Query T0594 pfc0360w, Plasmodium Falciparum, 140 residues Match_columns 140 No_of_seqs 112 out of 1064 Neff 8.0 Searched_HMMs 22458 Date Mon Jul 5 08:56:00 2010 Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0594.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0594.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1x53_A Activator of 90 kDa hea 100.0 1.9E-31 8.5E-36 209.0 13.9 129 2-139 11-139 (145) 2 2il5_A Hypothetical protein; s 99.9 3.5E-25 1.6E-29 171.1 14.7 134 2-137 14-167 (171) 3 1xn6_A Hypothetical protein BC 99.9 2.3E-24 1E-28 166.1 13.1 126 3-136 9-142 (143) 4 1z94_A Conserved hypothetical 99.9 2E-23 9.1E-28 160.4 16.1 127 2-136 3-142 (147) 5 3eli_A AHSA1, AHA1 domain prot 99.9 4E-23 1.8E-27 158.6 15.1 127 2-136 2-144 (152) 6 2kew_A Uncharacterized protein 99.9 1.9E-23 8.6E-28 160.5 12.8 125 3-136 11-143 (152) 7 2k5g_A Uncharacterized protein 99.9 3.1E-23 1.4E-27 159.3 13.7 125 1-137 18-162 (191) 8 1xuv_A Hypothetical protein MM 99.9 1.7E-22 7.7E-27 154.8 15.2 131 2-135 22-165 (178) 9 1xfs_A NC_840354, conserved hy 99.9 7.8E-23 3.5E-27 156.9 13.1 130 2-135 10-164 (178) 10 1xn5_A BH1534 unknown conserve 99.9 2.3E-22 1E-26 154.0 14.3 126 2-136 5-138 (146) 11 1zxf_A CALC; SELF-sacrificing 99.9 2.1E-22 9.5E-27 154.2 11.6 131 3-136 5-149 (155) 12 2nn5_A Hypothetical protein EF 99.9 1.6E-21 7.1E-26 148.9 14.6 121 2-137 36-158 (184) 13 3ijt_A SMU.440, putative uncha 99.1 1E-09 4.6E-14 77.4 13.1 126 2-135 18-152 (155) 14 3ggn_A Uncharacterized protein 98.8 1.8E-07 8.1E-12 63.8 14.3 128 3-135 5-144 (155) 15 2ns9_A Hypothetical protein AP 98.8 3E-07 1.3E-11 62.5 13.5 132 2-136 13-155 (157) 16 3f08_A Uncharacterized protein 98.7 3.8E-07 1.7E-11 61.9 12.9 128 3-135 3-136 (146) 17 2pcs_A Conserved protein; stru 98.5 5.3E-06 2.4E-10 54.9 12.9 137 2-139 3-150 (162) 18 2qpv_A Uncharacterized protein 98.3 2.9E-06 1.3E-10 56.6 8.9 123 3-135 28-153 (156) 19 2kf2_A Putative polyketide cyc 98.3 1.5E-05 6.8E-10 52.1 12.6 128 3-135 4-144 (167) 20 2d4r_A Hypothetical protein TT 98.3 3.3E-05 1.5E-09 50.1 13.5 126 3-134 3-141 (147) 21 2rer_A Multifunctional cyclase 98.1 6E-05 2.7E-09 48.6 12.5 128 3-135 7-147 (173) 22 1tw0_A Pathogenesis-related cl 97.2 0.0053 2.4E-07 36.8 11.0 98 2-101 3-117 (157) 23 3jrs_A PYL1, putative uncharac 97.2 0.0098 4.4E-07 35.2 12.0 84 5-89 57-154 (208) 24 3k3k_A Abscisic acid receptor 96.7 0.031 1.4E-06 32.2 12.0 82 5-88 53-149 (211) 25 3kdh_A PYL2, putative uncharac 96.5 0.039 1.7E-06 31.5 12.1 83 4-87 37-132 (190) 26 2flh_A Cytokinin-specific bind 96.4 0.047 2.1E-06 31.1 13.8 100 2-102 3-119 (155) 27 2vjg_A Major allergen DAU C 1; 96.0 0.073 3.3E-06 29.9 14.6 100 2-102 4-119 (154) 28 1e09_A PRU AV 1; allergen, maj 96.0 0.075 3.3E-06 29.8 12.1 99 2-101 3-118 (159) 29 2i9y_A Major latex protein-lik 96.0 0.028 1.2E-06 32.4 7.6 98 3-101 18-132 (166) 30 2qim_A PR10.2B; trans-zeatin, 94.7 0.2 8.9E-06 27.2 14.5 98 2-101 4-118 (158) 31 2vq5_A S-norcoclaurine synthas 94.7 0.2 9E-06 27.2 11.2 98 3-101 30-144 (201) 32 1t17_A Conserved hypothetical 94.3 0.13 5.6E-06 28.4 6.8 98 3-103 3-112 (148) 33 3ie5_A Phenolic oxidative coup 94.1 0.27 1.2E-05 26.5 12.8 98 2-101 10-124 (165) 34 2ffs_A Hypothetical protein PA 93.1 0.4 1.8E-05 25.4 9.4 120 13-135 21-146 (157) 35 3fo5_A Thioesterase, adipose a 78.2 1.8 8E-05 21.4 3.8 30 2-31 88-117 (258) 36 1jss_A Stard4, cholesterol-reg 78.1 2 9.1E-05 21.1 4.0 31 2-32 67-97 (224) 37 1vjh_A BET V I allergen family 45.1 14 0.00061 16.1 9.4 77 3-100 6-86 (122) 38 2r55_A STAR-related lipid tran 35.1 20 0.00088 15.2 4.0 31 1-31 66-98 (231) No 1 >1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5 Probab=99.97 E-value=1.9e-31 Score=208.99 Aligned_cols=129 Identities=31% Similarity=0.676 Sum_probs=117.9 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCEEEEEEECCCCCCCCCE Q ss_conf 07899988779989999973397688886189976323456833787032110289997679189999813788889850 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLFSGSILGEFTEITKPHKIVEKWKFRDWNECDYS 81 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~~g~~~G~~~e~~p~~~i~~tw~~~~~~~~~~s 81 (140) .+|+++++|+|||++||+|||+|+++++||.+ ...+|+++||.|.+.++.+.|+|++++||+||+|+|++.+++++..+ T Consensus 11 ~~i~~~~~f~ap~e~Vw~Alt~pe~l~~W~~~-~~~~d~~~GG~~~~~~g~~~G~~~ev~p~~rl~~tw~~~~~~~~~~s 89 (145) T 1x53_A 11 CKITLKETFLTSPEELYRVFTTQELVQAFTHA-PATLEADRGGKFHMVDGNVSGEFTDLVPEKHIVMKWRFKSWPEGHFA 89 (145) T ss_dssp EEEEEEEEESSCHHHHHHHTTCHHHHHHHSCS-CCBCCCSTTCCCBBTTTTEECCEEEEETTTEEEEEEEETTSCTTCCE T ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCC-CCCCCCEECCEEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCE T ss_conf 69999999799999999997398997323245-54334311424899960222689998079889999870567788757 Q ss_pred EEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCC Q ss_conf 8999986338994699999758775533210134536641558899998898517899 Q T0594 82 TVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVILGYPK 139 (140) Q Consensus 82 ~v~~~~~~~~~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~g~~~ 139 (140) .|+++|.+ .+++|+|+|+|+|+|+. ..+++++||+++||++||++|||-+ T Consensus 90 ~vt~~l~~-~~~~T~L~l~~~g~p~~-------~~e~~~~GW~~~~l~~Lk~~~g~g~ 139 (145) T 1x53_A 90 TITLTFID-KNGETELCMEGRGIPAP-------EEERTRQGWQRYYFEGIKQTFGYGA 139 (145) T ss_dssp EEEEECCB-CSSCEEEEEEEEEEEHH-------HHHHHHHTTHHHHHHHHHHHTCCCC T ss_pred EEEEEEEE-CCCEEEEEEEEECCCCH-------HHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 99999998-69918999999789803-------7999987788999999998620899 No 2 >2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, protein structure initiative, midwest center for structural genomics; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5 Probab=99.93 E-value=3.5e-25 Score=171.05 Aligned_cols=134 Identities=18% Similarity=0.312 Sum_probs=112.1 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCC-----CCCCCCCCCEEEECC----C---EEEEEEEEEECCCEEEEE Q ss_conf 0789998877998999997339768888618997-----632345683378703----2---110289997679189999 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSL-----AEVDLKVGGKFSLFS----G---SILGEFTEITKPHKIVEK 69 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~-----~~~d~~~Gg~~~~~~----g---~~~G~~~e~~p~~~i~~t 69 (140) .+|++++.|+|||++||+|||+|+++.+||.|.. ..+|+++||.|++.+ | ...|+|++++||+||+|+ T Consensus 14 ~~i~i~r~~~ap~e~Vw~a~T~pe~l~~W~~p~~~~~~~~~~d~~~GG~~~~~~~~~~g~~~~~~g~~~ev~p~~rl~~t 93 (171) T 2il5_A 14 VEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYVKMT 93 (171) T ss_dssp EEEEEEEEESSCHHHHHHHTTCHHHHTTTSSSCTTTEEEEEECCSTTCEEEEEEECGGGCEEEEEEEEEEEETTTEEEEE T ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEEE T ss_conf 59999999779999999997498998027579995226788851038605778877999788888999995399789999 Q ss_pred EECCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCC--------CCHHHHHHHHCCHHHHHHHHHHHHCCC Q ss_conf 81378888985089999863389946999997587755332--------101345366415588999988985178 Q T0594 70 WKFRDWNECDYSTVTVEFISVKENHTKLKLTHNNIPASNKY--------NEGGVLERCKNGWTQNFLHNIEVILGY 137 (140) Q Consensus 70 w~~~~~~~~~~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~--------~~~~~~e~~~~GW~~~~~~~lk~~~g~ 137 (140) |++.+.++ ..+.+++.|.++.+|+|+|+++|+++++.+.. ......++++.||.. +|++|++++.= T Consensus 94 ~~~~~~~~-~~~~~~~~~~~~~~ggT~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~-~l~~L~~~le~ 167 (171) T 2il5_A 94 IGMPGLSE-TQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFEL-MFDKMYHVIET 167 (171) T ss_dssp ESCC--CC-CCEEEEEEEEECSSSSEEEEEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHT T ss_pred EECCCCCC-CCEEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH T ss_conf 85268899-9639999999758997999999981480675410000344567788889888999-99999999960 No 3 >1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5 Probab=99.92 E-value=2.3e-24 Score=166.10 Aligned_cols=126 Identities=16% Similarity=0.285 Sum_probs=107.5 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEECC--CEEEEEEEEEECCCEEEEEEECCCCCCCCC Q ss_conf 789998877998999997339768888618997632345683378703--211028999767918999981378888985 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLFS--GSILGEFTEITKPHKIVEKWKFRDWNECDY 80 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~~--g~~~G~~~e~~p~~~i~~tw~~~~~~~~~~ 80 (140) +|++++.|+|||++||+|||+|+++++||.+ ..+++++||+|.+.+ +.+.|+|++++||++|+|+|+.. . T Consensus 9 ~i~~~~~i~ap~e~Vw~alTdp~~~~~W~~~--~~~~~~~Gg~~~~~~~~g~~~g~v~~~~p~~~l~~tw~~~------~ 80 (143) T 1xn6_A 9 DIKQTIVFNASIQKVWSVVSTAEGIASWFMP--NDFVLEVGHEFHVQSPFGPSPCKVLEIDEPNHLSFSWDTD------G 80 (143) T ss_dssp CEEEEEEESSCHHHHHHTTSCSHHHHTTSCC--BCCCCCTTCEECBCCTTCCCCEEEEEEETTTEEEEEETTT------T T ss_pred EEEEEEEECCCHHHHHHHHCCHHHHCEEEEC--CCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEEECCC------C T ss_conf 6999999899999999987296661347434--6775122258999510451008999980796899998699------9 Q ss_pred EEEEEEEEECCCCCEEEEEEECCCCCCCCC------CCHHHHHHHHCCHHHHHHHHHHHHCC Q ss_conf 089999863389946999997587755332------10134536641558899998898517 Q T0594 81 STVTVEFISVKENHTKLKLTHNNIPASNKY------NEGGVLERCKNGWTQNFLHNIEVILG 136 (140) Q Consensus 81 s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~------~~~~~~e~~~~GW~~~~~~~lk~~~g 136 (140) +.|+++|.+.++|+|+|+|+|+|+++.+.. ......+++.+||...+.++||+++- T Consensus 81 ~~v~~~l~~~~~G~T~l~~~h~g~~~~~~~~~~~~~~~~~~~~~~~~GW~~~l~~~Lk~~vE 142 (143) T 1xn6_A 81 WVVSFDLKDLGDNKTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIVNEKLKKVVE 142 (143) T ss_dssp EEEEEEEEEEETTEEEEEEEEECCCSTTCBCTTTCSBHHHHHHHHHHHHHHHHTTHHHHHHH T ss_pred CEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHC T ss_conf 58999999668994999999837787426665402014678888753879999999999838 No 4 >1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI, protein structure initiative; 2.10A {Chromobacterium violaceum atcc 12472} SCOP: d.129.3.5 Probab=99.91 E-value=2e-23 Score=160.36 Aligned_cols=127 Identities=21% Similarity=0.343 Sum_probs=107.2 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCC-----CCCCCCCCCEEEECCC--------EEEEEEEEEECCCEEEE Q ss_conf 0789998877998999997339768888618997-----6323456833787032--------11028999767918999 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSL-----AEVDLKVGGKFSLFSG--------SILGEFTEITKPHKIVE 68 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~-----~~~d~~~Gg~~~~~~g--------~~~G~~~e~~p~~~i~~ 68 (140) .+|+++++|+|||++||+|||||+.+.+||.+.. ...++++||.|.+... .+.|+|++++||++|++ T Consensus 3 ~~i~v~r~i~ap~e~Vw~a~tdp~~~~~W~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~~g~~~~~~g~v~~~~p~~rl~~ 82 (147) T 1z94_A 3 NTIRLHRVLSAPPERVYRAFLDPLALAKWLPPEGFVCKVLEHDARVGGAYKMEFLAFASGQKHAFGGRYLELVPGERIRY 82 (147) T ss_dssp CCEEEEEEESSCHHHHHHHTTCHHHHHHHSSCTTEEEEEEEECCSTTCEEEEEEEETTTCCEEEEEEEEEEEETTTEEEE T ss_pred CEEEEEEEECCCHHHHHHHHCCHHHHCEECCCCCCEEEEEEECCEECEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEE T ss_conf 77999999789999999986397784004079982444666533664078999830799963358999997179989999 Q ss_pred EEECCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC Q ss_conf 98137888898508999986338994699999758775533210134536641558899998898517 Q T0594 69 KWKFRDWNECDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVILG 136 (140) Q Consensus 69 tw~~~~~~~~~~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~g 136 (140) +|++.+......+.++++|.+. +++|+|+++|+++++.. ..++++.||.. .|++|++++- T Consensus 83 ~~~~~~~~~~~~~~v~~~l~~~-~~gT~l~~~~~~~~~~~------~~~~~~~GW~~-~l~~L~~~lE 142 (147) T 1z94_A 83 TDRFDDAGLPGDMITTITLAPL-SCGADLSIVQEGIPDAI------PPENCYLGWQQ-SLKQLAALVE 142 (147) T ss_dssp EEEESCCC---CEEEEEEEEEE-TTEEEEEEEEECCCTTS------CHHHHHHHHHH-HHHHHHHHHS T ss_pred EEECCCCCCCCCEEEEEEEEEC-CCCEEEEEEEECCCCHH------HHHHHHHHHHH-HHHHHHHHHC T ss_conf 9830588888767999999984-99989999996588777------89889999999-9999999976 No 5 >3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5 Probab=99.91 E-value=4e-23 Score=158.59 Aligned_cols=127 Identities=20% Similarity=0.326 Sum_probs=104.2 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCC-------CCCCCCCCCCEEEECCC-------EEEEEEEEEECCCEEE Q ss_conf 078999887799899999733976888861899-------76323456833787032-------1102899976791899 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGS-------LAEVDLKVGGKFSLFSG-------SILGEFTEITKPHKIV 67 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~-------~~~~d~~~Gg~~~~~~g-------~~~G~~~e~~p~~~i~ 67 (140) .+|+++++|+|||++||+|||||+.+++||.+. .+++++++||+|.+.+. .+.|+|++++||++|+ T Consensus 2 ~ei~~~r~i~ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~~~d~~~GG~~~~~~~~~~g~~~~~~g~v~~~~p~~rl~ 81 (152) T 3eli_A 2 ADLRLEREFAVAPEALFAWVSDGAKLLQWWGPEGLHVPADQHDLDFTRLGPWFSVMVNGEGQRYKVSGQVTHVKPPQSVG 81 (152) T ss_dssp CEEEEEEEESSCHHHHHHHTTCHHHHHHHCSSTTCBCCTTSBCCCCSSSEEEEEEEECTTCCEEEEEEEEEEEETTTEEE T ss_pred CEEEEEEEECCCHHHHHHHHCCHHHHCEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCEEE T ss_conf 73999999849999999986397673157478984332145788252695299999889996777899999985898899 Q ss_pred EEEECCCCCC--CCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC Q ss_conf 9981378888--98508999986338994699999758775533210134536641558899998898517 Q T0594 68 EKWKFRDWNE--CDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVILG 136 (140) Q Consensus 68 ~tw~~~~~~~--~~~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~g 136 (140) |+|++.+.++ ...+.|+++|.+ .+++|+|+|+|+++++.+ ..++++.||.. +|++|++++. T Consensus 82 ~tw~~~~~~~~~~~~~~v~~~l~~-~~~gT~l~l~~~~~~~~~------~~~~~~~GW~~-~L~~L~~~la 144 (152) T 3eli_A 82 FTWGWHDDDDRRGAESHVMFIVEP-CAKGARLILDHRELGDDE------MSLRHEEGWTS-SLRKLAAELA 144 (152) T ss_dssp EEEEEECTTSCEEEEEEEEEECCB-C--CEEEEEEEESCSCHH------HHHHHHHHHHH-HHHHHHHHHH T ss_pred EEEEECCCCCCCCCCEEEEEEEEE-CCCCEEEEEEEECCCCHH------HHHHHHHHHHH-HHHHHHHHHC T ss_conf 998606788888973899999998-799799999998589989------99899999999-9999999857 No 6 >2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown function, PSI-2; NMR {Bacillus subtilis subsp} Probab=99.90 E-value=1.9e-23 Score=160.51 Aligned_cols=125 Identities=15% Similarity=0.227 Sum_probs=105.0 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEC--CCEEEEEEEEEECCCEEEEEEECCCCCCCCC Q ss_conf 78999887799899999733976888861899763234568337870--3211028999767918999981378888985 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLF--SGSILGEFTEITKPHKIVEKWKFRDWNECDY 80 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~--~g~~~G~~~e~~p~~~i~~tw~~~~~~~~~~ 80 (140) +|+++++|+|||++||+|||+|+.+++||.+ ..+++++||+|.+. .|...|+|++++||++|+|+|+.. . T Consensus 11 ~I~~~~~i~Ap~e~Vw~altdpe~l~~W~~~--~~~~~~~Gg~~~~~~~~g~~~g~v~~~~p~~~l~~tw~~~------~ 82 (152) T 2kew_A 11 DITKSITLEAPIQKVWETVSTSEGIAKWFMP--NDFQLKEGQEFHLQSPFGPSPCKVLAVQAPTELSFEWDTE------G 82 (152) T ss_dssp CEEEEEEECSCHHHHHHHSSSSHHHHHHHCS--CCCCSCSSCCBCSSSSCCSCCBEEEEEETTTEEEEECTTS------C T ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHCCCC--CCCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEECCC------C T ss_conf 1999999829999999987087565022478--8754565748999824785558999982797899997699------9 Q ss_pred EEEEEEEEECCCCCEEEEEEECCCCCCCC------CCCHHHHHHHHCCHHHHHHHHHHHHCC Q ss_conf 08999986338994699999758775533------210134536641558899998898517 Q T0594 81 STVTVEFISVKENHTKLKLTHNNIPASNK------YNEGGVLERCKNGWTQNFLHNIEVILG 136 (140) Q Consensus 81 s~v~~~~~~~~~g~T~l~l~~~g~~~~~~------~~~~~~~e~~~~GW~~~~~~~lk~~~g 136 (140) ++|+++|.+ .+++|+|+|+|+|++..+. .....++++|.+||...++++||+++- T Consensus 83 ~~vt~~l~~-~~~gT~ltl~h~g~~~~~~~~~~~~~~~~~~~~~~~~GW~~~l~~~Lk~~lE 143 (152) T 2kew_A 83 WVVTFQLED-LGEKTGFTLIHSGWKEPNQVIGKANEKSSVVRGKMDGGWTGIVNERLRKAVE 143 (152) T ss_dssp CEEEEEEEC-CSSCEEEEEEECCSSCCSBCSSSSSSBHHHHHHHHHHHHHHHTTTHHHHHHT T ss_pred CEEEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 299999997-7997999999958888503333310002456765610789999999999996 No 7 >2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5 Probab=99.90 E-value=3.1e-23 Score=159.31 Aligned_cols=125 Identities=19% Similarity=0.223 Sum_probs=103.6 Q ss_pred CEEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEECCC--------------------EEEEEEEEE Q ss_conf 907899988779989999973397688886189976323456833787032--------------------110289997 Q T0594 1 GMSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLFSG--------------------SILGEFTEI 60 (140) Q Consensus 1 g~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~~g--------------------~~~G~~~e~ 60 (140) +.+|+++|+|+||+++||+|||+|+++++||.+ ..+++++||.+.+.++ .+.|+|+++ T Consensus 18 ~~tl~ieR~~~Ap~e~Vw~AlTdp~~l~~W~~p--~~~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~e~ 95 (191) T 2k5g_A 18 AQSIRFERLLPGPIERVWAWLADADKRARWLAG--GELPRQPGQTFELHFNHAALTAETAPARYAQYDRPIVARHTLLRC 95 (191) T ss_dssp CSSEEEEEEESSSSHHHHHHHHCHHHHTTTSCC--CCCCSSTTCEEEEEECGGGSCCSSCCSSCSGGGSCEEEEEEEEEE T ss_pred CCEEEEEEEECCCHHHHHHHHHCHHHHHHHCCC--CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEE T ss_conf 667999999679999999998195989854678--874131287899997368865211121114778633688999999 Q ss_pred ECCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCC Q ss_conf 67918999981378888985089999863389946999997587755332101345366415588999988985178 Q T0594 61 TKPHKIVEKWKFRDWNECDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVILGY 137 (140) Q Consensus 61 ~p~~~i~~tw~~~~~~~~~~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~g~ 137 (140) +||++|+|+|...+.+ ..+.|+++|.+ .+++|+|+|+|+|+++.+ ..+++..||.. +|++|++++.. T Consensus 96 ep~~rL~~tw~~~~~~--~~s~V~~~l~~-~g~gT~Ltlth~g~~~~~------~~~~~~~GW~~-~Ld~L~~~leg 162 (191) T 2k5g_A 96 EPPRVLALTWGGGAGE--APSEVLFELSE-AGEQVRLVLTHTRLADRA------AMLDVAGGWHA-HLAVLAGKLAG 162 (191) T ss_dssp ETTTEEEEECCCCSSS--SCCEEEEEEEE-CSSSEEEEEEEECCCSHH------HHHHHTTTTTT-HHHHHHHHHHT T ss_pred ECCCEEEEEEECCCCC--CCEEEEEEEEE-CCCCEEEEEEEECCCCHH------HHHHHHHHHHH-HHHHHHHHHCC T ss_conf 7684899996268898--76056788863-499399999994789856------67678763999-99999998789 No 8 >1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5 Probab=99.90 E-value=1.7e-22 Score=154.76 Aligned_cols=131 Identities=22% Similarity=0.339 Sum_probs=105.0 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCC-----CCCCCCCCCEEEECC----C---EEEEEEEEEECCCEEEEE Q ss_conf 0789998877998999997339768888618997-----632345683378703----2---110289997679189999 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSL-----AEVDLKVGGKFSLFS----G---SILGEFTEITKPHKIVEK 69 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~-----~~~d~~~Gg~~~~~~----g---~~~G~~~e~~p~~~i~~t 69 (140) .+|+++|+|+|||++||+|||||+.+.+||.+.. ..+|+++||.|.+.+ | .+.|+|++++||++|+|+ T Consensus 22 ~~i~v~r~i~Ap~e~Vw~a~tdpe~l~~W~~p~~~~~~~~~~d~~~GG~~~~~~~~~~G~~~~~~~~v~ei~pp~rl~~t 101 (178) T 1xuv_A 22 QEIIITREFDAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFEPKNGGSWQYIQKDPEGNEYAFHGVNHDVTEPERIIST 101 (178) T ss_dssp SEEEEEEEESSCHHHHHHHHHCHHHHTTTCSSTTCEEEEEEECCSTTCEEEEEEECTTSCEEEEEEEEEEEETTTEEEEE T ss_pred CEEEEEEEECCCHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEEE T ss_conf 67999999689999999997498998530289993623677862118559999973789703579999983599789999 Q ss_pred EECCCCCC-CCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHC Q ss_conf 81378888-9850899998633899469999975877553321013453664155889999889851 Q T0594 70 WKFRDWNE-CDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVIL 135 (140) Q Consensus 70 w~~~~~~~-~~~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~ 135 (140) |.+.+.++ +..+.++++|.+.++++|++++.+ +++..+ ........+++.||+. +|++|++++ T Consensus 102 w~~~~~~~~~~~s~v~~~f~~~~~g~t~~~~~~-~~~~~~-~~~~~~~~g~~~GW~~-~L~~L~~~l 165 (178) T 1xuv_A 102 FEFEGLPEKGHVILDTARFEALPGDRTKLTSHS-VFQTIE-DRDGMLQSGMEEGIND-SYERLDELL 165 (178) T ss_dssp EEETTSSSSCCCEEEEEEEEEETTTEEEEEEEE-ECSSHH-HHHHHHHTTHHHHHHH-HHHHHHHHH T ss_pred EECCCCCCCCCCEEEEEEEECCCCCCEEEEEEE-CCCCHH-HHHHHHHHHHHHHHHH-HHHHHHHHH T ss_conf 851678888864799999852689858999996-289989-9999999779999999-999999999 No 9 >1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, alpha-beta protein, PSI; 1.70A {Nitrosomonas europaea atcc 19718} SCOP: d.129.3.5 Probab=99.89 E-value=7.8e-23 Score=156.85 Aligned_cols=130 Identities=17% Similarity=0.221 Sum_probs=104.9 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCC-----CCCCCCCCCEEEECC-------CEEEEEEEEEECCCEEEEE Q ss_conf 0789998877998999997339768888618997-----632345683378703-------2110289997679189999 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSL-----AEVDLKVGGKFSLFS-------GSILGEFTEITKPHKIVEK 69 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~-----~~~d~~~Gg~~~~~~-------g~~~G~~~e~~p~~~i~~t 69 (140) .+|+++|+|+|||++||+|||||+++++||.+.. +.+++++||+|++.+ ....|+|++++||++|+|+ T Consensus 10 ~~i~i~r~i~Ap~e~Vw~a~tdpe~l~~W~~p~~~~~~~~~~d~~~GG~~~~~~~~~~g~~~~~~g~v~ei~p~~rl~~t 89 (178) T 1xfs_A 10 LDLMLKRELAVPVNLVWRGLTEPELLKKWFVPKPWSISDCRVDLRPGGEFYTVMQDPEGNKFPNSGCFLEVTDEKRLIWT 89 (178) T ss_dssp TEEEEEEEESSCHHHHHHHHHCHHHHTTTSSCTTCEEEEEEECCSTTCEEEEEEECTTCCEEEEEEEEEEEETTTEEEEE T ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHCCCCCCCCCCCEEEECCEECCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEE T ss_conf 18999999679999999997598897255668995125632110249638997747999776778999981686699999 Q ss_pred EECCC-------------CCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHC Q ss_conf 81378-------------8889850899998633899469999975877553321013453664155889999889851 Q T0594 70 WKFRD-------------WNECDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVIL 135 (140) Q Consensus 70 w~~~~-------------~~~~~~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~ 135 (140) |.+.+ ......+.++++|.+ .+++|+|+++|.+....+ .......+++.||.. .|++|++++ T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~-~~~gT~lt~~~~~~~~~~--~~~~~~~~~~~GW~~-~l~~L~~~l 164 (178) T 1xfs_A 90 SALVKNYRPAVPATTSDKECAHIVMTAVIELQP-TSSGTRYTACAMHNTPGQ--RKLHEEMGFHEGWGT-TITQLEELL 164 (178) T ss_dssp SSEEGGGEECCC-----------CCEEEEEEEE-CSSSEEEEEEEECSSHHH--HHHHHTTTHHHHHHH-HHHHHHHHH T ss_pred EEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEE-CCCCEEEEEEEECCCHHH--HHHHHHHHHHHHHHH-HHHHHHHHH T ss_conf 840566575655555566778875799999997-399389999997478314--889998779989999-999999999 No 10 >1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, bacillus halodurans protein BH1534; NMR {Bacillus halodurans c-125} SCOP: d.129.3.5 Probab=99.89 E-value=2.3e-22 Score=153.97 Aligned_cols=126 Identities=19% Similarity=0.287 Sum_probs=105.3 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEC--CCEEEEEEEEEECCCEEEEEEECCCCCCCC Q ss_conf 078999887799899999733976888861899763234568337870--321102899976791899998137888898 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLF--SGSILGEFTEITKPHKIVEKWKFRDWNECD 79 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~--~g~~~G~~~e~~p~~~i~~tw~~~~~~~~~ 79 (140) .+|+++++|+|||++||+|||+|+.+++||.+ ...++.+|++|.+. ++.+.|+|++++||++|+|+|... T Consensus 5 ~~i~~~~~i~Appe~Vw~alt~p~~~~~W~~~--~~~~~~~G~~~~~~~~~g~~~~~v~~~~p~~~i~~~~~~~------ 76 (146) T 1xn5_A 5 PDIKKEVRFNAPIEKVWEAVSTSEGLAFWFME--NDLKAETGHHFHLQSPFGPSPCQVTDVERPIKLSFTWDTD------ 76 (146) T ss_dssp CCEEEEEEESSCHHHHHHHTTSHHHHHTTSCC--BCCCSCTTCEEEEECSSCEEEEEEEEEETTTEEEEEETTT------ T ss_pred CEEEEEEEECCCHHHHHHHHCCHHHHHHHHCC--CCCCCCCCEEEEEECCCCCCCEEEEEEECCCEEEEEECCC------ T ss_conf 74999999779999999998196677653424--6654446528986436665567999982693899998589------ Q ss_pred CEEEEEEEEECCCCCEEEEEEECCCCCCCC------CCCHHHHHHHHCCHHHHHHHHHHHHCC Q ss_conf 508999986338994699999758775533------210134536641558899998898517 Q T0594 80 YSTVTVEFISVKENHTKLKLTHNNIPASNK------YNEGGVLERCKNGWTQNFLHNIEVILG 136 (140) Q Consensus 80 ~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~------~~~~~~~e~~~~GW~~~~~~~lk~~~g 136 (140) .+.|+++|.+ .+++|+|+++|+|++..+. .......+++++||...++++||+++- T Consensus 77 ~~~v~~~l~~-~~~gT~lt~t~~g~~~~~~~~~~~~~~~~~~~~~~~~GW~~~l~~~Lk~~vE 138 (146) T 1xn5_A 77 GWSVTFHLKE-EENGTIFTIVHSGWKQGDTKVEKAGAESAVVHERMDRGWHDLVNERLRQIVE 138 (146) T ss_dssp TEEEEEEEEE-CSSSEEEEEEEECCCSTTCBCSSSSSBHHHHHHHHHHHHHHHTTTTTHHHHC T ss_pred CCEEEEEEEE-CCCCEEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9489999998-4997899999936776413444202210368888866499999999999973 No 11 >1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A Probab=99.88 E-value=2.1e-22 Score=154.20 Aligned_cols=131 Identities=15% Similarity=0.307 Sum_probs=107.7 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCC-------CCCCCCCCCCEEEECC--C--EEEEEEEEEECCCEEEEEEE Q ss_conf 78999887799899999733976888861899-------7632345683378703--2--11028999767918999981 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGS-------LAEVDLKVGGKFSLFS--G--SILGEFTEITKPHKIVEKWK 71 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~-------~~~~d~~~Gg~~~~~~--g--~~~G~~~e~~p~~~i~~tw~ 71 (140) ++..+++|+||+++||+|||+ .+.+||.+. ...+++++||+|.+.+ | ...|+|++++||+||+|+|. T Consensus 5 ~v~~s~~i~Ap~e~Vf~a~te--~~~~Ww~~~~~~~~~~~~~~~~~~gG~~~~~~~dg~~~~~g~v~ev~p~~rl~~tw~ 82 (155) T 1zxf_A 5 FVRHSVTVKADRKTAFKTFLE--GFPEWWPNNFRTTKVGAPLGVDKKGGRWYEIDEQGEEHTFGLIRKVDEPDTLVIGWR 82 (155) T ss_dssp CEEEEEEESSHHHHHHHHHTT--CSSSSSSGGGSTTTTCSSCEEETTTTEEECCCTTTSCCCCEEEEEEETTTEEEEECC T ss_pred EEEEEEEEECCHHHHHHHHHH--HHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEEEEEEECCCEEEEEEE T ss_conf 599999996999999999875--478665999866400347762178724999813420365379999956848999971 Q ss_pred CCCC---CCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC Q ss_conf 3788---8898508999986338994699999758775533210134536641558899998898517 Q T0594 72 FRDW---NECDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVILG 136 (140) Q Consensus 72 ~~~~---~~~~~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~g 136 (140) +... ++...+.|+++|++..+++|+|+|+|+|++..+........++|..||.. +|++|++++. T Consensus 83 ~~~~~~~~~~~~~~v~~~~~~~~~~~T~v~l~h~g~~~~~~~~~~~~~~~~~~GW~~-~L~~L~~~le 149 (155) T 1zxf_A 83 LNGFGRIDPDNSSEFTVTFVADGQKKTRVDVEHTHFDRMGTKHAKRVRNGMDKGWPT-ILQSFQDKID 149 (155) T ss_dssp CSSSSSCCCSSCCCEEEEEEEETTTEEEEEEEECSSTTSCHHHHHHHHHHHTTTHHH-HHHHHHHHHH T ss_pred CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHH T ss_conf 177656554677506999985389967999999135766615689998667554999-9999999860 No 12 >2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, protein structure initiative; HET: MSE; 1.45A {Enterococcus faecalis V583} SCOP: d.129.3.5 Probab=99.88 E-value=1.6e-21 Score=148.90 Aligned_cols=121 Identities=13% Similarity=0.214 Sum_probs=100.4 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEC--CCEEEEEEEEEECCCEEEEEEECCCCCCCC Q ss_conf 078999887799899999733976888861899763234568337870--321102899976791899998137888898 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLF--SGSILGEFTEITKPHKIVEKWKFRDWNECD 79 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~--~g~~~G~~~e~~p~~~i~~tw~~~~~~~~~ 79 (140) ..|.++|.|+||||+||+|||+|+.+++||.+ ....|+++||.|++. ++...|+|++++||++|+|+|. T Consensus 36 ~~v~~eR~i~A~pE~VW~AlTdpe~l~~Wf~~-~~~~d~~~GG~~~f~~~~~~~~~~V~e~epp~rL~~tW~-------- 106 (184) T 2nn5_A 36 IYFGTERAISASPQTIWRYLTETDKLKQWFPE-LEIGELGVNGFWRFILPDFEETMPFTDYAEEKYLGVTWD-------- 106 (184) T ss_dssp EEEEEEEEESSCHHHHHHHHHCHHHHHHHCTT-EEEEECSTTCEEEEEETTEEEEEEEEEEETTTEEEEEET-------- T ss_pred EEEEEEEECCCCHHHHHHHHCCHHHHHHCCCC-CCCCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEEC-------- T ss_conf 89999995189999999997294789861898-776566668689998069973589999816978999988-------- Q ss_pred CEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCC Q ss_conf 5089999863389946999997587755332101345366415588999988985178 Q T0594 80 YSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVILGY 137 (140) Q Consensus 80 ~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~g~ 137 (140) .+.|+++|.+.++++|+|+|+|++.+.... ....+..||.. +|++|++++.- T Consensus 107 ~~~v~feL~~~~~~~T~L~l~h~~~~~~~~-----~~~~~~aGW~~-~L~~L~~~leg 158 (184) T 2nn5_A 107 TGIIYFDLKEQAPHQTLLVFSESLPENFTT-----PRHKDIAGWSI-VLNRLKQVVET 158 (184) T ss_dssp TEEEEEEEEEEETTEEEEEEEEEECTTCSS-----CHHHHHHHHHH-HHHHHHHHHHC T ss_pred CCCEEEEEEECCCCCEEEEEEEECCCCCCC-----CCCCCCCCHHH-HHHHHHHHHCC T ss_conf 981899999748994999999955876532-----35233289999-99999999748 No 13 >3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} PDB: 2b79_A Probab=99.15 E-value=1e-09 Score=77.37 Aligned_cols=126 Identities=10% Similarity=0.065 Sum_probs=90.0 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCC----CCCCCCCCCEEEECC---CEEEEEEEEEECCCEEEEEEECCC Q ss_conf 0789998877998999997339768888618997----632345683378703---211028999767918999981378 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSL----AEVDLKVGGKFSLFS---GSILGEFTEITKPHKIVEKWKFRD 74 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~----~~~d~~~Gg~~~~~~---g~~~G~~~e~~p~~~i~~tw~~~~ 74 (140) +.++.+..|+||+++||+.++|++.+.+|.. .. ...+..+|.++.+.. ..+.-++++++|++++.+....+. T Consensus 18 ~~~s~si~I~Ap~e~Vw~~l~D~~~~p~W~p-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~p~~~~~~~~~~~~ 96 (155) T 3ijt_A 18 MKFSFELAVNTKKEDAWTYYSQVNQWFVWEG-DLEQISLEGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPF 96 (155) T ss_dssp EEEEEEEEESSCHHHHHHHHHCGGGGGGTST-TEEEEEESSSSSTTCEEEEEETTSCCEEEEECCCBTTTEEEEEEEETT T ss_pred EEEEEEEEECCCHHHHHHHHHHHCCHHHHCC-CCEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEECCCC T ss_conf 5899999987999999999873353655067-750578625224664999996899738999999728959999965787 Q ss_pred CCCCCCEEEEEEEEECCCCCEEEEEEE--CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHC Q ss_conf 888985089999863389946999997--5877553321013453664155889999889851 Q T0594 75 WNECDYSTVTVEFISVKENHTKLKLTH--NNIPASNKYNEGGVLERCKNGWTQNFLHNIEVIL 135 (140) Q Consensus 75 ~~~~~~s~v~~~~~~~~~g~T~l~l~~--~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~ 135 (140) ......+.+.+..+|+|+++... +|... ..........++.++++. +++||++. T Consensus 97 ----~~~~~~~~~~~~~~g~t~v~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~-l~~LK~~a 152 (155) T 3ijt_A 97 ----GNVLFEHEILENPDGTISLRHSVSLTDSDT--TEEALAFLKQIFADVPES-VGKLKQIL 152 (155) T ss_dssp ----EEEEEEEEEEECTTSCEEEEEEEEESCCSC--CHHHHHHHHHHHTTHHHH-HHHHHHHH T ss_pred ----CEEEEEEEEEECCCCCEEEEEEEEEECCCH--HHHHHHHHHHHHHHHHHH-HHHHHHHH T ss_conf ----235789999855899448999999827870--677999999999889999-99999996 No 14 >3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A Probab=98.83 E-value=1.8e-07 Score=63.80 Aligned_cols=128 Identities=13% Similarity=-0.013 Sum_probs=78.2 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEE--EEC--C----CEEEEEEEEEECCCEEEEEEECCC Q ss_conf 78999887799899999733976888861899763234568337--870--3----211028999767918999981378 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKF--SLF--S----GSILGEFTEITKPHKIVEKWKFRD 74 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~--~~~--~----g~~~G~~~e~~p~~~i~~tw~~~~ 74 (140) .|+-+.+|+||+++||+.++|++.+.+|.. .........++.. ... . .....++++.+|+++|++.-. . T Consensus 5 ~i~~si~I~aP~~~Vw~~l~D~~~~~~w~p-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~~--~ 81 (155) T 3ggn_A 5 VVRDAVTIGKPAEQLYAVWRDLPGLPLLMT-HLRSVEVLDDKRSRWTVEAPAPLGTVSWEAELTADEPGKRIAWRSL--P 81 (155) T ss_dssp EEEEEEEESSCHHHHHHHHHCGGGHHHHST-TCCEEEECSSSEEEEEEECCTTTCEEEEEEEEEEEETTTEEEEEEC--T T ss_pred EEEEEEEECCCHHHHHHHHHCHHHHHHHCC-CCCEEEEECCCCCEEEEEECCEEEEEEEEEEEEEECCCCEEEEEEE--C T ss_conf 999999989999999999869767665266-7410576336772378972010200100179998328946789960--3 Q ss_pred CCC-CCCEEEEEEEEECCCCCEEEEEEECCCCCC---CCCCCHHHHHHHHCCHHHHHHHHHHHHC Q ss_conf 888-985089999863389946999997587755---3321013453664155889999889851 Q T0594 75 WNE-CDYSTVTVEFISVKENHTKLKLTHNNIPAS---NKYNEGGVLERCKNGWTQNFLHNIEVIL 135 (140) Q Consensus 75 ~~~-~~~s~v~~~~~~~~~g~T~l~l~~~g~~~~---~~~~~~~~~e~~~~GW~~~~~~~lk~~~ 135 (140) .+. ......++++. +.+++|+++++.+.-+.. ...........++..+++ .|++||+++ T Consensus 82 g~~~~~~g~~~~~~~-~~~~~t~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~L~~lK~~~ 144 (155) T 3ggn_A 82 GARIENSGEVLFRPA-PGARGTEVVVRLTYRPPGGSAGAVIARMFNQEPSQQLRD-DLMRFKREQ 144 (155) T ss_dssp TCSSCEEEEEEEEEC-SSSSCEEEEEEEEEC----------------CHHHHHHH-HHHHHHHHH T ss_pred CCCCCEEEEEEEEEE-CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH T ss_conf 775211579999991-368836999999887274108999999999999999999-999999997 No 15 >2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, protein structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10 Probab=98.76 E-value=3e-07 Score=62.50 Aligned_cols=132 Identities=15% Similarity=0.165 Sum_probs=80.3 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC---EEEECC------CEEEEEEEEEECCCEEEEEEEC Q ss_conf 0789998877998999997339768888618997632345683---378703------2110289997679189999813 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGG---KFSLFS------GSILGEFTEITKPHKIVEKWKF 72 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg---~~~~~~------g~~~G~~~e~~p~~~i~~tw~~ 72 (140) +.++-+.+|+|||++||+.++|++.+..|+. .........++ ...... ......+.+.+|++++++.... T Consensus 13 ~k~e~si~I~ap~e~Vw~~l~D~~~~~~w~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (157) T 2ns9_A 13 VRYEGSFEVSKTPEEVFEFLTDPKRFSRAFP-GFKSVEVEDGSFTIELRLSLGPLRGDARVRASFEDLEKPSKATVKGSG 91 (157) T ss_dssp EEEEEEEEESSCHHHHHHHHTCHHHHGGGST-TEEEEEEETTEEEEEEEEESSSSEEEEEEEEEEEEEETTTEEEEEEEE T ss_pred EEEEEEEEECCCHHHHHHHHHCHHHHHCCCC-CEEEEEECCCCCCEEEEEEEEEEEEEEEEEEEEEECCCCCEEEEEECC T ss_conf 9998799968999999998739655531698-518865247764207999862251025405899852666404676022 Q ss_pred CCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCC--CCCCCCHHHHHHHHCCHHHHHHHHHHHHCC Q ss_conf 7888898508999986338994699999758775--533210134536641558899998898517 Q T0594 73 RDWNECDYSTVTVEFISVKENHTKLKLTHNNIPA--SNKYNEGGVLERCKNGWTQNFLHNIEVILG 136 (140) Q Consensus 73 ~~~~~~~~s~v~~~~~~~~~g~T~l~l~~~g~~~--~~~~~~~~~~e~~~~GW~~~~~~~lk~~~g 136 (140) ............+.+. +.+++|++++++..-.. .............+...+ .++++||+.++ T Consensus 92 ~~~~~~~~~~~~~~l~-~~~~gt~v~~~~~~~~~g~l~~l~~~~v~~~~~~~~~-~~l~~Lk~~le 155 (157) T 2ns9_A 92 RGAGSTLDFTLRFAVE-PSGGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMIN-DVISGVKRELG 155 (157) T ss_dssp ECSSEEEEEEEEEEEE-EETTEEEEEEEEEEEEEEGGGGSCHHHHHHHHHHHHH-HHHHHHHHHHT T ss_pred CCCCCCCEEEEEEEEE-ECCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH T ss_conf 3567532038999984-2699749999999996873898769999999999999-99999999875 No 16 >3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovarkonkukian} PDB: 3cnw_A Probab=98.71 E-value=3.8e-07 Score=61.85 Aligned_cols=128 Identities=9% Similarity=0.105 Sum_probs=78.6 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEC---C-CEEEEEEEEE-ECCCEEEEEEECCCCCC Q ss_conf 78999887799899999733976888861899763234568337870---3-2110289997-67918999981378888 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLF---S-GSILGEFTEI-TKPHKIVEKWKFRDWNE 77 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~---~-g~~~G~~~e~-~p~~~i~~tw~~~~~~~ 77 (140) .++.+.+|+||||+||++++|.+.+.+|+. .....+...+|..+.. . +.+.-+++.. ++++++.|+-...+.+- T Consensus 3 ~~~~s~~I~Ap~e~VW~~l~D~~~~~~W~p-~v~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (146) T 3f08_A 3 HTTTSMEIFGSTEQVWQLIGGFNSLPDWLP-YIPSSKLTEGGRVRHLANPDGETIIERLEVFNDKERYYTYSIMNAPFPV 81 (146) T ss_dssp EEEEEEEESSCHHHHHHHHCSTTCHHHHCT-TCCEEEEEGGGTEEEEECTTSCEEEEEEEEEETTTTEEEEEEEECSSSE T ss_pred CEEEEEEEECCHHHHHHHHHCCCCCCCCCC-CEEEEEEECCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEEECCCCC T ss_conf 389999995899999997657176001058-7888988459868999960896557999998168863999999558550 Q ss_pred CCCEEEEEEEEECC-CCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHC Q ss_conf 98508999986338-99469999975877553321013453664155889999889851 Q T0594 78 CDYSTVTVEFISVK-ENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVIL 135 (140) Q Consensus 78 ~~~s~v~~~~~~~~-~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~ 135 (140) . .-.-++++.+.. +++|+|+.+....|. ..........++.-|+. -|++||+.| T Consensus 82 ~-~~~~~~~l~p~~~g~~T~vt~~~~f~p~--~~~~~~~~~~~~~~~~~-~L~~L~~~f 136 (146) T 3f08_A 82 T-NYLSTIQVKEGTESNTSLVEWSGTFTPV--AVSDEEAINLVHGIYSD-GLKALQHAF 136 (146) T ss_dssp E-EEEEEEEEEECSSTTCEEEEEEEEEEES--SSCHHHHHHHHHHHHHH-HHHHHHHHT T ss_pred E-EEEEEEEEEECCCCCCEEEEEEEEEEEC--CCCHHHHHHHHHHHHHH-HHHHHHHHH T ss_conf 8-7750799996168994899999999618--99989999999999999-999999875 No 17 >2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI- 2, protein structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus HTA426} SCOP: d.129.3.10 Probab=98.46 E-value=5.3e-06 Score=54.93 Aligned_cols=137 Identities=12% Similarity=0.071 Sum_probs=79.1 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEC----CC----E--EEEEEEEEECCCEEEEEEE Q ss_conf 078999887799899999733976888861899763234568337870----32----1--1028999767918999981 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLF----SG----S--ILGEFTEITKPHKIVEKWK 71 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~----~g----~--~~G~~~e~~p~~~i~~tw~ 71 (140) +.+.=+.+++|||++||++++||+.++.+.. .....+..-.+.|+.. -+ . ...++.+..+++.+...+. T Consensus 3 m~~sg~~~v~a~~e~Vw~~l~D~e~~a~ciP-g~~~~e~~~d~~~~~~~~v~~g~i~~~~~~~~~~~~~~~~~~~~~~~~ 81 (162) T 2pcs_A 3 LNGNGSIELKGTVEEVWSKLMDPSILSKCIM-GCKSLELIGEDKYKADLQIGIAAVKGKYDAIIEVTDIKPPYHYKLLVN 81 (162) T ss_dssp CEEEEEEEEESCHHHHHHHHTCHHHHHHHST-TEEEEEEEETTEEEEEEEECCGGGCEEEEEEEEEEEEETTTEEEEEEE T ss_pred EECCCEEEECCCHHHHHHHHCCHHHHHHHCC-CCEEEEECCCCEEEEEEEEEEEEEEEEEEEEEEEEECCCCCEEEEEEC T ss_conf 7536569958999999999749999872297-804679859987999999977218789999999940588530899603 Q ss_pred CCCCCCCCCEEEEEEEEECCCCCEEEEEEECC-CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCC Q ss_conf 37888898508999986338994699999758-775533210134536641558899998898517899 Q T0594 72 FRDWNECDYSTVTVEFISVKENHTKLKLTHNN-IPASNKYNEGGVLERCKNGWTQNFLHNIEVILGYPK 139 (140) Q Consensus 72 ~~~~~~~~~s~v~~~~~~~~~g~T~l~l~~~g-~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~g~~~ 139 (140) ..+..........+.+++..+++|+|++.-.- +...-........+..-..=-+.|+.+|++.++-++ T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~T~v~~~~~~~~~g~la~~g~~~i~~~a~~l~~~f~~~l~~~l~~~~ 150 (162) T 2pcs_A 82 GEGGPGFVNAEGVIDLTPINDECTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKEIAKSK 150 (162) T ss_dssp EEETTEEEEEEEEEEEEESSSSEEEEEEEEEEEEESGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHC- T ss_pred CCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 335666432114799840589837999999999698699875899999999999999999999865688 No 18 >2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8 Probab=98.32 E-value=2.9e-06 Score=56.56 Aligned_cols=123 Identities=12% Similarity=0.020 Sum_probs=74.0 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEC---CCEEEEEEEEEECCCEEEEEEECCCCCCCC Q ss_conf 78999887799899999733976888861899763234568337870---321102899976791899998137888898 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLF---SGSILGEFTEITKPHKIVEKWKFRDWNECD 79 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~---~g~~~G~~~e~~p~~~i~~tw~~~~~~~~~ 79 (140) +-+++.+|++|+++||+.|+||+.+.+|+. .........++.+... .|.+.-+|++-.|...|.+.-.. +++. T Consensus 28 ~~~v~vtI~rP~~eVy~f~~DpenlP~W~~-~l~~v~~~d~~~w~~~~gp~g~~~~~i~ed~~~~~i~w~~~~---~~~~ 103 (156) T 2qpv_A 28 SRIIHLSVEKPWAEVYDFAANPGNMPRWAA-GLAGGLEADGEDWIAKGGPLGEVRVNFAPHNEFGVIDHVVTL---PDGL 103 (156) T ss_dssp EEEEEEEESSCHHHHHHHHHCGGGGGGTCG-GGTTCCEEETTEEEEECSSSCEEEEEECCCCSSCBCCEEEEC---TTSC T ss_pred CEEEEEEECCCHHHHHHHHHCHHHHHHHHH-HCCEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEEEEEC---CCCC T ss_conf 269999976999999999879555178986-214046527774798017986289999976989599899545---9997 Q ss_pred CEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHC Q ss_conf 50899998633899469999975877553321013453664155889999889851 Q T0594 80 YSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVIL 135 (140) Q Consensus 80 ~s~v~~~~~~~~~g~T~l~l~~~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~ 135 (140) ...+.+...+ .+.+|+|+++---.|... . ...+..+. |-+.=|.+||+++ T Consensus 104 ~g~v~fr~~p-~G~GTeV~~t~~~~pg~~--~--~~~~~~~~-~v~~dL~rlK~ll 153 (156) T 2qpv_A 104 KVYNALRVTP-NGSGTEVSFTLLRLEGMT--D--EDFEQDAS-AITADLEMLKSLL 153 (156) T ss_dssp EEEEEEEEEE-ETTEEEEEEEEECCTTCC--H--HHHHHHHH-HHHHHHHHHHHHH T ss_pred EEEEEEEECC-CCCCEEEEEEEECCCCCC--H--HHHHHHHH-HHHHHHHHHHHHH T ss_conf 8999999885-999489999986499985--7--88898999-9999999999985 No 19 >2kf2_A Putative polyketide cyclase; aromatase/cyclase, ARO/CYC, structural genomics, PSI-2, protein structure initiative; NMR {Streptomyces coelicolor A3} Probab=98.32 E-value=1.5e-05 Score=52.14 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=73.4 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCC------CCCCCCEEEECC---CEEE--EEEEEEECCCEEEEEEE Q ss_conf 789998877998999997339768888618997632------345683378703---2110--28999767918999981 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEV------DLKVGGKFSLFS---GSIL--GEFTEITKPHKIVEKWK 71 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~------d~~~Gg~~~~~~---g~~~--G~~~e~~p~~~i~~tw~ 71 (140) .++-+++|+|||+.||+.++|++.+.+|+. ..... ....|..+.... +... -..+.++|+.++.+... T Consensus 4 h~e~si~I~Ap~e~Vw~~l~D~~~~p~w~p-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~r~~~~~~ 82 (167) T 2kf2_A 4 HTDNEITIAAPMELVWTMTNDIEKWPGLFS-EYASVEVLGRDDDKVTFRLTMHPDADGKVWSWVSERVADPVTRTVRAQR 82 (167) T ss_dssp EEEEEEEECSCHHHHHHHHHCGGGGGGTCT-TCSEEEEEEEETTEEEEEEECCCCTTSCCCEEEEEEEEETTTTEEEEEE T ss_pred EEEEEEEECCCHHHHHHHHHCHHHHHHHCC-CCEEEEEEECCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEE T ss_conf 788899968999999999978666776566-7359999953799657999999655757874238999748947999995 Q ss_pred CCCCCCCCCEEEEEEEEECCCCCEEEEEEECC--CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHC Q ss_conf 37888898508999986338994699999758--77553321013453664155889999889851 Q T0594 72 FRDWNECDYSTVTVEFISVKENHTKLKLTHNN--IPASNKYNEGGVLERCKNGWTQNFLHNIEVIL 135 (140) Q Consensus 72 ~~~~~~~~~s~v~~~~~~~~~g~T~l~l~~~g--~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~ 135 (140) ....+. ....-.+.|.+ .+++|+|+++++- -+.... ....+...+...=.. .|++||+.. T Consensus 83 ~~~~~~-~~~~g~w~l~~-~~~GT~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~L~~lk~~~ 144 (167) T 2kf2_A 83 VETGPF-QYMNIVWEYAE-TAEGTVMRWTQDFAMKPDAPV-DDAWMTDNINRNSRT-QMALIRDRI 144 (167) T ss_dssp SSCSSE-EEEEEEEEEEE-ETTEEEEEEEEEEEECTTCCS-CSHHHHHHHHHHHHH-HHHHHHHHH T ss_pred ECCCCC-CCEEEEEEEEE-CCCCEEEEEEEEEEECCCCHH-HHHHHHHHHHHHHHH-HHHHHHHHH T ss_conf 048755-45189999981-589769999999997698166-799999999888999-999999999 No 20 >2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus HB8} SCOP: d.129.3.6 Probab=98.27 E-value=3.3e-05 Score=50.12 Aligned_cols=126 Identities=15% Similarity=0.067 Sum_probs=72.8 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCC--CCCC-C-EEEE----CCC--EEEEEEEEEECCCEEEEEEEC Q ss_conf 7899988779989999973397688886189976323--4568-3-3787----032--110289997679189999813 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVD--LKVG-G-KFSL----FSG--SILGEFTEITKPHKIVEKWKF 72 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d--~~~G-g-~~~~----~~g--~~~G~~~e~~p~~~i~~tw~~ 72 (140) +++.++.|+||+++||+.++|++...+|+. ...... -..+ + .... ... ....++++..|+.+|.+.-.. T Consensus 3 ~i~~~~~I~ap~~~V~~~l~d~~~~~~w~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 81 (147) T 2d4r_A 3 EVRAERYIPAPPERVYRLAKDLEGLKPYLK-EVESLEVVAREGARTRSRWVAVAMGKKVRWLEEEEWDDENLRNRFFSPE 81 (147) T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHGGGCT-TEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEE T ss_pred EEEEEEEECCCHHHHHHHHHCHHHHHHHCC-CCEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEECCCCEEEEEECC T ss_conf 699999989999999999979887776455-7189999970799799999999567078788999995485369987427 Q ss_pred CCCCCCCCEEEEEEEEECCCCCEEEEEEECC---CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH Q ss_conf 7888898508999986338994699999758---7755332101345366415588999988985 Q T0594 73 RDWNECDYSTVTVEFISVKENHTKLKLTHNN---IPASNKYNEGGVLERCKNGWTQNFLHNIEVI 134 (140) Q Consensus 73 ~~~~~~~~s~v~~~~~~~~~g~T~l~l~~~g---~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~ 134 (140) .+ .....-.+.|.+ .+++|+++++.+- .+..............+.+.+. .+++||+- T Consensus 82 --~~-~~~~~g~~~l~~-~~~gT~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lk~r 141 (147) T 2d4r_A 82 --GD-FDRYEGTWVFLP-EGEGTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVES-LLKGLEER 141 (147) T ss_dssp --ES-CSEEEEEEEEEE-CSSSEEEEEEEEEECCCTTTTTTTHHHHHHHHHHHHHH-HHHHHHHH T ss_pred --CC-CCEEEEEEEEEE-CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHH T ss_conf --75-002489999999-89985899999999747607789999999999999999-99999999 No 21 >2rer_A Multifunctional cyclase-dehydratase-3-O-methyl transferase TCMN; aromatase, polyketide, helix-GRIP, anticancer, antibiotic; 1.90A {Streptomyces glaucescens} SCOP: d.129.3.6 PDB: 2res_A 2rez_A Probab=98.14 E-value=6e-05 Score=48.56 Aligned_cols=128 Identities=10% Similarity=0.135 Sum_probs=69.3 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCC--CCCC----CEEEECC---C---EEEEEEEEEECCCEEEEEE Q ss_conf 7899988779989999973397688886189976323--4568----3378703---2---1102899976791899998 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVD--LKVG----GKFSLFS---G---SILGEFTEITKPHKIVEKW 70 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d--~~~G----g~~~~~~---g---~~~G~~~e~~p~~~i~~tw 70 (140) .+.-+..|+|||++||+.++|++.+..|+. .....+ .+.+ ..+.... + ....++....|+++|.+. T Consensus 7 ~~e~si~I~Ap~~~Vw~~l~D~~~~p~~~p-~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~i~~~- 84 (173) T 2rer_A 7 RTDNSIVVNAPFELVWDVTNDIEAWPELFS-EYAEAEILRQDGDGFDFRLKTRPDANGRVWEWVSHRVPDKGSRTVRAH- 84 (173) T ss_dssp EEEEEEEESSCHHHHHHHHTCGGGHHHHCS-SEEEEEEEECCSSCEEEEEEECCCTTSCCCEEEEEEEEEGGGTEEEEE- T ss_pred EEEEEEEECCCHHHHHHHHHCHHHHHHHCC-CCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEE- T ss_conf 516689978999999999977676767470-417999985169943999999974477067789999981886399999- Q ss_pred ECCCCCCCCCEEEEEEEEECCCCCEEEEEEECC-CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHC Q ss_conf 137888898508999986338994699999758-77553321013453664155889999889851 Q T0594 71 KFRDWNECDYSTVTVEFISVKENHTKLKLTHNN-IPASNKYNEGGVLERCKNGWTQNFLHNIEVIL 135 (140) Q Consensus 71 ~~~~~~~~~~s~v~~~~~~~~~g~T~l~l~~~g-~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~ 135 (140) .....+ -......++|.+. +++|+++++++- +..........+...++..=. ..+.+||+.+ T Consensus 85 ~~~~~~-~~~~~g~w~~~~~-~~gt~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~L~~lk~~~ 147 (173) T 2rer_A 85 RVETGP-FAYMNLHWTYRAV-AGGTEMRWVQEFDMKPGAPFDNAHMTAHLNTTTR-ANMERIKKII 147 (173) T ss_dssp ESSCTT-EEEEEEEEEEEEE-TTEEEEEEEEEEEECTTCSSCHHHHHHHHHHHHH-HHHHHHHHHH T ss_pred ECCCCC-CCCCEEEEEEEEC-CCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHH-HHHHHHHHHH T ss_conf 405887-6650799999987-9964999999999778864308899999976789-9999999999 No 22 >1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A* Probab=97.21 E-value=0.0053 Score=36.78 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=56.6 Q ss_pred EEEEEEEEECCCHHHHHHHH-CCHHHHHHHHCCCCC------CCCCCCCC--EEEECCCE----EEEEEEEEECC-CEEE Q ss_conf 07899988779989999973-397688886189976------32345683--37870321----10289997679-1899 Q T0594 2 MSFEITEEYYVPPEVLFNAF-TDAYTLTRLSRGSLA------EVDLKVGG--KFSLFSGS----ILGEFTEITKP-HKIV 67 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~-t~pe~~~~W~~~~~~------~~d~~~Gg--~~~~~~g~----~~G~~~e~~p~-~~i~ 67 (140) ++++.++++++||+++|+|| .+...+..|. |... +.|-.+|. .+.+..+. +.=++..+++. +.+. T Consensus 3 ~~~~~E~~~~v~a~k~~ka~~~d~~~l~~~~-P~~i~s~e~~eGdg~~Gsir~~~~~~g~~~~~~KErie~iD~~~~~~~ 81 (157) T 1tw0_A 3 FVFRDETSSSVAPAKLYKALTKDSDTIAQKI-DGPIQSIELVEGNGGVGTIKKITANEGDKTSFVLQKVDAIDEANLGYD 81 (157) T ss_dssp EEEEEEEEESSCHHHHHHHHHHTGGGGGGGS-CSSEEEEEEEESSSSTTCEEEEEEEETTEEEEEEEEEEEEETTTTEEE T ss_pred EEEEEEEECCCCHHHHHHHHHCCHHHCCCCC-CCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEE T ss_conf 4888767616898998884430640176107-002764068637999685999997368765401899999846345899 Q ss_pred EEEECCCCC-CCCCE--EEEEEEEECCCCCEEEEEEE Q ss_conf 998137888-89850--89999863389946999997 Q T0594 68 EKWKFRDWN-ECDYS--TVTVEFISVKENHTKLKLTH 101 (140) Q Consensus 68 ~tw~~~~~~-~~~~s--~v~~~~~~~~~g~T~l~l~~ 101 (140) |+- .+++. ..... ..++.+.+..+|+|.++.+- T Consensus 82 y~v-iEGd~l~~~~~~~~~~~~~~~~~~g~svvkwt~ 117 (157) T 1tw0_A 82 YSI-VGGTGLPESLEKLSFETKVVAGSGGGSISKVTL 117 (157) T ss_dssp EEE-EECTTSCTTEEEEEEEEEEEECSSSSEEEEEEE T ss_pred EEE-EECCCCCCCEEEEEEEEEEEECCCCCEEEEEEE T ss_conf 999-804546532589999999961699962899999 No 23 >3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid; HET: A8S; 2.05A {Arabidopsis thaliana} Probab=97.17 E-value=0.0098 Score=35.15 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=46.4 Q ss_pred EEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCC------CCCCCE--EEECCC----EEEEEEEEEECCC-EEEEEEE Q ss_conf 99988779989999973397688886189976323------456833--787032----1102899976791-8999981 Q T0594 5 EITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVD------LKVGGK--FSLFSG----SILGEFTEITKPH-KIVEKWK 71 (140) Q Consensus 5 ~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d------~~~Gg~--~~~~~g----~~~G~~~e~~p~~-~i~~tw~ 71 (140) .+.++|+||+++||..+.|=..+.+|.. .+..-. ..+|.. +.+..| .+.-+...+++.+ .+.|+-- T Consensus 57 ~~~~~I~AP~~~VW~~V~dF~~~~~W~P-~V~sc~l~~g~~~~vGsvR~v~l~sG~pa~~i~ErL~~iDd~~~~~sY~Ii 135 (208) T 3jrs_A 57 LLAQRIHAPPETVWSVVRRFDRPQIYKH-FIKSCNVSEDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSIT 135 (208) T ss_dssp EEEEEESSCHHHHHHHHTCTTCGGGTCT-TEEEEECCTTCCCSTTCEEEEEECTTSSCCEEEEEEEEEETTTTEEEEEEE T ss_pred EEEEEECCCHHHHHHHHHCCCCHHHCCC-CCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEE T ss_conf 3688844999999888755599888787-564699874888874039999950577846899887645542588999996 Q ss_pred CCCCCC-CCCEEEEEEEEE Q ss_conf 378888-985089999863 Q T0594 72 FRDWNE-CDYSTVTVEFIS 89 (140) Q Consensus 72 ~~~~~~-~~~s~v~~~~~~ 89 (140) -.+.+- ...|++++.-.. T Consensus 136 egdlpv~~Y~Sti~V~~~~ 154 (208) T 3jrs_A 136 GGEHRLRNYKSVTTVHRFE 154 (208) T ss_dssp ESSSSCTTCEEEEEEEEEE T ss_pred CCCCCCCEEEEEEEEEECC T ss_conf 6886521158899998678 No 24 >3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, ABA, ABA sensor, drought tolerance, plant development, SEED dormancy; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3k90_A* 3jrq_B* 3kdj_A* Probab=96.67 E-value=0.031 Score=32.15 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=47.7 Q ss_pred EEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCC------CCCCCCEEE---ECCC----EEEEEEEEEEC-CCEEEEEE Q ss_conf 9998877998999997339768888618997632------345683378---7032----11028999767-91899998 Q T0594 5 EITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEV------DLKVGGKFS---LFSG----SILGEFTEITK-PHKIVEKW 70 (140) Q Consensus 5 ~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~------d~~~Gg~~~---~~~g----~~~G~~~e~~p-~~~i~~tw 70 (140) .+.++|+||+++||..+.|=..+.+|.. .+..- +..+| ..+ +..| .+.=+...+++ ++.+.|+- T Consensus 53 ~~~q~I~AP~~~VW~lV~dF~~~~~W~P-~V~sc~l~~G~~~~vG-svR~ltl~sG~pa~ts~ERL~~lDd~~~~lsY~I 130 (211) T 3k3k_A 53 LHAQRIHAPPELVWSIVRRFDKPQTYKH-FIKSCSVEQNFEMRVG-CTRDVIVISGLPANTSTERLDILDDERRVTGFSI 130 (211) T ss_dssp EEEEEESSCHHHHHHHHTCTTCGGGTCS-SEEEEECCTTCCCCTT-CEEEEEESSSSSCEEEEEEEEEEETTTTEEEEEE T ss_pred HEEEEECCCHHHHHHHHHCCCCHHHCCC-CCCEEEEECCCCCCCC-EEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEE T ss_conf 2136635999999888745499878787-3536898638888853-1899997447777468999976867688899999 Q ss_pred ECCCCC-CCCCEEEEEEEE Q ss_conf 137888-898508999986 Q T0594 71 KFRDWN-ECDYSTVTVEFI 88 (140) Q Consensus 71 ~~~~~~-~~~~s~v~~~~~ 88 (140) --.+.+ ....+++++.-. T Consensus 131 Iegdlpl~nY~StitV~p~ 149 (211) T 3k3k_A 131 IGGEHRLTNYKSVTTVHRF 149 (211) T ss_dssp EEETTGGGTCEEEEEEEEE T ss_pred ECCCCCCEEEEEEEEEEEE T ss_conf 6688761036899999852 No 25 >3kdh_A PYL2, putative uncharacterized protein AT2G26040; hormone receptor; 1.65A {Arabidopsis thaliana} PDB: 3kdi_A* Probab=96.52 E-value=0.039 Score=31.51 Aligned_cols=83 Identities=16% Similarity=0.098 Sum_probs=46.4 Q ss_pred EEEEEEECCCHHHHHHHHCCHHHHHHHHCCCC-----CCCCCCCCCE--EEECCC----EEEEEEEEEECCC-EEEEEEE Q ss_conf 89998877998999997339768888618997-----6323456833--787032----1102899976791-8999981 Q T0594 4 FEITEEYYVPPEVLFNAFTDAYTLTRLSRGSL-----AEVDLKVGGK--FSLFSG----SILGEFTEITKPH-KIVEKWK 71 (140) Q Consensus 4 i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~-----~~~d~~~Gg~--~~~~~g----~~~G~~~e~~p~~-~i~~tw~ 71 (140) =.+.++|+||+++||..+.|=..+.+|. |.. ...+..+|-. +.+..| .+.-++.++++.+ .+.|+-- T Consensus 37 s~v~~~I~AP~~~VW~~v~dF~~~~~w~-P~V~sc~l~~Gdg~vGsvR~l~~~~G~p~~~v~ErL~~~Dd~~~~~~Y~ii 115 (190) T 3kdh_A 37 SLITQRIHAPASVVWPLIRRFDNPERYK-HFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVV 115 (190) T ss_dssp EEEEEEESSCHHHHHHHHHCTTCGGGTC-SSEEEEEEEESSSSTTCEEEEEECSSSCCEEEEEEEEEEETTTTEEEEEEC T ss_pred EEEEEEECCCHHHHHHHHHCCCCHHHCC-CCCCEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEE T ss_conf 4468885199999999886639977877-745369986378998669999997036860799999989677888999997 Q ss_pred CCCCC-CCCCEEEEEEE Q ss_conf 37888-89850899998 Q T0594 72 FRDWN-ECDYSTVTVEF 87 (140) Q Consensus 72 ~~~~~-~~~~s~v~~~~ 87 (140) -.+.+ ....+++++.- T Consensus 116 egd~~l~~Y~Sti~V~~ 132 (190) T 3kdh_A 116 GGEHRLKNYKSVTSVNE 132 (190) T ss_dssp SCCSSSCSCEEEEEEEE T ss_pred CCCCCCEEEEEEEEEEE T ss_conf 47322168999999997 No 26 >2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A* Probab=96.39 E-value=0.047 Score=31.05 Aligned_cols=100 Identities=20% Similarity=0.224 Sum_probs=56.5 Q ss_pred EEEEEEEEECCCHHHHHHHH-CCHHH-HHHHHCCCC------CCCCCCCCCE--EEECCC----EEEEEEEEEEC-CCEE Q ss_conf 07899988779989999973-39768-888618997------6323456833--787032----11028999767-9189 Q T0594 2 MSFEITEEYYVPPEVLFNAF-TDAYT-LTRLSRGSL------AEVDLKVGGK--FSLFSG----SILGEFTEITK-PHKI 66 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~-t~pe~-~~~W~~~~~------~~~d~~~Gg~--~~~~~g----~~~G~~~e~~p-~~~i 66 (140) .++..+..+++|+++||+++ .|-.. +-+|. |.. .+.|-.+|.. +.+..+ .+.=++.+++. ++.+ T Consensus 3 ~~~~~e~~i~~~~e~vw~~~~~d~~~l~pk~~-P~~~~sve~~egdg~~Gsvr~i~~~~~~~~~~~kErl~~~D~~~~~~ 81 (155) T 2flh_A 3 KEFNTQTELSVRLEALWAVLSKDFITVVPKVL-PHIVKDVQLIEGDGGVGTILIFNFLPEVSPSYQREEITEFDESSHEI 81 (155) T ss_dssp EEEEEEEEESSCHHHHHHHHHTSCTTHHHHHC-TTTEEEEEEEECSSSTTCEEEEEECTTSSSCEEEEEEEEEETTTTEE T ss_pred EEEEEEEEECCCHHHHHHHHHHCCCCCCHHHC-CCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEECHHHCEE T ss_conf 68999999338999999987514022040237-65111999966889998799999715998734799999992515889 Q ss_pred EEEEECCCC-CCCCC-EEEEEEEEECCCCCEEEEEEEC Q ss_conf 999813788-88985-0899998633899469999975 Q T0594 67 VEKWKFRDW-NECDY-STVTVEFISVKENHTKLKLTHN 102 (140) Q Consensus 67 ~~tw~~~~~-~~~~~-s~v~~~~~~~~~g~T~l~l~~~ 102 (140) .|+---.+. +.... -..++.+.+.++|+|.++.+-. T Consensus 82 ~Y~iieg~~~~~~~~~y~~ti~v~~~~~g~~~v~w~~~ 119 (155) T 2flh_A 82 GLQVIEGGYLSQGLSYYKTTFKLSEIEEDKTLVNVKIS 119 (155) T ss_dssp EEEEEEEGGGGTTCSEEEEEEEEEEEETTEEEEEEEEE T ss_pred EEEEECCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEE T ss_conf 99998177556341667899999988999579999999 No 27 >2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A Probab=96.01 E-value=0.073 Score=29.86 Aligned_cols=100 Identities=14% Similarity=0.088 Sum_probs=56.7 Q ss_pred EEEEEEEEECCCHHHHHHHH-CCHHH-HHHHHCCCC----CCCCCCCCCE--EEECCC----EEEEEEEEEECCC-EEEE Q ss_conf 07899988779989999973-39768-888618997----6323456833--787032----1102899976791-8999 Q T0594 2 MSFEITEEYYVPPEVLFNAF-TDAYT-LTRLSRGSL----AEVDLKVGGK--FSLFSG----SILGEFTEITKPH-KIVE 68 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~-t~pe~-~~~W~~~~~----~~~d~~~Gg~--~~~~~g----~~~G~~~e~~p~~-~i~~ 68 (140) .+++.+.++++|++++|+|+ .|-.. +-+|+..-. .+.|-.+|.. +.+..+ .+.-++..+++.+ .+.| T Consensus 4 ~~~~~e~~~~v~a~k~~ka~~~d~~~l~Pk~~P~~~~s~~veGdg~~GsIr~~~~~~g~~~~~~keri~~iD~~~~~~~y 83 (154) T 2vjg_A 4 QSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEVKGDGGAGTVRIITLPEGSPITTMTVRTDAVNKEALSYDS 83 (154) T ss_dssp CEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEEESSSSTTCEEEEECCTTCSCCEEEEEEEEEETTTTEEEE T ss_pred EEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCEEEE T ss_conf 49999996158989999988734243474237754107999889999849999988998517899999999363359999 Q ss_pred EEECCCC-CCCCCE--EEEEEEEECCCCCEEEEEEEC Q ss_conf 9813788-889850--899998633899469999975 Q T0594 69 KWKFRDW-NECDYS--TVTVEFISVKENHTKLKLTHN 102 (140) Q Consensus 69 tw~~~~~-~~~~~s--~v~~~~~~~~~g~T~l~l~~~ 102 (140) +- .+++ ....++ ..++.+.+..+|+|.++.+-. T Consensus 84 ~v-iEGd~l~~~~~s~~~~~~v~~~~~gg~vvkwt~~ 119 (154) T 2vjg_A 84 TV-IDGDILLGFIESIETHMVVVPTADGGSITKTTAI 119 (154) T ss_dssp EE-EESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEE T ss_pred EE-EECCCCCCCEEEEEEEEEEEECCCCCEEEEEEEE T ss_conf 99-9444455356999999999657999569999999 No 28 >1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A Probab=95.99 E-value=0.075 Score=29.80 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=56.3 Q ss_pred EEEEEEEEECCCHHHHHHHH-CCHHHH-HHHHCCCC-----CCCCCCCCCE--EEECCCE----EEEEEEEEECC-CEEE Q ss_conf 07899988779989999973-397688-88618997-----6323456833--7870321----10289997679-1899 Q T0594 2 MSFEITEEYYVPPEVLFNAF-TDAYTL-TRLSRGSL-----AEVDLKVGGK--FSLFSGS----ILGEFTEITKP-HKIV 67 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~-t~pe~~-~~W~~~~~-----~~~d~~~Gg~--~~~~~g~----~~G~~~e~~p~-~~i~ 67 (140) ++++.+.+.++||+++|+|+ .+...+ -++..... .+.|-.+|.. +.+..|. +.-++.+++.. +.+. T Consensus 3 ~t~~~E~~~~vpa~k~~k~~~~d~~~l~Pk~~P~~i~~ie~~eGdg~~GsIr~~~~~~g~~~~~~KErie~iD~en~~~~ 82 (159) T 1e09_A 3 FTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYS 82 (159) T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECCSSSCEEEEEEEEEEETTTTEEE T ss_pred EEEEEEEEECCCHHHHHHHHHHCCCCCCCHHCCHHEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEE T ss_conf 59988776057989999988636010172025013038989878899982999998789975389999999815436899 Q ss_pred EEEECCCCCC-CCC--EEEEEEEEECCCCCEEEEEEE Q ss_conf 9981378888-985--089999863389946999997 Q T0594 68 EKWKFRDWNE-CDY--STVTVEFISVKENHTKLKLTH 101 (140) Q Consensus 68 ~tw~~~~~~~-~~~--s~v~~~~~~~~~g~T~l~l~~ 101 (140) |+- .+++.. ..+ -..++.+.+..+++|.+..+- T Consensus 83 y~v-iEGd~l~~~~~s~~~~~~~~~~~~~gsv~k~t~ 118 (159) T 1e09_A 83 YTL-IEGDALGDTLEKISYETKLVASPSGGSIIKSTS 118 (159) T ss_dssp EEE-CCCTTTGGGEEEEEEEEEECCCTTSSEEEEEEE T ss_pred EEE-EECCCCCCCEEEEEEEEEEEECCCCCEEEEEEE T ss_conf 999-955435473689999999997699978999999 No 29 >2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} Probab=95.98 E-value=0.028 Score=32.43 Aligned_cols=98 Identities=11% Similarity=0.171 Sum_probs=52.4 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHH-HHHHHCCCC-----CCCCC-CCCC--EEEECC-CE---EEEEEEEEECCCEEEEE Q ss_conf 789998877998999997339768-888618997-----63234-5683--378703-21---10289997679189999 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYT-LTRLSRGSL-----AEVDL-KVGG--KFSLFS-GS---ILGEFTEITKPHKIVEK 69 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~-~~~W~~~~~-----~~~d~-~~Gg--~~~~~~-g~---~~G~~~e~~p~~~i~~t 69 (140) .++.+..++||+++||+++.+-.. +.+|+.... .+.|. .+|. .+.+.. +. +.-++..+++.++ .++ T Consensus 18 kv~~ev~i~~pa~k~w~~~~~~~~llpk~~P~~i~siei~eGdg~~~Gsvr~~~~~~~g~~~~~kErl~~iD~~~~-~~~ 96 (166) T 2i9y_A 18 KLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKN-LIT 96 (166) T ss_dssp EEEEEEEESSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEETTEEEEEEEEEEEEETTTT-EEE T ss_pred EEEEEEEECCCHHHHHHHHCCCHHHCCHHCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCC-EEE T ss_conf 9999999368999999997174112002261304389998589999864899998359983599999999963008-899 Q ss_pred EECCCCC-CCC--CEEEEEEEEECC-CCCEEEEEEE Q ss_conf 8137888-898--508999986338-9946999997 Q T0594 70 WKFRDWN-ECD--YSTVTVEFISVK-ENHTKLKLTH 101 (140) Q Consensus 70 w~~~~~~-~~~--~s~v~~~~~~~~-~g~T~l~l~~ 101 (140) |..-+.+ ... ....++.+.+.. +|+|.++.+- T Consensus 97 Y~vieGd~~~~~~~~~~ti~v~~~~~~g~~~v~Wt~ 132 (166) T 2i9y_A 97 FRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHL 132 (166) T ss_dssp EEECCTTGGGTEEEEEEEEEEEEEEETTEEEEEEEE T ss_pred EEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEE T ss_conf 999847577760269999999624899982799999 No 30 >2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR- 10 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A Probab=94.73 E-value=0.2 Score=27.24 Aligned_cols=98 Identities=14% Similarity=0.171 Sum_probs=54.1 Q ss_pred EEEEEEEEECCCHHHHHHHH-CCHHHH-HHHHCCCC-----CCCCCCCCCE--EEECCCE----EEEEEEEEECC-CEEE Q ss_conf 07899988779989999973-397688-88618997-----6323456833--7870321----10289997679-1899 Q T0594 2 MSFEITEEYYVPPEVLFNAF-TDAYTL-TRLSRGSL-----AEVDLKVGGK--FSLFSGS----ILGEFTEITKP-HKIV 67 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~-t~pe~~-~~W~~~~~-----~~~d~~~Gg~--~~~~~g~----~~G~~~e~~p~-~~i~ 67 (140) ++++.+.+.++||+++|+|+ .+...+ .++ .+.. .+.|-.+|.. +.+..+. +.-++..++.. +.+. T Consensus 4 ~~~~~E~~~~v~a~k~~ka~~~d~~~l~pk~-p~~i~sve~~eGdgg~GsIr~~~~~~g~~~~~~KErve~iD~~~~~~~ 82 (158) T 2qim_A 4 FTFQDEYTSTIAPAKLYKALVTDADIIIPKA-VETIQSVEIVEGNGGPGTIKKLTFIEGGESKYVLHKIEAIDEANLGYN 82 (158) T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHHH-CTTEEEEEEEESSSSTTCEEEEEEEETTEEEEEEEEEEEEEGGGTEEE T ss_pred EEEEEEEEECCCHHHHHHHHHHCCCCCCCCC-HHHHCCCEEECCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCEEE T ss_conf 7998778603799999998874533225102-445135247608999880999998589983699999998807765899 Q ss_pred EEEECCCCC-CCCCE--EEEEEEEECCCCCEEEEEEE Q ss_conf 998137888-89850--89999863389946999997 Q T0594 68 EKWKFRDWN-ECDYS--TVTVEFISVKENHTKLKLTH 101 (140) Q Consensus 68 ~tw~~~~~~-~~~~s--~v~~~~~~~~~g~T~l~l~~ 101 (140) |+- .+++. ..... +.++.+.+..+|+|.+..+- T Consensus 83 y~v-iEGd~l~~~~~~~~~~~k~~~~~~ggsvvkwt~ 118 (158) T 2qim_A 83 YSI-VGGVGLPDTIEKISFETKLVEGANGGSIGKVTI 118 (158) T ss_dssp EEE-EEESSCCCSEEEEEEEEEEEECSTTCEEEEEEE T ss_pred EEE-EECCCCCCCEEEEEEEEEEECCCCCCEEEEEEE T ss_conf 999-944545454699999999852799977999999 No 31 >2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A* Probab=94.71 E-value=0.2 Score=27.21 Aligned_cols=98 Identities=12% Similarity=0.176 Sum_probs=54.0 Q ss_pred EEEEEEEECCCHHHHHHHHCCH---HHHHHHHCCCCC----CCCCCCCCE--EEECCC----EEEEEEEEEECCCEE-EE Q ss_conf 7899988779989999973397---688886189976----323456833--787032----110289997679189-99 Q T0594 3 SFEITEEYYVPPEVLFNAFTDA---YTLTRLSRGSLA----EVDLKVGGK--FSLFSG----SILGEFTEITKPHKI-VE 68 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~p---e~~~~W~~~~~~----~~d~~~Gg~--~~~~~g----~~~G~~~e~~p~~~i-~~ 68 (140) .+.-+..++||+++||+++.+. ..+.++...-.. +.|-.+|.. +.+..+ .+.=++.++++.++. .| T Consensus 30 ~v~~EieI~apAdkvW~v~~~~d~~~llPk~~P~~i~sveveGDGg~GtIr~~~f~~g~~~~~~KErld~iD~en~~~~Y 109 (201) T 2vq5_A 30 VIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEIIGDGGVGTILDMTFVPGEFPHEYKEKFILVDNEHRLKKV 109 (201) T ss_dssp EEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEESSSSTTCEEEEECCTTCSSCEEEEEEEEEETTTTEEEE T ss_pred EEEEEEEECCCHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCEEEE T ss_conf 99999995599999999860577401211447111218999946999889999987899845899999998142369999 Q ss_pred EEECCCCC-CCCCE--EEEEEEEECCCCCEEEEEEE Q ss_conf 98137888-89850--89999863389946999997 Q T0594 69 KWKFRDWN-ECDYS--TVTVEFISVKENHTKLKLTH 101 (140) Q Consensus 69 tw~~~~~~-~~~~s--~v~~~~~~~~~g~T~l~l~~ 101 (140) +- .+++. +.... ..++.+.+.++|+|.+..+- T Consensus 110 sv-IEGd~L~~~~~sy~~~ikv~p~~~gg~vvk~t~ 144 (201) T 2vq5_A 110 QM-IEGGYLDLGVTYYMDTIHVVPTGKDSCVIKSST 144 (201) T ss_dssp EE-EEEGGGGTTEEEEEEEEEEEEEETTEEEEEEEE T ss_pred EE-ECCCCCCCCEEEEEEEEEEEECCCCCEEEEEEE T ss_conf 99-825655334469999999998899967999999 No 32 >1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural genomics, protein structure initiative; NMR {Caulobacter crescentus CB15} SCOP: d.129.3.6 Probab=94.28 E-value=0.13 Score=28.43 Aligned_cols=98 Identities=10% Similarity=0.062 Sum_probs=51.2 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHC-CCCCCC-CC---CCCCEE--EECCC--EEEEEE---EEEECCCEEEEEE Q ss_conf 789998877998999997339768888618-997632-34---568337--87032--110289---9976791899998 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSR-GSLAEV-DL---KVGGKF--SLFSG--SILGEF---TEITKPHKIVEKW 70 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~-~~~~~~-d~---~~Gg~~--~~~~g--~~~G~~---~e~~p~~~i~~tw 70 (140) ...+++.|++||++||+.+.|=+...+|.. |..... .- ..+... .+..+ ....++ ....++.++.. + T Consensus 3 ~~~~~~~i~~~~e~vf~vI~Dve~Yp~FlP~c~~s~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 81 (148) T 1t17_A 3 RHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGAVSTVDAEAQVGFSFLREKFATRVRRDKDARSID-V 81 (148) T ss_dssp EEEEEEEESSCTHHHHHHHTTTTCCSSCCSSCCCCCEEEEEEETTEEEEEEEEECSTTSSCCEEEEEEEEETTTCEEE-E T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEE-E T ss_conf 327899817999999999998865556563427646875466445543100567776100006999853147734899-9 Q ss_pred ECCCCCCCCCEEEEEEEEECCCCCEEEEEEECC Q ss_conf 137888898508999986338994699999758 Q T0594 71 KFRDWNECDYSTVTVEFISVKENHTKLKLTHNN 103 (140) Q Consensus 71 ~~~~~~~~~~s~v~~~~~~~~~g~T~l~l~~~g 103 (140) ...+.+. ..-.-.+.|.+ .+++|+|++..+- T Consensus 82 ~~~~~~~-~~~~~~w~f~~-~~~gT~V~~~l~~ 112 (148) T 1t17_A 82 SLLYGPF-KRLNNGWRFMP-EGDATRVEFVIEF 112 (148) T ss_dssp EESSTTS-SCEEEEEEEEE-ETTEEEEEEEEEE T ss_pred ECCCCHH-HHCCCCEEECC-CCCCEEEEEEEEE T ss_conf 6066066-52365055325-8884499999999 No 33 >3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} Probab=94.15 E-value=0.27 Score=26.45 Aligned_cols=98 Identities=20% Similarity=0.211 Sum_probs=53.7 Q ss_pred EEEEEEEEECCCHHHHHHHH-CCHHHH-HHHHCCC-----CCCCCCCCCCE--EEECCCE----EEEEEEEEEC-CCEEE Q ss_conf 07899988779989999973-397688-8861899-----76323456833--7870321----1028999767-91899 Q T0594 2 MSFEITEEYYVPPEVLFNAF-TDAYTL-TRLSRGS-----LAEVDLKVGGK--FSLFSGS----ILGEFTEITK-PHKIV 67 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~-t~pe~~-~~W~~~~-----~~~~d~~~Gg~--~~~~~g~----~~G~~~e~~p-~~~i~ 67 (140) .++..+.+..+||+++|+|+ .|-..+ -+..... ..+.|-.+|.. +.+..+. +.-++..++. ++.+. T Consensus 10 ~t~~~E~~~~v~a~klfka~~~d~~~l~Pk~~P~~i~sve~~eGDGg~GSIk~~~~~~g~~~~~~KErie~iD~en~~~~ 89 (165) T 3ie5_A 10 YTIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDGGVGTVTKITFVDGHPLTYMLHKFDEIDAANFYCK 89 (165) T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECTTSSCCEEEEEEEEEEGGGTEEE T ss_pred EEEEEEEEECCCHHHHHHHHHHCCCHHCHHHCCHHCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCEEE T ss_conf 79855588326989999878614201040247412158999867899781999998379864166899999804226899 Q ss_pred EEEECCCCC-CCCCE--EEEEEEEECCCCCEEEEEEE Q ss_conf 998137888-89850--89999863389946999997 Q T0594 68 EKWKFRDWN-ECDYS--TVTVEFISVKENHTKLKLTH 101 (140) Q Consensus 68 ~tw~~~~~~-~~~~s--~v~~~~~~~~~g~T~l~l~~ 101 (140) |+- .+++. ..... +.++.+. +.+|+|.+..+- T Consensus 90 y~v-iEGd~L~~~~~~~~~~~k~~-~~~ggsv~kwt~ 124 (165) T 3ie5_A 90 YTL-FEGDVLRDNIEKVVYEVKLE-AVGGGSKGKITV 124 (165) T ss_dssp EEE-EEEGGGTTTEEEEEEEEEEE-EETTEEEEEEEE T ss_pred EEE-EECCCCCCCEEEEEEEEEEE-CCCCCEEEEEEE T ss_conf 999-91220546189999999994-599966999999 No 34 >2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics, PSI, protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa PAO1} SCOP: d.129.3.7 Probab=93.15 E-value=0.4 Score=25.39 Aligned_cols=120 Identities=9% Similarity=-0.001 Sum_probs=68.3 Q ss_pred CHHHHHHHHCCHHHHHHHHCCCC--CCCCCCCCCEEE--E-CCCEEEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEEE Q ss_conf 98999997339768888618997--632345683378--7-032110289997679189999813788889850899998 Q T0594 13 PPEVLFNAFTDAYTLTRLSRGSL--AEVDLKVGGKFS--L-FSGSILGEFTEITKPHKIVEKWKFRDWNECDYSTVTVEF 87 (140) Q Consensus 13 ~~e~Vw~A~t~pe~~~~W~~~~~--~~~d~~~Gg~~~--~-~~g~~~G~~~e~~p~~~i~~tw~~~~~~~~~~s~v~~~~ 87 (140) +.++||+-|.---.-.+=|.+.. ++.--+.+..+. + ++...--..+.+.|+.++.|++...... ..+.+++++ T Consensus 21 Tr~QlW~GL~lrar~P~~Fvp~l~~c~V~~~~~~~~~Rel~fg~~~v~e~Vtl~~~~~V~f~~~a~~~~--~g~~l~~~I 98 (157) T 2ffs_A 21 DRLQLWEGLVCRAREPQYFVVGLERFEILVDDGDRLHRRLYLPGLVVEDEVVLKAPDSAHYSIKPSAEV--AGGSLDMTI 98 (157) T ss_dssp CHHHHHHHHHHHHHCGGGTCTTCCEEEEEEECSSEEEEEEEETTEEEEEEEEEETTTEEEEEECCCSSS--BEEEEEEEE T ss_pred CHHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCCEEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCC--CCCEEEEEE T ss_conf 899999888984559757202044699997139829999998686468889974884899972565577--886699998 Q ss_pred EECCCCCEEEEEEE-CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHC Q ss_conf 63389946999997-5877553321013453664155889999889851 Q T0594 88 ISVKENHTKLKLTH-NNIPASNKYNEGGVLERCKNGWTQNFLHNIEVIL 135 (140) Q Consensus 88 ~~~~~g~T~l~l~~-~g~~~~~~~~~~~~~e~~~~GW~~~~~~~lk~~~ 135 (140) .++.+|.-.|++.- ...|+.+... ....+..+..|.+.-.+.++.+. T Consensus 99 eepe~g~L~lrF~Ye~~~p~~~~~~-~~~~e~~ksaY~~ad~dTvr~IR 146 (157) T 2ffs_A 99 EEPEPGSLFVRFAYCTRYLQPLGDE-LPYDAFVKQAYIAMDVETIATIR 146 (157) T ss_dssp EEEETTEEEEEEEEEEECSCC--CC-CCCBHHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCEEEEEEEEECCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHH T ss_conf 1389970999999964899988433-56899999999987399999999 No 35 >3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens} Probab=78.19 E-value=1.8 Score=21.45 Aligned_cols=30 Identities=17% Similarity=0.157 Sum_probs=27.3 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHH Q ss_conf 078999887799899999733976888861 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLS 31 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~ 31 (140) +.|..+..+++|+++||+.+.|++...+|- T Consensus 88 ~~fK~e~~Vd~p~~~v~~vL~D~~~R~~WD 117 (258) T 3fo5_A 88 LSFHMEMVVHVDAAQAFLLLSDLRQRPEWD 117 (258) T ss_dssp EEEEEEEEESSCHHHHHHHHHCGGGGGGTC T ss_pred EEEEEEEEECCCHHHHHHHHHCHHHHHHHH T ss_conf 799999997589999999885977633446 No 36 >1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2 Probab=78.09 E-value=2 Score=21.12 Aligned_cols=31 Identities=3% Similarity=-0.120 Sum_probs=27.7 Q ss_pred EEEEEEEEECCCHHHHHHHHCCHHHHHHHHC Q ss_conf 0789998877998999997339768888618 Q T0594 2 MSFEITEEYYVPPEVLFNAFTDAYTLTRLSR 32 (140) Q Consensus 2 ~~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~ 32 (140) ..+..+.+|++++++|++.+.|++...+|-. T Consensus 67 ~~~k~~~~i~~~~~~v~~~l~d~~~r~~Wd~ 97 (224) T 1jss_A 67 YLYKAQGVMDDVVNNVIDHIRPGPWRLDWDR 97 (224) T ss_dssp EEEEEEEEESSCHHHHHHHHSSSTTHHHHCS T ss_pred EEEEEEEEEECCHHHHHHHHHCHHHHHHHHH T ss_conf 6999999990899999999869587888888 No 37 >1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A Probab=45.15 E-value=14 Score=16.12 Aligned_cols=77 Identities=8% Similarity=0.108 Sum_probs=40.9 Q ss_pred EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCE Q ss_conf 789998877998999997339768888618997632345683378703211028999767-9189999813788889850 Q T0594 3 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSLAEVDLKVGGKFSLFSGSILGEFTEITK-PHKIVEKWKFRDWNECDYS 81 (140) Q Consensus 3 ~i~i~~~i~a~~e~Vw~A~t~pe~~~~W~~~~~~~~d~~~Gg~~~~~~g~~~G~~~e~~p-~~~i~~tw~~~~~~~~~~s 81 (140) .+..+..|+||++++|+++.+-. ..+. .....-++..+++ ++.+.|+- ..++....+. T Consensus 6 kl~~eveikapa~kf~~~~~~~~-----------~~~~---------~k~~Kerve~iD~e~~~ity~v-ieGd~~~~y~ 64 (122) T 1vjh_A 6 ALSVKFDVKCPADKFFSAFVEDT-----------NRPF---------EKNGKTEIEAVDLVKKTMTIQM-SGSEIQKYFK 64 (122) T ss_dssp EEEEEEEESSCHHHHHHHHHHHT-----------TSCS---------STTCEEEEEEEETTTTEEEEEE-ECTTGGGTEE T ss_pred EEEEEEEECCCHHHHHHHHHCCC-----------CCCC---------CCCCEEEEEEECCCCCEEEEEE-ECCCCHHHEE T ss_conf 89999984388899855533656-----------7886---------6641899999977788899999-8654010145 Q ss_pred --EEEEEEEECCCC-CEEEEEE Q ss_conf --899998633899-4699999 Q T0594 82 --TVTVEFISVKEN-HTKLKLT 100 (140) Q Consensus 82 --~v~~~~~~~~~g-~T~l~l~ 100 (140) ..++.+.+..+| +|.++.+ T Consensus 65 s~~~~i~v~p~~dg~gs~vkwt 86 (122) T 1vjh_A 65 TLKGSIAVTPIGVGDGSHVVWT 86 (122) T ss_dssp EEEEEEEEEECSSSSCEEEEEE T ss_pred EEEEEEEEEECCCCCCEEEEEE T ss_conf 8899999997789995089999 No 38 >2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural genomics, structural genomics consortium, SGC; 2.50A {Homo sapiens} Probab=35.12 E-value=20 Score=15.16 Aligned_cols=31 Identities=13% Similarity=0.084 Sum_probs=24.5 Q ss_pred CEEEEEEEEECCCHHHHHHHHCCH--HHHHHHH Q ss_conf 907899988779989999973397--6888861 Q T0594 1 GMSFEITEEYYVPPEVLFNAFTDA--YTLTRLS 31 (140) Q Consensus 1 g~~i~i~~~i~a~~e~Vw~A~t~p--e~~~~W~ 31 (140) +..+..+..|+||++.|++.+.+. +.-.+|- T Consensus 66 ~~~~K~~~~i~~~~~~v~~~l~d~~~~~R~~Wd 98 (231) T 2r55_A 66 GNLYRGEGIVYGTLEEVWDCVKPAVGGLRVKWD 98 (231) T ss_dssp SEEEEEEEEESSCHHHHHHHHCC--CCSHHHHC T ss_pred CEEEEEEEEEECCHHHHHHHHHCCCHHHHHHHH T ss_conf 679999999908999999998604167898860 Done!