Query T0588 ZP_02064699.1, Bacteroides ovatus ATCC 8483, 400 residues Match_columns 400 No_of_seqs 167 out of 251 Neff 7.4 Searched_HMMs 15564 Date Mon Jul 5 09:07:30 2010 Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0588.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0588.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1qaza_ a.102.3.1 (A:) Alginat 100.0 0 0 328.5 20.4 282 36-350 11-297 (351) 2 d1qaza_ a.102.3.1 (A:) Alginat 100.0 1.5E-43 0 293.3 22.7 253 100-371 65-322 (351) 3 d1hn0a1 a.102.3.2 (A:235-618) 92.2 0.32 2E-05 23.9 15.7 241 118-385 101-364 (384) 4 d2d5ja1 a.102.1.7 (A:1-377) Un 91.3 0.39 2.5E-05 23.3 18.2 180 129-341 51-259 (377) 5 d1x1ia1 a.102.3.2 (A:26-386) X 87.5 0.76 4.9E-05 21.5 22.0 236 30-336 2-265 (361) 6 d1f1sa1 a.102.3.2 (A:249-619) 83.9 1.1 7.4E-05 20.4 19.1 197 115-337 64-276 (371) 7 d1rwha1 a.102.3.2 (A:4-372) Ch 80.7 1.5 9.6E-05 19.6 22.8 242 29-336 3-274 (369) 8 d1fp3a_ a.102.1.3 (A:) N-acyl- 76.5 2 0.00013 18.8 15.9 33 119-151 121-153 (402) 9 d1n7oa1 a.102.3.2 (A:170-540) 75.1 2.2 0.00014 18.6 18.9 195 115-337 65-275 (371) 10 d1nc5a_ a.102.1.6 (A:) Hypothe 71.2 2.7 0.00017 18.0 14.8 24 129-152 40-63 (363) 11 d2h6fb1 a.102.4.3 (B:521-921) 64.0 3.7 0.00024 17.1 9.4 151 107-287 68-223 (401) 12 d1dl2a_ a.102.2.1 (A:) Class I 59.1 4.6 0.00029 16.5 3.4 27 126-152 179-205 (511) 13 d1x9da1 a.102.2.1 (A:245-697) 52.6 5.8 0.00037 15.9 12.1 141 119-264 151-305 (453) 14 d2afaa1 a.102.1.3 (A:4-415) Pu 51.2 6.1 0.00039 15.7 19.7 48 98-150 32-79 (411) 15 d1aa0a_ h.1.17.1 (A:) Fibritin 49.6 3 0.00019 17.7 1.1 12 95-106 94-105 (113) 16 d1x9da1 a.102.2.1 (A:245-697) 48.2 6.8 0.00044 15.4 5.5 131 119-258 151-298 (453) 17 d1hcua_ a.102.2.1 (A:) Class I 44.6 7.7 0.0005 15.1 10.4 26 127-152 177-202 (488) 18 d1nxca_ a.102.2.1 (A:) Class I 38.6 9.6 0.00061 14.5 11.1 33 118-150 103-135 (467) 19 d1w6ka1 a.102.4.2 (A:6-99,A:37 30.1 13 0.00084 13.6 12.8 142 192-353 253-410 (448) 20 d1clca1 a.102.1.2 (A:135-575) 21.0 19 0.0012 12.5 9.9 29 126-154 169-202 (441) 21 d1n4qb_ a.102.4.3 (B:) Protein 20.5 20 0.0013 12.5 5.1 63 183-255 152-217 (346) No 1 >d1qaza_ a.102.3.1 (A:) Alginate lyase A1-III {Sphingomonas sp., A1 [TaxId: 28214]} Probab=100.00 E-value=0 Score=328.49 Aligned_cols=282 Identities=21% Similarity=0.328 Sum_probs=241.4 Q ss_pred HHHHHCCCHHHHHHHHHHH--HHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC Q ss_conf 9985065158999999999--99985078850005443577776555342564447888888776621468-85177655 Q T0588 36 KEKADSPLYAPAVKTLLRD--ADKALKMTPPSVMDKTMTADSGDKHDYMSMGPYWWPDPSKPDGLPYIRKD-GQRNPELD 112 (400) Q Consensus 36 k~~~~~~~~~~a~~~L~~~--ad~~l~~~p~sV~~k~~~~~sg~~hdy~s~~py~wP~~~~~~g~py~~rd-g~~nP~~~ 112 (400) |....+.....+.+.++++ +|..|+.++-||+||+..++||.+|||++.+. +|||+| |++||+.. T Consensus 11 ~~~~~~~~~~~~~~~~l~~~~~d~~lk~~~~~~~d~~~~~~~~~~~~~m~~~~------------~~~~~~~g~~np~~~ 78 (351) T d1qaza_ 11 KDPTASYVDVKARRTFLQSGQLDDRLKAALPKEYDCTTEATPNPQQGEMVIPR------------RYLSGNHGPVNPDYE 78 (351) T ss_dssp CCTTCCSSCHHHHHHHHHSSCCCHHHHHHSCCCCCGGGCCCCCCCCSSCCCCC------------SBSSTTSSSBCTTHH T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCC------------CCCCCCCCCCCCCCC T ss_conf 03457711078999988643331354057721023556688876553133276------------555677777686400 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHH-HHHH Q ss_conf 334288999999999988888605888899999999998740531001455210013677777665413689898-9999 Q T0588 113 KLDRNKLGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLNVWFLDAKTKMNPHLTYGQTIPGKNKGMGRGAGMIDIY-SFTE 191 (400) Q Consensus 113 ~~d~~~l~~~~~a~~~LALaw~lTGd~~YA~kA~~iL~aW~~~~~T~mnP~l~yaq~~~g~~~~~g~~~gl~~~~-~~~~ 191 (400) ..+ +.+..|..++.+|+++|++||++.||++|+++|++|| +|+|.+.+.+.. +|.-.+. .+.. T Consensus 79 ~~~-~~~~d~~k~~~~L~~aY~~TG~~~yA~cAl~~L~aWA-----kadAll~~~~~~----------~g~~~~rw~l~~ 142 (351) T d1qaza_ 79 PVV-TLYRDFEKISATLGNLYVATGKPVYATCLLNMLDKWA-----KADALLNYDPKS----------QSWYQVEWSAAT 142 (351) T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHH-----HTTTTSSSCTTS----------HHHHHHHHHHHH T ss_pred CCC-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-----HCCHHCCCCCCC----------CHHHHHHHHHHH T ss_conf 011-6632389999999999986188899999999998884-----047100646675----------226778899999 Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf 99999999832798887899999999999999872313655344334310799999998888608999999999998762 Q T0588 192 MIDAMTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPVAAEEQRAKNNHGLAYDVQLTAYALYTGNQDLAMKTIQEFPEK 271 (400) Q Consensus 192 ~~~A~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~g~~~~~~~nNhg~~~~~~~~aia~~~~d~~l~~~ai~~~~~~ 271 (400) ++.+..+++..+++++++.+.+++||..+.+|+.. .+..+....|||+.|+..+++++|+++||.++++.++..|... T Consensus 143 ~a~al~~l~~~p~~~~~q~k~I~~Wf~r~a~~~s~--~~~~~~~~~NNH~yw~a~~v~a~gv~t~d~elf~~a~~~~~~a 220 (351) T d1qaza_ 143 AAFALSTMMAEPNVDTAQRERVVKWLNRVARHQTS--FPGGDTSCCNNHSYWRGQEATIIGVISKDDELFRWGLGRYVQA 220 (351) T ss_dssp HHHHHHTTTTCSSSCHHHHHHHHHHHHHHHHHHHT--SCCCTTTTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 99999986057898989999999999999998510--2465554226555689999999999847988999999999999 Q ss_pred HHHHHHHHHCCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 100222010120456404-5763035665999999999998528322213462554799999999986367886567222 Q T0588 272 RLFAQIEPDGKQPLELAR-TTALGYTIFNLGHMLDMCSIASTLGQDIYNATSQDGRSITAALKFLIPYIGKPQSEWPYQQ 350 (400) Q Consensus 272 ~l~~~i~~dG~q~~E~~R-~~~~~Y~~~~L~~l~~~a~~a~~~G~DL~~~~~~~g~~L~~a~ey~~~y~~~~~~~~p~~~ 350 (400) ..||.+||++|.|+.| ++++||+.|+|.+|+.+|+++++||+|||+|+ .+|++|.++++|++.++.+|+..++|.- T Consensus 221 --l~qi~~DGslP~E~~RG~rAl~Y~~~aL~~L~~iAeia~~qG~DLy~~~-~nG~~lh~~v~f~i~~~~np~~i~kya~ 297 (351) T d1qaza_ 221 --MGLINEDGSFVHEMTRHEQSLHYQNYAMLPLTMIAETASRQGIDLYAYK-ENGRDIHSARKFVFAAVKNPDLIKKYAS 297 (351) T ss_dssp --HTTBCTTSCBTTGGGSGGGHHHHHHHHHHHHHHHHHHHHTTTCCCTTCC-SSSCCHHHHHHHHHHHHHCGGGGGGTCC T ss_pred --HHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCHHHHHHHHHHHHHHHCHHHHHHHCC T ss_conf --9740601563687612545245656579999999999986596303212-0307899999988766615247675527 No 2 >d1qaza_ a.102.3.1 (A:) Alginate lyase A1-III {Sphingomonas sp., A1 [TaxId: 28214]} Probab=100.00 E-value=1.5e-43 Score=293.35 Aligned_cols=253 Identities=18% Similarity=0.258 Sum_probs=203.1 Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCC Q ss_conf 21468851776553342889999999999888886058888999999999987405310014552100136777776654 Q T0588 100 YIRKDGQRNPELDKLDRNKLGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLNVWFLDAKTKMNPHLTYGQTIPGKNKGMGR 179 (400) Q Consensus 100 y~~rdg~~nP~~~~~d~~~l~~~~~a~~~LALaw~lTGd~~YA~kA~~iL~aW~~~~~T~mnP~l~yaq~~~g~~~~~g~ 179 (400) |..-|+.+.......-++.+.++...|++|+++|++|||++||++|+++|++||.+.+ .|.++ . +. T Consensus 65 y~~~d~~~~~~~~e~~~~~~~d~~~~~~~L~~aY~~TGd~~YA~~Ai~~L~aWA~a~A-ll~~~-----------~--~~ 130 (351) T d1qaza_ 65 YLSGNHGPVNPDYEPVVTLYRDFEKISATLGNLYVATGKPVYATCLLNMLDKWAKADA-LLNYD-----------P--KS 130 (351) T ss_dssp BSSTTSSSBCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHTTT-TSSSC-----------T--TS T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC-CCCCC-----------C--CC T ss_conf 2578777778542156777777999999999999870989999999999999986376-23778-----------9--87 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH Q ss_conf 13689898999999999999832798887899999999999999872313655344334310799999998888608999 Q T0588 180 GAGMIDIYSFTEMIDAMTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPVAAEEQRAKNNHGLAYDVQLTAYALYTGNQD 259 (400) Q Consensus 180 ~~gl~~~~~~~~~~~A~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~g~~~~~~~nNhg~~~~~~~~aia~~~~d~~ 259 (400) ...+..++.+..++.|+++++.+++|++++.+.|++||..++.|+.++..+..+ ..|||++|...+++++|+++||.+ T Consensus 131 ~~~~~~~~~l~~~a~A~e~l~~~~~~~~~d~~~i~~Wf~~~~~~~~~~~~~~~~--~~nNH~~w~~~~v~aigv~~~d~~ 208 (351) T d1qaza_ 131 QSWYQVEWSAATAAFALSTMMAEPNVDTAQRERVVKWLNRVARHQTSFPGGDTS--CCNNHSYWRGQEATIIGVISKDDE 208 (351) T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCSSSCHHHHHHHHHHHHHHHHHHHTSCCCTTT--TTSHHHHHHHHHHHHHHHHTTCHH T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHHHHHHHHHCCCHH T ss_conf 239999999999999999984078999899999999999999997236245644--436799999999999999929999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHH Q ss_conf 999999998762100222010120456404-5763035665999999999998528322213462554799999999986 Q T0588 260 LAMKTIQEFPEKRLFAQIEPDGKQPLELAR-TTALGYTIFNLGHMLDMCSIASTLGQDIYNATSQDGRSITAALKFLIPY 338 (400) Q Consensus 260 l~~~ai~~~~~~~l~~~i~~dG~q~~E~~R-~~~~~Y~~~~L~~l~~~a~~a~~~G~DL~~~~~~~g~~L~~a~ey~~~y 338 (400) +++.++..++.. ..||.+||++|.|+.| ++++||+.|+|.+|+.+|+++++||+|||+|. .+|.+|.++++|++++ T Consensus 209 l~~~a~~~~~~~--l~qi~~DG~lp~E~~Rg~~a~~Y~~~al~~l~~iae~a~~~G~DL~~~~-~ng~~i~~~~~f~~~~ 285 (351) T d1qaza_ 209 LFRWGLGRYVQA--MGLINEDGSFVHEMTRHEQSLHYQNYAMLPLTMIAETASRQGIDLYAYK-ENGRDIHSARKFVFAA 285 (351) T ss_dssp HHHHHHHHHHHH--HTTBCTTSCBTTGGGSGGGHHHHHHHHHHHHHHHHHHHHTTTCCCTTCC-SSSCCHHHHHHHHHHH T ss_pred HHHHHHHHHHHH--HHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHH T ss_conf 999999999999--9853677888166502355720278899999999999996499743348-6627899999999988 Q ss_pred HCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHH Q ss_conf 3678865672224----44555415788999999851 Q T0588 339 IGKPQSEWPYQQI----KEWDKKQEEACWILRRASFF 371 (400) Q Consensus 339 ~~~~~~~~p~~~~----~~~~~~~~~~~~~~~~aa~~ 371 (400) +.+|+..+++... ..+...+....|+....++. T Consensus 286 ~~dp~~~~~~a~~~q~~~~~~~~~~~~~W~~~y~~r~ 322 (351) T d1qaza_ 286 VKNPDLIKKYASEPQDTRAFKPGRGDLNWIEYQRARF 322 (351) T ss_dssp HHCGGGGGGTCCSCCCCTTCSTTCGGGHHHHHHHHHH T ss_pred HHCHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHC T ss_conf 4280878753578771433557876550899999858 No 3 >d1hn0a1 a.102.3.2 (A:235-618) Chondroitin ABC lyase I {Proteus vulgaris [TaxId: 585]} Probab=92.21 E-value=0.32 Score=23.91 Aligned_cols=241 Identities=12% Similarity=0.086 Sum_probs=113.5 Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHH--HCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 89999999999888886058888999999999-987--405310014552100136777776654136898989999999 Q T0588 118 KLGDMSKAVTTLGLAYYFSGDEKYAQKAVDFL-NVW--FLDAKTKMNPHLTYGQTIPGKNKGMGRGAGMIDIYSFTEMID 194 (400) Q Consensus 118 ~l~~~~~a~~~LALaw~lTGd~~YA~kA~~iL-~aW--~~~~~T~mnP~l~yaq~~~g~~~~~g~~~gl~~~~~~~~~~~ 194 (400) .+..-......+|++|...|+..+-++..+.+ ..+ +.+ --..+ |.....+.|-+ +..-.+.+ T Consensus 101 ~~~~~~~~l~~lA~aY~~~g~~~~~~el~~~i~~~~d~l~d------Qg~~~-----gS~~~~~nww~----~~ir~~~~ 165 (384) T d1hn0a1 101 ILGNYTTLMFNISRAYVLEKDPTQKAQLKQMYLLMTKHLLD------QGFVK-----GSALVTTHHWG----YSSRWWYI 165 (384) T ss_dssp EHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH------TTCST-----TCCCSCCTTHH----HHHHHHHH T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH------HCEEC-----CCCCCCCCHHH----HHHHHHHH T ss_conf 89999999999999974788732239999999999999987------23203-----78777673112----23877988 Q ss_pred HHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH--HHHHHHHHCCCHHHHHHHHHHHHH- Q ss_conf 999998327988878-9999999999999987231365534433431079999--999888860899999999999876- Q T0588 195 AMTLMENSKAFTPKV-KKGMKEWFTQLVEWMQTSPVAAEEQRAKNNHGLAYDV--QLTAYALYTGNQDLAMKTIQEFPE- 270 (400) Q Consensus 195 A~~llr~~~~wt~~d-~~~~~~w~~~~~~wl~~s~~g~~~~~~~nNhg~~~~~--~~~aia~~~~d~~l~~~ai~~~~~- 270 (400) ++-||++. +.+.+ .+.+.+.++-|..-..+..... .....+|-..++.. ..++.++..+|.....+.+..+.. T Consensus 166 a~~Lm~d~--L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~n~D~~~t~~~~~l~~~Ll~~d~~e~i~~l~~l~~~ 242 (384) T d1hn0a1 166 STLLMSDA--LKEANLQTQVYDSLLWYSREFKSSFDMK-VSADSSDLDYFNTLSRQHLALLLLEPDDQKRINLVNTFSHY 242 (384) T ss_dssp HHHHTHHH--HHHTTCHHHHHHHHHHHGGGGHHHHTCC-CCTTTTCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHH T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH T ss_conf 99998775--3226789999999987446864245676-67785037899999999999998559919999999999999 Q ss_pred --H-------HHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCC Q ss_conf --2-------1002220101204564045763035665999999999998528322213462554799999999986367 Q T0588 271 --K-------RLFAQIEPDGKQPLELARTTALGYTIFNLGHMLDMCSIASTLGQDIYNATSQDGRSITAALKFLIPYIGK 341 (400) Q Consensus 271 --~-------~l~~~i~~dG~q~~E~~R~~~~~Y~~~~L~~l~~~a~~a~~~G~DL~~~~~~~g~~L~~a~ey~~~y~~~ 341 (400) . ...+-|.+||+.-|-. . .|..|+...+..++++..-..--=|....+.-..|.+++.-+- ...+ T Consensus 243 l~~~~~~vt~G~~dGfk~DGS~~qH~----~-~Y~gYg~~~l~~~~~~~~ll~gT~f~~~~~~~~~l~~~l~~~~-~~~~ 316 (384) T d1hn0a1 243 ITGALTQVPPGGKDGLRPDGTAWRHE----G-NYPGYSFPAFKNASQLIYLLRDTPFSVGESGWNNLKKAMVSAW-IYSN 316 (384) T ss_dssp HHHHHHSCCSTTCSEECTTSCEEETT----E-ECHHHHHHHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHHH-HTBS T ss_pred HHHHHCCCCCCCCCCCCCCCCEEECC----C-CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH-HHHC T ss_conf 88775047888788645788755067----8-7742699999999999999679987679899999999999999-9845 Q ss_pred CCCCCCCCCCC--CCCCCHHHHHHHHHHHHH-----HCCCHHHHHHHHHHC Q ss_conf 88656722244--455541578899999985-----138857899999717 Q T0588 342 PQSEWPYQQIK--EWDKKQEEACWILRRASF-----FDPKAGYEAIGAQFR 385 (400) Q Consensus 342 ~~~~~p~~~~~--~~~~~~~~~~~~~~~aa~-----~~~~p~~~~~~~~~~ 385 (400) + .||.--.. ++......... ...++. ...+++-...+.++. T Consensus 317 ~--~~~~~~~GR~p~~~~~~~~~~-~a~~~~al~g~~~~D~~~A~~ylrl~ 364 (384) T d1hn0a1 317 P--EVGLPLAGRHPFNSPSLKSVA-QGYYWLAMSAKSSPDKTLASIYLAIS 364 (384) T ss_dssp S--BBCGGGCTTCTTSCCBGGGGH-HHHHHHHTTSTTSCCHHHHHHHHHHH T ss_pred C--CCCCCCCCCCCCCCCCCCCHH-HHHHHHHHCCCCCCCHHHHHHHHHHH T ss_conf 4--466555577789987554318-99999970788667999999999873 No 4 >d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Probab=91.32 E-value=0.39 Score=23.30 Aligned_cols=180 Identities=11% Similarity=0.045 Sum_probs=85.6 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH Q ss_conf 88888605888899999999998740531001455210013677777665413689898999999999999832798887 Q T0588 129 LGLAYYFSGDEKYAQKAVDFLNVWFLDAKTKMNPHLTYGQTIPGKNKGMGRGAGMIDIYSFTEMIDAMTLMENSKAFTPK 208 (400) Q Consensus 129 LALaw~lTGd~~YA~kA~~iL~aW~~~~~T~mnP~l~yaq~~~g~~~~~g~~~gl~~~~~~~~~~~A~~llr~~~~wt~~ 208 (400) |-++|.+|||++|.+.|.+....+.- +..+. ..... ...| ...+.-++.++++..+ + T Consensus 51 lwl~ye~Tgd~~~~~~a~~~~~~~~~----~~~~~-------~~~~~---hd~G---f~~~~s~~~~y~~Tgd-----~- 107 (377) T d2d5ja1 51 LWLCYEYTGDEQYREGAVRTVASFRE----RLDRF-------ENLDH---HDIG---FLYSLSAKAQWIVEKD-----E- 107 (377) T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHH----HHHTT-------TTCSS---STHH---HHHHTTHHHHHHHHCC-----H- T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHH----HHCCC-------CCCCC---CCCC---HHHHHHHHHHHHHCCC-----H- T ss_conf 99999986999999999999999997----52244-------55663---4763---1257679999987299-----9- Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCC-CCCCC-------CCHHHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 899999999999999872313655-34433-------431079-----99999988886089999999999987621002 Q T0588 209 VKKGMKEWFTQLVEWMQTSPVAAE-EQRAK-------NNHGLA-----YDVQLTAYALYTGNQDLAMKTIQEFPEKRLFA 275 (400) Q Consensus 209 d~~~~~~w~~~~~~wl~~s~~g~~-~~~~~-------nNhg~~-----~~~~~~aia~~~~d~~l~~~ai~~~~~~~l~~ 275 (400) ..++......+.|...+.-.. ....+ +++.+| ....++-.+-.++|+...+.++..+.. .+.. T Consensus 108 ---~y~~~a~~~a~~L~~r~~~~~g~~~~w~~~~~~~~~~~~~iD~lm~~~~l~~~~~~tgd~~y~~~A~~h~~~-~~~~ 183 (377) T d2d5ja1 108 ---SARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRRVAEAHALK-SRRF 183 (377) T ss_dssp ---HHHHHHHHHHHHHHTTEETTTTEECCSSSTTCTTTTTEEEGGGGGGHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHH T ss_pred ---HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHH T ss_conf ---899999999999998318677854357878887777660551254299999998850987699999999999-9998 Q ss_pred HHHHHCCHHHHHC------C------CCCCC----HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHH Q ss_conf 2201012045640------4------57630----356659999999999985283222134625547999999999863 Q T0588 276 QIEPDGKQPLELA------R------TTALG----YTIFNLGHMLDMCSIASTLGQDIYNATSQDGRSITAALKFLIPYI 339 (400) Q Consensus 276 ~i~~dG~q~~E~~------R------~~~~~----Y~~~~L~~l~~~a~~a~~~G~DL~~~~~~~g~~L~~a~ey~~~y~ 339 (400) .+.+||+..+... + -|+.+ ++.-.=..+..++++.+..+..-| -....+..+|+++.. T Consensus 184 l~r~d~s~~~~~~~~~~tG~~~~~~t~qG~~~~s~WsRGqaW~i~gl~~~~~~t~~~~~------l~~a~~~a~~~l~~~ 257 (377) T d2d5ja1 184 LVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADL------LETAKRMARHFLARV 257 (377) T ss_dssp TBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHH------HHHHHHHHHHHHTTC T ss_pred HCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHC T ss_conf 26889974889886589986257888878877316763219999999999998388178------999999999999738 Q ss_pred CC Q ss_conf 67 Q T0588 340 GK 341 (400) Q Consensus 340 ~~ 341 (400) .. T Consensus 258 ~~ 259 (377) T d2d5ja1 258 PE 259 (377) T ss_dssp CT T ss_pred CC T ss_conf 87 No 5 >d1x1ia1 a.102.3.2 (A:26-386) Xanthan lyase {Bacillus sp. gl1 [TaxId: 84635]} Probab=87.48 E-value=0.76 Score=21.47 Aligned_cols=236 Identities=11% Similarity=0.136 Sum_probs=126.2 Q ss_pred HHHHHHHHHHH-----C-------CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 89999999850-----6-------51589999999999998507885000544357777655534256444788888877 Q T0588 30 EKLAKVKEKAD-----S-------PLYAPAVKTLLRDADKALKMTPPSVMDKTMTADSGDKHDYMSMGPYWWPDPSKPDG 97 (400) Q Consensus 30 ~~l~~~k~~~~-----~-------~~~~~a~~~L~~~ad~~l~~~p~sV~~k~~~~~sg~~hdy~s~~py~wP~~~~~~g 97 (400) ++++.+|.++. . +...+.+.+|.++|+..++.- ||.....+-||+.. T Consensus 2 dd~~~lr~rw~~~l~g~~~~d~~d~~~~~~l~~l~~~A~~~~~~~-----------------~~~~~~~~lW~~l~---- 60 (361) T d1x1ia1 2 DEFDALRIKWATLLTGGPALDPADSDIAARTDKLAQDANDYWEDM-----------------DLSSSRTYIWYALR---- 60 (361) T ss_dssp CHHHHHHHHHHHHHHCCTTCCTTCHHHHHHHHHHHHHHHHHHHHC-----------------CCCTTCSCSSGGGC---- T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-----------------CCCCCCCCCCCCCC---- T ss_conf 189999999999970887678676899999999999999778745-----------------88877667678887---- Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCC Q ss_conf 6621468851776553342889999999999888886-----05888899999999998740531001455210013677 Q T0588 98 LPYIRKDGQRNPELDKLDRNKLGDMSKAVTTLGLAYY-----FSGDEKYAQKAVDFLNVWFLDAKTKMNPHLTYGQTIPG 172 (400) Q Consensus 98 ~py~~rdg~~nP~~~~~d~~~l~~~~~a~~~LALaw~-----lTGd~~YA~kA~~iL~aW~~~~~T~mnP~l~yaq~~~g 172 (400) ...+...+.....++..+|+||. +.+|++-.++..+-|.-|+.+ ..||+ T Consensus 61 --------------~~~~~~~l~~~~~rl~~mA~Ay~~pgs~ly~d~~l~~~I~~al~~~~~~---~y~~~--------- 114 (361) T d1x1ia1 61 --------------GNGTSDNVNAVYERLRTMALAATTVGSSLYGNADLKEDILDALDWLYVN---SYNST--------- 114 (361) T ss_dssp --------------CTTCHHHHHHHHHHHHHHHHHHHSTTCTTTTCHHHHHHHHHHHHHHHHH---TSSTT--------- T ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC---CCCCC--------- T ss_conf --------------6663047999999999999998299985538999999999999999971---88888--------- Q ss_pred CCCCCCCC----HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 77766541----36898989999999999998327988878999999999999998723136553443343107999999 Q T0588 173 KNKGMGRG----AGMIDIYSFTEMIDAMTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPVAAEEQRAKNNHGLAYDVQL 248 (400) Q Consensus 173 ~~~~~g~~----~gl~~~~~~~~~~~A~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~g~~~~~~~nNhg~~~~~~~ 248 (400) .....+.| +|+= -.+.++.-+|++ .+++++.......+..+ ..+ ...+. .| -+|....+ T Consensus 115 ~~~~~~NWW~~eIg~P-----~~l~~~liLl~d--~l~~~~~~~~~~~i~~f----~p~----~~~TG-aN-~~d~a~~~ 177 (361) T d1x1ia1 115 RSRSAYNWWHWQLGIP-----MSLNDIAVLLYD--DISAARMATYMDTIDYF----TPS----IGLTG-AA-RAWQAIVV 177 (361) T ss_dssp SCTTSSSHHHHHTHHH-----HHHHHHHHHTGG--GCCHHHHHHHHHHHHHH----CCS----CCCCH-HH-HHHHHHHH T ss_pred CCCCCCCCHHHHCCCH-----HHHHHHHHHHCC--CCCHHHHHHHHHHHHHH----CCC----CCCCC-HH-HHHHHHHH T ss_conf 8998999125551757-----999999998514--16999999999899985----789----88653-07-88789999 Q ss_pred HHHHHHCCCHHHHHHHHHHHHHH-HHH-----HHHHHHCCHHHHHCCCCCCCHH-HHHHHHHHHHHHHHHHCCCHHHCCC Q ss_conf 98888608999999999998762-100-----2220101204564045763035-6659999999999985283222134 Q T0588 249 TAYALYTGNQDLAMKTIQEFPEK-RLF-----AQIEPDGKQPLELARTTALGYT-IFNLGHMLDMCSIASTLGQDIYNAT 321 (400) Q Consensus 249 ~aia~~~~d~~l~~~ai~~~~~~-~l~-----~~i~~dG~q~~E~~R~~~~~Y~-~~~L~~l~~~a~~a~~~G~DL~~~~ 321 (400) +.-|++.+|.+.+..+++..... ++. .-|.+||++-|-. +..|. .|+...+..+++++.-...-=|.+. T Consensus 178 ~~rglL~~d~~~~~~a~~~i~~~~~~~~v~~gdG~~~DgSf~qH~----~~~Y~G~YG~~~l~~~~~~~~~l~gT~~~~~ 253 (361) T d1x1ia1 178 GVRAVIVKDAVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHT----TFAYTGGYGSSVLETTANLMYLLSGSTWSVS 253 (361) T ss_dssp HHHHHHHTCHHHHHHHHHHTTSTTSSSCCSSSSEECTTSCEEETT----TEECTTTHHHHHHHHHHHHHHHHTTSTTCCC T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCEECCCCEECCC----CEECCCCCHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 999998469999999999976401305526888651478634257----7101675339999999999999779988788 Q ss_pred CCCCHHHHHHHHHHH Q ss_conf 625547999999999 Q T0588 322 SQDGRSITAALKFLI 336 (400) Q Consensus 322 ~~~g~~L~~a~ey~~ 336 (400) .+. +..-.+|+. T Consensus 254 ~~~---~~~l~~~i~ 265 (361) T d1x1ia1 254 DPN---QSNVWQWIY 265 (361) T ss_dssp CGG---GGHHHHHHH T ss_pred HHH---HHHHHHHHH T ss_conf 789---999999999 No 6 >d1f1sa1 a.102.3.2 (A:249-619) Hyaluronate lyase {Streptococcus agalactiae [TaxId: 1311]} Probab=83.86 E-value=1.1 Score=20.35 Aligned_cols=197 Identities=13% Similarity=0.108 Sum_probs=107.6 Q ss_pred CHHHHHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 4288999999999988888605-----88889999999999874053100145521001367777766541368989899 Q T0588 115 DRNKLGDMSKAVTTLGLAYYFS-----GDEKYAQKAVDFLNVWFLDAKTKMNPHLTYGQTIPGKNKGMGRGAGMIDIYSF 189 (400) Q Consensus 115 d~~~l~~~~~a~~~LALaw~lT-----Gd~~YA~kA~~iL~aW~~~~~T~mnP~l~yaq~~~g~~~~~g~~~gl~~~~~~ 189 (400) +...+.....+...+|+||.-- +|+.-+++..+-|+-|..+ ..+|. +..++ .+.|=-= .+.. T Consensus 64 ~s~~~~~~~~rL~~mA~aY~~pgs~ly~d~~l~~~I~~aL~~l~~~---~y~~~----~~~~~----~~NWW~~--eIg~ 130 (371) T d1f1sa1 64 NSAQLTATYRRLEDLAKQITNPHSTIYKNEKAIRTVKESLAWLHQN---FYNVN----KDIEG----SANWWDF--EIGV 130 (371) T ss_dssp SHHHHHHHHHHHHHHHHHHTCTTSTTTTCHHHHHHHHHHHHHHHHH---TSSTT----CCCCT----TSCHHHH--HTHH T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH---CCCCC----CCCCC----CCCCCCH--HCCC T ss_conf 5258999999999999998499985547999999999999999983---89987----66889----8986112--3175 Q ss_pred HH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCC-CCCHHHHHHHHHHHHHHHCCCHHHHHHH Q ss_conf 99-999999998327988878999999999999998723136---553443-3431079999999888860899999999 Q T0588 190 TE-MIDAMTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPVA---AEEQRA-KNNHGLAYDVQLTAYALYTGNQDLAMKT 264 (400) Q Consensus 190 ~~-~~~A~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~g---~~~~~~-~nNhg~~~~~~~~aia~~~~d~~l~~~a 264 (400) .. +.+..-+|+ +.+++++.......+..+. +.. ++.+ .....+ ..| .++...-++.-|++.+|.+.+..+ T Consensus 131 P~~l~~~lill~--d~l~~~~~~~~~~~i~~~~-p~p-~~~~~~~~~~~~~TGaN-~vd~a~~~i~~glL~~d~~~v~~a 205 (371) T d1f1sa1 131 PRSITGTLSLMN--NYFTDAEIKTYTDPIEHFV-PDA-EYFRKTLVNPFKALGGN-LVDMGRVKIIEGLLRKDNTIIEKT 205 (371) T ss_dssp HHHHHHHHHHTG--GGSCHHHHHHHHHHHHHHC-CCT-TEESTTSSCCEECCHHH-HHHHHHHHHHHHHHTTCHHHHHHH T ss_pred HHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHC-CCC-HHHCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHCCHHHHHHH T ss_conf 799999998720--0159999999999999877-881-33225678866365226-999999999999982899999999 Q ss_pred HHHHHHHHHH-----HHHHHHCCHHHHHCCCCCCCHH-HHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHH Q ss_conf 9998762100-----2220101204564045763035-66599999999999852832221346255479999999998 Q T0588 265 IQEFPEKRLF-----AQIEPDGKQPLELARTTALGYT-IFNLGHMLDMCSIASTLGQDIYNATSQDGRSITAALKFLIP 337 (400) Q Consensus 265 i~~~~~~~l~-----~~i~~dG~q~~E~~R~~~~~Y~-~~~L~~l~~~a~~a~~~G~DL~~~~~~~g~~L~~a~ey~~~ 337 (400) ++.... .+. .-|.+||++-|-. +..|+ .|+...+..+++++.....-=|.+. ...+..-.+|+.. T Consensus 206 ~~~i~~-v~~~v~~gdG~~~DgSfiqH~----~v~Y~G~YG~~~l~~~~~~~~~l~gT~~~~~---~~~~~~l~~~i~~ 276 (371) T d1f1sa1 206 SHSLKN-LFTTATKAEGFYADGSYIDHT----NVAYTGAYGNVLIDGLTQLLPIIQETDYKIS---NQELDMVYKWINQ 276 (371) T ss_dssp HHHHGG-GSCCBSSSSEEBTTSCEEETT----TEECTTTHHHHHHHHHHHHHHHHTTSTTCCC---HHHHHHHHHHHHH T ss_pred HHHHHH-HCCCCCCCCCEECCCCHHCCC----CEECCCCCHHHHHHHHHHHHHHHCCCCCCCC---HHHHHHHHHHHHH T ss_conf 998765-611035787230476610046----7000676239999999999999767988888---7899999999997 No 7 >d1rwha1 a.102.3.2 (A:4-372) Chondroitinase AC {Arthrobacter aurescens [TaxId: 43663]} Probab=80.72 E-value=1.5 Score=19.61 Aligned_cols=242 Identities=13% Similarity=0.100 Sum_probs=125.7 Q ss_pred HHHHHHHHHHHH-----C-------CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 789999999850-----6-------5158999999999999850788500054435777765553425644478888887 Q T0588 29 AEKLAKVKEKAD-----S-------PLYAPAVKTLLRDADKALKMTPPSVMDKTMTADSGDKHDYMSMGPYWWPDPSKPD 96 (400) Q Consensus 29 ~~~l~~~k~~~~-----~-------~~~~~a~~~L~~~ad~~l~~~p~sV~~k~~~~~sg~~hdy~s~~py~wP~~~~~~ 96 (400) .++++.+|.++. . +.....+.+|.++|...+.. ++ +.....|-|||-.. T Consensus 3 ~~d~~~lr~rw~~~l~g~~~~~~~d~~~~~~l~~l~~~a~~~~~~-----~~------------~~~~~~~lW~dl~~-- 63 (369) T d1rwha1 3 AAEFAALRNRWVDQITGRNVIQAGDPDFAKAITALNNKAADSLAK-----LD------------AAAGRTSVFTDLSL-- 63 (369) T ss_dssp HHHHHHHHHHHHHHHHCTTCCCTTCHHHHHHHHHHHHHHHHHHHT-----BC------------CCTTCSCSBTTCCT-- T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-----CC------------CCCCCCCCCCCCCC-- T ss_conf 679999999999997488766657878999999999999999997-----33------------56776666888878-- Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC Q ss_conf 766214688517765533428899999999998888860588-----889999999999874053100145521001367 Q T0588 97 GLPYIRKDGQRNPELDKLDRNKLGDMSKAVTTLGLAYYFSGD-----EKYAQKAVDFLNVWFLDAKTKMNPHLTYGQTIP 171 (400) Q Consensus 97 g~py~~rdg~~nP~~~~~d~~~l~~~~~a~~~LALaw~lTGd-----~~YA~kA~~iL~aW~~~~~T~mnP~l~yaq~~~ 171 (400) .+...+.....+...+|+||...|+ ++-.++...-|+ |+.+. ..++ + T Consensus 64 -----------------~~sa~~~~~~~rl~~mA~Ay~~pgs~~y~d~~l~~~I~~al~-~l~~~--~~~~-----~--- 115 (369) T d1rwha1 64 -----------------AKDAEMVTTYTRLSQLATAWATPTAAVFGDAAVLAAIKAGLA-DANTL--CYND-----R--- 115 (369) T ss_dssp -----------------TSHHHHHHHHHHHHHHHHHHTSTTSTTTTCHHHHHHHHHHHH-HHHHH--TSST-----T--- T ss_pred -----------------CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH-HHHHC--CCCC-----C--- T ss_conf -----------------862789999999999999981999954269999999999999-99971--8878-----9--- Q ss_pred CCCCCCCCCHHHHHHHHHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC---C--CCCCCC-CCCHHHHH Q ss_conf 77776654136898989999-99999999832798887899999999999999872313---6--553443-34310799 Q T0588 172 GKNKGMGRGAGMIDIYSFTE-MIDAMTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPV---A--AEEQRA-KNNHGLAY 244 (400) Q Consensus 172 g~~~~~g~~~gl~~~~~~~~-~~~A~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~---g--~~~~~~-~nNhg~~~ 244 (400) ....|.|=.- .+.... +.+..-+| ++.+++++.....+.+.. +..... . ...... ..| -++. T Consensus 116 --~~~~gNWW~~--eIg~P~~l~~~liLl--~d~l~~~~~~~~~~~i~~----f~pdp~~~~~~~~~~~~~tGaN-rvd~ 184 (369) T d1rwha1 116 --KEEVGNWWSW--EIGVPRALADAMVLL--HAELSAAERTAYCAAIDH----FVPDPWLQFPPKRGKITSVGAN-RVDL 184 (369) T ss_dssp --CCCCSCHHHH--HTHHHHHHHHHHHHT--TTTSCHHHHHHHHHHHHH----HCSCTTEESCGGGCCEECCHHH-HHHH T ss_pred --CCCCCCCCHH--HCCCHHHHHHHHHHH--CCCCCHHHHHHHHHHHHH----HCCCCCCCCCCCCCCCCCCHHH-HHHH T ss_conf --9999991015--328589999999985--021798999999999998----6678643346667752252009-9999 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----HHHHHHCCHHHHHCCCCCCCHH-HHHHHHHHHHHHHHHHCCCHHH Q ss_conf 999998888608999999999998762100-----2220101204564045763035-6659999999999985283222 Q T0588 245 DVQLTAYALYTGNQDLAMKTIQEFPEKRLF-----AQIEPDGKQPLELARTTALGYT-IFNLGHMLDMCSIASTLGQDIY 318 (400) Q Consensus 245 ~~~~~aia~~~~d~~l~~~ai~~~~~~~l~-----~~i~~dG~q~~E~~R~~~~~Y~-~~~L~~l~~~a~~a~~~G~DL~ 318 (400) ..-++.-|++.+|.+.+..+++.... .+. .-+.+||++-|-. +..|+ .|+...+..+++++.....-=| T Consensus 185 a~~~i~~glL~~d~~~v~~a~~~i~~-v~~~vt~gdGf~~DgSf~qH~----~~~Y~G~YG~~~l~~~~~~~~~l~gT~~ 259 (369) T d1rwha1 185 CQGIIIRSLAGEDPTKLNHAVAGLSQ-VWQYVTSGDGIFRDGSFIQHS----TTPYTGSYGVVLLTGLSKLFSLLGGTAF 259 (369) T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHGGG-GGSCBSSSSEEBTTSCEEETT----TEECTTTHHHHHHHHHHHHHHHHTTSTT T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHH-HCCCCCCCCCCCCCCCEEEEC----CEECCCCCHHHHHHHHHHHHHHHCCCCC T ss_conf 99999999980899999999998641-122245897423477636304----4421664259999999999999779989 Q ss_pred CCCCCCCHHHHHHHHHHH Q ss_conf 134625547999999999 Q T0588 319 NATSQDGRSITAALKFLI 336 (400) Q Consensus 319 ~~~~~~g~~L~~a~ey~~ 336 (400) .+.. ..+..-.+|+. T Consensus 260 ~~~~---~~~~~l~~~i~ 274 (369) T d1rwha1 260 EVSD---PTRSIFFDAVE 274 (369) T ss_dssp CCCC---GGGHHHHHHHH T ss_pred CCCH---HHHHHHHHHHH T ss_conf 8887---89999999999 No 8 >d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Probab=76.54 E-value=2 Score=18.82 Aligned_cols=33 Identities=12% Similarity=0.247 Sum_probs=26.8 Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 999999999988888605888899999999998 Q T0588 119 LGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLNV 151 (400) Q Consensus 119 l~~~~~a~~~LALaw~lTGd~~YA~kA~~iL~a 151 (400) ++..+-.++.+|-+|++||++.|.+.|.+++.. T Consensus 121 ~Yd~Af~l~a~a~~~~~tg~~~~~~~a~~~~~~ 153 (402) T d1fp3a_ 121 IFSECFYTMAMNELWRVTAEARYQSEAVDMMDQ 153 (402) T ss_dssp SHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH T ss_conf 412089999989988603998999999999999 No 9 >d1n7oa1 a.102.3.2 (A:170-540) Hyaluronate lyase {Streptococcus pneumoniae [TaxId: 1313]} Probab=75.09 E-value=2.2 Score=18.58 Aligned_cols=195 Identities=10% Similarity=0.073 Sum_probs=105.9 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 428899999999998888860588-----889999999999874053100145521001367777766541368989899 Q T0588 115 DRNKLGDMSKAVTTLGLAYYFSGD-----EKYAQKAVDFLNVWFLDAKTKMNPHLTYGQTIPGKNKGMGRGAGMIDIYSF 189 (400) Q Consensus 115 d~~~l~~~~~a~~~LALaw~lTGd-----~~YA~kA~~iL~aW~~~~~T~mnP~l~yaq~~~g~~~~~g~~~gl~~~~~~ 189 (400) +...+.....+...+|+||...|+ ++-+++..+-|.-|.... .+|. .+ ..|.|-.- .+.. T Consensus 65 ~~~~~~~~~~rL~~mA~ay~~pgs~lY~d~~l~~~I~~al~~l~~~~---y~~~------~~----~~gNWw~~--~Ig~ 129 (371) T d1n7oa1 65 TSANLTATYRKLEEMAKQVTNPSSRYYQDETVVRTVRDSMEWMHKHV---YNSE------KS----IVGNWWDY--EIGT 129 (371) T ss_dssp STHHHHHHHHHHHHHHHHHTCTTSTTTTCHHHHHHHHHHHHHHHHHT---SSTT------CC----CCSCHHHH--HTHH T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC---CCCC------CC----CCCCCHHH--HCCC T ss_conf 51479999999999999985999855369999999999999999708---9888------88----88983036--4075 Q ss_pred HH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCC-CCCHHHHHHHHHHHHHHHCCCHHHHHHH Q ss_conf 99-999999998327988878999999999999998723136---553443-3431079999999888860899999999 Q T0588 190 TE-MIDAMTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPVA---AEEQRA-KNNHGLAYDVQLTAYALYTGNQDLAMKT 264 (400) Q Consensus 190 ~~-~~~A~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~g---~~~~~~-~nNhg~~~~~~~~aia~~~~d~~l~~~a 264 (400) .. +.+..-+|+ +.+++++.....+++..|.. - ..+.+ .....+ .+| .++...-++.-|++.+|.+.+..+ T Consensus 130 P~~l~~~lill~--~~l~~~~~~~~~~~i~~~~p-~-p~~~~~~~~~~~~~TGaN-~vd~a~~~i~~glL~~d~~~v~~a 204 (371) T d1n7oa1 130 PRAINNTLSLMK--EYFSDEEIKKYTDVIEKFVP-D-PEHFRKTTDNPVKALGGN-LVDMGRVKVIAGLLRKDDQEISST 204 (371) T ss_dssp HHHHHHHHHHTG--GGSCHHHHHHHHHHHHHHCC-C-TTEECTTSSSCEECCHHH-HHHHHHHHHHHHHHTTCHHHHHHH T ss_pred HHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHCC-C-CHHHCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHCCHHHHHHH T ss_conf 899999998831--11699999999999998678-8-212035677866064116-999899999999986799999999 Q ss_pred HHHHHHHHHH-----HHHHHHCCHHHHHCCCCCCCHH-HHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHH Q ss_conf 9998762100-----2220101204564045763035-66599999999999852832221346255479999999998 Q T0588 265 IQEFPEKRLF-----AQIEPDGKQPLELARTTALGYT-IFNLGHMLDMCSIASTLGQDIYNATSQDGRSITAALKFLIP 337 (400) Q Consensus 265 i~~~~~~~l~-----~~i~~dG~q~~E~~R~~~~~Y~-~~~L~~l~~~a~~a~~~G~DL~~~~~~~g~~L~~a~ey~~~ 337 (400) ++.... .+. .-|..||++-|-. +..|+ .|+...+..+++++.....-=|.+. ...+..-.+|+.. T Consensus 205 ~~~i~~-v~~~v~~gdG~~~DgSf~qH~----~~~Y~G~YG~~~l~~~~~~~~~l~gT~~~~~---~~~~~~l~~~i~~ 275 (371) T d1n7oa1 205 IRSIEQ-VFKLVDQGEGFYQDGSYIDHT----NVAYTGAYGNVLIDGLSQLLPVIQKTKNPID---KDKMQTMYHWIDK 275 (371) T ss_dssp HHHHGG-GGSCCSSSSEECTTSCEEETT----TEECTTTHHHHHHHHHHHHHHHHTTSSSCCC---HHHHTHHHHHHHH T ss_pred HHHHHH-HHEECCCCCCEECCCCEECCC----CEECCCCCHHHHHHHHHHHHHHHCCCCCCCC---HHHHHHHHHHHHH T ss_conf 999887-741102688440377601257----6221675139999999999999779988889---7899999999995 No 10 >d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Probab=71.23 E-value=2.7 Score=18.00 Aligned_cols=24 Identities=13% Similarity=0.286 Sum_probs=12.9 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf 888886058888999999999987 Q T0588 129 LGLAYYFSGDEKYAQKAVDFLNVW 152 (400) Q Consensus 129 LALaw~lTGd~~YA~kA~~iL~aW 152 (400) |..+|.+|||++|-+.+.+..... T Consensus 40 l~~lye~Tgd~~y~~~a~~~~~~~ 63 (363) T d1nc5a_ 40 VLRLWEATGEKRYFEYAKAYADLL 63 (363) T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHH T ss_pred HHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 999998839999999999999998 No 11 >d2h6fb1 a.102.4.3 (B:521-921) Protein farnesyltransferase, beta-subunit {Human (Homo sapiens) [TaxId: 9606]} Probab=63.99 E-value=3.7 Score=17.08 Aligned_cols=151 Identities=13% Similarity=0.067 Sum_probs=62.2 Q ss_pred CCCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHH Q ss_conf 1776553-342889999999999888886058888999999999987405310014552100136777776654136898 Q T0588 107 RNPELDK-LDRNKLGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLNVWFLDAKTKMNPHLTYGQTIPGKNKGMGRGAGMID 185 (400) Q Consensus 107 ~nP~~~~-~d~~~l~~~~~a~~~LALaw~lTGd~~YA~kA~~iL~aW~~~~~T~mnP~l~yaq~~~g~~~~~g~~~gl~~ 185 (400) .-|..+. .|.+++.-...++..|.|.=. +=++...+++++.|..+ .+|+=.|+ +..+....+.. T Consensus 68 ~lp~~~~~lD~~r~~l~yw~l~~L~LL~~-~~~~~~~~~ii~~l~~~-------q~~~GGF~-------g~pg~~~hla~ 132 (401) T d2h6fb1 68 QLTDAYECLDASRPWLCYWILHSLELLDE-PIPQIVATDVCQFLELC-------QSPEGGFG-------GGPGQYPHLAP 132 (401) T ss_dssp EECGGGGGGTTCHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHH-------BCTTSSBB-------SSTTCCBCHHH T ss_pred HCCHHHHCCCCCCHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHH-------CCCCCCCC-------CCCCCCCCHHH T ss_conf 69887606254629999999999998599-85389999999999997-------18999968-------99998743399 Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHCCC--HHHH Q ss_conf 989999999999998327988878999999999999998723136553--443343107999999988886089--9999 Q T0588 186 IYSFTEMIDAMTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPVAAEE--QRAKNNHGLAYDVQLTAYALYTGN--QDLA 261 (400) Q Consensus 186 ~~~~~~~~~A~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~g~~~--~~~~nNhg~~~~~~~~aia~~~~d--~~l~ 261 (400) + +..+.+..++.+...++..|++++.+|+. ....-... .....--++.....++++...++. .+.. T Consensus 133 T---y~Al~~L~ilg~~~~~~~idR~~i~~fL~-------slQ~pDGsF~~~~~ge~D~R~~Y~Av~i~~lL~~~~~~~~ 202 (401) T d2h6fb1 133 T---YAAVNALCIIGTEEAYDIINREKLLQYLY-------SLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLF 202 (401) T ss_dssp H---HHHHHHHHHHCCHHHHTTSCHHHHHHHHH-------TTBCTTSCBBSSTTCCBSHHHHHHHHHHHHHTTCCCTTTT T ss_pred H---HHHHHHHHHCCCCCCCCHHHHHHHHHHHH-------HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH T ss_conf 9---99999999717752102333999999999-------9518889800023677662126999999999589977789 Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHH Q ss_conf 99999987621002220101204564 Q T0588 262 MKTIQEFPEKRLFAQIEPDGKQPLEL 287 (400) Q Consensus 262 ~~ai~~~~~~~l~~~i~~dG~q~~E~ 287 (400) +.++++. ..+...||++..+- T Consensus 203 ~~~~~~I-----~scQ~~dGGfg~~p 223 (401) T d2h6fb1 203 EGTAEWI-----ARCQNWEGGIGGVP 223 (401) T ss_dssp TTHHHHH-----HHHBCTTSSBCSST T ss_pred HHHHHHH-----HHCCCCCCCCCCCC T ss_conf 9999999-----98068888745787 No 12 >d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=59.13 E-value=4.6 Score=16.53 Aligned_cols=27 Identities=11% Similarity=0.201 Sum_probs=19.6 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf 999888886058888999999999987 Q T0588 126 VTTLGLAYYFSGDEKYAQKAVDFLNVW 152 (400) Q Consensus 126 ~~~LALaw~lTGd~~YA~kA~~iL~aW 152 (400) ..-....-++|||.+|.+.|.++.++- T Consensus 179 ~LEf~~LS~lTGd~kY~~~a~r~~~~l 205 (511) T d1dl2a_ 179 QMEFKYLAYLTGNRTYWELVERVYEPL 205 (511) T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTHHHH T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 999999999858739999999999999 No 13 >d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} SCOP: d1fmia_ d1fo3a_ d1fo2a_ d1nxca_ d1dl2a_ d1g6ia_ d1hcuc_ d1hcud_ d1hcua_ d1hcub_ d1krea_ Probab=52.63 E-value=5.8 Score=15.86 Aligned_cols=141 Identities=12% Similarity=0.102 Sum_probs=61.8 Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-CCC-CCCCCCCCCHHCCCCCCCCCC-CCCHHHHHHHHHHHHHHH Q ss_conf 99999999998888860588889999999999874-053-100145521001367777766-541368989899999999 Q T0588 119 LGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLNVWF-LDA-KTKMNPHLTYGQTIPGKNKGM-GRGAGMIDIYSFTEMIDA 195 (400) Q Consensus 119 l~~~~~a~~~LALaw~lTGd~~YA~kA~~iL~aW~-~~~-~T~mnP~l~yaq~~~g~~~~~-g~~~gl~~~~~~~~~~~A 195 (400) +.....-..-.....++|||.+|-+.|.++.+.-. ... ..-+-|+.-..+...-...+. +-+ +..|+.+ -+++.. T Consensus 151 lAe~gsl~LEf~~LS~lTgd~kY~~~a~~~~~~l~~~~~~~~GL~p~~i~~~tg~~~~~~~~siG-a~~DS~Y-EYLlK~ 228 (453) T d1x9da1 151 VAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLG-ARADSYY-EYLLKQ 228 (453) T ss_dssp HHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHHHHHTCSCCBTTBCCSEEETTTCCEESTTEECSS-TTTHHHH-HHHHHH T ss_pred CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEECCCCEEEEC-CCCCHHH-HHHHHH T ss_conf 00423467899999987379579999999998888514778863311474567800146404755-8776289-999999 Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC-------CC---CCCCCCCCHHHHHHHHHHHHHHHCCC-HHHHHHH Q ss_conf 9999832798887899999999999999872313-------65---53443343107999999988886089-9999999 Q T0588 196 MTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPV-------AA---EEQRAKNNHGLAYDVQLTAYALYTGN-QDLAMKT 264 (400) Q Consensus 196 ~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~-------g~---~~~~~~nNhg~~~~~~~~aia~~~~d-~~l~~~a 264 (400) +-++. +=.+.-.+.+.+-+......++.... +. ......-.|-+|..-++.++|....+ .+..+.| T Consensus 229 yil~g---~~~~~~~~~~~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~hL~cF~~G~laLg~~~~~~~~~~~~a 305 (453) T d1x9da1 229 WIQGG---KQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTLALGVYHGLPASHMELA 305 (453) T ss_dssp HHHTT---SCCHHHHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEECEEEGGGGHHHHHHHHHHHTTCCHHHHHHH T ss_pred HHHCC---CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH T ss_conf 98638---964889999999999999862004589856999873786103304457777656888645413887789999 No 14 >d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Probab=51.22 E-value=6.1 Score=15.72 Aligned_cols=48 Identities=13% Similarity=0.111 Sum_probs=27.7 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 66214688517765533428899999999998888860588889999999999 Q T0588 98 LPYIRKDGQRNPELDKLDRNKLGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLN 150 (400) Q Consensus 98 ~py~~rdg~~nP~~~~~d~~~l~~~~~a~~~LALaw~lTGd~~YA~kA~~iL~ 150 (400) ...+..||+..|.. ..++...++-+|..+.+|. .|++.|++-|...++ T Consensus 32 F~~l~~dG~~~~~~----~k~~~~~aR~~~~fs~a~~-~g~~~~~~~A~~g~~ 79 (411) T d2afaa1 32 FGWLGNKGQIKEEM----GTHLWITARMLHVYSVAAS-MGRPGAYDLVDHGIK 79 (411) T ss_dssp ECCBCTTSCBCGGG----CEEHHHHHHHHHHHHHHHH-TTCTTHHHHHHHHHH T ss_pred CCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHH T ss_conf 23468998978887----7214776899999999997-589779999999999 No 15 >d1aa0a_ h.1.17.1 (A:) Fibritin {Bacteriophage T4 [TaxId: 10665]} Probab=49.59 E-value=3 Score=17.71 Aligned_cols=12 Identities=58% Similarity=1.135 Sum_probs=10.5 Q ss_pred CCCCCCCCCCCC Q ss_conf 877662146885 Q T0588 95 PDGLPYIRKDGQ 106 (400) Q Consensus 95 ~~g~py~~rdg~ 106 (400) .||.||+|+||+ T Consensus 94 ~DGq~YVrkDga 105 (113) T d1aa0a_ 94 RDGQAYVRKDGE 105 (113) T ss_dssp CSSCCEEEETTE T ss_pred CCCCEEEEECCC T ss_conf 678402443474 No 16 >d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Probab=48.16 E-value=6.8 Score=15.42 Aligned_cols=131 Identities=13% Similarity=0.108 Sum_probs=57.8 Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC-C-CCCCCCCCCHHCCCCCCC-CCCCCCHHHHHHHHHHHHHHH Q ss_conf 9999999999888886058888999999999987405-3-100145521001367777-766541368989899999999 Q T0588 119 LGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLNVWFLD-A-KTKMNPHLTYGQTIPGKN-KGMGRGAGMIDIYSFTEMIDA 195 (400) Q Consensus 119 l~~~~~a~~~LALaw~lTGd~~YA~kA~~iL~aW~~~-~-~T~mnP~l~yaq~~~g~~-~~~g~~~gl~~~~~~~~~~~A 195 (400) +.....-..-.....++|||++|-+.|.++.+.-... . ..-+.|+.-..+...-.. +..+-+ +..|+.+ -+++.. T Consensus 151 la~~gsl~LEf~~LS~lTgd~kY~~~a~r~~~~l~~~~~~~~GL~p~~i~~~~g~~~~~~~~~iG-a~~DS~Y-EYLlK~ 228 (453) T d1x9da1 151 VAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLG-ARADSYY-EYLLKQ 228 (453) T ss_dssp HHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHHHHHTCSCCBTTBCCSEEETTTCCEESTTEECSS-TTTHHHH-HHHHHH T ss_pred CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCC-CCCCHHH-HHHHHH T ss_conf 33344413677899998587299999999999999735788887660451577854578842348-7741589-999999 Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC---CCC-----------CCCCCCCHHHHHHHHHHHHHHHCCCH Q ss_conf 9999832798887899999999999999872313---655-----------34433431079999999888860899 Q T0588 196 MTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPV---AAE-----------EQRAKNNHGLAYDVQLTAYALYTGNQ 258 (400) Q Consensus 196 ~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~---g~~-----------~~~~~nNhg~~~~~~~~aia~~~~d~ 258 (400) +-+. +. ....+.+++....+-+..+-. ... .....-.|-+|+.-++.++|...++. T Consensus 229 ~il~---g~----~~~~~~~~~~~a~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~hLscF~~G~laLg~~~~~~ 298 (453) T d1x9da1 229 WIQG---GK----QETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTLALGVYHGLP 298 (453) T ss_dssp HHHT---TS----CCHHHHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEECEEEGGGGHHHHHHHHHHHTTCC T ss_pred HHHC---CC----CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCC T ss_conf 9873---88----4189999999999999998355789887379985168866654004877526787740004787 No 17 >d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Probab=44.57 E-value=7.7 Score=15.07 Aligned_cols=26 Identities=19% Similarity=0.070 Sum_probs=20.6 Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf 99888886058888999999999987 Q T0588 127 TTLGLAYYFSGDEKYAQKAVDFLNVW 152 (400) Q Consensus 127 ~~LALaw~lTGd~~YA~kA~~iL~aW 152 (400) .-....-++|||.+|.+.|.++.+.- T Consensus 177 LEF~~LS~lTGd~kY~~~a~~~~~~l 202 (488) T d1hcua_ 177 LEWTRLSDLTGNPQYAQLAQKGESYL 202 (488) T ss_dssp HHHHHHHHHHSCTHHHHHHHHHHHHH T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 88999999738807999999999999 No 18 >d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Probab=38.58 E-value=9.6 Score=14.48 Aligned_cols=33 Identities=33% Similarity=0.383 Sum_probs=22.6 Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 899999999998888860588889999999999 Q T0588 118 KLGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLN 150 (400) Q Consensus 118 ~l~~~~~a~~~LALaw~lTGd~~YA~kA~~iL~ 150 (400) -+....+-..-|--||.+|||+.|.+||+++-+ T Consensus 103 vFEt~iR~LGGLlsAy~Ls~d~~~L~kA~~l~~ 135 (467) T d1nxca_ 103 VFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGV 135 (467) T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH T ss_conf 321006766467778881487789999999999 No 19 >d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Probab=30.06 E-value=13 Score=13.61 Aligned_cols=142 Identities=13% Similarity=0.166 Sum_probs=66.7 Q ss_pred HHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH------HHH-HHHHHHHHCCC---HHH Q ss_conf 999999998-3279888789999999999999987231365534433431079------999-99988886089---999 Q T0588 192 MIDAMTLME-NSKAFTPKVKKGMKEWFTQLVEWMQTSPVAAEEQRAKNNHGLA------YDV-QLTAYALYTGN---QDL 260 (400) Q Consensus 192 ~~~A~~llr-~~~~wt~~d~~~~~~w~~~~~~wl~~s~~g~~~~~~~nNhg~~------~~~-~~~aia~~~~d---~~l 260 (400) .+.+...+. .++.-. ...++.....-+.||...... ...+...||.. ... ++++++.-.++ .+. T Consensus 253 ~l~aL~~~~~~~p~~r---~~~~~~~i~ral~yL~~~Q~~--DGsW~g~wg~~~~ygT~~al~aL~~~G~~~~~~~~~~~ 327 (448) T d1w6ka1 253 VMQALKYFHKRFPEHR---AAEIRETLTQGLEFCRRQQRA--DGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTACAE 327 (448) T ss_dssp HHHHHHHHHHHCTTSS---HHHHHHHHHHHHHHHHHHSCT--TSCCCCSSBSSHHHHHHHHHHHHHHTTCCCBTTBCCHH T ss_pred HHHHHHHHHHHCCCCC---CCCCHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH T ss_conf 9999999744277412---231068999999999714789--98644557876307899999999980767455310499 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHH--HCCCC---CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHH Q ss_conf 99999998762100222010120456--40457---63035665999999999998528322213462554799999999 Q T0588 261 AMKTIQEFPEKRLFAQIEPDGKQPLE--LARTT---ALGYTIFNLGHMLDMCSIASTLGQDIYNATSQDGRSITAALKFL 335 (400) Q Consensus 261 ~~~ai~~~~~~~l~~~i~~dG~q~~E--~~R~~---~~~Y~~~~L~~l~~~a~~a~~~G~DL~~~~~~~g~~L~~a~ey~ 335 (400) ++++++..... | .+||+..+. +..+. +..-+...-.+++.+|.++... ++...+.+|++|+ T Consensus 328 v~ka~~wLls~----Q-~~DGGWge~~~s~~~~~~~~~~~s~~~~TAwAl~aL~~ag~---------~~~~~v~rgv~~L 393 (448) T d1w6ka1 328 VSRACDFLLSR----Q-MADGGWGEDFESCEERRYVQSAQSQIHNTCWAMMGLMAVRH---------PDIEAQERGVRCL 393 (448) T ss_dssp HHHHHHHHHTT----C-CTTSCCCBCTHHHHHTSCCBCSSCCHHHHHHHHHHHHHTTC---------SCHHHHHHHHHHH T ss_pred HHHHHHHHHHC----C-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC---------CCCHHHHHHHHHH T ss_conf 99999999965----1-77899467775445766688999869999999999986589---------8848999999999 Q ss_pred HHHHCCCCCCCCCCCCCC Q ss_conf 986367886567222444 Q T0588 336 IPYIGKPQSEWPYQQIKE 353 (400) Q Consensus 336 ~~y~~~~~~~~p~~~~~~ 353 (400) ..-- .++..||.+.+.. T Consensus 394 ~~~Q-~~~G~W~~~~~~g 410 (448) T d1w6ka1 394 LEKQ-LPNGDWPQENIAG 410 (448) T ss_dssp HHHC-CTTSCCCCCSCCE T ss_pred HHCC-CCCCCCCCCCEEE T ss_conf 9755-8999988876234 No 20 >d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Probab=21.01 E-value=19 Score=12.55 Aligned_cols=29 Identities=24% Similarity=0.268 Sum_probs=16.2 Q ss_pred HHHHHHHHHH--CCCHHHHHH---HHHHHHHHHC Q ss_conf 9998888860--588889999---9999998740 Q T0588 126 VTTLGLAYYF--SGDEKYAQK---AVDFLNVWFL 154 (400) Q Consensus 126 ~~~LALaw~l--TGd~~YA~k---A~~iL~aW~~ 154 (400) +-.+|.+..+ ..|..||++ +++-+-.|+. T Consensus 169 aAalAaas~vf~~~D~~yA~~~L~~A~~~~~fa~ 202 (441) T d1clca1 169 VAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLK 202 (441) T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 9999999886245499999999999999999998 No 21 >d1n4qb_ a.102.4.3 (B:) Protein farnesyltransferase, beta-subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=20.45 E-value=20 Score=12.47 Aligned_cols=63 Identities=10% Similarity=0.018 Sum_probs=27.7 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCCHHHHHHHHHHHHHHHC Q ss_conf 89898999999999999832798887899999999999999872313---65534433431079999999888860 Q T0588 183 MIDIYSFTEMIDAMTLMENSKAFTPKVKKGMKEWFTQLVEWMQTSPV---AAEEQRAKNNHGLAYDVQLTAYALYT 255 (400) Q Consensus 183 l~~~~~~~~~~~A~~llr~~~~wt~~d~~~~~~w~~~~~~wl~~s~~---g~~~~~~~nNhg~~~~~~~~aia~~~ 255 (400) -.|.+..+-.+-...++ ..+++.+.+++.+| +..+.. |-......-=|+-.--.+++++.+.- T Consensus 152 e~D~R~tY~A~~i~~lL---~~~~~~~~~~~~~~-------I~scq~~DGGfg~~p~~EsHgg~TfCavasL~ll~ 217 (346) T d1n4qb_ 152 ENDMRFVYCASCICYML---NNWSGMDMKKAISY-------IRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMG 217 (346) T ss_dssp CCBHHHHHHHHHHHHHT---TCGGGSCHHHHHHH-------HHHTBCTTSSBBSSTTSCBCHHHHHHHHHHHHHHT T ss_pred CCHHHHHHHHHHHHHHH---CCCCCCCHHHHHHH-------HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC T ss_conf 64299999999999984---89960039999999-------99810767884478898761888899999999836 Done!