Query         T0603 CRISPR associated protein Cas1 , E.coli, 305 residues
Match_columns 305
No_of_seqs    207 out of 468
Neff          6.3 
Searched_HMMs 22458
Date          Mon Jul  5 09:02:21 2010
Command       /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0603.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0603.hhr 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3god_A CAS1; crispr, metallonu 100.0       0       0  521.1  26.4  269    5-278    12-327 (328)
  2 3lfx_A Uncharacterized protein 100.0       0       0  369.6  23.2  237   15-256     1-276 (319)
  3 2yzs_A Putative uncharacterize 100.0       0       0  359.9  28.2  254   17-275     3-303 (315)
  4 1jqo_A Phosphoenolpyruvate car  58.4    0.73 3.2E-05   24.0  -1.7   46  156-201   221-273 (970)
  5 2hbp_A Cytoskeleton assembly c  48.5      12 0.00051   16.2   4.3   31   20-50     17-47  (68)
  6 2ioj_A Hypothetical protein AF  47.3      12 0.00054   16.1   3.4   54   28-81     51-107 (139)
  7 2cev_A Protein (arginase); enz  42.4      14 0.00064   15.6   3.3   33   51-83     92-126 (299)
  8 1xfk_A Formimidoylglutamase; f  38.6      16 0.00073   15.2   3.4   34   50-83    119-161 (336)
  9 1jqn_A Pepcase, PEPC, phosphoe  38.5     1.1   5E-05   22.8  -3.4   33  158-190   184-216 (883)
 10 2wdq_A Succinate dehydrogenase  37.5      17 0.00076   15.1   2.8   43   35-79    184-237 (588)
 11 1d4d_A Flavocytochrome C fumar  35.7      18 0.00081   14.9   2.9   38   44-82    122-159 (572)
 12 1pq3_A Arginase II, mitochondr  34.7      19 0.00083   14.8   3.7   33   51-83     90-124 (306)
 13 3m1r_A Formimidoylglutamase; s  31.2      21 0.00095   14.5   2.9   31   52-82    124-156 (322)
 14 2a0m_A Arginase superfamily pr  30.7      22 0.00097   14.4   3.6   34   50-83    114-150 (316)
 15 2ef5_A Arginase; TTHA1496, str  30.4      22 0.00098   14.4   3.7   32   51-82     89-121 (290)
 16 1gq6_A Proclavaminate amidino   29.3      23   0.001   14.3   2.5   32   51-82    114-147 (313)
 17 2aeb_A Arginase 1; hydrolase,   27.7      25  0.0011   14.1   4.0   34   50-83     93-128 (322)
 18 1woh_A Agmatinase; alpha/beta   27.2      21 0.00092   14.6   1.6   31   52-82    115-146 (305)
 19 3cs3_A Sugar-binding transcrip  23.4      29  0.0013   13.6   4.8   50   31-81     40-89  (277)
 20 1y0p_A Fumarate reductase flav  21.6      32  0.0014   13.4   3.1   39   43-82    121-159 (571)
 21 2nml_A Enhancer of rudimentary  20.2      28  0.0012   13.7   1.1   17  210-226    45-61  (104)

No 1  
>3god_A CAS1; crispr, metallonuclease, DNAse, prokaryotic immune system, immune system; 2.17A {Pseudomonas aeruginosa}
Probab=100.00  E-value=0  Score=521.07  Aligned_cols=269  Identities=23%  Similarity=0.352  Sum_probs=244.8

Q ss_pred             CCCCCCCCCCCCEEEEEEEEEEEECCEEEEEECCCEE---EECCCCCCCEEEECCCCEECHHHHHHHHHCCCEEEEECCC
Q ss_conf             7522302047526888743899857789998768657---8616100356686177303688999999759889998898
Q T0603             5 PLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIR---THIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEA   81 (305)
Q Consensus         5 p~~~i~~~dr~s~lYle~g~i~~~~~~l~i~~~~g~~---~~IPi~~i~~IlL~~gvsIT~~al~~la~~Gi~V~f~g~~   81 (305)
                      ++|+|||+||+++||+|+|+|.++||++++++++|..   ++||+++|++|+|+|||+|||+||++|+++||+|+|||++
T Consensus        12 ~~~~i~~~~r~~~lyle~~~l~~~~~~~~~~~~~g~~~~~~~IPi~~v~~Ill~~g~siS~~al~~la~~gi~v~f~~~~   91 (328)
T 3god_A           12 ELKTILHSKRANLYYLQHCRVLVNGGRVEYVTDEGRHSHYWNIPIANTTSLLLGTGTSITQAAMRELARAGVLVGFCGGG   91 (328)
T ss_dssp             HHHHHHHHTCCEEEEECSEEEEEETTEEEEEEEETTEEEEEECCGGGEEEEEECTTEEEEHHHHHHHHHTTCEEEEECST
T ss_pred             HCCHHHHHHCCCEEEEEEEEEEEECCEEEEEECCCCCEEEEEECHHHCCEEEECCCCEECHHHHHHHHHCCCEEEEECCC
T ss_conf             50053253012179998659999789899997488600368725788658997399657699999999869879998899


Q ss_pred             CCEEEECC-----------CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC-----------------------
Q ss_conf             70655127-----------77764089999999983598899999999999751001-----------------------
Q T0603            82 GVRVYASG-----------QPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEP-----------------------  127 (305)
Q Consensus        82 G~~~y~~~-----------~~~~~~~~~l~~Q~~~~~d~~~RL~vAR~m~~~R~~~~-----------------------  127 (305)
                      |+|+|+..           +..++++.++++|+++|+|+++||.+||+||..|+.+.                       
T Consensus        92 G~~~~~~~~~~~~~~~l~~~~~~r~~~~~~~Q~~~~~d~~~rl~iAr~~v~~ki~n~~~~l~~~~~~r~~~~~~~~~~~~  171 (328)
T 3god_A           92 GTPLFSANEVDVEVSWLTPQSEYRPTEYLQRWVGFWFDEEKRLVAARHFQRARLERIRHSWLEDRVLRDAGFAVDATALA  171 (328)
T ss_dssp             TCCSEEETTEEESEEEEEESSSCCCSHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHTTCCCCHHHHH
T ss_pred             CCEEEEECCCCCCCCEECCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             82667732477776422445530217999999998359788999999999999998999998888876402354679999


Q ss_pred             ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             ---------42341089885167999999999999871885345247888888565366899999999999999999970
Q T0603           128 ---------APARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAA  198 (305)
Q Consensus       128 ---------~~~~~sie~LrG~EG~~ar~yy~~~a~~~~~~~~gR~~~r~~~~~~DpvNa~LS~gyslLy~~~~~aI~~~  198 (305)
                               ++...++++|||+||+++|.||+.+++.++.+|++|   ++++|+.||+|++|||||+|||+.|++||+++
T Consensus       172 ~~l~~~~~~l~~~~~~~~LrG~EG~aak~Yf~~~~~~~~~~~f~r---r~r~p~~DpvNa~Ls~gYtlLy~~v~~Al~~~  248 (328)
T 3god_A          172 VAVEDSARALEQAPNHEHLLTEEARLSKRLFKLAAQATRYGEFVR---AKRGSGGDPANRFLDHGNYLAYGLAATATWVL  248 (328)
T ss_dssp             HHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHTTCCSCCC---CSTTCCCSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999998761798889999999999999999876233576677---78899997477999999999999999999974


Q ss_pred             CCCCCCEEEECCCCC-CEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             888431256648987-5130005553356667899998614877724899999999998620789999999998368877
Q T0603           199 GYAPAIGFVHTGKPL-SFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEI  277 (305)
Q Consensus       199 Gl~P~lGflH~g~~~-Slv~DiADlfK~~i~~p~aF~~~~~~~~~~e~~~R~~~r~~~~~~~~l~~~i~~i~~ll~~~~~  277 (305)
                      ||||++||+|++..+ ||||||||+|||++|+|+||++++++  ++|+++|++||+.|++.+++++||++||+++.....
T Consensus       249 GLdP~lGflH~~~~r~SLvlDladlfK~~iv~p~aF~~~~~~--~~~~~~R~~~~~~~~~~~~~~~m~~~l~~~~~~~~~  326 (328)
T 3god_A          249 GIPHGLAVLHGKTRRGGLVFDVADLIKDSLILPQAFLSAMRG--DEEQDFRQACLDNLSRAQALDFMIDTLKDVAQRSTV  326 (328)
T ss_dssp             TCCTTCCSSSTTTCTTHHHHHHHTTTTTTTHHHHHHHHHHHT--CCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHCHHHCCHHHHHHHHCC--CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC
T ss_conf             999761233589998644887898721020169899998638--935999999999999703499999999999740136


Q ss_pred             C
Q ss_conf             7
Q T0603           278 Q  278 (305)
Q Consensus       278 ~  278 (305)
                      +
T Consensus       327 ~  327 (328)
T 3god_A          327 S  327 (328)
T ss_dssp             -
T ss_pred             C
T ss_conf             8


No 2  
>3lfx_A Uncharacterized protein; CAS1, DNAse, prokaryotic immune system, structural genomics, PSI-2, protein structure initiative; 2.70A {Thermotoga maritima}
Probab=100.00  E-value=0  Score=369.62  Aligned_cols=237  Identities=19%  Similarity=0.225  Sum_probs=204.9

Q ss_pred             CCEEEE-EEEEEEEECCEEEEEECCCEEEECCCCCCCEEEECCCCEECHHHHHHHHHCCCEEEEECCCCCEEEECCCCC-
Q ss_conf             526888-743899857789998768657861610035668617730368899999975988999889870655127777-
Q T0603            15 VSMIFL-QYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPG-   92 (305)
Q Consensus        15 ~s~lYl-e~g~i~~~~~~l~i~~~~g~~~~IPi~~i~~IlL~~gvsIT~~al~~la~~Gi~V~f~g~~G~~~y~~~~~~-   92 (305)
                      |+.||+ ++|+|.+++|++++.+++++ ..||+++|+.|+++|+++||++||+.|+++||+|+||+++|.+.+...++. 
T Consensus         1 M~tlyi~~~g~l~~~~~~l~i~~~~~~-~~iP~~~i~~ivi~g~v~ist~al~~l~~~~I~v~f~~~~G~~~g~~~p~~~   79 (319)
T 3lfx_A            1 MESVYLFSSGTLKRKANTICLETESGR-KYIPVENVMDIKVFGEVDLNKRFLEFLSQKRIPIHFFNREGYYVGTFYPREY   79 (319)
T ss_dssp             CEEEEECSCEEEEECSSEEEEECSSCE-EEEECTTEEEEEECSCEEEEHHHHHHHHHTTCCEEEECTTCCEEEEEEECCS
T ss_pred             CCEEEECCCCEEEEECCEEEEEECCCE-EEECHHHCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEECCCC
T ss_conf             923997738589998898999978953-8876788488999689718899999999879979999999978999946778


Q ss_pred             CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH--------------------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             640899999999835988999999999997510--------------------014234108988516799999999999
Q T0603            93 GARSDKLLYQAKLALDEDLRLKVVRKMFELRFG--------------------EPAPARRSVEQLRGIEGSRVRATYALL  152 (305)
Q Consensus        93 ~~~~~~l~~Q~~~~~d~~~RL~vAR~m~~~R~~--------------------~~~~~~~sie~LrG~EG~~ar~yy~~~  152 (305)
                      ..++.++++|++.|.|+++|+.+||+|+..|+.                    +++.++.++++|||+||.+++.||..+
T Consensus        80 ~~~~~~~~~Q~~~~~~~~~~l~iar~ii~~Ki~Nq~~~L~~~~~~~~~l~~~~~~l~~~~~~~~L~giEG~aa~~Yf~~l  159 (319)
T 3lfx_A           80 LNSGFLILKQAEHYINQEKRMLIAREIVSRSFQNMVDFLKKRKVRADSLTRYKKKAEEASNVSELMGIEGNAREEYYSMI  159 (319)
T ss_dssp             CCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSSHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             87599999999983295889999999999999999999998315368999999986617999999888999999999999


Q ss_pred             HHHHC---CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC--CEEECCHHHHHHHH
Q ss_conf             98718---85345247888888565366899999999999999999970888431256648987--51300055533566
Q T0603           153 AKQYG---VTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPL--SFVYDIADIIKFDT  227 (305)
Q Consensus       153 a~~~~---~~~~gR~~~r~~~~~~DpvNa~LS~gyslLy~~~~~aI~~~Gl~P~lGflH~g~~~--Slv~DiADlfK~~i  227 (305)
                      ++.+.   +.|.+|    +++||.||+|++|||||++||+.|.++|+++||||++||+|+++++  |||||++|+|||.+
T Consensus       160 ~~~l~~~~~~f~~R----~~rpp~DpvNa~LsygY~lL~~~~~~al~~~GLdP~iG~lH~~~~~r~sLa~DL~E~fRp~i  235 (319)
T 3lfx_A          160 DSLVSDERFRIEKR----TRRPPKNFANTLISFGNSLLYTTVLSLIYQTHLDPRIGYLHETNFRRFSLNLDIAELFKPAV  235 (319)
T ss_dssp             CCCCSSCC------------CCCCSHHHHHHHHHHHHHHHHHHHHHHTSSCCTTCCSSSCCCSSSCCHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             98547556787887----77999988999999999999999999999839997754013799999407887898841376


Q ss_pred             HHHHHHHHHHCCCCCHH------------HHHHHHHHHHHH
Q ss_conf             67899998614877724------------899999999998
Q T0603           228 VVPKAFEIARRNPGEPD------------REVRLACRDIFR  256 (305)
Q Consensus       228 ~~p~aF~~~~~~~~~~e------------~~~R~~~r~~~~  256 (305)
                      ||.++|.+++++..+++            .+.|+.+.+.|.
T Consensus       236 VD~~v~~l~~~~~i~~~dF~~~~~g~~L~~~~rk~~i~~~~  276 (319)
T 3lfx_A          236 VDRLFLNLVNTRQINEKHFDEISEGLMLNDEGKSLFVKNYE  276 (319)
T ss_dssp             THHHHHHHHTTTCSCGGGEECCSSSCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHCCCCCCEEEECHHHHHHHHHHHH
T ss_conf             99999999972898888731457828988899999999999


No 3  
>2yzs_A Putative uncharacterized protein; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; 2.00A {Aquifex aeolicus}
Probab=100.00  E-value=0  Score=359.93  Aligned_cols=254  Identities=16%  Similarity=0.154  Sum_probs=215.2

Q ss_pred             EEEE-EEEEEEEECCEEEEEECCCEEEECCCCCCCEEEECCCCEECHHHHHHHHHCCCEEEEECCCCCEEEECCCCC-CC
Q ss_conf             6888-743899857789998768657861610035668617730368899999975988999889870655127777-64
Q T0603            17 MIFL-QYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPG-GA   94 (305)
Q Consensus        17 ~lYl-e~g~i~~~~~~l~i~~~~g~~~~IPi~~i~~IlL~~gvsIT~~al~~la~~Gi~V~f~g~~G~~~y~~~~~~-~~   94 (305)
                      .+|+ ++|+|.++++++++++++++ ..||+++|+.|+++|+++||++||+.|+++||+|+||+++|.+.+...++. +.
T Consensus         3 t~yi~~~g~l~~~~~~l~i~~~~~~-~~iP~~~I~~ivi~g~~~ist~al~~l~~~gI~v~f~~~~G~~~g~~~p~~~~~   81 (315)
T 2yzs_A            3 VYYINSHGTLSRHENTLRFENAEVK-KDIPVEDVEEIFVFAELSLNTKLLNFLASKGIPLHFFNYYGYYTGTFYPRESSV   81 (315)
T ss_dssp             EEEECSCEEEEEETTEEEEECSSCE-EEECGGGCSEEEECSCEEEEHHHHHHHHHHTCCEEEECTTSCEEEEEEECCSCC
T ss_pred             EEEEECCCEEEEECCEEEEEECCEE-EEECHHHCCEEEEECCCEECHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCC
T ss_conf             6999138389997899999979989-997168847899958970789999999987997999899997857836866786


Q ss_pred             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             0899999999835988999999999997510--------------01423410898851679999999999998718853
Q T0603            95 RSDKLLYQAKLALDEDLRLKVVRKMFELRFG--------------EPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTW  160 (305)
Q Consensus        95 ~~~~l~~Q~~~~~d~~~RL~vAR~m~~~R~~--------------~~~~~~~sie~LrG~EG~~ar~yy~~~a~~~~~~~  160 (305)
                      ++..+++|++++.|+++++.+||+|+..++.              +++....++++|||+||.+++.||..+++.+++.|
T Consensus        82 ~~~~~~~Q~~~~~~~~~~l~ia~~iv~~Ki~Nq~~~l~~~~~~~~~~~~~~~~i~~l~g~Eg~aa~~Yf~~~~~~~~~~f  161 (315)
T 2yzs_A           82 SGHLLIKQVEHYLDAQKRLYLAKSFVIGSILNLEYVYKISADTYLNKVKETNSIPELMSVEAEFRKLCYKKLEEVTGWEL  161 (315)
T ss_dssp             CHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             79999999998119899999999999999999999999878998888764047889999999999999999998469888


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC--CEEECCHHHHHHHHHHHHHHHHHHC
Q ss_conf             45247888888565366899999999999999999970888431256648987--5130005553356667899998614
Q T0603           161 NGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPL--SFVYDIADIIKFDTVVPKAFEIARR  238 (305)
Q Consensus       161 ~gR~~~r~~~~~~DpvNa~LS~gyslLy~~~~~aI~~~Gl~P~lGflH~g~~~--Slv~DiADlfK~~i~~p~aF~~~~~  238 (305)
                      ++|.++    ||.||+|++|||||++||+.|.++|+++||||++||+|+++++  |||||++|+|||.+|+.++|+++++
T Consensus       162 ~~R~rr----pp~DpvNa~LsygY~lL~~~i~~ai~~~GLdP~iG~lH~~~~~r~sLa~DL~E~fRp~ivD~~v~~l~~~  237 (315)
T 2yzs_A          162 EKRTKR----PPQNPLNALISFGNSLTYAKVLGEIYKTQLNPTVSYLHEPSTKRFSLSLDVAEVFKPIFVDNLIIRLIQE  237 (315)
T ss_dssp             C---------CCCSHHHHHHHHHHHHHHHHHHHHHHTSSCCTTCCSSSCCC--CCHHHHHHHHHHHHHHTHHHHHHHHHT
T ss_pred             CCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             886728----9998789999999999999999999984999764232469999962898889884369799999999871


Q ss_pred             CCCCHH------------HHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHCCC
Q ss_conf             877724------------89999999999862-----------------07899999999983688
Q T0603           239 NPGEPD------------REVRLACRDIFRSS-----------------KTLAKLIPLIEDVLAAG  275 (305)
Q Consensus       239 ~~~~~e------------~~~R~~~r~~~~~~-----------------~~l~~~i~~i~~ll~~~  275 (305)
                      +..+++            .+.|+.+...|.+.                 +++..-+..+..-|..+
T Consensus       238 ~~i~~~dF~~~~~~~~L~~~~rk~~i~~~e~~l~~~i~~~~~~~~~s~~~~i~~qa~~l~~~l~~~  303 (315)
T 2yzs_A          238 NKIDKTHFSTELNMTFLNEIGRKVFLKAFNELLETTIFYPKLNRKVSHRTLIKLELYKLIKHLLEE  303 (315)
T ss_dssp             TSSCGGGEEEETTEEEECHHHHHHHHHHHHHHHHCEEEEGGGTEEEEHHHHHHHHHHHHHHHHTTS
T ss_pred             CCCCHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             898877740207808888999999999999997423015567840229999999999999997499


No 4  
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=58.41  E-value=0.73  Score=24.03  Aligned_cols=46  Identities=7%  Similarity=0.011  Sum_probs=30.6

Q ss_pred             HCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-------HHHHHHHHHHHHCCCC
Q ss_conf             188534524788888856536689999999-------9999999999970888
Q T0603           156 YGVTWNGRRYDPKDWEKGDTINQCISAATS-------CLYGVTEAAILAAGYA  201 (305)
Q Consensus       156 ~~~~~~gR~~~r~~~~~~DpvNa~LS~gys-------lLy~~~~~aI~~~Gl~  201 (305)
                      ...-|.....++.++.+.|.+...|+|-..       -+|.....++...+.+
T Consensus       221 I~~LW~T~elR~~KPtv~DE~~ngL~y~~~tl~~avP~l~~~l~~al~~~~~~  273 (970)
T 1jqo_A          221 IQAAFRTDEIRRAQPTPQAEMRYGMSYIHETVWKGVPKFLRRVDTALKNIGIN  273 (970)
T ss_dssp             HHHHHHSCCSCCSCCCHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHTTTCC
T ss_pred             HHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99986642331259898999999999999999999999999999999863888


No 5  
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=48.47  E-value=12  Score=16.21  Aligned_cols=31  Identities=13%  Similarity=0.282  Sum_probs=26.5

Q ss_pred             EEEEEEEEECCEEEEEECCCEEEECCCCCCC
Q ss_conf             8743899857789998768657861610035
Q T0603            20 LQYGQIDVIDGAFVLIDKTGIRTHIPVGSVA   50 (305)
Q Consensus        20 le~g~i~~~~~~l~i~~~~g~~~~IPi~~i~   50 (305)
                      +|---|...++.+.+...+|....||++.++
T Consensus        17 veA~fv~~~~~~V~L~~~nG~~i~vpl~~LS   47 (68)
T 2hbp_A           17 VDAEFIGCAKGKIHLHKANGVKIAVAADKLS   47 (68)
T ss_dssp             EEEEEEEEETTEEEEECTTSCEEEEETTSBC
T ss_pred             EEEEEEEEECCEEEEEECCCEEEEEEHHHCC
T ss_conf             9999999869999999739979996859979


No 6  
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=47.30  E-value=12  Score=16.10  Aligned_cols=54  Identities=13%  Similarity=0.205  Sum_probs=38.1

Q ss_pred             ECCEEEEEECCCEEEECCC---CCCCEEEECCCCEECHHHHHHHHHCCCEEEEECCC
Q ss_conf             5778999876865786161---00356686177303688999999759889998898
Q T0603            28 IDGAFVLIDKTGIRTHIPV---GSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEA   81 (305)
Q Consensus        28 ~~~~l~i~~~~g~~~~IPi---~~i~~IlL~~gvsIT~~al~~la~~Gi~V~f~g~~   81 (305)
                      .++.+++...+-.......   ..+++|+|-+|..++...++.+-+.|++|.-+..+
T Consensus        51 ~~~~lvv~~gdR~di~l~al~~~~~~~iIlTgg~~p~~~i~~la~~~gipvl~t~~d  107 (139)
T 2ioj_A           51 ARNAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVPVILTGHD  107 (139)
T ss_dssp             CSSEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCCEEECSSC
T ss_pred             CCCEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCC
T ss_conf             897189995883899999985789619999499997999999998679948993788


No 7  
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A*
Probab=42.40  E-value=14  Score=15.61  Aligned_cols=33  Identities=12%  Similarity=0.191  Sum_probs=27.9

Q ss_pred             EEEECCCCEECHHHHHHHHHC--CCEEEEECCCCC
Q ss_conf             668617730368899999975--988999889870
Q T0603            51 CIMLEPGTRVSHAAVRLAAQV--GTLLVWVGEAGV   83 (305)
Q Consensus        51 ~IlL~~gvsIT~~al~~la~~--Gi~V~f~g~~G~   83 (305)
                      .|+|||..++|-+.++.+++.  .+.|+|++.+.-
T Consensus        92 pi~lGGdHsit~~~~~a~~~~~~~~~vI~~DAH~D  126 (299)
T 2cev_A           92 PLVLGGDHSIAIGTLAGVAKHYERLGVIWYDAHGD  126 (299)
T ss_dssp             EEEEESSGGGHHHHHHHHHTTCSSEEEEEESSBCC
T ss_pred             EEEECCCCCCCCCCCCCHHCCCCCEEEEEECCCCC
T ss_conf             68825776413343211010377604998503577


No 8  
>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} SCOP: c.42.1.1
Probab=38.61  E-value=16  Score=15.24  Aligned_cols=34  Identities=18%  Similarity=0.072  Sum_probs=28.2

Q ss_pred             CEEEECCCCEECHHHHHHHHH---------CCCEEEEECCCCC
Q ss_conf             566861773036889999997---------5988999889870
Q T0603            50 ACIMLEPGTRVSHAAVRLAAQ---------VGTLLVWVGEAGV   83 (305)
Q Consensus        50 ~~IlL~~gvsIT~~al~~la~---------~Gi~V~f~g~~G~   83 (305)
                      -.|+|||+.|||-..++.+.+         ..+.|+|++.+.-
T Consensus       119 ~pIvLGGdHsit~~~~~gl~~~~~~~~~~~~~igvI~fDAH~D  161 (336)
T 1xfk_A          119 RAIVLGGGHEIAWATFQGLAQHFLATGVKQPRIGIINFDAHFD  161 (336)
T ss_dssp             CEEEECSSTTHHHHHHHHHHHHHHHTTCCSCCEEEEEECSSCC
T ss_pred             CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf             6389778766622778999986221014578557999646533


No 9  
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=38.46  E-value=1.1  Score=22.83  Aligned_cols=33  Identities=9%  Similarity=0.089  Sum_probs=18.8

Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             853452478888885653668999999999999
Q T0603           158 VTWNGRRYDPKDWEKGDTINQCISAATSCLYGV  190 (305)
Q Consensus       158 ~~~~gR~~~r~~~~~~DpvNa~LS~gyslLy~~  190 (305)
                      .-|.....++.++.+.|.+...|+|--..++..
T Consensus       184 ~LW~T~elR~~KPtv~DE~~~~l~y~~~~l~~~  216 (883)
T 1jqn_A          184 QSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQG  216 (883)
T ss_dssp             HHHHCCCBCSSCCCHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             984671220149999999999999878899998


No 10 
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, tricarboxylic acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A*
Probab=37.50  E-value=17  Score=15.13  Aligned_cols=43  Identities=16%  Similarity=0.125  Sum_probs=24.8

Q ss_pred             EECCCEEEECCCCCCCEEEECCCCE-----------ECHHHHHHHHHCCCEEEEEC
Q ss_conf             8768657861610035668617730-----------36889999997598899988
Q T0603            35 IDKTGIRTHIPVGSVACIMLEPGTR-----------VSHAAVRLAAQVGTLLVWVG   79 (305)
Q Consensus        35 ~~~~g~~~~IPi~~i~~IlL~~gvs-----------IT~~al~~la~~Gi~V~f~g   79 (305)
                      ..++|+...|...  ++||--||..           .|...+....+.|..+.=+.
T Consensus       184 ~~~~g~~~~i~Ak--aVILATGG~~~~~~~~~~~~~~tGdG~~ma~~aGA~l~~mE  237 (588)
T 2wdq_A          184 CIETGEVVYFKAR--ATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDME  237 (588)
T ss_dssp             ETTTCCEEEEEEE--EEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTT
T ss_pred             ECCCCCEEEEECC--EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
T ss_conf             8789978999558--19989999841676635899873199999997797164884


No 11 
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=35.73  E-value=18  Score=14.95  Aligned_cols=38  Identities=16%  Similarity=0.176  Sum_probs=31.2

Q ss_pred             CCCCCCCEEEECCCCEECHHHHHHHHHCCCEEEEECCCC
Q ss_conf             161003566861773036889999997598899988987
Q T0603            44 IPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAG   82 (305)
Q Consensus        44 IPi~~i~~IlL~~gvsIT~~al~~la~~Gi~V~f~g~~G   82 (305)
                      -|-+++++|++|+|.+=..+|++ |+++|..|+.+....
T Consensus       122 ~~~~ttDVvVVGgG~AGL~AAi~-aae~G~~V~llEK~~  159 (572)
T 1d4d_A          122 GVKETTDVVIIGSGGAGLAAAVS-ARDAGAKVILLEKEP  159 (572)
T ss_dssp             CCCEECSEEEECCSHHHHHHHHH-HHSSSCCEEEECSSS
T ss_pred             CCCCCCCEEEECCCHHHHHHHHH-HHHCCCCEEEEECCC
T ss_conf             88988577998957999999999-998899589997899


No 12 
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=34.75  E-value=19  Score=14.85  Aligned_cols=33  Identities=18%  Similarity=0.341  Sum_probs=27.6

Q ss_pred             EEEECCCCEECHHHHHHHHHC--CCEEEEECCCCC
Q ss_conf             668617730368899999975--988999889870
Q T0603            51 CIMLEPGTRVSHAAVRLAAQV--GTLLVWVGEAGV   83 (305)
Q Consensus        51 ~IlL~~gvsIT~~al~~la~~--Gi~V~f~g~~G~   83 (305)
                      .|+|||..++|-..++.+++.  .+.|+|++.+.-
T Consensus        90 pivlGGdHsis~~~~~a~~~~~~~~~vi~~DAH~D  124 (306)
T 1pq3_A           90 CVTLGGDHSLAIGTISGHARHCPDLCVVWVDAHAD  124 (306)
T ss_dssp             EEEEESSGGGHHHHHHHHHTTCTTCEEEEECSSCC
T ss_pred             EEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCC
T ss_conf             26745787654004899997478625999850366


No 13 
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis}
Probab=31.23  E-value=21  Score=14.48  Aligned_cols=31  Identities=16%  Similarity=0.196  Sum_probs=13.4

Q ss_pred             EEECCCCEECHHHHHHHHH--CCCEEEEECCCC
Q ss_conf             6861773036889999997--598899988987
Q T0603            52 IMLEPGTRVSHAAVRLAAQ--VGTLLVWVGEAG   82 (305)
Q Consensus        52 IlL~~gvsIT~~al~~la~--~Gi~V~f~g~~G   82 (305)
                      |+|||..++|-..++.+++  ..+.|+|++.+.
T Consensus       124 ivLGGdhsit~~~~~al~~~~~~i~vI~~DAH~  156 (322)
T 3m1r_A          124 LILGGDNSISYSTIKAIAQTKGTTAVIQFDAHH  156 (322)
T ss_dssp             EEEESCTTHHHHHHHHHHHHHCSEEEEEECSSC
T ss_pred             EEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             998387411478898886126884089986588


No 14 
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1
Probab=30.74  E-value=22  Score=14.42  Aligned_cols=34  Identities=12%  Similarity=-0.029  Sum_probs=27.5

Q ss_pred             CEEEECCCCEECHHHHHHHHHC---CCEEEEECCCCC
Q ss_conf             5668617730368899999975---988999889870
Q T0603            50 ACIMLEPGTRVSHAAVRLAAQV---GTLLVWVGEAGV   83 (305)
Q Consensus        50 ~~IlL~~gvsIT~~al~~la~~---Gi~V~f~g~~G~   83 (305)
                      -.|+|||..+||-..++.+.++   .+.|+|++.+.-
T Consensus       114 ~pivlGGdHsit~~~~~al~~~~~~~~~vI~~DAH~D  150 (316)
T 2a0m_A          114 FPFVIGGGNDQSAPNGRAMLRAFPGDVGVINVDSHLD  150 (316)
T ss_dssp             EEEEEESCGGGHHHHHHHHHHHSTTCCEEEEECSSCC
T ss_pred             EEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             0578625865105666777751577654998344324


No 15 
>2ef5_A Arginase; TTHA1496, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A
Probab=30.42  E-value=22  Score=14.39  Aligned_cols=32  Identities=28%  Similarity=0.279  Sum_probs=26.6

Q ss_pred             EEEECCCCEECHHHHHHHHHC-CCEEEEECCCC
Q ss_conf             668617730368899999975-98899988987
Q T0603            51 CIMLEPGTRVSHAAVRLAAQV-GTLLVWVGEAG   82 (305)
Q Consensus        51 ~IlL~~gvsIT~~al~~la~~-Gi~V~f~g~~G   82 (305)
                      .|+|||+.+||-.+++.+.+. .+.|+|++.+.
T Consensus        89 pi~lGGdHsit~~~~~~~~~~~~igvI~~DAH~  121 (290)
T 2ef5_A           89 PIVLGGDHSLSMGSVAGAARGRRVGVVWVDAHA  121 (290)
T ss_dssp             EEEEESSGGGHHHHHHHHHTTSCCEEEEECSBC
T ss_pred             EEEECCCCCHHHHHHHCCCCCCCEEEEEEECCC
T ss_conf             699668650158998611345870468861464


No 16 
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibiotic; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A
Probab=29.33  E-value=23  Score=14.27  Aligned_cols=32  Identities=19%  Similarity=0.233  Sum_probs=22.7

Q ss_pred             EEEECCCCEECHHHHHHHHHC--CCEEEEECCCC
Q ss_conf             668617730368899999975--98899988987
Q T0603            51 CIMLEPGTRVSHAAVRLAAQV--GTLLVWVGEAG   82 (305)
Q Consensus        51 ~IlL~~gvsIT~~al~~la~~--Gi~V~f~g~~G   82 (305)
                      -|+|||+.|+|-..++.+.+.  .+.|+|++.+.
T Consensus       114 pi~lGGdHsit~~~~~a~~~~~~~lgvI~~DAH~  147 (313)
T 1gq6_A          114 FLMIGGDHSLTVAALRAVAEQHGPLAVVHLDAHS  147 (313)
T ss_dssp             EEEEESCGGGHHHHHHHHHHHHSSEEEEEECSSC
T ss_pred             EEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCC
T ss_conf             3551475542100113467635873599972344


No 17 
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibitor, perfectly twinned crystal; HET: AB5; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 1wvb_A* 3e6v_A* 3e6k_A* 1d3v_A* 1hq5_A* 1hqf_A* 1hqh_A* 1r1o_A* 1rla_A 1hqx_A 3e9b_A* 3e8q_A* 3rla_A ...
Probab=27.69  E-value=25  Score=14.09  Aligned_cols=34  Identities=15%  Similarity=0.241  Sum_probs=27.9

Q ss_pred             CEEEECCCCEECHHHHHHHHHC--CCEEEEECCCCC
Q ss_conf             5668617730368899999975--988999889870
Q T0603            50 ACIMLEPGTRVSHAAVRLAAQV--GTLLVWVGEAGV   83 (305)
Q Consensus        50 ~~IlL~~gvsIT~~al~~la~~--Gi~V~f~g~~G~   83 (305)
                      -.|+|||+.++|-..++.+++.  .+.|+|++.+.-
T Consensus        93 ~pivlGGdHsis~~~~~a~~~~~~~~~vI~~DAH~D  128 (322)
T 2aeb_A           93 ISLVLGGDHSLAIGSISGHARVHPDLGVIWVDAHTD  128 (322)
T ss_dssp             EEEEEESCGGGHHHHHHHHHHHCTTCEEEEESSSCC
T ss_pred             EEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             478955887622777888874067744998613576


No 18 
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A
Probab=27.22  E-value=21  Score=14.57  Aligned_cols=31  Identities=19%  Similarity=0.099  Sum_probs=14.9

Q ss_pred             EEECCCCEECHHHHHHHHH-CCCEEEEECCCC
Q ss_conf             6861773036889999997-598899988987
Q T0603            52 IMLEPGTRVSHAAVRLAAQ-VGTLLVWVGEAG   82 (305)
Q Consensus        52 IlL~~gvsIT~~al~~la~-~Gi~V~f~g~~G   82 (305)
                      |+|||+.+||-..++.+.+ ..+.|+|++.+-
T Consensus       115 i~lGGdHsit~~~~~al~~~~~~~vI~~DAH~  146 (305)
T 1woh_A          115 VFLGGDHSVSYPLLRAFADVPDLHVVQLDAHL  146 (305)
T ss_dssp             EEEESSGGGHHHHHGGGTTSTTEEEEEECSSC
T ss_pred             ECCCCCCCCCHHHHHHHHHCCEEEEEEECCCC
T ss_conf             11366666425799987523615788751444


No 19 
>3cs3_A Sugar-binding transcriptional regulator, LACI family; structural genomics, protein structure initiative, PSI-2; 2.40A {Enterococcus faecalis V583}
Probab=23.36  E-value=29  Score=13.57  Aligned_cols=50  Identities=12%  Similarity=0.126  Sum_probs=33.5

Q ss_pred             EEEEEECCCEEEECCCCCCCEEEECCCCEECHHHHHHHHHCCCEEEEECCC
Q ss_conf             899987686578616100356686177303688999999759889998898
Q T0603            31 AFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEA   81 (305)
Q Consensus        31 ~l~i~~~~g~~~~IPi~~i~~IlL~~gvsIT~~al~~la~~Gi~V~f~g~~   81 (305)
                      .+.+.+.+.....+.-..++.+++.+ ...+...+..+.+.|+++++++..
T Consensus        40 ~~~~~~~~~~~~~l~~~~vdGlIi~~-~~~~~~~~~~l~~~~ipvV~~~~~   89 (277)
T 3cs3_A           40 EMIVCSGKKSHLFIPEKMVDGAIILD-WTFPTKEIEKFAERGHSIVVLDRT   89 (277)
T ss_dssp             EEEEEESTTTTTCCCTTTCSEEEEEC-TTSCHHHHHHHHHTTCEEEESSSC
T ss_pred             EEEEECCHHHHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHCCCCEEEECCC
T ss_conf             89998185889999967999899954-879989999999749989998677


No 20 
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=21.63  E-value=32  Score=13.35  Aligned_cols=39  Identities=18%  Similarity=0.308  Sum_probs=32.1

Q ss_pred             ECCCCCCCEEEECCCCEECHHHHHHHHHCCCEEEEECCCC
Q ss_conf             6161003566861773036889999997598899988987
Q T0603            43 HIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAG   82 (305)
Q Consensus        43 ~IPi~~i~~IlL~~gvsIT~~al~~la~~Gi~V~f~g~~G   82 (305)
                      ..|-+++++|++|+|..=..+|++ ++++|..|+.+....
T Consensus       121 ~~~~e~~DVlVVG~G~AGl~AAi~-Aae~GakVillEK~~  159 (571)
T 1y0p_A          121 SAPHDTVDVVVVGSGGAGFSAAIS-ATDSGAKVILIEKEP  159 (571)
T ss_dssp             SCCSEECSEEEECCSHHHHHHHHH-HHHTTCCEEEECSSS
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHH-HHHCCCCEEEEECCC
T ss_conf             899994049998987999999999-998899489996899


No 21 
>2nml_A Enhancer of rudimentary homolog; HEF2/ERH fold, pseudo beta barrel, interaction network, transcription, cell cycle; 1.55A {Homo sapiens} SCOP: d.330.1.1 PDB: 1w9g_A 1wwq_A 1wz7_A
Probab=20.16  E-value=28  Score=13.72  Aligned_cols=17  Identities=29%  Similarity=0.520  Sum_probs=13.3

Q ss_pred             CCCCCEEECCHHHHHHH
Q ss_conf             89875130005553356
Q T0603           210 GKPLSFVYDIADIIKFD  226 (305)
Q Consensus       210 g~~~Slv~DiADlfK~~  226 (305)
                      ++..+..|||+|||...
T Consensus        45 p~~~~ItYdi~~Lf~fI   61 (104)
T 2nml_A           45 PNSPSITYDISQLFDFI   61 (104)
T ss_dssp             TTCSSCCCCHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHH
T ss_conf             99985020599999998


Done!