ERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~-~~~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) .|..++.|+||+++||+.++|.+.+.+|+.+- -.+....-+ ..|+. ....+... .+........+....++.++. T Consensus 11 ~i~i~r~i~Ap~e~Vw~a~tdpe~l~~W~~p~~~~~~~~~~d~~~GG~--~~~~~~~~-~g~~~~~~g~v~ei~p~~rl~ 87 (178) T 1xfs_A 11 DLMLKRELAVPVNLVWRGLTEPELLKKWFVPKPWSISDCRVDLRPGGE--FYTVMQDP-EGNKFPNSGCFLEVTDEKRLI 87 (178) T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHTTTSSCTTCEEEEEEECCSTTCE--EEEEEECT-TCCEEEEEEEEEEEETTTEEE T ss_pred EEEEEEEECCCHHHHHHHHCCHHHHCCCCCCCCCCCEEEECCEECCCE--EEEEEECC-CCCEEEEEEEEEECCCCEEEE T ss_conf 899999967999999999759889725566899512563211024963--89977479-997767789999816866999 Q ss_pred EEEC----------------CCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9872----------------631000001357752568971799999986247624899999999999999999999999 Q T0583 81 VKYI----------------DGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRA 144 (152) Q Consensus 81 ~~~~----------------~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra 144 (152) +... ....-.....|+|++.+ ++|+|++...+..... ............-+.+++.+++-+ T Consensus 88 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~--~gT~lt~~~~~~~~~~-~~~~~~~~~~~GW~~~l~~L~~~l 164 (178) T 1xfs_A 88 WTSALVKNYRPAVPATTSDKECAHIVMTAVIELQPTS--SGTRYTACAMHNTPGQ-RKLHEEMGFHEGWGTTITQLEELL 164 (178) T ss_dssp EESSEEGGGEECCC-----------CCEEEEEEEECS--SSEEEEEEEECSSHHH-HHHHHTTTHHHHHHHHHHHHHHHH T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC--CCEEEEEEEECCCHHH-HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9984056657565555556677887579999999739--9389999997478314-889998779989999999999999 Q ss_pred HHH Q ss_conf 973 Q T0583 145 DQI 147 (152) Q Consensus 145 ~~~ 147 (152) ++. T Consensus 165 e~~ 167 (178) T 1xfs_A 165 KQE 167 (178) T ss_dssp HHH T ss_pred HHC T ss_conf 738 No 25 >2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural genomics, structural genomics consortium, SGC; 2.50A {Homo sapiens} Probab=98.68 E-value=4.2e-06 Score=57.18 Aligned_cols=143 Identities=14% Similarity=0.144 Sum_probs=97.7 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHH--HHHHCCCCCEEEEEEECCCCCCEEEEEEEEEC-CCC-C-CEEEEEEEEEE--CC Q ss_conf 088999865998999999860763--25540441057998401589841899997303-674-1-10456667872--57 Q T0583 3 QFTTARRARHRAEQMFALVADVEK--YPQFLPMCEALSIRSRKERDGKTLLIADMTVG-YKL-I-RETFTSQVLLK--PD 75 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~--y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~-~~~-~-~~~~~~~v~~~--~~ 75 (152) .+.....|++|+++|++++.|... -++|.+.+.++++|++-+++. .+....... ..+ + ...++....+. ++ T Consensus 68 ~~K~~~~i~~~~~~v~~~l~d~~~~~R~~Wd~~~~~~~vie~~d~~~--~i~~~~~~~~~~~~vs~RDfv~~~~~~~~~~ 145 (231) T 2r55_A 68 LYRGEGIVYGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTL--CVSRTSTPSAAMKLISPRDFVDLVLVKRYED 145 (231) T ss_dssp EEEEEEEESSCHHHHHHHHCC--CCSHHHHCTTCSEEEEEEECSSSE--EEEEEECCCBTTTTBCCEEEEEEEEEEECTT T ss_pred EEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCE--EEEEEEECCCCCCCCCCCEEEEEEEEEECCC T ss_conf 99999999089999999986041678988603175199999908990--8999996456778767751999999998489 Q ss_pred CEE-EEEEECC--------CCCHH--HEEEEEEEECCC-CCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 618-9998726--------31000--001357752568-97179999998624762489999999999999999999999 Q T0583 76 ENI-IDVKYID--------GPFRY--LDNRWTFRPTDG-GAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKR 143 (152) Q Consensus 76 ~~~-i~~~~~~--------g~f~~--~~g~w~~~p~~~-~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~R 143 (152) ... +...+++ |-.|. +.+.|.|+|.++ ++.|.+++....+|++.++..+++.++....-+.++.+.+. T Consensus 146 ~~~~i~~~Sv~~~~~p~~~~~VR~~~~~sg~~i~p~~~~~~~~~v~~~~~~Dp~G~iP~~lvn~~~~~~~~~~~~~Lrk~ 225 (231) T 2r55_A 146 GTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSFFPRSMTRFYANLQKA 225 (231) T ss_dssp SCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEEECEECCSSCCHHHHHHHHHHHHHHHHHHHHHH T ss_pred CEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 89999888602788887788299999600699999779998499999997278976649999999998799999999999 Q ss_pred HHHH Q ss_conf 9973 Q T0583 144 ADQI 147 (152) Q Consensus 144 a~~~ 147 (152) +++. T Consensus 226 ~kky 229 (231) T 2r55_A 226 VKQF 229 (231) T ss_dssp HHGG T ss_pred HHHH T ss_conf 9974 No 26 >2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR- 10 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A Probab=98.66 E-value=4e-06 Score=57.31 Aligned_cols=116 Identities=10% Similarity=0.081 Sum_probs=83.6 Q ss_pred CC--EEEEEEEECCCHHHHHH-HHHHHHHH-HHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEE-EECC Q ss_conf 98--08899986599899999-98607632-55404410579984015898418999973036741104566678-7257 Q T0583 1 MP--QFTTARRARHRAEQMFA-LVADVEKY-PQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVL-LKPD 75 (152) Q Consensus 1 M~--~i~~~~~i~ap~e~V~~-vi~D~e~y-~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 75 (152) |- +++..+.+.+||+.+|. ++.|..++ |.+.+.++++++++.++ +.|+...+.+.. ++-......++. .++. T Consensus 1 Mgv~~~~~E~~~~v~a~k~~ka~~~d~~~l~pk~p~~i~sve~~eGdg-g~GsIr~~~~~~--g~~~~~~KErve~iD~~ 77 (158) T 2qim_A 1 MGVFTFQDEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNG-GPGTIKKLTFIE--GGESKYVLHKIEAIDEA 77 (158) T ss_dssp -CEEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSS-STTCEEEEEEEE--TTEEEEEEEEEEEEEGG T ss_pred CCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHCCCEEECCCC-CCCEEEEEEECC--CCCCEEEEEEEEEEECC T ss_conf 997799877860379999999887453322510244513524760899-988099999858--99836999999988077 Q ss_pred CEEEEEEECCCC-----CHHHEEEEEEEECCCCCEEEEEEEEEEECCCHH Q ss_conf 618999872631-----000001357752568971799999986247624 Q T0583 76 ENIIDVKYIDGP-----FRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT 120 (152) Q Consensus 76 ~~~i~~~~~~g~-----f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l 120 (152) +..+.+..++|. ++.+..+-.|.|.++ ++|.++++++|++.+.. T Consensus 78 ~~~~~y~viEGd~l~~~~~~~~~~~k~~~~~~-ggsvvkwt~~ye~~~~~ 126 (158) T 2qim_A 78 NLGYNYSIVGGVGLPDTIEKISFETKLVEGAN-GGSIGKVTIKIETKGDA 126 (158) T ss_dssp GTEEEEEEEEESSCCCSEEEEEEEEEEEECST-TCEEEEEEEEEEESTTC T ss_pred CCEEEEEEEECCCCCCCEEEEEEEEEEECCCC-CCEEEEEEEEEEECCCC T ss_conf 65899999944545454699999999852799-97799999999999998 No 27 >3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens} Probab=98.63 E-value=3.5e-06 Score=57.62 Aligned_cols=132 Identities=13% Similarity=0.141 Sum_probs=84.2 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEEC-C-CCC-CEEEEEEEEEE---CC- Q ss_conf 08899986599899999986076325540441057998401589841899997303-6-741-10456667872---57- Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVG-Y-KLI-RETFTSQVLLK---PD- 75 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~v~~~---~~- 75 (152) .+.....|++|+++||+++.|.+.+++|.+.+.+++++++-+++.. +. ..... . +.+ ...++...... ++ T Consensus 89 ~fK~e~~Vd~p~~~v~~vL~D~~~R~~WD~~~~~~~vIe~id~~~~--I~-y~~~~~~~~pvs~RDfV~~~s~r~~~~~~ 165 (258) T 3fo5_A 89 SFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDA--IY-HVTSPALGGHTKPQDFVILASRRKPCDNG 165 (258) T ss_dssp EEEEEEEESSCHHHHHHHHHCGGGGGGTCTTCCEEEEEEEEETTEE--EE-EEEECCCTTCSSCEEEEEEEEEECCSSTT T ss_pred EEEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHEEEEEEEECCCCE--EE-EEEECCCCCCCCCCEEEEEEEEEEECCCC T ss_conf 9999999758999999988597763344663220899999179968--99-99916788766773799999999855999 Q ss_pred -CEEEEEEECCCC--------CH--HHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHH-HHHHHHHHHH Q ss_conf -618999872631--------00--0001357752568971799999986247624899999999-9999999999 Q T0583 76 -ENIIDVKYIDGP--------FR--YLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMF-DLAFKKFSEA 139 (152) Q Consensus 76 -~~~i~~~~~~g~--------f~--~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~-~~~~~~~~~a 139 (152) ...+...+++.| .| ...+.|.++|.++ +.|+|+|....++ +.++..+++... .....++..| T Consensus 166 ~~yvv~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~p~~~-~~t~vtY~~q~dp-G~iP~~~~n~~g~~~~i~~~~~a 239 (258) T 3fo5_A 166 DPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGD-QLTKVSYYNQATP-GVLNYVTTNVAGLSSEFYTTFKA 239 (258) T ss_dssp CCEEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEET-TEEEEEEEESCCG-GGHHHHHHHHHTSCCHHHHHHHH T ss_pred CEEEEEEECCCCCCCCCCCCCEEEEEECCEEEEEECCC-CCEEEEEEEECCC-CCCCCEEEEHHCCHHHHHHHHHH T ss_conf 87999996364788999999387787144799998999-9679999981499-87641156522261789999999 No 28 >3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5 Probab=98.61 E-value=4.2e-06 Score=57.16 Aligned_cols=114 Identities=14% Similarity=0.040 Sum_probs=64.8 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC--CCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEE Q ss_conf 9808899986599899999986076325540441057998401--58984189999730367411045666787257618 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRK--ERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENI 78 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 78 (152) |..+..++.|+|||++||+.++|.+.+.+|+..-......... +-..+......+. ...+.......+++...++++ T Consensus 1 M~ei~~~r~i~ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~~~d~~~GG~~~~~~~-~~~g~~~~~~g~v~~~~p~~r 79 (152) T 3eli_A 1 MADLRLEREFAVAPEALFAWVSDGAKLLQWWGPEGLHVPADQHDLDFTRLGPWFSVMV-NGEGQRYKVSGQVTHVKPPQS 79 (152) T ss_dssp -CEEEEEEEESSCHHHHHHHTTCHHHHHHHCSSTTCBCCTTSBCCCCSSSEEEEEEEE-CTTCCEEEEEEEEEEEETTTE T ss_pred CCEEEEEEEECCCHHHHHHHHCCHHHHCEEECCCCCCCCCEEEEECCCCCCEEEEEEE-CCCCCEEEEEEEEEEECCCCE T ss_conf 9739999998499999999863976731574789843321457882526952999998-899967778999999858988 Q ss_pred EEEEE----CCCC-CHHHEEEEEEEECCCCCEEEEEEEEEEECCC Q ss_conf 99987----2631-0000013577525689717999999862476 Q T0583 79 IDVKY----IDGP-FRYLDNRWTFRPTDGGAQCDVEFFIDYEFKS 118 (152) Q Consensus 79 i~~~~----~~g~-f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~ 118 (152) +.+.- .++. .....-.|+|++. +++|+|+++.. .++. T Consensus 80 l~~tw~~~~~~~~~~~~~~v~~~l~~~--~~gT~l~l~~~-~~~~ 121 (152) T 3eli_A 80 VGFTWGWHDDDDRRGAESHVMFIVEPC--AKGARLILDHR-ELGD 121 (152) T ss_dssp EEEEEEEECTTSCEEEEEEEEEECCBC----CEEEEEEEE-SCSC T ss_pred EEEEEEECCCCCCCCCCEEEEEEEEEC--CCCEEEEEEEE-CCCC T ss_conf 999986067888889738999999987--99799999998-5899 No 29 >1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A* Probab=98.60 E-value=7.6e-06 Score=55.50 Aligned_cols=140 Identities=6% Similarity=0.050 Sum_probs=92.3 Q ss_pred EEEEEEEEC-CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEE--EEECCC--E Q ss_conf 088999865-99899999986076325540441057998401589841899997303674110456667--872576--1 Q T0583 3 QFTTARRAR-HRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQV--LLKPDE--N 77 (152) Q Consensus 3 ~i~~~~~i~-ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~--~ 77 (152) .+.....|+ +|++++++++.|.+++++|.+.+.+ +++..+.+. ..+.......+..-...+.... ...++. . T Consensus 53 ~~k~~~~i~~~~~~~v~~~l~d~~~~~~Wd~~~~~--~~e~~~~~~-~i~y~~~~~p~p~~~RD~v~~~~~~~~~~~~~~ 129 (214) T 1ln1_A 53 EYKVFGVLEDCSPTLLADIYMDSDYRKQWDQYVKE--LYEQECNGE-TVVYWEVKYPFPMSNRDYVYLRQRRDLDMEGRK 129 (214) T ss_dssp EEEEEEEETTSCHHHHHHHHHCHHHHHHHCTTEEE--EEEEEETTE-EEEEEEECCCTTSCCEEEEEEEEEEEECSTTCC T ss_pred EEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHH--EEEECCCCC-EEEEEEECCCCCCCCEEEEEEEEEEECCCCCCC T ss_conf 99999999389999999998485678889887651--389857995-899999316776776069999999982677771 Q ss_pred --EEEEEECC--------CC--CHHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf --89998726--------31--0000013577525689717999999862476248999999999999999999999999 Q T0583 78 --IIDVKYID--------GP--FRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRAD 145 (152) Q Consensus 78 --~i~~~~~~--------g~--f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~ 145 (152) .+.....+ |. ...+.+.|.|+|.++ ++|+|++.+..+|++.++..+++.+.......++..+.+.|+ T Consensus 130 ~~~~~~~s~~~~~~p~~~~~vR~~~~~~~~~i~~~~~-~~t~v~~~~~~Dp~G~iP~~lvn~~~~~~~~~~~~~l~~~~~ 208 (214) T 1ln1_A 130 IHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGK-KGSKVFMYYFDNPGGQIPSWLINWAAKNGVPNFLKDMARACQ 208 (214) T ss_dssp EEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSS-SSEEEEEEEEECCSSCCCHHHHHHHHHTHHHHHHHHHHHHHH T ss_pred EEEEEEECCCCCCCCCCCCCEECCEEEEEEEEEECCC-CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 6999973255777887899660753546799997799-969999999759898576999999999879999999999997 Q ss_pred H Q ss_conf 7 Q T0583 146 Q 146 (152) Q Consensus 146 ~ 146 (152) . T Consensus 209 k 209 (214) T 1ln1_A 209 N 209 (214) T ss_dssp T T ss_pred H T ss_conf 1 No 30 >1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A Probab=98.60 E-value=9.1e-06 Score=55.04 Aligned_cols=113 Identities=12% Similarity=0.134 Sum_probs=80.9 Q ss_pred EEEEEEEECCCHHHHHHH-HHHHHHH-HHHCCC-CCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEE-EECCCEE Q ss_conf 088999865998999999-8607632-554044-10579984015898418999973036741104566678-7257618 Q T0583 3 QFTTARRARHRAEQMFAL-VADVEKY-PQFLPM-CEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVL-LKPDENI 78 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~v-i~D~e~y-~~f~p~-~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~ 78 (152) +++..+.++.||+++|.+ +.|..++ |+++|. ++++++++.+ .+.|+...+ +.+-++-......++. .++.++. T Consensus 4 t~~~E~~~~vpa~k~~k~~~~d~~~l~Pk~~P~~i~~ie~~eGd-g~~GsIr~~--~~~~g~~~~~~KErie~iD~en~~ 80 (159) T 1e09_A 4 TYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGD-GGPGTIKKI--TFGEGSQYGYVKHKIDSIDKENYS 80 (159) T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESS-SSTTCEEEE--EECCSSSCEEEEEEEEEEETTTTE T ss_pred EEEEEEEECCCHHHHHHHHHHCCCCCCCHHCCHHEEEEEEECCC-CCCCCEEEE--EECCCCCCEEEEEEEEEECCCCCE T ss_conf 99887760579899999886360101720250130389898788-999829999--987899753899999998154368 Q ss_pred EEEEECCCCC-----HHHEEEEEEEECCCCCEEEEEEEEEEECCCH Q ss_conf 9998726310-----0000135775256897179999998624762 Q T0583 79 IDVKYIDGPF-----RYLDNRWTFRPTDGGAQCDVEFFIDYEFKSR 119 (152) Q Consensus 79 i~~~~~~g~f-----~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~ 119 (152) +.+..++|.. +++..+-.|.|.++ ++|.++++++|+..+. T Consensus 81 ~~y~viEGd~l~~~~~s~~~~~~~~~~~~-~gsv~k~t~eYe~~~~ 125 (159) T 1e09_A 81 YSYTLIEGDALGDTLEKISYETKLVASPS-GGSIIKSTSHYHTKGN 125 (159) T ss_dssp EEEEECCCTTTGGGEEEEEEEEEECCCTT-SSEEEEEEEEEEECSS T ss_pred EEEEEEECCCCCCCEEEEEEEEEEEECCC-CCEEEEEEEEEEECCC T ss_conf 99999955435473689999999997699-9789999999998999 No 31 >1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, bacillus halodurans protein BH1534; NMR {Bacillus halodurans c-125} SCOP: d.129.3.5 Probab=98.55 E-value=1.8e-06 Score=59.55 Aligned_cols=96 Identities=7% Similarity=0.043 Sum_probs=66.6 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 98088999865998999999860763255404410579984015898418999973036741104566678725761899 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) ||.|+.++.|+|||++||++++|.+.+++|++.+.. ....+..+... ...+ ....+++...++.++. T Consensus 4 ~~~i~~~~~i~Appe~Vw~alt~p~~~~~W~~~~~~-------~~~~G~~~~~~--~~~g----~~~~~v~~~~p~~~i~ 70 (146) T 1xn5_A 4 LPDIKKEVRFNAPIEKVWEAVSTSEGLAFWFMENDL-------KAETGHHFHLQ--SPFG----PSPCQVTDVERPIKLS 70 (146) T ss_dssp CCCEEEEEEESSCHHHHHHHTTSHHHHHTTSCCBCC-------CSCTTCEEEEE--CSSC----EEEEEEEEEETTTEEE T ss_pred CCEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCC-------CCCCCEEEEEE--CCCC----CCCEEEEEEECCCEEE T ss_conf 974999999779999999998196677653424665-------44465289864--3666----5567999982693899 Q ss_pred EEECCCCCHHHEEEEEEEECCCCCEEEEEEEEEE Q ss_conf 9872631000001357752568971799999986 Q T0583 81 VKYIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDY 114 (152) Q Consensus 81 ~~~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~ 114 (152) +....+ ....+|+|+|.+ ++|+|+++..- T Consensus 71 ~~~~~~---~~~v~~~l~~~~--~gT~lt~t~~g 99 (146) T 1xn5_A 71 FTWDTD---GWSVTFHLKEEE--NGTIFTIVHSG 99 (146) T ss_dssp EEETTT---TEEEEEEEEECS--SSEEEEEEEEC T ss_pred EEECCC---CCEEEEEEEECC--CCEEEEEEEEC T ss_conf 998589---948999999849--97899999936 No 32 >2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, protein structure initiative, midwest center for structural genomics; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5 Probab=98.53 E-value=2.5e-05 Score=52.27 Aligned_cols=111 Identities=5% Similarity=-0.080 Sum_probs=66.6 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC-EEEEEE-ECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 088999865998999999860763255404410-579984-015898418999973036741104566678725761899 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCE-ALSIRS-RKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~-~~~vl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) .|+.++.++|||++||+.++|.+.+.+|+++.. .+.... ....|+... ..+. +..+........++...++.++. T Consensus 15 ~i~i~r~~~ap~e~Vw~a~T~pe~l~~W~~p~~~~~~~~~~d~~~GG~~~--~~~~-~~~g~~~~~~g~~~ev~p~~rl~ 91 (171) T 2il5_A 15 EVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYR--IVDQ-QRNGKVNVIEGIYESLVMDEYVK 91 (171) T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHTTTSSSCTTTEEEEEECCSTTCEEE--EEEE-CGGGCEEEEEEEEEEEETTTEEE T ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEEEECCCEEE--EEEE-CCCCCEEEEEEEEEEECCCCEEE T ss_conf 99999997799999999974989980275799952267888510386057--7887-79997888889999953997899 Q ss_pred EEEC--CCCCHHHEEEEEEEECCCCCEEEEEEEEEEECC Q ss_conf 9872--631000001357752568971799999986247 Q T0583 81 VKYI--DGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFK 117 (152) Q Consensus 81 ~~~~--~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~ 117 (152) +... +.+-......+.|.+.. +++|+|++..+.-+. T Consensus 92 ~t~~~~~~~~~~~~~~~~~~~~~-~ggT~lt~~~~~~~~ 129 (171) T 2il5_A 92 MTIGMPGLSETQDVIEVEFFERE-TGGTQMLFYYRSLVE 129 (171) T ss_dssp EEESCC--CCCCEEEEEEEEECS-SSSEEEEEEEEEEEC T ss_pred EEEECCCCCCCCEEEEEEEEECC-CCCEEEEEEEEECCC T ss_conf 99852688999639999999758-997999999981480 No 33 >1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5 Probab=98.47 E-value=1.7e-06 Score=59.64 Aligned_cols=96 Identities=6% Similarity=0.085 Sum_probs=65.3 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 98088999865998999999860763255404410579984015898418999973036741104566678725761899 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) |+.|..++.|+|||++||+.++|.+.+.+|++.+. . +...|+ .+ .+....+. ...+++...+++++. T Consensus 7 ~~~i~~~~~i~ap~e~Vw~alTdp~~~~~W~~~~~-~----~~~~Gg--~~--~~~~~~g~----~~g~v~~~~p~~~l~ 73 (143) T 1xn6_A 7 LNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPND-F----VLEVGH--EF--HVQSPFGP----SPCKVLEIDEPNHLS 73 (143) T ss_dssp CCCEEEEEEESSCHHHHHHTTSCSHHHHTTSCCBC-C----CCCTTC--EE--CBCCTTCC----CCEEEEEEETTTEEE T ss_pred CCEEEEEEEECCCHHHHHHHHCCHHHHCEEEECCC-C----CCCCCE--EE--EEEECCCC----EEEEEEEEECCCEEE T ss_conf 98699999989999999998729666134743467-7----512225--89--99510451----008999980796899 Q ss_pred EEECCCCCHHHEEEEEEEECCCCCEEEEEEEEE Q ss_conf 987263100000135775256897179999998 Q T0583 81 VKYIDGPFRYLDNRWTFRPTDGGAQCDVEFFID 113 (152) Q Consensus 81 ~~~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~ 113 (152) +.-..+ ...-+|+|+|.++ ++|+|+++.. T Consensus 74 ~tw~~~---~~~v~~~l~~~~~-G~T~l~~~h~ 102 (143) T 1xn6_A 74 FSWDTD---GWVVSFDLKDLGD-NKTEFTLIHG 102 (143) T ss_dssp EEETTT---TEEEEEEEEEEET-TEEEEEEEEE T ss_pred EEECCC---CCEEEEEEEECCC-CCEEEEEEEC T ss_conf 998699---9589999996689-9499999983 No 34 >3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} Probab=98.42 E-value=5.2e-05 Score=50.24 Aligned_cols=113 Identities=8% Similarity=0.021 Sum_probs=78.8 Q ss_pred EEEEEEEECCCHHHHHHH-HHHHHHH-HHHCCCC-CEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEE-EECCCEE Q ss_conf 088999865998999999-8607632-5540441-0579984015898418999973036741104566678-7257618 Q T0583 3 QFTTARRARHRAEQMFAL-VADVEKY-PQFLPMC-EALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVL-LKPDENI 78 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~v-i~D~e~y-~~f~p~~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~ 78 (152) +++.......||+++|.. +.|..++ |+.+|.. +++++++.++ +-|+...+. ..-++-...+..++. .++.++. T Consensus 11 t~~~E~~~~v~a~klfka~~~d~~~l~Pk~~P~~i~sve~~eGDG-g~GSIk~~~--~~~g~~~~~~KErie~iD~en~~ 87 (165) T 3ie5_A 11 TIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDG-GVGTVTKIT--FVDGHPLTYMLHKFDEIDAANFY 87 (165) T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSS-STTCEEEEE--ECTTSSCCEEEEEEEEEEGGGTE T ss_pred EEEEEEEECCCHHHHHHHHHHCCCHHCHHHCCHHCEEEEEECCCC-CCCEEEEEE--ECCCCCCCEEEEEEEEEECCCCE T ss_conf 985558832698999987861420104024741215899986789-978199999--83798641668999998042268 Q ss_pred EEEEECCCCC-----HHHEEEEEEEECCCCCEEEEEEEEEEECCCHH Q ss_conf 9998726310-----00001357752568971799999986247624 Q T0583 79 IDVKYIDGPF-----RYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT 120 (152) Q Consensus 79 i~~~~~~g~f-----~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l 120 (152) +.+..++|.+ .++..+-.+.+ .+++|.++++++|+..+.. T Consensus 88 ~~y~viEGd~L~~~~~~~~~~~k~~~--~~ggsv~kwt~eYe~~~~~ 132 (165) T 3ie5_A 88 CKYTLFEGDVLRDNIEKVVYEVKLEA--VGGGSKGKITVTYHPKPGC 132 (165) T ss_dssp EEEEEEEEGGGTTTEEEEEEEEEEEE--ETTEEEEEEEEEEEECTTC T ss_pred EEEEEEECCCCCCCEEEEEEEEEEEC--CCCCEEEEEEEEEEECCCC T ss_conf 99999912205461899999999945--9996699999999988997 No 35 >2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, protein structure initiative; HET: MSE; 1.45A {Enterococcus faecalis V583} SCOP: d.129.3.5 Probab=98.42 E-value=4.8e-05 Score=50.43 Aligned_cols=97 Identities=14% Similarity=0.113 Sum_probs=65.1 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEE Q ss_conf 08899986599899999986076325540441057998401589841899997303674110456667872576189998 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIIDVK 82 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~ 82 (152) .|...+.|+||||+||+.|+|.+.+++|++...... ...|+ .+.... ..+ ....+|+...++.++.+. T Consensus 37 ~v~~eR~i~A~pE~VW~AlTdpe~l~~Wf~~~~~~d----~~~GG--~~~f~~--~~~----~~~~~V~e~epp~rL~~t 104 (184) T 2nn5_A 37 YFGTERAISASPQTIWRYLTETDKLKQWFPELEIGE----LGVNG--FWRFIL--PDF----EETMPFTDYAEEKYLGVT 104 (184) T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHHHHCTTEEEEE----CSTTC--EEEEEE--TTE----EEEEEEEEEETTTEEEEE T ss_pred EEEEEEECCCCHHHHHHHHCCHHHHHHCCCCCCCCC----CCCCC--EEEEEE--CCC----CEEEEEEEEECCCEEEEE T ss_conf 999999518999999999729478986189877656----66686--899980--699----735899998169789999 Q ss_pred ECCCCCHHHEEEEEEEECCCCCEEEEEEEEEEECC Q ss_conf 72631000001357752568971799999986247 Q T0583 83 YIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFK 117 (152) Q Consensus 83 ~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~ 117 (152) -..+ .-+|.|.|.. +++|+++++...-.. T Consensus 105 W~~~-----~v~feL~~~~-~~~T~L~l~h~~~~~ 133 (184) T 2nn5_A 105 WDTG-----IIYFDLKEQA-PHQTLLVFSESLPEN 133 (184) T ss_dssp ETTE-----EEEEEEEEEE-TTEEEEEEEEEECTT T ss_pred ECCC-----CEEEEEEECC-CCCEEEEEEEECCCC T ss_conf 8898-----1899999748-994999999955876 No 36 >2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown function, PSI-2; NMR {Bacillus subtilis subsp} Probab=98.39 E-value=1.4e-06 Score=60.16 Aligned_cols=95 Identities=6% Similarity=0.116 Sum_probs=64.1 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEE Q ss_conf 98088999865998999999860763255404410579984015898418999973036741104566678725761899 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIID 80 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~ 80 (152) ||.|..++.|+|||++||+.++|.+.+++|++.+.- +...|+. . .+....+. ....++...+++++. T Consensus 9 ~~~I~~~~~i~Ap~e~Vw~altdpe~l~~W~~~~~~-----~~~~Gg~--~--~~~~~~g~----~~g~v~~~~p~~~l~ 75 (152) T 2kew_A 9 LPDITKSITLEAPIQKVWETVSTSEGIAKWFMPNDF-----QLKEGQE--F--HLQSPFGP----SPCKVLAVQAPTELS 75 (152) T ss_dssp SCCEEEEEEECSCHHHHHHHSSSSHHHHHHHCSCCC-----CSCSSCC--B--CSSSSCCS----CCBEEEEEETTTEEE T ss_pred CCEEEEEEEECCCHHHHHHHHCCHHHHHHCCCCCCC-----CCCCCCE--E--EEEECCCC----EEEEEEEEECCCEEE T ss_conf 871999999829999999987087565022478875-----4565748--9--99824785----558999982797899 Q ss_pred EEECCCCCHHHEEEEEEEECCCCCEEEEEEEEE Q ss_conf 987263100000135775256897179999998 Q T0583 81 VKYIDGPFRYLDNRWTFRPTDGGAQCDVEFFID 113 (152) Q Consensus 81 ~~~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~ 113 (152) +.-..+. ..-+|+|+|.+ ++|+|+++.+ T Consensus 76 ~tw~~~~---~~vt~~l~~~~--~gT~ltl~h~ 103 (152) T 2kew_A 76 FEWDTEG---WVVTFQLEDLG--EKTGFTLIHS 103 (152) T ss_dssp EECTTSC---CEEEEEEECCS--SCEEEEEEEC T ss_pred EEECCCC---CEEEEEEEECC--CCEEEEEEEE T ss_conf 9976999---29999999779--9799999995 No 37 >2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5 Probab=98.14 E-value=1e-05 Score=54.73 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=63.9 Q ss_pred CEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECC------------CCCCEEEEEE Q ss_conf 8088999865998999999860763255404410579984015898418999973036------------7411045666 Q T0583 2 PQFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGY------------KLIRETFTSQ 69 (152) Q Consensus 2 ~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 69 (152) .++..++.|+||+++||+.++|.+.+.+|+.++.. ....|+ .+..+...+. .+.......+ T Consensus 19 ~tl~ieR~~~Ap~e~Vw~AlTdp~~l~~W~~p~~~-----~~~~Gg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 91 (191) T 2k5g_A 19 QSIRFERLLPGPIERVWAWLADADKRARWLAGGEL-----PRQPGQ--TFELHFNHAALTAETAPARYAQYDRPIVARHT 91 (191) T ss_dssp SSEEEEEEESSSSHHHHHHHHCHHHHTTTSCCCCC-----CSSTTC--EEEEEECGGGSCCSSCCSSCSGGGSCEEEEEE T ss_pred CEEEEEEEECCCHHHHHHHHHCHHHHHHHCCCCCC-----CCCCCC--EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEE T ss_conf 67999999679999999998195989854678874-----131287--89999736886521112111477863368899 Q ss_pred EEEECCCEEEEEEECCCC-CHHHEEEEEEEECCCCCEEEEEEEEEE Q ss_conf 787257618999872631-000001357752568971799999986 Q T0583 70 VLLKPDENIIDVKYIDGP-FRYLDNRWTFRPTDGGAQCDVEFFIDY 114 (152) Q Consensus 70 v~~~~~~~~i~~~~~~g~-f~~~~g~w~~~p~~~~~~t~v~~~v~~ 114 (152) ++...+++++.+....+. .....-+|+|++. +++|+++++... T Consensus 92 v~e~ep~~rL~~tw~~~~~~~~s~V~~~l~~~--g~gT~Ltlth~g 135 (191) T 2k5g_A 92 LLRCEPPRVLALTWGGGAGEAPSEVLFELSEA--GEQVRLVLTHTR 135 (191) T ss_dssp EEEEETTTEEEEECCCCSSSSCCEEEEEEEEC--SSSEEEEEEEEC T ss_pred EEEEECCCEEEEEEECCCCCCCEEEEEEEEEC--CCCEEEEEEEEC T ss_conf 99997684899996268898760567888634--993999999947 No 38 >1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A Probab=98.07 E-value=8.1e-05 Score=49.00 Aligned_cols=135 Identities=10% Similarity=0.067 Sum_probs=70.4 Q ss_pred CEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC------EEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECC Q ss_conf 8088999865998999999860763255404410------5799840158984189999730367411045666787257 Q T0583 2 PQFTTARRARHRAEQMFALVADVEKYPQFLPMCE------ALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPD 75 (152) Q Consensus 2 ~~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~------~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 75 (152) |.|.++++|+||++.||+.++| .+++|.|.-. .+.+. ...++ ... ..-. .+-.. ....+....+ T Consensus 4 p~v~~s~~i~Ap~e~Vf~a~te--~~~~Ww~~~~~~~~~~~~~~~--~~~gG--~~~--~~~~-dg~~~-~~g~v~ev~p 73 (155) T 1zxf_A 4 PFVRHSVTVKADRKTAFKTFLE--GFPEWWPNNFRTTKVGAPLGV--DKKGG--RWY--EIDE-QGEEH-TFGLIRKVDE 73 (155) T ss_dssp SCEEEEEEESSHHHHHHHHHTT--CSSSSSSGGGSTTTTCSSCEE--ETTTT--EEE--CCCT-TTSCC-CCEEEEEEET T ss_pred CEEEEEEEEECCHHHHHHHHHH--HHHHHCCCCCCCCCEEEEEEE--CCCCC--EEE--EECC-CCEEE-EEEEEEEEEC T ss_conf 8599999996999999999875--478665999866400347762--17872--499--9813-42036-5379999956 Q ss_pred CEEEEEEECCC------CCHHHEEEEEEEECCCCCEEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 61899987263------1000001357752568971799999986-247624899999999999999999999999973 Q T0583 76 ENIIDVKYIDG------PFRYLDNRWTFRPTDGGAQCDVEFFIDY-EFKSRTLGLLMGTMFDLAFKKFSEAFEKRADQI 147 (152) Q Consensus 76 ~~~i~~~~~~g------~f~~~~g~w~~~p~~~~~~t~v~~~v~~-e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~~~ 147 (152) +.++.+.-..+ +.....-+|.|++.. .++|+|+++.+. .....-...-+..-+...-..+++.+++.++.- T Consensus 74 ~~rl~~tw~~~~~~~~~~~~~~~v~~~~~~~~-~~~T~v~l~h~g~~~~~~~~~~~~~~~~~~GW~~~L~~L~~~le~~ 151 (155) T 1zxf_A 74 PDTLVIGWRLNGFGRIDPDNSSEFTVTFVADG-QKKTRVDVEHTHFDRMGTKHAKRVRNGMDKGWPTILQSFQDKIDEE 151 (155) T ss_dssp TTEEEEECCCSSSSSCCCSSCCCEEEEEEEET-TTEEEEEEEECSSTTSCHHHHHHHHHHHTTTHHHHHHHHHHHHHHH T ss_pred CCEEEEEEECCCCCCCCCCCCCEEEEEEEECC-CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 84899997117765655467750699998538-9967999999135766615689998667554999999999986030 No 39 >2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, structural genomics, structural genomics consortium; 2.80A {Homo sapiens} SCOP: d.129.3.2 Probab=97.86 E-value=0.0014 Score=41.17 Aligned_cols=126 Identities=6% Similarity=0.034 Sum_probs=78.7 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEEC--CC--EE Q ss_conf 088999865998999999860763255404410579984015898418999973036741104566678725--76--18 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKP--DE--NI 78 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~--~~ 78 (152) .+..+..|+|||++|++.+.+ .-++|.+.+.+++++++.+++. ..+..........-...++....+.. +. .. T Consensus 76 ~~K~~~~v~a~p~~Vl~~vl~--~R~~WD~~~~~~~vIe~ld~~~-~I~~~~~~~p~pv~~RDfV~lr~~r~~~~~g~~v 152 (237) T 2pso_A 76 LWKASVEVEAPPSVVLNRVLR--ERHLWDEDFVQWKVVETLDRQT-EIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCT 152 (237) T ss_dssp EEEEEEEESSCHHHHHHHHHH--CGGGTCTTBCCCEEEEEEETTE-EEEEEEECCSSSCCCEEEEEEEEEESCCGGGCEE T ss_pred EEEEEEEEECCHHHHHHHHHH--HHHHHHHHHHEEEEEEECCCCC-EEEEEEEECCCCCCCCEEEEEEEEEEECCCCEEE T ss_conf 999999992899999999988--8888876542499999928997-9999982368776872489999999968998799 Q ss_pred EEEEECCC---C----C--HHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHH Q ss_conf 99987263---1----0--00001357752568971799999986247624899999999999 Q T0583 79 IDVKYIDG---P----F--RYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLA 132 (152) Q Consensus 79 i~~~~~~g---~----f--~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~ 132 (152) +...+++. | . ..+.+.|.++|.++ +.|+|++....++++.++....+.+-..+ T Consensus 153 i~~~Sv~h~~~p~~~~VRa~~~~sg~lIep~~~-~~trvt~i~~vDpkG~iP~W~~~~~g~~~ 214 (237) T 2pso_A 153 LVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGS-GKSRLTHICRIDLKGHSPEWYSKGFGHLC 214 (237) T ss_dssp EEEEECCCTTCCCCSSEECCEEEEEEEEEECST-TCEEEEEEEEECCSSSCTTTTTTHHHHHH T ss_pred EEEEECCCCCCCCCCCEEEEEECCEEEEEECCC-CCEEEEEEEEECCCCCCHHHHHHHHHHHH T ss_conf 999967789899999399999715699999899-97899999997789867478987577899 No 40 >1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A Probab=97.71 E-value=0.00069 Score=43.13 Aligned_cols=86 Identities=10% Similarity=0.210 Sum_probs=62.6 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEE Q ss_conf 08899986599899999986076325540441057998401589841899997303674110456667872576189998 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENIIDVK 82 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~ 82 (152) .++..+.|++|++.+|+++.|+... |+.+.+ +++.. ..++.+..+.+. T Consensus 6 kl~~eveikapa~kf~~~~~~~~~~----~~~k~~-------------------------Kerve---~iD~e~~~ity~ 53 (122) T 1vjh_A 6 ALSVKFDVKCPADKFFSAFVEDTNR----PFEKNG-------------------------KTEIE---AVDLVKKTMTIQ 53 (122) T ss_dssp EEEEEEEESSCHHHHHHHHHHHTTS----CSSTTC-------------------------EEEEE---EEETTTTEEEEE T ss_pred EEEEEEEECCCHHHHHHHHHCCCCC----CCCCCC-------------------------EEEEE---EECCCCCEEEEE T ss_conf 8999998438889985553365678----866641-------------------------89999---997778889999 Q ss_pred ECCCC----CHHHEEEEEEEECCCCCEEEEEEEEEEECCCHH Q ss_conf 72631----000001357752568971799999986247624 Q T0583 83 YIDGP----FRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT 120 (152) Q Consensus 83 ~~~g~----f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l 120 (152) ..+|+ ++.+..+..+.|.++|.+|.++++.+|+..+.- T Consensus 54 vieGd~~~~y~s~~~~i~v~p~~dg~gs~vkwt~~yek~~~~ 95 (122) T 1vjh_A 54 MSGSEIQKYFKTLKGSIAVTPIGVGDGSHVVWTFHFEKVHKD 95 (122) T ss_dssp EECTTGGGTEEEEEEEEEEEECSSSSCEEEEEEEEEEESSTT T ss_pred EECCCCHHHEEEEEEEEEEEECCCCCCEEEEEEEEEEECCCC T ss_conf 986540101458899999997789995089999999978999 No 41 >1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5 Probab=97.24 E-value=0.0017 Score=40.63 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=59.4 Q ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEE--E Q ss_conf 08899986599899999986076325540441057998401589841899997303674110456667872576189--9 Q T0583 3 QFTTARRARHRAEQMFALVADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENII--D 80 (152) Q Consensus 3 ~i~~~~~i~ap~e~V~~vi~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i--~ 80 (152) +++.++.++||||+||+.++|.+.+.+|+...... ....++... ...+.+. .++....++.++ . T Consensus 12 ~i~~~~~f~ap~e~Vw~Alt~pe~l~~W~~~~~~~----d~~~GG~~~------~~~g~~~----G~~~ev~p~~rl~~t 77 (145) T 1x53_A 12 KITLKETFLTSPEELYRVFTTQELVQAFTHAPATL----EADRGGKFH------MVDGNVS----GEFTDLVPEKHIVMK 77 (145) T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHSCSCCBC----CCSTTCCCB------BTTTTEE----CCEEEEETTTEEEEE T ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCC----CCEECCEEE------EEEECCC----EEEEEECCCCEEEEE T ss_conf 99999997999999999973989973232455433----431142489------9960222----689998079889999 Q ss_pred EEECCCCC-HHHEEEEEEEECCCCCEEEEEEEEEEE Q ss_conf 98726310-000013577525689717999999862 Q T0583 81 VKYIDGPF-RYLDNRWTFRPTDGGAQCDVEFFIDYE 115 (152) Q Consensus 81 ~~~~~g~f-~~~~g~w~~~p~~~~~~t~v~~~v~~e 115 (152) |...+.+- ....-+|.|++.+ ++|+|+++...- T Consensus 78 w~~~~~~~~~~s~vt~~l~~~~--~~T~L~l~~~g~ 111 (145) T 1x53_A 78 WRFKSWPEGHFATITLTFIDKN--GETELCMEGRGI 111 (145) T ss_dssp EEETTSCTTCCEEEEEECCBCS--SCEEEEEEEEEE T ss_pred EEECCCCCCCCEEEEEEEEECC--CEEEEEEEEECC T ss_conf 8705677887579999999869--918999999789 No 42 >2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics, PSI, protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa PAO1} SCOP: d.129.3.7 Probab=94.88 E-value=0.19 Score=27.67 Aligned_cols=133 Identities=12% Similarity=0.034 Sum_probs=73.6 Q ss_pred EEEEEEEECCC---------HHHHHHH-HHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEE Q ss_conf 08899986599---------8999999-8607632554044105799840158984189999730367411045666787 Q T0583 3 QFTTARRARHR---------AEQMFAL-VADVEKYPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLL 72 (152) Q Consensus 3 ~i~~~~~i~ap---------~e~V~~v-i~D~e~y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 72 (152) .+++.+.|+-| .+|+|.- +...++--+|+|++.+++|+++.++ .+..++.++.+. +.-.+++ T Consensus 2 ~feHlv~IN~P~np~~p~LTr~QlW~GL~lrar~P~~Fvp~l~~c~V~~~~~~----~~~Rel~fg~~~----v~e~Vtl 73 (157) T 2ffs_A 2 QFEHLVQVNDRTLVDLPVLDRLQLWEGLVCRAREPQYFVVGLERFEILVDDGD----RLHRRLYLPGLV----VEDEVVL 73 (157) T ss_dssp CEEEEEECCCCCC---CCCCHHHHHHHHHHHHHCGGGTCTTCCEEEEEEECSS----EEEEEEEETTEE----EEEEEEE T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCC----EEEEEEEECCCE----EEEEEEE T ss_conf 61577851699998777558999998889845597572020446999971398----299999986864----6888997 Q ss_pred ECCCEEEEEEECC-CCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 2576189998726-31000001357752568971799999986247624-----8999999999999999999999999 Q T0583 73 KPDENIIDVKYID-GPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRT-----LGLLMGTMFDLAFKKFSEAFEKRAD 145 (152) Q Consensus 73 ~~~~~~i~~~~~~-g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l-----~~~~~~~~~~~~~~~~~~af~~Ra~ 145 (152) .++.+ +.+.... +....-.-.-.++. ++.+.-.++|.++...++.. .+-..+.......-..++-..+|.- T Consensus 74 ~~~~~-V~f~~~a~~~~~g~~l~~~Iee-pe~g~L~lrF~Ye~~~p~~~~~~~~~~e~~ksaY~~ad~dTvr~IRE~~~ 150 (157) T 2ffs_A 74 KAPDS-AHYSIKPSAEVAGGSLDMTIEE-PEPGSLFVRFAYCTRYLQPLGDELPYDAFVKQAYIAMDVETIATIRDRFG 150 (157) T ss_dssp ETTTE-EEEEECCCSSSBEEEEEEEEEE-EETTEEEEEEEEEEECSCC--CCCCCBHHHHHHHHHHHHHHHHHHHHHHC T ss_pred CCCCE-EEEECCCCCCCCCCEEEEEECC-CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 48848-9997256557788669999813-89970999999964899988433568999999999873999999999864 No 43 >2ejx_A ST0812; arcaea, unknown function, NPPSFA; 1.79A {Sulfolobus tokodaii str} Probab=82.38 E-value=2.3 Score=20.84 Aligned_cols=123 Identities=14% Similarity=0.181 Sum_probs=71.7 Q ss_pred CCEEEEEEEECCCHHHHHHHHHHHHH-HHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEE Q ss_conf 98088999865998999999860763-25540441057998401589841899997303674110456667872576189 Q T0583 1 MPQFTTARRARHRAEQMFALVADVEK-YPQFLPMCEALSIRSRKERDGKTLLIADMTVGYKLIRETFTSQVLLKPDENII 79 (152) Q Consensus 1 M~~i~~~~~i~ap~e~V~~vi~D~e~-y~~f~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i 79 (152) |-.++.++.-...+|.+-.+++|.+= .|+.+|++++....+ +....+.. .++.......-+|.--.+.-.. T Consensus 4 ~m~~~~~i~T~hD~eal~~ILSDP~F~ip~lfp~ik~~~~~~------~~~F~aeg--~~~~~~~~i~G~Vy~g~~~Vty 75 (139) T 2ejx_A 4 MMKVEKEIKTNQDIDVVMTIFSDPAFTIPQIFPGIASIKCIE------PEIFEAEG--KFLAFSYKVKGRVYKGVDEVRI 75 (139) T ss_dssp --CEEEEEECSSCHHHHHHHHTCHHHHHHHHSTTEEEEECCS------TTEEEEEE--EETTEEEEEEEEEEEETTEEEE T ss_pred EEEEEEEECCCCCHHHHHHHHCCCCEEEHHHCCCCEEEEECC------CCEEEEEE--ECCEEEEEEEEEEEECCCEEEE T ss_conf 389999706765888987646397547024254400036437------86105584--0040689998789962655999 Q ss_pred EEEECCCCCHHHEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 998726310000013577525689717999999862476248999999999999999999999999 Q T0583 80 DVKYIDGPFRYLDNRWTFRPTDGGAQCDVEFFIDYEFKSRTLGLLMGTMFDLAFKKFSEAFEKRAD 145 (152) Q Consensus 80 ~~~~~~g~f~~~~g~w~~~p~~~~~~t~v~~~v~~e~~~~l~~~~~~~~~~~~~~~~~~af~~Ra~ 145 (152) -+....|+ |.-++.+.+++ .+...++|+-+ +..+.+++ ..++=++.|+++++ T Consensus 76 ~~~~~~g~-----Gkl~i~~~~~~---~i~i~le~~g~---~~~l~~r~---~i~~~i~~f~~~ld 127 (139) T 2ejx_A 76 IYDSDRGN-----GILYIRKKDNN---TLQIILEHDNK---LTAFLGKP---YVSSNLDRLAENID 127 (139) T ss_dssp EEEETTEE-----EEEEEEEEETT---EEEEEEEESCH---HHHHHHHH---HHHHHHHHHHHHHH T ss_pred EEEECCCC-----CEEEEEECCCC---EEEEEEEEECE---EEEEECHH---HHHHHHHHHHHHHH T ss_conf 99944899-----78999984798---69999985010---43360177---89999999887666 Done!