Query T0592 3NHV, Bacillus halodurans, 144 residues Match_columns 144 No_of_seqs 125 out of 3918 Neff 7.4 Searched_HMMs 22458 Date Mon Jul 5 09:01:13 2010 Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0592.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0592.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 3flh_A Uncharacterized protein 99.9 6.4E-26 2.8E-30 173.5 10.7 116 5-121 4-120 (124) 2 3ilm_A ALR3790 protein; rhodan 99.9 2.4E-26 1.1E-30 176.0 7.9 105 18-124 2-107 (141) 3 3hix_A ALR3790 protein; rhodan 99.9 2E-25 8.8E-30 170.6 5.9 99 22-122 2-101 (106) 4 3eme_A Rhodanese-like domain p 99.9 2.7E-24 1.2E-28 163.8 7.2 101 16-120 2-102 (103) 5 2hhg_A Hypothetical protein RP 99.9 9.2E-24 4.1E-28 160.7 9.4 108 16-125 22-138 (139) 6 3gk5_A Uncharacterized rhodane 99.9 1.3E-23 5.9E-28 159.7 8.0 100 16-122 4-103 (108) 7 1yt8_A Thiosulfate sulfurtrans 99.9 3.4E-23 1.5E-27 157.3 9.8 110 14-127 128-241 (539) 8 3foj_A Uncharacterized protein 99.9 1.4E-23 6E-28 159.7 6.9 97 17-117 3-99 (100) 9 1yt8_A Thiosulfate sulfurtrans 99.9 1E-21 4.5E-26 148.5 11.7 112 17-131 8-121 (539) 10 1tq1_A AT5G66040, senescence-a 99.9 1.5E-22 6.6E-27 153.5 7.2 102 14-120 16-129 (129) 11 1qxn_A SUD, sulfide dehydrogen 99.9 1.3E-21 5.9E-26 147.8 10.3 104 16-122 23-131 (137) 12 1gmx_A GLPE protein; transfera 99.9 1E-21 4.5E-26 148.5 8.0 101 17-123 6-107 (108) 13 1e0c_A Rhodanese, sulfurtransf 99.9 1.7E-21 7.4E-26 147.2 8.8 112 13-127 6-136 (271) 14 2fsx_A RV0390, COG0607: rhodan 99.8 2.2E-21 1E-25 146.4 6.3 107 15-124 4-143 (148) 15 3d1p_A Putative thiosulfate su 99.8 4.1E-21 1.8E-25 144.9 7.6 100 16-117 23-135 (139) 16 1vee_A Proline-rich protein fa 99.8 3.5E-21 1.6E-25 145.3 5.7 109 17-128 6-132 (134) 17 3ipo_A Putative thiosulfate su 99.8 3.2E-20 1.4E-24 139.5 9.9 107 17-125 126-256 (416) 18 2k0z_A Uncharacterized protein 99.8 3.7E-21 1.6E-25 145.2 4.3 92 31-124 14-106 (110) 19 3hzu_A Thiosulfate sulfurtrans 99.8 6.3E-20 2.8E-24 137.8 10.4 107 17-126 41-165 (318) 20 1wv9_A Rhodanese homolog TT165 99.8 1.4E-20 6.4E-25 141.6 5.2 92 16-114 2-93 (94) 21 1okg_A Possible 3-mercaptopyru 99.8 4.4E-20 2E-24 138.8 7.5 106 16-125 14-148 (373) 22 3ics_A Coenzyme A-disulfide re 99.8 1.2E-19 5.2E-24 136.2 9.1 95 14-114 487-581 (588) 23 1t3k_A Arath CDC25, dual-speci 99.8 3.8E-21 1.7E-25 145.1 1.2 107 17-126 29-147 (152) 24 3i2v_A Adenylyltransferase and 99.8 3.8E-20 1.7E-24 139.2 5.9 95 17-114 2-119 (127) 25 3f4a_A Uncharacterized protein 99.8 1.8E-19 8.1E-24 135.1 9.0 111 16-128 31-167 (169) 26 2eg4_A Probable thiosulfate su 99.8 8.7E-20 3.9E-24 137.0 6.2 87 32-120 130-230 (230) 27 1uar_A Rhodanese; sulfurtransf 99.8 1.1E-19 4.9E-24 136.4 6.1 105 17-124 9-131 (285) 28 3g5j_A Putative ATP/GTP bindin 99.8 1.5E-19 6.6E-24 135.6 5.2 95 17-114 3-130 (134) 29 1rhs_A Sulfur-substituted rhod 99.8 1.1E-18 5E-23 130.4 8.4 113 16-128 8-150 (296) 30 2j6p_A SB(V)-AS(V) reductase; 99.8 7.9E-19 3.5E-23 131.3 7.3 101 17-119 6-121 (152) 31 3aay_A Putative thiosulfate su 99.8 1E-18 4.6E-23 130.6 7.7 106 17-125 7-130 (277) 32 1urh_A 3-mercaptopyruvate sulf 99.8 1.4E-18 6.4E-23 129.7 7.3 109 16-127 4-141 (280) 33 1e0c_A Rhodanese, sulfurtransf 99.7 3.2E-18 1.4E-22 127.7 8.1 99 17-119 148-270 (271) 34 1c25_A CDC25A; hydrolase, cell 99.7 8.5E-18 3.8E-22 125.1 6.6 104 16-120 23-147 (161) 35 1uar_A Rhodanese; sulfurtransf 99.7 7.5E-17 3.4E-21 119.5 8.2 91 31-123 162-285 (285) 36 2a2k_A M-phase inducer phospha 99.7 4.1E-17 1.8E-21 121.1 6.4 99 17-116 25-145 (175) 37 2vsw_A Dual specificity protei 99.7 7.2E-17 3.2E-21 119.6 7.1 104 15-118 3-131 (153) 38 2jtq_A Phage shock protein E; 99.7 5.3E-17 2.4E-21 120.4 5.3 82 35-121 3-85 (85) 39 3ipo_A Putative thiosulfate su 99.7 4.8E-17 2.1E-21 120.7 4.3 85 33-120 20-123 (416) 40 1whb_A KIAA0055; deubiqutinati 99.7 1.4E-16 6.4E-21 117.8 6.7 102 16-118 15-144 (157) 41 1rhs_A Sulfur-substituted rhod 99.6 2.4E-16 1.1E-20 116.5 7.6 106 17-126 161-296 (296) 42 3hzu_A Thiosulfate sulfurtrans 99.6 1.7E-16 7.6E-21 117.4 6.7 92 32-125 191-313 (318) 43 1qb0_A Protein (M-phase induce 99.6 5.6E-16 2.5E-20 114.3 7.7 101 17-118 45-167 (211) 44 3aay_A Putative thiosulfate su 99.6 1.3E-15 5.9E-20 112.1 6.8 88 33-122 157-277 (277) 45 2gwf_A Ubiquitin carboxyl-term 99.6 9.8E-16 4.4E-20 112.9 5.8 104 13-118 17-149 (157) 46 1urh_A 3-mercaptopyruvate sulf 99.6 1.2E-15 5.6E-20 112.2 6.1 101 17-121 153-279 (280) 47 2eg4_A Probable thiosulfate su 99.5 5.9E-15 2.6E-19 108.2 5.6 88 30-118 3-106 (230) 48 1okg_A Possible 3-mercaptopyru 99.5 1.7E-15 7.8E-20 111.4 2.5 95 28-124 169-298 (373) 49 2ouc_A Dual specificity protei 99.5 5.5E-14 2.5E-18 102.4 5.7 100 17-117 2-134 (142) 50 1hzm_A Dual specificity protei 97.8 1.2E-05 5.3E-10 52.8 4.3 105 10-114 10-142 (154) 51 3gxh_A Putative phosphatase (D 93.0 0.45 2E-05 25.6 7.8 80 17-100 27-124 (157) 52 2f46_A Hypothetical protein; 7 89.0 1.1 5.1E-05 23.2 6.7 95 17-119 29-145 (156) 53 1fpz_A Cyclin-dependent kinase 88.8 0.91 4.1E-05 23.7 6.0 78 21-100 62-161 (212) 54 1ywf_A Phosphotyrosine protein 85.2 1.9 8.3E-05 21.9 6.5 32 69-100 170-201 (296) 55 2p6n_A ATP-dependent RNA helic 74.8 2.2 1E-04 21.4 3.5 39 72-112 54-92 (191) 56 3i32_A Heat resistant RNA depe 73.8 2 8.9E-05 21.7 3.0 18 91-108 45-62 (300) 57 3eaq_A Heat resistant RNA depe 73.5 4.1 0.00018 19.8 4.6 22 87-108 44-65 (212) 58 1fuk_A Eukaryotic initiation f 72.6 3.4 0.00015 20.3 4.0 41 71-113 29-69 (165) 59 1xri_A AT1G05000; structural g 72.0 4.9 0.00022 19.4 8.0 80 18-100 21-120 (151) 60 2jgn_A DBX, DDX3, ATP-dependen 68.4 5.3 0.00024 19.2 4.2 41 68-110 42-82 (185) 61 2j0s_A ATP-dependent RNA helic 68.1 6 0.00027 18.9 4.9 37 71-109 275-311 (410) 62 2hjv_A ATP-dependent RNA helic 67.2 4.7 0.00021 19.5 3.7 41 69-112 33-73 (163) 63 3eiq_A Eukaryotic initiation f 67.1 6.3 0.00028 18.7 5.7 38 71-110 279-316 (414) 64 3gfp_A DEAD box protein 5; mRN 65.8 5.8 0.00026 19.0 4.0 42 69-113 35-76 (189) 65 2z3y_A Lysine-specific histone 63.3 5 0.00022 19.3 3.3 50 70-122 105-160 (662) 66 1t5i_A C_terminal domain of A 62.8 6.9 0.00031 18.5 3.9 37 74-112 33-69 (172) 67 2xag_A Lysine-specific histone 62.4 5.2 0.00023 19.2 3.2 33 71-106 277-309 (852) 68 2b9w_A Putative aminooxidase; 59.7 8.7 0.00039 17.9 4.0 12 29-40 28-39 (424) 69 2rb4_A ATP-dependent RNA helic 59.0 6.9 0.00031 18.5 3.4 40 71-112 33-72 (175) 70 2g0t_A Conserved hypothetical 58.6 9 0.0004 17.8 5.7 41 79-119 179-222 (350) 71 1rxd_A Protein tyrosine phosph 56.9 9.7 0.00043 17.6 3.8 32 69-100 93-124 (159) 72 3fdf_A FR253; structural genom 56.5 9.8 0.00044 17.6 4.0 28 21-53 21-48 (195) 73 1d5r_A Phosphoinositide phosph 54.7 11 0.00047 17.4 5.8 83 17-99 41-139 (324) 74 2e58_A MNMC2; tRNA wobble urid 51.9 6.2 0.00028 18.8 2.2 40 65-111 212-251 (308) 75 1yks_A Genome polyprotein [con 51.8 7.5 0.00033 18.3 2.6 38 70-109 175-212 (440) 76 2obn_A Hypothetical protein; p 51.3 12 0.00053 17.1 4.8 77 22-116 119-199 (349) 77 2i6j_A Ssoptp, sulfolobus solf 48.1 13 0.0006 16.8 7.4 82 17-100 15-118 (161) 78 2jlq_A Serine protease subunit 45.7 12 0.00054 17.1 2.8 38 71-110 187-224 (451) 79 2whx_A Serine protease/ntpase/ 45.3 14 0.00061 16.7 3.1 37 71-109 354-390 (618) 80 2qy6_A UPF0209 protein YFCK; s 44.9 8.7 0.00039 17.9 2.0 34 67-106 201-234 (257) 81 3bic_A Methylmalonyl-COA mutas 44.2 15 0.00066 16.5 3.1 49 69-117 652-709 (762) 82 2e1m_A L-glutamate oxidase; L- 44.0 16 0.00069 16.4 5.0 44 59-105 28-74 (376) 83 1d5t_A Guanine nucleotide diss 43.0 16 0.00072 16.3 4.3 16 26-41 24-39 (433) 84 3d3j_A Enhancer of mRNA-decapp 42.8 16 0.00072 16.3 3.6 31 74-104 134-165 (306) 85 1y1l_A Arsenate reductase (ARS 42.1 17 0.00074 16.2 3.1 14 71-84 69-82 (124) 86 1zcl_A Protein tyrosine phosph 42.0 17 0.00074 16.2 4.0 31 70-100 115-145 (180) 87 1h3f_A Tyrosyl-tRNA synthetase 39.5 17 0.00076 16.2 2.8 45 69-113 32-84 (432) 88 2o8n_A APOA-I binding protein; 38.5 19 0.00085 15.9 3.6 33 72-104 79-112 (265) 89 1oyw_A RECQ helicase, ATP-depe 38.5 19 0.00085 15.9 3.8 37 71-109 235-271 (523) 90 1g5t_A COB(I)alamin adenosyltr 37.9 19 0.00086 15.8 3.6 37 72-108 28-69 (196) 91 3ju3_A Probable 2-oxoacid ferr 37.5 20 0.00088 15.8 4.0 24 20-43 28-51 (118) 92 2v6i_A RNA helicase; membrane, 37.2 20 0.00089 15.8 4.1 37 71-109 170-206 (431) 93 1jzt_A Hypothetical 27.5 kDa p 36.8 20 0.0009 15.7 3.8 35 71-105 57-92 (246) 94 1c4o_A DNA nucleotide excision 36.6 20 0.00091 15.7 4.3 41 69-111 436-476 (664) 95 3d3k_A Enhancer of mRNA-decapp 36.4 21 0.00092 15.7 3.3 31 74-105 87-119 (259) 96 1jl3_A Arsenate reductase; alp 34.0 22 0.001 15.5 3.7 34 73-107 4-38 (139) 97 1y56_B Sarcosine oxidase; dehy 33.5 23 0.001 15.4 4.7 19 21-40 19-37 (382) 98 2z83_A Helicase/nucleoside tri 33.4 23 0.001 15.4 2.7 37 71-109 189-225 (459) 99 1yj5_A 5' polynucleotide kinas 32.7 22 0.001 15.5 2.5 33 71-103 223-255 (383) 100 1ccw_A Protein (glutamate muta 32.5 24 0.0011 15.3 4.2 13 88-100 102-114 (137) 101 3igf_A ALL4481 protein; two-do 32.3 24 0.0011 15.3 3.7 27 74-101 216-245 (374) 102 3i4j_A Aminotransferase, class 32.1 24 0.0011 15.3 4.8 59 60-120 76-143 (430) 103 3hxk_A Sugar hydrolase; alpha- 31.5 25 0.0011 15.2 4.0 24 86-109 206-231 (276) 104 3bjr_A Putative carboxylestera 31.4 25 0.0011 15.2 3.6 26 86-111 223-250 (283) 105 3bv0_A Adenosylmethionine-8-am 29.7 25 0.0011 15.2 2.4 58 60-119 102-168 (437) 106 3fht_A ATP-dependent RNA helic 29.2 27 0.0012 15.0 3.6 40 71-112 265-304 (412) 107 2j16_A SDP-1, tyrosine-protein 28.8 27 0.0012 14.9 4.1 32 69-100 114-146 (182) 108 1o54_A SAM-dependent O-methylt 28.4 21 0.00093 15.6 1.8 53 63-117 197-250 (277) 109 1w85_B Pyruvate dehydrogenase 27.9 29 0.0013 14.8 7.0 33 71-103 200-232 (324) 110 1n4w_A CHOD, cholesterol oxida 26.6 30 0.0013 14.7 4.2 13 27-39 24-36 (504) 111 2gi4_A Possible phosphotyrosin 26.5 25 0.0011 15.1 1.9 14 35-48 35-48 (156) 112 1rw1_A Conserved hypothetical 26.2 31 0.0014 14.6 4.2 22 20-41 13-34 (114) 113 2ts1_A Tyrosyl-tRNA synthetase 26.1 29 0.0013 14.8 2.2 22 91-112 55-76 (419) 114 2bcg_G Secretory pathway GDP d 26.0 31 0.0014 14.6 4.0 10 32-41 35-44 (453) 115 1ihu_A Arsenical pump-driving 25.9 31 0.0014 14.6 5.2 32 74-105 328-362 (589) 116 2b3z_A Riboflavin biosynthesis 25.1 31 0.0014 14.6 2.2 17 91-107 288-304 (373) 117 2oud_A Dual specificity protei 25.0 32 0.0014 14.5 4.0 33 68-100 83-116 (177) 118 2g6v_A Riboflavin biosynthesis 24.7 33 0.0015 14.5 2.5 15 93-107 314-328 (402) 119 3hlk_A Acyl-coenzyme A thioest 24.5 33 0.0015 14.5 3.1 10 90-99 355-364 (446) 120 1ps9_A 2,4-dienoyl-COA reducta 24.2 33 0.0015 14.4 3.3 37 71-110 372-413 (671) 121 1j9i_A GPNU1 DBD;, terminase s 23.9 25 0.0011 15.2 1.5 17 108-124 19-35 (68) 122 2v1x_A ATP-dependent DNA helic 23.4 35 0.0015 14.3 3.7 37 71-109 266-302 (591) 123 3dje_A Fructosyl amine: oxygen 23.3 35 0.0015 14.3 4.6 21 21-41 20-40 (438) 124 2qv0_A Protein MRKE; structura 23.3 35 0.0016 14.3 3.2 66 19-103 43-108 (143) 125 2pid_A Tyrosyl-tRNA synthetase 23.3 35 0.0016 14.3 2.3 47 68-114 40-94 (356) 126 2q05_A Late protein H1, dual s 22.6 36 0.0016 14.2 3.9 33 68-100 121-154 (195) 127 2wv9_A Flavivirin protease NS2 22.4 36 0.0016 14.2 4.0 37 72-110 410-446 (673) 128 2img_A Dual specificity protei 22.3 36 0.0016 14.2 7.1 80 19-100 25-118 (151) 129 1wcv_1 SOJ, segregation protei 22.1 37 0.0016 14.2 3.7 21 20-40 24-44 (257) 130 2ax3_A Hypothetical protein TM 22.0 37 0.0017 14.2 2.8 31 72-103 52-84 (502) 131 2hxp_A Dual specificity protei 21.9 37 0.0017 14.1 3.8 32 69-100 82-114 (155) 132 3hdq_A UDP-galactopyranose mut 21.6 38 0.0017 14.1 3.5 10 32-41 53-62 (397) 133 2r0b_A Serine/threonine/tyrosi 21.2 38 0.0017 14.1 3.9 33 68-100 86-119 (154) 134 2fek_A Low molecular weight pr 21.2 38 0.0017 14.1 3.7 22 75-97 25-46 (167) 135 2vvm_A Monoamine oxidase N; FA 20.9 39 0.0017 14.0 4.3 18 88-105 52-69 (495) 136 2qzj_A Two-component response 20.3 40 0.0018 13.9 3.3 26 18-43 35-60 (136) 137 3f6p_A Transcriptional regulat 20.2 40 0.0018 13.9 3.6 67 18-102 33-99 (120) No 1 >3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A Probab=99.93 E-value=6.4e-26 Score=173.53 Aligned_cols=116 Identities=23% Similarity=0.336 Sum_probs=103.9 Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCC-CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCC Q ss_conf 89999986557001799999999618988899864522-23223234543333725655654200035753588852887 Q T0592 5 EAYRHYMKKLSYETDIADLSIDIKKGYEGIIVVDVRDA-EAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPA 83 (144) Q Consensus 5 ~a~~~f~~~~~~~i~~~el~~~l~~g~~~~vlIDvR~~-~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~ 83 (144) .....+...++..|++.++.++|++++++++|||||+. .||+.+|||||+|+|.+++.. ....++++++||+||.+++ T Consensus 4 ~~~~~l~~~~~~~I~~~~l~~~l~~~~~~~~iIDVR~~~~e~~~ghIpGAi~ip~~~l~~-~~~~l~~~~~vvv~c~~g~ 82 (124) T 3flh_A 4 KKIELLTTYLSLYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLAT-RIGELDPAKTYVVYDWTGG 82 (124) T ss_dssp HHHHHHHHHHTTEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHHHHHH-HGGGSCTTSEEEEECSSSS T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCEECCCHHHHH-HHHHCCCCCCEEEEECCCC T ss_conf 889999986072328999999998289697999899986889729878989767141688-9985699986899979999 Q ss_pred CCHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCC Q ss_conf 30567899999971898066527959998738941377 Q T0592 84 CNGATKAAAKFAQLGFRVKELIGGIEYWRKENGEVEGT 121 (144) Q Consensus 84 ~~~s~~aa~~L~~~G~~v~~l~GG~~aW~~~G~pve~~ 121 (144) +.++..++..|...||+|++|+|||.+|+++|+|||.- T Consensus 83 ~~~~~~aa~~l~~~G~~v~~L~GG~~~W~~ag~PlE~~ 120 (124) T 3flh_A 83 TTLGKTALLVLLSAGFEAYELAGALEGWKGMQLPLEHH 120 (124) T ss_dssp CSHHHHHHHHHHHHTCEEEEETTHHHHHHHTTCCEEC- T ss_pred CCHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCEECC T ss_conf 73689999999977983899659699998889982406 No 2 >3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Probab=99.93 E-value=2.4e-26 Score=176.03 Aligned_cols=105 Identities=28% Similarity=0.502 Sum_probs=96.4 Q ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC Q ss_conf 17999999996189888998645222322323454333372565565420003575358885288730567899999971 Q T0592 18 TDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQL 97 (144) Q Consensus 18 i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~ 97 (144) .|+.+|+++|.+|+++++|||||++.||..||||||+|+|+.++.......++++++||+||.++ .+|..+++.|..+ T Consensus 2 ~da~~l~~~l~~G~p~~~iiDvR~~~ey~~ghIpgA~~ip~~~~~~~~~~~l~~~~~ivvyc~~g--~rs~~aa~~L~~~ 79 (141) T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASSSLEKSRDIYVYGAGD--EQTSQAVNLLRSA 79 (141) T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGGGHHHHHHTTSCTTSEEEEECSSH--HHHHHHHHHHHHT T ss_pred CCHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCC--HHHHHHHHHHHHC T ss_conf 78999999997799696999799889996493777324845766541386669998599989998--4999999999974 Q ss_pred CC-CEEEECCCHHHHHHCCCCCCCCCCC Q ss_conf 89-8066527959998738941377776 Q T0592 98 GF-RVKELIGGIEYWRKENGEVEGTLGA 124 (144) Q Consensus 98 G~-~v~~l~GG~~aW~~~G~pve~~~~~ 124 (144) || +|++|+|||.+|+++|+|+|+.... T Consensus 80 G~~~v~~L~GG~~~W~~~g~p~e~~~~~ 107 (141) T 3ilm_A 80 GFEHVSELKGGLAAWKAIGGPTEGIIES 107 (141) T ss_dssp TCCSEEECTTHHHHHHHTTCCEEEEC-- T ss_pred CCCCEEEECCHHHHHHHCCCCCCCCCCC T ss_conf 9635899249699999879984178788 No 3 >3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Probab=99.91 E-value=2e-25 Score=170.61 Aligned_cols=99 Identities=27% Similarity=0.464 Sum_probs=90.5 Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC- Q ss_conf 9999996189888998645222322323454333372565565420003575358885288730567899999971898- Q T0592 22 DLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQLGFR- 100 (144) Q Consensus 22 el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~- 100 (144) -|+++|++|+++++|||||++.||..+|||||+|+|++++.......++++++||+||.++ .+|..++..|...||+ T Consensus 2 ~Lk~rl~~g~~~~~lIDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~l~~~~~ivv~c~~g--~rs~~aa~~L~~~G~~~ 79 (106) T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASSSLEKSRDIYVYGAGD--EQTSQAVNLLRSAGFEH 79 (106) T ss_dssp -----------CCEEEECSCHHHHHTCEETTCEECCGGGHHHHHHHHSCTTSCEEEECSSH--HHHHHHHHHHHHTTCSC T ss_pred HHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCC--HHHHHHHHHHHHCCCCC T ss_conf 4789987599597999799789997493756003422230001045413332010256642--27999999999709987 Q ss_pred EEEECCCHHHHHHCCCCCCCCC Q ss_conf 0665279599987389413777 Q T0592 101 VKELIGGIEYWRKENGEVEGTL 122 (144) Q Consensus 101 v~~l~GG~~aW~~~G~pve~~~ 122 (144) |++|+||+.+|+++|+|||+.- T Consensus 80 V~~l~GG~~aW~~ag~PvE~e~ 101 (106) T 3hix_A 80 VSELKGGLAAWKAIGGPTELEH 101 (106) T ss_dssp EEECTTHHHHHHHTTCCEEECC T ss_pred EEECCCHHHHHHHCCCCEEEEC T ss_conf 8991692999998799857850 No 4 >3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A Probab=99.90 E-value=2.7e-24 Score=163.84 Aligned_cols=101 Identities=22% Similarity=0.350 Sum_probs=91.6 Q ss_pred CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH Q ss_conf 00179999999961898889986452223223234543333725655654200035753588852887305678999999 Q T0592 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFA 95 (144) Q Consensus 16 ~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~ 95 (144) -+|++.++++++.++ ++++|||||++.||..+|||||+|+|++++.. ....++++++||+||.+| .+|..++..|. T Consensus 2 ~~Is~~el~~~l~~~-~~~~liDvR~~~e~~~ghI~ga~~ip~~~l~~-~~~~l~~~~~vv~~C~~G--~rs~~aa~~L~ 77 (103) T 3eme_A 2 KSITTDELKNKLLES-KPVQIVDVRTDEETAMGYIPNAKLIPMDTIPD-NLNSFNKNEIYYIVCAGG--VRSAKVVEYLE 77 (103) T ss_dssp CEECHHHHHHGGGSS-SCCEEEECSCHHHHTTCBCTTCEECCGGGGGG-CGGGCCTTSEEEEECSSS--SHHHHHHHHHH T ss_pred CEECHHHHHHHHHCC-CCEEEEECCCHHHHHCCCCCCCCCCCCCCHHH-HHHHHCCCCCCEEECCCC--HHHHHHHHHHH T ss_conf 691799999998679-98299988882563357258861212200011-221101234510057996--54999999999 Q ss_pred HCCCCEEEECCCHHHHHHCCCCCCC Q ss_conf 7189806652795999873894137 Q T0592 96 QLGFRVKELIGGIEYWRKENGEVEG 120 (144) Q Consensus 96 ~~G~~v~~l~GG~~aW~~~G~pve~ 120 (144) ..||++++|.|||.+|+++|+|+|+ T Consensus 78 ~~G~~~~~l~GG~~~W~~~g~pve~ 102 (103) T 3eme_A 78 ANGIDAVNVEGGMHAWGDEGLEIKS 102 (103) T ss_dssp TTTCEEEEETTHHHHHCSSSCBCCC T ss_pred HCCCCEEEECCHHHHHHHCCCCCEE T ss_conf 8699779977819999987898502 No 5 >2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudomonas palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris CGA009} Probab=99.90 E-value=9.2e-24 Score=160.66 Aligned_cols=108 Identities=24% Similarity=0.373 Sum_probs=93.3 Q ss_pred CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCC-CCCCCCCCCCHHHHHHHH-------HHCCCCCCCEEEEECCCCCCHH Q ss_conf 00179999999961898889986452223223-234543333725655654-------2000357535888528873056 Q T0592 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKE-CHIPTAISIPGNKINEDT-------TKRLSKEKVIITYCWGPACNGA 87 (144) Q Consensus 16 ~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~-ghIpGAi~ip~~~l~~~~-------~~~l~~d~~iVvyC~~~~~~~s 87 (144) -+|++.++.++++.++++++|||||++.||.. ||||||+|+|...+.... ...++++++||+||.++ .+| T Consensus 22 ~~is~~e~~~~~~~~~~~~~lIDvR~~~E~~~~G~Ipga~~ip~~~l~~~~~~~~~~~~~~~~~~~~iv~~c~~g--~rs 99 (139) T 2hhg_A 22 ETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGG--LRS 99 (139) T ss_dssp EEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTTCCGGGGSSSEEEEECSSS--HHH T ss_pred CEECHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCC--HHH T ss_conf 899799999999779989799989985898973870564100100155432022111001236785799988998--169 Q ss_pred HHHHHHHHHCCCC-EEEECCCHHHHHHCCCCCCCCCCCC Q ss_conf 7899999971898-0665279599987389413777766 Q T0592 88 TKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEGTLGAK 125 (144) Q Consensus 88 ~~aa~~L~~~G~~-v~~l~GG~~aW~~~G~pve~~~~~~ 125 (144) ..++..|..+||+ |++|+|||.+|+++|+|+|+..+.+ T Consensus 100 ~~aa~~L~~~G~~nv~~l~GG~~~W~~~g~pve~~~p~~ 138 (139) T 2hhg_A 100 ALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAPKK 138 (139) T ss_dssp HHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC------ T ss_pred HHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCCCCCCC T ss_conf 999999998199988991585999998789876899999 No 6 >3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1} Probab=99.89 E-value=1.3e-23 Score=159.74 Aligned_cols=100 Identities=29% Similarity=0.371 Sum_probs=89.1 Q ss_pred CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH Q ss_conf 00179999999961898889986452223223234543333725655654200035753588852887305678999999 Q T0592 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFA 95 (144) Q Consensus 16 ~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~ 95 (144) -.|++.++.+.++ +++|||||++.||..+|||||+|+|.+++.. ....++++++||+||.+| .+|..++..|. T Consensus 4 k~I~a~el~~~~~----~~~liDvR~~~E~~~ghI~gA~~ip~~~l~~-~~~~l~~dk~ivvyC~~G--~rS~~aa~~L~ 76 (108) T 3gk5_A 4 RSINAADLYENIK----AYTVLDVREPFELIFGSIANSINIPISELRE-KWKILERDKKYAVICAHG--NRSAAAVEFLS 76 (108) T ss_dssp CEECHHHHHHTTT----TCEEEECSCHHHHTTCBCTTCEECCHHHHHH-HGGGSCTTSCEEEECSSS--HHHHHHHHHHH T ss_pred CCCCHHHHHHCCC----CCEEEECCCHHHHHCCCCCCCCCCCHHHHHH-HHHHHCCCCCEEEECCCC--HHHHHHHHHHH T ss_conf 4915999986279----9099989858999649178746483054788-876640588867888998--49999999999 Q ss_pred HCCCCEEEECCCHHHHHHCCCCCCCCC Q ss_conf 718980665279599987389413777 Q T0592 96 QLGFRVKELIGGIEYWRKENGEVEGTL 122 (144) Q Consensus 96 ~~G~~v~~l~GG~~aW~~~G~pve~~~ 122 (144) ..||+|++|.|||.+|+++|+|+.+.- T Consensus 77 ~~G~~v~~l~GG~~~W~~~g~Pvv~e~ 103 (108) T 3gk5_A 77 QLGLNIVDVEGGIQSWIEEGYPVVLEH 103 (108) T ss_dssp TTTCCEEEETTHHHHHHHTTCCCBCC- T ss_pred HCCCCEEEECCHHHHHHHCCCCEEEEC T ss_conf 859998997597999998799888845 No 7 >1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Probab=99.89 E-value=3.4e-23 Score=157.32 Aligned_cols=110 Identities=17% Similarity=0.299 Sum_probs=61.8 Q ss_pred CCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC--CCCCCEEEEECCCCCCHHHHHH Q ss_conf 57001799999999618988899864522232232345433337256556542000--3575358885288730567899 Q T0592 14 LSYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRL--SKEKVIITYCWGPACNGATKAA 91 (144) Q Consensus 14 ~~~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l--~~d~~iVvyC~~~~~~~s~~aa 91 (144) ....+++.++.+.+..+ ++++|||+|++.||..||||||+|+|.+++.... ..+ +++++||+||.++ .+|..++ T Consensus 128 ~~~~i~~~e~~~~~~~~-~~~~ilD~R~~~Ey~~ghIPGAi~ip~~eL~~~~-~~l~~d~~~~ivvyC~~g--~rs~~~~ 203 (539) T 1yt8_A 128 HTPSLAAEEVQALLDAR-AEAVILDARRFDEYQTMSIPGGISVPGAELVLRV-AELAPDPRTRVIVNCAGR--TRSIIGT 203 (539) T ss_dssp CCCEECHHHHHHHHHTT-CSEEEEECSCHHHHHHSBCTTCEECCGGGHHHHH-HHHCCSTTSEEEEECSSS--HHHHHHH T ss_pred CCCCCCHHHHHHHHHCC-CCEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHH-HHCCCCCCCEEEEECCCC--CCHHHHH T ss_conf 54436689999998607-8805734677666635678777347799999999-965889998199989999--6258999 Q ss_pred HHHHHCCC--CEEEECCCHHHHHHCCCCCCCCCCCCCC Q ss_conf 99997189--8066527959998738941377776643 Q T0592 92 AKFAQLGF--RVKELIGGIEYWRKENGEVEGTLGAKAD 127 (144) Q Consensus 92 ~~L~~~G~--~v~~l~GG~~aW~~~G~pve~~~~~~~~ 127 (144) ..|+.+|| +|++|+||+.+|+.+|+|+|.+.....+ T Consensus 204 ~~L~~~G~~~~V~~l~gG~~~W~~ag~~~e~g~~~~~~ 241 (539) T 1yt8_A 204 QSLLNAGIPNPVAALRNGTIGWTLAGQQLEHGQTRRFG 241 (539) T ss_dssp HHHHHTTCSSCEEEETTHHHHHHHTTCCCBCSCCCBCC T ss_pred HHHHHCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCC T ss_conf 99997699653134169899998779985468766678 No 8 >3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp} Probab=99.89 E-value=1.4e-23 Score=159.66 Aligned_cols=97 Identities=21% Similarity=0.302 Sum_probs=88.7 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH Q ss_conf 01799999999618988899864522232232345433337256556542000357535888528873056789999997 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQ 96 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~ 96 (144) +|++.++++++.++. +++|||||++.||..+|||||+|+|++++.. ....++++++||+||.+| .+|..++..|.. T Consensus 3 ~It~~el~~~l~~~~-~~~liDvR~~~E~~~ghI~ga~~ip~~~l~~-~~~~l~~~~~ivv~C~~G--~rs~~aa~~L~~ 78 (100) T 3foj_A 3 SITVTELKEKILDAN-PVNIVDVRTDQETAMGIIPGAETIPMNSIPD-NLNYFNDNETYYIICKAG--GRSAQVVQYLEQ 78 (100) T ss_dssp EECHHHHHHGGGSSS-CCEEEECSCHHHHTTCBCTTCEECCGGGGGG-CGGGSCTTSEEEEECSSS--HHHHHHHHHHHT T ss_pred CCCHHHHHHHHHCCC-CEEEEECCCHHHHHCCCCCCCCCCCHHHHHH-HCCCCCCCCEEEEECCCC--HHHHHHHHHHHH T ss_conf 948999999987699-8289979978999729378745484034455-312367886299987998--699999999998 Q ss_pred CCCCEEEECCCHHHHHHCCCC Q ss_conf 189806652795999873894 Q T0592 97 LGFRVKELIGGIEYWRKENGE 117 (144) Q Consensus 97 ~G~~v~~l~GG~~aW~~~G~p 117 (144) .||++++|+|||.+|+.+|+| T Consensus 79 ~G~~~~~l~GG~~~W~~~glp 99 (100) T 3foj_A 79 NGVNAVNVEGGMDEFGDEGLE 99 (100) T ss_dssp TTCEEEEETTHHHHHCSSSCB T ss_pred CCCCEEEECCHHHHHHHCCCC T ss_conf 599879977869999985899 No 9 >1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Probab=99.87 E-value=1e-21 Score=148.50 Aligned_cols=112 Identities=22% Similarity=0.402 Sum_probs=91.3 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCEEEEECCCCCCHHHHHHHHHH Q ss_conf 017999999996189888998645222322323454333372565565420003-5753588852887305678999999 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLS-KEKVIITYCWGPACNGATKAAAKFA 95 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~-~d~~iVvyC~~~~~~~s~~aa~~L~ 95 (144) .+++.++.++|..+ ++++|||||++.+|..||||||+|+|++.|.......++ ++++||+||+++ ..+.+++++|. T Consensus 8 ~~s~~~l~~~l~~~-~~i~liDvR~~~~y~~gHipgAv~iP~~~l~~~~~~l~~~~~~~IVlyd~~~--~~a~r~a~~L~ 84 (539) T 1yt8_A 8 VRTFHDIRAALLAR-RELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARVPRRDTPITVYDDGE--GLAPVAAQRLH 84 (539) T ss_dssp EECHHHHHHHHHHT-CCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHHHHHSCCTTSCEEEECSSS--SHHHHHHHHHH T ss_pred CCCHHHHHHHHHCC-CCEEEEECCCHHHHHCCCCCCCEECCHHHHHHHHHHHCCCCCCEEEEEECCC--CHHHHHHHHHH T ss_conf 68999999997579-9879998998789844889998877889999999984799998699997998--88999999999 Q ss_pred HCCCC-EEEECCCHHHHHHCCCCCCCCCCCCCCCCHH Q ss_conf 71898-0665279599987389413777766432021 Q T0592 96 QLGFR-VKELIGGIEYWRKENGEVEGTLGAKADLFWN 131 (144) Q Consensus 96 ~~G~~-v~~l~GG~~aW~~~G~pve~~~~~~~~~~~~ 131 (144) .+||+ |++|+||+.+|+++|+|++++...+...|.. T Consensus 85 ~~G~~~V~vL~GG~~aW~~~G~~~~~~~~~p~~~~~~ 121 (539) T 1yt8_A 85 DLGYSDVALLDGGLSGWRNAGGELFRDVNVPSKAFGE 121 (539) T ss_dssp HTTCSSEEEETTHHHHHHHTTCCCBCSSSHHHHHHHH T ss_pred HCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCC T ss_conf 7599777894787799997699742245422345442 No 10 >1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Probab=99.87 E-value=1.5e-22 Score=153.46 Aligned_cols=102 Identities=23% Similarity=0.352 Sum_probs=86.2 Q ss_pred CCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH-----------HHHHHHCCCCCCCEEEEECCC Q ss_conf 570017999999996189888998645222322323454333372565-----------565420003575358885288 Q T0592 14 LSYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKI-----------NEDTTKRLSKEKVIITYCWGP 82 (144) Q Consensus 14 ~~~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l-----------~~~~~~~l~~d~~iVvyC~~~ 82 (144) ....+++.++.+++++| .+|||||++.||..||||||+|+|+.++ .......++++++||+||.+| T Consensus 16 ~p~~v~~~~a~~l~~~g---~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~C~~G 92 (129) T 1tq1_A 16 VPSSVSVTVAHDLLLAG---HRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSG 92 (129) T ss_dssp CCEEEEHHHHHHHHHHT---CCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSC T ss_pred CCCCCCHHHHHHHHHCC---CEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC T ss_conf 99842899999999783---989979798999759678745164102220001333789999997559887799983875 Q ss_pred CCCHHHHHHHHHHHCCC-CEEEECCCHHHHHHCCCCCCC Q ss_conf 73056789999997189-806652795999873894137 Q T0592 83 ACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEG 120 (144) Q Consensus 83 ~~~~s~~aa~~L~~~G~-~v~~l~GG~~aW~~~G~pve~ 120 (144) .+|..++..|..+|| +|++|+||+.+|+++|+|||. T Consensus 93 --~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~glPvea 129 (129) T 1tq1_A 93 --GRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 129 (129) T ss_dssp --SHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC- T ss_pred --CHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCCCC T ss_conf --5179999999975998679830939999987698169 No 11 >1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3 Probab=99.86 E-value=1.3e-21 Score=147.83 Aligned_cols=104 Identities=19% Similarity=0.303 Sum_probs=89.5 Q ss_pred CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCC---CCCCCCCCHHHHHHHHH-HCCCCCCCEEEEECCCCCCHHHHHH Q ss_conf 0017999999996189888998645222322323---45433337256556542-0003575358885288730567899 Q T0592 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECH---IPTAISIPGNKINEDTT-KRLSKEKVIITYCWGPACNGATKAA 91 (144) Q Consensus 16 ~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~gh---IpGAi~ip~~~l~~~~~-~~l~~d~~iVvyC~~~~~~~s~~aa 91 (144) ..|+|.+++++|+++ ++++|||||++.||+.+| |+||+|+|.+.+..... ..++++++||+||.+| .+|..++ T Consensus 23 ~~Isp~e~~~~l~~~-~~~~lIDvR~~~E~~~~hip~i~~a~~ip~~~l~~~~~~~~~~~~~~ivvyC~~G--~rS~~aa 99 (137) T 1qxn_A 23 VMLSPKDAYKLLQEN-PDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLLAKSGLDPEKPVVVFCKTA--ARAALAG 99 (137) T ss_dssp EEECHHHHHHHHHHC-TTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHHHHHHCCCTTSCEEEECCSS--SCHHHHH T ss_pred CEECHHHHHHHHHCC-CCEEEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCC--CCHHHHH T ss_conf 797399999999749-5979997898899986076431477668703565656651478656545467999--7599999 Q ss_pred HHHHHCCCC-EEEECCCHHHHHHCCCCCCCCC Q ss_conf 999971898-0665279599987389413777 Q T0592 92 AKFAQLGFR-VKELIGGIEYWRKENGEVEGTL 122 (144) Q Consensus 92 ~~L~~~G~~-v~~l~GG~~aW~~~G~pve~~~ 122 (144) ..|..+||+ |++|+|||.+|+++|+|+.... T Consensus 100 ~~L~~~G~~nV~~l~GG~~~W~~~glP~v~k~ 131 (137) T 1qxn_A 100 KTLREYGFKTIYNSEGGMDKWLEEGLPSLDRS 131 (137) T ss_dssp HHHHHHTCSCEEEESSCHHHHHHTTCCEECCC T ss_pred HHHHHCCCCCEEEECCHHHHHHHCCCCCCCCC T ss_conf 99998599677980387999998799978765 No 12 >1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Probab=99.85 E-value=1e-21 Score=148.51 Aligned_cols=101 Identities=21% Similarity=0.404 Sum_probs=89.3 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH Q ss_conf 01799999999618988899864522232232345433337256556542000357535888528873056789999997 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQ 96 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~ 96 (144) .|++.++.++++++ +++|||||++.||..+|||||+|+|.+.+... ...++++++||+||.+| .+|..++..|.+ T Consensus 6 ~Is~~e~~~~l~~~--~~~liDvR~~~e~~~ghi~ga~~ip~~~l~~~-~~~~~~~~~iv~~C~~g--~rs~~aa~~l~~ 80 (108) T 1gmx_A 6 CINVADAHQKLQEK--EAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAF-MRDNDFDTPVMVMCYHG--NSSKGAAQYLLQ 80 (108) T ss_dssp EECHHHHHHHHHTT--CCEEEECSCHHHHHHCEETTCEECCHHHHHHH-HHHSCTTSCEEEECSSS--SHHHHHHHHHHH T ss_pred EECHHHHHHHHHCC--CEEEEECCCHHHHHCCCCCCCCCCCCHHHHHH-HHCCCCCCCEEEECCCC--HHHHHHHHHHHH T ss_conf 76899999999779--92899778789997296787553752114565-31367778747787997--289999999998 Q ss_pred CCCC-EEEECCCHHHHHHCCCCCCCCCC Q ss_conf 1898-06652795999873894137777 Q T0592 97 LGFR-VKELIGGIEYWRKENGEVEGTLG 123 (144) Q Consensus 97 ~G~~-v~~l~GG~~aW~~~G~pve~~~~ 123 (144) .||+ |++|+||+.+|++. +|++...| T Consensus 81 ~G~~~v~~l~GG~~~W~~~-~p~~~~~g 107 (108) T 1gmx_A 81 QGYDVVYSIDGGFEAWQRQ-FPAEVAYG 107 (108) T ss_dssp HTCSSEEEETTHHHHHHHH-CGGGEECC T ss_pred CCCCCEEEECCHHHHHHHC-CCCCCCCC T ss_conf 5997789931969999856-99752679 No 13 >1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Probab=99.85 E-value=1.7e-21 Score=147.22 Aligned_cols=112 Identities=24% Similarity=0.272 Sum_probs=92.3 Q ss_pred HCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH------------------HHHCCCCCCC Q ss_conf 5570017999999996189888998645222322323454333372565565------------------4200035753 Q T0592 13 KLSYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINED------------------TTKRLSKEKV 74 (144) Q Consensus 13 ~~~~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~------------------~~~~l~~d~~ 74 (144) ++.+-|+|.+|+++|.+ ++++|||+|++.+|..||||||+|+|++.+... ....++++++ T Consensus 6 ~~p~lvs~~~l~~~l~~--~~~viiD~R~~~~y~~gHIpGAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 83 (271) T 1e0c_A 6 SLPLVIEPADLQARLSA--PELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAV 83 (271) T ss_dssp TSCSEECHHHHHTTTTC--TTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCE T ss_pred CCCCEECHHHHHHHHCC--CCEEEEECCCHHHHHCCCCCCCEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE T ss_conf 89823779999998649--9849997899899964908997772825641368777765687268999999729999988 Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCC-EEEECCCHHHHHHCCCCCCCCCCCCCC Q ss_conf 58885288730567899999971898-066527959998738941377776643 Q T0592 75 IITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEGTLGAKAD 127 (144) Q Consensus 75 iVvyC~~~~~~~s~~aa~~L~~~G~~-v~~l~GG~~aW~~~G~pve~~~~~~~~ 127 (144) ||+||+++ ...+.++++.|+..||+ |++|+||+.+|+.+|+|++++...... T Consensus 84 vVvy~~~~-~~~a~r~~~~l~~~G~~~V~vL~GG~~aW~~~g~~~~~~~~~~~~ 136 (271) T 1e0c_A 84 YVVYDDEG-GGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPAPAG 136 (271) T ss_dssp EEEECSSS-SHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCCCCCC T ss_pred EEEEECCC-CHHHHHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCCCCCCCCCC T ss_conf 99996999-759999999999749885898458519999769933256777777 No 14 >2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis F11} Probab=99.84 E-value=2.2e-21 Score=146.45 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=88.0 Q ss_pred CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH---------------HH-----HHHCCCCCCC Q ss_conf 700179999999961898889986452223223234543333725655---------------65-----4200035753 Q T0592 15 SYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKIN---------------ED-----TTKRLSKEKV 74 (144) Q Consensus 15 ~~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~---------------~~-----~~~~l~~d~~ 74 (144) +-.|+|.|++++|.++ ++++|||||++.||..+|||+|+++|...+. .. ....++++++ T Consensus 4 ag~itP~ea~~~L~~~-~~~vlIDVR~~~E~~~~~ip~a~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (148) T 2fsx_A 4 AGDITPLQAWEMLSDN-PRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPADADQHERP 82 (148) T ss_dssp SEEECHHHHHHHHHHC-TTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC-------CC T ss_pred CCCCCHHHHHHHHHCC-CCEEEEECCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE T ss_conf 7758999999999749-694999788867722533355302562010011045543337478888888875125899986 Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCC-CEEEECCCHH------------HHHHCCCCCCCCCCC Q ss_conf 5888528873056789999997189-8066527959------------998738941377776 Q T0592 75 IITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIE------------YWRKENGEVEGTLGA 124 (144) Q Consensus 75 iVvyC~~~~~~~s~~aa~~L~~~G~-~v~~l~GG~~------------aW~~~G~pve~~~~~ 124 (144) ||+||.+| .+|..++..|..+|| +|++|.|||. +|+.+|+|++++..- T Consensus 83 Ivv~C~~G--~rS~~aa~~L~~~G~~nv~~l~GG~eg~~~~~~~~~~~gW~~~gLP~~~g~~~ 143 (148) T 2fsx_A 83 VIFLCRSG--NRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGRSH 143 (148) T ss_dssp EEEECSSS--STHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC--- T ss_pred EEEECCCC--HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC T ss_conf 99987988--78999999999759634799569856765212376849899876960458777 No 15 >3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Probab=99.84 E-value=4.1e-21 Score=144.90 Aligned_cols=100 Identities=21% Similarity=0.386 Sum_probs=85.7 Q ss_pred CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH------------HHCCCCCCCEEEEECCCC Q ss_conf 00179999999961898889986452223223234543333725655654------------200035753588852887 Q T0592 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDT------------TKRLSKEKVIITYCWGPA 83 (144) Q Consensus 16 ~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~------------~~~l~~d~~iVvyC~~~~ 83 (144) -.+++.++.+++..++++++|||||++.||..+|||||+|+|+.++.... ...++++++||+||.++ T Consensus 23 ~~~~~~~l~~l~~~~d~~~~lvDvR~~~ey~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g- 101 (139) T 3d1p_A 23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCASG- 101 (139) T ss_dssp EECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEECSSS- T ss_pred CEECHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCC- T ss_conf 1736999999985689598999798889997296798886661013210138989999998740688897588867888- Q ss_pred CCHHHHHHHHHHHCCCC-EEEECCCHHHHHHCCCC Q ss_conf 30567899999971898-06652795999873894 Q T0592 84 CNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGE 117 (144) Q Consensus 84 ~~~s~~aa~~L~~~G~~-v~~l~GG~~aW~~~G~p 117 (144) .+|..++..|..+||+ |++|+|||.+|.++|.. T Consensus 102 -~rs~~~a~~L~~~G~~~v~~l~GG~~~W~~~gg~ 135 (139) T 3d1p_A 102 -KRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGD 135 (139) T ss_dssp -HHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGG T ss_pred -CCHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCC T ss_conf -8089999999985998879966809999986898 No 16 >1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A Probab=99.83 E-value=3.5e-21 Score=145.30 Aligned_cols=109 Identities=8% Similarity=0.096 Sum_probs=89.4 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH------------HHHHH--HCCCCCCCEEEEECCC Q ss_conf 017999999996189888998645222322323454333372565------------56542--0003575358885288 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKI------------NEDTT--KRLSKEKVIITYCWGP 82 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l------------~~~~~--~~l~~d~~iVvyC~~~ 82 (144) .+++.|+.++|.++ ++++|||||+++||..+|||+++|+|...+ ..... ...+++++||+||.++ T Consensus 6 s~Sa~ea~~~L~~~-~~~~lIDVR~~~E~~~~~ip~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~iv~~C~~G 84 (134) T 1vee_A 6 SGSAKNAYTKLGTD-DNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKFD 84 (134) T ss_dssp BCCHHHHHHHHHHC-TTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHHHHHHHTTCSCGGGCEEEEECSSS T ss_pred CCCHHHHHHHHHHC-CCEEEEECCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC T ss_conf 87999999999718-88499978888993356752102453032201000265557788887650466788378896886 Q ss_pred CCCHHHHHHHHHHHCCCC-EEEECCCH---HHHHHCCCCCCCCCCCCCCC Q ss_conf 730567899999971898-06652795---99987389413777766432 Q T0592 83 ACNGATKAAAKFAQLGFR-VKELIGGI---EYWRKENGEVEGTLGAKADL 128 (144) Q Consensus 83 ~~~~s~~aa~~L~~~G~~-v~~l~GG~---~aW~~~G~pve~~~~~~~~~ 128 (144) .+|..++..|..+||+ |++|.||| .+|+++|+|+...+....+. T Consensus 85 --~rS~~aa~~L~~~G~~nv~~l~GG~~g~~~W~~~glP~~~~~~~~~~~ 132 (134) T 1vee_A 85 --GNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTSGPS 132 (134) T ss_dssp --TTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCCCCCCC T ss_pred --CHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCC T ss_conf --302789999998657966995797545599998699805886788999 No 17 >3ipo_A Putative thiosulfate sulfurtransferase YNJE; triple-domain rhodanese; HET: PE4; 2.40A {Escherichia coli k-12} PDB: 3ipp_A Probab=99.82 E-value=3.2e-20 Score=139.55 Aligned_cols=107 Identities=21% Similarity=0.203 Sum_probs=86.9 Q ss_pred CCCHHHHHHHHHCCC------CCEEEEECC--CCCCCCCCCCCCCCCCCHHHHH-------------HHHHH--CCCCCC Q ss_conf 017999999996189------888998645--2223223234543333725655-------------65420--003575 Q T0592 17 ETDIADLSIDIKKGY------EGIIVVDVR--DAEAYKECHIPTAISIPGNKIN-------------EDTTK--RLSKEK 73 (144) Q Consensus 17 ~i~~~el~~~l~~g~------~~~vlIDvR--~~~ey~~ghIpGAi~ip~~~l~-------------~~~~~--~l~~d~ 73 (144) .++|..+++.+..+. .+++||||| ++.+|.+||||||++++++.+. ..... .+++++ T Consensus 126 ~vs~~~l~~~~~~~~~~~~~~~~~~v~dv~~~~~~ey~~gHIPgA~~~~~~~~~~~~~~~~~~~~~l~~~l~~lGi~~~~ 205 (416) T 3ipo_A 126 LVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDT 205 (416) T ss_dssp EECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTTC T ss_pred EECHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC T ss_conf 12899999986188741025897289993689989997276899465275223357777789999999999974999989 Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCC-EEEECCCHHHHHHCCCCCCCCCCCC Q ss_conf 358885288730567899999971898-0665279599987389413777766 Q T0592 74 VIITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEGTLGAK 125 (144) Q Consensus 74 ~iVvyC~~~~~~~s~~aa~~L~~~G~~-v~~l~GG~~aW~~~G~pve~~~~~~ 125 (144) +||+||.+ +.+|.++++.|...||+ |++|+||+.+|+++|+|++++.... T Consensus 206 ~VVvy~~~--~~~a~~~~~~l~~~G~~~v~vL~GG~~~W~~~g~p~~~~~~~~ 256 (416) T 3ipo_A 206 TVILYGRD--VYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPK 256 (416) T ss_dssp EEEEECSS--HHHHHHHHHHHHHHTCSCEEEETTCHHHHHHHTCCCBCSSCCC T ss_pred EEEEEECC--CHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCCCCCCC T ss_conf 89999089--6189999999997699874780673899997699733688876 No 18 >2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Helicobacter pylori 26695} Probab=99.82 E-value=3.7e-21 Score=145.19 Aligned_cols=92 Identities=26% Similarity=0.335 Sum_probs=79.0 Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH-CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHH Q ss_conf 9888998645222322323454333372565565420-003575358885288730567899999971898066527959 Q T0592 31 YEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTK-RLSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIE 109 (144) Q Consensus 31 ~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~-~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~ 109 (144) .++++|||||++.||..+|||||+|+|+.++...... ..+++++||+||.+| .+|..++..|..+||++.+|.||+. T Consensus 14 ~~d~~liDvR~~~e~~~ghI~ga~nip~~~~~~~~~~~~~~k~~~iv~~C~~G--~rS~~aa~~L~~~G~~~v~l~GG~~ 91 (110) T 2k0z_A 14 FNDFIVVDVRELDEYEELHLPNATLISVNDQEKLADFLSQHKDKKVLLHCRAG--RRALDAAKSMHELGYTPYYLEGNVY 91 (110) T ss_dssp GGGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHHHHHHSCSSSCEEEECSSS--HHHHHHHHHHHHTTCCCEEEESCGG T ss_pred CCCEEEEECCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCC--HHHHHHHHHHHHCCCCEEEECCHHH T ss_conf 99969998998899972967874458504567758762446798889989998--3899999999985998899568499 Q ss_pred HHHHCCCCCCCCCCC Q ss_conf 998738941377776 Q T0592 110 YWRKENGEVEGTLGA 124 (144) Q Consensus 110 aW~~~G~pve~~~~~ 124 (144) +|+++|+|+++.+.. T Consensus 92 ~w~~~g~pi~~~d~~ 106 (110) T 2k0z_A 92 DFEKYGFRMVYDDTC 106 (110) T ss_dssp GTTTTTCCCBCCCSS T ss_pred HHHHCCCCEEECCCC T ss_conf 999879999768878 No 19 >3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, structural genomics; 2.10A {Mycobacterium tuberculosis} Probab=99.82 E-value=6.3e-20 Score=137.83 Aligned_cols=107 Identities=22% Similarity=0.272 Sum_probs=86.3 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCC-CCCCCCCCCCCCCCCCHHHH--------------HHHHH--HCCCCCCCEEEEE Q ss_conf 0179999999961898889986452-22322323454333372565--------------56542--0003575358885 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRD-AEAYKECHIPTAISIPGNKI--------------NEDTT--KRLSKEKVIITYC 79 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~-~~ey~~ghIpGAi~ip~~~l--------------~~~~~--~~l~~d~~iVvyC 79 (144) -+++..|++.|. +++++|||+|+ ..+|.++|||||+++++... ..... ..+.++++||+|+ T Consensus 41 lVs~~wL~~~L~--~~~vvIlD~r~~~~~Y~~gHIPGAv~id~~~~~~~~~~~~lp~~e~~~~~l~~lGI~~~~~VVvY~ 118 (318) T 3hzu_A 41 LVTADWLSAHMG--APGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG 118 (318) T ss_dssp EECHHHHHHHTT--CTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC T ss_pred EECHHHHHHHCC--CCCEEEEECCCCHHHHHHCCCCCCEECCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEE T ss_conf 464999998708--989799989999889971869997671855543599887899999999998750566896599993 Q ss_pred CCCCCCHHHHHHHHHHHCCCC-EEEECCCHHHHHHCCCCCCCCCCCCC Q ss_conf 288730567899999971898-06652795999873894137777664 Q T0592 80 WGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEGTLGAKA 126 (144) Q Consensus 80 ~~~~~~~s~~aa~~L~~~G~~-v~~l~GG~~aW~~~G~pve~~~~~~~ 126 (144) +++ ...+.+++|.|+.+|++ |++|+||+.+|+++|+|+++...... T Consensus 119 ~~~-~~~A~R~~w~L~~~G~~~V~vLdGG~~aW~~~g~~v~~~~~~~~ 165 (318) T 3hzu_A 119 DKS-NWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKT 165 (318) T ss_dssp SGG-GHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCCCCC T ss_pred CCC-CCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCCCCCCCCCCC T ss_conf 567-74789999999965998610358747999842503246776543 No 20 >1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} Probab=99.81 E-value=1.4e-20 Score=141.64 Aligned_cols=92 Identities=22% Similarity=0.263 Sum_probs=80.2 Q ss_pred CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH Q ss_conf 00179999999961898889986452223223234543333725655654200035753588852887305678999999 Q T0592 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFA 95 (144) Q Consensus 16 ~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~ 95 (144) -+|+|.++.++++++ ++|||||+++||..+|||||+|+|++++... ...+ ++++||+||.++ .+|..++..|. T Consensus 2 k~I~peel~~~l~~~---~~liDvR~~~e~~~ghI~ga~~ip~~~~~~~-~~~~-~~~~ivv~C~~g--~rs~~aa~~L~ 74 (94) T 1wv9_A 2 RKVRPEELPALLEEG---VLVVDVRPADRRSTPLPFAAEWVPLEKIQKG-EHGL-PRRPLLLVCEKG--LLSQVAALYLE 74 (94) T ss_dssp CEECGGGHHHHHHTT---CEEEECCCC--CCSCCSSCCEECCHHHHTTT-CCCC-CSSCEEEECSSS--HHHHHHHHHHH T ss_pred CEECHHHHHHHHHCC---CEEEECCCHHHHHHCCCCCCCCCCCCCCCCC-CCCC-CCEEEEEEECCC--CCHHHHHHHHH T ss_conf 592999999998779---9899732688874236676422111122223-4546-521799995676--40999999999 Q ss_pred HCCCCEEEECCCHHHHHHC Q ss_conf 7189806652795999873 Q T0592 96 QLGFRVKELIGGIEYWRKE 114 (144) Q Consensus 96 ~~G~~v~~l~GG~~aW~~~ 114 (144) +.||++++|.|||.+|.++ T Consensus 75 ~~G~~~~~l~GGi~aw~e~ 93 (94) T 1wv9_A 75 AEGYEAMSLEGGLQALTQG 93 (94) T ss_dssp HHTCCEEEETTGGGCC--- T ss_pred HCCCCEEEECCHHHHHHCC T ss_conf 8799399966479998755 No 21 >1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 Probab=99.81 E-value=4.4e-20 Score=138.76 Aligned_cols=106 Identities=16% Similarity=0.160 Sum_probs=85.3 Q ss_pred CCCCHHHHHHHHHCCCCCEEEEECC--------CCCCCCCCCCCCCCCCCHHH--------------------HHHH-HH Q ss_conf 0017999999996189888998645--------22232232345433337256--------------------5565-42 Q T0592 16 YETDIADLSIDIKKGYEGIIVVDVR--------DAEAYKECHIPTAISIPGNK--------------------INED-TT 66 (144) Q Consensus 16 ~~i~~~el~~~l~~g~~~~vlIDvR--------~~~ey~~ghIpGAi~ip~~~--------------------l~~~-~~ 66 (144) .-|+|.+|++.|. +++|||+| ..++|.+||||||++++++. |... .. T Consensus 14 ~lVsp~~L~~~L~----d~~IlD~R~~l~~~~~g~~~Y~~gHIPGAi~idl~~~ls~~~~~~~~~~~LP~~~~f~~~l~~ 89 (373) T 1okg_A 14 VFLDPSEVADHLA----EYRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA 89 (373) T ss_dssp CEECHHHHTTCGG----GSEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH T ss_pred EEECHHHHHHHCC----CCEEEEEECCCCCCCCHHHHHHHCCCCCCEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH T ss_conf 0657999997568----997999327678886319999858499986769767645688888988889799999999996 Q ss_pred HCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCCCC Q ss_conf 00035753588852887305678999999718980665279599987389413777766 Q T0592 67 KRLSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWRKENGEVEGTLGAK 125 (144) Q Consensus 67 ~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~~~G~pve~~~~~~ 125 (144) ..+.++++||+||++.+...+.+++|.|+..|++|++|+||+.+|+++|+|++++.... T Consensus 90 lGI~~dt~VVvYd~~~g~~~a~R~~w~L~~~G~~V~vLdGG~~aW~~aG~pvet~~p~~ 148 (373) T 1okg_A 90 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGADAYVINGGFQACKAAGLEMESGEPSS 148 (373) T ss_dssp TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTCCEEEETTTTHHHHTTTCCEECSCCCS T ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCCC T ss_conf 39899897999989999728999999998568607993796699987689754588722 No 22 >3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodanese, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Probab=99.80 E-value=1.2e-19 Score=136.21 Aligned_cols=95 Identities=20% Similarity=0.324 Sum_probs=84.8 Q ss_pred CCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHH Q ss_conf 57001799999999618988899864522232232345433337256556542000357535888528873056789999 Q T0592 14 LSYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAK 93 (144) Q Consensus 14 ~~~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~ 93 (144) ....|.+.|+.+.+.++ .+|||||+++||+.+|||||+|||+++|.. +..++|+|++||+||..| .||-.|+.. T Consensus 487 ~~~~~~~~~~~~~~~~~---~~~~Dvr~~~e~~~~~i~~~~~ipl~~lr~-~~~e~~~~~~~~~~c~~g--~r~~~a~~~ 560 (588) T 3ics_A 487 FVDTVQWHEIDRIVENG---GYLIDVREPNELKQGMIKGSINIPLDELRD-RLEEVPVDKDIYITCQLG--MRGYVAARM 560 (588) T ss_dssp SCCEECTTTHHHHHHTT---CEEEECSCGGGGGGCBCTTEEECCHHHHTT-CGGGSCSSSCEEEECSSS--HHHHHHHHH T ss_pred CCCCCCHHHHHHHHHCC---CEEEECCCHHHHHCCCCCCCEECCHHHHHH-HHHHCCCCCCEEEECCCC--HHHHHHHHH T ss_conf 85524799999875089---889989997887358889977578999988-772089988299992887--239999999 Q ss_pred HHHCCCCEEEECCCHHHHHHC Q ss_conf 997189806652795999873 Q T0592 94 FAQLGFRVKELIGGIEYWRKE 114 (144) Q Consensus 94 L~~~G~~v~~l~GG~~aW~~~ 114 (144) |...||+|++|+|||..|... T Consensus 561 L~~~g~~~~~~~gg~~~~~~~ 581 (588) T 3ics_A 561 LMEKGYKVKNVDGGFKLYGTV 581 (588) T ss_dssp HHHTTCCEEEETTHHHHHHHH T ss_pred HHHCCCCEEEEECCHHHHHHH T ss_conf 987899689960768999875 No 23 >1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Probab=99.80 E-value=3.8e-21 Score=145.07 Aligned_cols=107 Identities=15% Similarity=0.195 Sum_probs=83.5 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH---HCCCCCCCEEEEECCCCCCHHHHHH-- Q ss_conf 01799999999618988899864522232232345433337256556542---0003575358885288730567899-- Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTT---KRLSKEKVIITYCWGPACNGATKAA-- 91 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~---~~l~~d~~iVvyC~~~~~~~s~~aa-- 91 (144) .|++.++.++++ +++++|||||+++||+.||||||+|+|.+.+..... ..+.+++.+|+||..+. .++..+. T Consensus 29 ~Is~~el~~~~~--~~~v~iIDvR~~~ey~~GHIpgAinip~~~l~~~~~~l~~~~~~~~~~v~~c~~~~-~~~~~a~~~ 105 (152) T 1t3k_A 29 YITSTQLLPLHR--RPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHSALSQ-VRGPTCARR 105 (152) T ss_dssp EECTTTTTTCCC--CTTEEEEEESCSHHHHSSCCCSSEEECCSSSSTTHHHHHHTCCSCCEEEESSSCCS-SSHHHHHHH T ss_pred EECHHHHHHHHH--CCCEEEEECCCHHHHCCCEEEECCEEEECHHHHHHHHHHHHCCCCCCEEEEECCCC-CHHHHHHHH T ss_conf 668999999862--89989998556453204503101102200000136776420034441257878887-338889998 Q ss_pred ------HHHHHCCCC-EEEECCCHHHHHHCCCCCCCCCCCCC Q ss_conf ------999971898-06652795999873894137777664 Q T0592 92 ------AKFAQLGFR-VKELIGGIEYWRKENGEVEGTLGAKA 126 (144) Q Consensus 92 ------~~L~~~G~~-v~~l~GG~~aW~~~G~pve~~~~~~~ 126 (144) +.|..+||+ |++|+|||.+|+++|+||.+....+. T Consensus 106 ~~~~~~~~l~~~G~~nV~~L~GG~~~W~~~G~Pv~~~~~~p~ 147 (152) T 1t3k_A 106 LVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAEVPC 147 (152) T ss_dssp HHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSCSSC T ss_pred HHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCCCC T ss_conf 888878899876998189958939999887998225899989 No 24 >3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens} Probab=99.80 E-value=3.8e-20 Score=139.15 Aligned_cols=95 Identities=21% Similarity=0.383 Sum_probs=79.9 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH----------------HHCCCCCCCEEEEEC Q ss_conf 0179999999961898889986452223223234543333725655654----------------200035753588852 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDT----------------TKRLSKEKVIITYCW 80 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~----------------~~~l~~d~~iVvyC~ 80 (144) +|++.|++++++++ ++++|||||++.||+.+|||||+|+|+.++.... ....+++++||+||. T Consensus 2 rIs~~e~~~~l~~~-~~~viiDvR~~~e~~~ghIpgAvniP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~ 80 (127) T 3i2v_A 2 RVSVTDYKRLLDSG-AFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVICK 80 (127) T ss_dssp EECHHHHHHHHHHT-CCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHHTTC---CCEEEEEECS T ss_pred CCCHHHHHHHHHCC-CCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECC T ss_conf 54999999999779-98199976888882057667742277889887521101101235788887640367866999889 Q ss_pred CCCCCHHHHHHHHHHHCCCC-------EEEECCCHHHHHHC Q ss_conf 88730567899999971898-------06652795999873 Q T0592 81 GPACNGATKAAAKFAQLGFR-------VKELIGGIEYWRKE 114 (144) Q Consensus 81 ~~~~~~s~~aa~~L~~~G~~-------v~~l~GG~~aW~~~ 114 (144) +| .+|..++..|..+||+ |++|+|||.+|+++ T Consensus 81 ~G--~rs~~a~~~L~~~G~~~~~~~~~v~~l~GG~~~W~~~ 119 (127) T 3i2v_A 81 LG--NDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAK 119 (127) T ss_dssp SS--SHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHH T ss_pred CC--CHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHH T ss_conf 98--3699999999983983335886779965879999875 No 25 >3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A* Probab=99.80 E-value=1.8e-19 Score=135.10 Aligned_cols=111 Identities=26% Similarity=0.297 Sum_probs=80.1 Q ss_pred CCCCHHHHHHHHHCC-----CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH-------------HHCCCCCCCEEE Q ss_conf 001799999999618-----98889986452223223234543333725655654-------------200035753588 Q T0592 16 YETDIADLSIDIKKG-----YEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDT-------------TKRLSKEKVIIT 77 (144) Q Consensus 16 ~~i~~~el~~~l~~g-----~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~-------------~~~l~~d~~iVv 77 (144) ..|+|.+|+++|++| .++++|||||+ .||..||||||+|+|.+.+.... .....+++.||+ T Consensus 31 ~~I~p~~L~~~l~~g~~~~~~~~~~IIDVR~-~ey~~gHIpGAiniP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vV~ 109 (169) T 3f4a_A 31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLEKQADGRGALNVIF 109 (169) T ss_dssp EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHHHHHHHHHHHHHHHHTSSSCEEEEE T ss_pred CCCCHHHHHHHHHHCCCCCCCCCEEEEECCH-HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE T ss_conf 7559999999998077666678759996873-798768524333368267665232103666666554300478955888 Q ss_pred EECCCCCCHHHHHHHHHH------HCCC-CEEEECCCHHHHHHCCCCCC-CCCCCCCCC Q ss_conf 852887305678999999------7189-80665279599987389413-777766432 Q T0592 78 YCWGPACNGATKAAAKFA------QLGF-RVKELIGGIEYWRKENGEVE-GTLGAKADL 128 (144) Q Consensus 78 yC~~~~~~~s~~aa~~L~------~~G~-~v~~l~GG~~aW~~~G~pve-~~~~~~~~~ 128 (144) ||.++. .++..++..+. ..|| +|++|+|||.+|++.+.+.+ -.++...++ T Consensus 110 yc~~s~-~r~~~aA~~~~~~l~~~g~g~~~V~vL~GG~~~W~~~yg~~~~~~e~y~~~~ 167 (169) T 3f4a_A 110 HCMLSQ-QRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDESVTAGYLPDL 167 (169) T ss_dssp ECSSSS-SHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTTTEESCCGGG T ss_pred EECCCC-CHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCHHH T ss_conf 826898-3799999999999777249997689978709999987299855257878454 No 26 >2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Thermus thermophilus HB8} PDB: 2eg3_A Probab=99.79 E-value=8.7e-20 Score=136.99 Aligned_cols=87 Identities=21% Similarity=0.336 Sum_probs=75.6 Q ss_pred CCEEEEECCCCCCCC----------CCCCCCCCCCCHHHHHHH--H--HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC Q ss_conf 888998645222322----------323454333372565565--4--20003575358885288730567899999971 Q T0592 32 EGIIVVDVRDAEAYK----------ECHIPTAISIPGNKINED--T--TKRLSKEKVIITYCWGPACNGATKAAAKFAQL 97 (144) Q Consensus 32 ~~~vlIDvR~~~ey~----------~ghIpGAi~ip~~~l~~~--~--~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~ 97 (144) ++++|||+|++.||. .||||||+|+|+.++... . ...++++++||+||.+| .+|..++..|+.+ T Consensus 130 ~~~~lvD~R~~~ef~G~~~~~~~~~~GhIpGA~nip~~~~~~~~~~~~~~~i~~~~~vivyC~sG--~ra~~~~~~L~~~ 207 (230) T 2eg4_A 130 RHPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPEGLLERLGLQPGQEVGVYCHSG--ARSAVAFFVLRSL 207 (230) T ss_dssp TCSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCTTHHHHHTCCTTCEEEEECSSS--HHHHHHHHHHHHT T ss_pred CCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCEEECCHHCCCCCCCCHHCCCCCCCEEEEECCCC--HHHHHHHHHHHHC T ss_conf 74389715898984674668764412124786552330001223010003689998499988986--8999999999986 Q ss_pred CCCEEEECCCHHHHHHCCCCCCC Q ss_conf 89806652795999873894137 Q T0592 98 GFRVKELIGGIEYWRKENGEVEG 120 (144) Q Consensus 98 G~~v~~l~GG~~aW~~~G~pve~ 120 (144) ||+|++|+||+..|.++|+|||. T Consensus 208 G~~v~~ydGs~~eW~~~glPvep 230 (230) T 2eg4_A 208 GVRARNYLGSMHEWLQEGLPTEP 230 (230) T ss_dssp TCEEEECSSHHHHHHHTTCCCBC T ss_pred CCCEEEECCCHHHHHHCCCCCCC T ss_conf 99869905849999867999999 No 27 >1uar_A Rhodanese; sulfurtransferase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 Probab=99.78 E-value=1.1e-19 Score=136.40 Aligned_cols=105 Identities=19% Similarity=0.191 Sum_probs=85.6 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECC-CCCCCCCCCCCCCCCCCHHHH-H-------------HHH--HHCCCCCCCEEEEE Q ss_conf 017999999996189888998645-222322323454333372565-5-------------654--20003575358885 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVR-DAEAYKECHIPTAISIPGNKI-N-------------EDT--TKRLSKEKVIITYC 79 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR-~~~ey~~ghIpGAi~ip~~~l-~-------------~~~--~~~l~~d~~iVvyC 79 (144) =+++..|.+.|.+ ++++|||+| +.++|.++|||||+++|+... . ... ...++++++||+|| T Consensus 9 lVs~~~L~~~l~~--~~v~IlD~r~~~~~y~~gHIPGAv~~~~~~~~~~~~~~~lp~~~~~~~~l~~lGI~~~~~VViY~ 86 (285) T 1uar_A 9 LVSTDWVQEHLED--PKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYG 86 (285) T ss_dssp EECHHHHHTTTTC--TTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC T ss_pred EEEHHHHHHHHCC--CCEEEEECCCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE T ss_conf 1809999987189--98699989998788973839998188952424587532444399998776451246863389982 Q ss_pred CCCCCCHHHHHHHHHHHCCCC-EEEECCCHHHHHHCCCCCCCCCCC Q ss_conf 288730567899999971898-066527959998738941377776 Q T0592 80 WGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEGTLGA 124 (144) Q Consensus 80 ~~~~~~~s~~aa~~L~~~G~~-v~~l~GG~~aW~~~G~pve~~~~~ 124 (144) +++ +..+++++|.|..+||+ |++|+||+.+|+.+|+|++++... T Consensus 87 ~~~-~~~a~R~~w~L~~~G~~~V~vL~GG~~~W~~~g~~~~~~~~~ 131 (285) T 1uar_A 87 DKN-NWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVPS 131 (285) T ss_dssp HHH-HHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCCC T ss_pred CCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCCCCC T ss_conf 145-740378999999618603898514037777624853357774 No 28 >3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, structural genomics; HET: PGE; 1.76A {Clostridium difficile 630} Probab=99.77 E-value=1.5e-19 Score=135.63 Aligned_cols=95 Identities=27% Similarity=0.381 Sum_probs=73.7 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH--------------------------------- Q ss_conf 01799999999618988899864522232232345433337256556--------------------------------- Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINE--------------------------------- 63 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~--------------------------------- 63 (144) .|++.++.++|+. ++++|||||++.||..||||||+|+|+..+.. T Consensus 3 ~is~~~l~~~l~~--~~~vlIDvR~~~ey~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 80 (134) T 3g5j_A 3 AMSVIKIEKALKL--DKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYL 80 (134) T ss_dssp --CEECHHHHTTC--TTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHHH T ss_pred CCCHHHHHHHHCC--CCCEEEECCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH T ss_conf 5489999998648--99989989598999729978775662443454113463111234577764021112034899999 Q ss_pred HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHC Q ss_conf 542000357535888528873056789999997189806652795999873 Q T0592 64 DTTKRLSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWRKE 114 (144) Q Consensus 64 ~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~~~ 114 (144) ......++.+.+|+||..+ +.+|..+++.|..+||+|++|+|||++|++. T Consensus 81 ~~~~~~~~~~~~iv~~~~~-g~rS~~a~~~L~~~G~~v~~l~GG~~awk~~ 130 (134) T 3g5j_A 81 QAAELALNYDNIVIYCARG-GMRSGSIVNLLSSLGVNVYQLEGGYKAYRNF 130 (134) T ss_dssp HHHHHHTTCSEEEEECSSS-SHHHHHHHHHHHHTTCCCEEETTHHHHHHHH T ss_pred HHHHHCCCCCCEEEEECCC-CCHHHHHHHHHHHCCCCEEEECCHHHHHHHH T ss_conf 9875224678659997898-7379999999998499888964829999998 No 29 >1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A Probab=99.76 E-value=1.1e-18 Score=130.37 Aligned_cols=113 Identities=20% Similarity=0.247 Sum_probs=89.1 Q ss_pred CCCCHHHHHHHHHCC--CCCEEEEECC--------CCCCCCCCCCCCCCCCCHHHHHHH------------------HHH Q ss_conf 001799999999618--9888998645--------222322323454333372565565------------------420 Q T0592 16 YETDIADLSIDIKKG--YEGIIVVDVR--------DAEAYKECHIPTAISIPGNKINED------------------TTK 67 (144) Q Consensus 16 ~~i~~~el~~~l~~g--~~~~vlIDvR--------~~~ey~~ghIpGAi~ip~~~l~~~------------------~~~ 67 (144) .-+++..|.+.|+++ +++++|||+| ..++|.+||||||++++++.+... ... T Consensus 8 ~LVs~~wL~~~l~~~~~~~~~~IlD~r~~~~~~~~~~~~Y~~gHIPGAi~~d~~~~~~~~~~~~~~~p~~~~~~~~l~~~ 87 (296) T 1rhs_A 8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSL 87 (296) T ss_dssp SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHHT T ss_pred CCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHH T ss_conf 85169999998735688999799981377888833699998570789678886895688877776688777999999843 Q ss_pred CCCCCCCEEEEECCC-CCCHHHHHHHHHHHCCC-CEEEECCCHHHHHHCCCCCCCCCCCCCCC Q ss_conf 003575358885288-73056789999997189-80665279599987389413777766432 Q T0592 68 RLSKEKVIITYCWGP-ACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLGAKADL 128 (144) Q Consensus 68 ~l~~d~~iVvyC~~~-~~~~s~~aa~~L~~~G~-~v~~l~GG~~aW~~~G~pve~~~~~~~~~ 128 (144) .+..+++||+|.+.. +...+.+++|.|...|+ +|++|+||+.+|+.+|+|++++....... T Consensus 88 Gi~~~~~VVvy~~~~~~~~~a~R~~w~L~~~G~~~v~iLdGG~~aW~~~g~p~~~~~~~~~~~ 150 (296) T 1rhs_A 88 GISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPA 150 (296) T ss_dssp TCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCCCCCCC T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCC T ss_conf 247984599944776652688899999987497507990583687763112234456533675 No 30 >2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major} Probab=99.76 E-value=7.9e-19 Score=131.30 Aligned_cols=101 Identities=24% Similarity=0.265 Sum_probs=76.1 Q ss_pred CCCHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHC----C--CCCCCEEEEECCCCCCHHH Q ss_conf 017999999996189--8889986452223223234543333725655654200----0--3575358885288730567 Q T0592 17 ETDIADLSIDIKKGY--EGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKR----L--SKEKVIITYCWGPACNGAT 88 (144) Q Consensus 17 ~i~~~el~~~l~~g~--~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~----l--~~d~~iVvyC~~~~~~~s~ 88 (144) .|+|.++.++|+++. ++++|||||+ .||..||||||+|+|...+.....+. + .+...+|+||..++ .++. T Consensus 6 ~Isp~eL~~ll~~~~~~~~v~IIDvR~-~Ey~~GHI~GAinip~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~s~-~rg~ 83 (152) T 2j6p_A 6 YIKPEELVELLDNPDSLVKAAVIDCRD-SDRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEKKELAVFHCAQSL-VRAP 83 (152) T ss_dssp EECHHHHHHHHHSHHHHHTEEEEECCS-TTGGGCBCTTCEECCTTTCCHHHHHHHHHHHHHTTCCEEEEECSSSS-SHHH T ss_pred EECHHHHHHHHHCCCCCCCEEEEECCC-HHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC-CHHH T ss_conf 479999999984867668879998886-79863814788866708889885678776666428961899978898-6389 Q ss_pred HHHHHHHH------CCCC-EEEECCCHHHHHHCCCCCC Q ss_conf 89999997------1898-0665279599987389413 Q T0592 89 KAAAKFAQ------LGFR-VKELIGGIEYWRKENGEVE 119 (144) Q Consensus 89 ~aa~~L~~------~G~~-v~~l~GG~~aW~~~G~pve 119 (144) .+|..|.. .||+ |++|+|||.+|++.+..++ T Consensus 84 ~aA~~l~~~~~~~~~g~~~V~vL~GG~~~W~~~y~d~~ 121 (152) T 2j6p_A 84 KGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVR 121 (152) T ss_dssp HHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTC T ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCC T ss_conf 99999999999846999848998895899997686657 No 31 >3aay_A Putative thiosulfate sulfurtransferase; X-RAY crystallography, sulfurtranserase, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A Probab=99.76 E-value=1e-18 Score=130.59 Aligned_cols=106 Identities=20% Similarity=0.224 Sum_probs=84.3 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCC-CCCCCCCCCCCCCCCCHHHH---------------HHH-HHHCCCCCCCEEEEE Q ss_conf 0179999999961898889986452-22322323454333372565---------------565-420003575358885 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRD-AEAYKECHIPTAISIPGNKI---------------NED-TTKRLSKEKVIITYC 79 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~-~~ey~~ghIpGAi~ip~~~l---------------~~~-~~~~l~~d~~iVvyC 79 (144) -+++..|++.|. +++++|||+|+ ..+|.++|||||+++++... ... ....+.++++||+|+ T Consensus 7 lVs~~wL~~~l~--~~~vvilD~r~~~~~Y~~gHIPGAi~~d~~~~~~~~~~~~lp~~~~~~~~l~~lGI~~~~~VVvYd 84 (277) T 3aay_A 7 LVSADWAESNLH--APKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYG 84 (277) T ss_dssp EECHHHHHTTTT--CTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEEC T ss_pred EEEHHHHHHHCC--CCCEEEEECCCCHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEC T ss_conf 475999998638--989799989999788961839891787822213689876776799999999872978899899985 Q ss_pred CCCCCCHHHHHHHHHHHCCCC-EEEECCCHHHHHHCCCCCCCCCCCC Q ss_conf 288730567899999971898-0665279599987389413777766 Q T0592 80 WGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEGTLGAK 125 (144) Q Consensus 80 ~~~~~~~s~~aa~~L~~~G~~-v~~l~GG~~aW~~~G~pve~~~~~~ 125 (144) .+ ++..+++++|.|+..|++ |++|+||+.+|+++|+|++++.... T Consensus 85 ~~-~~~~a~R~~w~l~~~G~~~v~vLdGG~~~W~~~g~~~~~~~~~~ 130 (277) T 3aay_A 85 GN-NNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSR 130 (277) T ss_dssp SG-GGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCCCC T ss_pred CC-CCCHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCCCCCCCCC T ss_conf 77-67336778999998299642897895510010356545677522 No 32 >1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 Probab=99.75 E-value=1.4e-18 Score=129.75 Aligned_cols=109 Identities=23% Similarity=0.298 Sum_probs=85.7 Q ss_pred CCCCHHHHHHHHHCCCCCEEEEECCC----------CCCCCCCCCCCCCCCCHHHHHHHH------------------HH Q ss_conf 00179999999961898889986452----------223223234543333725655654------------------20 Q T0592 16 YETDIADLSIDIKKGYEGIIVVDVRD----------AEAYKECHIPTAISIPGNKINEDT------------------TK 67 (144) Q Consensus 16 ~~i~~~el~~~l~~g~~~~vlIDvR~----------~~ey~~ghIpGAi~ip~~~l~~~~------------------~~ 67 (144) +=+++.-|.+.|. +++++|||+|. .++|.++|||||++++++.+.... .. T Consensus 4 ~lVs~~wL~~~l~--~~~v~IiD~r~~~~~~~~~~~~~~Y~~gHIPGAv~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 81 (280) T 1urh_A 4 WFVGADWLAEHID--DPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMREL 81 (280) T ss_dssp CEECHHHHHTTTT--CTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHT T ss_pred CCCCHHHHHHHHC--CCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHC T ss_conf 5274999998758--99808998306888777867899998585989867796784654455632489988999886650 Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC-EEEECCCHHHHHHCCCCCCCCCCCCCC Q ss_conf 003575358885288730567899999971898-066527959998738941377776643 Q T0592 68 RLSKEKVIITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEGTLGAKAD 127 (144) Q Consensus 68 ~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~-v~~l~GG~~aW~~~G~pve~~~~~~~~ 127 (144) .+.++.+||+|.++. ...+.+++|.|..+|++ |++|+||+.+|+++|+|++++...... T Consensus 82 Gi~~~~~vVvy~~~~-~~~a~R~~w~L~~~G~~~v~vLdGG~~~W~~~g~~~~~~~~~~~~ 141 (280) T 1urh_A 82 GVNQDKHLIVYDEGN-LFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPE 141 (280) T ss_dssp TCCTTSEEEEECSSS-CSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCCCCCC T ss_pred CCCCCCEEEEECCCC-CCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCC T ss_conf 688887799963787-622376766543048862798888616665320013578763234 No 33 >1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Probab=99.74 E-value=3.2e-18 Score=127.68 Aligned_cols=99 Identities=20% Similarity=0.288 Sum_probs=80.4 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCC--------CCCCCCCCCCHHHHHH-------------HHH-HCCCCCCC Q ss_conf 0179999999961898889986452223223--------2345433337256556-------------542-00035753 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKE--------CHIPTAISIPGNKINE-------------DTT-KRLSKEKV 74 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~--------ghIpGAi~ip~~~l~~-------------~~~-~~l~~d~~ 74 (144) .++..++.+.+.. ++++|||+|++.||.. ||||||+|+|+.++.. ... ..++++++ T Consensus 148 ~~~~~~v~~~~~~--~~~~iiD~R~~~ey~g~~~~~~~~GhIpgA~~ip~~~~~~~~~~~~~~~el~~~~~~~gi~~d~~ 225 (271) T 1e0c_A 148 TASRDYLLGRLGA--ADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKE 225 (271) T ss_dssp BCCHHHHHHHTTC--TTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTSE T ss_pred CCCHHHHHHHHCC--CCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC T ss_conf 2279999997179--98079946776873245653101675578321327783175444388999999999719999993 Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCC-EEEECCCHHHHHH-CCCCCC Q ss_conf 58885288730567899999971898-0665279599987-389413 Q T0592 75 IITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRK-ENGEVE 119 (144) Q Consensus 75 iVvyC~~~~~~~s~~aa~~L~~~G~~-v~~l~GG~~aW~~-~G~pve 119 (144) ||+||.+| .+|..++..|+.+||+ |++++||+..|.+ .++||| T Consensus 226 vvvyC~sG--~rAs~~~~~L~~lG~~~v~~YdGs~~eW~~~~~~Pve 270 (271) T 1e0c_A 226 IVTHCQTH--HRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270 (271) T ss_dssp EEEECSSS--SHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB T ss_pred EEEECCCC--HHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCC T ss_conf 89986986--9999999999983998827707889999459999980 No 34 >1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1 Probab=99.71 E-value=8.5e-18 Score=125.13 Aligned_cols=104 Identities=13% Similarity=0.137 Sum_probs=79.1 Q ss_pred CCCCHHHHHHHHHCC----CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH------CCCCCCCEEEEECCCCCC Q ss_conf 001799999999618----9888998645222322323454333372565565420------003575358885288730 Q T0592 16 YETDIADLSIDIKKG----YEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTK------RLSKEKVIITYCWGPACN 85 (144) Q Consensus 16 ~~i~~~el~~~l~~g----~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~------~l~~d~~iVvyC~~~~~~ 85 (144) -.|+|.++..+|++. .++++|||||++.||..|||+||+|+|..++...... ...+++.||+||...+ . T Consensus 23 k~Is~~~l~~ll~~~~~~~~~~~~iiDvR~~~ey~~gHI~gAinip~~~~~~~~~~~~~~~~~~~k~~~vv~yC~~s~-~ 101 (161) T 1c25_A 23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFSS-E 101 (161) T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHTTTSCCCCCTTSEEEEEEECSSSS-S T ss_pred CEECHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHCCEECCCEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC-C T ss_conf 777999999999561325669979998388888318705573766807888887765155576528983999980698-6 Q ss_pred HHHHHHHHHHH----------CCC-CEEEECCCHHHHHHCCCCCCC Q ss_conf 56789999997----------189-806652795999873894137 Q T0592 86 GATKAAAKFAQ----------LGF-RVKELIGGIEYWRKENGEVEG 120 (144) Q Consensus 86 ~s~~aa~~L~~----------~G~-~v~~l~GG~~aW~~~G~pve~ 120 (144) +|..++..|.. .|| +|++|+|||.+|....-++-. T Consensus 102 rs~~~a~~l~~~~~~~~~~~~~g~~~V~vL~GG~~~w~~~~p~lc~ 147 (161) T 1c25_A 102 RGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCE 147 (161) T ss_dssp HHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEE T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCC T ss_conf 0799999999878764110026998599978708999987816446 No 35 >1uar_A Rhodanese; sulfurtransferase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 Probab=99.68 E-value=7.5e-17 Score=119.50 Aligned_cols=91 Identities=25% Similarity=0.358 Sum_probs=74.2 Q ss_pred CCCEEEEECCCCCCCC----------------CCCCCCCCCCCHHHHHHH--------------HHHCCCCCCCEEEEEC Q ss_conf 9888998645222322----------------323454333372565565--------------4200035753588852 Q T0592 31 YEGIIVVDVRDAEAYK----------------ECHIPTAISIPGNKINED--------------TTKRLSKEKVIITYCW 80 (144) Q Consensus 31 ~~~~vlIDvR~~~ey~----------------~ghIpGAi~ip~~~l~~~--------------~~~~l~~d~~iVvyC~ 80 (144) +..++|||+|+++||. .||||||+|+|+.++... ....++++++||+||. T Consensus 162 ~~~~~i~D~Rs~~e~~G~~~~~~~~~~~~~~r~GhIPGA~nip~~~~~~~d~~~~~~~el~~~~~~~gi~~~k~ii~yC~ 241 (285) T 1uar_A 162 EGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCR 241 (285) T ss_dssp TTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHGGGTCCTTSEEEEECS T ss_pred CCCCEEEECCCHHHHHCCCCCCCCCCCCCCEECCEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECC T ss_conf 78731774245565422466678533556314654557441508660577645330478888999808999999999869 Q ss_pred CCCCCHHHHHHHHHHH-CCC-CEEEECCCHHHHHH-CCCCCCCCCC Q ss_conf 8873056789999997-189-80665279599987-3894137777 Q T0592 81 GPACNGATKAAAKFAQ-LGF-RVKELIGGIEYWRK-ENGEVEGTLG 123 (144) Q Consensus 81 ~~~~~~s~~aa~~L~~-~G~-~v~~l~GG~~aW~~-~G~pve~~~~ 123 (144) +| .+|+.++..|+. +|| +|++++||+..|.. .++||++|+. T Consensus 242 sG--~rAs~~~~~l~~~~G~~~v~lYdGSw~EW~~~~~lPv~~G~~ 285 (285) T 1uar_A 242 IA--ERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGEE 285 (285) T ss_dssp SH--HHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSCC T ss_pred CH--HHHHHHHHHHHHHCCCCCCCEECCCHHHHCCCCCCCCCCCCC T ss_conf 85--999999999999849998144586599972799998754979 No 36 >2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A Probab=99.68 E-value=4.1e-17 Score=121.09 Aligned_cols=99 Identities=16% Similarity=0.172 Sum_probs=78.2 Q ss_pred CCCHHHHHHHHHCC----CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH-------HCCCCCCCEEEEECCCCCC Q ss_conf 01799999999618----988899864522232232345433337256556542-------0003575358885288730 Q T0592 17 ETDIADLSIDIKKG----YEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTT-------KRLSKEKVIITYCWGPACN 85 (144) Q Consensus 17 ~i~~~el~~~l~~g----~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~-------~~l~~d~~iVvyC~~~~~~ 85 (144) .|+|.++.++|+.. .++++|||||++.||..|||+||+|+|...+..... ....++..||+||..++ . T Consensus 25 ~Is~~~L~~ll~~~~~~~~~~~lIIDvR~~~Ey~~gHI~gAiNip~~~~~~~~~~~~~~~~~~~~~~~~iv~yc~~s~-~ 103 (175) T 2a2k_A 25 YISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKSPIAPCSLDKRVILIFHSEFSS-E 103 (175) T ss_dssp EECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHSSCCCC----CEEEEEEECSSSS-S T ss_pred EECHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCHHCCCCCEECCCHHHHHHHHHHCHHHHHHHCCCCEEEEEECCCC-C T ss_conf 608999999997341135687799990785651001337777678067788765314344554137860899956898-0 Q ss_pred HHHHHHHHHHHC----------CC-CEEEECCCHHHHHHCCC Q ss_conf 567899999971----------89-80665279599987389 Q T0592 86 GATKAAAKFAQL----------GF-RVKELIGGIEYWRKENG 116 (144) Q Consensus 86 ~s~~aa~~L~~~----------G~-~v~~l~GG~~aW~~~G~ 116 (144) ++..++..|... || +|++|+||+.+|....- T Consensus 104 r~~~~a~~l~~~~~~~n~~~~~g~~~VyvL~GGy~~f~~~yp 145 (175) T 2a2k_A 104 RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHP 145 (175) T ss_dssp HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCG T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCH T ss_conf 289999999987776402324689879996683999998681 No 37 >2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} Probab=99.67 E-value=7.2e-17 Score=119.62 Aligned_cols=104 Identities=17% Similarity=0.209 Sum_probs=76.8 Q ss_pred CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH------------------HCCCCCCCEE Q ss_conf 7001799999999618988899864522232232345433337256556542------------------0003575358 Q T0592 15 SYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTT------------------KRLSKEKVII 76 (144) Q Consensus 15 ~~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~------------------~~l~~d~~iV 76 (144) .-+|++.+|.++|+.+.+.++|||||++.||.++||+||+|+|...+..... ......+.|| T Consensus 3 ~~~Is~e~L~~ll~~~~~~~lIIDvR~~~ey~~gHI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iV 82 (153) T 2vsw_A 3 GTQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVV 82 (153) T ss_dssp CEEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEE T ss_pred CCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEE T ss_conf 98237999999996699988999799989998626676642067899975402366663766667888753245564389 Q ss_pred EEECCCCCCHH------HHHHHHHHHCCC-CEEEECCCHHHHHHCCCCC Q ss_conf 88528873056------789999997189-8066527959998738941 Q T0592 77 TYCWGPACNGA------TKAAAKFAQLGF-RVKELIGGIEYWRKENGEV 118 (144) Q Consensus 77 vyC~~~~~~~s------~~aa~~L~~~G~-~v~~l~GG~~aW~~~G~pv 118 (144) +||....+..+ ..+...+...|+ +|++|+|||.+|.++.-.+ T Consensus 83 vyd~~~~~~~~~~~~~~~~~~~~~l~~~~~~V~iL~GG~~~f~~~yp~l 131 (153) T 2vsw_A 83 VYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGL 131 (153) T ss_dssp EECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGG T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCHHH T ss_conf 9837888621668999999999998658981899868279999878785 No 38 >2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A Probab=99.66 E-value=5.3e-17 Score=120.41 Aligned_cols=82 Identities=23% Similarity=0.374 Sum_probs=67.3 Q ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC-CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHH Q ss_conf 99864522232232345433337256556542000-35753588852887305678999999718980665279599987 Q T0592 35 IVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRL-SKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWRK 113 (144) Q Consensus 35 vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l-~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~~ 113 (144) .+||||+++||..+|||||+|+|++++........ +++++||+||.++ .+|..++..|..+||+...+.||+++| T Consensus 3 ~fiDvR~~~e~~~ghI~gai~ip~~~~~~~~~~~~~~k~~~ivi~C~sg--~rs~~a~~~L~~~Gy~~v~~~gG~~~~-- 78 (85) T 2jtq_A 3 HWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAVPDKNDTVKVYCNAG--RQSGQAKEILSEMGYTHVENAGGLKDI-- 78 (85) T ss_dssp EEEECSCHHHHTTEEETTCEECCHHHHHHHHHHHCCCTTSEEEEEESSS--HHHHHHHHHHHHTTCSSEEEEEETTTC-- T ss_pred EEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCCEEEECHHHHHC-- T ss_conf 4898968799973978886448556776767764467887799988999--699999999998599979976629873-- Q ss_pred CCCCCCCC Q ss_conf 38941377 Q T0592 114 ENGEVEGT 121 (144) Q Consensus 114 ~G~pve~~ 121 (144) ++|+.+| T Consensus 79 -~~p~~kG 85 (85) T 2jtq_A 79 -AMPKVKG 85 (85) T ss_dssp -CSCEEEC T ss_pred -CCCCCCC T ss_conf -2873669 No 39 >3ipo_A Putative thiosulfate sulfurtransferase YNJE; triple-domain rhodanese; HET: PE4; 2.40A {Escherichia coli k-12} PDB: 3ipp_A Probab=99.65 E-value=4.8e-17 Score=120.68 Aligned_cols=85 Identities=11% Similarity=0.117 Sum_probs=67.8 Q ss_pred CEEEEECCCCCCCC---------CCCCCCCCCCCHHHHHHH-------HH--HCCCCCCCEEEEECCCCCCHHHHHHHHH Q ss_conf 88998645222322---------323454333372565565-------42--0003575358885288730567899999 Q T0592 33 GIIVVDVRDAEAYK---------ECHIPTAISIPGNKINED-------TT--KRLSKEKVIITYCWGPACNGATKAAAKF 94 (144) Q Consensus 33 ~~vlIDvR~~~ey~---------~ghIpGAi~ip~~~l~~~-------~~--~~l~~d~~iVvyC~~~~~~~s~~aa~~L 94 (144) +.+|||+|++.+|. .||||||+|+|.+.+... .. ..+++|++||+||.++ .+..++..| T Consensus 20 ~~~iiD~R~~~~y~g~~~~~~~~~GHIpgAinip~~~l~~~~~~~l~~~~~~~~~~~d~~ivlyc~~~---~~~~~a~~L 96 (416) T 3ipo_A 20 NGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASWLDKMSTEQLNAWIKQHNLKTDAPVALYGNDK---DVDAVKTRL 96 (416) T ss_dssp TCEEEECSCHHHHTTCCSSTTCCCSEETTCEECCGGGGGGCCHHHHHHHHHHTTCCTTSCEEEESSHH---HHHHHHHHH T ss_pred CCEEEECCCHHHCCCCCCCCCCCCCCCCCCEECCHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCC---CHHHHHHHH T ss_conf 96899798967827765667775743888661781564335889999998862899898189996873---479999999 Q ss_pred HHCCCC-EEEECCCHHHHHHCCCCCCC Q ss_conf 971898-06652795999873894137 Q T0592 95 AQLGFR-VKELIGGIEYWRKENGEVEG 120 (144) Q Consensus 95 ~~~G~~-v~~l~GG~~aW~~~G~pve~ 120 (144) .++||+ |++|.||+.+|...+..... T Consensus 97 ~~~G~~~V~~~~gg~~~W~~~~~~~~~ 123 (416) T 3ipo_A 97 QKAGLTHISILSDALSEPSRLQKLPHF 123 (416) T ss_dssp HHTTCCCEEEBTTTTSCGGGEECCTTG T ss_pred HHHCCCEEEEECCCCHHHHHCCCCCCC T ss_conf 982897279931651332320355664 No 40 >1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4 Probab=99.65 E-value=1.4e-16 Score=117.82 Aligned_cols=102 Identities=17% Similarity=0.202 Sum_probs=71.4 Q ss_pred CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH----------------HHHCCCCCCCEEEEE Q ss_conf 0017999999996189888998645222322323454333372565565----------------420003575358885 Q T0592 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINED----------------TTKRLSKEKVIITYC 79 (144) Q Consensus 16 ~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~----------------~~~~l~~d~~iVvyC 79 (144) .+|++.+|.++|++...+++|||||++.+|..+|||||+|+|...+... ..........||+|| T Consensus 15 ~~It~~eL~~~l~~~~~~~liiDvR~~~ey~~~HI~gAinip~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~IVvyd 94 (157) T 1whb_A 15 GAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVLLD 94 (157) T ss_dssp SEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHGGGTSSEEEEEC T ss_pred CEECHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCEEECHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE T ss_conf 84969999999845798889997778777845617887870878925465667776664488999874215686179983 Q ss_pred CCCCCCH--HHH-HHHHHHH--------CCC-CEEEECCCHHHHHHCCCCC Q ss_conf 2887305--678-9999997--------189-8066527959998738941 Q T0592 80 WGPACNG--ATK-AAAKFAQ--------LGF-RVKELIGGIEYWRKENGEV 118 (144) Q Consensus 80 ~~~~~~~--s~~-aa~~L~~--------~G~-~v~~l~GG~~aW~~~G~pv 118 (144) ....... ... +.+.+.. .|+ +|++|+|||.+|+.. ||. T Consensus 95 ~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~iL~GG~~~W~~~-yp~ 144 (157) T 1whb_A 95 WFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 144 (157) T ss_dssp SSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGG T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHH-CHH T ss_conf 79875368899999999999862345545788669980749999987-835 No 41 >1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A Probab=99.65 E-value=2.4e-16 Score=116.46 Aligned_cols=106 Identities=20% Similarity=0.188 Sum_probs=82.4 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCC------------CCCCCCCCCCCHHHHHHH--------------HHHCCC Q ss_conf 017999999996189888998645222322------------323454333372565565--------------420003 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYK------------ECHIPTAISIPGNKINED--------------TTKRLS 70 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~------------~ghIpGAi~ip~~~l~~~--------------~~~~l~ 70 (144) ..+..++.+.+..+ +++|||+|++++|. .||||||+|+|+.++... ....++ T Consensus 161 ~~~~~~~~~~~~~~--~~~lvD~R~~~~~~g~~~~~~~~~~r~GhIPgA~nip~~~~~~~~~~~k~~~el~~~~~~~gi~ 238 (296) T 1rhs_A 161 LKTYEQVLENLESK--RFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVD 238 (296) T ss_dssp EECHHHHHHHHHHC--CSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTCC T ss_pred CCHHHHHHHHHHCC--CCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCC T ss_conf 20099999987377--7525521370443101345665566663467975778677430001479999999999974999 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCC-CEEEECCCHHHHHHCC---CCCCCCCCCCC Q ss_conf 57535888528873056789999997189-8066527959998738---94137777664 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKEN---GEVEGTLGAKA 126 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~-~v~~l~GG~~aW~~~G---~pve~~~~~~~ 126 (144) ++++||+||.+| .+|+..+..|..+|| +|++++|++..|...+ +||++|++.++ T Consensus 239 ~~k~vi~yC~sG--~rAs~~~~~l~~lG~~~v~lYdGSw~EW~~~~~p~~Pv~~G~~~~~ 296 (296) T 1rhs_A 239 LTKPLIATCRKG--VTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGKGGKA 296 (296) T ss_dssp TTSCEEEECSSS--STHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBTTBC--- T ss_pred CCCCEEEECCCH--HHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCEECCCCCCC T ss_conf 999999989709--9999999999986999804608819997002699887105899998 No 42 >3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, structural genomics; 2.10A {Mycobacterium tuberculosis} Probab=99.65 E-value=1.7e-16 Score=117.39 Aligned_cols=92 Identities=23% Similarity=0.336 Sum_probs=73.2 Q ss_pred CCEEEEECCCCCCCC----------------CCCCCCCCCCCHHHHH------------HHHHHCCCCCCCEEEEECCCC Q ss_conf 888998645222322----------------3234543333725655------------654200035753588852887 Q T0592 32 EGIIVVDVRDAEAYK----------------ECHIPTAISIPGNKIN------------EDTTKRLSKEKVIITYCWGPA 83 (144) Q Consensus 32 ~~~vlIDvR~~~ey~----------------~ghIpGAi~ip~~~l~------------~~~~~~l~~d~~iVvyC~~~~ 83 (144) ++..|||+|++++|. .||||||+|+|+.++. ....+.++++++||+||.+| T Consensus 191 ~~~~lvDaR~~~ef~G~~~~~~~~~~~g~~r~GhIPgAinip~~~~~~~~g~~k~~~eL~~~~~~l~~d~~vi~yC~sG- 269 (318) T 3hzu_A 191 GAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDDQTVVYCRIG- 269 (318) T ss_dssp TTSCEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHTTTCCTTCCCEEECSSS- T ss_pred CCCEEEECCCHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCC- T ss_conf 7751562476765067555567667646440567278313668885796401088999999985579999989995985- Q ss_pred CCHHHHHHHHHHH-CCC-CEEEECCCHHHHHH-CCCCCCCCCCCC Q ss_conf 3056789999997-189-80665279599987-389413777766 Q T0592 84 CNGATKAAAKFAQ-LGF-RVKELIGGIEYWRK-ENGEVEGTLGAK 125 (144) Q Consensus 84 ~~~s~~aa~~L~~-~G~-~v~~l~GG~~aW~~-~G~pve~~~~~~ 125 (144) .+|+.++..|.+ +|| +|++++|++..|.. .++||++|+..- T Consensus 270 -~~As~~~~~L~~~lG~~~v~lYdGSw~EW~~~~~lPv~tG~~p~ 313 (318) T 3hzu_A 270 -ERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPG 313 (318) T ss_dssp -HHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSSSCC T ss_pred -HHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCCCCEEECCCCC T ss_conf -99999999999984999811538819997269999823799888 No 43 >1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A Probab=99.63 E-value=5.6e-16 Score=114.33 Aligned_cols=101 Identities=18% Similarity=0.226 Sum_probs=78.0 Q ss_pred CCCHHHHHHHHHCC----CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH-------HCCCCCCCEEEEECCCCCC Q ss_conf 01799999999618----988899864522232232345433337256556542-------0003575358885288730 Q T0592 17 ETDIADLSIDIKKG----YEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTT-------KRLSKEKVIITYCWGPACN 85 (144) Q Consensus 17 ~i~~~el~~~l~~g----~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~-------~~l~~d~~iVvyC~~~~~~ 85 (144) .|+|.++.++|+.. .++++|||||++.||..|||+||+|+|..++..... ...+++..+|+||...+ . T Consensus 45 ~I~~~~l~~~l~~~~~~~~~~~lIID~R~~~Ey~~GHI~GAiNip~~~~~~~~~~~~~~~~~~~~k~~~iI~yCe~s~-~ 123 (211) T 1qb0_A 45 YISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKSPIAPCSLDKRVILIFHCEFSS-E 123 (211) T ss_dssp EECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHTTTCCCSSTTSEEEEEEECSSSS-S T ss_pred CCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHCCCEECCEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC-C T ss_conf 438999999984623245588799987887875088666604178078888875542444543157853899954688-3 Q ss_pred HHHHHHHHHHH----------CCCC-EEEECCCHHHHHHCCCCC Q ss_conf 56789999997----------1898-066527959998738941 Q T0592 86 GATKAAAKFAQ----------LGFR-VKELIGGIEYWRKENGEV 118 (144) Q Consensus 86 ~s~~aa~~L~~----------~G~~-v~~l~GG~~aW~~~G~pv 118 (144) ++..++..|+. .||+ |++|+||+.+|...--.+ T Consensus 124 r~~~~a~~Lr~~d~~~n~~~~l~~~eVyiL~GGy~~F~~~yp~l 167 (211) T 1qb0_A 124 RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 167 (211) T ss_dssp HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCCCC T ss_conf 27999999999888761012579986999775599999878042 No 44 >3aay_A Putative thiosulfate sulfurtransferase; X-RAY crystallography, sulfurtranserase, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A Probab=99.59 E-value=1.3e-15 Score=112.11 Aligned_cols=88 Identities=23% Similarity=0.360 Sum_probs=69.8 Q ss_pred CEEEEECCCCCCC----------------CCCCCCCCCCCCHHHHHHH--------------HHHCCCCCCCEEEEECCC Q ss_conf 8899864522232----------------2323454333372565565--------------420003575358885288 Q T0592 33 GIIVVDVRDAEAY----------------KECHIPTAISIPGNKINED--------------TTKRLSKEKVIITYCWGP 82 (144) Q Consensus 33 ~~vlIDvR~~~ey----------------~~ghIpGAi~ip~~~l~~~--------------~~~~l~~d~~iVvyC~~~ 82 (144) ...|||+|+.++| ..||||||+|+|+.++... ....++++++||+||.+| T Consensus 157 ~~~ivDaR~~~~~~G~~~~p~~~~~~~~~r~GhIPGA~nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~k~vi~yC~sG 236 (277) T 3aay_A 157 VKNLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIG 236 (277) T ss_dssp TSEEEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTCCTTSCEEEECSSH T ss_pred CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCH T ss_conf 44312466500005502576666554676587657876774665058763434289999999981899899989986981 Q ss_pred CCCHHHHHHHHHHH-CCCC-EEEECCCHHHHHH-CCCCCCCCC Q ss_conf 73056789999997-1898-0665279599987-389413777 Q T0592 83 ACNGATKAAAKFAQ-LGFR-VKELIGGIEYWRK-ENGEVEGTL 122 (144) Q Consensus 83 ~~~~s~~aa~~L~~-~G~~-v~~l~GG~~aW~~-~G~pve~~~ 122 (144) .+|+..+..|.. +||+ |++++|++..|.. .++|||+|. T Consensus 237 --~~As~~~~~l~~~lG~~~v~lYdGSw~EW~~~~~~Pve~G~ 277 (277) T 3aay_A 237 --ERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS 277 (277) T ss_dssp --HHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCCC T ss_pred --HHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCCCCCCCCC T ss_conf --99999999999973999810648729997179999857697 No 45 >2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4 Probab=99.59 E-value=9.8e-16 Score=112.87 Aligned_cols=104 Identities=17% Similarity=0.216 Sum_probs=73.6 Q ss_pred HCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH----------------HHHCCCCCCCEE Q ss_conf 5570017999999996189888998645222322323454333372565565----------------420003575358 Q T0592 13 KLSYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINED----------------TTKRLSKEKVII 76 (144) Q Consensus 13 ~~~~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~----------------~~~~l~~d~~iV 76 (144) +-...|++.+|+++|+....+++|||||++.+|..+|||||+|+|...+... ........+.|| T Consensus 17 ~~~~~Is~~eL~~ll~~~~~~~liIDvR~~~eY~~~HI~gAIniP~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~iV 96 (157) T 2gwf_A 17 RGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVV 96 (157) T ss_dssp --CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEEE T ss_pred CCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCEEECHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCEEE T ss_conf 99981999999999857999989998188899818846998984878812445323454307789999986336898399 Q ss_pred EEECCCCCCHHHHHH-------HHHH-----HCCC-CEEEECCCHHHHHHCCCCC Q ss_conf 885288730567899-------9999-----7189-8066527959998738941 Q T0592 77 TYCWGPACNGATKAA-------AKFA-----QLGF-RVKELIGGIEYWRKENGEV 118 (144) Q Consensus 77 vyC~~~~~~~s~~aa-------~~L~-----~~G~-~v~~l~GG~~aW~~~G~pv 118 (144) +||..+.. .+..++ ..|. ..|+ +|++|+|||.+|... ||- T Consensus 97 vy~~~~~~-~~~~~~~~l~~~~~~l~~~~~~~~~~~~v~iL~GG~~~W~~~-yp~ 149 (157) T 2gwf_A 97 LLDWFSSA-KDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 149 (157) T ss_dssp EECSSCCG-GGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGG T ss_pred EEECCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHH-CHH T ss_conf 99899986-557799999999999850144547898889996859999876-842 No 46 >1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 Probab=99.59 E-value=1.2e-15 Score=112.24 Aligned_cols=101 Identities=23% Similarity=0.345 Sum_probs=79.1 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCC-----------CCCCCCCCCCCHHHHHHH-------------HHHCCCCC Q ss_conf 017999999996189888998645222322-----------323454333372565565-------------42000357 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYK-----------ECHIPTAISIPGNKINED-------------TTKRLSKE 72 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~-----------~ghIpGAi~ip~~~l~~~-------------~~~~l~~d 72 (144) .++..+....+.++ ..++||+|++++|. .||||||+|+|+.++... ....++++ T Consensus 153 ~~~~~~~~~~~~~~--~~~~id~r~~~e~~g~~~~~~~~~~~GhIPgA~~ip~~~~~~~~~~~~~~el~~~~~~~gi~~~ 230 (280) T 1urh_A 153 VVKVTDVLLASHEN--TAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYD 230 (280) T ss_dssp BCCHHHHHHHHHHT--CSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSS T ss_pred CCCHHHHHHHHHHC--CCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCC T ss_conf 11189999986401--1113303542432134667754552761576756746653022347898999999997289999 Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCC-CEEEECCCHHHHH-HCCCCCCCC Q ss_conf 535888528873056789999997189-8066527959998-738941377 Q T0592 73 KVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWR-KENGEVEGT 121 (144) Q Consensus 73 ~~iVvyC~~~~~~~s~~aa~~L~~~G~-~v~~l~GG~~aW~-~~G~pve~~ 121 (144) ++||+||.+| .+|+.++..|+.+|| +|++++||+..|. ..++|||.- T Consensus 231 k~vi~yC~sG--~rAs~~~~~l~~lG~~~v~lYdGSw~EW~~~~~lPve~~ 279 (280) T 1urh_A 231 KPIIVSCGSG--VTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPV 279 (280) T ss_dssp SCEEEECCSS--STHHHHHHHHHHTTCSSCEEECCSCCC------------ T ss_pred CCEEEECCCH--HHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCCC T ss_conf 9999989868--999999999998699982476882999833989999878 No 47 >2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Thermus thermophilus HB8} PDB: 2eg3_A Probab=99.53 E-value=5.9e-15 Score=108.20 Aligned_cols=88 Identities=22% Similarity=0.232 Sum_probs=66.3 Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH----------------HHHHHCCCCCCCEEEEECCCCCCHHHHHHHH Q ss_conf 898889986452223223234543333725655----------------6542000357535888528873056789999 Q T0592 30 GYEGIIVVDVRDAEAYKECHIPTAISIPGNKIN----------------EDTTKRLSKEKVIITYCWGPACNGATKAAAK 93 (144) Q Consensus 30 g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~----------------~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~ 93 (144) ..++++|||||++.+|..||||||+|+|++.+. ......+.-+++||+||.+. ..++.++++. T Consensus 3 ~~ed~vilDvR~~~~y~~gHIPGAv~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~VVvY~~~~-~~~a~r~~~~ 81 (230) T 2eg4_A 3 LPEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGL-TSRLCRTAFF 81 (230) T ss_dssp CCTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSS-CHHHHHHHHH T ss_pred CCCCEEEEECCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC-CHHHHHHHHH T ss_conf 889869998969899961878888656866523355677666876999999999718986189977984-0899999997 Q ss_pred HHHCCCCEEEECCCHHHHHHCCCCC Q ss_conf 9971898066527959998738941 Q T0592 94 FAQLGFRVKELIGGIEYWRKENGEV 118 (144) Q Consensus 94 L~~~G~~v~~l~GG~~aW~~~G~pv 118 (144) |...|++|+.|+||+.+|..++... T Consensus 82 l~~~g~~v~~L~GG~~~w~~~~~~~ 106 (230) T 2eg4_A 82 LGLGGLEVQLWTEGWEPYATEKEEP 106 (230) T ss_dssp HHHTTCCEEEECSSCGGGCCBCSCC T ss_pred HHCCCCCEEEECCCCCCCCCCCCCC T ss_conf 5547642244058744431146655 No 48 >1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 Probab=99.53 E-value=1.7e-15 Score=111.37 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=72.0 Q ss_pred HCCCCCEEEEECCCCCCCC-----------CCCCCCCCCCCHHHHHHH------------H----HH------CCCCCCC Q ss_conf 6189888998645222322-----------323454333372565565------------4----20------0035753 Q T0592 28 KKGYEGIIVVDVRDAEAYK-----------ECHIPTAISIPGNKINED------------T----TK------RLSKEKV 74 (144) Q Consensus 28 ~~g~~~~vlIDvR~~~ey~-----------~ghIpGAi~ip~~~l~~~------------~----~~------~l~~d~~ 74 (144) ....++++|||+|+++||. .||||||+|+|+.++... . .. ..+..++ T Consensus 169 ~~~~~~~~IvDaRs~~ef~G~~~~~~~~~r~GHIPGAiniP~~~~l~~~~~~~~~k~~~eL~~~~~~l~~~~g~~~~~k~ 248 (373) T 1okg_A 169 DEIPPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSS 248 (373) T ss_dssp GGSCTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTT T ss_pred HHCCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCE T ss_conf 63144406752765102526568765443268567762477599612278887429999999999999875589888985 Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCC-CEEEECCCHHHHHH-CCCCCCCCCCC Q ss_conf 5888528873056789999997189-80665279599987-38941377776 Q T0592 75 IITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRK-ENGEVEGTLGA 124 (144) Q Consensus 75 iVvyC~~~~~~~s~~aa~~L~~~G~-~v~~l~GG~~aW~~-~G~pve~~~~~ 124 (144) ||+||.+| .+|+.++..|..+|| +|++++|++..|.+ .++|||++--. T Consensus 249 iI~YCgsG--~rAs~~~~aL~~lG~~~v~lYDGSW~EWs~~~~lPVer~~~~ 298 (373) T 1okg_A 249 FVFSCGSG--VTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRSIID 298 (373) T ss_dssp SEEECSSS--STHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHHHHH T ss_pred EEEECCCH--HHHHHHHHHHHHCCCCCCEECCCCHHHHCCCCCCCCEEEECC T ss_conf 99999619--999999999998599982035886899747999994411147 No 49 >2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens} Probab=99.45 E-value=5.5e-14 Score=102.44 Aligned_cols=100 Identities=20% Similarity=0.215 Sum_probs=67.5 Q ss_pred CCCHHHHHHHHHCCC------CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH---------H-----------CCC Q ss_conf 017999999996189------88899864522232232345433337256556542---------0-----------003 Q T0592 17 ETDIADLSIDIKKGY------EGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTT---------K-----------RLS 70 (144) Q Consensus 17 ~i~~~el~~~l~~g~------~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~---------~-----------~l~ 70 (144) .|+|.+++..|.+.. ++++|||||++.||..||||||+|+|......... . ... T Consensus 2 ~i~p~~l~~~~~~~~~~~l~~~~~lIIDvR~~~ey~~gHI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142) T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRI 81 (142) T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHH T ss_pred EECHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC T ss_conf 67799999998888873568899189988999999728887877678277765432012334540566668998873447 Q ss_pred CCCCEEEEECCCCCCHH-------HHHHHHHHHCCCCEEEECCCHHHHHHCCCC Q ss_conf 57535888528873056-------789999997189806652795999873894 Q T0592 71 KEKVIITYCWGPACNGA-------TKAAAKFAQLGFRVKELIGGIEYWRKENGE 117 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s-------~~aa~~L~~~G~~v~~l~GG~~aW~~~G~p 117 (144) ....+|+||....+... ..+...+...|.+|++|+|||.+|.+. || T Consensus 82 ~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~V~iL~GGf~~~~~~-yP 134 (142) T 2ouc_A 82 FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGGLSSFKQN-HE 134 (142) T ss_dssp HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTCCCEEETTHHHHHTTT-CG T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHH-CH T ss_conf 663699971787776413566699999999873698199986479999987-86 No 50 >1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1 Probab=97.84 E-value=1.2e-05 Score=52.80 Aligned_cols=105 Identities=21% Similarity=0.292 Sum_probs=71.6 Q ss_pred HHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH--CCC----------------- Q ss_conf 9865570017999999996189888998645222322323454333372565565420--003----------------- Q T0592 10 YMKKLSYETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTK--RLS----------------- 70 (144) Q Consensus 10 f~~~~~~~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~--~l~----------------- 70 (144) |...|...-..+=+..-+.-|++.+++.|+|+.+-|+..||..|+|+...-+.-.+.. .+| T Consensus 10 fasemaisktvawlneqlelgnerlllmdcrpqelyesshiesainvaipgimlrrlqkgnlpvralftrgedrdrftrr 89 (154) T 1hzm_A 10 FASEMAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRR 89 (154) T ss_dssp SSSCCSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHS T ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCCCCCHHHHHHH T ss_conf 17888899999999998852753278640788897665446766642352999999870897426563156513278772 Q ss_pred -CCCCEEEEECCC--------CCCHHHHHHHHHHHCCCCEEEECCCHHHHHHC Q ss_conf -575358885288--------73056789999997189806652795999873 Q T0592 71 -KEKVIITYCWGP--------ACNGATKAAAKFAQLGFRVKELIGGIEYWRKE 114 (144) Q Consensus 71 -~d~~iVvyC~~~--------~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~~~ 114 (144) ...+||+|..+. +...-.....+|+..|-++.+|+|||...+++ T Consensus 90 cgtdtvvlydesssdwnentggesllglllkklkdegcrafyleggfskfqae 142 (154) T 1hzm_A 90 CGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCRAFYLEGGFSKFQAE 142 (154) T ss_dssp TTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCCCEECCCCHHHHHHH T ss_pred CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH T ss_conf 38865999527756423366618789999998633353257650652644301 No 51 >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* Probab=93.04 E-value=0.45 Score=25.59 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=41.9 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCC---------------CCCCCCCCCC-HHHHHHHHHHCC--CCCCCEEEE Q ss_conf 0179999999961898889986452223223---------------2345433337-256556542000--357535888 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKE---------------CHIPTAISIP-GNKINEDTTKRL--SKEKVIITY 78 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~---------------ghIpGAi~ip-~~~l~~~~~~~l--~~d~~iVvy 78 (144) ..++.++..+-+.|-+ .||+.|+..+-.. -|||=...-| ..++. .....+ .++++|+++ T Consensus 27 qp~~~~l~~L~~~Gik--tVInLr~~~e~~~~~~~~~~~~~~Gi~~~~iPv~~~~pt~e~v~-~~~~~~~~~~~~pVlvH 103 (157) T 3gxh_A 27 LPNEQQFSLLKQAGVD--VVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVE-AFFAAMDQHKGKDVLVH 103 (157) T ss_dssp CCCHHHHHHHHHTTCC--EEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHH-HHHHHHHHTTTSCEEEE T ss_pred CCCHHHHHHHHHCCCC--EEEECCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHH-HHHHHHHHCCCCCEEEE T ss_conf 9899999999987997--99988866410011469999999299711267432212299999-99999863368978988 Q ss_pred ECCCCCCHHHHHHHHHHHCCCC Q ss_conf 5288730567899999971898 Q T0592 79 CWGPACNGATKAAAKFAQLGFR 100 (144) Q Consensus 79 C~~~~~~~s~~aa~~L~~~G~~ 100 (144) |.+|. +.+..++..+...|.+ T Consensus 104 C~sG~-R~g~~~~~y~~~~g~~ 124 (157) T 3gxh_A 104 CLANY-RASAFAYLYQLKQGQN 124 (157) T ss_dssp CSBSH-HHHHHHHHHHHHTTCC T ss_pred CCCCC-HHHHHHHHHHHHHCCC T ss_conf 89986-5999999999980999 No 52 >2f46_A Hypothetical protein; 7380613, DUF442, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.41A {Neisseria meningitidis Z2491} Probab=88.98 E-value=1.1 Score=23.17 Aligned_cols=95 Identities=16% Similarity=0.137 Sum_probs=46.3 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCC-------------C-----CCC--CCCCCCHHHHHHHHHHCC-CCCCCE Q ss_conf 0179999999961898889986452223223-------------2-----345--433337256556542000-357535 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKE-------------C-----HIP--TAISIPGNKINEDTTKRL-SKEKVI 75 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~-------------g-----hIp--GAi~ip~~~l~~~~~~~l-~~d~~i 75 (144) .+++.++..+-+.|=+ .||+.|+..|... . ++| .....+.+.+. .....+ ..+.+| T Consensus 29 qp~~~~~~~L~~~Gik--tVInLr~~~E~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~-~~~~~l~~~~~pV 105 (156) T 2f46_A 29 QLTKADAEQIAQLGIK--TIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVE-TFRQLIGQAEYPV 105 (156) T ss_dssp CCCGGGHHHHHHHTCC--EEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTTCCHHHHH-HHHHHHHTSCSSE T ss_pred CCCHHHHHHHHHCCCC--EEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHH-HHHHHHHCCCCCE T ss_conf 9899999999986986--898638887687876999999999980864033025676642178999-9999984367838 Q ss_pred EEEECCCCCCHHHHHH-HHHHHCCCCEEEECCCHHHHHHCCCCCC Q ss_conf 8885288730567899-9999718980665279599987389413 Q T0592 76 ITYCWGPACNGATKAA-AKFAQLGFRVKELIGGIEYWRKENGEVE 119 (144) Q Consensus 76 VvyC~~~~~~~s~~aa-~~L~~~G~~v~~l~GG~~aW~~~G~pve 119 (144) .++|..|. |+...+ ......|.. ++-=+..-+.+|+.++ T Consensus 106 lvHC~~G~--Rs~~l~a~~~~~~g~~---~~~al~~~~~~G~~l~ 145 (156) T 2f46_A 106 LAYCRTGT--RCSLLWGFRRAAEGMP---VDEIIRRAQAAGVNLE 145 (156) T ss_dssp EEECSSSH--HHHHHHHHHHHHTTCC---HHHHHHHHHHTTCCCG T ss_pred EEECCCCC--CHHHHHHHHHHHCCCC---HHHHHHHHHHHCCCHH T ss_conf 98808998--3999999999981989---9999999999299978 No 53 >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* Probab=88.82 E-value=0.91 Score=23.73 Aligned_cols=78 Identities=15% Similarity=0.092 Sum_probs=43.7 Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC-----------CCCCCHH-----------HHHHHHHHCCCCCCCEEEE Q ss_conf 99999996189888998645222322323454-----------3333725-----------6556542000357535888 Q T0592 21 ADLSIDIKKGYEGIIVVDVRDAEAYKECHIPT-----------AISIPGN-----------KINEDTTKRLSKEKVIITY 78 (144) Q Consensus 21 ~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpG-----------Ai~ip~~-----------~l~~~~~~~l~~d~~iVvy 78 (144) .++..+.+.|-+ .||...+..|+..-.++. -.++|.. ++.......+..+++|+|. T Consensus 62 ~Dl~~Lk~~Gi~--~Vv~L~~~~E~~~~~v~~l~~~~~~~gi~~~~~pi~D~~~P~~~~~~~~~~~i~~~l~~g~~V~VH 139 (212) T 1fpz_A 62 KDTEELKSCGIQ--DIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIH 139 (212) T ss_dssp HHHHHHHHHTCC--EEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCCEEEE T ss_pred HHHHHHHHCCCC--EEEECCCHHHHHHCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE T ss_conf 999999977998--899889888998818751899999769879997406899986999999999999999769908988 Q ss_pred ECCCCCCHHHHHHHHHHHCCCC Q ss_conf 5288730567899999971898 Q T0592 79 CWGPACNGATKAAAKFAQLGFR 100 (144) Q Consensus 79 C~~~~~~~s~~aa~~L~~~G~~ 100 (144) |.+|-+..+..++..|...|+. T Consensus 140 C~~G~GRsg~v~a~~L~~~g~~ 161 (212) T 1fpz_A 140 SYGGLGRSCLVAACLLLYLSDT 161 (212) T ss_dssp CSSSSSHHHHHHHHHHHHHCSS T ss_pred CCCCCCCHHHHHHHHHHHHCCC T ss_conf 9999966899999999994789 No 54 >1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A* Probab=85.23 E-value=1.9 Score=21.89 Aligned_cols=32 Identities=16% Similarity=0.300 Sum_probs=24.9 Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC Q ss_conf 03575358885288730567899999971898 Q T0592 69 LSKEKVIITYCWGPACNGATKAAAKFAQLGFR 100 (144) Q Consensus 69 l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~ 100 (144) +..+.++++.|..|.....-.++..|..+|.+ T Consensus 170 ~~~~~pvL~HCtaGKDRTGv~aALlL~lLGV~ 201 (296) T 1ywf_A 170 LAAGRPVLTHCFAGKDRTGFVVALVLEAVGLD 201 (296) T ss_dssp HHTTCCEEEECSSSSSHHHHHHHHHHHHTTCC T ss_pred HCCCCCEEEECCCCCCCHHHHHHHHHHHCCCC T ss_conf 05798668745788750369999999982999 No 55 >2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; 2.60A {Homo sapiens} Probab=74.77 E-value=2.2 Score=21.41 Aligned_cols=39 Identities=8% Similarity=0.081 Sum_probs=30.1 Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHH Q ss_conf 75358885288730567899999971898066527959998 Q T0592 72 EKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWR 112 (144) Q Consensus 72 d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~ 112 (144) ..++|+||.+. ..+...+..|...|+++..+.||+.... T Consensus 54 ~~kviVF~~~~--~~~~~l~~~L~~~g~~~~~ihg~~~~~~ 92 (191) T 2p6n_A 54 PPPVLIFAEKK--ADVDAIHEYLLLKGVEAVAIHGGKDQEE 92 (191) T ss_dssp CSCEEEECSCH--HHHHHHHHHHHHHTCCEEEECTTSCHHH T ss_pred CCCEEEEECCH--HHHHHHHHHHHHCCCCEEEEECCCCHHH T ss_conf 89899998998--9999999999878997999969899999 No 56 >3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP- binding, helicase, nucleotide-binding; 2.80A {Thermus thermophilus HB27} Probab=73.82 E-value=2 Score=21.71 Aligned_cols=18 Identities=28% Similarity=0.475 Sum_probs=6.3 Q ss_pred HHHHHHCCCCEEEECCCH Q ss_conf 999997189806652795 Q T0592 91 AAKFAQLGFRVKELIGGI 108 (144) Q Consensus 91 a~~L~~~G~~v~~l~GG~ 108 (144) +..|...|+++..|.||+ T Consensus 45 ~~~L~~~g~~~~~~hg~~ 62 (300) T 3i32_A 45 AQGLLRLGHPAQALHGDM 62 (300) T ss_dssp HHHHHTTTCCEEEECSCC T ss_pred HHHHHHCCCCEEEEECCC T ss_conf 999986899789996999 No 57 >3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A Probab=73.52 E-value=4.1 Score=19.83 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=9.2 Q ss_pred HHHHHHHHHHCCCCEEEECCCH Q ss_conf 6789999997189806652795 Q T0592 87 ATKAAAKFAQLGFRVKELIGGI 108 (144) Q Consensus 87 s~~aa~~L~~~G~~v~~l~GG~ 108 (144) +...+..|...|+++..+.|++ T Consensus 44 ~~~l~~~L~~~g~~~~~ihg~~ 65 (212) T 3eaq_A 44 TEEIAQGLLRLGHPAQALHGDL 65 (212) T ss_dssp HHHHHHHHHHHTCCEEEECSSS T ss_pred HHHHHHHHHHCCCCEEEEECCC T ss_conf 9999999986899789997999 No 58 >1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19 Probab=72.64 E-value=3.4 Score=20.32 Aligned_cols=41 Identities=10% Similarity=0.197 Sum_probs=30.8 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHH Q ss_conf 5753588852887305678999999718980665279599987 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWRK 113 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~~ 113 (144) ....+++||.+. ......+..|...|+++..+.|++....+ T Consensus 29 ~~~k~iVF~~~~--~~~~~l~~~l~~~g~~~~~~hg~~~~~~R 69 (165) T 1fuk_A 29 SVTQAVIFCNTR--RKVEELTTKLRNDKFTVSAIYSDLPQQER 69 (165) T ss_dssp TCSCEEEEESSH--HHHHHHHHHHHHTTCCEEEECTTSCHHHH T ss_pred CCCCEEEEECCH--HHHHHHHHHHHHCCCCEEEEECCCCHHHH T ss_conf 998099998858--99999999998579978998579998999 No 59 >1xri_A AT1G05000; structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics, phosphoprotein phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A Probab=71.98 E-value=4.9 Score=19.37 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=42.9 Q ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCCCC------------CCCCCCCCC------CCHHHHHHHHHHCC--CCCCCEEE Q ss_conf 17999999996189888998645222322------------323454333------37256556542000--35753588 Q T0592 18 TDIADLSIDIKKGYEGIIVVDVRDAEAYK------------ECHIPTAIS------IPGNKINEDTTKRL--SKEKVIIT 77 (144) Q Consensus 18 i~~~el~~~l~~g~~~~vlIDvR~~~ey~------------~ghIpGAi~------ip~~~l~~~~~~~l--~~d~~iVv 77 (144) .++.++..+-..|-+ .+||.|++.+.. ..|||-.-. .+...+. .....+ .++.++++ T Consensus 21 ~~~~~~~~L~~lGIk--tIidlr~~~e~~~~~~~~~~~~i~~~~ip~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pvlv 97 (151) T 1xri_A 21 PDSANFSFLQTLGLR--SIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIR-MALKVLLDEKNHPVLI 97 (151) T ss_dssp CCHHHHHHHHHHTCS--EEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHH-HHHHHHHCGGGCSEEE T ss_pred CCHHHHHHHHHCCCC--EEEEECCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHH-HHHHHHHCCCCCCEEE T ss_conf 895529999986996--6997057643320021576549515346742343432001099999-9999997166998887 Q ss_pred EECCCCCCHHHHHHHHHHHCCCC Q ss_conf 85288730567899999971898 Q T0592 78 YCWGPACNGATKAAAKFAQLGFR 100 (144) Q Consensus 78 yC~~~~~~~s~~aa~~L~~~G~~ 100 (144) .|..|..+.+..++..+..+|.+ T Consensus 98 HC~aGkdRTg~v~a~~l~~~G~~ 120 (151) T 1xri_A 98 HCKRGKHRTGCLVGCLRKLQKWC 120 (151) T ss_dssp ECSSSSSHHHHHHHHHHHHTTBC T ss_pred ECCCCCHHHHHHHHHHHHHCCCC T ss_conf 76899507899999999994999 No 60 >2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, acetylation, ATP-binding, DNA-binding; 1.91A {Homo sapiens} Probab=68.40 E-value=5.3 Score=19.18 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=30.7 Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHH Q ss_conf 0035753588852887305678999999718980665279599 Q T0592 68 RLSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEY 110 (144) Q Consensus 68 ~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~a 110 (144) ...++..+++||.+. ..+...+..|...|+++..+.|++.. T Consensus 42 ~~~~~~~~iIF~~t~--~~~~~l~~~L~~~~~~~~~lh~~~~~ 82 (185) T 2jgn_A 42 ATGKDSLTLVFVETK--KGADSLEDFLYHEGYACTSIHGDRSQ 82 (185) T ss_dssp HC-CCSCEEEEESCH--HHHHHHHHHHHHTTCCEEEEC----- T ss_pred HCCCCCCEEEEECCH--HHHHHHHHHHHHCCCCEEEEECCCCH T ss_conf 329999699993977--99999999998779988887379998 No 61 >2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2hxy_A 2j0u_A 2j0u_B 2zu6_A Probab=68.11 E-value=6 Score=18.86 Aligned_cols=37 Identities=14% Similarity=0.264 Sum_probs=29.2 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHH Q ss_conf 575358885288730567899999971898066527959 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIE 109 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~ 109 (144) ....+++||.+. ..+...+..|...|+++..+.|++. T Consensus 275 ~~~k~iIF~~s~--~~~~~l~~~L~~~g~~~~~lh~~~~ 311 (410) T 2j0s_A 275 TITQAVIFCNTK--RKVDWLTEKMREANFTVSSMHGDMP 311 (410) T ss_dssp TSSEEEEECSSH--HHHHHHHHHHHHTTCCCEEECTTSC T ss_pred CCCCEEEEECCH--HHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 688279995568--9999999999878997899967897 No 62 >2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis} Probab=67.21 E-value=4.7 Score=19.49 Aligned_cols=41 Identities=15% Similarity=0.352 Sum_probs=29.5 Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHH Q ss_conf 03575358885288730567899999971898066527959998 Q T0592 69 LSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWR 112 (144) Q Consensus 69 l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~ 112 (144) .+.+ .+|+||.+- ..+...+..|...|+++..+.|++.... T Consensus 33 ~~~~-k~iVF~~s~--~~~~~l~~~l~~~g~~~~~~hg~~~~~~ 73 (163) T 2hjv_A 33 ENPD-SCIIFCRTK--EHVNQLTDELDDLGYPCDKIHGGMIQED 73 (163) T ss_dssp HCCS-SEEEECSSH--HHHHHHHHHHHHTTCCEEEECTTSCHHH T ss_pred CCCC-EEEEEECCH--HHHHHHHHHHCCCCCEEEEEECCCHHHH T ss_conf 8998-599996918--9999998432337900899968833999 No 63 >3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphoprotein, RNA-binding, ATP-binding; 3.50A {Homo sapiens} Probab=67.15 E-value=6.3 Score=18.75 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=29.2 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHH Q ss_conf 5753588852887305678999999718980665279599 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEY 110 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~a 110 (144) ..+.+++||.+. ..+...+..|...|+++..+.|++.. T Consensus 279 ~~~k~lIF~~~~--~~~~~l~~~L~~~g~~~~~~h~~~~~ 316 (414) T 3eiq_A 279 TITQAVIFINTR--RKVDWLTEKMHARDFTVSAMHGDMDQ 316 (414) T ss_dssp CCSSCEEECSCH--HHHHHHHHHHHTTTCCCEEC---CHH T ss_pred CCCCEEEEECCH--HHHHHHHHHHHHCCCCEEEEECCCCH T ss_conf 898389995768--99999999998689979999289956 No 64 >3gfp_A DEAD box protein 5; mRNA export, ATPase, RECA-fold, ATP-binding, cytoplasm, helicase, hydrolase, membrane, mRNA transport; 1.80A {Saccharomyces cerevisiae} PDB: 2kbf_A Probab=65.83 E-value=5.8 Score=18.97 Aligned_cols=42 Identities=17% Similarity=0.170 Sum_probs=28.7 Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHH Q ss_conf 035753588852887305678999999718980665279599987 Q T0592 69 LSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWRK 113 (144) Q Consensus 69 l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~~ 113 (144) .+.. .+++||.+. ..+...+..|...|+++..+.|++..-.+ T Consensus 35 ~~~~-k~lIF~~s~--~~~~~l~~~L~~~g~~~~~ihg~~~~~~r 76 (189) T 3gfp_A 35 MTIG-SSIIFVATK--KTANVLYGKLKSEGHEVSILHGDLQTQER 76 (189) T ss_dssp CCCS-CEEEEESCH--HHHHHHHHHHHHTTCCEEEECTTSCHHHH T ss_pred CCCC-CEEEEECCH--HHHHHHHHHHHHCCCCEEEEECCCCHHHH T ss_conf 8999-799993988--99999999998769977865467999999 No 65 >2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* Probab=63.31 E-value=5 Score=19.34 Aligned_cols=50 Identities=24% Similarity=0.196 Sum_probs=30.5 Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEC-----CCH-HHHHHCCCCCCCCC Q ss_conf 357535888528873056789999997189806652-----795-99987389413777 Q T0592 70 SKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELI-----GGI-EYWRKENGEVEGTL 122 (144) Q Consensus 70 ~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~-----GG~-~aW~~~G~pve~~~ 122 (144) .+.+.|||+-+ +...-.+|+.|.+.|++|.+|+ ||- ..+...|++++.|. T Consensus 105 ~~~~kViVIGA---GiaGL~aA~~La~~G~~V~VlEa~~r~GGr~~t~~~~g~~~d~Ga 160 (662) T 2z3y_A 105 KKTGKVIIIGS---GVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGA 160 (662) T ss_dssp SCCCEEEEECC---BHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEETTEEEESSC T ss_pred CCCCEEEEECC---CHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCEEEECCC T ss_conf 99994999898---889999999998689988999799988471768984998997786 No 66 >1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19 Probab=62.83 E-value=6.9 Score=18.50 Aligned_cols=37 Identities=8% Similarity=0.108 Sum_probs=22.0 Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHH Q ss_conf 358885288730567899999971898066527959998 Q T0592 74 VIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWR 112 (144) Q Consensus 74 ~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~ 112 (144) .+++||.+- ..+...+..|...|+++..+.|++.... T Consensus 33 k~iVF~~~~--~~~~~l~~~l~~~~~~~~~ihg~l~~~e 69 (172) T 1t5i_A 33 QVVIFVKSV--QRCIALAQLLVEQNFPAIAIHRGMPQEE 69 (172) T ss_dssp SEEEECSSH--HHHHHHHHHHHHTTCCEEEECTTSCHHH T ss_pred CEEEEEEEE--CHHHHHHHHHHHCCCCCCCCCCCCHHHH T ss_conf 489997003--0225556776520344210002220233 No 67 >2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Probab=62.41 E-value=5.2 Score=19.23 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=24.1 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECC Q ss_conf 575358885288730567899999971898066527 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIG 106 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~G 106 (144) +.+.|||+- ++...-.+|+.|...|++|.+|++ T Consensus 277 k~kkVvVIG---AGiAGLsAA~~L~~~G~~VtVLEA 309 (852) T 2xag_A 277 KTGKVIIIG---SGVSGLAAARQLQSFGMDVTLLEA 309 (852) T ss_dssp CCCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECS T ss_pred CCCCEEEEC---CCHHHHHHHHHHHHCCCCEEEEEC T ss_conf 999789989---788999999999868999899938 No 68 >2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A* Probab=59.70 E-value=8.7 Score=17.92 Aligned_cols=12 Identities=8% Similarity=0.443 Sum_probs=5.5 Q ss_pred CCCCCEEEEECC Q ss_conf 189888998645 Q T0592 29 KGYEGIIVVDVR 40 (144) Q Consensus 29 ~g~~~~vlIDvR 40 (144) +|-.+++|++-+ T Consensus 28 ~G~~~V~vlE~~ 39 (424) T 2b9w_A 28 AGFHDYTILERT 39 (424) T ss_dssp TTCCCEEEECSS T ss_pred CCCCCEEEEECC T ss_conf 699988999579 No 69 >2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural genomics consortium, SGC, alternative initiation ATP-binding; 2.80A {Homo sapiens} Probab=59.04 E-value=6.9 Score=18.49 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=28.5 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHH Q ss_conf 575358885288730567899999971898066527959998 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWR 112 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~ 112 (144) ....+++||.+. ..+...+..|...|+++..|.|++..-. T Consensus 33 ~~~k~iIF~~t~--~~~~~l~~~l~~~~~~~~~lhg~~~~~~ 72 (175) T 2rb4_A 33 TIGQAIIFCQTR--RNAKWLTVEMIQDGHQVSLLSGELTVEQ 72 (175) T ss_dssp CCSEEEEECSCH--HHHHHHHHHHHTTTCCEEEECSSCCHHH T ss_pred CCCCEEEEECCH--HHHHHHHHHHHHCCCCEEEECCCCCHHH T ss_conf 998299997808--8899999999758977899809999999 No 70 >2g0t_A Conserved hypothetical protein; TM0796, structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; 2.67A {Thermotoga maritima} SCOP: c.37.1.10 Probab=58.62 E-value=9 Score=17.81 Aligned_cols=41 Identities=12% Similarity=0.004 Sum_probs=27.6 Q ss_pred ECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHC---CCCCC Q ss_conf 528873056789999997189806652795999873---89413 Q T0592 79 CWGPACNGATKAAAKFAQLGFRVKELIGGIEYWRKE---NGEVE 119 (144) Q Consensus 79 C~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~~~---G~pve 119 (144) |+.|....+......|++.|+++..+.-|-.+|... |.|+. T Consensus 179 cavGK~tTal~l~~~l~~~Gi~a~fiaTGQTGilig~~~Gv~~D 222 (350) T 2g0t_A 179 CVVGKRTTAVQLWERALEKGIKAGFLATGQTGILIGADAGYVID 222 (350) T ss_dssp SSSSHHHHHHHHHHHHHHTTCCEEEEECSHHHHHTTCSEECCGG T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCEECC T ss_conf 34418999999999999679973699707705764046544526 No 71 >1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A Probab=56.92 E-value=9.7 Score=17.63 Aligned_cols=32 Identities=13% Similarity=0.087 Sum_probs=22.7 Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC Q ss_conf 03575358885288730567899999971898 Q T0592 69 LSKEKVIITYCWGPACNGATKAAAKFAQLGFR 100 (144) Q Consensus 69 l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~ 100 (144) ..+..+|+|.|..|-+.+...++..|...|++ T Consensus 93 ~~~~~~V~VHC~~G~gRSgt~~a~yl~~~g~~ 124 (159) T 1rxd_A 93 EEPGCCIAVHCVAGLGRAPVLVALALIEGGMK 124 (159) T ss_dssp HSTTCEEEEECSSSSTTHHHHHHHHHHHTTCC T ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC T ss_conf 48999589873699874699999999991979 No 72 >3fdf_A FR253; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, unknown function; 3.20A {Drosophila melanogaster} PDB: 3fmv_A Probab=56.50 E-value=9.8 Score=17.59 Aligned_cols=28 Identities=14% Similarity=0.121 Sum_probs=11.0 Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC Q ss_conf 999999961898889986452223223234543 Q T0592 21 ADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTA 53 (144) Q Consensus 21 ~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGA 53 (144) .|+...|++.. + +|++-..=..-.+||. T Consensus 21 MEAH~~L~~~G--f---~V~SfGtGs~VkLPGp 48 (195) T 3fdf_A 21 MEAHNFLAKKG--F---NVRSYGTGERVKLPGM 48 (195) T ss_dssp HHHHHHHHHTT--C---EEEEEBCSSSEEECSS T ss_pred HHHHHHHHHCC--C---CEEEECCCCCEECCCC T ss_conf 89999999879--9---5474058863058899 No 73 >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 Probab=54.71 E-value=11 Score=17.41 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=45.4 Q ss_pred CCCHHHHHHHHHCCC-CCEEEEECCCCCCCCCCCCCCCC-CCC--------HHHHHH---HHHH--CCCCCCCEEEEECC Q ss_conf 017999999996189-88899864522232232345433-337--------256556---5420--00357535888528 Q T0592 17 ETDIADLSIDIKKGY-EGIIVVDVRDAEAYKECHIPTAI-SIP--------GNKINE---DTTK--RLSKEKVIITYCWG 81 (144) Q Consensus 17 ~i~~~el~~~l~~g~-~~~vlIDvR~~~ey~~ghIpGAi-~ip--------~~~l~~---~~~~--~l~~d~~iVvyC~~ 81 (144) .-...++.+.|.... ..+.+++.+.+..|......+.+ ++| +..+.. .... .-++...+++.|.. T Consensus 41 rn~~~~v~~~L~~~h~~~y~v~Nl~~e~~Yd~~~f~~~v~~~p~~d~~~P~l~~l~~~~~~i~~~l~~~~~nvv~VHC~~ 120 (324) T 1d5r_A 41 RNNIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKA 120 (324) T ss_dssp CCBHHHHHHHHHHHSSSCEEEEEEESSCCCCTTSCSSCEEEEEECTTSCCCHHHHHHHHHHHHHHHTTTSCSEEEEECSS T ss_pred CCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC T ss_conf 59999999998841798079998789888980451775899257999989999999999999999954999579999389 Q ss_pred CCCCHHHHHHHHHHHCC-C Q ss_conf 87305678999999718-9 Q T0592 82 PACNGATKAAAKFAQLG-F 99 (144) Q Consensus 82 ~~~~~s~~aa~~L~~~G-~ 99 (144) |.+..+..++..|...| + T Consensus 121 G~gRtg~~i~ayL~~~~~~ 139 (324) T 1d5r_A 121 GKGRTGVMICAYLLHRGKF 139 (324) T ss_dssp SSHHHHHHHHHHHHHHTSC T ss_pred CCHHHHHHHHHHHHHHCCC T ss_conf 9605699999999983169 No 74 >2e58_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase, 2-codon SETS; HET: SAM; 2.50A {Aquifex aeolicus VF5} Probab=51.85 E-value=6.2 Score=18.78 Aligned_cols=40 Identities=18% Similarity=0.259 Sum_probs=27.2 Q ss_pred HHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHH Q ss_conf 42000357535888528873056789999997189806652795999 Q T0592 65 TTKRLSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYW 111 (144) Q Consensus 65 ~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW 111 (144) ....+.++..+++||+. ..+...|...||+|.-..| +..+ T Consensus 212 l~~~l~~~g~L~TYssa------g~VRr~L~~aGF~V~k~~G-~g~K 251 (308) T 2e58_A 212 IKERIDEKGYWVSYSSS------LSVRKSLLTLGFKVGSSRE-IGRK 251 (308) T ss_dssp HHTTEEEEEEEEESCCC------HHHHHHHHHTTCEEECCCC-C--- T ss_pred HHHHHCCCCEEEEEECH------HHHHHHHHHCCCEEEECCC-CCCC T ss_conf 99982899689998024------9999999987998996788-9988 No 75 >1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A* Probab=51.76 E-value=7.5 Score=18.29 Aligned_cols=38 Identities=16% Similarity=0.008 Sum_probs=29.7 Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHH Q ss_conf 3575358885288730567899999971898066527959 Q T0592 70 SKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIE 109 (144) Q Consensus 70 ~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~ 109 (144) .....+++||.+. ..+...+..|...|+++..|.|++. T Consensus 175 ~~~g~~LVFv~s~--~~a~~la~~L~~~g~~v~~lhg~~~ 212 (440) T 1yks_A 175 ADKRPTAWFLPSI--RAANVMAASLRKAGKSVVVLNRKTF 212 (440) T ss_dssp HCCSCEEEECSCH--HHHHHHHHHHHHTTCCEEECCSSSC T ss_pred HCCCCEEEEECHH--HHHHHHHHHHHHCCCEEEEECCCCH T ss_conf 3479869984669--9999999999848984999889973 No 76 >2obn_A Hypothetical protein; protein of unknown function DUF1611, structural genomics, joint center for structural genomics, JCSG; HET: PG4; 2.30A {Anabaena variabilis atcc 29413} Probab=51.33 E-value=12 Score=17.09 Aligned_cols=77 Identities=18% Similarity=0.076 Sum_probs=42.2 Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEE----ECCCCCCHHHHHHHHHHHC Q ss_conf 999999618988899864522232232345433337256556542000357535888----5288730567899999971 Q T0592 22 DLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITY----CWGPACNGATKAAAKFAQL 97 (144) Q Consensus 22 el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvy----C~~~~~~~s~~aa~~L~~~ 97 (144) ++.+. .+ .+..|+|||.|.... .+.... ...+ +.++|+. |+.|....+......|.+. T Consensus 119 el~~~-ak--~g~~i~DvR~p~~~l--------~~~~G~-----~~~~--~~~rvl~vGTDcavGK~tTal~L~~~l~~~ 180 (349) T 2obn_A 119 DLNAL-LQ--PGQLIWDVRKEPANL--------DVASGA-----ARTL--PCRRVLTVGTDMAIGKMSTSLELHWAAKLR 180 (349) T ss_dssp HHHHH-CC--TTCCEEETTCCCSSC--------CCCCSG-----GGGC--SSEEEEEEESSSSSSHHHHHHHHHHHHHHT T ss_pred HHHHH-HH--CCCEEEECCCCCCCC--------CCCCCC-----CCCC--CCCEEEEEECCCCHHHHHHHHHHHHHHHHC T ss_conf 89999-75--799899767899877--------744463-----3268--886899960563440899999999999975 Q ss_pred CCCEEEECCCHHHHHHCCC Q ss_conf 8980665279599987389 Q T0592 98 GFRVKELIGGIEYWRKENG 116 (144) Q Consensus 98 G~~v~~l~GG~~aW~~~G~ 116 (144) |+++..+.-|-.+|...|. T Consensus 181 G~~a~fiaTGQTGili~g~ 199 (349) T 2obn_A 181 GWRSKFLATGQTGVMLEGD 199 (349) T ss_dssp TCCEEEECCSHHHHHHHSC T ss_pred CCCEEEEECCCEEEEECCC T ss_conf 9974699627606764256 No 77 >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 2i6o_A* 2dxp_A* 2i6p_A* Probab=48.07 E-value=13 Score=16.78 Aligned_cols=82 Identities=15% Similarity=0.058 Sum_probs=40.9 Q ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCC-------------CCCCCCCCCH--------HHHHHHHHHCCCCCCCE Q ss_conf 01799999999618988899864522232232-------------3454333372--------56556542000357535 Q T0592 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKEC-------------HIPTAISIPG--------NKINEDTTKRLSKEKVI 75 (144) Q Consensus 17 ~i~~~el~~~l~~g~~~~vlIDvR~~~ey~~g-------------hIpGAi~ip~--------~~l~~~~~~~l~~d~~i 75 (144) .....++..+.+.|-. .||++++..|.... +--.-+++|. +++.......+..+.+| T Consensus 15 P~~~~~~~~l~~~gi~--~Iv~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~pi~D~~~p~~~~~~~~~~~~~~~~~~V 92 (161) T 2i6j_A 15 PYTENEILEWRKEGVK--RVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDGGVPSDSQFLTIMKWLLSEKEGN 92 (161) T ss_dssp CSSHHHHHHHHHHTCC--EEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTTCCCCHHHHHHHHHHHHHCCTTE T ss_pred CCCHHHHHHHHHCCCC--EEEECCCCCCCHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCE T ss_conf 9988999999977998--99988888630210453256899999869979996428999989999999999999779989 Q ss_pred EEEECCCCCCHHHHH-HHHHHHCCCC Q ss_conf 888528873056789-9999971898 Q T0592 76 ITYCWGPACNGATKA-AAKFAQLGFR 100 (144) Q Consensus 76 VvyC~~~~~~~s~~a-a~~L~~~G~~ 100 (144) +|.|..|-++.+..+ ++.+...|++ T Consensus 93 lVHC~aG~gRsgt~~a~yL~~~~g~s 118 (161) T 2i6j_A 93 LVHCVGGIGRTGTILASYLILTEGLE 118 (161) T ss_dssp EEECSSSSHHHHHHHHHHHHHHHCCC T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCC T ss_conf 99819999838999999999981799 No 78 >2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase, transferase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A Probab=45.74 E-value=12 Score=17.07 Aligned_cols=38 Identities=13% Similarity=-0.001 Sum_probs=29.2 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHH Q ss_conf 5753588852887305678999999718980665279599 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEY 110 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~a 110 (144) ....+++||.+. ..+...+..|...|++|..|.|++.. T Consensus 187 ~~gk~LVFv~S~--~~ae~la~~L~~~g~~v~~Lhg~~~~ 224 (451) T 2jlq_A 187 YQGKTVWFVPSI--KAGNDIANCLRKSGKRVIQLSRKTFD 224 (451) T ss_dssp CCSCEEEECSSH--HHHHHHHHHHHTTTCCEEEECTTTHH T ss_pred CCCCEEEEECCH--HHHHHHHHHHHHCCCEEEEECCCCCH T ss_conf 699999995988--99999999997489839993899979 No 79 >2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A Probab=45.27 E-value=14 Score=16.74 Aligned_cols=37 Identities=14% Similarity=0.024 Sum_probs=29.4 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHH Q ss_conf 575358885288730567899999971898066527959 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIE 109 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~ 109 (144) ....+++||.+. ......+..|...|+++..|.|++. T Consensus 354 ~~gk~LVFv~Sk--~~~eelA~~L~~~G~~v~~LHg~l~ 390 (618) T 2whx_A 354 YQGKTVWFVPSI--KAGNDIANCLRKSGKRVIQLSRKTF 390 (618) T ss_dssp CCSCEEEECSSH--HHHHHHHHHHHHTTCCEEEECTTTH T ss_pred CCCCEEEEECCH--HHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 589999997988--9999999999728992999179998 No 80 >2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Escherichia coli O157} Probab=44.93 E-value=8.7 Score=17.89 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=24.0 Q ss_pred HCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECC Q ss_conf 0003575358885288730567899999971898066527 Q T0592 67 KRLSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIG 106 (144) Q Consensus 67 ~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~G 106 (144) ..+.++.++++||+. ..+...|...||+|.-+.| T Consensus 201 ~~~~~~g~l~TYsaa------g~VRr~L~~aGF~V~k~~G 234 (257) T 2qy6_A 201 RLARPGGTLATFTSA------GFVRRGLQEAGFTMQKRKG 234 (257) T ss_dssp HHEEEEEEEEESCCB------HHHHHHHHHHTEEEEEECC T ss_pred HHCCCCCEEEEEECH------HHHHHHHHHCCCEEEECCC T ss_conf 974899889999752------9999999987997997889 No 81 >3bic_A Methylmalonyl-COA mutase, mitochondrial precursor; organic aciduria, methylmalonyl COA mutase deficiency, metabolic disease, structural genomics; 2.60A {Homo sapiens} Probab=44.20 E-value=15 Score=16.54 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=35.9 Q ss_pred CCCCCCEEEEECCCCC--CHHHHHHHHHHHCCC-CEEEECCCH------HHHHHCCCC Q ss_conf 0357535888528873--056789999997189-806652795------999873894 Q T0592 69 LSKEKVIITYCWGPAC--NGATKAAAKFAQLGF-RVKELIGGI------EYWRKENGE 117 (144) Q Consensus 69 l~~d~~iVvyC~~~~~--~~s~~aa~~L~~~G~-~v~~l~GG~------~aW~~~G~p 117 (144) +..+..||+.|..... .....++..|++.|- ++.++-||. ..++++|-. T Consensus 652 ~e~~a~vvgissl~~~~~~~vp~l~~~Lk~~G~~dI~VvvGG~~P~~d~~~l~~aGv~ 709 (762) T 3bic_A 652 VDADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGGVIPPQDYEFLFEVGVS 709 (762) T ss_dssp HHHTCSEEEEEECSSHHHHHHHHHHHHHHHHTCTTSEEEEEESCCGGGHHHHHHHTCC T ss_pred HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCC T ss_conf 9659899999568814699999999999966997767998078885769999977978 No 82 >2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavoprotein, 3D-structure, oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Probab=44.02 E-value=16 Score=16.40 Aligned_cols=44 Identities=18% Similarity=0.092 Sum_probs=25.3 Q ss_pred HHHHHHHHHCCC---CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEC Q ss_conf 565565420003---57535888528873056789999997189806652 Q T0592 59 NKINEDTTKRLS---KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELI 105 (144) Q Consensus 59 ~~l~~~~~~~l~---~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~ 105 (144) ..+........| +-+.|||.- ++...-.+|+.|.+.|++|.+|+ T Consensus 28 ~~~~~~~~~~~~~~~~~kkV~IIG---aGiaGLsaA~~L~~~G~~V~VlE 74 (376) T 2e1m_A 28 RYLDVLIDNGLNPPGPPKRILIVG---AGIAGLVAGDLLTRAGHDVTILE 74 (376) T ss_dssp HHHHHHHTSCSSSCCSCCEEEEEC---CBHHHHHHHHHHHHTSCEEEEEC T ss_pred HHHHHHHHCCCCCCCCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEEE T ss_conf 999998736899999998699989---78899999999986899089996 No 83 >1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A Probab=43.05 E-value=16 Score=16.31 Aligned_cols=16 Identities=6% Similarity=0.032 Sum_probs=7.8 Q ss_pred HHHCCCCCEEEEECCC Q ss_conf 9961898889986452 Q T0592 26 DIKKGYEGIIVVDVRD 41 (144) Q Consensus 26 ~l~~g~~~~vlIDvR~ 41 (144) .|.+...+++|||-++ T Consensus 24 ~La~~G~~V~vlE~~~ 39 (433) T 1d5t_A 24 IMSVNGKKVLHMDRNP 39 (433) T ss_dssp HHHHTTCCEEEECSSS T ss_pred HHHHCCCCEEEECCCC T ss_conf 9998899899988899 No 84 >3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, cytoplasm, phosphoprotein, protein binding; 2.80A {Homo sapiens} Probab=42.84 E-value=16 Score=16.29 Aligned_cols=31 Identities=10% Similarity=0.098 Sum_probs=20.0 Q ss_pred CEEEEECCCCCC-HHHHHHHHHHHCCCCEEEE Q ss_conf 358885288730-5678999999718980665 Q T0592 74 VIITYCWGPACN-GATKAAAKFAQLGFRVKEL 104 (144) Q Consensus 74 ~iVvyC~~~~~~-~s~~aa~~L~~~G~~v~~l 104 (144) .|++.|..|... .+--+++.|...|++|.++ T Consensus 134 ~VvVlcG~GnNGGDG~v~AR~L~~~G~~V~v~ 165 (306) T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILF 165 (306) T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEE T ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE T ss_conf 79999899988799999999998789838999 No 85 >1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: c.44.1.1 Probab=42.12 E-value=17 Score=16.24 Aligned_cols=14 Identities=29% Similarity=0.639 Sum_probs=8.1 Q ss_pred CCCCEEEEECCCCC Q ss_conf 57535888528873 Q T0592 71 KEKVIITYCWGPAC 84 (144) Q Consensus 71 ~d~~iVvyC~~~~~ 84 (144) .-..||++|+...| T Consensus 69 ~~D~Vitm~~~~~~ 82 (124) T 1y1l_A 69 DFDLIVTVCEESSC 82 (124) T ss_dssp GCSCEEEEECSSCC T ss_pred HHHHHHHCCCCCCC T ss_conf 65788750434346 No 86 >1zcl_A Protein tyrosine phosphatase 4A1; PRL-1 PTP4A dual specific phosphatase, hydrolase; 2.90A {Rattus norvegicus} PDB: 1x24_A Probab=42.00 E-value=17 Score=16.21 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=22.6 Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCCC Q ss_conf 3575358885288730567899999971898 Q T0592 70 SKEKVIITYCWGPACNGATKAAAKFAQLGFR 100 (144) Q Consensus 70 ~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~ 100 (144) +++.+|+|.|..|-+.....++..|...|++ T Consensus 115 ~~~~~V~VHC~aG~gRsgt~va~yL~~~g~~ 145 (180) T 1zcl_A 115 EPGCCIAVHSVAGLGRAPVLVALALIEGGMK 145 (180) T ss_dssp STTCEEEEEESSSSSHHHHHHHHHHHHTSSC T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHCCC T ss_conf 8999689862899863899999999993979 No 87 >1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYB; 2.0A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Probab=39.53 E-value=17 Score=16.17 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=20.8 Q ss_pred CCCCCCEEEEECCCCCCHH--------HHHHHHHHHCCCCEEEECCCHHHHHH Q ss_conf 0357535888528873056--------78999999718980665279599987 Q T0592 69 LSKEKVIITYCWGPACNGA--------TKAAAKFAQLGFRVKELIGGIEYWRK 113 (144) Q Consensus 69 l~~d~~iVvyC~~~~~~~s--------~~aa~~L~~~G~~v~~l~GG~~aW~~ 113 (144) +-..+++.+||...=...| ......|...|+++..+-||+.++.. T Consensus 32 l~~~~~~~~Y~G~dPT~~slHlG~lv~~~~l~~~q~~G~~~~~ligd~ta~ig 84 (432) T 1h3f_A 32 LKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFTGMIG 84 (432) T ss_dssp HHTCSCCEEEEEECTTCCSCBHHHHHHHHHHHHHHHTTCEEEEEECCCC---- T ss_pred HHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECC T ss_conf 96499978998466899753099999999999999879969999726626717 No 88 >2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A Probab=38.52 E-value=19 Score=15.89 Aligned_cols=33 Identities=9% Similarity=0.184 Sum_probs=21.3 Q ss_pred CCCEEEEECCCCCC-HHHHHHHHHHHCCCCEEEE Q ss_conf 75358885288730-5678999999718980665 Q T0592 72 EKVIITYCWGPACN-GATKAAAKFAQLGFRVKEL 104 (144) Q Consensus 72 d~~iVvyC~~~~~~-~s~~aa~~L~~~G~~v~~l 104 (144) .+.|++.|..|+-. ..-.++..|...||+|.++ T Consensus 79 ~~~I~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~ 112 (265) T 2o8n_A 79 PPTVLVICGPGNNGGDGLVCARHLKLFGYQPTIY 112 (265) T ss_dssp SCEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEE T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE T ss_conf 9839999889987699999999999869906999 No 89 >1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A* Probab=38.49 E-value=19 Score=15.88 Aligned_cols=37 Identities=24% Similarity=0.395 Sum_probs=29.4 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHH Q ss_conf 575358885288730567899999971898066527959 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIE 109 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~ 109 (144) ..+..++||.+. ......+..|...|+.+..+.||+. T Consensus 235 ~~~~~IIf~~t~--~~~e~la~~l~~~g~~~~~~h~~l~ 271 (523) T 1oyw_A 235 RGKSGIIYCNSR--AKVEDTAARLQSKGISAAAYHAGLE 271 (523) T ss_dssp TTCCEEEECSSH--HHHHHHHHHHHHTTCCEEEECTTSC T ss_pred CCCCEEEEEECC--HHHHHHHHHHHHCCCCCCCCCCCCC T ss_conf 688479998434--0389999999866998412247889 No 90 >1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* Probab=37.91 E-value=19 Score=15.83 Aligned_cols=37 Identities=14% Similarity=0.134 Sum_probs=25.0 Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCC--CEE---EECCCH Q ss_conf 7535888528873056789999997189--806---652795 Q T0592 72 EKVIITYCWGPACNGATKAAAKFAQLGF--RVK---ELIGGI 108 (144) Q Consensus 72 d~~iVvyC~~~~~~~s~~aa~~L~~~G~--~v~---~l~GG~ 108 (144) .-.|.+||..|.+..++.....|+++|+ +|. -|.||. T Consensus 28 ~Gli~iytGdGKGKTTAAlGlalRA~G~G~rV~ivQFlKg~~ 69 (196) T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTW 69 (196) T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSS T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCC T ss_conf 876999924998728899999999843898799999861785 No 91 >3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, alpha chain; structural genomics, PSI-2, protein structure initiative; 1.90A {Thermoplasma acidophilum} Probab=37.47 E-value=20 Score=15.79 Aligned_cols=24 Identities=17% Similarity=0.088 Sum_probs=15.4 Q ss_pred HHHHHHHHHCCCCCEEEEECCCCC Q ss_conf 999999996189888998645222 Q T0592 20 IADLSIDIKKGYEGIIVVDVRDAE 43 (144) Q Consensus 20 ~~el~~~l~~g~~~~vlIDvR~~~ 43 (144) ..++.+.|++..-++-+||+|.-. T Consensus 28 a~ea~~~L~~~gi~~~vi~~~~~~ 51 (118) T 3ju3_A 28 ILDVIEDLKEEGISANLLYLKMFS 51 (118) T ss_dssp HHHHHHHHHHTTCCEEEEEECSSC T ss_pred HHHHHHHHHHCCCCEEEEEEEECC T ss_conf 999999999769624477765753 No 92 >2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A Probab=37.21 E-value=20 Score=15.76 Aligned_cols=37 Identities=8% Similarity=-0.013 Sum_probs=29.1 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHH Q ss_conf 575358885288730567899999971898066527959 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIE 109 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~ 109 (144) .+..+++||.+. ..+...+..|...|++|..|.|++. T Consensus 170 ~~~k~LVFv~S~--~~a~~la~~L~~~g~~v~~Lhg~~~ 206 (431) T 2v6i_A 170 FDGRTVWFVHSI--KQGAEIGTCLQKAGKKVLYLNRKTF 206 (431) T ss_dssp CSSCEEEECSSH--HHHHHHHHHHHHTTCCEEEESTTTH T ss_pred CCCCEEEEECCH--HHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 699999998999--9999999999868991999579999 No 93 >1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 intergenic region; yeast hypothetical protein, structural genomics, selenomethionine, PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1 Probab=36.78 E-value=20 Score=15.72 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=22.3 Q ss_pred CCCCEEEEECCCCCCH-HHHHHHHHHHCCCCEEEEC Q ss_conf 5753588852887305-6789999997189806652 Q T0592 71 KEKVIITYCWGPACNG-ATKAAAKFAQLGFRVKELI 105 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~-s~~aa~~L~~~G~~v~~l~ 105 (144) ..+.|+++|..|+-.+ +--+++.|...|++|.++- T Consensus 57 ~~~~v~il~G~GNNGGDGlv~Ar~L~~~G~~V~v~~ 92 (246) T 1jzt_A 57 KGKHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFY 92 (246) T ss_dssp HTCEEEEEECSSHHHHHHHHHHHHHHHTTCCEEEEC T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEE T ss_conf 798499998899984779999999997798479998 No 94 >1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hyperthermostable protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus HB8} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A* Probab=36.60 E-value=20 Score=15.70 Aligned_cols=41 Identities=10% Similarity=0.132 Sum_probs=31.0 Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHH Q ss_conf 0357535888528873056789999997189806652795999 Q T0592 69 LSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYW 111 (144) Q Consensus 69 l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW 111 (144) ...+..|++.|.+. .++.+.+..|...|+++.++.+.+..= T Consensus 436 ~~~g~RVli~~~Tk--~~aerL~e~L~~~gi~a~~lh~d~~~~ 476 (664) T 1c4o_A 436 AARGERTLVTVLTV--RMAEELTSFLVEHGIRARYLHHELDAF 476 (664) T ss_dssp HHTTCEEEEECSSH--HHHHHHHHHHHHTTCCEEEECTTCCHH T ss_pred HHCCCEEEEEECCC--HHHHHHHHHHHHCCCEEEEECCCCCHH T ss_conf 85698189980671--689999999997897389825886224 No 95 >3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, cytoplasm, phosphoprotein, protein binding; 2.20A {Homo sapiens} Probab=36.35 E-value=21 Score=15.68 Aligned_cols=31 Identities=13% Similarity=0.244 Sum_probs=20.0 Q ss_pred CEEEEECCCCCCH--HHHHHHHHHHCCCCEEEEC Q ss_conf 3588852887305--6789999997189806652 Q T0592 74 VIITYCWGPACNG--ATKAAAKFAQLGFRVKELI 105 (144) Q Consensus 74 ~iVvyC~~~~~~~--s~~aa~~L~~~G~~v~~l~ 105 (144) .|++.|..|+ ++ .--+++.|...|++|.++- T Consensus 87 ~VlVlcG~GN-NGGDGlv~AR~L~~~G~~V~v~l 119 (259) T 3d3k_A 87 TVALLCGPHV-KGAQGISCGRHLANHDVQVILFL 119 (259) T ss_dssp EEEEEECSSH-HHHHHHHHHHHHHHTTCEEEEEC T ss_pred EEEEEECCCC-CHHHHHHHHHHHHHCCCEEEEEE T ss_conf 7999989998-87999999999997899599996 No 96 >1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B Probab=34.01 E-value=22 Score=15.45 Aligned_cols=34 Identities=24% Similarity=0.129 Sum_probs=13.6 Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCC-CEEEECCC Q ss_conf 535888528873056789999997189-80665279 Q T0592 73 KVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGG 107 (144) Q Consensus 73 ~~iVvyC~~~~~~~s~~aa~~L~~~G~-~v~~l~GG 107 (144) +.|++.|.+ +.-||..|-..|+..+- .+....+| T Consensus 4 k~ILFVC~g-N~cRSpmAEal~~~~~~~~~~~~Sag 38 (139) T 1jl3_A 4 KIIYFLCTG-NSCRSQMAEGWAKQYLGDEWKVYSAG 38 (139) T ss_dssp EEEEEEESS-SSSHHHHHHHHHHHHSCTTEEEEEEE T ss_pred CEEEEEECC-CCHHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 879998499-81689999999998463651137777 No 97 >1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii OT3} Probab=33.51 E-value=23 Score=15.40 Aligned_cols=19 Identities=26% Similarity=0.316 Sum_probs=8.6 Q ss_pred HHHHHHHHCCCCCEEEEECC Q ss_conf 99999996189888998645 Q T0592 21 ADLSIDIKKGYEGIIVVDVR 40 (144) Q Consensus 21 ~el~~~l~~g~~~~vlIDvR 40 (144) +.+..+.+.| -+++|||-. T Consensus 19 s~A~~L~~~G-~~V~llE~~ 37 (382) T 1y56_B 19 TIAHELAKRG-EEVTVIEKR 37 (382) T ss_dssp HHHHHHHHTT-CCEEEECSS T ss_pred HHHHHHHHCC-CCEEEECCC T ss_conf 9999999889-939998699 No 98 >2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A Probab=33.42 E-value=23 Score=15.43 Aligned_cols=37 Identities=11% Similarity=-0.020 Sum_probs=28.1 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHH Q ss_conf 575358885288730567899999971898066527959 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIE 109 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~ 109 (144) ....+++||.+. ......+..|...|+++..|.|++. T Consensus 189 ~~g~iLVFv~s~--~~~e~la~~L~~~g~~v~~lh~~l~ 225 (459) T 2z83_A 189 YAGKTVWFVASV--KMGNEIAMCLQRAGKKVIQLNRKSY 225 (459) T ss_dssp CCSCEEEECSCH--HHHHHHHHHHHHTTCCEEEESTTCC T ss_pred CCCCEEEEECCH--HHHHHHHHHHHHCCCEEEEECCCCC T ss_conf 379999997979--9999999999858981999689999 No 99 >1yj5_A 5' polynucleotide kinase-3' phosphatase catalytic domain; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: c.108.1.9 c.37.1.1 Probab=32.65 E-value=22 Score=15.46 Aligned_cols=33 Identities=9% Similarity=0.087 Sum_probs=24.8 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEE Q ss_conf 575358885288730567899999971898066 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKE 103 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~ 103 (144) +...+|+.|.-+|+..|..+...+...||.+.+ T Consensus 223 ~~p~liilvG~PGSGKST~a~~~~~~~~~~~in 255 (383) T 1yj5_A 223 PNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVN 255 (383) T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGGGTCEEEE T ss_pred CCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEE T ss_conf 997599995689986779999874049939993 No 100 >1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM- barrel, rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A* Probab=32.52 E-value=24 Score=15.30 Aligned_cols=13 Identities=15% Similarity=0.634 Sum_probs=7.6 Q ss_pred HHHHHHHHHCCCC Q ss_conf 7899999971898 Q T0592 88 TKAAAKFAQLGFR 100 (144) Q Consensus 88 ~~aa~~L~~~G~~ 100 (144) ......|.+.||+ T Consensus 102 ~~~~~~~~~~G~~ 114 (137) T 1ccw_A 102 PDVEKRFKDMGYD 114 (137) T ss_dssp HHHHHHHHHTTCS T ss_pred HHHHHHHHHCCCC T ss_conf 8799999975988 No 101 >3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta fold and the C-terminal all beta domain., structural genomics, PSI-2; 2.00A {Nostoc SP} Probab=32.31 E-value=24 Score=15.28 Aligned_cols=27 Identities=7% Similarity=-0.033 Sum_probs=14.4 Q ss_pred CEEEEECCCCC---CHHHHHHHHHHHCCCCE Q ss_conf 35888528873---05678999999718980 Q T0592 74 VIITYCWGPAC---NGATKAAAKFAQLGFRV 101 (144) Q Consensus 74 ~iVvyC~~~~~---~~s~~aa~~L~~~G~~v 101 (144) .+++.|. +.. .-+.++...|...|++| T Consensus 216 ~~~lVt~-Pe~~~i~ea~R~~~~l~~~gl~V 245 (374) T 3igf_A 216 AAFLVTT-ADPLEVVSVRYLWGSAQQIGLTI 245 (374) T ss_dssp EEEEEEC-SCHHHHHHHHHHHHHHHHHTCCE T ss_pred EEEEEEC-CCCCHHHHHHHHHHHHHHCCCCE T ss_conf 8999967-75215999999999999769954 No 102 >3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, pyridoxal phosphate, PSI-2, protein structure initiative; 1.70A {Deinococcus radiodurans} Probab=32.11 E-value=24 Score=15.26 Aligned_cols=59 Identities=15% Similarity=0.016 Sum_probs=34.9 Q ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH--------CCCC-EEEECCCHHHHHHCCCCCCC Q ss_conf 6556542000357535888528873056789999997--------1898-06652795999873894137 Q T0592 60 KINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQ--------LGFR-VKELIGGIEYWRKENGEVEG 120 (144) Q Consensus 60 ~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~--------~G~~-v~~l~GG~~aW~~~G~pve~ 120 (144) ++.+.....+|.+...|+||.+| .-+..+|.++.+ -|.+ +..++||+.+|....+.+.. T Consensus 76 ~lae~L~~~~~~~~~~v~~~~sG--seA~e~AiklAr~~~~~~~~tgr~~Ii~~~~~yHG~t~~a~~~s~ 143 (430) T 3i4j_A 76 EYAGRLARFVGLPTFRFWAVSGG--SEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASG 143 (430) T ss_dssp HHHHHHHHHTTCTTCEEEEESSH--HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC------------- T ss_pred HHHHHHHHHCCCCCCEEEECCCH--HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC T ss_conf 99999998669981459942865--899999999999978863899988899986886879888643368 No 103 >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} Probab=31.48 E-value=25 Score=15.20 Aligned_cols=24 Identities=8% Similarity=0.084 Sum_probs=13.9 Q ss_pred HHHHHHHHHHHCCCC--EEEECCCHH Q ss_conf 567899999971898--066527959 Q T0592 86 GATKAAAKFAQLGFR--VKELIGGIE 109 (144) Q Consensus 86 ~s~~aa~~L~~~G~~--v~~l~GG~~ 109 (144) .|.+....|++.|.+ ...+.|+-. T Consensus 206 ~s~~l~~aL~~~g~~~~~~~~~g~~H 231 (276) T 3hxk_A 206 NSLKYCDRLSKHQVPFEAHFFESGPH 231 (276) T ss_dssp HHHHHHHHHHTTTCCEEEEEESCCCT T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCC T ss_conf 99999999998899889999794986 No 104 >3bjr_A Putative carboxylesterase; NP_784706.1, structural genomics, joint center for structural genomics, JCSG; 2.09A {Lactobacillus plantarum WCFS1} Probab=31.40 E-value=25 Score=15.19 Aligned_cols=26 Identities=12% Similarity=0.010 Sum_probs=16.3 Q ss_pred HHHHHHHHHHHCCCC--EEEECCCHHHH Q ss_conf 567899999971898--06652795999 Q T0592 86 GATKAAAKFAQLGFR--VKELIGGIEYW 111 (144) Q Consensus 86 ~s~~aa~~L~~~G~~--v~~l~GG~~aW 111 (144) .+...+..|++.|.+ ..++.|+-.+| T Consensus 223 ~s~~l~~~L~~~g~~~el~~~~~~~Hgf 250 (283) T 3bjr_A 223 NTLAYATALATAKIPYELHVFKHGPHGL 250 (283) T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSHHH T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCC T ss_conf 9999999999789988999979698676 No 105 >3bv0_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; biotin biosynthesis, pyridoxal phosphate, S-adenosyl-L-methionine; HET: PLP; 2.21A {Mycobacterium tuberculosis} Probab=29.65 E-value=25 Score=15.16 Aligned_cols=58 Identities=14% Similarity=-0.007 Sum_probs=31.4 Q ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH--------CCC-CEEEECCCHHHHHHCCCCCC Q ss_conf 6556542000357535888528873056789999997--------189-80665279599987389413 Q T0592 60 KINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQ--------LGF-RVKELIGGIEYWRKENGEVE 119 (144) Q Consensus 60 ~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~--------~G~-~v~~l~GG~~aW~~~G~pve 119 (144) ++.+...+.+|.+-..|++|.+| .-+..++.+|.+ -|- ++..++||+.+|.-..+.+. T Consensus 102 ~la~~L~~~~p~~~~~v~f~~sG--seA~e~AlklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~t 168 (437) T 3bv0_A 102 RLAKLLVDITPAGLDTVFFSDSG--SVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSIC 168 (437) T ss_dssp HHHHHHHHHSSTTEEEEEEESSH--HHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHTTS T ss_pred HHHHHHHHHCCCCCCEEEECCCC--HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHEEEC T ss_conf 99999998677553158724860--28999999999999875289999779998288777762011213 No 106 >3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B Probab=29.20 E-value=27 Score=14.97 Aligned_cols=40 Identities=20% Similarity=0.251 Sum_probs=29.5 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHH Q ss_conf 575358885288730567899999971898066527959998 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWR 112 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~aW~ 112 (144) .....++||.+. ......+..|...|+++..+.|++.... T Consensus 265 ~~~~~lIF~~t~--~~~~~~~~~l~~~g~~~~~~h~~~~~~~ 304 (412) T 3fht_A 265 TIAQAMIFCHTR--KTASWLAAELSKEGHQVALLSGEMMVEQ 304 (412) T ss_dssp SSSEEEEECSSH--HHHHHHHHHHHHTTCCCEEECTTSCHHH T ss_pred CCCCEEEEEECC--HHHHHHHHHHHHCCCEEEEEECCCHHHH T ss_conf 788489996566--5799999999868985999807833788 No 107 >2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B Probab=28.84 E-value=27 Score=14.93 Aligned_cols=32 Identities=16% Similarity=0.027 Sum_probs=19.3 Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHH-HHHCCCC Q ss_conf 0357535888528873056789999-9971898 Q T0592 69 LSKEKVIITYCWGPACNGATKAAAK-FAQLGFR 100 (144) Q Consensus 69 l~~d~~iVvyC~~~~~~~s~~aa~~-L~~~G~~ 100 (144) +.+.+.|.|+|..|...++..++.. +...|+. T Consensus 114 ~~~g~~VLVHC~~G~sRS~t~~iaYLm~~~~~s 146 (182) T 2j16_A 114 TTKREKILIHAQCGLSRSATLIIAYIMKYHNLS 146 (182) T ss_dssp HHTTCCEEEEESSCCSHHHHHHHHHHHHHTTCC T ss_pred HHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC T ss_conf 986997999899998737999999999861999 No 108 >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomics, JCSG, PSI, protein structure initiative; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 Probab=28.40 E-value=21 Score=15.64 Aligned_cols=53 Identities=15% Similarity=0.167 Sum_probs=34.8 Q ss_pred HHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC-CEEEECCCHHHHHHCCCC Q ss_conf 6542000357535888528873056789999997189-806652795999873894 Q T0592 63 EDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGE 117 (144) Q Consensus 63 ~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G~-~v~~l~GG~~aW~~~G~p 117 (144) ......|.++-.+|+||-+. ....+....|...|| .+..++=-...|...+.. T Consensus 197 ~~~~~~LKpGG~lvi~~P~i--~Q~~~~~~~L~~~gF~~i~~~E~l~R~w~~~~~~ 250 (277) T 1o54_A 197 DKCWEALKGGGRFATVCPTT--NQVQETLKKLQELPFIRIEVWESLFRPYKPVPER 250 (277) T ss_dssp HHHHHHEEEEEEEEEEESSH--HHHHHHHHHHHHSSEEEEEEECCCCCCEECCTTS T ss_pred HHHHHCCCCCCEEEEEECCH--HHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCC T ss_conf 99996068996999996978--8999999999988980689999996788966884 No 109 >1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B* Probab=27.89 E-value=29 Score=14.83 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=18.7 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEE Q ss_conf 575358885288730567899999971898066 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKE 103 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~ 103 (144) ..+.+.+.|.|.....+..|+..|.+.|+++.+ T Consensus 200 ~G~dv~Iis~G~~v~~al~aa~~L~~~gi~~~V 232 (324) T 1w85_B 200 EGKDITIIAYGAMVHESLKAAAELEKEGISAEV 232 (324) T ss_dssp CCSSEEEEECTTHHHHHHHHHHHHHHTTCCEEE T ss_pred ECCCEEEEECCCHHHHHHHHHHHHHHCCCCEEE T ss_conf 389789997673289999999999976997799 No 110 >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic resolution; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Probab=26.55 E-value=30 Score=14.68 Aligned_cols=13 Identities=0% Similarity=0.166 Sum_probs=6.1 Q ss_pred HHCCCCCEEEEEC Q ss_conf 9618988899864 Q T0592 27 IKKGYEGIIVVDV 39 (144) Q Consensus 27 l~~g~~~~vlIDv 39 (144) |.+...+++||.. T Consensus 24 La~~g~~VLvLEa 36 (504) T 1n4w_A 24 LGEAGVQTLMLEM 36 (504) T ss_dssp HHHTTCCEEEEES T ss_pred HHHCCCEEEEEEC T ss_conf 9868692999957 No 111 >2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni} Probab=26.49 E-value=25 Score=15.15 Aligned_cols=14 Identities=0% Similarity=0.117 Sum_probs=5.5 Q ss_pred EEEECCCCCCCCCC Q ss_conf 99864522232232 Q T0592 35 IVVDVRDAEAYKEC 48 (144) Q Consensus 35 vlIDvR~~~ey~~g 48 (144) +-||-..-..+..| T Consensus 35 ~~v~SAG~~~~~~G 48 (156) T 2gi4_A 35 FFINSAGTSGEHDG 48 (156) T ss_dssp CEEEEEBSSCSSTT T ss_pred EEEECCCCCCCCCC T ss_conf 57855754455578 No 112 >1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structural genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.12 Probab=26.19 E-value=31 Score=14.64 Aligned_cols=22 Identities=5% Similarity=-0.079 Sum_probs=11.3 Q ss_pred HHHHHHHHHCCCCCEEEEECCC Q ss_conf 9999999961898889986452 Q T0592 20 IADLSIDIKKGYEGIIVVDVRD 41 (144) Q Consensus 20 ~~el~~~l~~g~~~~vlIDvR~ 41 (144) +-.+.++|.+..-++.++|.+. T Consensus 13 ~Rka~~~L~~~~i~~~~~d~~k 34 (114) T 1rw1_A 13 MKKARTWLDEHKVAYDFHDYKA 34 (114) T ss_dssp HHHHHHHHHHTTCCEEEEEHHH T ss_pred HHHHHHHHHHCCCCEEEEECCC T ss_conf 9999999997699659997303 No 113 >2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Probab=26.06 E-value=29 Score=14.79 Aligned_cols=22 Identities=32% Similarity=0.445 Sum_probs=12.3 Q ss_pred HHHHHHCCCCEEEECCCHHHHH Q ss_conf 9999971898066527959998 Q T0592 91 AAKFAQLGFRVKELIGGIEYWR 112 (144) Q Consensus 91 a~~L~~~G~~v~~l~GG~~aW~ 112 (144) ...|..+|+++..|.||+.+.. T Consensus 55 L~~fq~~Gh~~i~liGg~T~~I 76 (419) T 2ts1_A 55 MRRFQQAGHRPIALVGGATGLI 76 (419) T ss_dssp HHHHHHTTCEEEEEECTTGGGT T ss_pred HHHHHHCCCEEEEEECCCEEEE T ss_conf 9999987994999964550572 No 114 >2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G* Probab=26.00 E-value=31 Score=14.62 Aligned_cols=10 Identities=20% Similarity=0.544 Sum_probs=4.7 Q ss_pred CCEEEEECCC Q ss_conf 8889986452 Q T0592 32 EGIIVVDVRD 41 (144) Q Consensus 32 ~~~vlIDvR~ 41 (144) ..+++||-++ T Consensus 35 ~~VlvlE~~~ 44 (453) T 2bcg_G 35 KKVLHIDKQD 44 (453) T ss_dssp CCEEEECSSS T ss_pred CCEEEECCCC T ss_conf 9899988999 No 115 >1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydrolase; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A* Probab=25.89 E-value=31 Score=14.61 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=15.7 Q ss_pred CEEEEECCCCCCHHHH---HHHHHHHCCCCEEEEC Q ss_conf 3588852887305678---9999997189806652 Q T0592 74 VIITYCWGPACNGATK---AAAKFAQLGFRVKELI 105 (144) Q Consensus 74 ~iVvyC~~~~~~~s~~---aa~~L~~~G~~v~~l~ 105 (144) .|++.+..||...|.. .+..|.+.|++|..++ T Consensus 328 ~i~~~sGKGGvGKTT~a~~lA~~la~~G~rVllvd 362 (589) T 1ihu_A 328 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTT 362 (589) T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 89999489987269999999999996899379995 No 116 >2b3z_A Riboflavin biosynthesis protein RIBD; alpha/beta/alpha, deaminase domain and reductase domain, hydrolase, oxidoreductase; 2.41A {Bacillus subtilis} SCOP: c.71.1.2 c.97.1.2 PDB: 2d5n_A* 3ex8_A* Probab=25.10 E-value=31 Score=14.62 Aligned_cols=17 Identities=24% Similarity=0.245 Sum_probs=7.7 Q ss_pred HHHHHHCCCCEEEECCC Q ss_conf 99999718980665279 Q T0592 91 AAKFAQLGFRVKELIGG 107 (144) Q Consensus 91 a~~L~~~G~~v~~l~GG 107 (144) ...|...|+.-..++|| T Consensus 288 l~~L~~~Gi~~lLVEGG 304 (373) T 2b3z_A 288 LKILAEEGIMSVYVEGG 304 (373) T ss_dssp HHHHHHTTCCEEEEEEC T ss_pred HHHHHHCCCCEEEEEEH T ss_conf 99986659988999277 No 117 >2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} Probab=24.97 E-value=32 Score=14.51 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=19.4 Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHH-HHHHCCCC Q ss_conf 0035753588852887305678999-99971898 Q T0592 68 RLSKEKVIITYCWGPACNGATKAAA-KFAQLGFR 100 (144) Q Consensus 68 ~l~~d~~iVvyC~~~~~~~s~~aa~-~L~~~G~~ 100 (144) .+.....|+++|..|...+...++. .+...|++ T Consensus 83 ~~~~~~~VLVHC~~G~~RS~~v~~aYLm~~~~~~ 116 (177) T 2oud_A 83 AHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 116 (177) T ss_dssp HHHTTCEEEEECSSSSSHHHHHHHHHHHHTSCCC T ss_pred HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC T ss_conf 8734974898888888855999999999984979 No 118 >2g6v_A Riboflavin biosynthesis protein RIBD; RIBD APO structure, structural genomics, structural proteomics in europe, spine, hydrolase; 2.60A {Escherichia coli} PDB: 2obc_A* 2o7p_A* Probab=24.68 E-value=33 Score=14.47 Aligned_cols=15 Identities=7% Similarity=0.069 Sum_probs=5.3 Q ss_pred HHHHCCCCEEEECCC Q ss_conf 999718980665279 Q T0592 93 KFAQLGFRVKELIGG 107 (144) Q Consensus 93 ~L~~~G~~v~~l~GG 107 (144) .|.+.|+.-..++|| T Consensus 314 ~L~~~Gi~sLLVEGG 328 (402) T 2g6v_A 314 QLGKQQINSIWVEAG 328 (402) T ss_dssp HHHHTTCCEEEECCC T ss_pred HHHHCCCCEEEEEEH T ss_conf 998769999998527 No 119 >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Probab=24.49 E-value=33 Score=14.45 Aligned_cols=10 Identities=20% Similarity=0.278 Sum_probs=4.3 Q ss_pred HHHHHHHCCC Q ss_conf 9999997189 Q T0592 90 AAAKFAQLGF 99 (144) Q Consensus 90 aa~~L~~~G~ 99 (144) +...|++.|. T Consensus 355 ~~~~L~~~g~ 364 (446) T 3hlk_A 355 ACKRLQAHGR 364 (446) T ss_dssp HHHHHHHTTC T ss_pred HHHHHHHCCC T ss_conf 9999997699 No 120 >1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Probab=24.18 E-value=33 Score=14.42 Aligned_cols=37 Identities=22% Similarity=0.135 Sum_probs=24.0 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEC-----CCHHH Q ss_conf 57535888528873056789999997189806652-----79599 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELI-----GGIEY 110 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~-----GG~~a 110 (144) ..+.|+|.-.+ ...-.||..|.+.|++|.+++ ||.-. T Consensus 372 ~~kkVvVIGaG---PAGL~AA~~aa~~G~~Vtl~E~~~~lGG~~~ 413 (671) T 1ps9_A 372 QKKNLAVVGAG---PAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671) T ss_dssp SCCEEEEECCS---HHHHHHHHHHHTTTCEEEEEESSSSSCTTHH T ss_pred CCCEEEEECCC---HHHHHHHHHHHHHCCCEEEEEECCCCCCEEE T ss_conf 46459998974---7789999999872176479942154330573 No 121 >1j9i_A GPNU1 DBD;, terminase small subunit; DNA binding domain, homodimer, viral assembly, winged helix-turn-helix, viral protein; NMR {Enterobacteria phage lambda} SCOP: a.6.1.5 Probab=23.93 E-value=25 Score=15.22 Aligned_cols=17 Identities=24% Similarity=0.386 Sum_probs=12.8 Q ss_pred HHHHHHCCCCCCCCCCC Q ss_conf 59998738941377776 Q T0592 108 IEYWRKENGEVEGTLGA 124 (144) Q Consensus 108 ~~aW~~~G~pve~~~~~ 124 (144) +..|+..|+|+...-+. T Consensus 19 it~W~~~G~Pv~~~Ggk 35 (68) T 1j9i_A 19 IQNWQEQGMPVLRGGGK 35 (68) T ss_dssp HHHHTTTTCCCSSCCCS T ss_pred HHHHHHCCCCEECCCCC T ss_conf 99999879983517989 No 122 >2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A* Probab=23.44 E-value=35 Score=14.33 Aligned_cols=37 Identities=19% Similarity=0.434 Sum_probs=29.1 Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHH Q ss_conf 575358885288730567899999971898066527959 Q T0592 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIE 109 (144) Q Consensus 71 ~d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~ 109 (144) +....++||.+- ..+...+..|...|+.+..+.||+. T Consensus 266 ~~~~~iIf~~sr--~~~e~la~~L~~~g~~~~~~ha~~~ 302 (591) T 2v1x_A 266 KGQSGIIYCFSQ--KDSEQVTVSLQNLGIHAGAYHANLE 302 (591) T ss_dssp TTCEEEEECSSH--HHHHHHHHHHHHTTCCEEEECTTSC T ss_pred CCCCEEEEEECC--HHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 688469997001--2189999998645831577517768 No 123 >3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* Probab=23.34 E-value=35 Score=14.32 Aligned_cols=21 Identities=19% Similarity=0.303 Sum_probs=9.9 Q ss_pred HHHHHHHHCCCCCEEEEECCC Q ss_conf 999999961898889986452 Q T0592 21 ADLSIDIKKGYEGIIVVDVRD 41 (144) Q Consensus 21 ~el~~~l~~g~~~~vlIDvR~ 41 (144) +.++.+.++|..+++|||-+. T Consensus 20 stA~~La~~G~~~V~vlE~~~ 40 (438) T 3dje_A 20 STALHLARRGYTNVTVLDPYP 40 (438) T ss_dssp HHHHHHHHTTCCCEEEEESSC T ss_pred HHHHHHHHCCCCCEEEECCCC T ss_conf 999999967999889984999 No 124 >2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae} Probab=23.32 E-value=35 Score=14.32 Aligned_cols=66 Identities=12% Similarity=0.053 Sum_probs=36.8 Q ss_pred CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC Q ss_conf 79999999961898889986452223223234543333725655654200035753588852887305678999999718 Q T0592 19 DIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQLG 98 (144) Q Consensus 19 ~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~G 98 (144) +..++.+.++...++++|+|++=|+ +..=++.... ...++..++|+..... ..+ ....+.| T Consensus 43 ~g~eal~~l~~~~~DlvilDi~mP~------------~dG~el~~~i-r~~~~~~~vi~~t~~~--e~~----~~a~~~G 103 (143) T 2qv0_A 43 DGLDVLKFLQHNKVDAIFLDINIPS------------LDGVLLAQNI-SQFAHKPFIVFITAWK--EHA----VEAFELE 103 (143) T ss_dssp CHHHHHHHHHHCCCSEEEECSSCSS------------SCHHHHHHHH-TTSTTCCEEEEEESCC--TTH----HHHHHTT T ss_pred CHHHHHHHHHHCCCCEEEECCCCCC------------CCHHHHHHHH-HHCCCCCEEEEEECCH--HHH----HHHHHCC T ss_conf 9999999998379999998899989------------9989999999-9609999799997888--999----9999859 Q ss_pred CCEEE Q ss_conf 98066 Q T0592 99 FRVKE 103 (144) Q Consensus 99 ~~v~~ 103 (144) ..-+. T Consensus 104 a~dyl 108 (143) T 2qv0_A 104 AFDYI 108 (143) T ss_dssp CSEEE T ss_pred CCEEE T ss_conf 99999 No 125 >2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP- binding, ligase, mitochondrion, nucleotide-binding; HET: YSA; 2.20A {Homo sapiens} Probab=23.25 E-value=35 Score=14.31 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=30.9 Q ss_pred CCCCCCCEEEEECCCCCCHH--------HHHHHHHHHCCCCEEEECCCHHHHHHC Q ss_conf 00357535888528873056--------789999997189806652795999873 Q T0592 68 RLSKEKVIITYCWGPACNGA--------TKAAAKFAQLGFRVKELIGGIEYWRKE 114 (144) Q Consensus 68 ~l~~d~~iVvyC~~~~~~~s--------~~aa~~L~~~G~~v~~l~GG~~aW~~~ 114 (144) ...+.+++.+||...=...| -.....|...|+++.+|-||+.++... T Consensus 40 ~~~~~~p~~vY~G~DPT~~sLHlGhlv~l~~L~~~q~~G~~~i~Ligd~ta~IgD 94 (356) T 2pid_A 40 RGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNVIALVGGATARLGD 94 (356) T ss_dssp ------CCEEEEEECCSSSSCBHHHHHHHHHHHHHHHTTCEEEEEECTTGGGTCC T ss_pred HHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCC T ss_conf 7642798469980478987520888999999999998599789994564312379 No 126 >2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, PSI-2, protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} Probab=22.63 E-value=36 Score=14.23 Aligned_cols=33 Identities=6% Similarity=0.008 Sum_probs=19.3 Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHH-HHHHCCCC Q ss_conf 0035753588852887305678999-99971898 Q T0592 68 RLSKEKVIITYCWGPACNGATKAAA-KFAQLGFR 100 (144) Q Consensus 68 ~l~~d~~iVvyC~~~~~~~s~~aa~-~L~~~G~~ 100 (144) .+.....|+|+|..|..+++..++. .+...+.+ T Consensus 121 ~~~~g~~VLVHC~~G~sRS~tiv~AYLm~~~~~s 154 (195) T 2q05_A 121 CDQRNEPVLVHCAAGVNRSGAMILAYLMSKNKES 154 (195) T ss_dssp HHHTTCCEEEECSSSSSHHHHHHHHHHHHHCCSS T ss_pred HHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC T ss_conf 9845997999899877320999999999973998 No 127 >2wv9_A Flavivirin protease NS2B regulatory subunit, flavivirin protease NS3 catalytic subunit...; NS2B-NS3 protease; 2.75A {Murray valley encephalitis virus} Probab=22.38 E-value=36 Score=14.20 Aligned_cols=37 Identities=14% Similarity=0.002 Sum_probs=29.3 Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHH Q ss_conf 753588852887305678999999718980665279599 Q T0592 72 EKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEY 110 (144) Q Consensus 72 d~~iVvyC~~~~~~~s~~aa~~L~~~G~~v~~l~GG~~a 110 (144) ...+++||.+. .....++..|...|++|..|.|++.. T Consensus 410 ~G~iLVFv~s~--~eie~la~~L~~~G~~V~~lhs~l~~ 446 (673) T 2wv9_A 410 AGKTVWFVASV--KMSNEIAQCLQRAGKRVIQLNRKSYD 446 (673) T ss_dssp CSCEEEECSSH--HHHHHHHHHHHTTTCCEEEECSSSHH T ss_pred CCCEEEEECCH--HHHHHHHHHHHHCCCCEEEECCCCCH T ss_conf 99999995999--99999999998689819997798977 No 128 >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} Probab=22.32 E-value=36 Score=14.20 Aligned_cols=80 Identities=11% Similarity=0.028 Sum_probs=38.0 Q ss_pred CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC--CCCCHH--------HHH---HHHHHCCCCCCCEEEEECCCCCC Q ss_conf 79999999961898889986452223223234543--333725--------655---65420003575358885288730 Q T0592 19 DIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTA--ISIPGN--------KIN---EDTTKRLSKEKVIITYCWGPACN 85 (144) Q Consensus 19 ~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGA--i~ip~~--------~l~---~~~~~~l~~d~~iVvyC~~~~~~ 85 (144) .+.++....+.|=. .||++....+-.....+|- .++|.. .+. .........+.+|++.|..|.++ T Consensus 25 ~~~~~~~L~~~gI~--~Vv~l~~~~~~~~~~~~~i~~~~~p~~D~~~p~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~R 102 (151) T 2img_A 25 LPAHYQFLLDLGVR--HLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGR 102 (151) T ss_dssp SHHHHHHHHHTTEE--EEEECSSSCCTTGGGCTTSEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSH T ss_pred CHHHHHHHHHCCCC--EEEEECCCCCCHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC T ss_conf 77899999986998--9999358889614532982899788988998799999999999999986599189985899885 Q ss_pred HHHHHH-HHHHHCCCC Q ss_conf 567899-999971898 Q T0592 86 GATKAA-AKFAQLGFR 100 (144) Q Consensus 86 ~s~~aa-~~L~~~G~~ 100 (144) ++..++ +.+...|++ T Consensus 103 S~~v~~ayL~~~~~~~ 118 (151) T 2img_A 103 TGTMLACYLVKERGLA 118 (151) T ss_dssp HHHHHHHHHHHHHCCC T ss_pred HHHHHHHHHHHHCCCC T ss_conf 5899999999974999 No 129 >1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A* Probab=22.11 E-value=37 Score=14.17 Aligned_cols=21 Identities=14% Similarity=0.260 Sum_probs=8.5 Q ss_pred HHHHHHHHHCCCCCEEEEECC Q ss_conf 999999996189888998645 Q T0592 20 IADLSIDIKKGYEGIIVVDVR 40 (144) Q Consensus 20 ~~el~~~l~~g~~~~vlIDvR 40 (144) ++-++..|++...++++||.= T Consensus 24 a~nlA~~La~~g~kVllID~D 44 (257) T 1wcv_1 24 AINLAAYLARLGKRVLLVDLD 44 (257) T ss_dssp HHHHHHHHHHTTCCEEEEECC T ss_pred HHHHHHHHHHCCCCEEEEECC T ss_conf 999999999789978999679 No 130 >2ax3_A Hypothetical protein TM0922; TM0922, hypothetical protein, structural genomics, joint center for structural genomics, JCSG; 2.27A {Thermotoga maritima MSB8} SCOP: c.72.1.4 c.104.1.1 Probab=21.97 E-value=37 Score=14.15 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=16.3 Q ss_pred CCCEEEEECCCCCCHH--HHHHHHHHHCCCCEEE Q ss_conf 7535888528873056--7899999971898066 Q T0592 72 EKVIITYCWGPACNGA--TKAAAKFAQLGFRVKE 103 (144) Q Consensus 72 d~~iVvyC~~~~~~~s--~~aa~~L~~~G~~v~~ 103 (144) .+.|+++|..|+ |+. --++..|...||+|.+ T Consensus 52 ~~~i~il~G~GN-NGGDGlv~Ar~L~~~g~~V~v 84 (502) T 2ax3_A 52 DYRFLVLCGGGN-NGGDGFVVARNLLGVVKDVLV 84 (502) T ss_dssp TCEEEEEECSSH-HHHHHHHHHHHHTTTSSEEEE T ss_pred CCEEEEEECCCC-CHHHHHHHHHHHHHCCCCEEE T ss_conf 996999988997-899999999999868995799 No 131 >2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 1mkp_A Probab=21.94 E-value=37 Score=14.15 Aligned_cols=32 Identities=16% Similarity=0.154 Sum_probs=19.6 Q ss_pred CCCCCCEEEEECCCCCCHHHHHHH-HHHHCCCC Q ss_conf 035753588852887305678999-99971898 Q T0592 69 LSKEKVIITYCWGPACNGATKAAA-KFAQLGFR 100 (144) Q Consensus 69 l~~d~~iVvyC~~~~~~~s~~aa~-~L~~~G~~ 100 (144) +.++..|.|+|..|...+...++. .+...|.+ T Consensus 82 ~~~~~~VLVHC~~G~~RS~~vv~aYLm~~~~~s 114 (155) T 2hxp_A 82 LSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLS 114 (155) T ss_dssp HHTTCEEEEECSSSSSHHHHHHHHHHHHHHTCC T ss_pred HHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCC T ss_conf 633560567855678854999999999982989 No 132 >3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* Probab=21.56 E-value=38 Score=14.10 Aligned_cols=10 Identities=30% Similarity=0.660 Sum_probs=5.0 Q ss_pred CCEEEEECCC Q ss_conf 8889986452 Q T0592 32 EGIIVVDVRD 41 (144) Q Consensus 32 ~~~vlIDvR~ 41 (144) .+++|++-|+ T Consensus 53 ~~V~v~Ek~~ 62 (397) T 3hdq_A 53 QRVLIVDRRP 62 (397) T ss_dssp CCEEEECSSS T ss_pred CCEEEEECCC T ss_conf 9479997889 No 133 >2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} Probab=21.23 E-value=38 Score=14.06 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=20.6 Q ss_pred CCCCCCCEEEEECCCCCCHHHHH-HHHHHHCCCC Q ss_conf 00357535888528873056789-9999971898 Q T0592 68 RLSKEKVIITYCWGPACNGATKA-AAKFAQLGFR 100 (144) Q Consensus 68 ~l~~d~~iVvyC~~~~~~~s~~a-a~~L~~~G~~ 100 (144) .+.....|.|+|..|...++..+ ++.+...|++ T Consensus 86 ~~~~g~~VLVHC~~G~~RS~~vv~ayLm~~~~~~ 119 (154) T 2r0b_A 86 SLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMK 119 (154) T ss_dssp HHHTTCCEEEECSSSSSHHHHHHHHHHHHHHTCC T ss_pred HCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCC T ss_conf 3036762899868766322999999999973999 No 134 >2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12} Probab=21.19 E-value=38 Score=14.06 Aligned_cols=22 Identities=18% Similarity=0.315 Sum_probs=8.2 Q ss_pred EEEEECCCCCCHHHHHHHHHHHC Q ss_conf 58885288730567899999971 Q T0592 75 IITYCWGPACNGATKAAAKFAQL 97 (144) Q Consensus 75 iVvyC~~~~~~~s~~aa~~L~~~ 97 (144) |++.|.+- .-||..|-..|+.+ T Consensus 25 ILFVCtgN-~cRSpmAEai~~~~ 46 (167) T 2fek_A 25 ILVVCVGN-ICRSPTAERLLQRY 46 (167) T ss_dssp EEEEESSS-SSHHHHHHHHHHHH T ss_pred EEEEECCC-HHHHHHHHHHHHHH T ss_conf 89990894-87999999999970 No 135 >2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G* Probab=20.92 E-value=39 Score=14.02 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=7.5 Q ss_pred HHHHHHHHHCCCCEEEEC Q ss_conf 789999997189806652 Q T0592 88 TKAAAKFAQLGFRVKELI 105 (144) Q Consensus 88 ~~aa~~L~~~G~~v~~l~ 105 (144) -.+|+.|.+.|++|.+|+ T Consensus 52 L~aA~~L~~~G~~V~VlE 69 (495) T 2vvm_A 52 LTATRDLTVAGFKTLLLE 69 (495) T ss_dssp HHHHHHHHHTTCCEEEEC T ss_pred HHHHHHHHHCCCCEEEEE T ss_conf 999999986899889992 No 136 >2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630} Probab=20.29 E-value=40 Score=13.94 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=22.5 Q ss_pred CCHHHHHHHHHCCCCCEEEEECCCCC Q ss_conf 17999999996189888998645222 Q T0592 18 TDIADLSIDIKKGYEGIIVVDVRDAE 43 (144) Q Consensus 18 i~~~el~~~l~~g~~~~vlIDvR~~~ 43 (144) .+..++.+.+.+..++++|+|++-|+ T Consensus 35 ~~~~eAl~~l~~~~~dlillD~~mP~ 60 (136) T 2qzj_A 35 YNCEEAIGKIFSNKYDLIFLEIILSD 60 (136) T ss_dssp SSHHHHHHHHHHCCCSEEEEESEETT T ss_pred CCHHHHHHHHHCCCCCEEEEECCCCC T ss_conf 99999998875179999997089999 No 137 >3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} PDB: 2zwm_A Probab=20.17 E-value=40 Score=13.93 Aligned_cols=67 Identities=10% Similarity=0.020 Sum_probs=37.8 Q ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC Q ss_conf 17999999996189888998645222322323454333372565565420003575358885288730567899999971 Q T0592 18 TDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQL 97 (144) Q Consensus 18 i~~~el~~~l~~g~~~~vlIDvR~~~ey~~ghIpGAi~ip~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aa~~L~~~ 97 (144) -+..++.+.+.+..++++|+|++-|+. .| -++...... ..+.++|+..... .. ......... T Consensus 33 ~~~~~al~~l~~~~~dlii~D~~mP~~------~G------~~~~~~ir~--~~~~~iI~lt~~~-~~---~~~~~a~~~ 94 (120) T 3f6p_A 33 HDGNEAVEMVEELQPDLILLDIMLPNK------DG------VEVCREVRK--KYDMPIIMLTAKD-SE---IDKVIGLEI 94 (120) T ss_dssp SSHHHHHHHHHTTCCSEEEEETTSTTT------HH------HHHHHHHHT--TCCSCEEEEEESS-CH---HHHHHHHHT T ss_pred CCHHHHHHHHHCCCCCEEEECCCCCCC------CH------HHHHHHHHC--CCCCCEEEEECCC-CH---HHHHHHHHC T ss_conf 999999999970899999985999998------99------999999972--7999689997669-99---999999985 Q ss_pred CCCEE Q ss_conf 89806 Q T0592 98 GFRVK 102 (144) Q Consensus 98 G~~v~ 102 (144) |..-+ T Consensus 95 G~~d~ 99 (120) T 3f6p_A 95 GADDY 99 (120) T ss_dssp TCCEE T ss_pred CCCEE T ss_conf 99836 Done!