Query         T0593 3NGW, Archaeoglobus fulgidus, 208 residues
Match_columns 208
No_of_seqs    108 out of 6539
Neff          10.4
Searched_HMMs 22458
Date          Mon Jul  5 09:09:13 2010
Command       /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0593.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0593.hhr 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2e8b_A Probable molybdopterin- 100.0 6.1E-33 2.7E-37  207.4  12.6  182    2-193    16-199 (201)
  2 1e5k_A Molybdopterin-guanine d 100.0 4.4E-31   2E-35  196.7  15.2  183    1-190     7-192 (201)
  3 3d5n_A Q97W15_sulso; NESG, SSR 100.0 1.2E-30 5.4E-35  194.2  13.5  184    1-193     1-189 (197)
  4 2waw_A MOBA relate protein; un 100.0 1.3E-29 5.9E-34  188.2  17.3  185    1-195     6-198 (199)
  5 2wee_A MOBA-related protein; u 100.0 1.2E-28 5.4E-33  182.7  15.7  179    2-190     7-193 (197)
  6 1w77_A 2C-methyl-D-erythritol   99.9 2.1E-24 9.3E-29  158.4  15.5  190    1-195     5-227 (228)
  7 2px7_A 2-C-methyl-D-erythritol  99.9   2E-24 8.7E-29  158.5  11.2  183    1-196    24-235 (236)
  8 1ezi_A CMP-N-acetylneuraminic   99.9 3.8E-25 1.7E-29  162.6   5.8  191    3-196     7-227 (228)
  9 1vpa_A 2-C-methyl-D-erythritol  99.9 1.2E-23 5.4E-28  154.0  13.2  185    1-196    13-231 (234)
 10 3f1c_A Putative 2-C-methyl-D-e  99.9 6.3E-23 2.8E-27  149.9  15.1  196    2-201     5-241 (246)
 11 1i52_A 4-diphosphocytidyl-2-C-  99.9 8.3E-23 3.7E-27  149.2  13.3  192    2-198     9-233 (236)
 12 1vgw_A 4-diphosphocytidyl-2C-m  99.9 6.4E-23 2.9E-27  149.8  12.4  185    3-194     9-230 (231)
 13 1jyk_A LICC protein, CTP:phosp  99.9 1.2E-23 5.4E-28  154.0   5.9  189    1-195    26-253 (254)
 14 2dpw_A Hypothetical protein TT  99.9 6.7E-21   3E-25  138.3  13.7  110    2-117     4-118 (232)
 15 3hl3_A Glucose-1-phosphate thy  99.9 5.5E-21 2.4E-25  138.8  12.1  189    1-196    25-261 (269)
 16 1w55_A ISPD/ISPF bifunctional   99.8 2.6E-21 1.1E-25  140.7   9.4  183    1-190     4-203 (371)
 17 2vsh_A TARI, 2-C-methyl-D-eryt  99.8 9.9E-20 4.4E-24  131.5  13.6   47    1-47      3-52  (236)
 18 3juk_A UDP-glucose pyrophospho  99.8 1.8E-19 8.1E-24  130.0  14.8  195    1-200     3-277 (281)
 19 1mc3_A Glucose-1-phosphate thy  99.8 1.1E-20 4.8E-25  137.1   8.0  191    1-196     4-244 (296)
 20 1lvw_A Glucose-1-phosphate thy  99.8 5.8E-20 2.6E-24  132.9  11.4  192    1-197     4-245 (295)
 21 2ux8_A Glucose-1-phosphate uri  99.8 5.8E-20 2.6E-24  132.9  10.8  193    1-198    15-283 (297)
 22 1tzf_A Glucose-1-phosphate cyt  99.8 1.3E-19 5.6E-24  131.0  11.0   55    1-55      3-62  (259)
 23 2pa4_A UTP-glucose-1-phosphate  99.8 1.1E-18 4.9E-23  125.5  14.7  186    1-190    13-278 (323)
 24 2e3d_A UTP--glucose-1-phosphat  99.8 2.9E-18 1.3E-22  123.1  11.5  184    2-190    10-277 (302)
 25 1fxo_A Glucose-1-phosphate thy  99.8 2.5E-18 1.1E-22  123.5   9.9  193    1-197     3-244 (293)
 26 2ggo_A 401AA long hypothetical  99.7 4.3E-18 1.9E-22  122.1   9.3  188    1-195     1-225 (401)
 27 1vic_A 3-deoxy-manno-octuloson  99.7 6.5E-17 2.9E-21  115.4  15.2  194    2-200     4-259 (262)
 28 2v0h_A Bifunctional protein GL  99.7 2.2E-17 9.6E-22  118.1  12.2  116    1-116     6-129 (456)
 29 3dk5_A Bifunctional protein GL  99.7 5.4E-17 2.4E-21  115.8  12.7  116    2-117     8-139 (495)
 30 3k8d_A 3-deoxy-manno-octuloson  99.7 1.4E-16 6.4E-21  113.4  14.3  113    2-115    20-139 (264)
 31 1hv9_A UDP-N-acetylglucosamine  99.7 4.9E-17 2.2E-21  116.1  11.9  116    1-116     6-129 (456)
 32 1h7e_A 3-deoxy-manno-octuloson  99.7   8E-16 3.5E-20  109.1  14.9  113    2-115     4-121 (245)
 33 1qwj_A Cytidine monophospho-N-  99.7   2E-16   9E-21  112.5  11.7  190    1-196     4-224 (229)
 34 1hm9_A GLMU, UDP-N-acetylgluco  99.7 4.9E-16 2.2E-20  110.3  12.1  116    2-117    13-136 (468)
 35 1yp2_A Glucose-1-phosphate ade  99.7 1.9E-16 8.5E-21  112.7   8.5  114    1-116    21-167 (451)
 36 3brk_X Glucose-1-phosphate ade  99.6 4.9E-15 2.2E-19  104.6   7.0  114    1-116    13-157 (420)
 37 2cu2_A Putative mannose-1-phos  99.5 2.7E-13 1.2E-17   94.6  10.8  116    1-117     1-137 (337)
 38 2qh5_A PMI, ALGA, mannose-6-ph  99.4 8.7E-13 3.9E-17   91.7  10.8  117    1-117     5-141 (308)
 39 2i5e_A Hypothetical protein MM  98.4 1.7E-06 7.6E-11   55.5   8.5  172    1-188     4-181 (211)
 40 3cgx_A Putative nucleotide-dip  98.3 2.5E-06 1.1E-10   54.5   8.2  101   26-127    37-146 (242)
 41 2icy_A Probable UTP-glucose-1-  97.9   6E-06 2.7E-10   52.4   4.0   47    3-49     82-137 (469)
 42 2i5k_A UTP--glucose-1-phosphat  97.9 5.5E-06 2.4E-10   52.6   3.6   46    3-48     95-149 (488)
 43 3gue_A UTP-glucose-1-phosphate  97.9   1E-05 4.5E-10   51.1   4.6   46    3-48     79-133 (484)
 44 2oeg_A UTP-glucose-1-phosphate  97.9 1.1E-05 4.9E-10   50.9   4.3   46    3-48     78-132 (505)
 45 1jv1_A Glcnac1P uridyltransfer  97.8 2.2E-05 9.9E-10   49.1   4.9   36    2-37    104-144 (505)
 46 2yqc_A UDP-N-acetylglucosamine  97.7 3.4E-05 1.5E-09   48.1   4.4   36    2-37    105-145 (486)
 47 3bcv_A Putative glycosyltransf  45.7      13 0.00058   16.0   8.5   94   24-117    15-118 (240)
 48 3ckj_A Putative uncharacterize  32.3      21 0.00095   14.8   6.7   97   21-117    54-166 (329)
 49 1j2j_B ADP-ribosylation factor  28.8      25  0.0011   14.4   2.5   23  176-198    16-38  (45)
 50 1jkx_A GART;, phosphoribosylgl  24.0      24  0.0011   14.5   1.5   88    1-103     1-99  (212)
 51 3d0o_A L-LDH 1, L-lactate dehy  22.3      33  0.0015   13.7   1.8   40    2-42     76-116 (317)
 52 2fb9_A D-alanine:D-alanine lig  20.9      27  0.0012   14.2   1.1   12    1-12      4-15  (322)

No 1  
>2e8b_A Probable molybdopterin-guanine dinucleotide biosynthesis protein A; putative protein, molybdenum cofactor, structural genomics, NPPSFA; 1.61A {Aquifex aeolicus VF5}
Probab=100.00  E-value=6.1e-33  Score=207.40  Aligned_cols=182  Identities=24%  Similarity=0.301  Sum_probs=146.4

Q ss_pred             EEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHH
Q ss_conf             17886488753566697602667843798999999726872078725213344431010000023441236778888775
Q T0593             2 KVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIHAALR   81 (208)
Q Consensus         2 ~~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (208)
                      ++||||||+|||||+||+|++++|+|||+|+++.+++....++|++.....  .......+..+..++.+++.++.+++.
T Consensus        16 ~~vILAgG~ssRmg~~K~ll~i~Gkpli~~vi~~l~~~~~~iiVv~~~~~~--~~~~~~~~i~d~~~~~G~~~~i~~~l~   93 (201)
T 2e8b_A           16 TCYVLAGGKSKRFGEDKLLYEIKGKKVIERVYETAKSVFKEVYIVAKDREK--FSFLNAPVVLDEFEESASIIGLYTALK   93 (201)
T ss_dssp             EEEEEEESSCCCCSTTHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCSGG--GGGGTCCEEECCCSSCCHHHHHHHHHH
T ss_pred             EEEEECCCCCCCCCCCEECCEECCEEHHHHHHHHHHHCCCEEEEEECCHHH--HHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             799989944630899915348999978999998865207527998311665--333226543453334680799999987


Q ss_pred             HC--CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCEE
Q ss_conf             04--9789982788768889999999998507987999738923202210006789999999871205789999752612
Q T0593            82 HF--GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKHDYPEPLLAYYAESAADELERAILQGIRKILVPLERLNVV  159 (208)
Q Consensus        82 ~~--~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~  159 (208)
                      ..  +.+++++||+||++++.++.+++.+.   ..+++...++.+|++++|++++++.+...+.+|++++..+++.....
T Consensus        94 ~~~~~~~lv~~~D~P~i~~~~i~~li~~~~---~~~~~~~~~~~~pl~~~y~~~~~~~l~~~l~~g~~~~~~~l~~~~~~  170 (201)
T 2e8b_A           94 HAKEENVFVLSGDLPLMKKETVLYVLENFK---EPVSVAKTEKLHTLVGVYSKKLLEKIEERIKKGDYRIWALLKDVGYN  170 (201)
T ss_dssp             HCSSSEEEEEETTCTTCCHHHHHHHHHTCC---SSEEEEESSSEEEEEEEEEGGGHHHHHHHHHTTCCCHHHHHHHHCCE
T ss_pred             HCCCCEEEEEECCCCCCCHHHHHHHHHHCC---CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCE
T ss_conf             423652899726778798999999997187---65467568973200022289999999999983992489999878977


Q ss_pred             EECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             3214501442286442036989899999999999
Q T0593           160 YYPVEKLRKFDKELISFFNINTPDDLKRAEEICS  193 (208)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~  193 (208)
                      .+..     .......|+||||||||++++++.+
T Consensus       171 ~i~~-----~~~~~~~~~ninT~eDl~~~~~i~n  199 (201)
T 2e8b_A          171 EVEI-----PEELRYTLLNMNTKEDLKRILAIEN  199 (201)
T ss_dssp             EEEC-----CGGGGGGGCCSCCC-----------
T ss_pred             EEEC-----CCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             9978-----6787670018999999999998875


No 2  
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.97  E-value=4.4e-31  Score=196.73  Aligned_cols=183  Identities=21%  Similarity=0.279  Sum_probs=141.2

Q ss_pred             CEEEEECCCCCCCCCC-CCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
Q ss_conf             9178864887535666-976026678437989999997268720787252133444310100000234412367788887
Q T0593             1 MKVAVLVGGVGRRIGM-EKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIHAA   79 (208)
Q Consensus         1 m~~vIlAaG~gtRlg~-pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (208)
                      |+|||||||+|||||+ ||+|++|+|+|||+|++++++..+...++++....+..................+...+....
T Consensus         7 ~~aiILAaG~gsRmg~~pK~ll~i~G~pll~~~i~~l~~~~~~~~vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (201)
T 1e5k_A            7 ITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSV   86 (201)
T ss_dssp             EEEEEECCCCCSSSCSSCGGGSEETTEEHHHHHHHHHHHHCSCEEEECSSSHHHHHTTSCCEECCCTTCCCSHHHHHHHH
T ss_pred             CEEEEECCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCEECCCCCCCHHHHHHH
T ss_conf             22899888877689898915425899889999999974228825886067699875402564202116887414799998


Q ss_pred             H--HHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCC
Q ss_conf             7--50497899827887688899999999985079879997389232022100067899999998712057899997526
Q T0593            80 L--RHFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKHDYPEPLLAYYAESAADELERAILQGIRKILVPLERLN  157 (208)
Q Consensus        80 ~--~~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~  157 (208)
                      +  ...+.++++.+|+||+.++.++++++.+.+. ..++....+...+..+.+.+...+.+..++.+|.++++.++....
T Consensus        87 ~~~~~~~~~~v~~~D~p~~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~l~~~~~~~~  165 (201)
T 1e5k_A           87 MQQEAGEWFLFCPCDTPYIPPDLAARLNHQRKDA-PVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMVFMRLAG  165 (201)
T ss_dssp             HHHCCSSEEEEEETTCTTCCTTHHHHHHHTCTTC-SEEEEECSSCEEEEEEEEETTHHHHHHHHHHTTCCCHHHHHHHTT
T ss_pred             HHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCC-CEEEEEECCCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf             6761378089994898668899999999842799-989995089436756786388999999999847830999998779


Q ss_pred             EEEECCCCEEEECCCHHHCCCCCCHHHHHHHHH
Q ss_conf             123214501442286442036989899999999
Q T0593           158 VVYYPVEKLRKFDKELISFFNINTPDDLKRAEE  190 (208)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~  190 (208)
                      ...+.      +......|+||||||||++|++
T Consensus       166 ~~~v~------~~~~~~~~~dIdTpeDl~~~~~  192 (201)
T 1e5k_A          166 GHAVD------FSDHKDAFVNVNTPEELARWQE  192 (201)
T ss_dssp             CEEEE------CTTSTTTTCCCCSHHHHHTTC-
T ss_pred             CCEEE------EECCCCCCCCCCCHHHHHHHHH
T ss_conf             81899------8589661529397999999998


No 3  
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.97  E-value=1.2e-30  Score=194.20  Aligned_cols=184  Identities=20%  Similarity=0.279  Sum_probs=131.5

Q ss_pred             CE--EEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf             91--7886488753566697602667843798999999726872078725213344431010000023441236778888
Q T0593             1 MK--VAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIHA   78 (208)
Q Consensus         1 m~--~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ||  |||||||+|||||+||+|++++|||||+|++++++......+++... .+..................+...++..
T Consensus         1 Mk~~avIlAgG~ssRmg~~K~ll~i~G~pli~~~i~~l~~~~~~~vv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (197)
T 3d5n_A            1 MNIGVIILAAGEGKRFGGDKLLAKIDNTPIIMRTIRIYGDLEKIIIVGKYV-NEMLPLLMDQIVIYNPFWNEGISTSLKL   79 (197)
T ss_dssp             CCEEEEEECSCCTTCCCSSGGGSBSSSSBHHHHHHHHTTTSBCCEEECTTH-HHHGGGCTTSCEEECTTGGGCHHHHHHH
T ss_pred             CCCEEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHCCCCEEEEECCH-HHHHHHHCCCCCEECCCCCCCCHHHHHH
T ss_conf             973199989956654968972069999889999999821789759991688-9999874276502213334771899999


Q ss_pred             HHHH---CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             7750---4978998278876888999999999850798799973892320221000678999999987120578999975
Q T0593            79 ALRH---FGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKHDYPEPLLAYYAESAADELERAILQGIRKILVPLER  155 (208)
Q Consensus        79 ~~~~---~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~  155 (208)
                      ++..   .+.++++.+|+|+++++.++++++.+.+++..++....+ ....+.++++++++.+..+  .++.+.+.++..
T Consensus        80 al~~~~~~~~~lv~~~D~P~i~~~~i~~ll~~~~~~~~~v~~~~~g-~~~~P~~~~~~~~~~l~~~--~~~~~~~~~l~~  156 (197)
T 3d5n_A           80 GLRFFKDYDAVLVALGDMPFVTKEDVNKIINTFKPNCKAVIPTHKG-ERGNPVLISKSLFNEIEKL--RGDVGARVILNK  156 (197)
T ss_dssp             HHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTCCTTCSEEEEEETT-EECSCEEEEHHHHHHHHHC--CTTCCTHHHHTT
T ss_pred             HHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECC-CCCCCEEECHHHHHHHHHH--CCCHHHHHHHHH
T ss_conf             9862346773454368857789999999999764179889999789-5267318879999999874--024159999986


Q ss_pred             CCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             26123214501442286442036989899999999999
Q T0593           156 LNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICS  193 (208)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~  193 (208)
                      ..     ...+.....+...|+||||||||+++++++.
T Consensus       157 ~~-----~~~~~~~~~~~~~~~dIdTpeDl~~l~~~~~  189 (197)
T 3d5n_A          157 IK-----IEELCFIECSEGVLIDIDKKEDLMRLRDFHP  189 (197)
T ss_dssp             SC-----GGGEEEEECCGGGTCCTTTC-----------
T ss_pred             CC-----CCCEEEEECCCCCEECCCCHHHHHHHHHHCC
T ss_conf             76-----5748998279782778999999999984569


No 4  
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.97  E-value=1.3e-29  Score=188.23  Aligned_cols=185  Identities=16%  Similarity=0.151  Sum_probs=132.2

Q ss_pred             CEEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHH----HHHCCCEEECCCCCHHHHHHH
Q ss_conf             9178864887535666976026678437989999997268720787252133444----310100000234412367788
Q T0593             1 MKVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLS----SRYEAEFIWDLHKGVGSIAGI   76 (208)
Q Consensus         1 m~~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~   76 (208)
                      +.|||||||+|||||+||+|++++|+|||+|+++++...+...++++.++.....    ......+........++..++
T Consensus         6 i~aiIlAgG~s~R~G~~K~ll~i~g~~li~~~i~~~~~~~~~~iiVv~~~~~~~i~~~~~~~~~~~i~~~~~~~G~~~si   85 (199)
T 2waw_A            6 VTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVELDGLDIVLVDDAGLGCSSSL   85 (199)
T ss_dssp             EEEEEEESSCCTTTTSCGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCCTTSEEEECCCCCTTCCCHH
T ss_pred             EEEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf             28999679887159789602189995299999998636464058873376188998665311321122334555765206


Q ss_pred             HHHHHHC----CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHCCHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             8877504----978998278876888999999999850798799973892320221000678999999987120578999
Q T0593            77 HAALRHF----GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKHDYPEPLLAYYAESAADELERAILQGIRKILVP  152 (208)
Q Consensus        77 ~~~~~~~----~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~  152 (208)
                      ..++...    +.+++++||+||++++.++++++.+.++...++...++..+|  .++++++++.+.+.  .|+.+++.+
T Consensus        86 ~~~l~~~~~~~d~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~v~~~~~~~g~P--~l~~~~~~~~l~~l--~~d~g~r~~  161 (199)
T 2waw_A           86 KSALTWVDPTAEGIVLMLGDQPGITASAVASLIAGGRGATIAVCEYANGIGHP--FWVSRGVFGDLAEL--HGDKGVWRL  161 (199)
T ss_dssp             HHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHTTCSEEEEEETTEEEEE--EEEEGGGHHHHHTC--SSTTCHHHH
T ss_pred             HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCC--EEECHHHHHHHHHC--CCCCCHHHH
T ss_conf             78888641456734997686168999999999984789987999879921687--78889999999851--277368999


Q ss_pred             HHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             9752612321450144228644203698989999999999971
Q T0593           153 LERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKM  195 (208)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~  195 (208)
                      +.....      .+..+..+...|+||||||||+++.+.+.+.
T Consensus       162 ~~~~~~------~~~~v~~d~~~~~didTpeDl~~l~~~~~r~  198 (199)
T 2waw_A          162 IESGRH------GVRRIRVDADVPLDVDTWDDYERLLASVVRL  198 (199)
T ss_dssp             HHSSSS------CEEEEECSSCCCCCCSSHHHHHHHHHHHHHT
T ss_pred             HHHCCC------CEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             984938------7799978988005799999999998652567


No 5  
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A
Probab=99.96  E-value=1.2e-28  Score=182.71  Aligned_cols=179  Identities=17%  Similarity=0.148  Sum_probs=127.4

Q ss_pred             EEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHH----HHHCCCEEECCCCCHHHHHHHH
Q ss_conf             178864887535666976026678437989999997268720787252133444----3101000002344123677888
Q T0593             2 KVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLS----SRYEAEFIWDLHKGVGSIAGIH   77 (208)
Q Consensus         2 ~~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~   77 (208)
                      .+||||||+|||||+||+|++++|+|||+|+++++.+.+...++++.++.....    ......+........+...++.
T Consensus         7 ~~vILAgG~s~Rmg~~K~ll~~~g~~li~~~i~~l~~~~~~~iivv~~~~~~~~~~~~~~~~~~~v~~~~~~~G~~~si~   86 (197)
T 2wee_A            7 TGVVLAAGRSNRLGTPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGAASAVRAAMALDGTDVVVVEDVERGCAASLR   86 (197)
T ss_dssp             EEEEEECCCCTTTSSCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCCTTSEEEECC----CCHHHHH
T ss_pred             EEEEECCCCCCCCCCCCCCCEECCEEHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             69998998871596897401889990899999999864054133025742123212212432211112344567542045


Q ss_pred             HHHHHC----CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHCCHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             877504----9789982788768889999999998507987999738923202210006789999999871205789999
Q T0593            78 AALRHF----GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKHDYPEPLLAYYAESAADELERAILQGIRKILVPL  153 (208)
Q Consensus        78 ~~~~~~----~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~  153 (208)
                      .++...    +.++++.||+||++++.++++++.+.+....++....++.+|  .+|.+.+++.+...  .|+.+++.++
T Consensus        87 ~~l~~l~~~~~~~lv~~~D~P~l~~~~i~~Li~~~~~~~~~v~~~~~~~g~P--~~~~~~~~~~l~~~--~gd~g~~~~~  162 (197)
T 2wee_A           87 VALARVHPRATGIVLMLGDQPQVAPATLRRIIDVGPATEIMVCRYADGVGHP--FWFSRTVFGELARL--HGDKGVWKLV  162 (197)
T ss_dssp             HHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHHGGGSSEEEEEETTEEEEE--EEEEGGGHHHHHTC--CSTTHHHHHH
T ss_pred             HHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCC--EEECHHHHHHHHHH--CCCCCHHHHH
T ss_conf             5553312466604786176056899999999984478983999976865781--38789999999963--3783679999


Q ss_pred             HHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHH
Q ss_conf             7526123214501442286442036989899999999
Q T0593           154 ERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEE  190 (208)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~  190 (208)
                      .....      ....+..+...++||||||||+++.+
T Consensus       163 ~~~~~------~~~~v~~d~~~~~dinTpeDl~~l~~  193 (197)
T 2wee_A          163 HSGRH------PVRELAVDGCVPLDVDTWDDYRRLLE  193 (197)
T ss_dssp             HCTTS------CEEEEECSSCCCCCCSSHHHHHHHHT
T ss_pred             HHCCC------CEEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf             84868------77997489881658998999999984


No 6  
>1w77_A 2C-methyl-D-erythritol 4-phosphate cytidylyltransferase; plantherbicide, non-mevalonate pathway, isoprenoid; HET: C5P; 2.00A {Arabidopsis thaliana} SCOP: c.68.1.13
Probab=99.92  E-value=2.1e-24  Score=158.40  Aligned_cols=190  Identities=18%  Similarity=0.188  Sum_probs=112.0

Q ss_pred             CEEEEECCCCCCCCCC--CCCCEEECCEEHHHHHHHHHHHCCC-CEEEEECC-HHHHHHHHHCC---CEEECCCCCHHHH
Q ss_conf             9178864887535666--9760266784379899999972687-20787252-13344431010---0000234412367
Q T0593             1 MKVAVLVGGVGRRIGM--EKTEVMLCGKKLIEWVLEKYSPFQT-VFVCRDEK-QAEKLSSRYEA---EFIWDLHKGVGSI   73 (208)
Q Consensus         1 m~~vIlAaG~gtRlg~--pK~ll~i~Gkpli~~~i~~l~~~~~-~~~iv~~~-~~~~~~~~~~~---~~~~~~~~~~~~~   73 (208)
                      +.+||||||+|||||+  ||+|++++|||||+|+++++..... ..++++.+ +..+.......   .......++....
T Consensus         5 i~~IIlAaG~g~Rm~~~~pK~l~~l~gkpli~~~i~~~~~~~~~~~iiVv~~~~~~~~~~~~~~~~~~~~~~~~~g~~r~   84 (228)
T 1w77_A            5 VSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGKERQ   84 (228)
T ss_dssp             EEEEEECCC-------CCCTTTSEETTEEHHHHHHHHHHTCTTEEEEEEECCGGGTHHHHTTTTSCSSEEEEECCCSSHH
T ss_pred             EEEEEECCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH
T ss_conf             59999688147458869995152789748999999999861654413402407766665301222222222234342134


Q ss_pred             HHHHHHHHH----CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEE-CCCCEE--------------------CCHH
Q ss_conf             788887750----497899827887688899999999985079879997-389232--------------------0221
Q T0593            74 AGIHAALRH----FGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIP-KHDYPE--------------------PLLA  128 (208)
Q Consensus        74 ~~~~~~~~~----~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~-~~~~~~--------------------~~~~  128 (208)
                      .++.+++..    .+.++++.+|+||++++.+..+++.....+..+++. ..+...                    ..+.
T Consensus        85 ~sv~~~l~~~~~~~~~v~i~~~~~p~~~~~~i~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  164 (228)
T 1w77_A           85 DSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQ  164 (228)
T ss_dssp             HHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHHSEEEEEEECCSCCCCBCTTSCBC------CCEEEEEEE
T ss_pred             HHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEECCCCHHHHHHHHHH
T ss_conf             88877776532332333024321235607777665554430365213567666457761687412235420013343333


Q ss_pred             HCCHHHHHH-HHHHHHHCCHHHHHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             000678999-9999871205789999752612321450144228644203698989999999999971
Q T0593           129 YYAESAADE-LERAILQGIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKM  195 (208)
Q Consensus       129 ~~~~~~~~~-i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~  195 (208)
                      .+....+.. +..... ....   +++...........+..+..+ ...++|||||||++||+++++.
T Consensus       165 ~f~~~~L~~~~~~~~~-~~~~---~tD~~~l~~~~g~~v~~i~~~-~~nikI~t~eDL~~Ae~lL~~~  227 (228)
T 1w77_A          165 VIKPELLKKGFELVKS-EGLE---VTDDVSIVEYLKHPVYVSQGS-YTNIKVTTPDDLLLAERILSED  227 (228)
T ss_dssp             EECHHHHHHHHHHHHH-SCCC---CCC-CCTTGGGSSCCEEEECC-TTCCCCCSHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHH-CCCC---CCCHHHHHHHCCCCEEEEECC-HHHCCCCCHHHHHHHHHHHHHC
T ss_conf             4536899999999885-3998---675999999779955999679-5535889999999999998504


No 7  
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.91  E-value=2e-24  Score=158.54  Aligned_cols=183  Identities=21%  Similarity=0.271  Sum_probs=109.2

Q ss_pred             CE--EEEECCCCCCCCCC-CCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf             91--78864887535666-9760266784379899999972687207872521334443101000002344123677888
Q T0593             1 MK--VAVLVGGVGRRIGM-EKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIH   77 (208)
Q Consensus         1 m~--~vIlAaG~gtRlg~-pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (208)
                      |+  |||||||+|||||+ ||+|++++|+|||+|+++++.+...+ +|++....+.. ......   ...++.....++.
T Consensus        24 Mki~aIILAaG~GtRm~~~pK~l~~i~Gkpli~~~l~~~~~~~~i-ivv~~~~~~~~-~~~~~~---~v~GG~tR~~SV~   98 (236)
T 2px7_A           24 MEVSVLIPAAGNGLRLGRGPKAFLQVGGRTLLEWTLAAFRDAAEV-LVALPPGAEPP-KGLGAV---FLEGGATRQASVA   98 (236)
T ss_dssp             CCCEEEEECCC-------CCGGGCBCSSSBHHHHHHHHTTTCSEE-EEEECTTCCCC-TTCSCE---EEECCSSHHHHHH
T ss_pred             CCEEEEEECCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHCCCCE-EEEEECCCCCC-CCCCEE---ECCCCEEEEHHHH
T ss_conf             827999987824564896985670899877999999986458946-99981343222-122114---4258722223387


Q ss_pred             HHHHHCCC--EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE-ECCCCEE-------------------CCHHHCCHHHH
Q ss_conf             87750497--89982788768889999999998507987999-7389232-------------------02210006789
Q T0593            78 AALRHFGS--CVVAAIDMPFVKPEVLEHLYKEGEKAGCDALI-PKHDYPE-------------------PLLAYYAESAA  135 (208)
Q Consensus        78 ~~~~~~~~--~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v-~~~~~~~-------------------~~~~~~~~~~~  135 (208)
                      .+++..+.  +++..+|+||++++++.++++.....+..+.+ +..+.+.                   -.+..+..+.+
T Consensus        99 ~aL~~~~~~~Vli~d~arP~i~~~~i~~li~~~~~~~~~~~~~~~~dti~~~~~~~~~~~~~r~~~~~~qtpq~f~~~~L  178 (236)
T 2px7_A           99 RLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSGAAVPVLPVPDTLMAPEGEAYGRVVPREAFRLVQTPQGFFTALL  178 (236)
T ss_dssp             HHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHSEEEEEEECCSEEEEECSSSCEEEECGGGCEEECSCEEEEHHHH
T ss_pred             HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCEEEEEECCEEEEEHHHHHHHHHHH
T ss_conf             66641155514520252214979999999877634780464044453289985250566640320246301345149999


Q ss_pred             H-HHHHHHHHCCHHHH---HHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             9-99999871205789---9997526123214501442286442036989899999999999715
Q T0593           136 D-ELERAILQGIRKIL---VPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKMS  196 (208)
Q Consensus       136 ~-~i~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~~  196 (208)
                      . ........+. .+.   .+.+..      ..++..+..+.. .+.|+|||||+.||.|++-++
T Consensus       179 ~~a~~~~~~~~~-~~TDd~~l~~~~------g~kV~~v~g~~~-NiKITt~eDL~~Ae~llk~~~  235 (236)
T 2px7_A          179 REAHAYARRKGL-EASDDAQLVQAL------GYPVALVEGEAT-AFKITHPQDLVLAEALARVWS  235 (236)
T ss_dssp             HHHHHHHHHHTC-CCSSHHHHHHHT------TCCCEEEECCTT-CCCCCSHHHHHHHHHHHTC--
T ss_pred             HHHHHHHHHCCC-CCCCHHHHHHHC------CCCEEEEEECHH-CCCCCCHHHHHHHHHHHHHHC
T ss_conf             999999886599-977199999976------997799973800-078289999999999998652


No 8  
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.91  E-value=3.8e-25  Score=162.62  Aligned_cols=191  Identities=12%  Similarity=0.091  Sum_probs=106.8

Q ss_pred             EEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHH---HHHHHCCCEEE-C---CCCCHHHHHH
Q ss_conf             788648875356669760266784379899999972687207872521334---44310100000-2---3441236778
Q T0593             3 VAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEK---LSSRYEAEFIW-D---LHKGVGSIAG   75 (208)
Q Consensus         3 ~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~---~~~~~~~~~~~-~---~~~~~~~~~~   75 (208)
                      |||||||.||||+. |||++++|||||+|+++++...+....|++..+.+.   ........... .   .........+
T Consensus         7 aiIlA~g~s~Rl~~-K~L~~i~GkpLI~~~i~~l~~~~~~~~IvV~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (228)
T 1ezi_A            7 AVILARQNSKGLPL-KNLRKMNGISLLGHTINAAISSKCFDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISG   85 (228)
T ss_dssp             EEEECCSSCSSSTT-TTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHTTCEEEECCC------CHHHHH
T ss_pred             EEEECCCCCCCCCC-CCEEEECCEEHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
T ss_conf             99964877998999-25578799798999999997389977899747729999999971982566422326998418999


Q ss_pred             HHHHHH----HCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECC---CC-----EECC----HHHCCHHHHHHHH
Q ss_conf             888775----049789982788768889999999998507987999738---92-----3202----2100067899999
Q T0593            76 IHAALR----HFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKH---DY-----PEPL----LAYYAESAADELE  139 (208)
Q Consensus        76 ~~~~~~----~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~~~---~~-----~~~~----~~~~~~~~~~~i~  139 (208)
                      +...+.    ..+.++++.+|+||++++.++++++.+.+.+.+.++...   ..     ....    ............+
T Consensus        86 ~~~~~~~~~~~~~~vlil~~D~p~~~~~~l~~~i~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  165 (228)
T 1ezi_A           86 VIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSDLEQPR  165 (228)
T ss_dssp             HHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSSCTTSCEEECC--CEEESSCHHHHTCCG
T ss_pred             HHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEECCCHHHH
T ss_conf             99999963666898999659856104889999998533478858999865326886159998399889999713532678


Q ss_pred             HHHH------HCCHHH-HHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             9987------120578-99997526123214501442286442036989899999999999715
Q T0593           140 RAIL------QGIRKI-LVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKMS  196 (208)
Q Consensus       140 ~~~~------~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~~  196 (208)
                      ....      .+.+.. ...+.....  .....+..+..+...|+||||||||++||++++.++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~dIdt~eDl~~Ae~il~~~~  227 (228)
T 1ezi_A          166 QQLPQAFRPNGAIYINDTASLIANNC--FFIAPTKLYIMSHQDSIDIDTELDLQQAENILNHKE  227 (228)
T ss_dssp             GGSCCEEEEEEEEEEEEHHHHHHHTS--SCCSSCEEEECCTGGGCCCCSHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHCCC
T ss_conf             77257789863367624999985220--037976999848865469999999999999996618


No 9  
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TM1393, structural genomics, JCSG, joint center for structural genomics, PSI; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.91  E-value=1.2e-23  Score=153.98  Aligned_cols=185  Identities=17%  Similarity=0.235  Sum_probs=105.5

Q ss_pred             CE-EEEECCCCCCCCCC--CCCCEEECCEEHHHHHHHHHHHCCC-CEEEEECC-HHHHHHHHHC--CCEEECCCCCHHHH
Q ss_conf             91-78864887535666--9760266784379899999972687-20787252-1334443101--00000234412367
Q T0593             1 MK-VAVLVGGVGRRIGM--EKTEVMLCGKKLIEWVLEKYSPFQT-VFVCRDEK-QAEKLSSRYE--AEFIWDLHKGVGSI   73 (208)
Q Consensus         1 m~-~vIlAaG~gtRlg~--pK~ll~i~Gkpli~~~i~~l~~~~~-~~~iv~~~-~~~~~~~~~~--~~~~~~~~~~~~~~   73 (208)
                      |+ |||||||+|||||+  ||+|++++|+|||+|+++++.+... ..++++.+ +.........  ........++....
T Consensus        13 M~IAIILAaG~gtRm~~~~pK~l~~i~gkplI~~~i~~~~~~~~i~~IiVv~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   92 (234)
T 1vpa_A           13 MNVAILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVFHEKVLGIVEGGDTRS   92 (234)
T ss_dssp             CEEEEEEECCCCGGGCCSSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCCCTTEEEEEECCSSHH
T ss_pred             CCEEEECCCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCC
T ss_conf             70899946877623897998437078999989999999996878452232235111000000023444431123455432


Q ss_pred             HHHHHHH----H-HCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEE-CCCCE--------EC----------CHHH
Q ss_conf             7888877----5-0497899827887688899999999985079879997-38923--------20----------2210
Q T0593            74 AGIHAAL----R-HFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIP-KHDYP--------EP----------LLAY  129 (208)
Q Consensus        74 ~~~~~~~----~-~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~-~~~~~--------~~----------~~~~  129 (208)
                      .++..++    . ..+.++++.+|+||+++++++++++.......++.+. ..+..        ..          ....
T Consensus        93 ~s~~~~l~~~~~~~~~~v~i~~~d~P~i~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (234)
T 1vpa_A           93 QSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGAATLALKNSDALVRVENDRIEYIPRKGVYRILTPQA  172 (234)
T ss_dssp             HHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSEEEEEEECCSEEEEEETTEEEEECCTTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHH
T ss_conf             00789999997349973899852334551778877765301122122344344326750676035214056652322344


Q ss_pred             CCHHHHHHHHHHHHHCCHHHH---HHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             006789999999871205789---9997526123214501442286442036989899999999999715
Q T0593           130 YAESAADELERAILQGIRKIL---VPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKMS  196 (208)
Q Consensus       130 ~~~~~~~~i~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~~  196 (208)
                      +..   ..+......+. .+.   ..+...      ..++..+..+.. .++|||||||+.||.+++++.
T Consensus       173 ~~~---~~l~~~~~~~~-~~tD~~~~~~~~------g~kv~~i~g~~~-nikItt~eDL~~Ae~llk~~~  231 (234)
T 1vpa_A          173 FSY---EILKKAHENGG-EWADDTEPVQKL------GVKIALVEGDPL-CFKVTFKEDLELARIIAREWE  231 (234)
T ss_dssp             EEH---HHHHHHHTTCC-CCSSSHHHHHTT------TCCCEEEECCGG-GCCCCSTTHHHHHHHHHHHHC
T ss_pred             HHH---HHHHHHHHHCC-CCCCHHHHHHHC------CCCEEEEECCHH-HCCCCCHHHHHHHHHHHHHHC
T ss_conf             417---88888897478-867489999976------995699966855-348899999999999998643


No 10 
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str}
Probab=99.90  E-value=6.3e-23  Score=149.87  Aligned_cols=196  Identities=17%  Similarity=0.165  Sum_probs=106.4

Q ss_pred             EEEEECCCCCCCCCC---CCCCEEECCEEHHHHHHHHHHHCCC-CEEEEECC-HHHHH----HHHHCCCE-EECCCCCHH
Q ss_conf             178864887535666---9760266784379899999972687-20787252-13344----43101000-002344123
Q T0593             2 KVAVLVGGVGRRIGM---EKTEVMLCGKKLIEWVLEKYSPFQT-VFVCRDEK-QAEKL----SSRYEAEF-IWDLHKGVG   71 (208)
Q Consensus         2 ~~vIlAaG~gtRlg~---pK~ll~i~Gkpli~~~i~~l~~~~~-~~~iv~~~-~~~~~----~~~~~~~~-~~~~~~~~~   71 (208)
                      .|||||||+|||||+   ||+|++++|||||+|+++++..... ..++++.+ .....    ........ ......+..
T Consensus         5 ~aiIlAaG~gtR~~s~~~PK~l~~i~gkplI~~~i~~~~~s~~~~~IiVv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   84 (246)
T 3f1c_A            5 YAQILAGGKGTRMGNVSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISDDRIVVIEGGED   84 (246)
T ss_dssp             EEEEECC-----C-CSSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCCTTEEEEECCSS
T ss_pred             EEEEECCCCCCCCCCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             99996586541499969680304788944999999999718986756302427789888765543035652354125542


Q ss_pred             ----HHHHHHHHHH-----HCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEE-CCCCEECC---------------
Q ss_conf             ----6778888775-----0497899827887688899999999985079879997-38923202---------------
Q T0593            72 ----SIAGIHAALR-----HFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIP-KHDYPEPL---------------  126 (208)
Q Consensus        72 ----~~~~~~~~~~-----~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~-~~~~~~~~---------------  126 (208)
                          ...++.....     ..+.++++.+|+||++++.++.+++.+...+..+++. ........               
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~P~i~~~~I~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  164 (246)
T 3f1c_A           85 RNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDTVIEALDTIVESSNHEVITDIPVRDHM  164 (246)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEEEEECSSCEEECSSSSBCCBCCCGGGE
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCEEEEEEECCHHH
T ss_conf             01008779999987532688864899845666788899999999999679769999555631313222045543131145


Q ss_pred             -----HHHCCH-HHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             -----210006-78999999987120578999975261232145014422864420369898999999999997155773
Q T0593           127 -----LAYYAE-SAADELERAILQGIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKMSTEGL  200 (208)
Q Consensus       127 -----~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~~~~~~  200 (208)
                           +..+.. .+...+......+...+.+.   ..........+..+..+.. -++|||||||+.||++++++..+..
T Consensus       165 ~~~~tP~~f~~~~l~~~~~~~~~~~~~~~tD~---~~~~~~~~~~i~~i~~~~~-n~kItt~eDl~~Ae~ll~~r~~~~~  240 (246)
T 3f1c_A          165 YQGQTPQSFNMKKVFNHYQNLTPEKKQILTDA---CKICLLAGDDVKLVKGEIF-NIKITTPYDLKVANAIIQERIANEG  240 (246)
T ss_dssp             EEEEEEEEEEHHHHHHHHHTSCHHHHHHCCCH---HHHHHHTTCCCEEEECCTT-CCCCCSHHHHHHHHHHHHHHC----
T ss_pred             HHHCCCHHCCHHHHHHHHHHHHHHCCCCCCHH---HHHHHHCCCCEEEEECCHH-HCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             54407311169999999999887089774289---9999987997699977877-6489999999999999998888369


Q ss_pred             C
Q ss_conf             0
Q T0593           201 L  201 (208)
Q Consensus       201 ~  201 (208)
                      .
T Consensus       241 ~  241 (246)
T 3f1c_A          241 H  241 (246)
T ss_dssp             -
T ss_pred             C
T ss_conf             9


No 11 
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP), isoprenoid biosynthesys; HET: CTP; 1.50A {Escherichia coli K12} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 1h3m_A
Probab=99.89  E-value=8.3e-23  Score=149.20  Aligned_cols=192  Identities=17%  Similarity=0.172  Sum_probs=109.8

Q ss_pred             EEEEECCCCCCCCCC--CCCCEEECCEEHHHHHHHHHHHCCCC-EEEEECCHHHHHHH---HHCCCEEECCCCCHHHHHH
Q ss_conf             178864887535666--97602667843798999999726872-07872521334443---1010000023441236778
Q T0593             2 KVAVLVGGVGRRIGM--EKTEVMLCGKKLIEWVLEKYSPFQTV-FVCRDEKQAEKLSS---RYEAEFIWDLHKGVGSIAG   75 (208)
Q Consensus         2 ~~vIlAaG~gtRlg~--pK~ll~i~Gkpli~~~i~~l~~~~~~-~~iv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   75 (208)
                      .|||||||+||||++  ||+|++|+|+|||+|+++++...... .++++.........   ...........++.....+
T Consensus         9 ~aIILAAG~GtRm~s~~PK~l~~i~gkpli~~~i~~~~~~~~~~~IvVv~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s   88 (236)
T 1i52_A            9 CAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADS   88 (236)
T ss_dssp             EEEEEECCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGGSGGGGCTTEEEEECCSSHHHH
T ss_pred             EEEEECCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEECCCCCCCHHH
T ss_conf             89996880571189899842618898889999999986367866599731701444323201234321111578740389


Q ss_pred             HHHHHHH---CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE--EECCCCEEC---------------------CHHH
Q ss_conf             8887750---4978998278876888999999999850798799--973892320---------------------2210
Q T0593            76 IHAALRH---FGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDAL--IPKHDYPEP---------------------LLAY  129 (208)
Q Consensus        76 ~~~~~~~---~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~--v~~~~~~~~---------------------~~~~  129 (208)
                      +..++..   .+.+++..+|.||++.+.+..++.........+.  .+..+....                     .+..
T Consensus        89 ~~~a~~~~~~~~~Vli~d~~~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~r~~~~~~~tp~~  168 (236)
T 1i52_A           89 VLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQF  168 (236)
T ss_dssp             HHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCEEEEEECCSCEEEECTTSSSEEEEECCTTCEEEEEEEE
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHEEECCCHHH
T ss_conf             99998605787379842677877758999999999863376406898630240300257764322234123145265256


Q ss_pred             CCHHH-HHHHHHHHHHCCHHHHHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             00678-9999999871205789999752612321450144228644203698989999999999971557
Q T0593           130 YAESA-ADELERAILQGIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKMSTE  198 (208)
Q Consensus       130 ~~~~~-~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~~~~  198 (208)
                      +.... ...+.....++ +.+.+...   .......++..+..+ ...++|||||||+.||.++++...+
T Consensus       169 f~~~~L~~~~~~~~~~~-~~~TD~~~---l~~~~g~kv~~i~~~-~~n~kItt~eDL~~ae~~l~~~i~~  233 (236)
T 1i52_A          169 FPRELLHDCLTRALNEG-ATITDEAS---ALEYCGFHPQLVEGR-ADNIKVTRPEDLALAEFYLTRTIHQ  233 (236)
T ss_dssp             EEHHHHHHHHHHHHHTT-CCCCSHHH---HHHHTTCCCEEEECC-TTCCCCCSHHHHHHHHHHHCC----
T ss_pred             HHHHHHHHHHHHHHHCC-CCCCCHHH---HHHHCCCCEEEEECC-HHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             23999999999998519-99772999---999769965999658-5643899999999999998754112


No 12 
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.89  E-value=6.4e-23  Score=149.84  Aligned_cols=185  Identities=16%  Similarity=0.147  Sum_probs=101.6

Q ss_pred             EEEECCCCCCCCC--CCCCCEEECCEEHHHHHHHHHHHCCCCEEE-EECCHHH---HHHHHHCCCEEECCCCCHH----H
Q ss_conf             7886488753566--697602667843798999999726872078-7252133---4443101000002344123----6
Q T0593             3 VAVLVGGVGRRIG--MEKTEVMLCGKKLIEWVLEKYSPFQTVFVC-RDEKQAE---KLSSRYEAEFIWDLHKGVG----S   72 (208)
Q Consensus         3 ~vIlAaG~gtRlg--~pK~ll~i~Gkpli~~~i~~l~~~~~~~~i-v~~~~~~---~~~~~~~~~~~~~~~~~~~----~   72 (208)
                      |||||||.|||||  .||+|++++|||||+|+++++...+....+ ++.....   ................+..    .
T Consensus         9 AIILAaG~g~Rm~s~~pK~l~~l~gkpli~~~i~~~~~~~~~~~iiVv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~   88 (231)
T 1vgw_A            9 ALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETV   88 (231)
T ss_dssp             EEEECC----------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHHHHHHCTTSEEECCCCSSHHHHH
T ss_pred             EEEECCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf             99976987522897998037179987699999999986253232102215022111331100232111024675036667


Q ss_pred             HHHHHHHHH-----HCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE--EECCCC--------EECC------HHHCC
Q ss_conf             778888775-----04978998278876888999999999850798799--973892--------3202------21000
Q T0593            73 IAGIHAALR-----HFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDAL--IPKHDY--------PEPL------LAYYA  131 (208)
Q Consensus        73 ~~~~~~~~~-----~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~--v~~~~~--------~~~~------~~~~~  131 (208)
                      ..++.....     ..+.++++.+|+||++++.+..+++.....+.+++  ++..+.        +...      .....
T Consensus        89 ~~~l~~l~~~~~~~~~d~v~i~~~~~P~i~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~r~~~~~~~t  168 (231)
T 1vgw_A           89 RNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQT  168 (231)
T ss_dssp             HHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCEEEEEECCSCEEEESSSBEEEEECCTTEEEEEE
T ss_pred             HHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCEEEECCCEEEECCCHHHHHHHHH
T ss_conf             67999998741145554034304443568889998888753111111111123343214522884763156688999886


Q ss_pred             HHH--HHHHHHHHH-HCCHHHH---HHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf             678--999999987-1205789---99975261232145014422864420369898999999999997
Q T0593           132 ESA--ADELERAIL-QGIRKIL---VPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSK  194 (208)
Q Consensus       132 ~~~--~~~i~~~~~-~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~  194 (208)
                      +++  ...+...+. .+.+.+.   .+...      ....+..+..+.. -++|||||||+.||.+|+.
T Consensus       169 p~~f~~~~l~~~~~~~~~~~~tD~~~l~~~------~g~~v~~v~~~~~-nikIttpeDl~~ae~lL~~  230 (231)
T 1vgw_A          169 PQLFQAGLLHRALAAENLGGITDEASAVEK------LGVRPLLIQGDAR-NLKLTQPQDAYIVRLLLDA  230 (231)
T ss_dssp             EEEEEHHHHHHHHHC----CCCSHHHHHHT------TTCCCEEEECCTT-CCCCCSHHHHHHHHHHCC-
T ss_pred             HHCCHHHHHHHHHHHHHCCCCCCHHHHHHH------CCCCEEEEECCHH-HCCCCCHHHHHHHHHHHHC
T ss_conf             220006889998888614899818999998------7997599977800-0680899999999999853


No 13 
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.88  E-value=1.2e-23  Score=153.99  Aligned_cols=189  Identities=14%  Similarity=0.100  Sum_probs=108.5

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHH----HHHCCCEEECC-CCCH
Q ss_conf             917886488753566-----6976026678437989999997268720787252133444----31010000023-4412
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLS----SRYEAEFIWDL-HKGV   70 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~----~~~~~~~~~~~-~~~~   70 (208)
                      |+|||||||.||||+     .||||++|+|||||+|+++++...+...++++.++..+..    ..+...+.... ....
T Consensus        26 mkaiIlAaG~GtRm~~~t~~~PK~Ll~I~gkpli~~~i~~l~~~gi~~Iiiv~g~~~e~i~~~~~~~~i~ii~~~~~~~~  105 (254)
T 1jyk_A           26 VKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEKYGVRLVFNDKYADY  105 (254)
T ss_dssp             CEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHHHCCEEEECTTTTTS
T ss_pred             CCEEEECCCCCCCCCCHHCCCCEEEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             23899898676568721069880253899858999999999985998899933543211222223468532222122022


Q ss_pred             HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE-------------EEECCCCE------------EC
Q ss_conf             367788887750497899827887688899999999985079879-------------99738923------------20
Q T0593            71 GSIAGIHAALRHFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDA-------------LIPKHDYP------------EP  125 (208)
Q Consensus        71 ~~~~~~~~~~~~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~-------------~v~~~~~~------------~~  125 (208)
                      +..+++..+.+..+..+++.+|+.+........+     ......             .+...+.+            ..
T Consensus       106 gt~~sl~~a~~~i~~~~vi~~dd~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  180 (254)
T 1jyk_A          106 NNFYSLYLVKEELANSYVIDADNYLFKNMFRNDL-----TRSTYFSVYREDCTNEWFLVYGDDYKVQDIIVDSKAGRILS  180 (254)
T ss_dssp             CTHHHHHTTGGGCTTEEEEETTEEESSCCCCSCC-----CSEEEEECEESSCSSCCEEEECTTCBEEEEECCCSSEEBCC
T ss_pred             CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH-----HHCCCCEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCEE
T ss_conf             3323322103343012223453234368999999-----72865346513887775179868985577786477777146


Q ss_pred             CHHHCCHHHHHHHHHHHHHC----CHHHHHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             22100067899999998712----05789999752612321450144228644203698989999999999971
Q T0593           126 LLAYYAESAADELERAILQG----IRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKM  195 (208)
Q Consensus       126 ~~~~~~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~  195 (208)
                      ...++.......+...+.+.    ... ..+++..-...+....+.+.......|++|||||||++|+++++..
T Consensus       181 Gi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~~~~~~~~~~Idt~edl~~~~~~~kn~  253 (254)
T 1jyk_A          181 GVSFWDAPTAEKIVSFIDKAYVSGEFV-DLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEILKNE  253 (254)
T ss_dssp             SEEEECHHHHHHHHHHHHHHHTTTCCT-TCCTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHHHHHHHHC--
T ss_pred             EEEEECHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHCCEEEEEECCCCEEECCCHHHHHHHHHHHHCC
T ss_conf             789986699999999988865134420-2689999999997479069995698578069999999999997268


No 14 
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.90A {Thermus thermophilus HB8} SCOP: c.68.1.19
Probab=99.86  E-value=6.7e-21  Score=138.27  Aligned_cols=110  Identities=26%  Similarity=0.350  Sum_probs=85.8

Q ss_pred             EEEEECCCCCC---CCCC-CCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf             17886488753---5666-9760266784379899999972687207872521334443101000002344123677888
Q T0593             2 KVAVLVGGVGR---RIGM-EKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIH   77 (208)
Q Consensus         2 ~~vIlAaG~gt---Rlg~-pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (208)
                      .|||||||+|+   |||. ||+|++++|||||+|+++++...+...++++.++.....      .........+...++.
T Consensus         4 ~avIlAaG~~~~~~r~g~~~K~L~~i~Gkpli~~~l~~l~~~~~~~ivvv~~~~~~~~------~~~~~~~~~~~~~~~~   77 (232)
T 2dpw_A            4 SAIVLAGGKEAWAERFGVGSKALVPYRGRPMVEWVLEALYAAGLSPVYVGENPGLVPA------PALTLPDRGGLLENLE   77 (232)
T ss_dssp             EEEEECCCBCSGGGTTTCSBGGGSEETTEETHHHHHHHHHHTTCEEEEESCCSSCSSC------CSEEECCCSSHHHHHH
T ss_pred             EEEEECCCCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCCEE------EEECCCCCHHHHHHHH
T ss_conf             5999899899888899998910169999849999999998789988999907843314------5320232138899999


Q ss_pred             HHHHHC-CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             877504-9789982788768889999999998507987999
Q T0593            78 AALRHF-GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALI  117 (208)
Q Consensus        78 ~~~~~~-~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v  117 (208)
                      .+++.. +.++++.+|+||+++++++++++.+.+.+..+.+
T Consensus        78 ~al~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~v  118 (232)
T 2dpw_A           78 QALEHVEGRVLVATGDIPHLTEEAVRFVLDKAPEAALVYPI  118 (232)
T ss_dssp             HHHHTCCSEEEEEETTCTTCCHHHHHHHHHHCCSCSEEEEE
T ss_pred             HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf             99874258659996887756999999999961005723699


No 15 
>3hl3_A Glucose-1-phosphate thymidylyltransferase; IDP01254, sucrose, structural genomics, center for structural genomics of infectious diseases; HET: SUC; 2.76A {Bacillus anthracis}
Probab=99.85  E-value=5.5e-21  Score=138.76  Aligned_cols=189  Identities=14%  Similarity=0.033  Sum_probs=105.9

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------CC-CEEECC
Q ss_conf             917886488753566-----6976026678437989999997268720787252133444310--------10-000023
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRY--------EA-EFIWDL   66 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~--------~~-~~~~~~   66 (208)
                      |+|||||||+||||+     .||||++|+|+|||+|+++++...+...++++.+.........        .. ......
T Consensus        25 MkaIIlAaG~GtRl~plt~~~PK~ll~i~gkpli~~~l~~l~~~gi~~iiiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (269)
T 3hl3_A           25 MKGIILAGGTGSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGSGQEFGVSFTYRVQ  104 (269)
T ss_dssp             EEEEEECCSCCGGGTTTTTTSCGGGSEETTEEHHHHHHHHHHTTTCCEEEEEEETTTHHHHHHHHTTSGGGTCEEEEEEE
T ss_pred             CEEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCCCCEEEEEEC
T ss_conf             64999898662468843579984077999998899999999864995042001233311011110123467846999641


Q ss_pred             CCCHHHHHHHHHHHHHC--CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE---EC------------CCC-------
Q ss_conf             44123677888877504--9789982788768889999999998507987999---73------------892-------
Q T0593            67 HKGVGSIAGIHAALRHF--GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALI---PK------------HDY-------  122 (208)
Q Consensus        67 ~~~~~~~~~~~~~~~~~--~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v---~~------------~~~-------  122 (208)
                      ....+...++..+.+..  +..+++.+|..+.. +. ..+++.+.+.....++   +.            .++       
T Consensus       105 ~~~~G~~~sl~~~~~~i~~~~~lli~~dd~~~~-~~-~~~l~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~V~~i~eK  182 (269)
T 3hl3_A          105 DKAGGIAQALGLCEDFVGNDRMVVILGDNIFSD-DI-RPYVEEFTNQKEGAKVLLQSVDDPERFGVANIQNRKIIEIEEK  182 (269)
T ss_dssp             CSSCCHHHHHHTTHHHHTTSEEEEEETTEEESS-CS-HHHHHHHHTSSSSEEEEEEECSCGGGSEEEEEETTEEEEEEES
T ss_pred             CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHH-HH-HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCEEEEEEEC
T ss_conf             456758999999999738997489905742004-56-9999999867899789877417831153279519969999989


Q ss_pred             --------EECCHHHCCHHHHHHHHHHHH--HCCHHHHHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHH
Q ss_conf             --------320221000678999999987--1205789999752612321450144228644203698989999999999
Q T0593           123 --------PEPLLAYYAESAADELERAIL--QGIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEIC  192 (208)
Q Consensus       123 --------~~~~~~~~~~~~~~~i~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il  192 (208)
                              ......++++.....+.....  .+.+.+.+++..+    +....+..+... ..|+|||||+||.+|+.++
T Consensus       183 p~~~~~~~~~~Gi~~f~~~~~~~l~~~~~~~~~e~~~~d~~~~l----i~~~~i~~~~~~-g~W~DigTp~dl~~An~~~  257 (269)
T 3hl3_A          183 PKEPKSSYAVTGIYLYDSKVFSYIKELKPSARGELEITDINNWY----LKRGVLTYNEMS-GWWTDAGTHVSLQRANALA  257 (269)
T ss_dssp             CSSCSCSEEEEEEEEECTHHHHHHHTSCSTHHHHCCHHHHHHHH----HHTTCEEEEECS-SCEEECCSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH----HHCCCEEEEEEC-CEEEECCCHHHHHHHHHHH
T ss_conf             99988885995721027589999986499867743277899999----975997999869-9899198999999997997


Q ss_pred             HHHC
Q ss_conf             9715
Q T0593           193 SKMS  196 (208)
Q Consensus       193 ~~~~  196 (208)
                      ++.+
T Consensus       258 ~~~~  261 (269)
T 3hl3_A          258 RDIN  261 (269)
T ss_dssp             TTCC
T ss_pred             HHHH
T ss_conf             6275


No 16 
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.85  E-value=2.6e-21  Score=140.66  Aligned_cols=183  Identities=15%  Similarity=0.158  Sum_probs=111.5

Q ss_pred             CEEEEECCCCCCCCCC--CCCCEEECCEEHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf             9178864887535666--97602667843798999999726872-07872521334443101000002344123677888
Q T0593             1 MKVAVLVGGVGRRIGM--EKTEVMLCGKKLIEWVLEKYSPFQTV-FVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIH   77 (208)
Q Consensus         1 m~~vIlAaG~gtRlg~--pK~ll~i~Gkpli~~~i~~l~~~~~~-~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (208)
                      +.+||||||.|+|||+  ||++++++|+|||+|+++++...... .+|++..+.... ...... .....++.....|+.
T Consensus         4 is~IILAAG~GsRmg~~~pKq~~~l~gkpli~~~l~~~~~~~~~~~IVVv~~~~~~~-~~~~k~-~~iv~GG~tR~~SV~   81 (371)
T 1w55_A            4 MSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSSNITYM-KKFTKN-YEFIEGGDTRAESLK   81 (371)
T ss_dssp             EEEEEECCSCCTTTCSSSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEESCHHHH-HTTCSS-SEEEECCSSHHHHHH
T ss_pred             EEEEEECCEEEEECCCCCCHHHEEECCEEHHHHHHHHHHCCCCCCEEEEECCCHHHH-HHCCCC-EEEECCCCCCCEEEE
T ss_conf             279996883001179399479804478998999999996489989999989978999-860788-089479975023566


Q ss_pred             HHHHHCC--CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE-EECCCCEEC---------CHHHCCHHHH--HHHHHHHH
Q ss_conf             8775049--78998278876888999999999850798799-973892320---------2210006789--99999987
Q T0593            78 AALRHFG--SCVVAAIDMPFVKPEVLEHLYKEGEKAGCDAL-IPKHDYPEP---------LLAYYAESAA--DELERAIL  143 (208)
Q Consensus        78 ~~~~~~~--~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~-v~~~~~~~~---------~~~~~~~~~~--~~i~~~~~  143 (208)
                      .+++..+  .++++.+|+||++++.++++++.+...++.+. ++..+....         .+...++|.+  ..+.....
T Consensus        82 ~gL~~i~~d~VlIHDaaRPfis~~lI~~li~~~~~~~avip~l~v~Dti~~~~~~~dR~~l~~~QTPQ~F~~~~l~~a~~  161 (371)
T 1w55_A           82 KALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKADCITPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKALD  161 (371)
T ss_dssp             HHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGGCSEEEEEECCCSCEEETTEEECGGGCCEECSCEEEEHHHHHHHTS
T ss_pred             ECHHHHHCCCEEEECCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             12343300311783262676424522333211223333456555443322134334540114542424555788875432


Q ss_pred             HCCHHHHHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHH
Q ss_conf             12057899997526123214501442286442036989899999999
Q T0593           144 QGIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEE  190 (208)
Q Consensus       144 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~  190 (208)
                      ++..    +++...........+..+..+.. .+.|+|||||+.++.
T Consensus       162 ~~~~----~TDdasl~e~~g~~V~~v~G~~~-N~KIT~~eDL~~~~~  203 (371)
T 1w55_A          162 QNLE----FTDDSTAIAAMGGKIWFVEGEEN-ARKLTFKEDLKKLDL  203 (371)
T ss_dssp             SCCC----CSSHHHHHHTTTCCEEEEECCGG-GCCCCSGGGGGGSCC
T ss_pred             HHCC----CCCCHHHHHHCCCCCEECCCHHH-CEEECCCCHHHHCCC
T ss_conf             1013----45634678864985131769222-404175401110012


No 17 
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.83  E-value=9.9e-20  Score=131.54  Aligned_cols=47  Identities=21%  Similarity=0.351  Sum_probs=40.1

Q ss_pred             CEEEEECCCCCCCCCC---CCCCEEECCEEHHHHHHHHHHHCCCCEEEEE
Q ss_conf             9178864887535666---9760266784379899999972687207872
Q T0593             1 MKVAVLVGGVGRRIGM---EKTEVMLCGKKLIEWVLEKYSPFQTVFVCRD   47 (208)
Q Consensus         1 m~~vIlAaG~gtRlg~---pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~   47 (208)
                      |.|||||||+|||||+   ||||++|+|||||+|+++++.+.+....|++
T Consensus         3 ~~aiIlAaG~GsRm~~~~~PK~L~~i~GkPlI~~~i~~~~~~~~~~~Iiv   52 (236)
T 2vsh_A            3 IYAGILAGGTGTRMGISNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVV   52 (236)
T ss_dssp             EEEEEEEC-----------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEE
T ss_pred             EEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             39999057666459999969017278983099999999984899776985


No 18 
>3juk_A UDP-glucose pyrophosphorylase (GALU); transferase; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.83  E-value=1.8e-19  Score=130.02  Aligned_cols=195  Identities=11%  Similarity=0.002  Sum_probs=110.2

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC--------------
Q ss_conf             917886488753566-----6976026678437989999997268720787252133444310100--------------
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAE--------------   61 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~--------------   61 (208)
                      +||||||||+||||+     .||||+||+|||||+|+++++.+.+...++++.++...........              
T Consensus         3 ~kavILAaG~GtRl~plT~~~pK~Ll~i~gkpli~~~i~~l~~~gi~~iiiv~~~~~~~i~~~~~~~~~~~~~i~~~~~~   82 (281)
T 3juk_A            3 KKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKE   82 (281)
T ss_dssp             CEEEEECCSCCGGGTTGGGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CCHH
T ss_pred             CEEEEECCCCCCCCCHHHCCCCCCCCEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCCCEEECCCCCC
T ss_conf             26999898686668833369984244899987999999999986997999988787531033331433210001377740


Q ss_pred             --------------E-EECCCCCHHHHHHHHHHHHH--CCCEEEEECCCCCCCHHH----HHHHHHHHHCCCCEEEEECC
Q ss_conf             --------------0-00234412367788887750--497899827887688899----99999998507987999738
Q T0593            62 --------------F-IWDLHKGVGSIAGIHAALRH--FGSCVVAAIDMPFVKPEV----LEHLYKEGEKAGCDALIPKH  120 (208)
Q Consensus        62 --------------~-~~~~~~~~~~~~~~~~~~~~--~~~~lv~~~D~p~~~~~~----i~~l~~~~~~~~~~~~v~~~  120 (208)
                                    + ........+...++..+.+.  .++++++.+|.-+...+.    ..............+.....
T Consensus        83 ~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~a~~~i~~e~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (281)
T 3juk_A           83 NALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEV  162 (281)
T ss_dssp             HHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             HHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             22455540255412799751467868999999998739997599944745643743555566776655223443014654


Q ss_pred             -------------------------------------CCEECCHHHCCHHHHHHHHHHH--HHCCHHHHHHHHHCCEEEE
Q ss_conf             -------------------------------------9232022100067899999998--7120578999975261232
Q T0593           121 -------------------------------------DYPEPLLAYYAESAADELERAI--LQGIRKILVPLERLNVVYY  161 (208)
Q Consensus       121 -------------------------------------~~~~~~~~~~~~~~~~~i~~~~--~~g~~~~~~~~~~~~~~~~  161 (208)
                                                           ........++.+..+..+...-  ..+++.+..++..+    +
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~eKp~~~~~~s~~~~~g~~if~~~i~~~~~~~~~~~~~e~~l~d~~~~l----~  238 (281)
T 3juk_A          163 ALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQ----A  238 (281)
T ss_dssp             CTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTCSCSEEEEEEEEECTTHHHHHHTCCCCGGGSCCHHHHHHHH----H
T ss_pred             ECCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCEEEECEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHH----H
T ss_conf             303564466002432048834563467558887886528996507878799989985799889823278999999----8


Q ss_pred             CCCCEEEECCCHHHCCCCCCHHHHHHH-HHHHHHHCCCCC
Q ss_conf             145014422864420369898999999-999997155773
Q T0593           162 PVEKLRKFDKELISFFNINTPDDLKRA-EEICSKMSTEGL  200 (208)
Q Consensus       162 ~~~~~~~~~~~~~~~~~IdtpeDl~~a-~~il~~~~~~~~  200 (208)
                      ...++.++.... .|+||+||+||.+| ..+++++.-|..
T Consensus       239 ~~~~v~~~~~~g-~W~DiGtp~~l~~A~~~~~~~~~~~~~  277 (281)
T 3juk_A          239 KRKRIIAYQFKG-KRYDCGSVEGYIEASNAYYKKRLLEHH  277 (281)
T ss_dssp             HHSCCEEEECCS-EEEETTSHHHHHHHHHHHHHHHC----
T ss_pred             HCCCEEEEEECC-EEEECCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             569969999586-899897999999999999998654221


No 19 
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.83  E-value=1.1e-20  Score=137.08  Aligned_cols=191  Identities=14%  Similarity=0.103  Sum_probs=113.3

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECC-HHHHHHHHH-------CCCEEECCC
Q ss_conf             917886488753566-----6976026678437989999997268720787252-133444310-------100000234
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEK-QAEKLSSRY-------EAEFIWDLH   67 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~-~~~~~~~~~-------~~~~~~~~~   67 (208)
                      |+|||||||.||||.     .||||+|++|||||+|+++.+...+...++++.+ .........       ...+....+
T Consensus         4 MkaiIlagG~GtRl~p~t~~~pK~llpv~~kp~i~~~l~~l~~~gi~~i~iv~~~~~~~~~~~~~~dg~~~gi~i~y~~Q   83 (296)
T 1mc3_A            4 MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQ   83 (296)
T ss_dssp             CEEEEECCCCCGGGHHHHTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTCEEEEEEC
T ss_pred             CEEEEECCCCCCCCCHHHCCCCCCCCEECCEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHHCCEEEEEEC
T ss_conf             57999899786667631369995355899996799999999987998899992634289999996641762936999878


Q ss_pred             C-CHHHHHHHHHHHHHC--CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE---ECCC-------------C------
Q ss_conf             4-123677888877504--9789982788768889999999998507987999---7389-------------2------
Q T0593            68 K-GVGSIAGIHAALRHF--GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALI---PKHD-------------Y------  122 (208)
Q Consensus        68 ~-~~~~~~~~~~~~~~~--~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v---~~~~-------------~------  122 (208)
                      + ..|...++..+....  +..+++.+|..|...+ +..+++.+.+...++++   +..+             .      
T Consensus        84 ~~p~Gta~Ai~~a~~~i~~~~~~lilgddif~~~~-l~~~l~~~~~~~~~~tI~~~~v~dp~~yGVie~d~~g~i~~i~E  162 (296)
T 1mc3_A           84 PSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQG-FSPKLRHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEE  162 (296)
T ss_dssp             SSCCCSTHHHHHTHHHHTTSCEEEEETTEEEECSS-CHHHHHHHTTCCSSEEEEEEECSCCSSSBBCEEETTEEEEECCB
T ss_pred             CCCCCHHHHHHHHHHHCCCCCEEEEECCEEEECCC-HHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEE
T ss_conf             99996799999999981999759999996888887-79999999828898799999889962675689889996878898


Q ss_pred             ---------EECCHHHCCHHHHHHHHHHH--HHCCHHHHHHHHHCCEEEECCCCEEE-ECCCHHHCCCCCCHHHHHHHHH
Q ss_conf             ---------32022100067899999998--71205789999752612321450144-2286442036989899999999
Q T0593           123 ---------PEPLLAYYAESAADELERAI--LQGIRKILVPLERLNVVYYPVEKLRK-FDKELISFFNINTPDDLKRAEE  190 (208)
Q Consensus       123 ---------~~~~~~~~~~~~~~~i~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~IdtpeDl~~a~~  190 (208)
                               ......++.+..++.+....  ..|+..+.++....    +......+ .......|+|++|++||..|..
T Consensus       163 KP~~p~Snla~~GiY~f~~~v~~~~~~~k~s~rgE~eItD~~~~~----i~~~~~~~~~~~~~~~w~D~Gt~~~l~~a~~  238 (296)
T 1mc3_A          163 KPKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMY----LEAGNLTVELLGRGFAWLDTGTHDSLIEAST  238 (296)
T ss_dssp             SCSSCSCSEEEEEEEECCTHHHHHHHSCCCCSSSSCCHHHHHHHH----HHTTCEEEEECCTTCEEEECCSHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHH----HHCCCCEEEEECCCCEEECCCCHHHHHHHHH
T ss_conf             999998985998999988289999985899889963717899999----9859935999548977974899899999999


Q ss_pred             HHHHHC
Q ss_conf             999715
Q T0593           191 ICSKMS  196 (208)
Q Consensus       191 il~~~~  196 (208)
                      +++...
T Consensus       239 ~i~~~e  244 (296)
T 1mc3_A          239 FVQTVE  244 (296)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999999


No 20 
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold, structural genomics, PSI; HET: TYD; 1.70A {Methanothermobacterthermautotrophicus} SCOP: c.68.1.6
Probab=99.82  E-value=5.8e-20  Score=132.87  Aligned_cols=192  Identities=16%  Similarity=0.125  Sum_probs=111.3

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHH-HHHHHHH-------CCCEE-ECC
Q ss_conf             917886488753566-----697602667843798999999726872078725213-3444310-------10000-023
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQA-EKLSSRY-------EAEFI-WDL   66 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~-~~~~~~~-------~~~~~-~~~   66 (208)
                      |+|||||||+||||.     .||||+|++|+|||+|+++++...+...++++.++. .......       ...+. ...
T Consensus         4 MkaiILAgG~GtRl~plt~~~PK~ll~i~~k~~i~~~l~~l~~~g~~~i~iv~~~~~~~~~~~~l~~~~~~~~~i~~i~e   83 (295)
T 1lvw_A            4 MKGIVLAGGSGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDGSQFGVRFSYRVQ   83 (295)
T ss_dssp             CEEEEECCCCCSTTTTTTTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTSEEEEEEC
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCHHHHCCCEEEEEEC
T ss_conf             68999899784537721179887112699988999999999877998699994634499999984701340974899979


Q ss_pred             CCCHHHHHHHHHHHHHC--CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE---ECC-----CCE--------E----
Q ss_conf             44123677888877504--9789982788768889999999998507987999---738-----923--------2----
Q T0593            67 HKGVGSIAGIHAALRHF--GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALI---PKH-----DYP--------E----  124 (208)
Q Consensus        67 ~~~~~~~~~~~~~~~~~--~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v---~~~-----~~~--------~----  124 (208)
                      ....+...++..+....  +..+++.+|..+.... +..+++.+.....++++   ...     |++        .    
T Consensus        84 ~~~~gT~~ai~~a~~~l~~~~~~li~~dd~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~p~~yG~i~~~~~~~I~~f~E  162 (295)
T 1lvw_A           84 EEPRGIADAFIVGKDFIGDSKVALVLGDNVFYGHR-FSEILRRAASLEDGAVIFGYYVRDPRPFGVVEFDSEGRVISIEE  162 (295)
T ss_dssp             SSCCCGGGHHHHTHHHHTTSCEEEEETTCCEECTT-HHHHHHHHHTCCSSEEEEEEECSCCTTSEEEEECTTSBEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHCCCCCEEEEECCCEEECCH-HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEC
T ss_conf             99999799999999971999889998994651612-68999999856798699999888875665899889996888674


Q ss_pred             -----------CCHHHCCHHHHHHHHHHH--HHCCHHHHHHHHHCCEEEECCCC-EEEECCCHHHCCCCCCHHHHHHHHH
Q ss_conf             -----------022100067899999998--71205789999752612321450-1442286442036989899999999
Q T0593           125 -----------PLLAYYAESAADELERAI--LQGIRKILVPLERLNVVYYPVEK-LRKFDKELISFFNINTPDDLKRAEE  190 (208)
Q Consensus       125 -----------~~~~~~~~~~~~~i~~~~--~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~IdtpeDl~~a~~  190 (208)
                                 ....++....+..+....  ..+.+.+.......    ..... ..........|+|++||+||..+..
T Consensus       163 Kp~~~~s~~~~~Giy~~~~~if~~~~~~~~~~~~e~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dig~~~~l~~~s~  238 (295)
T 1lvw_A          163 KPSRPKSNYVVPGLYFYDNQVVEIARRIEPSDRGELEITSVNEEY----LRMGKLRVELMGRGMAWLDTGTHDGLLEASS  238 (295)
T ss_dssp             SCSSCSCSEECCSEEEECTTHHHHHHHCCCCTTSCCCHHHHHHHH----HHTTCEEEEEECTTCEECCCSSHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCEEECCCHHHH----HHHCCCCEEECCCCCEEECCCCHHHHHHHHH
T ss_conf             777875541773349998589999986698878970505306999----9858872798389975756998566888899


Q ss_pred             HHHHHCC
Q ss_conf             9997155
Q T0593           191 ICSKMST  197 (208)
Q Consensus       191 il~~~~~  197 (208)
                      .++.+..
T Consensus       239 ~i~~~~k  245 (295)
T 1lvw_A          239 FIETIQK  245 (295)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
T ss_conf             9999986


No 21 
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.82  E-value=5.8e-20  Score=132.87  Aligned_cols=193  Identities=11%  Similarity=0.049  Sum_probs=105.8

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC----------------
Q ss_conf             917886488753566-----69760266784379899999972687207872521334443101----------------
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYE----------------   59 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~----------------   59 (208)
                      ++|||||||+||||.     .||||+||+|+|||+|+++.+.+.+...++++.++.........                
T Consensus        15 ~kaIIlAaG~GtRL~plT~~~PK~Llpv~gkpli~~~i~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~   94 (297)
T 2ux8_A           15 RKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAARGKS   94 (297)
T ss_dssp             CEEEEEECCCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHTTTCC
T ss_pred             CEEEEECCCCCCCCCCHHCCCCCCCCEECCEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             78999899687668700069983224799998999999999986998899990125045555542224443221000466


Q ss_pred             -----------CCE-EECCCCCHHHHHHHHHHHHHC--CCEEEEECCCCCCCHH-HHHHHHHHHHCCCCEEEEEC-----
Q ss_conf             -----------000-002344123677888877504--9789982788768889-99999999850798799973-----
Q T0593            60 -----------AEF-IWDLHKGVGSIAGIHAALRHF--GSCVVAAIDMPFVKPE-VLEHLYKEGEKAGCDALIPK-----  119 (208)
Q Consensus        60 -----------~~~-~~~~~~~~~~~~~~~~~~~~~--~~~lv~~~D~p~~~~~-~i~~l~~~~~~~~~~~~v~~-----  119 (208)
                                 ..+ ........+...++..+.+..  ++++++.+|..+.... .+..........+.......     
T Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~Gta~al~~~~~~l~~~~~~vi~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  174 (297)
T 2ux8_A           95 LDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGGNLICAEEVPDD  174 (297)
T ss_dssp             GGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCSEEEEEC-----
T ss_pred             HHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf             66640134578628999813656367899999997399988999889524422046678899886328861689980345


Q ss_pred             ---------CC------------------------CEECCHHHCCHHHHHHHHHHHH--HCCHHHHHHHHHCCEEEECCC
Q ss_conf             ---------89------------------------2320221000678999999987--120578999975261232145
Q T0593           120 ---------HD------------------------YPEPLLAYYAESAADELERAIL--QGIRKILVPLERLNVVYYPVE  164 (208)
Q Consensus       120 ---------~~------------------------~~~~~~~~~~~~~~~~i~~~~~--~g~~~~~~~~~~~~~~~~~~~  164 (208)
                               .+                        .......++.+..+..+.....  .++..+.+++..+    +...
T Consensus       175 ~~~~~~~~~~~~~~~~~~~i~~~~~k~~~~~~~s~~~~~G~y~~~~~~~~~i~~~~~~~~~E~~l~d~l~~l----i~~~  250 (297)
T 2ux8_A          175 QTHRYGIITPGTQDGVLTEVKGLVEKPAPGTAPSNLSVIGRYILQPEVMRILENQGKGAGGEIQLTDAMQRM----IGDQ  250 (297)
T ss_dssp             ------CCCCCCBCSSEEEC--------------CCCEEEEEEECTHHHHHHHHTC--------CCTTGGGG----TTTS
T ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHH----HHCC
T ss_conf             676636998731278503677544404666677541354578507899988974599878853278999999----8579


Q ss_pred             CEEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             0144228644203698989999999999971557
Q T0593           165 KLRKFDKELISFFNINTPDDLKRAEEICSKMSTE  198 (208)
Q Consensus       165 ~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~~~~  198 (208)
                      ++..+... ..|+||+|||||.+|...+....++
T Consensus       251 ~v~~~~~~-g~W~DvGt~e~~~~An~~~~~~~~~  283 (297)
T 2ux8_A          251 PFHGVTFQ-GTRYDCGDKAGFIQANLAVALSRPD  283 (297)
T ss_dssp             CEEEEECS-SEEEETTSHHHHHHHHHHHHHHCTT
T ss_pred             CEEEEEEC-CEEEECCCHHHHHHHHHHHHHCCCH
T ss_conf             96999958-5899898989999999999865933


No 22 
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.81  E-value=1.3e-19  Score=130.96  Aligned_cols=55  Identities=22%  Similarity=0.245  Sum_probs=48.5

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHH
Q ss_conf             917886488753566-----6976026678437989999997268720787252133444
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLS   55 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~   55 (208)
                      +||||||||+||||+     .||||+||+|||||+|+++.+...+...++++.++.....
T Consensus         3 ~KAiILAAG~GsRl~plT~~~PK~Ll~v~gkplI~~~i~~l~~~gi~~i~iv~gy~~~~i   62 (259)
T 1tzf_A            3 SKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVI   62 (259)
T ss_dssp             CEEEEEECSCC--------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTHHHH
T ss_pred             CCEEEECCCCCCCCCHHHCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEECCCHHHHHH
T ss_conf             508998887754678344699800128999999999999999839974400200107899


No 23 
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.81  E-value=1.1e-18  Score=125.54  Aligned_cols=186  Identities=14%  Similarity=0.045  Sum_probs=106.2

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCC---------------
Q ss_conf             917886488753566-----697602667843798999999726872078725213344431010---------------
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEA---------------   60 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~---------------   60 (208)
                      |||||||||+||||.     .||||+||+|||||+|+++.+...+...++++.++..........               
T Consensus        13 ~kaIIlAaG~GTRl~PlT~~~PK~Llpv~gkpli~~~i~~l~~~Gi~~I~iV~~~~~~~i~~~~~~~~~~~~~~~~~~~~   92 (323)
T 2pa4_A           13 KTVVVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMERGKT   92 (323)
T ss_dssp             CEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHTTCH
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHCCCCC
T ss_conf             57999898277668810079883201899999999999999985997899991165001220110330222222103432


Q ss_pred             --------------CEEECCCCCHHHHHHHHHHHHHCC---CEE-EEECCCCCCCHHHHHHHHHHHHCCCCEEEE-EC--
Q ss_conf             --------------000023441236778888775049---789-982788768889999999998507987999-73--
Q T0593            61 --------------EFIWDLHKGVGSIAGIHAALRHFG---SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI-PK--  119 (208)
Q Consensus        61 --------------~~~~~~~~~~~~~~~~~~~~~~~~---~~l-v~~~D~p~~~~~~i~~l~~~~~~~~~~~~v-~~--  119 (208)
                                    ..........+...++..+.....   ..+ ....+......................... ..  
T Consensus        93 ~~~~~~~~~~~~~~~~~~~q~~~~g~~~av~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (323)
T 2pa4_A           93 DQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGGSVLCAVEVS  172 (323)
T ss_dssp             HHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCSEEEEEEECC
T ss_pred             CCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             22000002356413899972787871689998665406743211112465300000000678887640331111000022


Q ss_pred             -------------CC------------------------CEECCHHHCCHHHHHHHHHHH--HHCCHHHHHHHHHCCEEE
Q ss_conf             -------------89------------------------232022100067899999998--712057899997526123
Q T0593           120 -------------HD------------------------YPEPLLAYYAESAADELERAI--LQGIRKILVPLERLNVVY  160 (208)
Q Consensus       120 -------------~~------------------------~~~~~~~~~~~~~~~~i~~~~--~~g~~~~~~~~~~~~~~~  160 (208)
                                   .+                        ........+.+..++.+....  ..+++.+.++...+-   
T Consensus       173 ~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~y~~~~~i~~~l~~~~~~~~~E~~ltd~i~~li---  249 (323)
T 2pa4_A          173 EADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDAPSRLAATGRYLLDRKIFDALRRITPGAGGELQLTDAIDLLI---  249 (323)
T ss_dssp             GGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTCSCSEEEEEEEEEETHHHHHHHHCCCCGGGCCCHHHHHHHHH---
T ss_pred             CCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEHHHHHHHHH---
T ss_conf             23441222898326421243278752021157656764424888883578999999848999998667999999999---


Q ss_pred             ECCCCEEEECCCHHHCCCCCCHHHHHHHHH
Q ss_conf             214501442286442036989899999999
Q T0593           161 YPVEKLRKFDKELISFFNINTPDDLKRAEE  190 (208)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~  190 (208)
                      -....+.++..+ ..|+||+||+||.+|.-
T Consensus       250 ~~g~~V~~~~~~-g~W~DiGtp~~y~~A~~  278 (323)
T 2pa4_A          250 DEGHPVHIVIHQ-GKRHDLGNPGGYIPACV  278 (323)
T ss_dssp             HTTCCEEEEECC-SEEEECSSHHHHHHHHH
T ss_pred             HCCCCEEEEEEC-CEEEECCCHHHHHHHHH
T ss_conf             879987999958-68998999899999999


No 24 
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.77  E-value=2.9e-18  Score=123.12  Aligned_cols=184  Identities=12%  Similarity=0.061  Sum_probs=102.9

Q ss_pred             EEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCC----------------
Q ss_conf             17886488753566-----697602667843798999999726872078725213344431010----------------
Q T0593             2 KVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEA----------------   60 (208)
Q Consensus         2 ~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~----------------   60 (208)
                      ||||||||.||||.     .||||+||+|||||+|+++.+...+...++++.++..........                
T Consensus        10 kaIIlAaG~GtRl~plT~~~PKpLlpi~gkpll~~~i~~l~~~Gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   89 (302)
T 2e3d_A           10 KAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQ   89 (302)
T ss_dssp             EEEEECCSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC----CH
T ss_pred             EEEEECCCCCCCCCHHHCCCCCCCCEECCEEHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             79998997876677222699843308999889999999999869978999840321455653024530244555422220


Q ss_pred             -------------CEEECCCCC-HHHHHHHHHHHHH--CCCEEEEECCCCCC------CHHHHHHHHHHHHCCCCEEEE-
Q ss_conf             -------------000023441-2367788887750--49789982788768------889999999998507987999-
Q T0593            61 -------------EFIWDLHKG-VGSIAGIHAALRH--FGSCVVAAIDMPFV------KPEVLEHLYKEGEKAGCDALI-  117 (208)
Q Consensus        61 -------------~~~~~~~~~-~~~~~~~~~~~~~--~~~~lv~~~D~p~~------~~~~i~~l~~~~~~~~~~~~v-  117 (208)
                                   .+....... .+...++..+...  .+..+++.+|..+.      .......+++.+......++. 
T Consensus        90 ~~~~~~~~~~~~~~i~~~~~~~~~g~g~ai~~~~~~i~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (302)
T 2e3d_A           90 LLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIMV  169 (302)
T ss_dssp             HHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCCEEEEE
T ss_pred             HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf             04554203567707999867899767999998888719986389941534641565214544999999987404442035


Q ss_pred             -EC-----------C--------------------------CCEECCHHHCCHHHHHHHHHHH--HHCCHHHHHHHHHCC
Q ss_conf             -73-----------8--------------------------9232022100067899999998--712057899997526
Q T0593           118 -PK-----------H--------------------------DYPEPLLAYYAESAADELERAI--LQGIRKILVPLERLN  157 (208)
Q Consensus       118 -~~-----------~--------------------------~~~~~~~~~~~~~~~~~i~~~~--~~g~~~~~~~~~~~~  157 (208)
                       +.           .                          +.......++++..+..+....  ..+...+..++..+ 
T Consensus       170 ~~~~~~~~yG~v~~d~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~G~y~~~~~~l~~~~~~~~~~~~~~~~~d~~~~l-  248 (302)
T 2e3d_A          170 EPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDML-  248 (302)
T ss_dssp             EECSCGGGSEEEECTTCCCCTTCEEEECEEEESCCTTTCSCSEEEEEEEEECTTHHHHHTCCCC----CCCHHHHHHHH-
T ss_pred             EEEECCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCCEECHHHHHHHH-
T ss_conf             8752252256786147543212210203301225688998557997668743799999973799989812087999999-


Q ss_pred             EEEECCCCEEEECCCHHHCCCCCCHHHHHHHHH
Q ss_conf             123214501442286442036989899999999
Q T0593           158 VVYYPVEKLRKFDKELISFFNINTPDDLKRAEE  190 (208)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~  190 (208)
                         ....++..+... ..|+||+|||||.+|..
T Consensus       249 ---~~~~~v~~~~~~-g~w~DiGtpe~y~~A~~  277 (302)
T 2e3d_A          249 ---IEKETVEAYHMK-GKSHDCGNKLGYMQAFV  277 (302)
T ss_dssp             ---HHHSCEEEEECC-SCEEECSSHHHHHHHHH
T ss_pred             ---HHCCCEEEEEEC-CEEEECCCHHHHHHHHH
T ss_conf             ---856997999967-78998989899999999


No 25 
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 1mp5_A* 1mp3_A* 1mp4_A*
Probab=99.76  E-value=2.5e-18  Score=123.47  Aligned_cols=193  Identities=13%  Similarity=0.067  Sum_probs=103.8

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHHH-------CCCEEECC-
Q ss_conf             917886488753566-----697602667843798999999726872078725-2133444310-------10000023-
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDE-KQAEKLSSRY-------EAEFIWDL-   66 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~-~~~~~~~~~~-------~~~~~~~~-   66 (208)
                      ++|||||||.||||.     .||||++++|+|||+|+++++...+...++++. .+........       ...+.... 
T Consensus         3 ~kavILAgG~GtRl~plt~~~PK~ll~i~gk~li~~~l~~l~~~gi~~i~iv~~~~~~~~i~~~~~~~~~~~~~i~~~~e   82 (293)
T 1fxo_A            3 RKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNWGLDLQYAVQ   82 (293)
T ss_dssp             EEEEEECCCCCTTTTTHHHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTCEEEEEEC
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             13999888677778831279982011899823999999999977998799994666099999998663326975887016


Q ss_pred             CCCHHHHHHHHHHHHHCC--CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE---ECC-----CCE-------------
Q ss_conf             441236778888775049--789982788768889999999998507987999---738-----923-------------
Q T0593            67 HKGVGSIAGIHAALRHFG--SCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALI---PKH-----DYP-------------  123 (208)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~--~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v---~~~-----~~~-------------  123 (208)
                      ....+...++..+....+  ..+++..+. ......+..++..+.+....+++   +..     |++             
T Consensus        83 ~~~~gt~~Ai~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~yG~i~~~~~~~i~~~~~  161 (293)
T 1fxo_A           83 PSPDGLAQAFLIGESFIGNDLSALVLGDN-LYYGHDFHELLGSASQRQTGASVFAYHVLDPERYGVVEFDQGGKAISLEE  161 (293)
T ss_dssp             SSCCCGGGHHHHTHHHHTTSEEEEEETTE-EEECTTHHHHHHHHHTCCSSEEEEEEECSCGGGSEEEEECTTSCEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCEEEECC-CHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHCCCEECCCCCEEEEEEC
T ss_conf             88887248999998874146620233011-00126779999999956998599999899826559710057872787312


Q ss_pred             ----------ECCHHHCCHHHHHHHHHHHH--HCCHHHHHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHH
Q ss_conf             ----------20221000678999999987--120578999975261232145014422864420369898999999999
Q T0593           124 ----------EPLLAYYAESAADELERAIL--QGIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEI  191 (208)
Q Consensus       124 ----------~~~~~~~~~~~~~~i~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~i  191 (208)
                                .....++....+..+.....  .+...+........   ...............|+|++||+||..++..
T Consensus       162 k~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  238 (293)
T 1fxo_A          162 KPLEPKSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAYL---ERGQLSVEIMGRGYAWLDTGTHDSLLEAGQF  238 (293)
T ss_dssp             SCSSCSSSEEEEEEEEECTTHHHHHHHCCCCTTSSCCHHHHHHHHH---HTTCEEEEECCTTSEEEECCSHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCEECCCHHHHHH---HHCCCCEEEECCCCEECCCCCHHHHHHHHHH
T ss_conf             5667666769988799848999999967978789436003899999---8499717884589701068789999999999


Q ss_pred             HHHHCC
Q ss_conf             997155
Q T0593           192 CSKMST  197 (208)
Q Consensus       192 l~~~~~  197 (208)
                      ++.+..
T Consensus       239 ~~~~e~  244 (293)
T 1fxo_A          239 IATLEN  244 (293)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999998


No 26 
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.75  E-value=4.3e-18  Score=122.11  Aligned_cols=188  Identities=12%  Similarity=0.081  Sum_probs=98.5

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHH-HHHHHHCCCEEECCCCC-HHHH
Q ss_conf             917886488753566-----6976026678437989999997268720787252133-44431010000023441-2367
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAE-KLSSRYEAEFIWDLHKG-VGSI   73 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~-~~~~~~~~~~~~~~~~~-~~~~   73 (208)
                      |+|||||||+||||.     .||||+||+|+|||+|+++.++..+...++++..+.. ................. ....
T Consensus         1 MkAVILAaG~GtRl~PlT~~~PK~LLPv~n~PlI~y~L~~L~~~Gi~ei~vv~~~~~~~~i~~~~~~i~~~~~~~~~~~~   80 (401)
T 2ggo_A            1 MKAFILAAGSGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSKNKEYFEKKLKEISIVTQKDDIKGT   80 (401)
T ss_dssp             CEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHCTTCEEEECCTTCCBS
T ss_pred             CEEEEECCCCCCCCCCCCCCCCHHHCEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCH
T ss_conf             96999888677677732489871433899812999999999987998899996887299999865984799943678753


Q ss_pred             HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECC-------------CCE---------------EC
Q ss_conf             78888775049789982788768889999999998507987999738-------------923---------------20
Q T0593            74 AGIHAALRHFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKH-------------DYP---------------EP  125 (208)
Q Consensus        74 ~~~~~~~~~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~~~-------------~~~---------------~~  125 (208)
                      ..........+..+++.+|.++.........  .........++...             .++               ..
T Consensus        81 ~~~~~~~~~~d~~~~v~~d~~~~~~~~~~~~--~~~~~~~i~~~~~~~p~~~g~~~~~~~~~v~~~~e~~~~~~s~~~~~  158 (401)
T 2ggo_A           81 GAAILSAKFNDEALIIYGDLFFSNEKEICNI--ITLKENAIIGVKVSNPKDYGVLVLDNQNNLSKIIEKPEIPPSNLINA  158 (401)
T ss_dssp             TTTGGGCCCSSEEEEEETTEEESCSHHHHHH--TTCSSEEEEEEECSCCSSSCEEEECTTSSEEEEECSCSSCSCSEEEE
T ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCHHHHHH--HHHHHCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCEEE
T ss_conf             3432243048966996055211460777766--65310658999801775584899779725999998588996552147


Q ss_pred             CHHHCCHHHHHHHHHHHHH--CCHHHHHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             2210006789999999871--205789999752612321450144228644203698989999999999971
Q T0593           126 LLAYYAESAADELERAILQ--GIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKM  195 (208)
Q Consensus       126 ~~~~~~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~  195 (208)
                      .........+..+......  +......+....    ........+ .....|+|++||+||..+...+.+.
T Consensus       159 giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~di~~~~~~~~~~~~~l~~  225 (401)
T 2ggo_A          159 GIYKLNSDIFTYLDKISISERGELELTDAINLM----AKDHRVKVI-EYEGYWMDIGKPWNIIDVNKWALDN  225 (401)
T ss_dssp             EEEEEETHHHHHHHHSCCCSSSCBCHHHHHHHH----HHHSCEEEE-ECCSCEEECCSHHHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHH----HHHCCEEEE-EECCEEEECCCCHHHHHHHHHHHHC
T ss_conf             765238478778986085757842355599998----730857999-9576541037733068899998733


No 27 
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.75  E-value=6.5e-17  Score=115.37  Aligned_cols=194  Identities=15%  Similarity=0.125  Sum_probs=108.7

Q ss_pred             EEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHH--HHHCCCEEECCCCCHHHHHHHHHH
Q ss_conf             178864887535666976026678437989999997268720787252133444--310100000234412367788887
Q T0593             2 KVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLS--SRYEAEFIWDLHKGVGSIAGIHAA   79 (208)
Q Consensus         2 ~~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   79 (208)
                      .+||+|+|.|||+.. |+|++++|+|||+|+++++...+...++|+++..+...  .......................+
T Consensus         4 ~~iIpAR~gSkRlp~-Knl~~i~GkpLI~~~I~~~~~s~id~IiVsTd~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (262)
T 1vic_A            4 TVIIPARFASSRLPG-KPLADIKGKPMIQHVFEKALQSGASRVIIATDNENVADVAKSFGAEVCMTSVNHNSGTERLAEV   82 (262)
T ss_dssp             EEEEECCCCCSSSTT-GGGCEETTEEHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEECCCSSCCHHHHHHHH
T ss_pred             EEEEECCCCCCCCCC-CHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHH
T ss_conf             999823878988997-1024509908999999999977989099981897520233311544212441048872477899


Q ss_pred             HH-----HCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEE---------------------CCCCEEC--------
Q ss_conf             75-----0497899827887688899999999985079879997---------------------3892320--------
Q T0593            80 LR-----HFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIP---------------------KHDYPEP--------  125 (208)
Q Consensus        80 ~~-----~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~---------------------~~~~~~~--------  125 (208)
                      ..     ..+.++.+.+|.|+.++.+++.+++............                     ..+....        
T Consensus        83 ~~~~~~~~~~~vi~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (262)
T 1vic_A           83 VEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPY  162 (262)
T ss_dssp             HHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSC
T ss_pred             HHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHCCCCCCEEEEECCCCCCHHHHCCCHHH
T ss_conf             99840467867999957201101222011344302212210123442056232147641145455777451110041222


Q ss_pred             ------------------------CHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCEE-E-ECCCCEEEECCCHHHCCCC
Q ss_conf             ------------------------2210006789999999871205789999752612-3-2145014422864420369
Q T0593           126 ------------------------LLAYYAESAADELERAILQGIRKILVPLERLNVV-Y-YPVEKLRKFDKELISFFNI  179 (208)
Q Consensus       126 ------------------------~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~I  179 (208)
                                              ....+.+..+..   +.....-.+ ...+.+... . ..+..+..+......+++|
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~l-e~~e~ie~~r~l~ng~~I~~~~~~~~~~~dI  238 (262)
T 1vic_A          163 DRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQ---YVQWAPTQL-ENLEKLEQLRVLYNGERIHVELAKEVPAVGV  238 (262)
T ss_dssp             CHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHH---HHHSCCCHH-HHHHTCTTHHHHHTTCCEEEEECSSCCCCCC
T ss_pred             HHHHHHHHCCHHHCCCCCCEEEEEEEEECCHHHHHH---HCCCCCCHH-HHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf             001101100012202443100230021100565443---302799846-7777399999998799367999179998699


Q ss_pred             CCHHHHHHHHHHHHHHCCCCC
Q ss_conf             898999999999997155773
Q T0593           180 NTPDDLKRAEEICSKMSTEGL  200 (208)
Q Consensus       180 dtpeDl~~a~~il~~~~~~~~  200 (208)
                      ||||||+.||.+|++..+...
T Consensus       239 Dt~eDl~~ae~ilk~n~~~~~  259 (262)
T 1vic_A          239 DTAEDLEKVRAILAANGSHHH  259 (262)
T ss_dssp             CSHHHHHHHHHHHHHTCC---
T ss_pred             CCHHHHHHHHHHHHHCCCCCC
T ss_conf             799999999999997799764


No 28 
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A*
Probab=99.74  E-value=2.2e-17  Score=118.11  Aligned_cols=116  Identities=19%  Similarity=0.216  Sum_probs=83.9

Q ss_pred             CEEEEECCCCCCCCC--CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCE--E-ECCCCCHHHHHH
Q ss_conf             917886488753566--69760266784379899999972687207872521334443101000--0-023441236778
Q T0593             1 MKVAVLVGGVGRRIG--MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEF--I-WDLHKGVGSIAG   75 (208)
Q Consensus         1 m~~vIlAaG~gtRlg--~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~   75 (208)
                      |+|||||||+||||.  .||||+||+|+|||+|+++.+.+.+...++++..+..+....+....  . .......+...+
T Consensus         6 l~AVILAgG~gtRl~p~~PK~LLPi~nkPlI~y~l~~L~~~g~~eI~iv~~~~~~~i~~~l~~~~i~~i~q~~~~GTada   85 (456)
T 2v0h_A            6 LSAVILAAGKGTRMYSDLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANEQVNWVLQTEQLGTAHA   85 (456)
T ss_dssp             EEEEEECCCCCGGGCSSSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTCCCEEEECSCCCCHHHH
T ss_pred             CEEEEECCCCCCCCCCCCCHHHEEECCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCHHHH
T ss_conf             57999788888768999986861899886999999999977999799990799899998726798499977887873999


Q ss_pred             HHHHHHH---CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             8887750---4978998278876888999999999850798799
Q T0593            76 IHAALRH---FGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDAL  116 (208)
Q Consensus        76 ~~~~~~~---~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~  116 (208)
                      +..+...   .+.++++.+|.++.....+..+++.+..++..+.
T Consensus        86 l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~~i~  129 (456)
T 2v0h_A           86 VQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPENGIALL  129 (456)
T ss_dssp             HHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCTTSEEEE
T ss_pred             HHHHHHHCCCCCCEEEECCCCEECCCHHHHHHHHHHHCCCCEEE
T ss_conf             99865521456753674387202140438999987651794799


No 29 
>3dk5_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann-like fold, LEFT-handed-beta-helix, trimer, cell shape; 2.23A {Mycobacterium tuberculosis} PDB: 3d8v_A 3d98_A* 3dj4_A 3foq_A 2qkx_A*
Probab=99.73  E-value=5.4e-17  Score=115.84  Aligned_cols=116  Identities=18%  Similarity=0.253  Sum_probs=84.9

Q ss_pred             EEEEECCCCCCCCC--CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------CCCEEECC-CCCH
Q ss_conf             17886488753566--6976026678437989999997268720787252133444310--------10000023-4412
Q T0593             2 KVAVLVGGVGRRIG--MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRY--------EAEFIWDL-HKGV   70 (208)
Q Consensus         2 ~~vIlAaG~gtRlg--~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~--------~~~~~~~~-~~~~   70 (208)
                      .+||||||+||||.  .||||+||+|+|||+|+++.+.+.+...++++..+..+....+        ...+.... ....
T Consensus         8 ~vVILAgG~GtRl~p~tPK~LlPiankPmI~y~L~~L~~aGi~eIiVv~~~~~e~I~~~i~~~~~~~~~~i~~v~q~~~l   87 (495)
T 3dk5_A            8 AVLVLAAGPGTRMRSDTPKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGRTIDVALQDRPL   87 (495)
T ss_dssp             EEEEEECSCCGGGCCSSCGGGCEETTEEHHHHHHHHHHHHCCSEEEEEESSCHHHHTTTTTTHHHHTTSCCEEEECSSCC
T ss_pred             EEEEECCCCCCCCCCCCCHHHCEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             69998675875689999778827898129999999998669987999958988999999987787629827999807989


Q ss_pred             HHHHHHHHHHHHC-----CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             3677888877504-----9789982788768889999999998507987999
Q T0593            71 GSIAGIHAALRHF-----GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALI  117 (208)
Q Consensus        71 ~~~~~~~~~~~~~-----~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v  117 (208)
                      +..+++..++...     +.++++.+|.++++.+.+..+++.+..++.++++
T Consensus        88 GTadAl~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~h~~~~~~~ti  139 (495)
T 3dk5_A           88 GTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTV  139 (495)
T ss_dssp             CHHHHHHHHHTTSCTTCCSEEEEEESSCTTCCHHHHHHHHHHHHHTTCSEEE
T ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf             7399999999861123456521112542323747899999987621551044


No 30 
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, cytoplasm, lipopolysaccharide biosynthesis, magnesium; HET: KDO CTP; 1.90A {Escherichia coli} PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.72  E-value=1.4e-16  Score=113.39  Aligned_cols=113  Identities=12%  Similarity=0.077  Sum_probs=76.7

Q ss_pred             EEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHH--HHHHHHCCCEEECCCCCHHHHHHHHHH
Q ss_conf             178864887535666976026678437989999997268720787252133--444310100000234412367788887
Q T0593             2 KVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAE--KLSSRYEAEFIWDLHKGVGSIAGIHAA   79 (208)
Q Consensus         2 ~~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (208)
                      -|||+|.|.|+|+.. |+|.+++|+|||+|++++++......++|+++..+  .........+.................
T Consensus        20 iaiIpAR~gSkRlp~-KnL~~i~GkpLI~~~i~~a~~s~i~~viVsTd~~~i~~~~~~~~~~~~~~~~~~~~~t~~~~~~   98 (264)
T 3k8d_A           20 VVIIPARYASTRLPG-KPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEV   98 (264)
T ss_dssp             EEEEECCSCCSSSTT-GGGCEETTEEHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEECCTTCCSHHHHHHHH
T ss_pred             EEEEECCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHEECCCEEEEECCCCCCCCHHHHHH
T ss_conf             999815877888998-4001228951999999999966999679851333211221002430123215335664788887


Q ss_pred             -----HHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf             -----750497899827887688899999999985079879
Q T0593            80 -----LRHFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDA  115 (208)
Q Consensus        80 -----~~~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~  115 (208)
                           ....+.++.+.+|.|+++++.++.+++.+.....+.
T Consensus        99 ~~~~~~~~~~~i~~~~~d~p~~~~~~i~~~i~~~~~~~~~~  139 (264)
T 3k8d_A           99 VEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGM  139 (264)
T ss_dssp             HHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSE
T ss_pred             HHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf             77623442100100202212211557777765404443333


No 31 
>1hv9_A UDP-N-acetylglucosamine pyrophosphorylase; LEFT-handed parallel beta-helix, transferase; HET: COA UD1; 2.10A {Escherichia coli} SCOP: b.81.1.4 c.68.1.5 PDB: 2oi5_A* 2oi6_A* 2oi7_A* 3fww_A 1fxj_A* 1fwy_A*
Probab=99.72  E-value=4.9e-17  Score=116.06  Aligned_cols=116  Identities=20%  Similarity=0.273  Sum_probs=81.5

Q ss_pred             CEEEEECCCCCCCCC--CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC--E-EECCCCCHHHHHH
Q ss_conf             917886488753566--6976026678437989999997268720787252133444310100--0-0023441236778
Q T0593             1 MKVAVLVGGVGRRIG--MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAE--F-IWDLHKGVGSIAG   75 (208)
Q Consensus         1 m~~vIlAaG~gtRlg--~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~   75 (208)
                      |+|||||||+||||.  .||||+||+|+|||+|+++.+.+.+...++++..+..+....+...  + ........+..++
T Consensus         6 ~~~VILa~G~GtRl~~~~PK~LlPv~n~PlI~y~l~~l~~~g~~eiivv~~~~~~~i~~~l~~~~i~~~~q~~~~GTada   85 (456)
T 1hv9_A            6 MSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHA   85 (456)
T ss_dssp             EEEEEEECSCCGGGCCSSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEECSCHHHHHHHCCCTTEEEEECSSCCCHHHH
T ss_pred             CEEEEECCCCCCCCCCCCCHHHEEECCEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCHHHH
T ss_conf             42899878787667999985751899723999999999977998599993899899999756699489987898981999


Q ss_pred             HHHHHHHC---CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             88877504---978998278876888999999999850798799
Q T0593            76 IHAALRHF---GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDAL  116 (208)
Q Consensus        76 ~~~~~~~~---~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~  116 (208)
                      +..+....   +.++++.+|..+........+..........++
T Consensus        86 l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (456)
T 1hv9_A           86 MQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKPQGGIGLL  129 (456)
T ss_dssp             HHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCTTSEEEE
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf             99998750334432100343222314567888876512333211


No 32 
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.69  E-value=8e-16  Score=109.11  Aligned_cols=113  Identities=12%  Similarity=0.111  Sum_probs=78.4

Q ss_pred             EEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHH---HHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf             1788648875356669760266784379899999972687207872521334---4431010000023441236778888
Q T0593             2 KVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEK---LSSRYEAEFIWDLHKGVGSIAGIHA   78 (208)
Q Consensus         2 ~~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      -+||+|.|.|+|+.. |+|.+++|+|||+|+++++..+.....|++.+....   ........+................
T Consensus         4 i~iIpAR~gSkRlp~-Knl~~i~GkpLi~~~i~~a~k~~~~d~Iivstd~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
T 1h7e_A            4 VIVIPARYGSSRLPG-KPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMTRNDHESGTDRLVE   82 (245)
T ss_dssp             EEEEECCSCCSSSTT-GGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESCHHHHHHHHHTTCEEEECCSCCSSHHHHHHH
T ss_pred             EEEECCCCCCCCCCC-CHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHH
T ss_conf             999737977877998-3133528963999999999967999979997566310013430596587468856675299999


Q ss_pred             HHHH--CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf             7750--497899827887688899999999985079879
Q T0593            79 ALRH--FGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDA  115 (208)
Q Consensus        79 ~~~~--~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~  115 (208)
                      +...  .+.++.+.+|+||+.++.++.++..+.......
T Consensus        83 ~~~~~~~d~ii~l~~~~P~~~~~~i~~~~~~~~~~~~~~  121 (245)
T 1h7e_A           83 VMHKVEADIYINLQGDEPMIRPRDVETLLQGMRDDPALP  121 (245)
T ss_dssp             HHHHSCCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCC
T ss_pred             HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCE
T ss_conf             998549988999478778899899999986443024422


No 33 
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.69  E-value=2e-16  Score=112.52  Aligned_cols=190  Identities=17%  Similarity=0.158  Sum_probs=105.4

Q ss_pred             CEEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHH---HHHHHHCCCEEECCC----CCHHHH
Q ss_conf             9178864887535666976026678437989999997268720787252133---444310100000234----412367
Q T0593             1 MKVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAE---KLSSRYEAEFIWDLH----KGVGSI   73 (208)
Q Consensus         1 m~~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~---~~~~~~~~~~~~~~~----~~~~~~   73 (208)
                      +.|||+|+|.|+|+.. |+|.+++|+|||+|+++++........|++.++..   .........+.....    ......
T Consensus         4 i~aiIpAR~~S~R~p~-K~l~~i~gkpLi~~~i~~~~k~~~~~~Iiv~tdd~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (229)
T 1qwj_A            4 LAALVLARGGSKGIPL-KNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDHDEIENVAKQFGAQVHRRSSETSKDSSTSL   82 (229)
T ss_dssp             EEEEEECCSCCSSSSC-TTTSEETTEEHHHHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTTCEEEECCGGGSSTTCCHH
T ss_pred             EEEEECCCCCCCCCCC-CCHHHHCCEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHH
T ss_conf             9999345877868998-262565880789999999996699887999635101002000158510245452247730122


Q ss_pred             HHHHHHHH---HCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEC---CCCEECC-----------HHH----C-C
Q ss_conf             78888775---04978998278876888999999999850798799973---8923202-----------210----0-0
Q T0593            74 AGIHAALR---HFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK---HDYPEPL-----------LAY----Y-A  131 (208)
Q Consensus        74 ~~~~~~~~---~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~~---~~~~~~~-----------~~~----~-~  131 (208)
                      ..+..+..   ..+.++.+.+|+||+.+++++.+++.+...+.+.++..   .......           ...    . .
T Consensus        83 ~~i~~~~~~~~~~~~~i~~~~~~P~~~~~~I~~~i~~~~~~~~d~~~sv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (229)
T 1qwj_A           83 DAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRHQFRWSEIQKGVREVTEPLNLNPAKRPR  162 (229)
T ss_dssp             HHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEECCCEECCCCSSTTCCCCBSSSBTTBCCC
T ss_pred             HHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf             22111112355566588723577766727899999999858998799998403560777653112345533101233233


Q ss_pred             HHHHHHHHHHHHHCCHHH--HHHHHHCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             678999999987120578--99997526123214501442286442036989899999999999715
Q T0593           132 ESAADELERAILQGIRKI--LVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKMS  196 (208)
Q Consensus       132 ~~~~~~i~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a~~il~~~~  196 (208)
                      ++-++..  +...|...+  ..++..-   .+.......+..+....+||||+|||+.||+++.+-.
T Consensus       163 ~qd~~~~--y~~~g~~~~~k~~~l~~~---~~~~~k~~~~~i~~~~sidIDt~eD~~~aE~ll~k~~  224 (229)
T 1qwj_A          163 RQDWDGE--LYENGSFYFAKRHLIEMG---YLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLRFG  224 (229)
T ss_dssp             TTTSCCE--EEEEEEEEEEEHHHHHTT---CSSCSSEEEEECCGGGCCCHHHHCSHHHHHHHHHHHS
T ss_pred             HCCCCCE--EEEEEEEEEEEHHHHHHC---CCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHC
T ss_conf             3057761--898658999819999648---8668988999879563688999999999999999808


No 34 
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransferase; acetyltransferase, bifunctional, crystallography, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 1g97_A* 1g95_A*
Probab=99.68  E-value=4.9e-16  Score=110.35  Aligned_cols=116  Identities=19%  Similarity=0.187  Sum_probs=83.4

Q ss_pred             EEEEECCCCCCCCC--CCCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCC-CEEECC-CCCHHHHHHHH
Q ss_conf             17886488753566--697602667843798999999726872078725213344431010-000023-44123677888
Q T0593             2 KVAVLVGGVGRRIG--MEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEA-EFIWDL-HKGVGSIAGIH   77 (208)
Q Consensus         2 ~~vIlAaG~gtRlg--~pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~   77 (208)
                      .|||||||+||||.  .||||+||+|+|||+|+++.+...+...++++..+..+....+.. ...... ....+...++.
T Consensus        13 ~AvILagG~GtRl~p~~PK~LlPv~n~PlI~y~l~~L~~~gi~eiiiv~~~~~~~i~~~l~~~i~~~~~~~~~GTa~al~   92 (468)
T 1hm9_A           13 FAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAGQTEFVTQSEQLGTGHAVM   92 (468)
T ss_dssp             EEEEECCCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSSSSEEEECSSCCCHHHHHH
T ss_pred             EEEEECCCCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEECCCCCCHHHHHH
T ss_conf             69998988888769899867748998009999999999779987999959978999998658988997479898399999


Q ss_pred             HHHHHC----CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             877504----9789982788768889999999998507987999
Q T0593            78 AALRHF----GSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALI  117 (208)
Q Consensus        78 ~~~~~~----~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v  117 (208)
                      .+.+..    +..+++..++.+++...+..+++.+..++..+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~  136 (468)
T 1hm9_A           93 MTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATI  136 (468)
T ss_dssp             TTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEE
T ss_pred             HHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf             99997413677640466234102566799999987643123432


No 35 
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.66  E-value=1.9e-16  Score=112.67  Aligned_cols=114  Identities=15%  Similarity=0.098  Sum_probs=70.5

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECC-EEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC-------------
Q ss_conf             917886488753566-----6976026678-437989999997268720787252133444310100-------------
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCG-KKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAE-------------   61 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~G-kpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~-------------   61 (208)
                      ++|||||||+||||.     .||+|+|++| +|||+|+++.+.+.+...++++.++.......+...             
T Consensus        21 ~~AVILAaG~GtRl~PlT~~~PK~LlPv~G~~PlI~y~l~~l~~~gi~~I~vv~~~~~~~i~~~i~~~~~~~~~~~~~~~  100 (451)
T 1yp2_A           21 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG  100 (451)
T ss_dssp             EEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHCC--------CC
T ss_pred             CEEEEECCCCCCCCCHHHCCCCHHHEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             16999899886656863569786306989998599999999998799989999888879999999877776503422467


Q ss_pred             ---EEECCC--C----CHHHHHHHHHHHHH-----CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             ---000234--4----12367788887750-----4978998278876888999999999850798799
Q T0593            62 ---FIWDLH--K----GVGSIAGIHAALRH-----FGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDAL  116 (208)
Q Consensus        62 ---~~~~~~--~----~~~~~~~~~~~~~~-----~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~  116 (208)
                         ......  .    ..+...++......     .++++++.+|.++...  +..++..+...+..++
T Consensus       101 ~~~~~~~~~~~~~~~~~~~t~~al~~~~~~l~~~~~~~~lvl~gD~i~~~~--~~~~~~~~~~~~~~~~  167 (451)
T 1yp2_A          101 FVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMD--YEKFIQAHRETDADIT  167 (451)
T ss_dssp             EEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCC--HHHHHHHHHHTTCSEE
T ss_pred             CEEEEEEEEECCCCCHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCH--HHHHHHHHHHHCCCCE
T ss_conf             248855587314543000021699998776502688858998256334612--4556666665224632


No 36 
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.56  E-value=4.9e-15  Score=104.60  Aligned_cols=114  Identities=18%  Similarity=0.151  Sum_probs=70.7

Q ss_pred             CEEEEECCCCCCCCC-----CCCCCEEECCEE-HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC------------E
Q ss_conf             917886488753566-----697602667843-7989999997268720787252133444310100------------0
Q T0593             1 MKVAVLVGGVGRRIG-----MEKTEVMLCGKK-LIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAE------------F   62 (208)
Q Consensus         1 m~~vIlAaG~gtRlg-----~pK~ll~i~Gkp-li~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~------------~   62 (208)
                      +.|||||||.||||.     .||+|+||+|+| ||+|+++.+...+...++++..+.......+...            .
T Consensus        13 ~~AvILAaG~GtRl~plt~~~PK~LLpv~~kP~lI~y~L~~L~~~gi~~I~vv~~~~~~~i~~~l~~~~~~~~~~~~~~~   92 (420)
T 3brk_X           13 AMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWDFFRPERNESF   92 (420)
T ss_dssp             EEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHSCCCCGGGTCEE
T ss_pred             CEEEEECCCCCCCCCHHHCCCCHHEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf             86999899774667810069774326999886999999999997797989999788989999999777875333114744


Q ss_pred             --------EECCCCCHHHHHHHHHHHHH-----CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             --------00234412367788887750-----4978998278876888999999999850798799
Q T0593            63 --------IWDLHKGVGSIAGIHAALRH-----FGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDAL  116 (208)
Q Consensus        63 --------~~~~~~~~~~~~~~~~~~~~-----~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~  116 (208)
                              ........+...++..++..     .+.++++.+|..  ....+..+++.+.+++..++
T Consensus        93 ~~~~~~~~~~~~~~~~g~~~al~~~~~~l~~~~~~~flv~~~D~i--~~~~l~~~l~~h~~~~~~~t  157 (420)
T 3brk_X           93 DILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHI--YKMDYEYMLQQHVDSGADVT  157 (420)
T ss_dssp             EEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCE--ECBCTHHHHHHHHHTTCSEE
T ss_pred             EECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCCCE
T ss_conf             761636886146334772899999999875369976999888622--23456999999997599967


No 37 
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate guanyltransferase, structural genomics; 2.20A {Thermus thermophilus HB8} SCOP: b.81.4.1 c.68.1.20
Probab=99.48  E-value=2.7e-13  Score=94.56  Aligned_cols=116  Identities=20%  Similarity=0.213  Sum_probs=68.2

Q ss_pred             CE--EEEECCCCCCCC----C--CCCCCEEE-CCEEHHHHHHHHHHHCC-CCEEEE-ECCHHHHHHHHHCCC--EEECCC
Q ss_conf             91--788648875356----6--69760266-78437989999997268-720787-252133444310100--000234
Q T0593             1 MK--VAVLVGGVGRRI----G--MEKTEVML-CGKKLIEWVLEKYSPFQ-TVFVCR-DEKQAEKLSSRYEAE--FIWDLH   67 (208)
Q Consensus         1 m~--~vIlAaG~gtRl----g--~pK~ll~i-~Gkpli~~~i~~l~~~~-~~~~iv-~~~~~~~~~~~~~~~--~~~~~~   67 (208)
                      ||  +||||||.||||    .  .||||+|+ +|+|||+++++++.+.. ...+++ +..............  +...+.
T Consensus         1 Mki~aVILAGG~GtRLwPlS~~~~PKq~l~i~g~~sll~~t~~r~~~~~~~~~i~iv~~~~~~~~~~~~~~~~~ii~Ep~   80 (337)
T 2cu2_A            1 MKTYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADGIRLLLEPL   80 (337)
T ss_dssp             CCEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSSSEEEEESS
T ss_pred             CCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCC
T ss_conf             98128996797304378755679993310069999899999997636588676399972789999742301222224410


Q ss_pred             CCHHHHHHHHH----H-HHHCCCEEEEECCCCCCCHHHHHHHHHHHH---CCCCEEEE
Q ss_conf             41236778888----7-750497899827887688899999999985---07987999
Q T0593            68 KGVGSIAGIHA----A-LRHFGSCVVAAIDMPFVKPEVLEHLYKEGE---KAGCDALI  117 (208)
Q Consensus        68 ~~~~~~~~~~~----~-~~~~~~~lv~~~D~p~~~~~~i~~l~~~~~---~~~~~~~v  117 (208)
                      + .+...++..    . ....+.++++++|..+...+.....+....   +.+..+++
T Consensus        81 ~-rnTa~ai~~a~~~~~~~~~d~vlVlpsDh~i~~~~~f~~~i~~a~~~a~~~~~vt~  137 (337)
T 2cu2_A           81 G-RDTAGAVLLGVAEALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEEGFVVAL  137 (337)
T ss_dssp             C-CHHHHHHHHHHHHHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred             C-CCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             3-57666313445555315786168843530135308878778889999864985886


No 38 
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initiative, nysgrc; 2.30A {Helicobacter pylori 26695}
Probab=99.44  E-value=8.7e-13  Score=91.67  Aligned_cols=117  Identities=17%  Similarity=0.154  Sum_probs=67.3

Q ss_pred             CEEEEECCCCCCCCC------CCCCCEEE-CCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH------CCCEEECCC
Q ss_conf             917886488753566------69760266-78437989999997268720787252133444310------100000234
Q T0593             1 MKVAVLVGGVGRRIG------MEKTEVML-CGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRY------EAEFIWDLH   67 (208)
Q Consensus         1 m~~vIlAaG~gtRlg------~pK~ll~i-~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~------~~~~~~~~~   67 (208)
                      |++||||||.||||-      .||||+|+ +++||++++++++.......+|++...........      ...+....+
T Consensus         5 mk~VILAGG~GtRLwPlS~~~~PKq~l~i~g~~sll~~tl~r~~~~~~~~~IVt~~~~~~~~~~~~~~~~~~~~i~ii~E   84 (308)
T 2qh5_A            5 IKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASLVDETLIVCNEKHYFLALEEIKNEIKNKSVGFLLE   84 (308)
T ss_dssp             EEEEEECC-------------CCGGGCTTBTTBCHHHHHHHHHHTTCSEEEEEEEGGGHHHHHHHTTTTCSSCEEEEEEE
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             06999789632347876668999600373989999999999771779995999897998688888776405665542367


Q ss_pred             C-CHHHHHHHHHH-H-H-HCCCEEEEECCCCCCCHHHHHHHHHHH---HCCCCEEEE
Q ss_conf             4-12367788887-7-5-049789982788768889999999998---507987999
Q T0593            68 K-GVGSIAGIHAA-L-R-HFGSCVVAAIDMPFVKPEVLEHLYKEG---EKAGCDALI  117 (208)
Q Consensus        68 ~-~~~~~~~~~~~-~-~-~~~~~lv~~~D~p~~~~~~i~~l~~~~---~~~~~~~~v  117 (208)
                      + ..+...++..+ + . ..+.++++++|..+-........++.+   .+.+..+++
T Consensus        85 p~~~nta~Ai~~a~~~~~~~~~vlVlpsDh~i~d~~~f~~~i~~~~~~~~~~~ivt~  141 (308)
T 2qh5_A           85 SLSKNTANAIALSALMSDKEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTF  141 (308)
T ss_dssp             SSCCCHHHHHHHHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCCCHHHHHHHHHHHCCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             444653799999998638997699955513204206789999999999736977872


No 39 
>2i5e_A Hypothetical protein MM_2497; APC86122, hypothetic protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei GO1} SCOP: c.68.1.21
Probab=98.36  E-value=1.7e-06  Score=55.54  Aligned_cols=172  Identities=12%  Similarity=0.092  Sum_probs=88.6

Q ss_pred             CEEEEEC--CCCCCCCCC---CCCCEEECCEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEECCCCCHHHHHH
Q ss_conf             9178864--887535666---97602667843798999999726872078725213344431010000023441236778
Q T0593             1 MKVAVLV--GGVGRRIGM---EKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAG   75 (208)
Q Consensus         1 m~~vIlA--aG~gtRlg~---pK~ll~i~Gkpli~~~i~~l~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (208)
                      |.|||.-  +.-=|||..   +..=. ---+-|+.++++.++..+...++++.................   ...+...+
T Consensus         4 m~aviP~K~~~aKTRL~~~L~~~~r~-~L~~~ml~~~l~~l~~~~~~~vi~vt~~~~~~~~~~~~~~~~---~~~~L~~a   79 (211)
T 2i5e_A            4 MRAVIPYKKAGAKSRLSPVLSLQERE-EFVELMLNQVISSLKGAGIEQVDILSPSVYGLEEMTEARVLL---DEKDLNEA   79 (211)
T ss_dssp             CEEEEECCCTTTTGGGTTTSCHHHHH-HHHHHHHHHHHHHHHHTTCSEEEEEESSCTTCSSCCSSEEEE---CCSCHHHH
T ss_pred             EEEEEECCCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCC---CCCCHHHH
T ss_conf             59998779998876877538999999-999999999999998489838999859677888851588565---78888999


Q ss_pred             HHHHHH-HCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             888775-0497899827887688899999999985079879997389232022100067899999998712057899997
Q T0593            76 IHAALR-HFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKHDYPEPLLAYYAESAADELERAILQGIRKILVPLE  154 (208)
Q Consensus        76 ~~~~~~-~~~~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~  154 (208)
                      +..++. ..+.++++.+|.|.++++.+..+++   +....+..|..++.....++..+..+.     ..-|..+...-.+
T Consensus        80 l~~a~~~~~~~vlligsDlP~L~~~~i~~a~~---~~~d~Vi~Pa~DGG~n~l~~~~~~~~~-----f~~g~~S~~~h~~  151 (211)
T 2i5e_A           80 LNRYLKEAEEPVLIVMADLPLLSPEHIKEISS---TEKDVCIVPGKGGGTNALFIKNPSKYR-----VKYYGSSFLTHCS  151 (211)
T ss_dssp             HHHHHHHCCSCEEEECSCCTTCCHHHHHHHTT---CSSSEEEEECGGGCEEEEEESCGGGCC-----CCCSSSHHHHHHH
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH---CCCCEEEEECCCCCEEEEEECCCCCCC-----CCCCCCHHHHHHH
T ss_conf             99999727785899526635289999999986---699789981389986068753776667-----7778516999999


Q ss_pred             HCCEEEECCCCEEEECCCHHHCCCCCCHHHHHHH
Q ss_conf             5261232145014422864420369898999999
Q T0593           155 RLNVVYYPVEKLRKFDKELISFFNINTPDDLKRA  188 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~IdtpeDl~~a  188 (208)
                      .....   .-.+. ....+...+||||||||..+
T Consensus       152 ~a~~~---gl~~~-~~~~~~l~~DIDtpeDL~~l  181 (211)
T 2i5e_A          152 IATDS---GQDFE-IYDSFMAGTDIDEPEDLVEL  181 (211)
T ss_dssp             HHHTT---TCCEE-ECCCTTTTCCCCSHHHHHHH
T ss_pred             HHHHC---CCCEE-EECCCCCCCCCCCHHHHHHH
T ss_conf             99987---99589-81676536279998999999


No 40 
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, structural genomics, joint center for structural genomics, JCSG; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=98.30  E-value=2.5e-06  Score=54.54  Aligned_cols=101  Identities=12%  Similarity=0.171  Sum_probs=59.0

Q ss_pred             EEHHHHHHHHHHHCCCCEEEEE-CCHH--HHHHHHH-CCCEEECCCCCHHHHHHHHHHH-----HHCCCEEEEECCCCCC
Q ss_conf             4379899999972687207872-5213--3444310-1000002344123677888877-----5049789982788768
Q T0593            26 KKLIEWVLEKYSPFQTVFVCRD-EKQA--EKLSSRY-EAEFIWDLHKGVGSIAGIHAAL-----RHFGSCVVAAIDMPFV   96 (208)
Q Consensus        26 kpli~~~i~~l~~~~~~~~iv~-~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~lv~~~D~p~~   96 (208)
                      +-|+.++++.+........+++ ....  ....... ..........+.+....+..+.     ..++.++++.+|+|.+
T Consensus        37 ~~ml~~tl~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~q~g~~Lg~rm~~a~~~~~~~g~~~vliig~DiP~L  116 (242)
T 3cgx_A           37 RHFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWLGPQHMFAAQQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDY  116 (242)
T ss_dssp             HHHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHHCTTSEEEECCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTC
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
T ss_conf             99999999999847996499998288512678887527553242578999899999999999845998489968870215


Q ss_pred             CHHHHHHHHHHHHCCCCEEEEECCCCEECCH
Q ss_conf             8899999999985079879997389232022
Q T0593            97 KPEVLEHLYKEGEKAGCDALIPKHDYPEPLL  127 (208)
Q Consensus        97 ~~~~i~~l~~~~~~~~~~~~v~~~~~~~~~~  127 (208)
                      +++.++.+++....++ .+..|..++.....
T Consensus       117 ~~~~l~~a~~~l~~~~-vVi~Ps~DGG~~li  146 (242)
T 3cgx_A          117 PCELVQKALNDLQHYD-AAIGPAFDGGYYLI  146 (242)
T ss_dssp             CHHHHHHHHHHTTTCS-EEEEEBTTSSEEEE
T ss_pred             CHHHHHHHHHHHCCCC-EEEECCCCCCEEEE
T ss_conf             9799999999836999-89951778987899


No 41 
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=97.93  E-value=6e-06  Score=52.38  Aligned_cols=47  Identities=19%  Similarity=0.323  Sum_probs=35.5

Q ss_pred             EEEECCCCCCCCC--CCCCCEEEC-CEEHHHHHHHHHH------HCCCCEEEEECC
Q ss_conf             7886488753566--697602667-8437989999997------268720787252
Q T0593             3 VAVLVGGVGRRIG--MEKTEVMLC-GKKLIEWVLEKYS------PFQTVFVCRDEK   49 (208)
Q Consensus         3 ~vIlAaG~gtRlg--~pK~ll~i~-Gkpli~~~i~~l~------~~~~~~~iv~~~   49 (208)
                      +|+||||+|||||  .||-++++. |+++++..++++.      ......++-++.
T Consensus        82 vv~LaGGlGTrlG~~~pK~~~~v~~~~tfldl~~~qi~~l~~~~g~~IPl~iMtS~  137 (469)
T 2icy_A           82 VLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSF  137 (469)
T ss_dssp             EEEEECCBSGGGTCCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECT
T ss_pred             EEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf             99956887444589987360584899809999999999999985999658996776


No 42 
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=97.92  E-value=5.5e-06  Score=52.63  Aligned_cols=46  Identities=17%  Similarity=0.326  Sum_probs=34.8

Q ss_pred             EEEECCCCCCCCC--CCCCCEEEC-CEEHHHHHHHHHHH------CCCCEEEEEC
Q ss_conf             7886488753566--697602667-84379899999972------6872078725
Q T0593             3 VAVLVGGVGRRIG--MEKTEVMLC-GKKLIEWVLEKYSP------FQTVFVCRDE   48 (208)
Q Consensus         3 ~vIlAaG~gtRlg--~pK~ll~i~-Gkpli~~~i~~l~~------~~~~~~iv~~   48 (208)
                      +|+||||+|||||  +||-++++. |+++++..+++...      .....++.++
T Consensus        95 vv~LaGGlGTrlG~~~pK~~~~v~~~~tfldl~~~qi~~l~~~~~~~iPl~iMtS  149 (488)
T 2i5k_A           95 VLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNS  149 (488)
T ss_dssp             EEEECCCBSGGGTCCSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred             EEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             9995688424458998737456389980999999999999997299976899457


No 43 
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural genomics, structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=97.88  E-value=1e-05  Score=51.07  Aligned_cols=46  Identities=20%  Similarity=0.373  Sum_probs=34.7

Q ss_pred             EEEECCCCCCCCC--CCCCCEEEC-CEEHHHHHHHHHHH------CCCCEEEEEC
Q ss_conf             7886488753566--697602667-84379899999972------6872078725
Q T0593             3 VAVLVGGVGRRIG--MEKTEVMLC-GKKLIEWVLEKYSP------FQTVFVCRDE   48 (208)
Q Consensus         3 ~vIlAaG~gtRlg--~pK~ll~i~-Gkpli~~~i~~l~~------~~~~~~iv~~   48 (208)
                      +|.||||+|||||  +||-+++|. |+++++..+++...      .....++-++
T Consensus        79 vikLnGGlGTrlG~~~pK~~~~v~~~~tfldl~~~qi~~l~~~~g~~iPl~iMtS  133 (484)
T 3gue_A           79 VLKLNGGLGTGMGLNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNS  133 (484)
T ss_dssp             EEEEECCCCGGGTCSSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEEC
T ss_pred             EEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             9995798755458999707778599990999999999999998599987899799


No 44 
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=97.85  E-value=1.1e-05  Score=50.89  Aligned_cols=46  Identities=26%  Similarity=0.374  Sum_probs=34.5

Q ss_pred             EEEECCCCCCCCC--CCCCCEEEC-CEEHHHHHHHHHHH----CC--CCEEEEEC
Q ss_conf             7886488753566--697602667-84379899999972----68--72078725
Q T0593             3 VAVLVGGVGRRIG--MEKTEVMLC-GKKLIEWVLEKYSP----FQ--TVFVCRDE   48 (208)
Q Consensus         3 ~vIlAaG~gtRlg--~pK~ll~i~-Gkpli~~~i~~l~~----~~--~~~~iv~~   48 (208)
                      +|.||||+|||||  +||-+++|. |+++++..++++..    .+  ...++-++
T Consensus        78 vlkLnGGlGTrmG~~~pKs~i~V~~~~tfldl~~~qi~~l~~~~g~~IPl~iMtS  132 (505)
T 2oeg_A           78 VLKLNGGLGTGMGLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDS  132 (505)
T ss_dssp             EEEEECCCCGGGTCCSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred             EEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             9994798755568998837777699980999999999999998599964899788


No 45 
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=97.79  E-value=2.2e-05  Score=49.13  Aligned_cols=36  Identities=31%  Similarity=0.419  Sum_probs=30.4

Q ss_pred             EEEEECCCCCCCCC--CCCCCEEE---CCEEHHHHHHHHHH
Q ss_conf             17886488753566--69760266---78437989999997
Q T0593             2 KVAVLVGGVGRRIG--MEKTEVML---CGKKLIEWVLEKYS   37 (208)
Q Consensus         2 ~~vIlAaG~gtRlg--~pK~ll~i---~Gkpli~~~i~~l~   37 (208)
                      -+|+||||+|||||  .||-++++   .|+++++..++++.
T Consensus       104 avvllaGG~GtRLG~~~pK~~~~v~l~~~ktl~ql~~e~i~  144 (505)
T 1jv1_A          104 AVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERIL  144 (505)
T ss_dssp             EEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHH
T ss_pred             EEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHH
T ss_conf             99997898556679888850203056788749999999999


No 46 
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N-acetylglucosamine, N-acetylglucosamine- 1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=97.67  E-value=3.4e-05  Score=48.05  Aligned_cols=36  Identities=31%  Similarity=0.398  Sum_probs=30.6

Q ss_pred             EEEEECCCCCCCCC--CCCCCEEEC---CEEHHHHHHHHHH
Q ss_conf             17886488753566--697602667---8437989999997
Q T0593             2 KVAVLVGGVGRRIG--MEKTEVMLC---GKKLIEWVLEKYS   37 (208)
Q Consensus         2 ~~vIlAaG~gtRlg--~pK~ll~i~---Gkpli~~~i~~l~   37 (208)
                      -+|+||||+|||||  .||-++|++   ++++++..++++.
T Consensus       105 avvllaGG~GtRLG~~~pKg~~~i~~~s~ksl~ql~~e~i~  145 (486)
T 2yqc_A          105 AVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKIL  145 (486)
T ss_dssp             EEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHH
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             99997788654468788876421258999839999999999


No 47 
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI- II, NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis nctc 9343}
Probab=45.70  E-value=13  Score=16.02  Aligned_cols=94  Identities=14%  Similarity=0.165  Sum_probs=52.2

Q ss_pred             CCEEHHHHHHHHHHHCC--CCEEEEECC----HHHHHHHHH---CCCEEECCCCCHHHHHHHHHHHHHCC-CEEEEECCC
Q ss_conf             78437989999997268--720787252----133444310---10000023441236778888775049-789982788
Q T0593            24 CGKKLIEWVLEKYSPFQ--TVFVCRDEK----QAEKLSSRY---EAEFIWDLHKGVGSIAGIHAALRHFG-SCVVAAIDM   93 (208)
Q Consensus        24 ~Gkpli~~~i~~l~~~~--~~~~iv~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lv~~~D~   93 (208)
                      +....|..+++.+.+..  ...++++.+    .........   ............+...+...+++.+. +++++..|.
T Consensus        15 N~~~~l~~~l~Sl~~q~~~~~EIiivDd~S~d~t~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~gi~~a~~d~i~~ld~D   94 (240)
T 3bcv_A           15 NVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHKKNAGLGMACNSGLDVATGEYVAFCDSD   94 (240)
T ss_dssp             SCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEECCCCCHHHHHHHHHHHCCSSEEEECCTT
T ss_pred             CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             88899999999998087989799999899980578887765114442036224679879999999996577989997798


Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             768889999999998507987999
Q T0593            94 PFVKPEVLEHLYKEGEKAGCDALI  117 (208)
Q Consensus        94 p~~~~~~i~~l~~~~~~~~~~~~v  117 (208)
                      .++.++.++.+++.+.+.+.++++
T Consensus        95 ~~~~~~~l~~~~~~~~~~~~d~v~  118 (240)
T 3bcv_A           95 DYVDSDMYMTMYNVAQKYTCDAVF  118 (240)
T ss_dssp             CCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred             CEECCCHHHHHHHHHHHCCCCEEE
T ss_conf             505830899999999818998999


No 48 
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=32.33  E-value=21  Score=14.78  Aligned_cols=97  Identities=13%  Similarity=0.029  Sum_probs=54.3

Q ss_pred             EEE-CCEEHHHHHHHHHHHCC---CCEEEEEC----CHHHHHHHHHCCCEE------ECCCCCHHHHHHHHHHHHHCC--
Q ss_conf             266-78437989999997268---72078725----213344431010000------023441236778888775049--
Q T0593            21 VML-CGKKLIEWVLEKYSPFQ---TVFVCRDE----KQAEKLSSRYEAEFI------WDLHKGVGSIAGIHAALRHFG--   84 (208)
Q Consensus        21 l~i-~Gkpli~~~i~~l~~~~---~~~~iv~~----~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--   84 (208)
                      +|. |...-|..+++.+.+..   ...+|++.    +...+........+.      .....+.|...++..++..+.  
T Consensus        54 IP~yNe~~~I~~~l~si~~~~~~~~~EIIVVDDgStD~T~ei~~~~~a~v~~~~~~~~~~~~n~G~g~A~n~G~~~A~gd  133 (329)
T 3ckj_A           54 LPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPGKGEALWRSLAASRGD  133 (329)
T ss_dssp             EEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCSHHHHHHHHHHHCCCS
T ss_pred             ECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf             81687888999999999852469996899998989540899999843301465326873455578899999999973636


Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             789982788768889999999998507987999
Q T0593            85 SCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALI  117 (208)
Q Consensus        85 ~~lv~~~D~p~~~~~~i~~l~~~~~~~~~~~~v  117 (208)
                      .++++.+|.-...++.+..++..+.......++
T Consensus       134 ~i~~lDaD~~~~~p~~l~~l~~~l~~~~~~~~v  166 (329)
T 3ckj_A          134 IVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLV  166 (329)
T ss_dssp             EEEECCTTEESCCTTHHHHHHHHHHSCSSCCEE
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf             589982788889999999999999809985478


No 49 
>1j2j_B ADP-ribosylation factor binding protein GGA1, ADP-ribosylation factor 1; protein transport; HET: GTP; 1.60A {Homo sapiens} SCOP: a.7.8.1
Probab=28.75  E-value=25  Score=14.42  Aligned_cols=23  Identities=26%  Similarity=0.567  Sum_probs=18.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             03698989999999999971557
Q T0593           176 FFNINTPDDLKRAEEICSKMSTE  198 (208)
Q Consensus       176 ~~~IdtpeDl~~a~~il~~~~~~  198 (208)
                      ++.=..||||+.|.++++.+-.+
T Consensus        16 LLkS~~PeDLq~ANrLIK~mVke   38 (45)
T 1j2j_B           16 LLKSSHPEDLRAANKLIKEMVQE   38 (45)
T ss_dssp             HHTCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             98259878999999999999988


No 50 
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=24.00  E-value=24  Score=14.47  Aligned_cols=88  Identities=13%  Similarity=0.117  Sum_probs=39.0

Q ss_pred             CEEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHHHC--CCCEEEEECCHHH-H---HHHHHCCCEEECC----CCCH
Q ss_conf             917886488753566697602667843798999999726--8720787252133-4---4431010000023----4412
Q T0593             1 MKVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPF--QTVFVCRDEKQAE-K---LSSRYEAEFIWDL----HKGV   70 (208)
Q Consensus         1 m~~vIlAaG~gtRlg~pK~ll~i~Gkpli~~~i~~l~~~--~~~~~iv~~~~~~-~---~~~~~~~~~~~~~----~~~~   70 (208)
                      |+.+||+.|.||               -++.++++++.-  ...++.++++... .   .............    ....
T Consensus         1 Mki~il~SG~Gs---------------nl~~ll~a~~~~~l~~~I~~Visn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (212)
T 1jkx_A            1 MNIVVLISGNGS---------------NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSRE   65 (212)
T ss_dssp             CEEEEEESSCCH---------------HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHH
T ss_pred             CEEEEEEECCCH---------------HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCHH
T ss_conf             979999826847---------------89999998870999988999997898627788877505650565123579988


Q ss_pred             HHHHHHHHHHHHCCCEEEEE-CCCCCCCHHHHHH
Q ss_conf             36778888775049789982-7887688899999
Q T0593            71 GSIAGIHAALRHFGSCVVAA-IDMPFVKPEVLEH  103 (208)
Q Consensus        71 ~~~~~~~~~~~~~~~~lv~~-~D~p~~~~~~i~~  103 (208)
                      ..-..+...+......+++. +=+-.+++++++.
T Consensus        66 ~~~~~~~~~l~~~~~Dliv~~g~~~il~~~il~~   99 (212)
T 1jkx_A           66 AYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSH   99 (212)
T ss_dssp             HHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEECHHHHCCHHHHHH
T ss_conf             9999999999970999999815245579999865


No 51 
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A*
Probab=22.30  E-value=33  Score=13.72  Aligned_cols=40  Identities=13%  Similarity=0.146  Sum_probs=15.5

Q ss_pred             EEEEECCCCCCCCCCC-CCCEEECCEEHHHHHHHHHHHCCCC
Q ss_conf             1788648875356669-7602667843798999999726872
Q T0593             2 KVAVLVGGVGRRIGME-KTEVMLCGKKLIEWVLEKYSPFQTV   42 (208)
Q Consensus         2 ~~vIlAaG~gtRlg~p-K~ll~i~Gkpli~~~i~~l~~~~~~   42 (208)
                      ++||++||..++=|.. .-|+.. +.+++..+.+.+.+.+..
T Consensus        76 Divvi~aG~~rkpg~~R~dll~~-Na~I~~~i~~~i~~~~p~  116 (317)
T 3d0o_A           76 DLVVICAGAAQKPGETRLDLVSK-NLKIFKSIVGEVMASKFD  116 (317)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHH-HHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHCCCCC
T ss_conf             48998325555888752567777-788887776663026775


No 52 
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=20.89  E-value=27  Score=14.23  Aligned_cols=12  Identities=42%  Similarity=0.833  Sum_probs=10.7

Q ss_pred             CEEEEECCCCCC
Q ss_conf             917886488753
Q T0593             1 MKVAVLVGGVGR   12 (208)
Q Consensus         1 m~~vIlAaG~gt   12 (208)
                      ||+.|++||.|+
T Consensus         4 mki~il~GG~S~   15 (322)
T 2fb9_A            4 MRVLLIAGGVSP   15 (322)
T ss_dssp             CCEEEEEECSST
T ss_pred             CEEEEEECCCCC
T ss_conf             789999387873


Done!