Query T0599 IDP1205, , 399 residues Match_columns 399 No_of_seqs 147 out of 1826 Neff 6.5 Searched_HMMs 22458 Date Mon Jul 5 09:05:47 2010 Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0599.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0599.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 3hwo_A Isochorismate synthase 100.0 0 0 681.9 30.7 374 12-392 13-394 (394) 2 1k0e_A P-aminobenzoate synthas 100.0 0 0 651.3 35.7 372 2-390 78-452 (453) 3 1qdl_A Protein (anthranilate s 100.0 0 0 638.6 35.5 355 13-392 65-422 (422) 4 1i1q_A Anthranilate synthase c 100.0 0 0 622.4 37.9 347 35-395 146-516 (520) 5 2g5f_A COG0147: anthranilate/p 100.0 0 0 613.8 34.6 339 35-392 106-449 (450) 6 3h9m_A P-aminobenzoate synthet 100.0 0 0 608.6 36.3 345 37-396 84-432 (436) 7 2fn0_A Salicylate synthetase, 100.0 0 0 605.5 34.5 338 36-391 98-437 (437) 8 3bzm_A Menaquinone-specific is 100.0 0 0 594.3 38.8 317 66-392 89-431 (431) 9 3gse_A Menaquinone-specific is 100.0 0 0 583.5 30.8 276 110-394 179-454 (458) 10 1htr_B Gastricsin; aspartyl pr 31.2 15 0.00068 15.2 1.5 19 268-286 254-272 (329) No 1 >3hwo_A Isochorismate synthase ENTC; chorismate-utilizing enzymes, siderophore, enterobactin, enterobactin biosynthesis, ION transport, iron; HET: ISC; 2.30A {Escherichia coli} Probab=100.00 E-value=0 Score=681.86 Aligned_cols=374 Identities=37% Similarity=0.652 Sum_probs=331.7 Q ss_pred HHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHH------HHHCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEE Q ss_conf 9988742777786313788542775661122157------6730133337762463223444406888899846787089 Q T0599 12 EKLLEDYKTESSFFFASPTRTILAEGEFTTVKHH------EIESFPELVQAVLRNAKQAGNPNPIVVGALPFDRRKEVQL 85 (399) Q Consensus 12 ~~ll~~~~~~~~f~F~~~~~~~~a~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fD~~~~~~l 85 (399) .+.+..+.+ ..|+|+++.+++.+.|.++..... ....++....+.+..+...+..+|+++|+|+||+..+..| T Consensus 13 ~~~~~~~~~-~~F~~~~p~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~p~~~G~~~Fd~~~~~~l 91 (394) T 3hwo_A 13 QQTMATLAP-NRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPFDPRQPSSL 91 (394) T ss_dssp ---CCCCCT-TSCEEECSSCCEEEESCSEEECCCCTTCSSTTSHHHHHHHHHHHHHHHTTCSSCEEEEEECSSTTSCCEE T ss_pred HHHHHHCCC-CCCEEECCCCEEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEE T ss_conf 555531488-8865678998399985443882344466553568999999999988753776987999716799997469 Q ss_pred EEECHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHH Q ss_conf 965257664310001--354455665553112568898999999999999986299506875358999627999989999 Q T0599 86 IVPEYSRISERLQLD--PTNHLEINRNLTFEMTPVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLL 163 (399) Q Consensus 86 ~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~I~~Gd~~kvvLsr~~~~~~~~~~d~~~~~ 163 (399) ++|+........... ................+.|++++|.+.|++++++|++|+++||||||++.+++..++|++.+| T Consensus 92 ~vP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~V~~a~~~i~~G~l~KvVLsR~~~~~~~~~~d~~~l~ 171 (394) T 3hwo_A 92 YIPESWQSFSRQEKQASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLL 171 (394) T ss_dssp EECSEEEECCHHHHHHHHHHCCCCCCCCEEEEEEESCHHHHHHHHHHHHHHHHSSSCSEEEEEEEEEEEESSCCCHHHHH T ss_pred EECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHH T ss_conf 98214688044322355555677888765556689899999999999999996699419986748987679999999999 Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHH Q ss_conf 99997389834998854766667862799627830067748879998636778897798999999999850710003568 Q T0599 164 RELAEHNKHGYTFAVNLPKDENENSKTLIGASPELLVSRHGMQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHEHA 243 (399) Q Consensus 164 ~~L~~~~p~~y~f~~~~~~~~~~~~~~~~gaSPE~l~~~~~~~v~t~plaGT~~r~~~~~~D~~~~~~Ll~s~Ke~~Eh~ 243 (399) ++|+..||++|+|++++++ +..|+|+|||+|++++++++.|+|||||+||+.++.+|.+++++|++|+||++||. T Consensus 172 ~~L~~~~p~~y~f~~~~~~-----~~~~~GaSPE~Lv~~~g~~v~t~plAGT~~R~~~~~~D~~~~~~Ll~s~Kd~~EH~ 246 (394) T 3hwo_A 172 ERLIAQNPVSYNFHVPLAD-----GGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRHEHE 246 (394) T ss_dssp HHHHHHCSSSEEEEEECSS-----SCEEEEEECCEEEEEETTEEEEECEEEEEECCSSTTTTTTHHHHHHHCHHHHHHHH T ss_pred HHHHHHCCCCEEEEEECCC-----CCEEEECCCHHHEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH T ss_conf 9985609977399999399-----98999807358749989999997278488899896887999998763713568899 Q ss_pred HHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC Q ss_conf 99999999888645852215543202267346899999999638899989999984888765888779999999986389 Q T0599 244 VVVEAVAAALRPYCHTLYVPEKPSVIHSEAMWHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPF 323 (399) Q Consensus 244 mvvd~ir~~L~~~c~sv~v~~~~~i~~~~~v~HL~s~v~g~L~~~~~~~~~ll~~l~Pt~av~G~Pk~~A~~~I~~lE~~ 323 (399) ||||+++|+|+++|++|+|++.|+|+++++||||+|+|+|+|+ ++.+.++++++|||||||||+||.+||++|+++|++ T Consensus 247 ~Vvd~i~~~L~~~c~~v~v~~~p~v~~~~~v~HL~t~i~g~L~-~~~~~~~l~~aLhPtpav~G~Pk~~A~~~I~elE~~ 325 (394) T 3hwo_A 247 LVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKAN-SQENALTLACLLHPTPALSGFPHQAATQVIAELEPF 325 (394) T ss_dssp HHHHHHHHHHHTTEEEEECCSSCEEEECSSEEEEECCEEEEEC-TTCCHHHHHHHHCSCTTTSEESHHHHHHHHHHHCSS T ss_pred HHHHHHHHHHCCCCCEEEECCCEEEEEECCEEEEEEEEEEEEC-CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC T ss_conf 9999999864215984458896599998889999979999987-999999999981999757887289999999985699 Q ss_pred CCCCEEEEEEEECCCCCEEEEEEEEEEEEECCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 996303335765289872104635677789888999973177026887899999999999999984878 Q T0599 324 DREFFTGMLGWSDLNGDGEWIVTIRCAEVQENTLRLYAGAGVVAESKPEDELAETSAKFQTMLKALGLN 392 (399) Q Consensus 324 ~Rg~Y~G~vG~~~~~G~~~~~V~IRsa~~~~~~~~l~AGaGIv~~S~p~~E~~Et~~K~~~ll~alg~~ 392 (399) +||+|||+|||+|.+|++||+|+|||++++++++++|||||||+||+|+.||+||.+|+++||++|||+ T Consensus 326 ~Rg~YaG~vGw~d~~G~~e~~V~IR~a~~~~~~~~l~AGaGIV~~S~Pe~E~~Et~~K~~~~l~aLGl~ 394 (394) T 3hwo_A 326 DRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH 394 (394) T ss_dssp CCTTTTSEEEEEETTSCEEEEECCSEEEEETTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHTCC T ss_pred CCCCEEEEEEEEECCCCEEEEEEEEEEEEECCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC T ss_conf 987447899999369987999994489999999999972589789996999999999999999975799 No 2 >1k0e_A P-aminobenzoate synthase component I; aminodeoxychorismate synthase, chorismate, glutamine, tryptophan, PABA synthase, lyase; HET: TRP; 2.00A {Escherichia coli} SCOP: d.161.1.1 PDB: 1k0g_A* Probab=100.00 E-value=0 Score=651.33 Aligned_cols=372 Identities=22% Similarity=0.298 Sum_probs=319.7 Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCC Q ss_conf 62579999999988742777786313788542775661122157673013333776246322344440688889984678 Q T0599 2 NEFTAVKELSEKLLEDYKTESSFFFASPTRTILAEGEFTTVKHHEIESFPELVQAVLRNAKQAGNPNPIVVGALPFDRRK 81 (399) Q Consensus 2 ~~~~~l~~l~~~ll~~~~~~~~f~F~~~~~~~~a~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fD~~~ 81 (399) |+|..++++.++.--......++||.++ ..|+++|+.+..++.++.... .....|+..+.++...++|||.. T Consensus 78 dP~~~L~~~l~~~~~~~~~~~~lPF~GG-----~vGy~sYD~~~~~E~l~~~~~---~~~~~Pd~~f~~~d~~iv~Dh~~ 149 (453) T 1k0e_A 78 DPLQVLQQVLDRADIRPTHNEDLPFQGG-----ALGLFGYDLGRRFESLPEIAE---QDIVLPDMAVGIYDWALIVDHQR 149 (453) T ss_dssp CHHHHHHHHHHHTTCCCCCCTTCSCCSE-----EEEEECGGGGGGTSCCCCCSB---CCCCCCSEEEEEESEEEEEETTT T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCC-----EEEEEEEEEHHHHCCCCCCCC---CCCCCCCHHEEEECEEEEEECCC T ss_conf 9999999999864788776668996642-----899982101255347886565---56578711225403489964134 Q ss_pred CEEEEEECHHHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHH Q ss_conf 708996525766-4310001354455665553112568898999999999999986299506875358999627999989 Q T0599 82 EVQLIVPEYSRI-SERLQLDPTNHLEINRNLTFEMTPVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQ 160 (399) Q Consensus 82 ~~~l~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~I~~Gd~~kvvLsr~~~~~~~~~~d~~ 160 (399) ...+++...... .....................+.+..++++|.++|++++++|++||+|||||||++.+.+. .||+ T Consensus 150 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~V~~~~~~I~~Gdi~qvvls~~~~~~~~--~~~~ 227 (453) T 1k0e_A 150 HTVSLLSHNDVNARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYS--GDEW 227 (453) T ss_dssp TEEEEEESSCHHHHHHHHHHCCCCCCCCCEECSCCEESSCHHHHHHHHHHHHHHHHTTSCSCEEEEEEEEEEEE--SCHH T ss_pred CEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCC--CCHH T ss_conf 67899961532566888875303877665567877578999999999999999998699658875406533468--9979 Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHH Q ss_conf 99999997389834998854766667862799627830067748879998636778897798999999999850710003 Q T0599 161 KLLRELAEHNKHGYTFAVNLPKDENENSKTLIGASPELLVSRHGMQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLH 240 (399) Q Consensus 161 ~~~~~L~~~~p~~y~f~~~~~~~~~~~~~~~~gaSPE~l~~~~~~~v~t~plaGT~~r~~~~~~D~~~~~~Ll~s~Ke~~ 240 (399) .+|++|+..||+||+||+++++ ..|+|+|||+|++++++++.|+|||||+||+.++++|..++++|++|+||++ T Consensus 228 ~~y~~Lr~~~p~p~~~~~~~~~------~~~~gaSPE~l~~~~~~~~~t~piaGT~~r~~~~~~d~~~~~~L~~s~Ke~a 301 (453) T 1k0e_A 228 QAFLQLNQANRAPFSAFLRLEQ------GAILSLSPERFILCDNSEIQTRPIKGTLPRLPDPQEDSKQAVKLANSAKDRA 301 (453) T ss_dssp HHHHHHHHHHCCTEEEEEECSS------CEEEEEECCBCEEEETTEEEECCEEEEEEC--------------CCCTTTTT T ss_pred HHHHHHHHHCCCCCCCCCCCCC------CEEEECCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHH T ss_conf 9999998537775311014444------2254035787764305864787306788899884666999987543453689 Q ss_pred HHHHHHHHHHHHHHHHC--CCCEECCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH Q ss_conf 56899999999888645--8522155432022673468999999996388999899999848887658887799999999 Q T0599 241 EHAVVVEAVAAALRPYC--HTLYVPEKPSVIHSEAMWHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQ 318 (399) Q Consensus 241 Eh~mvvd~ir~~L~~~c--~sv~v~~~~~i~~~~~v~HL~s~v~g~L~~~~~~~~~ll~~l~Pt~av~G~Pk~~A~~~I~ 318 (399) ||.||||++||||+++| ++|+|++++.++++++|+||+|.|+|+|+ ++.+.+|+++++||||||||+||.+||++|+ T Consensus 302 Eh~mvvdl~rndl~~~~~~g~v~v~~~~~v~~~~~v~hl~s~v~~~l~-~~~~~~~~l~al~P~gav~G~Pk~~A~~~I~ 380 (453) T 1k0e_A 302 ENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITAQLP-EQLHASDLLRAAFPGGSITGAPKVRAMEIID 380 (453) T ss_dssp HHHHHHHHHHHHHTTTSCTTCCEEEEEEEEEECSSEEEEEEEEEEECC-TTSCHHHHHHHHCSCGGGTCSSHHHHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCCCCCEEECCCCC-CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHH T ss_conf 999999999977414265884625310121220222223312133157-7899999998608887467698799999999 Q ss_pred HHCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHC Q ss_conf 863899963033357652898721046356777898889999731770268878999999999999999848 Q T0599 319 KIEPFDREFFTGMLGWSDLNGDGEWIVTIRCAEVQENTLRLYAGAGVVAESKPEDELAETSAKFQTMLKALG 390 (399) Q Consensus 319 ~lE~~~Rg~Y~G~vG~~~~~G~~~~~V~IRsa~~~~~~~~l~AGaGIv~~S~p~~E~~Et~~K~~~ll~alg 390 (399) ++|+++||+|||++||++.+|+++|+|+|||+++++++++++||||||+||+|+.||+||.+|+++||+||- T Consensus 381 ~~E~~~Rg~Y~G~~G~~~~~g~~~~~v~IR~~~~~~~~~~~~aG~GIv~~S~p~~E~~Et~~K~~~~l~al~ 452 (453) T 1k0e_A 381 ELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAINGQIFCSAGGGIVADSQEEAEYQETFDKVNRILKQLE 452 (453) T ss_dssp HHSSBCCTTTTSEEEEEETTSCEEEBCCCSEEEEETTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHT T ss_pred HHCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHC T ss_conf 855999875478999994699889999954899989999999605890888848999999999999999962 No 3 >1qdl_A Protein (anthranilate synthase (TRPE-subunit)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: d.161.1.1 Probab=100.00 E-value=0 Score=638.59 Aligned_cols=355 Identities=28% Similarity=0.378 Sum_probs=309.4 Q ss_pred HHHHHCCC-CCCCCCCCCCCCEEEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECHH Q ss_conf 98874277-77863137885427756611221576730133337762463223444406888899846787089965257 Q T0599 13 KLLEDYKT-ESSFFFASPTRTILAEGEFTTVKHHEIESFPELVQAVLRNAKQAGNPNPIVVGALPFDRRKEVQLIVPEYS 91 (399) Q Consensus 13 ~ll~~~~~-~~~f~F~~~~~~~~a~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fD~~~~~~l~v~~~~ 91 (399) .++..+.. +.+.+|.+| ..||++|+....++.++.... ...+.|+..+.++...++|||.....++..+.. T Consensus 65 ~~l~~~~~~~~p~~F~GG-----~vGy~sYd~~~~~E~i~~~~~---~~~~~P~~~f~~~d~~ivfDh~~~~~~~~~~~~ 136 (422) T 1qdl_A 65 GYLKDLKLADIPGLFKGG-----MIGYISYDAVRFWEKIRDLKP---AAEDWPYAEFFTPDNIIIYDHNEGKVYVNADLS 136 (422) T ss_dssp TTTTTCCCCCCSSSCSSE-----EEEEECGGGGGGTSCCCCCSC---BSSCCCSEEEECCSEEEEEEGGGTEEEEESCCS T ss_pred HHHHHCCCCCCCCCCCCC-----EEEEEECCCHHHHCCCCCCCC---CCCCCCCEEEEEEEEEEEECCCCCCEEEECHHH T ss_conf 999863776798776777-----899980334244246776676---645897246772008998046557055301011 Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCC Q ss_conf 66431000135445566555311256889899999999999998629950687535899962799998999999997389 Q T0599 92 RISERLQLDPTNHLEINRNLTFEMTPVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNK 171 (399) Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~I~~Gd~~kvvLsr~~~~~~~~~~d~~~~~~~L~~~~p 171 (399) .. .............+.+++++++|.+.|++++++|++||++||||||++...+.. |++.+|++|+..|| T Consensus 137 ~~--------~~~~~~~~~~~~~~~~~~~k~~Y~~~V~~~~e~I~~Gd~~qvvLsr~~~~~~~~--~~~~~y~~Lr~~np 206 (422) T 1qdl_A 137 SV--------GGCGDIGEFKVSFYDESLNKNSYERIVSESLEYIRSGYIFQVVLSRFYRYIFSG--DPLRIYYNLRRINP 206 (422) T ss_dssp CS--------CCSCSCCCEEEEEEEEESCHHHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEEE--CTHHHHHHHHHHSC T ss_pred HH--------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCC--CHHHHHHHHHHHCC T ss_conf 22--------222233332034354689999999999999999977980699553689871366--67899999997689 Q ss_pred CCEEEEEECCCCCCCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH Q ss_conf 83499885476666786279962783006774887999863677889779899999999985071000356899999999 Q T0599 172 HGYTFAVNLPKDENENSKTLIGASPELLVSRHGMQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHEHAVVVEAVAA 251 (399) Q Consensus 172 ~~y~f~~~~~~~~~~~~~~~~gaSPE~l~~~~~~~v~t~plaGT~~r~~~~~~D~~~~~~Ll~s~Ke~~Eh~mvvd~ir~ 251 (399) +||+||++.++ ..|+|+|||+|++++++++.|+|||||+||+.++.+|.+++.+|++|+||++||.||||++|| T Consensus 207 sp~~~~~~~~~------~~~igaSPE~l~~~~~~~~~t~piaGT~~rg~~~~ed~~~~~~L~~s~Ke~~Eh~mvvd~~rn 280 (422) T 1qdl_A 207 SPYMFYLKFDE------KYLIGSSPELLFRVQDNIVETYPIAGTRPRGADQEEDLKLELELMNSEKDKAEHLMLVDLARN 280 (422) T ss_dssp CSEEEEEEETT------EEEEEEESCEEEEEETTEEEECCEEEEEECCSSHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH T ss_pred CCCEEEEECCC------CEEEEECCHHHEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 97268885279------729961737870423851798126887437987378899999861053989999999999999 Q ss_pred HHHHHC--CCCEECCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE Q ss_conf 888645--852215543202267346899999999638899989999984888765888779999999986389996303 Q T0599 252 ALRPYC--HTLYVPEKPSVIHSEAMWHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPFDREFFT 329 (399) Q Consensus 252 ~L~~~c--~sv~v~~~~~i~~~~~v~HL~s~v~g~L~~~~~~~~~ll~~l~Pt~av~G~Pk~~A~~~I~~lE~~~Rg~Y~ 329 (399) ||+++| ++|+|++.+.|+++++||||+|.|+|+|+ ++.+.+++++++||||||||+||.+||++|+++|+++||+|| T Consensus 281 dL~~~~~~g~v~v~~~~~v~~~~~v~hl~s~i~g~l~-~~~~~~~~l~~l~P~~av~G~Pk~~a~~~I~~~E~~~Rg~Y~ 359 (422) T 1qdl_A 281 DLGKVCVPGTVKVPELMYVEKYSHVQHIVSKVIGTLK-KKYNALNVLSATFPAGTVSGAPKPMAMNIIETLEEYKRGPYA 359 (422) T ss_dssp HHHTTBCTTCCEEEEEEEEEECSSEEEEEEEEEEEBC-TTCCHHHHHHHHCSCGGGSEESHHHHHHHHHHHSSSBCTTTT T ss_pred HHHHHCCCCCEECCCCEEEEEECCCCCCCEEEEEEEC-CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE T ss_conf 9872357991877764038983650243505999955-889989999985478887899869999999986599986606 Q ss_pred EEEEEECCCCCEEEEEEEEEEEEECCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 335765289872104635677789888999973177026887899999999999999984878 Q T0599 330 GMLGWSDLNGDGEWIVTIRCAEVQENTLRLYAGAGVVAESKPEDELAETSAKFQTMLKALGLN 392 (399) Q Consensus 330 G~vG~~~~~G~~~~~V~IRsa~~~~~~~~l~AGaGIv~~S~p~~E~~Et~~K~~~ll~alg~~ 392 (399) |++||++.+|+++|+|+|||++++++.++++||||||++|+|+.||+||.+|+++||+|||+. T Consensus 360 G~~G~i~~~g~~~~~V~IR~~~~~~~~~~~~aG~GIv~~S~p~~E~~Et~~K~~~~l~alg~~ 422 (422) T 1qdl_A 360 GAVGFISADGNAEFAIAIRTAFLNKELLRIHAGAGIVYDSNPESEYFETEHKLKALKTAIGVR 422 (422) T ss_dssp EEEEEEETTSCEEEEEECSEEEEETTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHTTCC T ss_pred EEEEEEECCCCEEEEEEEEEEEEECCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC T ss_conf 899999489978999993289999999999972489078886799999999999999985789 No 4 >1i1q_A Anthranilate synthase component I; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: d.161.1.1 PDB: 1i7q_A 1i7s_A* Probab=100.00 E-value=0 Score=622.35 Aligned_cols=347 Identities=24% Similarity=0.317 Sum_probs=303.1 Q ss_pred EEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECH----H----HHH------HHHHCC Q ss_conf 75661122157673013333776246322344440688889984678708996525----7----664------310001 Q T0599 35 AEGEFTTVKHHEIESFPELVQAVLRNAKQAGNPNPIVVGALPFDRRKEVQLIVPEY----S----RIS------ERLQLD 100 (399) Q Consensus 35 a~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fD~~~~~~l~v~~~----~----~~~------~~~~~~ 100 (399) ..||++|+....++.++.... ..+.|+..+.++...++|||.....+++... . ... ...... T Consensus 146 ~~Gy~sYd~i~~~E~i~~~~~----~~~~Pd~~~~~~~~~ivfDh~~~~~~li~~~~~~~~~~~~~~~~~l~~l~~~l~~ 221 (520) T 1i1q_A 146 FGGLFAYDLVAGFEALPHLEA----GNNCPDYCFYLAETLMVIDHQKKSTRIQASLFTASDREKQRLNARLAYLSQQLTQ 221 (520) T ss_dssp EEEEECGGGGGGTSCCCCCCC----SSSCCSEEEEEEEEEEEEETTTTEEEEEEEECSCCHHHHHHHHHHHHHHHHHHHS T ss_pred CEEEEHHHHHHHHCCCCCCCC----CCCCCCEEEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC T ss_conf 189882997876446899866----6899756868220799981423415542013566578999999999987765326 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEC Q ss_conf 35445566555311256889899999999999998629950687535899962799998999999997389834998854 Q T0599 101 PTNHLEINRNLTFEMTPVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKHGYTFAVNL 180 (399) Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~I~~Gd~~kvvLsr~~~~~~~~~~d~~~~~~~L~~~~p~~y~f~~~~ 180 (399) .....+........+.++.++++|.++|++++++|++||++||||||++.+++. +++++|++|+..||+||+||+++ T Consensus 222 ~~~~~~~~~~~~~~~~sn~~k~~y~~~V~~~~~~I~~Gd~~qvvlsr~~~~~~~---~~~~ly~~Lr~~np~~y~~~~~~ 298 (520) T 1i1q_A 222 PAPPLPVTPVPDMRCECNQSDDAFGAVVRQLQKAIRAGEIFQVVPSRRFSLPCP---SPLAAYYVLKKSNPSPYMFFMQD 298 (520) T ss_dssp CCCCCCCCCCTTCCCEESSCHHHHHHHHHHHHHHHHTTSCSEECCEEEEEEECS---CHHHHHHHHHHHSCCSEEEEEEC T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCC---CHHHHHHHHHHHCCCCCCCCCCC T ss_conf 776411124666640136999999999999999987798489984168412554---11658999997588754333344 Q ss_pred CCCCCCCCCEEEEECCCEEEEEE--CCEEEEEECCCCCCCCC------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH Q ss_conf 76666786279962783006774--88799986367788977------98999999999850710003568999999998 Q T0599 181 PKDENENSKTLIGASPELLVSRH--GMQVISNPLAGSRPRSD------DPVEDKRRAEELLSSPKDLHEHAVVVEAVAAA 252 (399) Q Consensus 181 ~~~~~~~~~~~~gaSPE~l~~~~--~~~v~t~plaGT~~r~~------~~~~D~~~~~~Ll~s~Ke~~Eh~mvvd~ir~~ 252 (399) ++. .++|+|||+|++++ ++++.|+|||||++||. ++++|.+++.+|++|+||++||.||||++||| T Consensus 299 ~~~------~~~g~SPE~~~~~~~~~~~v~t~piaGT~~Rg~~~~~~~~~~~d~~~~~~l~~~~Ke~aEh~mvvd~~rnd 372 (520) T 1i1q_A 299 NDF------TLFGASPESSLKYDAASRQIEIYPIAGTRPRGRRADGTLDRDLDSRIELDMRTDHKELSEHLMLVDLARND 372 (520) T ss_dssp SSC------EEEEEESSCSEEEETTTTEEEECCEEEEEECCBCTTSCBCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH T ss_pred CCC------CEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 445------23526676898762464079950111235678886433224578887666641613889999999988760 Q ss_pred HHHHC--CCCEECCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 88645--8522155432022673468999999996388999899999848887658887799999999863899963033 Q T0599 253 LRPYC--HTLYVPEKPSVIHSEAMWHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPFDREFFTG 330 (399) Q Consensus 253 L~~~c--~sv~v~~~~~i~~~~~v~HL~s~v~g~L~~~~~~~~~ll~~l~Pt~av~G~Pk~~A~~~I~~lE~~~Rg~Y~G 330 (399) |+++| ++|.|++.+.++++++||||+|.|+|+|+ ++.+.+++++++||||||||+||.+||++|+++|+++||+||| T Consensus 373 l~~~~~~~sv~v~~~~~~~~~~~v~hl~s~v~g~l~-~~~~~~~~l~~~~P~~av~G~Pk~~A~~~I~~~E~~~Rg~Y~G 451 (520) T 1i1q_A 373 LARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELR-HDLDALHAYRACMNMGTLSGAPKVRAMQLIADAEGQRRGSYGG 451 (520) T ss_dssp HHHHBCTTCCEEEEEEEEEECSSEEEEEEEEEEEBC-TTCCHHHHHHHHCSCGGGSEESHHHHHHHHHHHHCSCCTTTTS T ss_pred CCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEC-CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE T ss_conf 265457873023663024421451376557999989-9999999998739997316635899999999866998766368 Q ss_pred EEEEECCCCCEEEEEEEEEEEEECCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHH Q ss_conf 35765289872104635677789888999973177026887899999999999999984878233 Q T0599 331 MLGWSDLNGDGEWIVTIRCAEVQENTLRLYAGAGVVAESKPEDELAETSAKFQTMLKALGLNDSS 395 (399) Q Consensus 331 ~vG~~~~~G~~~~~V~IRsa~~~~~~~~l~AGaGIv~~S~p~~E~~Et~~K~~~ll~alg~~~~~ 395 (399) ++||++.+|+++|+|+|||+++++++++++||||||+||+|+.||+||.+|+++||+||+....+ T Consensus 452 ~~G~~~~~g~~~~~v~IR~~~~~~~~~~~~aG~GIv~~S~p~~E~~Et~~K~~~~l~al~~~~~~ 516 (520) T 1i1q_A 452 AVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLRAIATAHHA 516 (520) T ss_dssp EEEEEETTSCEEEEECCSEEEEETTEEEEEEECCBCTTCCHHHHHHHHHHHHHHHHHHHHHHTCC T ss_pred EEEEEECCCCEEEEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999359988989865279998999999973589088885899999999999999999997653 No 5 >2g5f_A COG0147: anthranilate/para-aminobenzoate synthases component I; beta sandwhich, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: d.161.1.1 PDB: 2i6y_A Probab=100.00 E-value=0 Score=613.78 Aligned_cols=339 Identities=22% Similarity=0.267 Sum_probs=292.5 Q ss_pred EEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECH--HHHHHHHHCCCCCCCCCCCCCC Q ss_conf 75661122157673013333776246322344440688889984678708996525--7664310001354455665553 Q T0599 35 AEGEFTTVKHHEIESFPELVQAVLRNAKQAGNPNPIVVGALPFDRRKEVQLIVPEY--SRISERLQLDPTNHLEINRNLT 112 (399) Q Consensus 35 a~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fD~~~~~~l~v~~~--~~~~~~~~~~~~~~~~~~~~~~ 112 (399) +.|+++|+.+...+.++.. ...+.++..+.++...+.|||..... +.... .....+.... ... ..+.. T Consensus 106 ~~G~~sYe~~~~~~~l~~~-----~~~~~P~~~l~~p~~~i~~d~~~~~l-~~~~~~~~~~~~~l~~~--~~~--~~p~~ 175 (450) T 2g5f_A 106 AFGWVAFEFGVHRYGLQQR-----LAPHTPLARVFSPRTRIMVSEKEIRL-FDAGIRHREAIDRLLAT--GVR--EVPQS 175 (450) T ss_dssp EEEEECGGGGSGGGTCGGG-----SCTTCEEEEEEEEEEEEEECSSEEEE-CGGGGGGHHHHHHHHHH--CCC--CCCCC T ss_pred EEEEECHHHHHHHCCCCCC-----CCCCCCCEEEEECCEEEEEECCEEEE-EECCCCHHHHHHHHHHC--CCC--CCCCC T ss_conf 8999717777774189988-----89999848999207999999998489-97875617899987635--566--78887 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEE Q ss_conf 11256889899999999999998629950687535899962799998999999997389834998854766667862799 Q T0599 113 FEMTPVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKHGYTFAVNLPKDENENSKTLI 192 (399) Q Consensus 113 ~~~~~~~~~~~y~~~v~~~~~~I~~Gd~~kvvLsr~~~~~~~~~~d~~~~~~~L~~~~p~~y~f~~~~~~~~~~~~~~~~ 192 (399) ..+...++++.|+++|++++++|++|+++||||||++.+++. .|++.+|+.|+..||++|+|++++++ ..|+ T Consensus 176 ~~~~~~~~~~~y~~~V~~a~~~I~~G~~~KVVLsr~~~~~~~--~d~~~~~~~lr~~n~~~~~f~~~~~~------~~~i 247 (450) T 2g5f_A 176 RSVDVSDDPSGFRRRVAVAVDEIAAGRYHKVILSRCVEVPFA--IDFPLTYRLGRRHNTPVRSFLLQLGG------IRAL 247 (450) T ss_dssp CCCCCCCCTTCHHHHHHHHHHHHHTTSCSEEEEEEEEECSSC--BCHHHHHHHHHTTCCCSEEEEEEETT------EEEE T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCEECCCCC--CCHHHHHHHHHHCCCCCEEEEEECCC------CEEE T ss_conf 767467999999999999999997698589993337357789--99999999997569996289995699------6899 Q ss_pred EECCCEEEEEEC-CEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC--CCCEECCCCCCC Q ss_conf 627830067748-87999863677889779899999999985071000356899999999888645--852215543202 Q T0599 193 GASPELLVSRHG-MQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHEHAVVVEAVAAALRPYC--HTLYVPEKPSVI 269 (399) Q Consensus 193 gaSPE~l~~~~~-~~v~t~plaGT~~r~~~~~~D~~~~~~Ll~s~Ke~~Eh~mvvd~ir~~L~~~c--~sv~v~~~~~i~ 269 (399) |+|||+|+++++ +++.|+|||||+||+.++++|..++++|++|+||++||.|+||++||||+++| ++|.|++.+.++ T Consensus 248 GaSPE~L~~~~~~g~v~T~pLAGT~~r~~~~~~d~~~~~~Ll~s~Ke~~Eh~mvVd~~~~dl~~~~~~~sv~v~~~~~v~ 327 (450) T 2g5f_A 248 GYSPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRSSLEEITDIAEPGSAAVIDFMTVR 327 (450) T ss_dssp EEECCEEEEECTTSEEEECCEEEEEECCSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTBCTTCCEEEEEEEEE T ss_pred EECHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEE T ss_conf 98858975314678268353369877888726679987775430357899999999998754666767851123310366 Q ss_pred CCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEE Q ss_conf 26734689999999963889998999998488876588877999999998638999630333576528987210463567 Q T0599 270 HSEAMWHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPFDREFFTGMLGWSDLNGDGEWIVTIRC 349 (399) Q Consensus 270 ~~~~v~HL~s~v~g~L~~~~~~~~~ll~~l~Pt~av~G~Pk~~A~~~I~~lE~~~Rg~Y~G~vG~~~~~G~~~~~V~IRs 349 (399) ++++||||+|.|+|+|+ ++.+.+++++++||||||||+||.+||++|+++|+++||+|||+|||++.+|+++|+|+||| T Consensus 328 ~~~~v~HL~s~v~g~l~-~~~~~~~~l~al~Pt~av~G~Pk~~A~~~I~~lE~~~Rg~Y~G~vG~~~~~g~~~~~v~IRs 406 (450) T 2g5f_A 328 ERGSVQHLGSTIRARLD-PSSDRMAALEALFPAVTASGIPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRA 406 (450) T ss_dssp EETTEEEEEEEEEEEBC-TTCCHHHHHHHSCSCGGGSEESHHHHHHHHHHHSCSCCTTTTSEEEEEETTSCEEEEECCEE T ss_pred EEEEEEEEEECCCCCCC-CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEEEEE T ss_conf 76228999982422123-46316888640589876899867999999998659998764789999956998799999678 Q ss_pred EEEECCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 7789888999973177026887899999999999999984878 Q T0599 350 AEVQENTLRLYAGAGVVAESKPEDELAETSAKFQTMLKALGLN 392 (399) Q Consensus 350 a~~~~~~~~l~AGaGIv~~S~p~~E~~Et~~K~~~ll~alg~~ 392 (399) ++++++++++|||||||+||+|++||+||.+|+++|+++|... T Consensus 407 ~~~~~~~~~l~aG~GIv~~S~pe~E~~Et~~K~~~l~~~L~~~ 449 (450) T 2g5f_A 407 AYQVGGRTWLRAGAGIIEESEPEREFEETCEKLSTLTPYLVAR 449 (450) T ss_dssp EEEETTEEEEEEEEEECTTCCHHHHHHHHHHHHTTTGGGCCBC T ss_pred EEEECCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9998999999970289389884799999999999999987356 No 6 >3h9m_A P-aminobenzoate synthetase, component I; para-aminobenzoate synthetase, cytophaga hutchinsonii,YP_678417.1, CHU_1808; HET: PGE; 1.57A {Cytophaga hutchinsonii atcc 33406} Probab=100.00 E-value=0 Score=608.62 Aligned_cols=345 Identities=19% Similarity=0.255 Sum_probs=293.7 Q ss_pred EEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCC Q ss_conf 66112215767301333377624632234444068888998467870899652576643100013544556655531125 Q T0599 37 GEFTTVKHHEIESFPELVQAVLRNAKQAGNPNPIVVGALPFDRRKEVQLIVPEYSRISERLQLDPTNHLEINRNLTFEMT 116 (399) Q Consensus 37 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fD~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (399) ||++|+....++.++......+. .|+..+.++...+.+++.............. ..... .............+. T Consensus 84 Gy~sYDl~~~iE~l~~~~~~~~~---~P~~~f~~p~~~~~~~~~~~~~~~~~~~~~~-~~i~~--~~~~~~~~~~~~~~~ 157 (436) T 3h9m_A 84 VFASYDGKNSVEQLHTSKEAGIA---FAAATFFIPEHVWEIQPDGILIHKGSGSSLV-TEIQH--AEPSTPVQQSDIFVK 157 (436) T ss_dssp EEECGGGGGGTSSCCCCSCBSSC---CCSEEEEECSEEEEEETTEEEEEESSCHHHH-HHHHH--C-------CCCCCCE T ss_pred EEEEHHHHHHHCCCCCCCCCCCC---CCCEEEEEEEEEEEECCCEEEEEECCHHHHH-HHHHH--HCCCCCCCCCCCCCC T ss_conf 99804643464169998867569---9728834111545520213888706578899-99975--044776434666543 Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECC Q ss_conf 68898999999999999986299506875358999627999989999999973898349988547666678627996278 Q T0599 117 PVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKHGYTFAVNLPKDENENSKTLIGASP 196 (399) Q Consensus 117 ~~~~~~~y~~~v~~~~~~I~~Gd~~kvvLsr~~~~~~~~~~d~~~~~~~L~~~~p~~y~f~~~~~~~~~~~~~~~~gaSP 196 (399) +..++++|.+.|++++++|++||++||||||++.+.+ ++||+++|++|+..||+||+|++++++ ..|+|+|| T Consensus 158 ~~~sk~~Y~~~V~~~~~~I~~Gd~~kvvlsr~~~~~~--~~dp~~~~~~L~~~~p~~y~~~~~~~~------~~~igaSP 229 (436) T 3h9m_A 158 QVVSKESYFNAFDELQQIIAQGDAYEINYCIPFTAKG--NISPAATYQRLNKKTPMPFSVYYKFNT------EYILSASP 229 (436) T ss_dssp ESSCHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEEC--CCCHHHHHHHHHHHSCCTTEEEEEETT------EEEEECCC T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC--CCCHHHHHHHHHHHCCCCEEEEEECCC------CEEEECCH T ss_conf 5799999999999999999859849999777335789--999999999999778983133130799------78993187 Q ss_pred CEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC--CCCEECCCCCCCCCCCE Q ss_conf 3006774887999863677889779899999999985071000356899999999888645--85221554320226734 Q T0599 197 ELLVSRHGMQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHEHAVVVEAVAAALRPYC--HTLYVPEKPSVIHSEAM 274 (399) Q Consensus 197 E~l~~~~~~~v~t~plaGT~~r~~~~~~D~~~~~~Ll~s~Ke~~Eh~mvvd~ir~~L~~~c--~sv~v~~~~~i~~~~~v 274 (399) |+|++++++++.|+|||||+||+.++.+|.++.++|++|+||++||.||||++||||+++| ++|.|++.+.|+++++| T Consensus 230 E~Ll~~~~~~l~T~piAGT~~R~~~~~~D~~~~~~Ll~s~Ke~~Eh~mvvdlirndL~~v~~~~~v~v~~~~~i~~~~~v 309 (436) T 3h9m_A 230 ERFIKKTGDTIISQPIKGTSKRGKSKAEDEMLKQQLGTSEKEQSENTMIVDLVRNDLSRTAVAGSVCVPELSGLYTFPNV 309 (436) T ss_dssp CEEEEEETTEEEECCBCCCC-------------------HHHHHHHHHHHHHHHHHHHTTBCTTCCEEEEEEEEEECSSC T ss_pred HHHHEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCC T ss_conf 99855778447864468886777781666877766414008899999999845523114465673304653378620022 Q ss_pred EEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEC Q ss_conf 68999999996388999899999848887658887799999999863899963033357652898721046356777898 Q T0599 275 WHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPFDREFFTGMLGWSDLNGDGEWIVTIRCAEVQE 354 (399) Q Consensus 275 ~HL~s~v~g~L~~~~~~~~~ll~~l~Pt~av~G~Pk~~A~~~I~~lE~~~Rg~Y~G~vG~~~~~G~~~~~V~IRsa~~~~ 354 (399) +||+|.|+|+++ ++.+.+++++++||||||||+||.+||++|+++|+++||+|||+|||++.+|++||+|+||||++++ T Consensus 310 ~hl~s~v~~~l~-~~~~~~d~l~al~Pt~av~G~Pk~~A~~~I~~~E~~~Rg~YsG~iG~~~~~g~~d~~V~IRs~~~~~ 388 (436) T 3h9m_A 310 HQLISTVQSTID-PACSSIDVIQQAFPMGSMTGAPKVNVMKFIDRIESMARGPFSGTVGYMDPHDNFDFNVLIRSIFYNS 388 (436) T ss_dssp EEEEEEEEEEBC-TTSCHHHHHHHTCSCGGGSEESHHHHHHHHHHHSSSBCTTTTCEEEEECTTSCEEEECCCSEEEEET T ss_pred EEEEEEEEEECC-CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEECCEEEEEC T ss_conf 130068875317-7788789998438875578997799999999857999987388999991899879999933599969 Q ss_pred C--EEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHH Q ss_conf 8--89999731770268878999999999999999848782331 Q T0599 355 N--TLRLYAGAGVVAESKPEDELAETSAKFQTMLKALGLNDSSL 396 (399) Q Consensus 355 ~--~~~l~AGaGIv~~S~p~~E~~Et~~K~~~ll~alg~~~~~~ 396 (399) + +++++||||||+||+|++||+||.+|+++||++|..+++-- T Consensus 389 ~~~~l~~~aG~GIv~~S~pe~E~~Et~~K~~~ll~~l~~~eg~~ 432 (436) T 3h9m_A 389 ATQELFMEAGSAITSYAKAETEYEECLLKITPMIHILNNQEGHH 432 (436) T ss_dssp TTTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHTC------ T ss_pred CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 93299998658994999957999999999999999986562877 No 7 >2fn0_A Salicylate synthetase, IRP9; salicylate synthase, siderophore, transcription; 1.85A {Yersinia enterocolitica} SCOP: d.161.1.1 PDB: 2fn1_A* Probab=100.00 E-value=0 Score=605.50 Aligned_cols=338 Identities=24% Similarity=0.331 Sum_probs=283.6 Q ss_pred EEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCC Q ss_conf 56611221576730133337762463223444406888899846787089965257664310001354455665553112 Q T0599 36 EGEFTTVKHHEIESFPELVQAVLRNAKQAGNPNPIVVGALPFDRRKEVQLIVPEYSRISERLQLDPTNHLEINRNLTFEM 115 (399) Q Consensus 36 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fD~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (399) .|+++|+....++.++.. .++.|+..+.+....++|||........... ......................+ T Consensus 98 ~G~~~fd~~~~~e~~~~~------~~~~P~~~l~~p~~~i~~d~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~p~~~ 169 (437) T 2fn0_A 98 YGQVGFNFAAHARGIAFN------AGEWPLLTLTVPREELIFEKGNVTVYADSAD--GCRRLCEWVKEASTTTQNAPLAV 169 (437) T ss_dssp EEEECTHHHHHHHTCCCC------CCSSCSEEEEECSEEEEEETTEEEEECC-----------------------CBCCC T ss_pred EEEEECHHHHHHCCCCCC------CCCCCCEEEEEEEEEEEEECCEEEEEEECHH--HHHHHHHHHHCCCCCCCCCCCCC T ss_conf 999942044551568898------8999648999611999999998799994650--79999999852467878898644 Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEC Q ss_conf 56889899999999999998629950687535899962799998999999997389834998854766667862799627 Q T0599 116 TPVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKHGYTFAVNLPKDENENSKTLIGAS 195 (399) Q Consensus 116 ~~~~~~~~y~~~v~~~~~~I~~Gd~~kvvLsr~~~~~~~~~~d~~~~~~~L~~~~p~~y~f~~~~~~~~~~~~~~~~gaS 195 (399) .+.+++++|.++|++++++|++|+++||||||++.++ .++|++.+|.+|+..||++|+|++++++ ..|+|+| T Consensus 170 ~~~~~~e~y~~~V~~a~~~I~~G~l~KVVLSr~~~~~--~~~~~~~~~~~l~~~~p~~~~f~~~~~~------~~~iGaS 241 (437) T 2fn0_A 170 DTALNGEAYKQQVARAVAEIRRGEYVKVIVSRAIPLP--SRIDMPATLLYGRQANTPVRSFMFRQEG------REALGFS 241 (437) T ss_dssp CTTTTHHHHHHHHHHHHHHHHTTSCSEEEEEEEEECS--SCCCHHHHHHHHHHTCCCSEEEEEEETT------EEEEEEE T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC--CCCCHHHHHHHHHHCCCCCCEEEEECCC------CEEEEEC T ss_conf 3779999999999999999977996199957473666--7799899999987308997013353589------9899827 Q ss_pred CCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC--CCCEECCCCCCCCCCC Q ss_conf 83006774887999863677889779899999999985071000356899999999888645--8522155432022673 Q T0599 196 PELLVSRHGMQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHEHAVVVEAVAAALRPYC--HTLYVPEKPSVIHSEA 273 (399) Q Consensus 196 PE~l~~~~~~~v~t~plaGT~~r~~~~~~D~~~~~~Ll~s~Ke~~Eh~mvvd~ir~~L~~~c--~sv~v~~~~~i~~~~~ 273 (399) ||+|++++++++.|+|||||+||+.++++|..++++|++|+||++||.||||++||||+++| ++|.|++.+.++++++ T Consensus 242 PE~L~~~~~~~v~T~pLAGT~~r~~~~~~d~~~~~~Ll~~~Ke~~Eh~mvVd~~~~~l~~~~~~~sv~v~~~~~v~~~~~ 321 (437) T 2fn0_A 242 PELVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHDSKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRGS 321 (437) T ss_dssp CSEEEEEETTEEEECCEEEEEECCSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHBCTTCCEEEEEEEEEEETT T ss_pred HHHHEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEECCCEEE T ss_conf 04514798998999877888777777067799999987524377899999999885421435577254011010121228 Q ss_pred EEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEE Q ss_conf 46899999999638899989999984888765888779999999986389996303335765289872104635677789 Q T0599 274 MWHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPFDREFFTGMLGWSDLNGDGEWIVTIRCAEVQ 353 (399) Q Consensus 274 v~HL~s~v~g~L~~~~~~~~~ll~~l~Pt~av~G~Pk~~A~~~I~~lE~~~Rg~Y~G~vG~~~~~G~~~~~V~IRsa~~~ 353 (399) ||||+|+|+|+|+ ++.+.+|+++++||||||||+||.+||++|+++|+++||+|||+|||++ +|+++++|+|||++++ T Consensus 322 v~HL~s~i~g~l~-~~~~~~~~l~al~Pt~av~G~Pk~~A~~~I~~~E~~~Rg~Y~G~vG~~~-~g~~~~~v~IRs~~~~ 399 (437) T 2fn0_A 322 VQHLGSGVSGQLA-ENKDAWDAFTVLFPSITASGIPKNAALNAIMQIEKTPRELYSGAILLLD-DTRFDAALVLRSVFQD 399 (437) T ss_dssp EEEEEEEEEEEBC-TTCCHHHHHHHHCSCGGGSEESHHHHHHHHHHHCCSCCTTTTCEEEEEE-TTEEEEEECCSEEEEC T ss_pred EEEEEEEEEEEEC-CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEE-CCCEEEEEEEEEEEEE T ss_conf 9999999999978-9998788898509998657986699999999863999865278999997-8961899985489998 Q ss_pred CCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCC Q ss_conf 88899997317702688789999999999999998487 Q T0599 354 ENTLRLYAGAGVVAESKPEDELAETSAKFQTMLKALGL 391 (399) Q Consensus 354 ~~~~~l~AGaGIv~~S~p~~E~~Et~~K~~~ll~alg~ 391 (399) +++++++||||||++|+|++||+||++|+++||++|-+ T Consensus 400 ~~~~~l~AGaGIv~~S~Pe~E~~Et~~K~~~il~~L~~ 437 (437) T 2fn0_A 400 SQRCWIQAGAGIIAQSTPERELTETREKLASIAPYLMV 437 (437) T ss_dssp SSCEEEEEEEEECTTCCHHHHHHHHHHHHTTTGGGCBC T ss_pred CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC T ss_conf 99999997369938888579999999999999997649 No 8 >3bzm_A Menaquinone-specific isochorismate synthase; isomerase, menaquinone biosynthesis; HET: CIT; 1.95A {Escherichia coli} SCOP: d.161.1.1 PDB: 2eua_A* 3bzn_A Probab=100.00 E-value=0 Score=594.31 Aligned_cols=317 Identities=27% Similarity=0.418 Sum_probs=278.4 Q ss_pred CCCEEEEEEEEEECCCCEEEEEECHH-------------------------HHHHHHH-CCCCCCCCCCCCCCCCCCCCC Q ss_conf 44406888899846787089965257-------------------------6643100-013544556655531125688 Q T0599 66 NPNPIVVGALPFDRRKEVQLIVPEYS-------------------------RISERLQ-LDPTNHLEINRNLTFEMTPVP 119 (399) Q Consensus 66 ~~~~~~~~~i~fD~~~~~~l~v~~~~-------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 119 (399) ...+.++|.+.||+.. ..+++|+.. ....... .....+.+............| T Consensus 89 ~~~~~~~G~~~Fd~~~-~~~~lP~~~l~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~ 167 (431) T 3bzm_A 89 HADLRIWGLNAFDPSQ-GNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTTTREQHWP 167 (431) T ss_dssp CTTCCEEEEECSSTTC-EEEEEEEEEEEEETTEEEEEEEEEESSCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEES T ss_pred CCCCEEEEEEEECCCC-CEEEEEEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC T ss_conf 7894899984145877-679950799999899999999955764056899999999974255789998877654214699 Q ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCEE Q ss_conf 98999999999999986299506875358999627999989999999973898349988547666678627996278300 Q T0599 120 DHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKHGYTFAVNLPKDENENSKTLIGASPELL 199 (399) Q Consensus 120 ~~~~y~~~v~~~~~~I~~Gd~~kvvLsr~~~~~~~~~~d~~~~~~~L~~~~p~~y~f~~~~~~~~~~~~~~~~gaSPE~l 199 (399) ++++|++.|++++++|++|+++||||||++.+++..++|++.+|++|+..||++|+|++.++. +.+|+|+|||+| T Consensus 168 ~~~~~~~~V~~a~~~I~~G~~~KvVLaR~~~l~~~~~~~~~~~l~~l~~~~p~~y~f~~~~~~-----~~~fiGaSPE~l 242 (431) T 3bzm_A 168 DKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLNLNCYHFYMAFDG-----ENAFLGSSPERL 242 (431) T ss_dssp CHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEEESSCCCHHHHHHHHHHHSCSSEEEEEECSS-----SEEEEEEECCEE T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCC-----CCEEEEECHHHH T ss_conf 999999999999999983991299838888876699999999999988639996299999599-----979999084475 Q ss_pred EEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEE Q ss_conf 67748879998636778897798999999999850710003568999999998886458522155432022673468999 Q T0599 200 VSRHGMQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHEHAVVVEAVAAALRPYCHTLYVPEKPSVIHSEAMWHLST 279 (399) Q Consensus 200 ~~~~~~~v~t~plaGT~~r~~~~~~D~~~~~~Ll~s~Ke~~Eh~mvvd~ir~~L~~~c~sv~v~~~~~i~~~~~v~HL~s 279 (399) ++++++++.|+|||||++||.++.+|..++++|++|+||++||.||||+++|+|+++|.++.|.. +.++++++|+||+| T Consensus 243 ~~~~~~~l~t~~lAGT~~rg~~~~~d~~l~~~Ll~s~Ke~~Eh~~vvd~i~~~L~~~~~~~~v~~-~~~~~~~~v~HL~s 321 (431) T 3bzm_A 243 WRRRDKALRTEALAGTVANNPDDKQAQQLGEWLMADDKNQRENMLVVEDICQRLQADTQTLDVLP-PQVLRLRKVQHLRR 321 (431) T ss_dssp EEEETTEEEEEEEEEEEECCSSHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHTTBSCCEECC-CEEEECSSEEEEEE T ss_pred HEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE-EEEEEEEEEEEEEE T ss_conf 38988889997118958899896999999998733941366666759997644136787527850-05899814998999 Q ss_pred EEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCEEEE Q ss_conf 99999638899989999984888765888779999999986389996303335765289872104635677789888999 Q T0599 280 EVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPFDREFFTGMLGWSDLNGDGEWIVTIRCAEVQENTLRL 359 (399) Q Consensus 280 ~v~g~L~~~~~~~~~ll~~l~Pt~av~G~Pk~~A~~~I~~lE~~~Rg~Y~G~vG~~~~~G~~~~~V~IRsa~~~~~~~~l 359 (399) .|+|+|+ ++ +.++++.++||||||||+||.+||++|+++|+++||||||+|||++.+| +||+|+|||++++++++++ T Consensus 322 ~i~~~l~-~~-~~~~~l~~lhPtpaV~G~Pk~~A~~~I~~~E~~~Rg~YaG~vG~~~~~~-~ef~V~IRsa~~~~~~~~l 398 (431) T 3bzm_A 322 CIWTSLN-KA-DDVICLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQ-SEFCVSLRSAKISGNVVRL 398 (431) T ss_dssp EEEEEBS-SC-CHHHHHHHHSSCTTTTEESHHHHHHHHHHHCSSCCTTTTSEEEEECSSE-EEEEECCSEEEEETTEEEE T ss_pred EEEEEEC-CC-CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCC-CEEEEEEEEEEEECCEEEE T ss_conf 9999968-88-8599998739988505731899999999966999865589999997899-9999994589999999999 Q ss_pred EECCEEECCCCHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 973177026887899999999999999984878 Q T0599 360 YAGAGVVAESKPEDELAETSAKFQTMLKALGLN 392 (399) Q Consensus 360 ~AGaGIv~~S~p~~E~~Et~~K~~~ll~alg~~ 392 (399) |||||||+||+|++||+||++|+++|+++|.++ T Consensus 399 ~AGaGIV~~S~p~~E~~Et~~K~~~~~~~L~~e 431 (431) T 3bzm_A 399 YAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME 431 (431) T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHHHTTTC-- T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC T ss_conf 970389589886899999999999999986569 No 9 >3gse_A Menaquinone-specific isochorismate synthase; MENF,yersinia pestis CO92, YPO2528, csgid, isomerase; 2.28A {Yersinia pestis} Probab=100.00 E-value=0 Score=583.54 Aligned_cols=276 Identities=26% Similarity=0.395 Sum_probs=260.9 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC Q ss_conf 55311256889899999999999998629950687535899962799998999999997389834998854766667862 Q T0599 110 NLTFEMTPVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKHGYTFAVNLPKDENENSK 189 (399) Q Consensus 110 ~~~~~~~~~~~~~~y~~~v~~~~~~I~~Gd~~kvvLsr~~~~~~~~~~d~~~~~~~L~~~~p~~y~f~~~~~~~~~~~~~ 189 (399) .........|++++|.+.|++++++|++|+++||||||++.+++..++|++.+|++|+..||++|+|++.+++. . T Consensus 179 ~~~~~~~~~p~~~~~~~~V~~a~~~I~~G~l~KVVLaR~~~~~~~~~~~~~~~l~~L~~~~p~~y~f~~~~~~~-----~ 253 (458) T 3gse_A 179 ARIQHSSHTPGYPQWRNLIQQALNDIEQQKLDKVVLARTTTLTLNKPLSCAAFMAASRQVNHRCYHFMLRFDDR-----Q 253 (458) T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEEEEEEEEESSCCCHHHHHHHHHHHCTTCEEEEEESSSS-----E T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC-----C T ss_conf 53322147999999999999999999769806999778999647999999999998641299963999932567-----6 Q ss_pred EEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC Q ss_conf 79962783006774887999863677889779899999999985071000356899999999888645852215543202 Q T0599 190 TLIGASPELLVSRHGMQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHEHAVVVEAVAAALRPYCHTLYVPEKPSVI 269 (399) Q Consensus 190 ~~~gaSPE~l~~~~~~~v~t~plaGT~~r~~~~~~D~~~~~~Ll~s~Ke~~Eh~mvvd~ir~~L~~~c~sv~v~~~~~i~ 269 (399) .|+|+|||+|++++++++.|+|||||++|+.++.+|..++++|++|+||++||.||||.|+++|+++|..+.|.. +.++ T Consensus 254 ~fiGaSPE~L~~~~~~~l~T~alAGT~~rg~~~~~d~~l~~~Ll~s~Ke~~Eh~~Vvd~I~~~L~~~~~~~~v~~-~~i~ 332 (458) T 3gse_A 254 AFLGSSPERLYLRQQLHLETEALAGTVSNLDSDPQAAVLADWLMHDEKNQRENLLVVDDICQRLQGGVTAVDVMP-PEII 332 (458) T ss_dssp EEEEEECCEEEEEETTEEEEEEEEEEEECCSSHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHGGGEEEEEECC-CEEE T ss_pred EEEECCHHHEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE-EEEE T ss_conf 799467578089869963703789852378790677776543321014432135777876755148776665420-5788 Q ss_pred CCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEE Q ss_conf 26734689999999963889998999998488876588877999999998638999630333576528987210463567 Q T0599 270 HSEAMWHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPFDREFFTGMLGWSDLNGDGEWIVTIRC 349 (399) Q Consensus 270 ~~~~v~HL~s~v~g~L~~~~~~~~~ll~~l~Pt~av~G~Pk~~A~~~I~~lE~~~Rg~Y~G~vG~~~~~G~~~~~V~IRs 349 (399) ++++|+||+|.|+|+|+ ++ +.++++.+|||||||||+||.+||++|+++|+++||||||++||++. |++||+|+||| T Consensus 333 ~~~~v~HL~t~i~g~l~-~~-~~~~~l~~LhPtpAV~G~Pk~~A~~~I~~~E~~~Rg~YaG~iG~i~~-~~~ef~V~IRs 409 (458) T 3gse_A 333 RLRKVQHLRRRICAQLS-RA-SDTDCLQRLQPTAAVAGLPREAARQFIAKHELFSRGWYAGSAGYLSL-KRTEFSVALRS 409 (458) T ss_dssp ECSSEEEEEEEEEEEES-SC-CHHHHHHHHSSCHHHHEESHHHHHHHHHHHCCSCCTTTTSEEEEECS-SEEEEEECCSE T ss_pred EECCCCEEEEEEEEEEE-CC-CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEC-CCCEEEEECCE T ss_conf 62000048888988992-46-56778986189771788867999999998659998761668999968-99889999551 Q ss_pred EEEECCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHH Q ss_conf 778988899997317702688789999999999999998487823 Q T0599 350 AEVQENTLRLYAGAGVVAESKPEDELAETSAKFQTMLKALGLNDS 394 (399) Q Consensus 350 a~~~~~~~~l~AGaGIv~~S~p~~E~~Et~~K~~~ll~alg~~~~ 394 (399) |+++++++++|||||||++|+|+.||+||.+|+++|+++|..+.. T Consensus 410 a~i~~~~~~l~aGaGIv~~S~p~~E~~Et~~K~~~l~~~L~~~~~ 454 (458) T 3gse_A 410 ARVDGQQIHLYAGAGIVAGSDAEQEWQEIDNKSAGLQSLLEHEAQ 454 (458) T ss_dssp EEEETTEEEEEEEEEECTTCCHHHHHHHC------CGGGSEEC-- T ss_pred EEEECCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 999899999998679948988378999999999999999853546 No 10 >1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Probab=31.22 E-value=15 Score=15.25 Aligned_cols=19 Identities=11% Similarity=0.057 Sum_probs=8.2 Q ss_pred CCCCCCEEEEEEEEEEEEC Q ss_conf 0226734689999999963 Q T0599 268 VIHSEAMWHLSTEVKGELK 286 (399) Q Consensus 268 i~~~~~v~HL~s~v~g~L~ 286 (399) +.+++.|.--...+.-+|+ T Consensus 254 i~~lP~Ltf~~~G~~ftL~ 272 (329) T 1htr_B 254 IQNLPSLTFIINGVEFPLP 272 (329) T ss_dssp GGGSCCEEEEETTEEEEEC T ss_pred HHCCCCEEEEECCEEEEEC T ss_conf 4008977999899999888 Done!