Query         T0604 3NLC, Vibrio parahaemolyticus, 549 residues
Match_columns 549
No_of_seqs    329 out of 2758
Neff          7.3 
Searched_HMMs 22458
Date          Mon Jul  5 09:27:51 2010
Command       /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0604.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0604.hhr 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2i0z_A NAD(FAD)-utilizing dehy 100.0   1E-38 4.6E-43  259.5  22.6  404  103-544    22-445 (447)
  2 3cp8_A TRNA uridine 5-carboxym 100.0 1.4E-37 6.1E-42  252.5  16.2  368  108-544    22-413 (641)
  3 3ces_A MNMG, tRNA uridine 5-ca 100.0 6.5E-34 2.9E-38  229.5  19.0  354  107-539    28-418 (651)
  4 2zxi_A TRNA uridine 5-carboxym 100.0 2.3E-32   1E-36  219.8  18.1  360  107-540    27-424 (637)
  5 3g5s_A Methylenetetrahydrofola 100.0 2.8E-31 1.3E-35  212.9   8.3  350  108-539     2-362 (443)
  6 1qo8_A Flavocytochrome C3 fuma 100.0 1.4E-28 6.1E-33  196.1  18.2  174  108-289   122-323 (566)
  7 1d4d_A Flavocytochrome C fumar 100.0 1.2E-28 5.4E-33  196.4  16.8  179  108-291   127-330 (572)
  8 1y0p_A Fumarate reductase flav 100.0 3.2E-28 1.4E-32  193.8  17.1  173  108-288   127-327 (571)
  9 2gqf_A Hypothetical protein HI 100.0 6.4E-26 2.9E-30  179.3  24.7  379  107-541     4-401 (401)
 10 2h88_A Succinate dehydrogenase  99.9 9.1E-24 4.1E-28  165.8  18.1  182  108-292    19-245 (621)
 11 2wdq_A Succinate dehydrogenase  99.9 2.2E-23 9.6E-28  163.4  19.3  182  108-292     8-234 (588)
 12 1kf6_A Fumarate reductase flav  99.9 1.5E-20 6.6E-25  145.7  25.1  181  108-292     6-225 (602)
 13 2bs2_A Quinol-fumarate reducta  99.9 2.9E-20 1.3E-24  143.8  26.0  167  108-277     6-220 (660)
 14 1jnr_A Adenylylsulfate reducta  99.9 1.8E-19 7.9E-24  138.9  24.9  170  103-277    18-218 (643)
 15 2e5v_A L-aspartate oxidase; ar  99.9 2.8E-20 1.2E-24  143.9  18.0  176  110-291     2-203 (472)
 16 1chu_A Protein (L-aspartate ox  99.8 5.1E-21 2.3E-25  148.6  10.9  181  107-292     8-236 (540)
 17 1o94_A Tmadh, trimethylamine d  99.8 9.6E-24 4.3E-28  165.7  -3.6  127   20-146   302-428 (729)
 18 3ka7_A Oxidoreductase; structu  99.8 3.2E-18 1.4E-22  131.1  23.4   55  219-274   195-249 (425)
 19 1ps9_A 2,4-dienoyl-COA reducta  99.8 2.8E-22 1.3E-26  156.5  -2.0  175   20-275   291-465 (671)
 20 3gyx_A Adenylylsulfate reducta  99.8 6.2E-17 2.7E-21  123.0  20.5  168  107-277    22-233 (662)
 21 2cul_A Glucose-inhibited divis  99.8 1.7E-18 7.4E-23  132.8  10.7  162  108-319     4-188 (232)
 22 1s3e_A Amine oxidase [flavin-c  99.8 1.1E-16 4.8E-21  121.4  18.7   42  108-149     5-46  (520)
 23 1b37_A Protein (polyamine oxid  99.7 8.8E-16 3.9E-20  115.7  19.6   43  107-149     4-47  (472)
 24 2gmh_A Electron transfer flavo  99.7 6.8E-15   3E-19  110.1  22.0  166  100-279    28-219 (584)
 25 2gag_B Heterotetrameric sarcos  99.7 1.1E-15 4.7E-20  115.2  16.4  176  108-284    22-237 (405)
 26 2oln_A NIKD protein; flavoprot  99.7   1E-15 4.6E-20  115.3  14.7  172  108-281     5-212 (397)
 27 1pj5_A N,N-dimethylglycine oxi  99.7 9.6E-16 4.3E-20  115.5  14.2  177  107-284     4-214 (830)
 28 3i6d_A Protoporphyrinogen oxid  99.7 4.2E-14 1.9E-18  105.2  20.5   44  106-149     4-53  (470)
 29 3fmw_A Oxygenase; mithramycin,  99.6 9.1E-16   4E-20  115.6  10.7  172  103-293    45-219 (570)
 30 2qa1_A PGAE, polyketide oxygen  99.6 2.3E-15   1E-19  113.1  12.3  163  106-292    10-176 (500)
 31 1y56_B Sarcosine oxidase; dehy  99.6 1.1E-14 4.7E-19  108.9  15.2  175  108-283     6-211 (382)
 32 2gf3_A MSOX, monomeric sarcosi  99.6 5.8E-15 2.6E-19  110.6  13.8  171  109-281     5-209 (389)
 33 2qa2_A CABE, polyketide oxygen  99.6 4.3E-15 1.9E-19  111.4  11.9  153  105-276    10-165 (499)
 34 3i3l_A Alkylhalidase CMLS; fla  99.6 3.8E-15 1.7E-19  111.7  10.5  159  103-277    19-188 (591)
 35 3e1t_A Halogenase; flavoprotei  99.6 1.1E-14   5E-19  108.8  12.5  140  107-276     7-171 (512)
 36 2uzz_A N-methyl-L-tryptophan o  99.6 5.1E-15 2.3E-19  110.9  10.7  171  106-279     1-206 (372)
 37 2vvm_A Monoamine oxidase N; FA  99.6 9.1E-14 4.1E-18  103.1  16.1   55  219-274   254-309 (495)
 38 3f8d_A Thioredoxin reductase (  99.6 2.1E-14 9.1E-19  107.1  12.4  109  108-276    16-124 (323)
 39 1d5t_A Guanine nucleotide diss  99.6   2E-14 8.8E-19  107.2  11.4   55  219-274   233-287 (433)
 40 2yqu_A 2-oxoglutarate dehydrog  99.6 2.3E-14   1E-18  106.8  11.3   79  195-275   184-262 (455)
 41 3fbs_A Oxidoreductase; structu  99.6 7.4E-14 3.3E-18  103.6  13.2  110  106-275     1-110 (297)
 42 3d1c_A Flavin-containing putat  99.6 6.8E-14   3E-18  103.9  13.0  138  108-276     5-142 (369)
 43 2vou_A 2,6-dihydroxypyridine h  99.6 7.2E-14 3.2E-18  103.7  12.7  150  106-277     4-154 (397)
 44 2b9w_A Putative aminooxidase;   99.6 5.1E-14 2.3E-18  104.7  11.7   45  105-149     4-49  (424)
 45 3cgv_A Geranylgeranyl reductas  99.6 2.1E-14 9.5E-19  107.0   9.7  155  108-277     5-162 (397)
 46 3k7m_X 6-hydroxy-L-nicotine ox  99.5 4.1E-14 1.8E-18  105.3  11.1   50  225-275   208-257 (431)
 47 2iid_A L-amino-acid oxidase; f  99.5 1.2E-13 5.4E-18  102.3  12.8   47  103-149    29-75  (498)
 48 2zbw_A Thioredoxin reductase;   99.5 1.4E-13 6.3E-18  101.9  12.7  114  108-275     6-119 (335)
 49 3ihg_A RDME; flavoenzyme, anth  99.5 2.7E-14 1.2E-18  106.4   8.4  170  108-294     6-196 (535)
 50 3gmb_A 2-methyl-3-hydroxypyrid  99.5 2.3E-13   1E-17  100.6  13.2  136  107-276    47-195 (415)
 51 1gte_A Dihydropyrimidine dehyd  99.5 7.3E-13 3.2E-17   97.4  14.8   43  103-145   183-226 (1025)
 52 1k0i_A P-hydroxybenzoate hydro  99.5 1.2E-13 5.4E-18  102.3  10.4  151  106-275     1-161 (394)
 53 2vdc_G Glutamate synthase [NAD  99.5 9.7E-13 4.3E-17   96.7  14.9   99  103-275   118-217 (456)
 54 3da1_A Glycerol-3-phosphate de  99.5 7.5E-13 3.4E-17   97.3  13.5  174  108-283    19-238 (561)
 55 2gv8_A Monooxygenase; FMO, FAD  99.5 2.4E-13 1.1E-17  100.5  10.5  157  107-276     6-176 (447)
 56 2bry_A NEDD9 interacting prote  99.5 9.9E-14 4.4E-18  102.8   8.0  132  104-275    89-228 (497)
 57 2ivd_A PPO, PPOX, protoporphyr  99.5 6.1E-13 2.7E-17   97.9  11.8   45  105-149    14-58  (478)
 58 2r0c_A REBC; flavin adenine di  99.5 1.7E-14 7.7E-19  107.6   3.8  176  104-294    23-209 (549)
 59 2rgh_A Alpha-glycerophosphate   99.5 4.9E-12 2.2E-16   92.2  16.1  175  108-283    33-256 (571)
 60 2vq7_A Flavin-containing monoo  99.4 2.5E-13 1.1E-17  100.3   8.4  153  104-276     4-170 (461)
 61 1w4x_A Phenylacetone monooxyge  99.4 1.2E-12 5.4E-17   96.0  11.7  129  107-275    16-152 (542)
 62 1trb_A Thioredoxin reductase;   99.4 1.6E-12 7.2E-17   95.2  12.0  110  107-275     5-114 (320)
 63 2e1m_A L-glutamate oxidase; L-  99.4 1.1E-12 4.9E-17   96.3  11.0   48  103-150    40-88  (376)
 64 1rp0_A ARA6, thiazole biosynth  99.4 3.2E-12 1.4E-16   93.4  13.3  142  105-279    37-193 (284)
 65 1ryi_A Glycine oxidase; flavop  99.4 1.9E-12 8.6E-17   94.8  12.1  168  108-283    18-225 (382)
 66 2bcg_G Secretory pathway GDP d  99.4 2.5E-12 1.1E-16   94.1  12.4   53  220-273   242-296 (453)
 67 3fg2_P Putative rubredoxin red  99.4 5.8E-12 2.6E-16   91.7  14.2   60  219-278   183-242 (404)
 68 2cdu_A NADPH oxidase; flavoenz  99.4 6.5E-12 2.9E-16   91.5  14.2   56  219-275   190-245 (452)
 69 3c96_A Flavin-containing monoo  99.4 4.9E-12 2.2E-16   92.3  12.6  153  107-276     4-168 (410)
 70 2eq6_A Pyruvate dehydrogenase   99.4   1E-11 4.5E-16   90.3  12.9   35  109-144     8-42  (464)
 71 1zmd_A Dihydrolipoyl dehydroge  99.4 1.5E-11 6.9E-16   89.1  13.5   41  104-144     3-43  (474)
 72 3cty_A Thioredoxin reductase;   99.4 5.5E-11 2.5E-15   85.6  16.1   49  497-546   270-319 (319)
 73 2qcu_A Aerobic glycerol-3-phos  99.4 4.2E-11 1.9E-15   86.3  15.4  175  108-284     4-217 (501)
 74 3dje_A Fructosyl amine: oxygen  99.4 1.5E-11 6.9E-16   89.1  13.2  169  106-277     5-221 (438)
 75 3lov_A Protoporphyrinogen oxid  99.4 1.8E-11 7.8E-16   88.7  13.3   44  106-149     3-48  (475)
 76 1ges_A Glutathione reductase;   99.4 3.1E-12 1.4E-16   93.4   9.2   35  109-144     6-40  (450)
 77 3c4a_A Probable tryptophan hyd  99.3 3.3E-12 1.5E-16   93.3   8.7  138  109-275     2-141 (381)
 78 1fl2_A Alkyl hydroperoxide red  99.3 1.5E-11 6.6E-16   89.2  11.8  109  109-275     3-113 (310)
 79 1ebd_A E3BD, dihydrolipoamide   99.3 3.4E-11 1.5E-15   86.9  13.6   34  107-140     3-36  (455)
 80 3gwf_A Cyclohexanone monooxyge  99.3 2.2E-11 9.7E-16   88.2  12.5  134  107-275     8-145 (540)
 81 1hyu_A AHPF, alkyl hydroperoxi  99.3 2.4E-11 1.1E-15   87.9  12.1  112  106-275   211-324 (521)
 82 2weu_A Tryptophan 5-halogenase  99.3 6.9E-11 3.1E-15   85.0  14.2   59  217-275   170-228 (511)
 83 2qae_A Lipoamide, dihydrolipoy  99.3 7.7E-11 3.4E-15   84.7  14.5   36  109-144     4-39  (468)
 84 2r9z_A Glutathione amide reduc  99.3 3.3E-11 1.4E-15   87.1  12.4   32  109-140     6-37  (463)
 85 3ef6_A Toluene 1,2-dioxygenase  99.3 3.8E-12 1.7E-16   92.9   7.6  107  106-275     1-109 (410)
 86 1zk7_A HGII, reductase, mercur  99.3 2.2E-11 9.7E-16   88.2  11.2   33  108-140     5-37  (467)
 87 3iwa_A FAD-dependent pyridine   99.3 2.7E-11 1.2E-15   87.6  11.4   36  107-142     3-40  (472)
 88 2pyx_A Tryptophan halogenase;   99.3 1.5E-10 6.9E-15   82.8  14.8   59  217-275   172-231 (526)
 89 3ics_A Coenzyme A-disulfide re  99.3 8.7E-11 3.9E-15   84.4  13.5   91  196-292   205-295 (588)
 90 3klj_A NAD(FAD)-dependent dehy  99.3 3.6E-12 1.6E-16   93.0   6.4  109  104-275     6-114 (385)
 91 2dkh_A 3-hydroxybenzoate hydro  99.3 1.3E-12 5.6E-17   95.9   3.6  174  106-293    31-223 (639)
 92 2z3y_A Lysine-specific histone  99.3 8.2E-12 3.6E-16   90.8   6.8   52   98-149    98-149 (662)
 93 1dxl_A Dihydrolipoamide dehydr  99.3 1.8E-10 7.9E-15   82.4  13.4   38  107-144     6-43  (470)
 94 1ojt_A Surface protein; redox-  99.3 4.1E-11 1.8E-15   86.5  10.1   37  108-144     7-43  (482)
 95 1aog_A Trypanothione reductase  99.2 1.2E-10 5.2E-15   83.6  12.3   56  220-275   231-286 (485)
 96 2bc0_A NADH oxidase; flavoprot  99.2 4.5E-11   2E-15   86.2   9.8  112  104-274    32-146 (490)
 97 1v59_A Dihydrolipoamide dehydr  99.2 2.6E-10 1.2E-14   81.4  13.5   37  108-144     6-42  (478)
 98 2xag_A Lysine-specific histone  99.2 1.6E-11 7.2E-16   89.0   6.9   51   99-149   270-320 (852)
 99 2a8x_A Dihydrolipoyl dehydroge  99.2 2.1E-10 9.5E-15   82.0  12.0  134  109-275     5-144 (464)
100 1xdi_A RV3303C-LPDA; reductase  99.2 2.6E-10 1.2E-14   81.4  12.3   37  106-143     1-40  (499)
101 2v3a_A Rubredoxin reductase; a  99.2 3.8E-10 1.7E-14   80.4  13.1  105  108-275     5-111 (384)
102 1lvl_A Dihydrolipoamide dehydr  99.2   5E-11 2.2E-15   85.9   8.0   36  105-140     3-38  (458)
103 3dk9_A Grase, GR, glutathione   99.2 3.7E-10 1.6E-14   80.5  12.4   36  108-144    21-56  (478)
104 2ywl_A Thioredoxin reductase r  99.2 6.6E-10 2.9E-14   78.9  13.2  107  109-276     3-109 (180)
105 1c0p_A D-amino acid oxidase; a  99.2 5.1E-10 2.3E-14   79.6  12.6  154  106-278     5-186 (363)
106 2q7v_A Thioredoxin reductase;   99.2   5E-10 2.2E-14   79.6  12.5  116  103-275     4-121 (325)
107 3itj_A Thioredoxin reductase 1  99.2 1.1E-10 5.1E-15   83.7   9.1  120  104-275    19-140 (338)
108 3lad_A Dihydrolipoamide dehydr  99.2 1.2E-09 5.5E-14   77.2  14.3   38  107-144     3-40  (476)
109 3dgz_A Thioredoxin reductase 2  99.2 9.3E-10 4.2E-14   77.9  13.5  142  108-276     7-158 (488)
110 1mo9_A ORF3; nucleotide bindin  99.2 2.1E-10 9.5E-15   82.0   9.9   43  102-144    38-80  (523)
111 1coy_A Cholesterol oxidase; ox  99.2 3.9E-10 1.7E-14   80.3  11.2   35  107-141    11-45  (507)
112 1kdg_A CDH, cellobiose dehydro  99.2 6.7E-09   3E-13   72.5  17.4   51  224-274   199-258 (546)
113 1q1r_A Putidaredoxin reductase  99.1 2.4E-09 1.1E-13   75.3  15.1  109  106-276     3-113 (431)
114 3dme_A Conserved exported prot  99.1 5.7E-10 2.5E-14   79.3  11.8  174  108-281     5-213 (369)
115 2a87_A TRXR, TR, thioredoxin r  99.1 6.8E-10   3E-14   78.8  12.0  111  107-275    14-124 (335)
116 2e4g_A Tryptophan halogenase;   99.1 4.2E-10 1.9E-14   80.1  10.9   58  218-275   192-250 (550)
117 1sez_A Protoporphyrinogen oxid  99.1   4E-11 1.8E-15   86.5   5.4   44  105-148    11-54  (504)
118 3kd9_A Coenzyme A disulfide re  99.1 1.3E-10 5.7E-15   83.3   8.0  107  108-276     4-113 (449)
119 1rsg_A FMS1 protein; FAD bindi  99.1 3.4E-11 1.5E-15   87.0   4.9   46  104-149     5-51  (516)
120 2jae_A L-amino acid oxidase; o  99.1 6.3E-11 2.8E-15   85.3   6.3   47  103-149     7-53  (489)
121 2aqj_A Tryptophan halogenase,   99.1 5.9E-10 2.6E-14   79.2  11.2   57  218-275   163-220 (538)
122 1yvv_A Amine oxidase, flavin-c  99.1 5.6E-11 2.5E-15   85.6   6.0   43  106-148     1-43  (336)
123 1nhp_A NADH peroxidase; oxidor  99.1 4.3E-10 1.9E-14   80.0  10.4  108  109-275     2-113 (447)
124 3ihm_A Styrene monooxygenase A  99.1 1.6E-10 7.2E-15   82.7   8.1   39  102-140    17-55  (430)
125 2q0l_A TRXR, thioredoxin reduc  99.1 1.3E-09 5.9E-14   77.0  12.4  111  108-275     2-112 (311)
126 2gag_A Heterotetrameric sarcos  99.1 1.2E-09 5.3E-14   77.3  12.0   40  109-148   130-169 (965)
127 1onf_A GR, grase, glutathione   99.1 2.1E-09 9.3E-14   75.7  13.2   38  106-144     1-38  (500)
128 2bi7_A UDP-galactopyranose mut  99.1 7.9E-11 3.5E-15   84.7   5.9   44  106-149     2-45  (384)
129 3h28_A Sulfide-quinone reducta  99.1 8.2E-11 3.6E-15   84.6   6.0  105  106-275     1-107 (430)
130 1m6i_A Programmed cell death p  99.1 1.7E-09 7.7E-14   76.2  12.5  132  106-276    10-143 (493)
131 3h8l_A NADH oxidase; membrane   99.1 1.1E-09 4.7E-14   77.6  11.4  105  108-275     2-111 (409)
132 3cgb_A Pyridine nucleotide-dis  99.1 7.3E-10 3.2E-14   78.6  10.0   36  107-142    36-73  (480)
133 3kpk_A Sulfide-quinone reducta  99.1 3.5E-10 1.6E-14   80.6   8.1  104  108-276     2-108 (434)
134 2v6o_A Thioredoxin glutathione  99.1 4.7E-09 2.1E-13   73.5  13.0  145  108-275   108-259 (596)
135 2hqm_A GR, grase, glutathione   99.0 2.7E-09 1.2E-13   75.0  11.6   35  108-143    12-46  (479)
136 2gqw_A Ferredoxin reductase; f  99.0 6.5E-09 2.9E-13   72.6  13.5  108  103-276     3-112 (408)
137 1y56_A Hypothetical protein PH  99.0 7.6E-10 3.4E-14   78.5   7.8  106  107-274   108-216 (493)
138 1yqz_A Coenzyme A disulfide re  99.0 2.2E-09 9.6E-14   75.6   9.6   35  108-142     2-38  (438)
139 1n4w_A CHOD, cholesterol oxida  99.0   5E-09 2.2E-13   73.3  11.3   33  109-141     7-39  (504)
140 3dgh_A TRXR-1, thioredoxin red  99.0 2.1E-09 9.2E-14   75.8   9.2  143  107-275     9-160 (483)
141 2f5v_A Pyranose 2-oxidase; fla  99.0 1.6E-08 7.1E-13   70.2  13.5   37  105-141    16-52  (595)
142 3l8k_A Dihydrolipoyl dehydroge  99.0 2.5E-09 1.1E-13   75.3   9.1   37  108-144     5-41  (466)
143 1xhc_A NADH oxidase /nitrite r  99.0 5.4E-10 2.4E-14   79.4   5.3  107  105-276     6-112 (367)
144 3hdq_A UDP-galactopyranose mut  99.0 7.2E-10 3.2E-14   78.6   5.9   44  105-148    27-70  (397)
145 2gjc_A Thiazole biosynthetic e  99.0 2.4E-09 1.1E-13   75.3   8.4  114  106-252    64-179 (326)
146 2zzc_A Thioredoxin reductase 1  98.9 1.4E-09 6.2E-14   76.8   6.7   41  103-143    22-62  (513)
147 1v0j_A UDP-galactopyranose mut  98.9 1.1E-09 4.8E-14   77.5   6.1   43  107-149     7-50  (399)
148 1fec_A Trypanothione reductase  98.9 2.7E-08 1.2E-12   68.8  12.7   36  107-142     3-39  (490)
149 1i8t_A UDP-galactopyranose mut  98.9 1.3E-09 5.8E-14   77.0   5.0   42  108-149     2-43  (367)
150 3ic9_A Dihydrolipoamide dehydr  98.9 1.2E-08 5.2E-13   71.0   9.6   33  108-140     9-41  (492)
151 1fcd_A Flavocytochrome C sulfi  98.9 1.7E-08 7.5E-13   70.1  10.2  103  107-275     2-106 (401)
152 1cjc_A Protein (adrenodoxin re  98.8 2.8E-09 1.2E-13   74.9   5.0   42  103-144     2-45  (460)
153 2yr5_A Pro-enzyme of L-phenyla  98.7 4.2E-09 1.9E-13   73.8   3.5   44  106-149    55-123 (721)
154 1lqt_A FPRA; NADP+ derivative,  98.7 8.6E-09 3.8E-13   71.9   3.6   37  108-144     4-47  (456)
155 1vdc_A NTR, NADPH dependent th  98.6 1.7E-08 7.6E-13   70.0   4.1  116  106-275     7-122 (333)
156 3d1c_A Flavin-containing putat  98.6 6.5E-07 2.9E-11   60.1  11.5  109  103-277   162-272 (369)
157 1fec_A Trypanothione reductase  98.6 1.5E-07 6.5E-12   64.2   8.1  100  104-275   184-286 (490)
158 2hqm_A GR, grase, glutathione   98.6 1.4E-06 6.3E-11   58.0  12.1   98  105-274   183-282 (479)
159 2bc0_A NADH oxidase; flavoprot  98.5   2E-06   9E-11   57.0  12.7   99  105-276   192-290 (490)
160 1mo9_A ORF3; nucleotide bindin  98.5 1.8E-06 8.1E-11   57.3  11.2  102  105-278   212-317 (523)
161 2v6o_A Thioredoxin glutathione  98.5 3.7E-06 1.7E-10   55.4  12.3   97  106-275   285-393 (596)
162 1pn0_A Phenol 2-monooxygenase;  98.5 1.5E-07 6.7E-12   64.1   5.1   52  109-167    10-66  (665)
163 1nhp_A NADH peroxidase; oxidor  98.5 3.6E-06 1.6E-10   55.4  12.2   99  105-276   147-245 (447)
164 3dgh_A TRXR-1, thioredoxin red  98.4 3.9E-06 1.7E-10   55.2  12.0   99  104-275   184-287 (483)
165 2jbv_A Choline oxidase; alcoho  98.4 2.3E-07   1E-11   62.9   4.8   34  108-141    14-48  (546)
166 3g3e_A D-amino-acid oxidase; F  98.4 8.8E-08 3.9E-12   65.5   1.9   52  214-278   136-187 (351)
167 2zbw_A Thioredoxin reductase;   98.3 2.6E-06 1.2E-10   56.3   8.9   97  105-275   150-250 (335)
168 3kd9_A Coenzyme A disulfide re  98.3 1.1E-05 4.9E-10   52.4  11.8  112  105-292   146-257 (449)
169 3cgb_A Pyridine nucleotide-dis  98.3 1.1E-05 4.8E-10   52.4  11.1   99  105-277   184-282 (480)
170 1cf3_A Protein (glucose oxidas  98.3 5.6E-07 2.5E-11   60.5   4.5   37  107-143    19-56  (583)
171 1gpe_A Protein (glucose oxidas  98.3 8.9E-07   4E-11   59.2   5.1   36  107-142    24-60  (587)
172 3fim_B ARYL-alcohol oxidase; A  98.2 5.3E-07 2.4E-11   60.6   2.9   33  109-141     4-37  (566)
173 2zzc_A Thioredoxin reductase 1  98.2   6E-05 2.7E-09   47.8  13.4   99  104-275   201-307 (513)
174 1ju2_A HydroxynitrIle lyase; f  98.1 1.6E-06 7.1E-11   57.7   3.3   35  107-142    26-60  (536)
175 3gwf_A Cyclohexanone monooxyge  97.9 0.00026 1.2E-08   43.7  12.6   37  105-141   176-212 (540)
176 3ic9_A Dihydrolipoamide dehydr  97.9 0.00018   8E-09   44.8  11.1   39  104-142   171-209 (492)
177 1w4x_A Phenylacetone monooxyge  97.9  0.0004 1.8E-08   42.6  12.6   36  106-141   185-220 (542)
178 1hyu_A AHPF, alkyl hydroperoxi  97.8 4.6E-05   2E-09   48.5   7.3   50  496-546   469-519 (521)
179 2eq6_A Pyruvate dehydrogenase   97.8 2.3E-05   1E-09   50.4   5.6   99  105-276   167-270 (464)
180 2a8x_A Dihydrolipoyl dehydroge  97.8 3.1E-05 1.4E-09   49.6   5.8  101  104-276   168-270 (464)
181 1lvl_A Dihydrolipoamide dehydr  97.8 3.2E-05 1.4E-09   49.5   5.6   99  104-275   168-266 (458)
182 1xhc_A NADH oxidase /nitrite r  97.8   9E-05   4E-09   46.7   7.9   91  107-276   143-233 (367)
183 3lad_A Dihydrolipoamide dehydr  97.8 3.8E-05 1.7E-09   49.0   6.0  100  104-275   177-278 (476)
184 1dxl_A Dihydrolipoamide dehydr  97.7   3E-05 1.3E-09   49.6   4.9  100  104-275   174-277 (470)
185 3fbs_A Oxidoreductase; structu  97.7 0.00012 5.3E-09   45.9   7.5   45  500-545   250-294 (297)
186 3klj_A NAD(FAD)-dependent dehy  97.7 0.00011 4.7E-09   46.2   7.1   84  107-275   146-229 (385)
187 1v59_A Dihydrolipoamide dehydr  97.7 6.2E-05 2.8E-09   47.7   5.9   99  105-275   181-285 (478)
188 2q7v_A Thioredoxin reductase;   97.7 0.00031 1.4E-08   43.3   9.4   35  105-139   150-184 (325)
189 1trb_A Thioredoxin reductase;   97.7 0.00067   3E-08   41.2  11.1   34  106-139   144-177 (320)
190 2vq7_A Flavin-containing monoo  97.7 0.00037 1.6E-08   42.8   9.7   33  106-138   201-233 (461)
191 1zmd_A Dihydrolipoyl dehydroge  97.6 8.7E-05 3.9E-09   46.8   6.0  101  104-275   175-280 (474)
192 2r9z_A Glutathione amide reduc  97.5 0.00012 5.4E-09   45.8   5.8   99  105-275   164-262 (463)
193 1ojt_A Surface protein; redox-  97.5 0.00012 5.3E-09   45.9   5.5   99  105-276   183-285 (482)
194 1onf_A GR, grase, glutathione   97.4 0.00022 9.8E-09   44.2   5.6   99  105-275   174-273 (500)
195 3l8k_A Dihydrolipoyl dehydroge  97.4 0.00024 1.1E-08   44.0   5.8   38  104-141   169-206 (466)
196 3dgz_A Thioredoxin reductase 2  97.4 0.00033 1.5E-08   43.1   6.2  100  104-276   182-286 (488)
197 3f8d_A Thioredoxin reductase (  97.3  0.0025 1.1E-07   37.7  10.0   47  500-547   272-321 (323)
198 2qae_A Lipoamide, dihydrolipoy  97.3 0.00041 1.8E-08   42.5   5.8  100  105-276   172-275 (468)
199 1ebd_A E3BD, dihydrolipoamide   97.3 0.00045   2E-08   42.3   6.0   99  105-275   168-268 (455)
200 1xdi_A RV3303C-LPDA; reductase  97.3 0.00048 2.1E-08   42.1   6.0   99  104-275   179-277 (499)
201 1fl2_A Alkyl hydroperoxide red  97.2  0.0018   8E-08   38.5   8.3   46  500-546   262-308 (310)
202 3dk9_A Grase, GR, glutathione   97.2 0.00062 2.8E-08   41.4   5.9   99  105-275   185-291 (478)
203 1zk7_A HGII, reductase, mercur  97.2 0.00059 2.6E-08   41.5   5.7   99  104-277   173-271 (467)
204 2a87_A TRXR, TR, thioredoxin r  97.1 0.00053 2.3E-08   41.9   4.7   36  106-141   154-189 (335)
205 1ges_A Glutathione reductase;   97.0  0.0011 4.7E-08   40.0   5.8   99  105-275   165-263 (450)
206 3ef6_A Toluene 1,2-dioxygenase  97.0 0.00092 4.1E-08   40.3   5.4  112  106-291   142-253 (410)
207 2q0l_A TRXR, thioredoxin reduc  97.0 0.00089   4E-08   40.4   5.3   44  500-544   266-310 (311)
208 3c4n_A Uncharacterized protein  97.0  0.0077 3.4E-07   34.5   9.8  182  106-291    35-248 (405)
209 3i83_A 2-dehydropantoate 2-red  96.9   0.001 4.5E-08   40.1   5.0   35  106-140     1-35  (320)
210 1bg6_A N-(1-D-carboxylethyl)-L  96.9 0.00099 4.4E-08   40.1   4.6   36  107-142     4-39  (359)
211 3ics_A Coenzyme A-disulfide re  96.8  0.0019 8.4E-08   38.4   5.5  113  105-275    34-150 (588)
212 2uyy_A N-PAC protein; long-cha  96.8  0.0022 9.6E-08   38.0   5.7   59   84-142     7-65  (316)
213 2gqw_A Ferredoxin reductase; f  96.7  0.0025 1.1E-07   37.6   5.8   98  105-278   143-240 (408)
214 2vdc_G Glutamate synthase [NAD  96.7  0.0034 1.5E-07   36.8   6.4   49  497-546   398-447 (456)
215 2cdu_A NADPH oxidase; flavoenz  96.7  0.0025 1.1E-07   37.6   5.5  110  109-275     2-115 (452)
216 3hn2_A 2-dehydropantoate 2-red  96.7  0.0015 6.9E-08   38.9   4.3   35  106-140     1-35  (312)
217 1evy_A Glycerol-3-phosphate de  96.6 0.00088 3.9E-08   40.4   3.0   33  108-140    16-48  (366)
218 3ghy_A Ketopantoate reductase   96.6  0.0022 9.6E-08   38.0   4.9   33  108-140     4-36  (335)
219 2ew2_A 2-dehydropantoate 2-red  96.6  0.0021 9.2E-08   38.1   4.8   34  107-140     3-36  (316)
220 2jae_A L-amino acid oxidase; o  96.6  0.0014 6.1E-08   39.2   3.9   40  506-545   448-488 (489)
221 2yqu_A 2-oxoglutarate dehydrog  96.6  0.0037 1.7E-07   36.5   5.8   36  109-144     3-38  (455)
222 1yqz_A Coenzyme A disulfide re  96.5   0.003 1.4E-07   37.1   5.2   93  107-276   148-240 (438)
223 2g1u_A Hypothetical protein TM  96.5  0.0066 2.9E-07   35.0   6.9   42  103-144    15-56  (155)
224 3c7a_A Octopine dehydrogenase;  96.5  0.0017 7.3E-08   38.7   3.8   38  106-143     1-39  (404)
225 1q1r_A Putidaredoxin reductase  96.5  0.0046 2.1E-07   35.9   5.8  103  105-278   147-251 (431)
226 3fg2_P Putative rubredoxin red  96.4  0.0043 1.9E-07   36.1   5.4  106  107-275     1-108 (404)
227 3gg2_A Sugar dehydrogenase, UD  96.3  0.0042 1.9E-07   36.2   4.8   36  106-141     1-36  (450)
228 3hwr_A 2-dehydropantoate 2-red  96.3  0.0034 1.5E-07   36.8   4.2   35  107-141    19-53  (318)
229 2hmt_A YUAA protein; RCK, KTN,  96.3  0.0037 1.7E-07   36.5   4.5   36  107-142     6-41  (144)
230 1ks9_A KPA reductase;, 2-dehyd  96.3  0.0053 2.4E-07   35.6   5.2   36  109-144     2-37  (291)
231 3g17_A Similar to 2-dehydropan  96.2  0.0038 1.7E-07   36.5   4.2   36  106-141     1-36  (294)
232 3ius_A Uncharacterized conserv  96.2  0.0046 2.1E-07   35.9   4.6   37  104-140     2-38  (286)
233 1z82_A Glycerol-3-phosphate de  96.2  0.0037 1.7E-07   36.5   4.0   40  103-142    10-49  (335)
234 1lqt_A FPRA; NADP+ derivative,  96.2    0.05 2.2E-06   29.4  10.4   24  106-129   146-169 (456)
235 3fwz_A Inner membrane protein   96.2   0.008 3.6E-07   34.4   5.6   40  103-142     3-42  (140)
236 1f0y_A HCDH, L-3-hydroxyacyl-C  96.1   0.005 2.2E-07   35.7   4.5   37  106-142    14-50  (302)
237 2raf_A Putative dinucleotide-b  96.1  0.0071 3.2E-07   34.8   5.1   35  107-141    19-53  (209)
238 3dtt_A NADP oxidoreductase; YP  96.1   0.006 2.7E-07   35.2   4.7   34  108-141    20-53  (245)
239 2v3a_A Rubredoxin reductase; a  96.1    0.01 4.7E-07   33.7   6.0   99  107-277   145-243 (384)
240 2z3y_A Lysine-specific histone  96.1  0.0036 1.6E-07   36.6   3.5   41  505-545   619-661 (662)
241 3k96_A Glycerol-3-phosphate de  96.0  0.0072 3.2E-07   34.7   4.8   39  104-142    26-64  (356)
242 1lss_A TRK system potassium up  96.0  0.0066 2.9E-07   35.0   4.5   38  107-144     4-41  (140)
243 3itj_A Thioredoxin reductase 1  95.9  0.0055 2.4E-07   35.5   3.7   45  499-544   291-336 (338)
244 3cty_A Thioredoxin reductase;   95.8   0.047 2.1E-06   29.6   8.4   33  109-141    18-50  (319)
245 2dwc_A PH0318, 433AA long hypo  95.8   0.018 8.2E-07   32.2   6.2   42  101-142    13-54  (433)
246 3llv_A Exopolyphosphatase-rela  95.7   0.012 5.4E-07   33.3   4.9   40  104-143     3-42  (141)
247 2dpo_A L-gulonate 3-dehydrogen  95.7    0.01 4.4E-07   33.8   4.4   36  106-141     5-40  (319)
248 3eyw_A C-terminal domain of gl  95.6   0.014 6.1E-07   33.0   4.8   36  107-142     4-39  (413)
249 1gte_A Dihydropyrimidine dehyd  95.6   0.014 6.3E-07   32.9   4.8   99  105-279   330-444 (1025)
250 1zcj_A Peroxisomal bifunctiona  95.6   0.042 1.9E-06   29.9   7.2   37  106-142    36-72  (463)
251 1sez_A Protoporphyrinogen oxid  95.6  0.0068   3E-07   34.9   3.1   39  506-545   458-496 (504)
252 2vvm_A Monoamine oxidase N; FA  95.5    0.01 4.5E-07   33.8   3.9   43  107-149    39-81  (495)
253 2rir_A Dipicolinate synthase,   95.5   0.019 8.3E-07   32.1   5.3   31  107-137     7-37  (300)
254 3ic5_A Putative saccharopine d  95.5   0.015 6.6E-07   32.7   4.7   38  104-141     2-40  (118)
255 1o94_A Tmadh, trimethylamine d  95.5    0.02 8.9E-07   31.9   5.3   39  500-540   659-697 (729)
256 3iwa_A FAD-dependent pyridine   95.4   0.024 1.1E-06   31.5   5.6  113  106-292   158-271 (472)
257 1mv8_A GMD, GDP-mannose 6-dehy  95.4  0.0098 4.4E-07   33.9   3.6   33  109-141     2-34  (436)
258 2wtb_A MFP2, fatty acid multif  95.4   0.031 1.4E-06   30.8   6.1   38  105-142   310-347 (725)
259 1yvv_A Amine oxidase, flavin-c  95.4  0.0076 3.4E-07   34.6   3.0   45  500-546   287-331 (336)
260 2jfg_A UDP-N-acetylmuramoylala  95.4   0.023   1E-06   31.6   5.3   36  107-142     6-41  (445)
261 3d4o_A Dipicolinate synthase s  95.3   0.024 1.1E-06   31.4   5.2   31  107-137     5-35  (293)
262 1vdc_A NTR, NADPH dependent th  95.3   0.018 7.9E-07   32.3   4.5   42  501-543   281-323 (333)
263 1aog_A Trypanothione reductase  95.2   0.034 1.5E-06   30.5   5.6   36  107-142     3-39  (485)
264 3h5n_A MCCB protein; ubiquitin  95.1   0.025 1.1E-06   31.4   4.9   33  106-138   117-150 (353)
265 2xag_A Lysine-specific histone  95.1   0.018 8.2E-07   32.2   4.2   41  506-546   791-833 (852)
266 3lk7_A UDP-N-acetylmuramoylala  95.1   0.023   1E-06   31.5   4.7   36  106-141     8-43  (451)
267 1id1_A Putative potassium chan  95.1   0.036 1.6E-06   30.4   5.6   36  106-141     2-37  (153)
268 3k5i_A Phosphoribosyl-aminoimi  95.1   0.056 2.5E-06   29.1   6.6   63  105-167    22-84  (403)
269 2x58_A Peroxisomal bifunctiona  95.1   0.038 1.7E-06   30.2   5.6   38  105-142   299-336 (727)
270 1lu9_A Methylene tetrahydromet  95.0   0.034 1.5E-06   30.5   5.2   34  106-139   118-152 (287)
271 2ivd_A PPO, PPOX, protoporphyr  94.9  0.0085 3.8E-07   34.3   1.9   52  220-274   238-291 (478)
272 1kjq_A GART 2, phosphoribosylg  94.8   0.077 3.4E-06   28.3   6.7   36  107-142    11-46  (391)
273 3ktd_A Prephenate dehydrogenas  94.8   0.037 1.6E-06   30.3   5.0   40  103-142     4-43  (341)
274 3l4b_C TRKA K+ channel protien  94.7   0.026 1.2E-06   31.2   4.0   34  109-142     2-35  (218)
275 3g79_A NDP-N-acetyl-D-galactos  94.7   0.037 1.6E-06   30.3   4.8   36  107-142    18-55  (478)
276 1ff9_A Saccharopine reductase;  94.6   0.033 1.5E-06   30.6   4.4   36  107-142     3-38  (450)
277 2pv7_A T-protein [includes: ch  94.6   0.061 2.7E-06   28.9   5.7   38  104-141    18-56  (298)
278 3gvi_A Malate dehydrogenase; N  94.6   0.051 2.3E-06   29.4   5.3   39  103-141     2-42  (324)
279 1wdk_A Fatty oxidation complex  94.5   0.041 1.8E-06   30.0   4.7   39  105-143   312-350 (715)
280 1kyq_A Met8P, siroheme biosynt  94.5   0.024 1.1E-06   31.4   3.6   32  106-137    12-43  (274)
281 3h8v_A Ubiquitin-like modifier  94.5    0.04 1.8E-06   30.1   4.6   33  107-139    36-69  (292)
282 3dii_A Short-chain dehydrogena  94.5   0.052 2.3E-06   29.3   5.2   36  106-141     1-37  (247)
283 1m6i_A Programmed cell death p  94.5   0.023   1E-06   31.5   3.4  113  106-292   179-295 (493)
284 2fzw_A Alcohol dehydrogenase c  94.5   0.054 2.4E-06   29.2   5.2   35  105-139   189-224 (373)
285 1cjc_A Protein (adrenodoxin re  94.5   0.021 9.2E-07   31.9   3.1   45  500-545   352-397 (460)
286 3d4o_A Dipicolinate synthase s  94.5   0.039 1.8E-06   30.1   4.5   26  266-291   156-181 (293)
287 1vg0_A RAB proteins geranylger  94.5   0.073 3.2E-06   28.4   5.9   54  221-274   379-434 (650)
288 3ego_A Probable 2-dehydropanto  94.5   0.041 1.8E-06   30.0   4.6   34  106-140     1-34  (307)
289 2iid_A L-amino-acid oxidase; f  94.5   0.023   1E-06   31.5   3.3   52  220-274   241-295 (498)
290 3l6d_A Putative oxidoreductase  94.4   0.064 2.8E-06   28.8   5.5   40  102-141     4-43  (306)
291 1piw_A Hypothetical zinc-type   94.4    0.06 2.7E-06   29.0   5.4   14  463-476   333-347 (360)
292 2jhf_A Alcohol dehydrogenase E  94.4   0.062 2.8E-06   28.8   5.4   33  106-138   191-224 (374)
293 2hjr_A Malate dehydrogenase; m  94.4   0.064 2.8E-06   28.8   5.4   39  104-142    11-50  (328)
294 1ur5_A Malate dehydrogenase; o  94.4   0.062 2.8E-06   28.9   5.3   36  106-141     1-37  (309)
295 1rsg_A FMS1 protein; FAD bindi  94.3   0.041 1.8E-06   30.0   4.3   53  220-274   202-254 (516)
296 2vns_A Metalloreductase steap3  94.3   0.051 2.3E-06   29.4   4.8   36  107-142    28-63  (215)
297 3c85_A Putative glutathione-re  94.2   0.064 2.9E-06   28.8   5.1   39  107-145    39-78  (183)
298 1p3d_A UDP-N-acetylmuramate--a  94.2   0.043 1.9E-06   29.8   4.2   36  107-142    18-54  (475)
299 1zej_A HBD-9, 3-hydroxyacyl-CO  94.1   0.043 1.9E-06   29.8   4.2   36  106-142    11-46  (293)
300 3dfz_A SIRC, precorrin-2 dehyd  94.1   0.051 2.3E-06   29.4   4.5   30  107-136    31-60  (223)
301 2f00_A UDP-N-acetylmuramate--L  94.1   0.037 1.6E-06   30.3   3.7   36  107-142    19-55  (491)
302 1jay_A Coenzyme F420H2:NADP+ o  94.1    0.05 2.2E-06   29.5   4.4   33  109-141     2-35  (212)
303 2r6j_A Eugenol synthase 1; phe  93.9   0.076 3.4E-06   28.3   5.0   39  103-141     7-46  (318)
304 2gv8_A Monooxygenase; FMO, FAD  93.8   0.054 2.4E-06   29.2   4.2   33  106-138   211-243 (447)
305 2v65_A LDH-A, L-lactate dehydr  93.8    0.11 4.7E-06   27.4   5.6   39  103-141    16-56  (331)
306 1w6u_A 2,4-dienoyl-COA reducta  93.8    0.18 7.9E-06   26.0   6.8   41  101-141    19-61  (302)
307 2hcy_A Alcohol dehydrogenase 1  93.8    0.13   6E-06   26.8   6.1   33  106-138   169-202 (347)
308 1jw9_B Molybdopterin biosynthe  93.7    0.07 3.1E-06   28.5   4.6   32  107-138    31-63  (249)
309 1kol_A Formaldehyde dehydrogen  93.7   0.098 4.4E-06   27.6   5.3   10  281-290   223-232 (398)
310 2o3j_A UDP-glucose 6-dehydroge  93.6   0.051 2.3E-06   29.4   3.7   36  106-141     8-45  (481)
311 3gpi_A NAD-dependent epimerase  93.6    0.12 5.3E-06   27.1   5.6   35  107-141     3-37  (286)
312 1dlj_A UDP-glucose dehydrogena  93.6    0.05 2.2E-06   29.4   3.7   32  109-141     2-33  (402)
313 1x13_A NAD(P) transhydrogenase  93.5   0.079 3.5E-06   28.2   4.5   32  108-139   173-204 (401)
314 2rir_A Dipicolinate synthase,   93.5   0.087 3.9E-06   27.9   4.7   22  268-289   160-181 (300)
315 2q3e_A UDP-glucose 6-dehydroge  93.4   0.049 2.2E-06   29.5   3.4   34  108-141     6-41  (467)
316 1txg_A Glycerol-3-phosphate de  93.4    0.08 3.6E-06   28.2   4.4   31  109-139     2-32  (335)
317 3eag_A UDP-N-acetylmuramate:L-  93.3    0.12 5.2E-06   27.1   5.2   34  106-139     3-37  (326)
318 2we8_A Xanthine dehydrogenase;  93.3    0.13   6E-06   26.8   5.5   26  266-291   205-230 (386)
319 2vhw_A Alanine dehydrogenase;   93.3    0.17 7.6E-06   26.1   5.9   30  108-137   169-198 (377)
320 1zud_1 Adenylyltransferase THI  93.2   0.094 4.2E-06   27.7   4.6   32  107-138    28-60  (251)
321 1j6u_A UDP-N-acetylmuramate-al  93.2   0.096 4.3E-06   27.7   4.6   35  107-141    12-47  (469)
322 1ja9_A 4HNR, 1,3,6,8-tetrahydr  93.2    0.17 7.8E-06   26.0   5.9   46   94-139     7-54  (274)
323 1rpn_A GDP-mannose 4,6-dehydra  93.2    0.14 6.2E-06   26.6   5.4   40  104-143    11-51  (335)
324 2qyt_A 2-dehydropantoate 2-red  93.2   0.043 1.9E-06   29.9   2.7   35  107-141     8-48  (317)
325 1t2d_A LDH-P, L-lactate dehydr  93.2    0.15 6.8E-06   26.4   5.6   36  106-141     3-39  (322)
326 1pzg_A LDH, lactate dehydrogen  93.1    0.17 7.4E-06   26.2   5.7   37  105-141     7-44  (331)
327 2axq_A Saccharopine dehydrogen  93.1   0.063 2.8E-06   28.8   3.6   40  103-142    19-59  (467)
328 2dph_A Formaldehyde dismutase;  93.1    0.12 5.4E-06   27.0   5.0   10  281-290   223-232 (398)
329 1pjc_A Protein (L-alanine dehy  93.0     0.2 9.1E-06   25.6   6.1   32  107-138   167-198 (361)
330 1tt5_B Ubiquitin-activating en  93.0    0.13 5.8E-06   26.8   5.1   33  107-139    40-73  (434)
331 1qyc_A Phenylcoumaran benzylic  93.0    0.12 5.4E-06   27.1   4.9   37  106-142     3-40  (308)
332 2i6t_A Ubiquitin-conjugating e  93.0   0.097 4.3E-06   27.6   4.4   36  107-142    14-51  (303)
333 1ez4_A Lactate dehydrogenase;   93.0    0.12 5.5E-06   27.0   4.9   35  107-141     5-41  (318)
334 3bmj_A Pteridine reductase; PT  93.0    0.14 6.4E-06   26.6   5.2   38  103-140    18-57  (288)
335 3hn7_A UDP-N-acetylmuramate-L-  93.0    0.12 5.3E-06   27.1   4.8   34  107-140    19-53  (524)
336 1vpd_A Tartronate semialdehyde  92.7   0.083 3.7E-06   28.1   3.7   37  105-141     3-39  (299)
337 2zqz_A L-LDH, L-lactate dehydr  92.7    0.15 6.7E-06   26.4   5.0   37  104-140     6-44  (326)
338 3i6i_A Putative leucoanthocyan  92.7    0.19 8.3E-06   25.9   5.5   37  105-141     8-45  (346)
339 3gr6_A Enoyl-[acyl-carrier-pro  92.6    0.12 5.5E-06   27.0   4.5   36  107-142    10-48  (260)
340 1pjq_A CYSG, siroheme synthase  92.6    0.13 5.7E-06   26.9   4.6   32  107-138    12-43  (457)
341 1hdo_A Biliverdin IX beta redu  92.6    0.16 7.3E-06   26.2   5.1   35  107-141     3-38  (206)
342 3ip1_A Alcohol dehydrogenase,   92.6    0.19 8.7E-06   25.7   5.5   32  105-136   212-243 (404)
343 2eez_A Alanine dehydrogenase;   92.6    0.23   1E-05   25.3   5.8   30  108-137   167-196 (369)
344 3c24_A Putative oxidoreductase  92.6    0.13 5.7E-06   26.9   4.5   37  106-142    10-47  (286)
345 2f1k_A Prephenate dehydrogenas  92.5    0.12 5.4E-06   27.0   4.3   35  109-143     2-36  (279)
346 3ew7_A LMO0794 protein; Q8Y8U8  92.5    0.17 7.6E-06   26.1   5.1   33  109-141     2-35  (221)
347 2hk9_A Shikimate dehydrogenase  92.5    0.16 7.3E-06   26.2   5.0   22  268-289   132-153 (275)
348 2ewd_A Lactate dehydrogenase,;  92.5    0.18 7.9E-06   26.0   5.1   35  107-141     4-39  (317)
349 1l7d_A Nicotinamide nucleotide  92.4    0.17 7.4E-06   26.2   4.9   34  258-291   165-198 (384)
350 1rjw_A ADH-HT, alcohol dehydro  92.4    0.11   5E-06   27.3   4.0   10  108-117    65-74  (339)
351 1nyt_A Shikimate 5-dehydrogena  92.4    0.22 9.6E-06   25.5   5.5   23  267-289   121-143 (271)
352 6ldh_A M4 APO-lactate dehydrog  92.4    0.28 1.3E-05   24.7   6.0   34  107-140    21-56  (330)
353 3dhn_A NAD-dependent epimerase  92.3    0.25 1.1E-05   25.1   5.7   34  107-140     4-38  (227)
354 1uay_A Type II 3-hydroxyacyl-C  92.3     0.2 8.7E-06   25.7   5.1   36  106-141     1-37  (242)
355 3lov_A Protoporphyrinogen oxid  92.2   0.052 2.3E-06   29.4   2.1   52  219-274   235-286 (475)
356 3eth_A Phosphoribosylaminoimid  92.2    0.17 7.6E-06   26.1   4.8   35  108-142     2-36  (355)
357 3h28_A Sulfide-quinone reducta  92.2   0.069 3.1E-06   28.6   2.7   58  221-281   201-260 (430)
358 1qor_A Quinone oxidoreductase;  92.1    0.14 6.4E-06   26.6   4.3   29  108-136   142-171 (327)
359 2ekp_A 2-deoxy-D-gluconate 3-d  92.1    0.22   1E-05   25.4   5.3   36  106-141     1-37  (239)
360 1y6j_A L-lactate dehydrogenase  92.0    0.23   1E-05   25.3   5.3   35  106-140     6-42  (318)
361 2gas_A Isoflavone reductase; N  92.0    0.18 7.9E-06   26.0   4.6   36  107-142     2-38  (307)
362 1y8q_B Anthracycline-, ubiquit  92.0    0.19 8.5E-06   25.8   4.8   33  107-139    17-50  (640)
363 2yr5_A Pro-enzyme of L-phenyla  92.0   0.084 3.7E-06   28.0   2.9   42  508-549   644-686 (721)
364 3ce6_A Adenosylhomocysteinase;  91.9    0.18 7.8E-06   26.0   4.6   27  441-473   440-467 (494)
365 2pd4_A Enoyl-[acyl-carrier-pro  91.9    0.16 7.2E-06   26.2   4.4   38  107-144     6-46  (275)
366 3ftp_A 3-oxoacyl-[acyl-carrier  91.7    0.33 1.5E-05   24.3   5.8   43   99-141    19-63  (270)
367 3h8l_A NADH oxidase; membrane   91.7    0.15 6.5E-06   26.5   4.0   58  219-281   217-274 (409)
368 1qyd_A Pinoresinol-lariciresin  91.7    0.22 9.9E-06   25.4   4.9   36  107-142     4-40  (313)
369 3d1l_A Putative NADP oxidoredu  91.7    0.17 7.7E-06   26.1   4.3   34  107-140    10-44  (266)
370 1e3i_A Alcohol dehydrogenase,   91.7    0.29 1.3E-05   24.7   5.4   10  109-118    72-81  (376)
371 1ek6_A UDP-galactose 4-epimera  91.6     0.3 1.3E-05   24.5   5.5   36  106-141     1-37  (348)
372 2nm0_A Probable 3-oxacyl-(acyl  91.6    0.34 1.5E-05   24.2   5.7   40  105-144    19-59  (253)
373 1lld_A L-lactate dehydrogenase  91.6    0.25 1.1E-05   25.1   5.1   35  106-140     6-42  (319)
374 3h2s_A Putative NADH-flavin re  91.6    0.24 1.1E-05   25.1   5.0   32  109-140     2-34  (224)
375 3h9u_A Adenosylhomocysteinase;  91.6     0.2 9.1E-06   25.6   4.6   11  265-275   266-276 (436)
376 3imf_A Short chain dehydrogena  91.5    0.34 1.5E-05   24.2   5.7   37  105-141     3-41  (257)
377 3fi9_A Malate dehydrogenase; s  91.5    0.26 1.2E-05   24.9   5.0   34  107-140     8-44  (343)
378 1hxh_A 3BETA/17BETA-hydroxyste  91.5    0.34 1.5E-05   24.2   5.6   37  105-141     3-41  (253)
379 2ldx_A APO-lactate dehydrogena  91.4    0.33 1.5E-05   24.3   5.5   34  107-140    19-54  (331)
380 2gjc_A Thiazole biosynthetic e  91.4   0.094 4.2E-06   27.7   2.7   43  502-544   277-326 (326)
381 3d0o_A L-LDH 1, L-lactate dehy  91.3    0.26 1.2E-05   25.0   4.9   35  106-140     5-41  (317)
382 1ldn_A L-lactate dehydrogenase  91.3    0.28 1.2E-05   24.8   5.1   35  106-140     5-41  (316)
383 1xgk_A Nitrogen metabolite rep  91.3    0.39 1.7E-05   23.8   5.8   36  106-141     4-40  (352)
384 3d64_A Adenosylhomocysteinase;  91.3    0.24 1.1E-05   25.1   4.7   24  268-291   280-303 (494)
385 2z04_A Phosphoribosylaminoimid  91.3    0.25 1.1E-05   25.1   4.8   35  108-142     2-36  (365)
386 3ggo_A Prephenate dehydrogenas  91.3    0.22 9.8E-06   25.4   4.5   37  106-142    32-70  (314)
387 3c1o_A Eugenol synthase; pheny  91.2    0.26 1.2E-05   25.0   4.8   37  106-142     3-40  (321)
388 2ehd_A Oxidoreductase, oxidore  91.2    0.21 9.4E-06   25.5   4.3   37  105-141     3-40  (234)
389 1hyh_A L-hicdh, L-2-hydroxyiso  91.2    0.26 1.1E-05   25.0   4.7   35  107-141     1-37  (309)
390 3goh_A Alcohol dehydrogenase,   91.0    0.26 1.2E-05   25.0   4.6   30  106-135   142-171 (315)
391 2gf2_A Hibadh, 3-hydroxyisobut  90.9    0.23   1E-05   25.2   4.4   34  109-142     2-35  (296)
392 2bgk_A Rhizome secoisolaricire  90.8    0.47 2.1E-05   23.3   5.8   38  104-141    12-51  (278)
393 1vi2_A Shikimate 5-dehydrogena  90.7    0.56 2.5E-05   22.9   6.1   31  108-138   127-158 (300)
394 2zyd_A 6-phosphogluconate dehy  90.7    0.27 1.2E-05   24.8   4.5  129  105-245    13-141 (480)
395 1y8q_A Ubiquitin-like 1 activa  90.6    0.31 1.4E-05   24.5   4.7   32  107-138    36-68  (346)
396 2p4q_A 6-phosphogluconate dehy  90.6    0.43 1.9E-05   23.6   5.4  131  103-246     6-138 (497)
397 2egg_A AROE, shikimate 5-dehyd  90.5    0.37 1.7E-05   24.0   5.1   23  267-289   143-165 (297)
398 1d7o_A Enoyl-[acyl-carrier pro  90.5     0.3 1.3E-05   24.5   4.6   34  107-140     8-44  (297)
399 1yqd_A Sinapyl alcohol dehydro  90.4    0.49 2.2E-05   23.2   5.6   11  107-117    79-89  (366)
400 3g0o_A 3-hydroxyisobutyrate de  90.3    0.31 1.4E-05   24.4   4.6   36  107-142     7-42  (303)
401 3cky_A 2-hydroxymethyl glutara  90.2    0.21 9.3E-06   25.5   3.6   35  108-142     5-39  (301)
402 1yj8_A Glycerol-3-phosphate de  90.2     0.3 1.3E-05   24.6   4.3   35  108-142    22-63  (375)
403 1x0v_A GPD-C, GPDH-C, glycerol  90.1    0.23   1E-05   25.2   3.8   37  107-143     8-51  (354)
404 3doj_A AT3G25530, dehydrogenas  90.0     0.7 3.1E-05   22.3   9.5   36  107-142    21-56  (310)
405 2dkn_A 3-alpha-hydroxysteroid   90.0    0.53 2.4E-05   23.0   5.5   32  110-141     4-36  (255)
406 1guz_A Malate dehydrogenase; o  90.0    0.45   2E-05   23.5   5.1   33  109-141     2-36  (310)
407 3gvp_A Adenosylhomocysteinase   89.9    0.35 1.6E-05   24.1   4.6   11  265-275   275-285 (435)
408 1ooe_A Dihydropteridine reduct  89.9    0.38 1.7E-05   23.9   4.7   35  107-141     3-38  (236)
409 1geg_A Acetoin reductase; SDR   89.9    0.47 2.1E-05   23.4   5.2   35  106-140     1-36  (256)
410 1yb1_A 17-beta-hydroxysteroid   89.9    0.66 2.9E-05   22.4   5.9   38  104-141    27-66  (272)
411 2b4q_A Rhamnolipids biosynthes  89.9    0.52 2.3E-05   23.1   5.4   36  106-141    27-64  (276)
412 3h7a_A Short chain dehydrogena  89.8    0.52 2.3E-05   23.1   5.3   35  107-141     7-42  (252)
413 1v8b_A Adenosylhomocysteinase;  89.8    0.32 1.4E-05   24.4   4.3   23  442-470   426-449 (479)
414 1rkx_A CDP-glucose-4,6-dehydra  89.7    0.59 2.6E-05   22.7   5.5   37  106-142     8-45  (357)
415 1smk_A Malate dehydrogenase, g  89.6    0.35 1.5E-05   24.2   4.3   35  106-140     7-44  (326)
416 1wly_A CAAR, 2-haloacrylate re  89.5    0.24 1.1E-05   25.2   3.5   28  109-136   148-176 (333)
417 2h78_A Hibadh, 3-hydroxyisobut  89.5    0.27 1.2E-05   24.8   3.7   35  108-142     4-38  (302)
418 1tt5_A APPBP1, amyloid protein  89.4    0.38 1.7E-05   23.9   4.4   32  107-138    32-64  (531)
419 1h5q_A NADP-dependent mannitol  89.3    0.54 2.4E-05   23.0   5.1   36  107-142    14-50  (265)
420 2pzm_A Putative nucleotide sug  89.3    0.52 2.3E-05   23.1   5.0   37  103-139    16-53  (330)
421 1qsg_A Enoyl-[acyl-carrier-pro  89.2    0.38 1.7E-05   23.9   4.3   37  107-143     9-48  (265)
422 1iow_A DD-ligase, DDLB, D-ALA\  89.2    0.38 1.7E-05   23.9   4.3   36  106-141     1-45  (306)
423 2p4h_X Vestitone reductase; NA  89.2    0.57 2.5E-05   22.8   5.2   36  108-143     2-38  (322)
424 1yxm_A Pecra, peroxisomal tran  89.1    0.81 3.6E-05   21.9   5.9   39  103-141    13-53  (303)
425 1a5z_A L-lactate dehydrogenase  89.1    0.44   2E-05   23.5   4.5   32  109-140     2-35  (319)
426 1leh_A Leucine dehydrogenase;   89.0    0.51 2.2E-05   23.1   4.8   24  269-292   177-200 (364)
427 2v7p_A L-lactate dehydrogenase  89.0    0.52 2.3E-05   23.1   4.8   32  109-140     2-35  (310)
428 2c07_A 3-oxoacyl-(acyl-carrier  88.9    0.55 2.4E-05   22.9   4.9   36  106-141    42-79  (285)
429 2v6b_A L-LDH, L-lactate dehydr  88.9    0.53 2.3E-05   23.0   4.8   32  109-140     2-35  (304)
430 2g5c_A Prephenate dehydrogenas  88.9    0.45   2E-05   23.5   4.5   36  108-143     2-39  (281)
431 2dq4_A L-threonine 3-dehydroge  88.9    0.75 3.4E-05   22.1   5.6   30  107-136   165-194 (343)
432 1ps9_A 2,4-dienoyl-COA reducta  88.8    0.19 8.5E-06   25.8   2.5   34  503-538   636-671 (671)
433 1yb4_A Tartronic semialdehyde   88.8    0.29 1.3E-05   24.6   3.5   34  109-142     5-38  (295)
434 2jjy_A Enoyl-[acyl-carrier-pro  88.8    0.49 2.2E-05   23.2   4.6   35  107-141     6-43  (268)
435 3krt_A Crotonyl COA reductase;  88.8    0.62 2.8E-05   22.6   5.1   20  116-135   239-258 (456)
436 2qio_A Enoyl-(acyl-carrier-pro  88.7    0.57 2.6E-05   22.8   4.9   36  107-142     6-44  (256)
437 2nlo_A Shikimate dehydrogenase  88.7    0.62 2.8E-05   22.6   5.1   23  267-289   148-170 (302)
438 2cfc_A 2-(R)-hydroxypropyl-COM  88.7    0.68   3E-05   22.3   5.3   36  106-141     1-37  (250)
439 2z1n_A Dehydrogenase; reductas  88.6    0.56 2.5E-05   22.9   4.8   35  107-141     7-42  (260)
440 3ek2_A Enoyl-(acyl-carrier-pro  88.6    0.41 1.8E-05   23.7   4.1   37  107-143    14-53  (271)
441 3k31_A Enoyl-(acyl-carrier-pro  88.5    0.47 2.1E-05   23.3   4.4   36  107-142    30-68  (296)
442 3ctm_A Carbonyl reductase; alc  88.5    0.81 3.6E-05   21.8   5.6   36  107-142    34-70  (279)
443 1mld_A Malate dehydrogenase; o  88.5    0.44   2E-05   23.5   4.2   33  108-140     1-36  (314)
444 1uls_A Putative 3-oxoacyl-acyl  88.4    0.84 3.7E-05   21.8   5.6   34  108-141     6-40  (245)
445 1gu7_A 2,4-dienoyl-COA reducta  88.3    0.93 4.1E-05   21.5   6.0   10  344-353   264-273 (364)
446 1hwx_A GDH, glutamate dehydrog  88.2    0.81 3.6E-05   21.8   5.4   21  272-292   251-271 (501)
447 3iup_A Putative NADPH:quinone   88.2    0.47 2.1E-05   23.3   4.2   19  107-125    67-85  (379)
448 1bgv_A Glutamate dehydrogenase  88.1    0.46   2E-05   23.4   4.1   21  272-292   237-257 (449)
449 3ijr_A Oxidoreductase, short c  88.1    0.95 4.2E-05   21.4   6.0   40  102-141    41-82  (291)
450 1f8f_A Benzyl alcohol dehydrog  88.0    0.72 3.2E-05   22.2   5.0   14  106-119    67-80  (371)
451 1v9l_A Glutamate dehydrogenase  87.9    0.61 2.7E-05   22.6   4.7   18   27-44     12-29  (421)
452 3grk_A Enoyl-(acyl-carrier-pro  87.8    0.68   3E-05   22.3   4.8   35  107-141    31-68  (293)
453 2h7i_A Enoyl-[acyl-carrier-pro  87.8    0.64 2.9E-05   22.5   4.7   34  107-140     7-43  (269)
454 3i1j_A Oxidoreductase, short c  87.8    0.99 4.4E-05   21.3   6.1   39  103-141     9-49  (247)
455 2qq5_A DHRS1, dehydrogenase/re  87.7    0.67   3E-05   22.4   4.8   37  105-141     2-40  (260)
456 1nff_A Putative oxidoreductase  87.7    0.97 4.3E-05   21.4   5.6   36  106-141     5-42  (260)
457 2nvu_B Maltose binding protein  87.7    0.66 2.9E-05   22.4   4.7   32  107-138   411-443 (805)
458 2z1m_A GDP-D-mannose dehydrata  87.7    0.86 3.8E-05   21.7   5.3   34  107-140     3-37  (345)
459 1cyd_A Carbonyl reductase; sho  87.7     0.7 3.1E-05   22.3   4.8   35  107-141     7-42  (244)
460 1xg5_A ARPG836; short chain de  87.6       1 4.5E-05   21.2   6.0   36  105-140    29-66  (279)
461 2d4a_B Malate dehydrogenase; a  87.6    0.71 3.2E-05   22.2   4.8   32  110-141     2-34  (308)
462 2bma_A Glutamate dehydrogenase  87.5    0.52 2.3E-05   23.1   4.1   23  269-291   256-278 (470)
463 2d5c_A AROE, shikimate 5-dehyd  87.3       1 4.5E-05   21.3   5.4   24  266-289   117-140 (263)
464 3a28_C L-2.3-butanediol dehydr  87.2    0.72 3.2E-05   22.2   4.7   33  109-141     3-37  (258)
465 1fjh_A 3alpha-hydroxysteroid d  87.2       1 4.4E-05   21.3   5.4   31  110-140     3-35  (257)
466 1i36_A Conserved hypothetical   87.2    0.71 3.2E-05   22.2   4.6   36  109-144     2-37  (264)
467 2dtx_A Glucose 1-dehydrogenase  87.2     1.1 4.8E-05   21.1   5.8   36  108-143     9-45  (264)
468 3gem_A Short chain dehydrogena  87.1    0.87 3.9E-05   21.7   5.0   35  107-141    27-62  (260)
469 3gk3_A Acetoacetyl-COA reducta  87.0       1 4.6E-05   21.2   5.4   34  107-140    24-59  (269)
470 1p77_A Shikimate 5-dehydrogena  87.0    0.81 3.6E-05   21.9   4.8   22  267-288   121-142 (272)
471 1ulu_A Enoyl-acyl carrier prot  87.0    0.79 3.5E-05   21.9   4.8   36  107-142     8-46  (261)
472 2o2s_A Enoyl-acyl carrier redu  87.0    0.72 3.2E-05   22.2   4.5   34  107-140     9-45  (315)
473 3enk_A UDP-glucose 4-epimerase  86.9       1 4.4E-05   21.3   5.2   30  109-138     7-37  (341)
474 1hdc_A 3-alpha, 20 beta-hydrox  86.9     1.1   5E-05   21.0   5.6   35  107-141     5-40  (254)
475 1npy_A Hypothetical shikimate   86.9    0.83 3.7E-05   21.8   4.8   25  266-290   120-144 (271)
476 1g0o_A Trihydroxynaphthalene r  86.8     1.1 5.1E-05   20.9   6.7   38  103-140    24-63  (283)
477 2jah_A Clavulanic acid dehydro  86.7     1.1 5.1E-05   20.9   5.7   38  104-141     3-42  (247)
478 1x1t_A D(-)-3-hydroxybutyrate   86.7     1.1   5E-05   20.9   5.4   33  108-140     5-38  (260)
479 1pgj_A 6PGDH, 6-PGDH, 6-phosph  86.5    0.77 3.4E-05   22.0   4.5   34  109-142     3-36  (478)
480 3ezl_A Acetoacetyl-COA reducta  86.5    0.88 3.9E-05   21.6   4.8   35  105-139    10-46  (256)
481 1c1d_A L-phenylalanine dehydro  86.5    0.89 3.9E-05   21.6   4.8   24  269-292   179-202 (355)
482 1oju_A MDH, malate dehydrogena  86.5    0.77 3.4E-05   22.0   4.5   32  109-140     2-35  (294)
483 3m1a_A Putative dehydrogenase;  86.4     1.1   5E-05   21.0   5.3   35  107-141     4-40  (281)
484 2zat_A Dehydrogenase/reductase  86.4     1.2 5.3E-05   20.8   5.7   38  104-141    10-49  (260)
485 1uzm_A 3-oxoacyl-[acyl-carrier  86.4       1 4.4E-05   21.3   5.0   37  107-143    15-52  (247)
486 1vl8_A Gluconate 5-dehydrogena  86.4     1.2 5.3E-05   20.8   5.6   35  105-139    18-54  (267)
487 1o5i_A 3-oxoacyl-(acyl carrier  86.3     1.2 5.1E-05   20.9   5.3   34  106-139    18-52  (249)
488 2p91_A Enoyl-[acyl-carrier-pro  86.3    0.67   3E-05   22.4   4.1   40  106-145    20-62  (285)
489 3kvo_A Hydroxysteroid dehydrog  86.2     1.2 5.4E-05   20.7   6.3   45  101-145    38-84  (346)
490 2pd6_A Estradiol 17-beta-dehyd  86.1     1.2 5.5E-05   20.7   5.9   37  103-139     2-40  (264)
491 2wsb_A Galactitol dehydrogenas  86.1    0.94 4.2E-05   21.4   4.8   33  107-139    11-44  (254)
492 3fpf_A Mtnas, putative unchara  86.1    0.42 1.9E-05   23.7   3.0   36  105-140   121-156 (298)
493 1o89_A YHDH, B3253, YHDH; stru  86.0    0.96 4.3E-05   21.4   4.8   41  101-141   162-203 (345)
494 2j8z_A Quinone oxidoreductase;  85.9    0.95 4.3E-05   21.4   4.7   39  102-140   158-197 (354)
495 2o23_A HADH2 protein; HSD17B10  85.9     1.3 5.6E-05   20.7   5.5   36  106-141    11-47  (265)
496 2gdz_A NAD+-dependent 15-hydro  85.8     1.3 5.7E-05   20.6   5.8   37  103-139     2-40  (267)
497 2o7s_A DHQ-SDH, bifunctional 3  85.8    0.79 3.5E-05   21.9   4.3   32  107-138   364-395 (523)
498 3dqp_A Oxidoreductase YLBE; al  85.7    0.78 3.5E-05   22.0   4.2   33  109-141     2-35  (219)
499 2qhx_A Pteridine reductase 1;   85.7     1.3 5.7E-05   20.6   5.5   37  104-140    42-80  (328)
500 1dhr_A Dihydropteridine reduct  85.7     1.3 5.7E-05   20.6   5.3   35  107-141     7-42  (241)

No 1  
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=100.00  E-value=1e-38  Score=259.54  Aligned_cols=404  Identities=20%  Similarity=0.227  Sum_probs=235.0

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH--CCCCCCCCCHHHH
Q ss_conf             87767766898798799999999996599089983588832110100012435423602345541--3556521240455
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFG--EGGAGTFSDGKLY  180 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g--~ggag~fsdgkl~  180 (549)
                      .+.|.-.|||||+|||||+||+.|++.|++|+||||++.+|+++... +.++|+.+|......+.  .+.++.+....  
T Consensus        22 ~~~m~yDVvVIG~G~aGl~AA~~a~~~G~~V~llEK~~~~Gg~~~~s-GgG~~n~tn~~~~~~~~~~~~~~~~~l~~~--   98 (447)
T 2i0z_A           22 SNAMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAIS-GGGRCNVTNRLPLDEIVKHIPGNGRFLYSA--   98 (447)
T ss_dssp             ---CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-GGGTCCCEECSCHHHHHHTCTBTGGGGHHH--
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHEEC-CCCCCCCCCCCCHHHHHHHCCCCHHHHHHH--
T ss_conf             68776897999954999999999986889889994898605454134-897600457876477873267760789989--


Q ss_pred             HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC
Q ss_conf             32200021178999999966895100136764100012799999999999966988998134332040587589999867
Q T0604           181 SQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN  260 (549)
Q Consensus       181 t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~  260 (549)
                          ...+....+++|+.++|++......++.++.+.....+++.+..++.+.+++|+++++++.|..+++++++|++.+
T Consensus        99 ----l~~~~~~~~~~~~~~~Gv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~v~~~~  174 (447)
T 2i0z_A           99 ----FSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQT  174 (447)
T ss_dssp             ----HHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETT
T ss_pred             ----HHCCCHHHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCEEEEECC
T ss_conf             ----8729999999999985996157678867530571588999999988735813894335779998617513542011


Q ss_pred             CCEEEECEEEEECCC-------CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEE
Q ss_conf             848970568993188-------7679999999669711148745686430354554087636544666677665247876
Q T0604           261 GEEIKSRHVVLAVGH-------SARDTFEMLHERGVYMEAKPFSVGFRIEHKQSMIDEARFGPNAGHPILGAADYKLVHH  333 (549)
Q Consensus       261 g~~i~ad~VVlAtGh-------sard~~~~l~~~Gi~~~~k~~a~G~rie~~~~~id~~q~g~~~~~~~l~~a~ykl~~~  333 (549)
                      +..+.++.||+|+|.       +..++..++...+....+-. ..-+........+...      ....+...+......
T Consensus       175 g~~~~~~~vi~a~Gg~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~  247 (447)
T 2i0z_A          175 GEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELF-PTEVPILSNEPFIRDR------SLQGLALRDINLSVL  247 (447)
T ss_dssp             CCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCEEEEE-ECSCCEECCCHHHHTT------TTTTCEEEEEEEEEC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCCCCCCCCHHHHH------HCCCCCCCCCCEEEE
T ss_conf             112246510013476445553668607899997488656663-2237754576066675------427742026505898


Q ss_pred             CCCCCEEEEEEECCCCEEEEEECCCCEEEECCCCHHHC---CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             58896326886167866887315786378788311112---666667347985034567777631025776999999996
Q T0604           334 CKNGRTVYSFCMCPGGTVVAATSEEGRVVTNGMSQYSR---AERNANSAIVVGISPEVDYPGDPLAGIRFQRELESNAYK  410 (549)
Q Consensus       334 ~~~g~~v~tfcmcpgG~vv~~~s~~g~~~~nGmS~~~r---~~~~an~al~v~i~~~~~~~~~~l~g~~~q~~lE~~a~~  410 (549)
                      ...+..   ++...+..++....-.+....++-++...   ...+..  +.....  .....+...  .++..++.+ ..
T Consensus       248 ~~~g~~---~~~~~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~--~~~~~~~~~-~~  317 (447)
T 2i0z_A          248 NPKGKA---IISHKMDMLFTHFGLSGPAALRCSQFVVKALKKFKTNT--IQMSID--ALPEENSEQ--LFQRMLKQM-KE  317 (447)
T ss_dssp             C----C---EEEEEEEEEECSSEEESHHHHHHHHHHHHHHHHHCCSC--EEEEEE--SCTTSCHHH--HHHHHHHHH-TT
T ss_pred             CCCCCE---EEEECCCEEEECCCCCCCHHHCCCHHHHHHHHHHCCCC--EEEECC--CCCCCCHHH--HHHHHHHHH-HH
T ss_conf             268855---11322643454144346334213399999998734684--222003--488889999--999999875-52


Q ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHCHHHHHHHHHHHHHHCCCCCC---CCCCCCEEEEEE
Q ss_conf             27876541343588884455421013443000576045262540318999999999886122205---524678379810
Q T0604           411 LGGENYDAPAQKIGDFLKGRDPSQLGDVEPSFTPGIKLTDLSKALPPFAVEAIREAIPAFDRKIK---GFASEDGLLTGV  487 (549)
Q Consensus       411 ~gg~~~~~p~Q~~~dfl~~~~s~~~~~~~~s~~~~~~~~~L~~~lP~~v~~~l~~~l~~f~~~~~---Gf~~~ea~l~GV  487 (549)
                      ...   ........+++.......+. ........    .....+|++....|.+.++.|...+.   +|..++++++||
T Consensus       318 ~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~l~~l~~~i~~~~~~~~g~~~~~~A~vT~GGV  389 (447)
T 2i0z_A          318 DPK---KGIKNVLKGYVPERYFLFLL-EKNEIDGS----EQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGV  389 (447)
T ss_dssp             STT---SBHHHHTTTSSCHHHHHHHH-HHTTCCTT----SBGGGSCHHHHHHHHHHHHHEEEEECEECCGGGCSSEEEEE
T ss_pred             CCC---HHHHHHHHHHHHHHHHHHHH-HHCCCCHH----HEHHHCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCC
T ss_conf             321---57777765431578999999-97288243----25543799999999999857866746878877379825850


Q ss_pred             EECEECCEEECCCCCCCCCCCCCCEEECC---CCCHHHH--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             01102662420488743026898542012---3533578--999999999999999999997
Q T0604           488 ETRTSSPVCIKRGKDFQSVNLKGFYPAGE---GAGYAGG--ILSAGIDGIKVAEAVARDIVA  544 (549)
Q Consensus       488 Etr~ssPvri~r~~tleS~~i~GLY~~GE---gaGyagG--I~saa~~G~~~a~~i~~~~~~  544 (549)
                      +++.++|      +|||++.|||||+|||   .+|+.||  |..|.+.|..||+.+++++..
T Consensus       390 ~~~~id~------~t~E~k~IpGLYAAGEv~dv~G~~GGy~l~~a~~sGriAG~~AA~~~k~  445 (447)
T 2i0z_A          390 SVKEINP------KEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAKM  445 (447)
T ss_dssp             CGGGEET------TTTEESSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             CHHHCCH------HHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             5212788------6760037998599896265733787899999999999999999999885


No 2  
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=100.00  E-value=1.4e-37  Score=252.49  Aligned_cols=368  Identities=17%  Similarity=0.200  Sum_probs=197.2

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      -.||||||||||++||+.||++|++|+|||++.+.-++.              .||+.++..+++++...     +....
T Consensus        22 YDVIVIGaG~AG~~AA~~aAr~G~kVlLie~~~~~iG~~--------------~cnp~igg~gkg~l~~E-----idalg   82 (641)
T 3cp8_A           22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARM--------------SCNPAIGGVAKGQITRE-----IDALG   82 (641)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC--------------SSCSEEECHHHHHHHHH-----HHHHT
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC--------------CCCCCCCHHHHHHHHHH-----HHHCC
T ss_conf             895998947999999999997899789993798764616--------------55664562479999867-----88522


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCC------CEECCHHHHHHHHHHHHHHHC-CCEEEEECCCCCCEECCCEEEEEEECC
Q ss_conf             1178999999966895100136764------100012799999999999966-988998134332040587589999867
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKP------HIGTFKLVTMIEKMRATIIEL-GGEIRFSTRVDDLHMEDGQITGVTLSN  260 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kp------h~gtd~~~~vv~~L~~~l~~~-G~~i~~~t~V~~i~~~~g~v~gV~t~~  260 (549)
                      .   .......+.|....++...+.      ....|+ ..+.+.|++.+++. +++|+.+ .|+++..+++++.+|++.+
T Consensus        83 g---~~~~~~d~~gi~~~~ln~~kgpAv~~~raq~Dr-~~y~~~~~~~L~~~~~v~i~~~-~V~~l~~~~~~v~gV~~~~  157 (641)
T 3cp8_A           83 G---EMGKAIDATGIQFRMLNRSKGPAMHSPRAQADK-TQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRS  157 (641)
T ss_dssp             C---SHHHHHHHHEEEEEEECSSSCTTTCEEEEEECH-HHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETT
T ss_pred             C---HHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHH-HHHHHHHHHHHHCCCCCEEEEE-EEEEEEEECCEEEEEEECC
T ss_conf             6---799999984016766541678751362766419-9999999999981899699984-7999985198676466134


Q ss_pred             CCEEEECEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH-H-HH-HHCCCCCCCCCCCCCCCEEEEEC---
Q ss_conf             848970568993188767999999966971114874568643035455-4-08-76365446666776652478765---
Q T0604           261 GEEIKSRHVVLAVGHSARDTFEMLHERGVYMEAKPFSVGFRIEHKQSM-I-DE-ARFGPNAGHPILGAADYKLVHHC---  334 (549)
Q Consensus       261 g~~i~ad~VVlAtGhsard~~~~l~~~Gi~~~~k~~a~G~rie~~~~~-i-d~-~q~g~~~~~~~l~~a~ykl~~~~---  334 (549)
                      |+++.|+.||+|||..++++.        ......+..|....++... + .. ..++........+. ...+....   
T Consensus       158 g~~i~a~~VVlATGt~~~~~l--------~~g~~~~~~g~~~g~~~~~~ls~~L~~lg~~~~r~~tgt-~~r~~~~sid~  228 (641)
T 3cp8_A          158 GRAIQAKAAILACGTFLNGLI--------HIGMDHFPGGRSTAEPPVEGLTESLASLGFSFGRLKTGT-PPRIDSRSVDY  228 (641)
T ss_dssp             SCEEEEEEEEECCTTCBTCEE--------EETTEEEECSSSTTSCCBCSHHHHHHHTTCCEEEEEEEE-CCEEEGGGSCT
T ss_pred             CCEEECCEEEECCCCCCCCCE--------ECCHHCCCCHHHCCCCCCCCCCHHHHHCCCCCEEEEECC-CCCCCCCEEEC
T ss_conf             768740369989788653310--------034011643232487645444077885066301244124-66334412305


Q ss_pred             --------CCCCEEEEEEECCCCEEEEEECCCCEEEECCCCHHHCCCCCCCCEEEEEECCCC-CCCCCCCHHHHHHHHHH
Q ss_conf             --------889632688616786688731578637878831111266666734798503456-77776310257769999
Q T0604           335 --------KNGRTVYSFCMCPGGTVVAATSEEGRVVTNGMSQYSRAERNANSAIVVGISPEV-DYPGDPLAGIRFQRELE  405 (549)
Q Consensus       335 --------~~g~~v~tfcmcpgG~vv~~~s~~g~~~~nGmS~~~r~~~~an~al~v~i~~~~-~~~~~~l~g~~~q~~lE  405 (549)
                              ..+..+++|..++...   ....+..+.        +....++..+.-++.... +.......+.+||+++|
T Consensus       229 ~~l~~q~Gd~~~~~fs~~~~~~~~---~~~l~~~~t--------~t~~~~~~~i~~~l~~~~~~~g~i~g~gpr~~~sie  297 (641)
T 3cp8_A          229 TIVTEQPGDVDPVPFSFSSTSVAN---RNLVSCYLT--------KTTEKTHDILRTGFDRSPLFTGKVQGVGPRYCPSIE  297 (641)
T ss_dssp             TTSEEECCCSSCCCSSSSCCCCGG---GCCCCEEEE--------ECCHHHHHHHHTTTTTCTTCCC---------CCCSH
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCC---HHHEECCCC--------CCCHHHHHHHHHCHHHCHHHHCCHHHHCCCCCCCHH
T ss_conf             343676367763525503554456---755025355--------555789999984825342430021000354776077


Q ss_pred             HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf             99996278765413435888844554210134430005760452625403189999999998861222055246783798
Q T0604           406 SNAYKLGGENYDAPAQKIGDFLKGRDPSQLGDVEPSFTPGIKLTDLSKALPPFAVEAIREAIPAFDRKIKGFASEDGLLT  485 (549)
Q Consensus       406 ~~a~~~gg~~~~~p~Q~~~dfl~~~~s~~~~~~~~s~~~~~~~~~L~~~lP~~v~~~l~~~l~~f~~~~~Gf~~~ea~l~  485 (549)
                      .+..+++....+..      |+..         +......+++++++++||..++..+.       +.+|||.+++.+.+
T Consensus       298 ~ki~rf~dk~~~~i------~le~---------e~~~~~~iy~~G~stsLp~~~q~~i~-------r~IpGLE~A~i~r~  355 (641)
T 3cp8_A          298 DKISRFPDKSSHHI------FLEP---------EGTDTVEMYVNGFSTSLPEDIQIAGL-------RSIPGLEEAKMIRP  355 (641)
T ss_dssp             HHHHHCCSCSCCEE------EEEE---------SSTTCCEEEEETCCCCSCHHHHHHHH-------TTSTTCTTCCEEEC
T ss_pred             HHHHHCCCCCHHHH------HCCC---------HHCCCCEEEECCCHHHCCHHHHHHHH-------CCCCCHHHEEEECC
T ss_conf             78642353112264------5050---------11438889546524428799999986-------25835433475047


Q ss_pred             E--EEECEECCEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1--0011026624204887430268985420123533578999999999999999999997
Q T0604           486 G--VETRTSSPVCIKRGKDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIVA  544 (549)
Q Consensus       486 G--VEtr~ssPvri~r~~tleS~~i~GLY~~GEgaGyagGI~saa~~G~~~a~~i~~~~~~  544 (549)
                      |  ||+++++|.++  ++|||||.++|||||||.+|+. |.+.||..|+-|+..+++++..
T Consensus       356 Gy~Veyd~idP~~L--~~TLEsK~i~GLF~AGqI~Gtt-Gy~eAaaqG~vAGiNAa~~~~g  413 (641)
T 3cp8_A          356 GYAIEYDFFHPWQI--RSTMETRPVENLFFAGQINGTS-GYEEAAAQGLMAGINAVRKILG  413 (641)
T ss_dssp             CEEEEEEEECGGGB--CTTSBBSSSBTEEECSGGGTBC-CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEECEECCCCC--CCCCEECCCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHHHHHCC
T ss_conf             63310021650246--8664432559979804326817-9999999999999999999669


No 3  
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=100.00  E-value=6.5e-34  Score=229.46  Aligned_cols=354  Identities=20%  Similarity=0.247  Sum_probs=224.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .-.|+|||||.||+.||+.||++|++|.|+....              ...-...||+.++..+.|.     |......-
T Consensus        28 ~~dViVIGgGlAG~EAA~~~Ar~G~~v~L~a~~~--------------~~~aelvCsnS~gg~akG~-----L~~Eidal   88 (651)
T 3ces_A           28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI--------------DTLGQMSCNPAIGGIGKGH-----LVKEVDAL   88 (651)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG--------------GGTTCCSSSSEEESTTHHH-----HHHHHHHT
T ss_pred             CCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCC--------------CCEEEEECCCCCCCCCCCH-----HHHHHHHH
T ss_conf             8858998987899999999981899879996564--------------5517976863358846107-----99999973


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCE------ECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC
Q ss_conf             2117899999996689510013676410------0012799999999999966988998134332040587589999867
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHI------GTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN  260 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~------gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~  260 (549)
                      ...+   .......++...++...+...      ..|+ ..+-+.+.+.+++...--..+..|++|..+++.++|+.+.+
T Consensus        89 ggl~---~~~ad~~~i~~r~ln~~kgpAv~alraqvDR-~~fs~~vt~~l~~~pni~v~~~eV~~l~~~~~~v~g~~~~~  164 (651)
T 3ces_A           89 GGLM---AKAIDQAGIQFRILNASKGPAVRATRAQADR-VLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQM  164 (651)
T ss_dssp             TCSH---HHHHHHHEEEEEEESTTSCGGGCEEEEEECH-HHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETT
T ss_pred             HHHH---HHHHHHHCCHHHHHCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHCCCCCEEEEEEEECEEECCCEEEEEECCC
T ss_conf             5599---9999995157876356878770857888879-99999999999749995999834222251188777775079


Q ss_pred             CCEEEECEEEEECCC--------------CHHHH-------HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             848970568993188--------------76799-------999996697111487456864303545540876365446
Q T0604           261 GEEIKSRHVVLAVGH--------------SARDT-------FEMLHERGVYMEAKPFSVGFRIEHKQSMIDEARFGPNAG  319 (549)
Q Consensus       261 g~~i~ad~VVlAtGh--------------sard~-------~~~l~~~Gi~~~~k~~a~G~rie~~~~~id~~q~g~~~~  319 (549)
                      |..+.++.||+|||-              .+|+.       -..+.+.++.+  .++.+|.........||...+....+
T Consensus       165 ~~~~~~~~viittGtf~~g~~~~g~~~~~~g~~~~~~~~~l~~~~~~~~~~~--~r~ktgtppri~~~sid~~~~~~~~~  242 (651)
T 3ces_A          165 GLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRV--GRLKTGTPPRIDARTIDFSVLAQQHG  242 (651)
T ss_dssp             SEEEEEEEEEECCSTTTCCEEECC-------------CCHHHHHHHTTTCCE--EEECCEECCEEEGGGSCGGGSEEECC
T ss_pred             CCEEECCEEEEECCCCCCCHHHHCHHHHCCCCCCCCCCCCHHHHHHHHCCCH--HHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf             9851124258844655665566234552277455311243158887614121--01036898301475557687754125


Q ss_pred             CCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEECCCCHHHCCCCCCCCEEEEEECCCC-CCCCCCCHHH
Q ss_conf             666776652478765889632688616786688731578637878831111266666734798503456-7777631025
Q T0604           320 HPILGAADYKLVHHCKNGRTVYSFCMCPGGTVVAATSEEGRVVTNGMSQYSRAERNANSAIVVGISPEV-DYPGDPLAGI  398 (549)
Q Consensus       320 ~~~l~~a~ykl~~~~~~g~~v~tfcmcpgG~vv~~~s~~g~~~~nGmS~~~r~~~~an~al~v~i~~~~-~~~~~~l~g~  398 (549)
                      ....+..++.-.  ... ...+..|     ++..+..+.          +.....        ++..+. +.+...-.|+
T Consensus       243 ~~~~~~~s~~~~--~~~-~~~~~~c-----~~~~t~~~~----------~~ii~~--------~~~~s~~~~G~i~~vGp  296 (651)
T 3ces_A          243 DNPMPVFSFMGN--ASQ-HPQQVPC-----YITHTNEKT----------HDVIRS--------NLDRSPMYAGVIEGVGP  296 (651)
T ss_dssp             CSSCCCSSTTCC--GGG-SCCCCCE-----EEEECCHHH----------HHHHHH--------TGGGC------------
T ss_pred             CCCCCCCCCCCC--CCC-CCCCCCC-----HHHHHCHHH----------HHHHHH--------CCCCCCCCCCCCCCCCC
T ss_conf             688753233455--566-8451010-----655415999----------999970--------44546522667645788


Q ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             77699999999627876541343588884455421013443000576045262540318999999999886122205524
Q T0604           399 RFQRELESNAYKLGGENYDAPAQKIGDFLKGRDPSQLGDVEPSFTPGIKLTDLSKALPPFAVEAIREAIPAFDRKIKGFA  478 (549)
Q Consensus       399 ~~q~~lE~~a~~~gg~~~~~p~Q~~~dfl~~~~s~~~~~~~~s~~~~~~~~~L~~~lP~~v~~~l~~~l~~f~~~~~Gf~  478 (549)
                      +||+++|.+..+++...++.+      ||+-  ..       .-...++++++++.||..+|..+.       +.|||+.
T Consensus       297 rycpsie~k~~rf~~r~~h~v------~Lep--Eg-------~~~~~~y~vGfqT~L~~~~Q~ri~-------r~IPGLE  354 (651)
T 3ces_A          297 RYCPSIEDKVMRFADRNQHQI------FLEP--EG-------LTSNEIYPNGISTSLPFDVQMQIV-------RSMQGME  354 (651)
T ss_dssp             ---CCHHHHHHHSCSSSCCEE------EEEE--SC-------TTCCEEEEETCCCCSCHHHHHHHH-------HTSTTCT
T ss_pred             CCCCCHHHCCCCCCCCCCCCE------EECC--CC-------CCCCEEECCCCCCCCCHHHHHHHH-------HCCCCHH
T ss_conf             999985550455776777501------4421--10-------478636106866778989999998-------6131310


Q ss_pred             CCCEEEEE--EEECEECCEEECCCCCCCCCCCCCCEEECC--C-CCH----HHHHHHHHHHHHHHHHHHH
Q ss_conf             67837981--001102662420488743026898542012--3-533----5789999999999999999
Q T0604           479 SEDGLLTG--VETRTSSPVCIKRGKDFQSVNLKGFYPAGE--G-AGY----AGGILSAGIDGIKVAEAVA  539 (549)
Q Consensus       479 ~~ea~l~G--VEtr~ssPvri~r~~tleS~~i~GLY~~GE--g-aGy----agGI~saa~~G~~~a~~i~  539 (549)
                      +++.+.+|  +|+++++|..+  +.|||+|.++||||||+  | .||    |+||    ++|+|||..+-
T Consensus       355 nAef~R~G~~hrndfi~P~~L--~~tLe~K~~~~Lf~AGQI~GteGYeEAAAqGl----~AGiNAa~~~~  418 (651)
T 3ces_A          355 NAKIVRPGYAIEYDFFDPRDL--KPTLESKFIQGLFFAGQINGTTGYEEAAAQGL----LAGLNAARLSA  418 (651)
T ss_dssp             TCCEEECCEEEEEEEECGGGB--CTTSBBSSSBTEEECSGGGTCCCHHHHHHHHH----HHHHHHHHHHT
T ss_pred             HEEEEEEEEEEEEEEECHHCC--CCCCEEEEECCEEEECCCCCCHHHHHHHHHHH----HHHHHHHHHHC
T ss_conf             035630001445203460005--76210245647687401037538889989799----99999999962


No 4  
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme MNMG; 5-carboxymethylaminomethyl uridine, wobble uridine, FAD, FAD-binding protein; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=100.00  E-value=2.3e-32  Score=219.79  Aligned_cols=360  Identities=19%  Similarity=0.201  Sum_probs=221.8

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .-.|+|||||.||+.||+.||++|++|+|+|-..+              ..-...||+.++..+.|     -|......-
T Consensus        27 ~ydViVIGgGlAG~EAA~~~Ar~G~~v~L~em~~~--------------~~aelvCsnS~gg~akG-----~L~~Ei~aL   87 (637)
T 2zxi_A           27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNAD--------------TIGQMSCNPAIGGIAKG-----IVVREIDAL   87 (637)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGG--------------GTTCCCSCSEEECTTHH-----HHHHHHHHH
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH--------------HEEEEECCCCCCCCCHH-----HHHHHHHHC
T ss_conf             58889989778999999999968997799970632--------------55785156766773426-----799999865


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCC------CCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC
Q ss_conf             2117899999996689510013676------4100012799999999999966988998134332040587589999867
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSK------PHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN  260 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~k------ph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~  260 (549)
                      ...   +...-...+++.+++...+      +....|+ ..+-+.+.+.+++...--..+..|++|..+++.+.+|.+.+
T Consensus        88 gsl---~~~~aD~~~i~~~~LN~~kgpAV~~~raq~DR-~~fs~~vt~~l~~~pnI~i~~~eV~~i~~~~~~i~~v~~~~  163 (637)
T 2zxi_A           88 GGE---MGKAIDQTGIQFKMLNTRKGKAVQSPRAQADK-KRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNL  163 (637)
T ss_dssp             TCS---HHHHHHHHEEEEEEESTTSCGGGCEEEEEECH-HHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETT
T ss_pred             CCH---HHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHCCCCCEEEEEEECCEECCCCEEEEEECCC
T ss_conf             099---99999883455765235666523771899969-99999999999739998999701013034895899743588


Q ss_pred             CCEEEECEEEEECCCC---------------------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             8489705689931887---------------------6799999996697111487456864303545540876365446
Q T0604           261 GEEIKSRHVVLAVGHS---------------------ARDTFEMLHERGVYMEAKPFSVGFRIEHKQSMIDEARFGPNAG  319 (549)
Q Consensus       261 g~~i~ad~VVlAtGhs---------------------ard~~~~l~~~Gi~~~~k~~a~G~rie~~~~~id~~q~g~~~~  319 (549)
                      |..+.++.||++||--                     +-.....+.+.|..+  ..|.+|.........||....-....
T Consensus       164 g~~~~~~~vv~~tGtfl~~~l~~~~~~~~~g~~~~~~~~~l~~~l~~~g~~~--~r~ktgtppr~~~~sid~~~~~~q~~  241 (637)
T 2zxi_A          164 GVEYKTKAVVVTTGTFLNGVIYIGDKMIPGGRLGEPRSEGLSDFYRRFDFPL--IRFKTGTPARLDKRTIDFSALEVAPG  241 (637)
T ss_dssp             SCEEECSEEEECCTTCBTCEEEETTEEEECSBTTBCCBCTHHHHHHHTTCCC--EEEEEEECCEEEGGGCCCTTSEEECC
T ss_pred             CCEEHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHCCCHHHHHHHHHCCCCC--CCHHCCCCCCCCCCHHHHHHHHCCCC
T ss_conf             8513454676641776643245431123454301000012789988607420--00110242112464120466521455


Q ss_pred             CCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEE-ECCCCHHHCCCCCCCCEEEEEECCCC-CCCCCCCHH
Q ss_conf             6667766524787658896326886167866887315786378-78831111266666734798503456-777763102
Q T0604           320 HPILGAADYKLVHHCKNGRTVYSFCMCPGGTVVAATSEEGRVV-TNGMSQYSRAERNANSAIVVGISPEV-DYPGDPLAG  397 (549)
Q Consensus       320 ~~~l~~a~ykl~~~~~~g~~v~tfcmcpgG~vv~~~s~~g~~~-~nGmS~~~r~~~~an~al~v~i~~~~-~~~~~~l~g  397 (549)
                      ........+  .  ..   .+..++.+..     ....+..++ +|- -.+.....        ++..+. +++.-.-.|
T Consensus       242 ~~~~~~~sf--~--~~---~~~~~~~~~~-----~~~~~c~~~~t~~-~~~~i~~~--------~~~~~~~~~G~ik~vG  300 (637)
T 2zxi_A          242 DDPPPKFSF--W--TE---PVGSYWFPKG-----KEQVNCWITYTTP-KTHEIIRK--------NLHRTALYGGLIKGIG  300 (637)
T ss_dssp             CSSCBCSCS--S--SS---STTCSBCCTT-----CCCCCEEEEECCH-HHHHHHHH--------TC--------------
T ss_pred             CCCCCCCCC--C--CC---CCCCCCCCCC-----HHHCCCCEEEECC-CCCEEHHH--------CCCCCCCCCCCEECCC
T ss_conf             567653111--2--44---2221013455-----1113221124066-43033742--------5352110156300137


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             57769999999962787654134358888445542101344300057604526254031899999999988612220552
Q T0604           398 IRFQRELESNAYKLGGENYDAPAQKIGDFLKGRDPSQLGDVEPSFTPGIKLTDLSKALPPFAVEAIREAIPAFDRKIKGF  477 (549)
Q Consensus       398 ~~~q~~lE~~a~~~gg~~~~~p~Q~~~dfl~~~~s~~~~~~~~s~~~~~~~~~L~~~lP~~v~~~l~~~l~~f~~~~~Gf  477 (549)
                      ++||+++|++..++..+.++..      ||+..  .    .   -...+++.++++.||..+|..+.       +.|||+
T Consensus       301 pr~cpsiedk~~~f~~k~~h~v------~LrpE--~----~---~~~~~ylvGfqTsL~~~eQ~rvf-------r~IPGL  358 (637)
T 2zxi_A          301 PRYCPSIEDKIVKFPDKERHQI------FLEPE--G----L---DTIEIYPNGLSTSLPEEVQWEMY-------RSIPGL  358 (637)
T ss_dssp             -CCCCSHHHHHHHCTTCSCCEE------EEEEC--C----S---SCCEEEEETCCCCSCHHHHHHHH-------TTSTTC
T ss_pred             CCCCCCCCCCCEECCCCCCCCE------EECCC--C----C---CCCEEEECCCCCCCHHHHHHHHH-------HCCHHH
T ss_conf             6556554311110266666413------44333--5----6---67789977866562278899998-------510444


Q ss_pred             CCCCEEEE--EEEECEECCEEECCCCCCCCCCCCCCEEECC--C-CCH----HHHHHHHHHHHHHHHHHHHH
Q ss_conf             46783798--1001102662420488743026898542012--3-533----57899999999999999999
Q T0604           478 ASEDGLLT--GVETRTSSPVCIKRGKDFQSVNLKGFYPAGE--G-AGY----AGGILSAGIDGIKVAEAVAR  540 (549)
Q Consensus       478 ~~~ea~l~--GVEtr~ssPvri~r~~tleS~~i~GLY~~GE--g-aGy----agGI~saa~~G~~~a~~i~~  540 (549)
                      .+++-+.+  ++|+++++|-++  +.|||+|.++||||||+  | .||    |+||    ++|||||..+..
T Consensus       359 EnAef~R~Gy~hrn~fi~p~~L--~~tLe~K~~~~lffAGQI~GteGY~EAaa~Gl----~AGina~~~~~~  424 (637)
T 2zxi_A          359 ENVVLIRPAYAIEYDVVPPTEL--YPTLETKKIRGLFHAGNFNGTTGYEEAAGQGI----VAGINAALRAFG  424 (637)
T ss_dssp             TTCCEEECCEEEEEEECCGGGB--CTTSBBSSSBTEEECGGGGTBCSHHHHHHHHH----HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHEECCHHHC--CHHHHHCCCCCEEEECEEECCHHHHHHHHHHH----HHHHHHHHHHCC
T ss_conf             3434410244443000453321--44777415787478331203055356679999----998999999729


No 5  
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, cytoplasm, FAD, flavoprotein; HET: MSE FAD GTT; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=99.97  E-value=2.8e-31  Score=212.89  Aligned_cols=350  Identities=15%  Similarity=0.088  Sum_probs=177.0

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      ++|+|||||+||+.||+.+||.|++|+|+|-.+..-     +.......+-...||+.+|..|.. -+.|-|...+..-.
T Consensus         2 ~~ViVIGgGhAG~EAA~a~Ar~G~~t~L~tm~~~~~-----t~a~~~~~ig~msCNPsiGG~g~~-~AkG~LvrEidaLg   75 (443)
T 3g5s_A            2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM-----TPAHGTDRFAEIVCSNSLGGEGET-NAKGLLQAEMRRAG   75 (443)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC-----CSSCCSSCTTCCCSCCEEEECSTT-CHHHHHHHHHHHHT
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCC-----CCCCCCCCEEEEECCCCCCCCCCC-CHHHHHHHHHHHCC
T ss_conf             817998897899999999997899789999514556-----767555660798666556898612-11568999999767


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEEC
Q ss_conf             11789999999668951001367641000127999999999999669889981343320405875899998678489705
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSR  267 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad  267 (549)
                      ...-.+.+   ..    .++...  .+..|+ ..+-..|++.+++...--..+..|++|                  .++
T Consensus        76 G~m~~~aD---~s----kgPA~~--a~q~DR-~~y~~~m~~~l~~~~nl~i~~~eV~~i------------------~~~  127 (443)
T 3g5s_A           76 SLVMEAAD---LA----RVPAGG--ALAVDR-EEFSGYITERLTGHPLLEVVREEVREI------------------PPG  127 (443)
T ss_dssp             CHHHHHHH---HS----EECCTT--EEEECH-HHHHHHHHHHHHTCTTEEEECSCCCSC------------------CSS
T ss_pred             CHHHHHHH---HH----CCCCCC--CCHHHH-HHHHHHHHHHHHCCCCEEEEEEEECCC------------------CCC
T ss_conf             99999999---86----699888--036419-999999999997189837763040145------------------655


Q ss_pred             EEEEECCCCHHHH-HHHH-HHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEE
Q ss_conf             6899318876799-9999-9669711148745686430354554087636544666677665247876588963268861
Q T0604           268 HVVLAVGHSARDT-FEML-HERGVYMEAKPFSVGFRIEHKQSMIDEARFGPNAGHPILGAADYKLVHHCKNGRTVYSFCM  345 (549)
Q Consensus       268 ~VVlAtGhsard~-~~~l-~~~Gi~~~~k~~a~G~rie~~~~~id~~q~g~~~~~~~l~~a~ykl~~~~~~g~~v~tfcm  345 (549)
                      .||+++|--.++. +.-+ ...|..+.  .+..+.........+|....-.....+.  ..+|.-..........+.||.
T Consensus       128 ~~il~tG~~~~~~~~~~~~~~~G~~~~--~~~~~~~p~~~~~si~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  203 (443)
T 3g5s_A          128 ITVLATGPLTSEALAEALKRRFGDHFL--AYYDAASPIVLYESIDLTKCFRAGRYGQ--SADYLNCPMTEEEYRRFHQAL  203 (443)
T ss_dssp             SEEECCCTTCCHHHHHHHHHHHCGGGE--EEEEEECCEEEGGGSCGGGCEECCCC-------CEEEEECHHHHHHHHHHH
T ss_pred             CEEEECCEECCCCEEEEEEEECCCCCC--CCCCCCCCHHHCCCCCCCCCEECCCCCC--CCCCCCCCCCCCCCCCCCCCC
T ss_conf             328831210255435211010376432--3545564211102344222232267766--556642115655566640000


Q ss_pred             CCCCEEEEEECCCCEEEECCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             67866887315786378788311112666667347985034567777631025776999999996278765413435888
Q T0604           346 CPGGTVVAATSEEGRVVTNGMSQYSRAERNANSAIVVGISPEVDYPGDPLAGIRFQRELESNAYKLGGENYDAPAQKIGD  425 (549)
Q Consensus       346 cpgG~vv~~~s~~g~~~~nGmS~~~r~~~~an~al~v~i~~~~~~~~~~l~g~~~q~~lE~~a~~~gg~~~~~p~Q~~~d  425 (549)
                      +......     +...+.         ..+.+..+.+... ..........|.+||++||++-  .+...++..      
T Consensus       204 ~~~~~~~-----~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~GP~~~~siedk~--~~~~~~hqi------  260 (443)
T 3g5s_A          204 LEAQRHT-----PHDWEK---------LEFFEACVPVEEL-ARRGYQTLLFGPMKPVGLVDPR--TGKEPFAVV------  260 (443)
T ss_dssp             HHCCBCC-----CC----------------CTTCCCHHHH-HHTCTTHHHHTTTCCTTCCBTT--TTBCCSEEE------
T ss_pred             CCCCCCC-----CCEEEE---------CCCCCCCCCHHHH-HCCCCCCCCCCCCCCCCCCCCC--CCCCCCCEE------
T ss_conf             3467657-----852584---------2444676431444-3048776566776786421587--787765124------


Q ss_pred             HHCCCCCCCCCCCCCCCCCCEEECCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE--EEEEECEECCEEECCCCCC
Q ss_conf             84455421013443000576045262540318999999999886122205524678379--8100110266242048874
Q T0604           426 FLKGRDPSQLGDVEPSFTPGIKLTDLSKALPPFAVEAIREAIPAFDRKIKGFASEDGLL--TGVETRTSSPVCIKRGKDF  503 (549)
Q Consensus       426 fl~~~~s~~~~~~~~s~~~~~~~~~L~~~lP~~v~~~l~~~l~~f~~~~~Gf~~~ea~l--~GVEtr~ssPvri~r~~tl  503 (549)
                      ||+-         +..-...++++.+|++||+.+|..+.       +.|||+.+++.+.  |+|||++++|.|.+ +.||
T Consensus       261 fLep---------Eg~~~~~iY~nG~STsLP~~vQ~~~l-------rsIpGLEna~i~RpGYaiEYdyi~p~~~L-~~tL  323 (443)
T 3g5s_A          261 QLRQ---------EDKAGRMWSLVGFQTGLKWPEQKRLI-------QMIPGLENAEIVRYGVMHRNTYLNAPRLL-GETL  323 (443)
T ss_dssp             EEEE---------CSTTSCEEEETTCCCCBCHHHHHHHH-------TTSTTCTTCCEEECCEEEEEEEECHHHHB-CTTS
T ss_pred             EECC---------CCCCCCEEEECCCCCCCCCCCHHHHH-------CCCCCCCCCEEEECCCEEEEEHHHHHHHH-HCCC
T ss_conf             6224---------44568579717975666740267675-------03401055346304520022114667765-0435


Q ss_pred             CCCCCCCCEEECC--C-CCH----HHHHHHHHHHHHHHHHHHH
Q ss_conf             3026898542012--3-533----5789999999999999999
Q T0604           504 QSVNLKGFYPAGE--G-AGY----AGGILSAGIDGIKVAEAVA  539 (549)
Q Consensus       504 eS~~i~GLY~~GE--g-aGy----agGI~saa~~G~~~a~~i~  539 (549)
                      |+|.++||||||+  | .||    |||+    ++|||||.++.
T Consensus       324 etK~i~gLf~AGQINGTtGYEEAAaQGl----iAGiNAa~~~~  362 (443)
T 3g5s_A          324 EFREAEGLYAAGVLAGVEGYLESAATGF----LAGLNAARKAL  362 (443)
T ss_dssp             EETTEEEEEECGGGGTBCSHHHHHHHHH----HHHHHHHHHHT
T ss_pred             CCCCCCCEEEEEEECCCCCHHHHHHHHH----HHHHHHHHHHC
T ss_conf             3135563799412336500035678899----99999999976


No 6  
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.96  E-value=1.4e-28  Score=196.07  Aligned_cols=174  Identities=22%  Similarity=0.262  Sum_probs=116.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC--------------CCCCC
Q ss_conf             7668987987999999999965990899835888321101000124354236023455413--------------55652
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGE--------------GGAGT  173 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~--------------ggag~  173 (549)
                      -.|||||+|+|||+||+.+++.|.+|+||||++..++......+.. +..   .+..+...              .....
T Consensus       122 ~DVvVIG~G~AGl~AAi~Aae~Ga~VillEK~~~~GG~s~~sgGg~-~~~---~t~~q~~~g~~Ds~e~~~~d~~~~~~~  197 (566)
T 1qo8_A          122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGM-NAV---GTKQQTAHGVEDKVEWFIEDAMKGGRQ  197 (566)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCE-ECS---SCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCC-CCC---CCHHHHHCCCCCCHHHHHHHHHHHCCC
T ss_conf             9989989559999999999977994899978999995298848170-305---898788448999999999999983178


Q ss_pred             CCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC---------CCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf             124045532200021178999999966895100---------13676410001279999999999996698899813433
Q T0604           174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEI---------LYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVD  244 (549)
Q Consensus       174 fsdgkl~t~~~~~~~~~~~vl~~~~~~Ga~~~i---------~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~  244 (549)
                      ..|..+.....+   ...+.++|+.++|++.+-         ....++|.+......+++.|++.+++.|++++++++++
T Consensus       198 ~~d~~lv~~~~~---~s~~~idwLe~~Gv~f~~~~~~~g~~~~r~~~~~~g~~~G~~l~~~L~~~a~~~Gv~i~~~t~v~  274 (566)
T 1qo8_A          198 QNDIKLVTILAE---QSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVV  274 (566)
T ss_dssp             CSCHHHHHHHHH---HHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEE
T ss_pred             CCCHHHHHHHHH---HHHHHHHHHHHCCCCCCCCCCCCCCEECEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCEEE
T ss_conf             783999999998---58999999998099887665778830011566407787644679999999985065541021145


Q ss_pred             CCEECCC-EEEEEEEC--CCC--EEEECEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             2040587-58999986--784--897056899318876799999996697
Q T0604           245 DLHMEDG-QITGVTLS--NGE--EIKSRHVVLAVGHSARDTFEMLHERGV  289 (549)
Q Consensus       245 ~i~~~~g-~v~gV~t~--~g~--~i~ad~VVlAtGhsard~~~~l~~~Gi  289 (549)
                      +++.+++ .+.++...  ++.  .+.++.||||||.-+.+ ++|+...+.
T Consensus       275 ~li~~~~g~v~gv~~~~~~g~~~~~~AkaVVLATGGf~~n-~em~~~~~~  323 (566)
T 1qo8_A          275 KLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN-KEMIAYYRP  323 (566)
T ss_dssp             EEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC-HHHHHHHCG
T ss_pred             EEEEECCCCCEEEEEECCCCCEEEECCCCEEECCCCCCCH-HHHHHHHCC
T ss_conf             5654112110000341134423662377236434543231-788875277


No 7  
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.96  E-value=1.2e-28  Score=196.40  Aligned_cols=179  Identities=19%  Similarity=0.187  Sum_probs=117.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH-----------HHHHHCCCCCCCCC
Q ss_conf             7668987987999999999965990899835888321101000124354236023-----------45541355652124
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPES-----------NVQFGEGGAGTFSD  176 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~-----------n~~~g~ggag~fsd  176 (549)
                      -.|||||+|+|||+||+.|+++|++|+||||++.+++++...++ +.+...+...           .......+...+.|
T Consensus       127 tDVvVVGgG~AGL~AAi~aae~G~~V~llEK~~~~Gg~s~~sgG-g~~~~~~~~~~~~g~~ds~e~~~~d~~~~~~~l~d  205 (572)
T 1d4d_A          127 TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAG-GMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND  205 (572)
T ss_dssp             CSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCS-CEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCC-CCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf             57799895799999999999889958999789989968888567-81426898888538899999999999984488888


Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC---------CCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCE
Q ss_conf             04553220002117899999996689510013---------676410001279999999999996698899813433204
Q T0604           177 GKLYSQVKDPNFYGRKVITEFVEAGAPEEILY---------VSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLH  247 (549)
Q Consensus       177 gkl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~---------~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~  247 (549)
                      ..+.....+   ...+.++||.++|++.....         ...++.++.....+++.|++.+.+.|++++++++|+++.
T Consensus       206 ~~lv~~~~e---~s~~~i~~L~~~Gv~f~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~L~~~~~~~gv~i~~~~~v~~l~  282 (572)
T 1d4d_A          206 PELVKVLAN---NSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRIL  282 (572)
T ss_dssp             HHHHHHHHH---THHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEE
T ss_pred             HHHHHHHHH---HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEE
T ss_conf             999999999---78999999998399865356657741231022268775159999999999997299799966677752


Q ss_pred             ECCCEEEEEEECC---CC--EEEECEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             0587589999867---84--89705689931887679999999669711
Q T0604           248 MEDGQITGVTLSN---GE--EIKSRHVVLAVGHSARDTFEMLHERGVYM  291 (549)
Q Consensus       248 ~~~g~v~gV~t~~---g~--~i~ad~VVlAtGhsard~~~~l~~~Gi~~  291 (549)
                      .+++++.+.....   +.  .+.++.||+|+|..+++ ++++...+...
T Consensus       283 ~~~~~~~g~~~~~~~~~~~~~~~akaVilAtGg~~~~-~~~~~~~~~~~  330 (572)
T 1d4d_A          283 EDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN-NERVSKYDPKL  330 (572)
T ss_dssp             EC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC-HHHHHHHCGGG
T ss_pred             CCCCCCCEEEEEECCCCCEEEEECCCEEECCCCCCCC-HHHHHHHCCCC
T ss_conf             0234310025775277733887236357654555432-89998518564


No 8  
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.96  E-value=3.2e-28  Score=193.75  Aligned_cols=173  Identities=17%  Similarity=0.160  Sum_probs=115.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC--------------CCC
Q ss_conf             766898798799999999996599089983588832110100012435423602345541355--------------652
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGG--------------AGT  173 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~gg--------------ag~  173 (549)
                      -.|||||+|+|||+||+.+++.|++|+||||++.+++......+.....    ..+.+...+.              ...
T Consensus       127 ~DVlVVG~G~AGl~AAi~Aae~GakVillEK~~~~GG~s~~s~GG~~~~----~t~~q~~~g~~Ds~e~~~~d~~~~g~~  202 (571)
T 1y0p_A          127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAA----WTDQQKAKKITDSPELMFEDTMKGGQN  202 (571)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECS----SCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCEE----CCHHHHHCCCCCCHHHHHHHHHHHCCC
T ss_conf             0499989879999999999988994899968999996599850481260----787887337999999999999986089


Q ss_pred             CCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC---------CCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf             12404553220002117899999996689510013---------676410001279999999999996698899813433
Q T0604           174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILY---------VSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVD  244 (549)
Q Consensus       174 fsdgkl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~---------~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~  244 (549)
                      ..|..+.....+   ...+.++|+.++|++.....         ...++.++.....+++.|++.+++.|++++++++|+
T Consensus       203 ~~d~~lv~~~~~---~s~e~idwL~~~Gv~f~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~~a~~~GV~i~~~t~v~  279 (571)
T 1y0p_A          203 INDPALVKVLSS---HSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGI  279 (571)
T ss_dssp             CSCHHHHHHHHH---HHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEE
T ss_pred             CCCHHHHHHHHH---HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEC
T ss_conf             887999999998---68999999997299976477668633332222236654441688888888764141689854411


Q ss_pred             CCEECCCEEEEEEE---CCCC--EEEECEEEEECCCCHHHHHHHHHHCC
Q ss_conf             20405875899998---6784--89705689931887679999999669
Q T0604           245 DLHMEDGQITGVTL---SNGE--EIKSRHVVLAVGHSARDTFEMLHERG  288 (549)
Q Consensus       245 ~i~~~~g~v~gV~t---~~g~--~i~ad~VVlAtGhsard~~~~l~~~G  288 (549)
                      +|+.+++++.++..   .++.  .+.++.||||||.-+++ ++|+.+.+
T Consensus       280 ~Li~d~~~~vg~v~~~~~~g~~~~i~AkaVILATGG~~~n-~e~~~~~~  327 (571)
T 1y0p_A          280 EVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKN-NERVAKLD  327 (571)
T ss_dssp             EEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTC-HHHHHHHC
T ss_pred             CCCEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCC-HHHHHHHC
T ss_conf             2200022111000002577707998503342466742235-89887642


No 9  
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PSI, protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.96  E-value=6.4e-26  Score=179.29  Aligned_cols=379  Identities=16%  Similarity=0.224  Sum_probs=177.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      ...|||||+|+|||+||+.|++.|++|+||||++.++++.. +++.++|+.+|....+..+....+.+....+      .
T Consensus         4 ~~DViVIG~G~AGl~AAi~aa~~G~~V~llEK~~~~g~~~~-~aggG~~n~~~~~~~~~~~~~~~~~~~~~~~------~   76 (401)
T 2gqf_A            4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL-MSGGGFCNFTNLEVTPAHYLSQNPHFVKSAL------A   76 (401)
T ss_dssp             ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH-HGGGGTCCCEESSCCGGGEECSCTTSTHHHH------H
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEE-ECCCCCCCCCCCCCCHHHCCCCCHHHHHHHH------H
T ss_conf             89589988559999999999878996899969988887247-8488633036787887770465677899998------6


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECC---CEEEEEEECCCCE
Q ss_conf             2117899999996689510013676410001279999999999996698899813433204058---7589999867848
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED---GQITGVTLSNGEE  263 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~---g~v~gV~t~~g~~  263 (549)
                      .+....+.++................+ ............................+.......   .....+.+ .+..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  154 (401)
T 2gqf_A           77 RYTNWDFISLVAEQGITYHEKELGQLF-CDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV-NSTQ  154 (401)
T ss_dssp             HSCHHHHHHHHHHTTCCEEECSTTEEE-ETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE-TTEE
T ss_pred             CCCHHHHHHHHHHCCCEEECCCCCCCC-CCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEEEEE-CCEE
T ss_conf             659889999986336123203676322-31001018999998877522210121122100011124420478840-5504


Q ss_pred             EEECEEEEECCCC-------HHHHHHHHHHCCCCC-CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECC
Q ss_conf             9705689931887-------679999999669711-14874568643035455408763654466667766524787658
Q T0604           264 IKSRHVVLAVGHS-------ARDTFEMLHERGVYM-EAKPFSVGFRIEHKQSMIDEARFGPNAGHPILGAADYKLVHHCK  335 (549)
Q Consensus       264 i~ad~VVlAtGhs-------ard~~~~l~~~Gi~~-~~k~~a~G~rie~~~~~id~~q~g~~~~~~~l~~a~ykl~~~~~  335 (549)
                      +.....+.+.+..       ............... .......+...+.......           .+............
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  223 (401)
T 2gqf_A          155 WQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLT-----------ALSGISLPVTITAL  223 (401)
T ss_dssp             EEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGG-----------GGTTCEEEEEEEET
T ss_pred             EEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHC-----------CCCCCCCCEEEEEC
T ss_conf             6530035303665556432346302234432765444544344322242212121-----------45664410377630


Q ss_pred             CCCEEEEEEECCCCEEEEEECCCCEEEECCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             89632688616786688731578637878831111266666734798503456777763102577699999999627876
Q T0604           336 NGRTVYSFCMCPGGTVVAATSEEGRVVTNGMSQYSRAERNANSAIVVGISPEVDYPGDPLAGIRFQRELESNAYKLGGEN  415 (549)
Q Consensus       336 ~g~~v~tfcmcpgG~vv~~~s~~g~~~~nGmS~~~r~~~~an~al~v~i~~~~~~~~~~l~g~~~q~~lE~~a~~~gg~~  415 (549)
                      .......           ...................................          ......+......... 
T Consensus       224 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-  281 (401)
T 2gqf_A          224 CGKSFYN-----------QLLFTHRGISGPAVLQISNYWQPTESVEIDLLPNH----------NVEEEINQAKQSSPKQ-  281 (401)
T ss_dssp             TSCEEEE-----------EEEECSSEEESHHHHHHTTTCCTTCCEEEESCSSS----------CHHHHHHHHHHHCTTS-
T ss_pred             CCCCCCC-----------CCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCHH----------HHHHHHHHHHHHHCCC-
T ss_conf             2332135-----------43344446655432120133212332000025424----------5788888765431011-


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHCHHHHHHHHHHHHHHCCCC---CCCCCCCCEEEEEEEECEE
Q ss_conf             5413435888844554210134430005760452625403189999999998861222---0552467837981001102
Q T0604           416 YDAPAQKIGDFLKGRDPSQLGDVEPSFTPGIKLTDLSKALPPFAVEAIREAIPAFDRK---IKGFASEDGLLTGVETRTS  492 (549)
Q Consensus       416 ~~~p~Q~~~dfl~~~~s~~~~~~~~s~~~~~~~~~L~~~lP~~v~~~l~~~l~~f~~~---~~Gf~~~ea~l~GVEtr~s  492 (549)
                            ...............  ................+.........+.++.+...   +++|..++.+++||+++++
T Consensus       282 ------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~t~GGv~~d~i  353 (401)
T 2gqf_A          282 ------MLKTILVRLLPKKLV--ELWIEQGIVQDEVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVTMGGVDTKVI  353 (401)
T ss_dssp             ------BHHHHHTTTSCHHHH--HHHHHTTSSCCCBGGGCCHHHHHHHHHHHHCEEECCSEECCTTTCSEEEEEECGGGB
T ss_pred             ------CCCCCCCCCCCCCCC--CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCEEEECEE
T ss_conf             ------000121112321232--013332024332101135778999999974666885686886557998486857829


Q ss_pred             CCEEECCCCCCCCCCCCCCEEECC---CCCHHHH--HHHHHHHHHHHHHHHHHH
Q ss_conf             662420488743026898542012---3533578--999999999999999999
Q T0604           493 SPVCIKRGKDFQSVNLKGFYPAGE---GAGYAGG--ILSAGIDGIKVAEAVARD  541 (549)
Q Consensus       493 sPvri~r~~tleS~~i~GLY~~GE---gaGyagG--I~saa~~G~~~a~~i~~~  541 (549)
                      +|      +||||+.|||||+|||   .+|+.||  +.+|+..|..||+.++++
T Consensus       354 ~~------~tle~~~i~GLYaaGEv~~i~G~tGGyn~~~A~~~G~~Ag~~~a~~  401 (401)
T 2gqf_A          354 SS------KTMESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISRQ  401 (401)
T ss_dssp             CT------TTCBBSSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHHTC
T ss_pred             CC------CCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             81------1104168699899896123536788699999999999999998659


No 10 
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur protein, oxidoreductase, redox enzyme; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 1zoy_A* 1zp0_A*
Probab=99.92  E-value=9.1e-24  Score=165.80  Aligned_cols=182  Identities=19%  Similarity=0.216  Sum_probs=119.9

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-CCCCCCCC-C---CHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             766898798799999999996599089983588832110100-01243542-3---602345541355652124045532
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT-FGFWRKRT-L---NPESNVQFGEGGAGTFSDGKLYSQ  182 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~-~~~~~~~~-~---~~~~n~~~g~ggag~fsdgkl~t~  182 (549)
                      -.|+|||+|.|||+||+.+++.|.+|+|+||+...+...... +++..... .   +++.....-.-+..-..|..+...
T Consensus        19 ~DVlVIG~G~AGl~AA~~a~~~G~~V~lv~K~~~~~s~s~~A~GGina~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~~   98 (621)
T 2h88_A           19 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIHY   98 (621)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             69899995599999999998779978999789999975799845674104799999999999999996378778999999


Q ss_pred             HHHHCCCHHHHHHHHHHCCCCCCCCCCCCC----------------------CEECCHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             200021178999999966895100136764----------------------1000127999999999999669889981
Q T0604           183 VKDPNFYGRKVITEFVEAGAPEEILYVSKP----------------------HIGTFKLVTMIEKMRATIIELGGEIRFS  240 (549)
Q Consensus       183 ~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kp----------------------h~gtd~~~~vv~~L~~~l~~~G~~i~~~  240 (549)
                      ..+.   ..+.++|+.++|.|..-..+++.                      |.+......++..|.+++.+.+++++.+
T Consensus        99 l~~~---a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~~~~~~R~~~~~d~tG~~i~~~L~~~~~~~~i~~~~~  175 (621)
T 2h88_A           99 MTEQ---APAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVE  175 (621)
T ss_dssp             HHHH---HHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEET
T ss_pred             HHHH---HHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             9999---9999999997699712279987732356761102567875550256247559999999999998515424777


Q ss_pred             CCCCCCEECCCEEEEEEE---CCCC--EEEECEEEEECCCCH-------------HHHHHHHHHCCCCCC
Q ss_conf             343320405875899998---6784--897056899318876-------------799999996697111
Q T0604           241 TRVDDLHMEDGQITGVTL---SNGE--EIKSRHVVLAVGHSA-------------RDTFEMLHERGVYME  292 (549)
Q Consensus       241 t~V~~i~~~~g~v~gV~t---~~g~--~i~ad~VVlAtGhsa-------------rd~~~~l~~~Gi~~~  292 (549)
                      +.+++++.+++++.|+..   .+|+  .|.|++||||||+.+             .|++.|..+.|..+.
T Consensus       176 ~~~~~ll~~~g~~~Gav~~~~~~g~~~~~~AkaVIlATGG~g~l~~~tt~~~~~tGdG~~mA~raGa~l~  245 (621)
T 2h88_A          176 YFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQ  245 (621)
T ss_dssp             EEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEE
T ss_pred             EEEEEEEEECCCCEEEEEEECCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
T ss_conf             8888999877953279999846993899970469976675446566778998867679999997697336


No 11 
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, tricarboxylic acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A*
Probab=99.92  E-value=2.2e-23  Score=163.45  Aligned_cols=182  Identities=23%  Similarity=0.205  Sum_probs=115.2

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-CCCCCC-CC---CHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             7668987987999999999965990899835888321101000-124354-23---602345541355652124045532
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTF-GFWRKR-TL---NPESNVQFGEGGAGTFSDGKLYSQ  182 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~-~~~~~~-~~---~~~~n~~~g~ggag~fsdgkl~t~  182 (549)
                      -.|||||+|.|||+||+.++++|.+|+|+|++...++...... ++.... ..   +++.....-..+.....|..+...
T Consensus         8 ~DVlVvG~G~AGl~AA~~A~~~G~~V~lveK~~~~~g~s~~a~GGi~a~~~~~~~Ds~e~~~~D~~~~g~~~~d~~lv~~   87 (588)
T 2wdq_A            8 FDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEY   87 (588)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             99999996499999999999779938999789989970788745466645899999999999999996378878999999


Q ss_pred             HHHHCCCHHHHHHHHHHCCCCCCCCCCCCC---------------------CEECCHHHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf             200021178999999966895100136764---------------------10001279999999999996698899813
Q T0604           183 VKDPNFYGRKVITEFVEAGAPEEILYVSKP---------------------HIGTFKLVTMIEKMRATIIELGGEIRFST  241 (549)
Q Consensus       183 ~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kp---------------------h~gtd~~~~vv~~L~~~l~~~G~~i~~~t  241 (549)
                      ..+   ...+.++|+.++|++......++.                     +.+......++..|.+++.+.|++++.++
T Consensus        88 l~~---~s~~~i~~Le~~Gv~f~r~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~i~~~L~~~~~~~gv~~~~~~  164 (588)
T 2wdq_A           88 MCK---TGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEW  164 (588)
T ss_dssp             HHH---HHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETE
T ss_pred             HHH---HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             999---99999999997799863179987722225665304678766626770788499999999999985498899978


Q ss_pred             CCCCCEE-CCCEEEEEEE---CCCC--EEEECEEEEECCCCH-------------HHHHHHHHHCCCCCC
Q ss_conf             4332040-5875899998---6784--897056899318876-------------799999996697111
Q T0604           242 RVDDLHM-EDGQITGVTL---SNGE--EIKSRHVVLAVGHSA-------------RDTFEMLHERGVYME  292 (549)
Q Consensus       242 ~V~~i~~-~~g~v~gV~t---~~g~--~i~ad~VVlAtGhsa-------------rd~~~~l~~~Gi~~~  292 (549)
                      .+++++. +|++++|+..   .+|+  .|.|++||||||+-+             .|++.|..+.|..+.
T Consensus       165 ~~~~ll~~~dg~v~g~~~~~~~~g~~~~i~AkaVILATGG~~~~~~~~~~~~~~tGdG~~ma~~aGA~l~  234 (588)
T 2wdq_A          165 YALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQ  234 (588)
T ss_dssp             EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEE
T ss_pred             EEEEEEECCCCCEEEEEEEECCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
T ss_conf             9999998058846745899878997899955819989999841676635899873199999997797164


No 12 
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, complex II, quinol, quinone; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A*
Probab=99.90  E-value=1.5e-20  Score=145.68  Aligned_cols=181  Identities=17%  Similarity=0.170  Sum_probs=115.9

Q ss_pred             CCEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH----HHHCCCCCCCCCHHHHH
Q ss_conf             7668987987999999999965--99089983588832110100012435423602345----54135565212404553
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQM--GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNV----QFGEGGAGTFSDGKLYS  181 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~--G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~----~~g~ggag~fsdgkl~t  181 (549)
                      -.|+|||+|.|||+||+.+++.  |.+|+|+||+...++......+..... .+....+    ..-..+.....|..+..
T Consensus         6 tDVlVIG~G~AGl~AA~~a~~~~~g~~V~lveK~~~~~s~s~~a~GGi~a~-~~~~Ds~e~~~~D~~~~g~~l~d~~lv~   84 (602)
T 1kf6_A            6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAV-AQDHDSFEYHFHDTVAGGDWLCEQDVVD   84 (602)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECC-CSTTCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred             CCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCC-CCCCCCHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             598999963999999999998689897999978999997289986555033-7999999999999999628988399999


Q ss_pred             HHHHHCCCHHHHHHHHHHCCCCCCCCCCCC----C----------CEECCHHHHHHHHHHHHHHHC-CCEEEEECCCCCC
Q ss_conf             220002117899999996689510013676----4----------100012799999999999966-9889981343320
Q T0604           182 QVKDPNFYGRKVITEFVEAGAPEEILYVSK----P----------HIGTFKLVTMIEKMRATIIEL-GGEIRFSTRVDDL  246 (549)
Q Consensus       182 ~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~k----p----------h~gtd~~~~vv~~L~~~l~~~-G~~i~~~t~V~~i  246 (549)
                      ...+   ...+.++|+.++|.+......++    +          |.+......++..+.+++.+. ++.+...+.+++|
T Consensus        85 ~l~~---~s~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~r~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L  161 (602)
T 1kf6_A           85 YFVH---HCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDI  161 (602)
T ss_dssp             HHHH---HHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEE
T ss_pred             HHHH---HHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEE
T ss_conf             9999---9999999999769974048999884103688614725766887622899999998774586014500688998


Q ss_pred             EECCCEEEEEEE---CCCC--EEEECEEEEECCCCH-------------HHHHHHHHHCCCCCC
Q ss_conf             405875899998---6784--897056899318876-------------799999996697111
Q T0604           247 HMEDGQITGVTL---SNGE--EIKSRHVVLAVGHSA-------------RDTFEMLHERGVYME  292 (549)
Q Consensus       247 ~~~~g~v~gV~t---~~g~--~i~ad~VVlAtGhsa-------------rd~~~~l~~~Gi~~~  292 (549)
                      ..++|++.|++.   .+|+  .+.|++||||||+-+             .|++.|..+.|..+.
T Consensus       162 ~~~dg~v~Gav~~~~~~g~~~~~~AkaVIlATGG~g~~~~~~t~~~~~tGdG~~mA~~aGA~l~  225 (602)
T 1kf6_A          162 LVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLR  225 (602)
T ss_dssp             EEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEE
T ss_pred             EECCCCEEEEEEEECCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE
T ss_conf             7079968999999758995899966827989998755664445899978699999997797861


No 13 
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.89  E-value=2.9e-20  Score=143.81  Aligned_cols=167  Identities=20%  Similarity=0.186  Sum_probs=109.9

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC--------HHHHHHHHCCCCCCCCCHHH
Q ss_conf             7668987987999999999965990899835888321101000124354236--------02345541355652124045
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLN--------PESNVQFGEGGAGTFSDGKL  179 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~--------~~~n~~~g~ggag~fsdgkl  179 (549)
                      -.|||||+|.|||+||+.++++|.+|+|+|+++..++.+....+.......+        ++.....-..+.....|..+
T Consensus         6 ~DVlVIGsG~AGl~AAi~A~e~G~~V~lveK~~~~~g~S~~A~GGi~a~~~~~~~~~~Ds~e~h~~Dt~~~g~~l~D~~l   85 (660)
T 2bs2_A            6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCDQKV   85 (660)
T ss_dssp             CSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSCHHH
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
T ss_conf             44899997799999999999779968999688999982777627312775646679998999999999996179876999


Q ss_pred             HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC-------------------------CC----------CEECCHHHHHHH
Q ss_conf             5322000211789999999668951001367-------------------------64----------100012799999
Q T0604           180 YSQVKDPNFYGRKVITEFVEAGAPEEILYVS-------------------------KP----------HIGTFKLVTMIE  224 (549)
Q Consensus       180 ~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~-------------------------kp----------h~gtd~~~~vv~  224 (549)
                      .....+   ...+.++|+.++|+|......+                         ++          |.+......+..
T Consensus        86 v~~l~~---~a~~~i~~L~~~Gv~F~r~~~G~~~~~~~~~~~~~~~~~~~~g~~~~r~~gG~~~~r~~~~~d~tG~~i~~  162 (660)
T 2bs2_A           86 ARMFVN---TAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLF  162 (660)
T ss_dssp             HHHHHH---HHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHHHHH
T ss_pred             HHHHHH---HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCHHHHH
T ss_conf             999999---99999999997599862067876222122233542212356661330136895533566323124625677


Q ss_pred             HHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEE---CCCC--EEEECEEEEECCCCH
Q ss_conf             9999999669889981343320405875899998---6784--897056899318876
Q T0604           225 KMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL---SNGE--EIKSRHVVLAVGHSA  277 (549)
Q Consensus       225 ~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t---~~g~--~i~ad~VVlAtGhsa  277 (549)
                      .|.+.+...+++++.++.++++..+++++.|++.   .+|+  .+.+++||+|||..+
T Consensus       163 ~L~~~~~~~~v~~~~~~~~~~l~~~~~~~~Gav~~~~~~G~~~~~~akavilAtGG~g  220 (660)
T 2bs2_A          163 AVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG  220 (660)
T ss_dssp             HHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred             HHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCEEECCCCCC
T ss_conf             6898642244202432343012246666500034315898189995285796345675


No 14 
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.88  E-value=1.8e-19  Score=138.90  Aligned_cols=170  Identities=16%  Similarity=0.070  Sum_probs=95.5

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHH----CCCEEEEEECCCCCCCCCCCCCCCCCCCCC------C----HHHHHHHHC
Q ss_conf             87767766898798799999999996----599089983588832110100012435423------6----023455413
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQ----MGFNPIIVERGKEVRERTKDTFGFWRKRTL------N----PESNVQFGE  168 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~----~G~~V~VlErg~~vg~r~~~~~~~~~~~~~------~----~~~n~~~g~  168 (549)
                      .+-....|||||+|.|||+||+.+++    .|.+|+|+||+...++.....+.......+      +    ++.....-.
T Consensus        18 ~e~ietDVlVIGsG~AGL~AAi~Aa~~a~~~G~~V~lveK~~~~~s~s~a~G~~~~~~~~~~~~~~~~~Ds~e~~~~d~~   97 (643)
T 1jnr_A           18 TEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVT   97 (643)
T ss_dssp             EEEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHH
T ss_pred             CEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             55887198998978899999999998537564979999788899751899889999751244467788899999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC---------CEECCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             55652124045532200021178999999966895100136764---------100012799999999999966988998
Q T0604           169 GGAGTFSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKP---------HIGTFKLVTMIEKMRATIIELGGEIRF  239 (549)
Q Consensus       169 ggag~fsdgkl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kp---------h~gtd~~~~vv~~L~~~l~~~G~~i~~  239 (549)
                      .....+.|..+.....+   ...+.++|+.++|++......++.         +.+......+...+  .....+++++.
T Consensus        98 ~~g~g~~d~~lv~~l~~---~s~~~v~~L~~~Gv~f~r~~~G~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~i~~  172 (643)
T 1jnr_A           98 LDMMGLAREDLVADYAR---HVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAA--KMAVGEENIYE  172 (643)
T ss_dssp             HHTTTCCCHHHHHHHHH---HHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHH--HHHHCGGGEEC
T ss_pred             HHCCCCCCHHHHHHHHH---HHHHHHHHHHHCCCCCCCCCCCCEEEECCCEECCCCCCHHHHHHHHH--HHHHCCCCEEE
T ss_conf             86089872999999999---89999999997799851489998853358521688985899999999--87634641244


Q ss_pred             ECCCCCCEECCC---EEEEEEE---CCCC--EEEECEEEEECCCCH
Q ss_conf             134332040587---5899998---6784--897056899318876
Q T0604           240 STRVDDLHMEDG---QITGVTL---SNGE--EIKSRHVVLAVGHSA  277 (549)
Q Consensus       240 ~t~V~~i~~~~g---~v~gV~t---~~g~--~i~ad~VVlAtGhsa  277 (549)
                      ++.+++++.+++   ++.|+..   .+|+  .|.|++||||||+.+
T Consensus       173 ~~~~~~ll~~~~~~~~v~Ga~~~d~~~G~~~~i~AkaVILATGG~~  218 (643)
T 1jnr_A          173 RVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT  218 (643)
T ss_dssp             SEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred             EEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECEEEECCCCCC
T ss_conf             7898889997587887999999975779479999476998678754


No 15 
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.86  E-value=2.8e-20  Score=143.94  Aligned_cols=176  Identities=20%  Similarity=0.170  Sum_probs=109.1

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH-H---HCCCCCCCCCHHHHHHHHH
Q ss_conf             68987987999999999965990899835888321101000124354236023455-4---1355652124045532200
Q T0604           110 PIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQ-F---GEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       110 VVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~-~---g~ggag~fsdgkl~t~~~~  185 (549)
                      |+|||+|+|||+||+.+++.|.+|+|+||+.. ++......+.... ..+....+. +   -.-......|..+.....+
T Consensus         2 VlViG~G~AGl~AA~~a~e~G~~V~l~eK~~~-ggss~~a~Ggi~a-~~~~~Ds~e~~~~D~~~~g~~~~d~~lv~~~~~   79 (472)
T 2e5v_A            2 IYIIGSGIAGLSAGVALRRAGKKVTLISKRID-GGSTPIAKGGVAA-SVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS   79 (472)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSTT-CSSGGGCCSCEEC-CCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred             EEEECCCHHHHHHHHHHHHCCCCEEEEECCCC-CCCHHHHCHHHEE-CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf             89996839999999999987991899968999-9864686625516-269999999999999997179888999999999


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCC---C----C-CCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEE
Q ss_conf             021178999999966895100136---7----6-4100012799999999999966988998134332040587589999
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYV---S----K-PHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVT  257 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~---~----k-ph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~  257 (549)
                      .   ..+.++|+.++|.+......   +    + .|.+......+++.|.+.+.+.+++++..+.+..+.. ++++.++.
T Consensus        80 ~---s~~~i~~L~~~Gv~f~~~~~~~gG~~~~R~~~~~~~~g~~i~~~l~~~~~~~gv~~~~~~~~~~l~~-~~~v~~~~  155 (472)
T 2e5v_A           80 E---AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLVEIRVK-DGKVTGFV  155 (472)
T ss_dssp             H---HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEEEEEEE-TTEEEEEE
T ss_pred             H---HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC-CCCEEEEE
T ss_conf             9---9999999998099742046777986356325757983178999999998750676330023334422-68436888


Q ss_pred             ECC-CCEEEECEEEEECCCCHH-------------HHHHHHHHCCCCC
Q ss_conf             867-848970568993188767-------------9999999669711
Q T0604           258 LSN-GEEIKSRHVVLAVGHSAR-------------DTFEMLHERGVYM  291 (549)
Q Consensus       258 t~~-g~~i~ad~VVlAtGhsar-------------d~~~~l~~~Gi~~  291 (549)
                      ... +..+.+++||||||+-++             |++.|..+.|..+
T Consensus       156 ~~~~~~~~~akaVILATGG~~~~~~~~~~~~~~tGdG~~mA~~aGA~l  203 (472)
T 2e5v_A          156 TEKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTIL  203 (472)
T ss_dssp             ETTTEEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCE
T ss_pred             ECCCCEEEECCEEEEECCCHHCCCHHCCCCCCCCHHHHHHHHHCCCCC
T ss_conf             425417997355999358611070111589997359999999859833


No 16 
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.85  E-value=5.1e-21  Score=148.59  Aligned_cols=181  Identities=17%  Similarity=0.176  Sum_probs=109.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH-HHH---CCCCCCCCCHHHHHH
Q ss_conf             7766898798799999999996599089983588832110100012435423602345-541---355652124045532
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNV-QFG---EGGAGTFSDGKLYSQ  182 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~-~~g---~ggag~fsdgkl~t~  182 (549)
                      .-.|+|||+|+|||+||+.+++.| +|+|+||++..++.+....+.... ..+....+ .+.   .-+.....|..+...
T Consensus         8 ~~DVlVIG~G~AGl~AA~~a~~~g-~VvlleK~~~~gG~s~~A~gGi~a-~~~~~Ds~e~~~~Dt~~~g~gl~d~~lv~~   85 (540)
T 1chu_A            8 SCDVLIIGSGAAGLSLALRLADQH-QVIVLSKGPVTEGSTFYAQGGIAA-VFDETDSIDSHVEDTLIAGAGICDRHAVEF   85 (540)
T ss_dssp             ECSEEEECCSHHHHHHHHHHTTTS-CEEEECSSCTTC--------------CCSHHHHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred             CCCEEEECCHHHHHHHHHHHHHCC-CEEEEECCCCCCCCHHHHHCCCEE-ECCCCCCHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             389899996099999999975369-889998889999707787044017-279999999999999996589878999999


Q ss_pred             HHHHCCCHHHHHHHHHHCCCCCCCCCC-------------CCC-----CEECCHHHHHHHHHHH-HHHHCCCEEEEECCC
Q ss_conf             200021178999999966895100136-------------764-----1000127999999999-999669889981343
Q T0604           183 VKDPNFYGRKVITEFVEAGAPEEILYV-------------SKP-----HIGTFKLVTMIEKMRA-TIIELGGEIRFSTRV  243 (549)
Q Consensus       183 ~~~~~~~~~~vl~~~~~~Ga~~~i~~~-------------~kp-----h~gtd~~~~vv~~L~~-~l~~~G~~i~~~t~V  243 (549)
                      ..+.   ..+.++|+.++|++......             ++.     +........++..+.+ .++..++++..++.+
T Consensus        86 l~~~---s~~~i~~L~~~Gv~f~~~~~~~~~~~~~~~~~gghs~~R~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~  162 (540)
T 1chu_A           86 VASN---ARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNA  162 (540)
T ss_dssp             HHHH---HHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEE
T ss_pred             HHHH---HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             9999---9999999997699776234777764311223589677703751687763289999999997599389963146


Q ss_pred             CCCEECC-------CEEEEEEEC---CCC--EEEECEEEEECCCC-------------HHHHHHHHHHCCCCCC
Q ss_conf             3204058-------758999986---784--89705689931887-------------6799999996697111
Q T0604           244 DDLHMED-------GQITGVTLS---NGE--EIKSRHVVLAVGHS-------------ARDTFEMLHERGVYME  292 (549)
Q Consensus       244 ~~i~~~~-------g~v~gV~t~---~g~--~i~ad~VVlAtGhs-------------ard~~~~l~~~Gi~~~  292 (549)
                      ++++.++       +++.|+..-   +++  .+.|++||+|||..             ..|++.|..+.|..+.
T Consensus       163 ~~li~~d~~~~~~~~~v~Ga~~~~~~~g~~~~i~AkavilAtGG~~~~~~~t~~~~~~tGdG~~mA~~aGA~l~  236 (540)
T 1chu_A          163 VDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVA  236 (540)
T ss_dssp             EEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGSSSBSCGGGCSCHHHHHHHHTTCCEE
T ss_pred             EEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
T ss_conf             89998536666676469999999758980999974278870455555312367999974299999998498714


No 17 
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.85  E-value=9.6e-24  Score=165.67  Aligned_cols=127  Identities=9%  Similarity=0.046  Sum_probs=92.9

Q ss_pred             CCCCCHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             82689899999999985888789177079986202334797269999999865605888874025655422667665667
Q T0604            20 PLDHEEGALLDAITKKLGIPAEKVISFNVFRRGYDARKKTNIHLIYTLDIIVEGDETALLAKFANDPHVRQTPDMEYKFV   99 (549)
Q Consensus        20 ~~~~~~~~l~~~~~~~l~~~~~~i~~~~i~rks~DaR~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (549)
                      .++..++.|.+..+|.++++|..|+|+.|++|..+.|..+...|+.|..|+...........|..||.+..+.+..+...
T Consensus       302 ~~~~ae~~l~~g~~D~v~~gR~~iadP~~~~k~~~g~~~~ir~C~~Cn~~~~~~~~~~~~~~C~~Np~~g~e~~~~~~~~  381 (729)
T 1o94_A          302 DPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQGRYDDIRVCIGCNVCISRWEIGGPPMICTQNATAGEEYRRGWHPE  381 (729)
T ss_dssp             CHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHHSSSCCCCSSCTTTTTHHHHCCCTT
T ss_pred             CHHHHHHHHHCCCCCEEECCHHHHCCCCHHHHHHCCCCCCCCCCHHHHCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf             99999999987998746305698719306667445994336556323251112643698715624765563320146863


Q ss_pred             CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
Q ss_conf             77887767766898798799999999996599089983588832110
Q T0604           100 AKAPENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT  146 (549)
Q Consensus       100 ~~~~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~  146 (549)
                      ...+...+++|+|||||||||.||+.|+++|++|+|+|+.+.+|+..
T Consensus       382 ~~~~~~~~kkV~VIGaGPAGL~AA~~lA~~G~~VtL~Ek~~~lGG~l  428 (729)
T 1o94_A          382 KFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHL  428 (729)
T ss_dssp             CCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTH
T ss_pred             CCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
T ss_conf             11115668669998316789999999975799489996305421001


No 18 
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.84  E-value=3.2e-18  Score=131.06  Aligned_cols=55  Identities=20%  Similarity=0.390  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECC
Q ss_conf             79999999999996698899813433204058758999986784897056899318
Q T0604           219 LVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVG  274 (549)
Q Consensus       219 ~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtG  274 (549)
                      ...+++.|.+.+++.|++|+++++|++|..+++++++|.+ +|+++.+|.||.+.+
T Consensus       195 ~~~i~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~v~~v~~-~g~~~~ad~VI~~~~  249 (425)
T 3ka7_A          195 CKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLG  249 (425)
T ss_dssp             HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSC
T ss_pred             CCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCC-CCEEECCCCCCCCCC
T ss_conf             5532100000013344101217742475410322223321-110110332346788


No 19 
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.82  E-value=2.8e-22  Score=156.47  Aligned_cols=175  Identities=14%  Similarity=0.132  Sum_probs=117.4

Q ss_pred             CCCCCHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             82689899999999985888789177079986202334797269999999865605888874025655422667665667
Q T0604            20 PLDHEEGALLDAITKKLGIPAEKVISFNVFRRGYDARKKTNIHLIYTLDIIVEGDETALLAKFANDPHVRQTPDMEYKFV   99 (549)
Q Consensus        20 ~~~~~~~~l~~~~~~~l~~~~~~i~~~~i~rks~DaR~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (549)
                      .++..|+.|.+..+|.+++.|..|+|+.|++|..+.|-.+..+|+.|..|+..    .........|.+++....+.+.+
T Consensus       291 ~~~~ae~~l~~g~~D~v~~gR~~iadP~~~~k~~~g~~~~i~~C~~c~~~~~~----~~~~~~~~~C~~np~~g~E~~~~  366 (671)
T 1ps9_A          291 DPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLD----QIFVGKVTSCLVNPRACHETKMP  366 (671)
T ss_dssp             SHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTTCGGGCCCCCCCCTTTHH----HHHTTCCCCCSSCTTTTCTTTSC
T ss_pred             CHHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHH----HHHCCCCCEECCCCCCCCCEECC
T ss_conf             79999999987998764113598709438999974996667736306788741----22159838508985358712504


Q ss_pred             CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH
Q ss_conf             77887767766898798799999999996599089983588832110100012435423602345541355652124045
Q T0604           100 AKAPENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKL  179 (549)
Q Consensus       100 ~~~~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl  179 (549)
                      . .+...++||+|||||||||.||+.|+++|++|+|+|+.+.+|+.......                            
T Consensus       367 ~-~~a~~~kkVvVIGaGPAGL~AA~~aa~~G~~Vtl~E~~~~lGG~~~~~~~----------------------------  417 (671)
T 1ps9_A          367 I-LPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQ----------------------------  417 (671)
T ss_dssp             C-CSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTT----------------------------
T ss_pred             C-CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCC----------------------------
T ss_conf             3-33344645999897477899999998721764799421543305732135----------------------------


Q ss_pred             HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEEC
Q ss_conf             53220002117899999996689510013676410001279999999999996698899813433204058758999986
Q T0604           180 YSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS  259 (549)
Q Consensus       180 ~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~  259 (549)
                                            .|           .......+++.+...+.+.++++++++.++.-.            
T Consensus       418 ----------------------~p-----------~~~~~~~~~~~~~~~~~~~gv~v~~~~~v~~~~------------  452 (671)
T 1ps9_A          418 ----------------------IP-----------GKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQ------------  452 (671)
T ss_dssp             ----------------------ST-----------TCTTHHHHHHHHHHHHHHHTCEEEESCCCCSSS------------
T ss_pred             ----------------------CC-----------CCHHHHHHHHHHHHHHHHHHCEEEEECCCCHHH------------
T ss_conf             ----------------------76-----------412456678999987552201042101233111------------


Q ss_pred             CCCEEEECEEEEECCC
Q ss_conf             7848970568993188
Q T0604           260 NGEEIKSRHVVLAVGH  275 (549)
Q Consensus       260 ~g~~i~ad~VVlAtGh  275 (549)
                         ....|.||+|||.
T Consensus       453 ---~~~~D~VIiATG~  465 (671)
T 1ps9_A          453 ---LQAFDETILASGI  465 (671)
T ss_dssp             ---SCCSSEEEECCCE
T ss_pred             ---CCCCCCEEEECCC
T ss_conf             ---0046844983277


No 20 
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.79  E-value=6.2e-17  Score=122.97  Aligned_cols=168  Identities=14%  Similarity=0.036  Sum_probs=91.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCC------CEEEEEECCCCCCCCCCCCCCCCCC---CCCCHHHHHHHHCCCCCCCCCH
Q ss_conf             776689879879999999999659------9089983588832110100012435---4236023455413556521240
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMG------FNPIIVERGKEVRERTKDTFGFWRK---RTLNPESNVQFGEGGAGTFSDG  177 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G------~~V~VlErg~~vg~r~~~~~~~~~~---~~~~~~~n~~~g~ggag~fsdg  177 (549)
                      .-.|||||+|.|||+||+.++++|      .+|+|+||++..+......+..+..   +.-+++..............|.
T Consensus        22 ~~DVlVVGsG~AGl~AAi~a~~~G~~~~~~a~V~lleK~~~~~sg~~~~G~~~~~~~~~~ds~e~~~~d~~~~~~gl~d~  101 (662)
T 3gyx_A           22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLVRE  101 (662)
T ss_dssp             ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCCCH
T ss_pred             ECCEEEECCCHHHHHHHHHHHHHCHHCCCCCEEEEEECCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCHH
T ss_conf             54689989888999999999984321257986999978899975389998888700789999999999999971898769


Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC--------------------CC-----CEECCHHHHHHHHHHHHHHH
Q ss_conf             455322000211789999999668951001367--------------------64-----10001279999999999996
Q T0604           178 KLYSQVKDPNFYGRKVITEFVEAGAPEEILYVS--------------------KP-----HIGTFKLVTMIEKMRATIIE  232 (549)
Q Consensus       178 kl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~--------------------kp-----h~gtd~~~~vv~~L~~~l~~  232 (549)
                      .+.....+   ...+.++|+.++|++.......                    ++     +........+...+.+.+.+
T Consensus       102 ~lv~~~~~---~a~~~v~~Le~~Gv~f~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~~~G~~i~~~~~~~~~~  178 (662)
T 3gyx_A          102 DLIYDLGR---HVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKN  178 (662)
T ss_dssp             HHHHHHHH---HHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHH
T ss_pred             HHHHHHHH---HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             99999999---899999999985998633488973023123556673215687515557774366289999999999972


Q ss_pred             --CCCEEEEECCCCCCEE---CCCEEEEEEE---CCCC--EEEECEEEEECCCCH
Q ss_conf             --6988998134332040---5875899998---6784--897056899318876
Q T0604           233 --LGGEIRFSTRVDDLHM---EDGQITGVTL---SNGE--EIKSRHVVLAVGHSA  277 (549)
Q Consensus       233 --~G~~i~~~t~V~~i~~---~~g~v~gV~t---~~g~--~i~ad~VVlAtGhsa  277 (549)
                        .++.+...+.+++++.   ++++++|+..   .+|+  .+.++.||||||+.+
T Consensus       179 ~~~~~~i~~~~~~~~ll~~~~~~g~v~G~~~~~~~~g~~~~~~akaVILATGG~~  233 (662)
T 3gyx_A          179 ALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV  233 (662)
T ss_dssp             HHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred             CCCCEEEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCEEEECCCCCC
T ss_conf             4686089985444678884057870567898845888189995174999227522


No 21 
>2cul_A Glucose-inhibited division protein A-related protein, probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus HB8} SCOP: c.3.1.7
Probab=99.77  E-value=1.7e-18  Score=132.81  Aligned_cols=162  Identities=19%  Similarity=0.166  Sum_probs=104.9

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      -.||||||||||+.||+.+||.|.+|+||+..-+.              .-...||+..+..+.+.     +...+ +  
T Consensus         4 yDVIVVGaGhAG~eAA~aaAr~G~ktlLit~~ld~--------------ig~m~cnpa~Gg~~kg~-----lvrei-D--   61 (232)
T 2cul_A            4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA--------------VMMPFLPPKPPFPPGSL-----LERAY-D--   61 (232)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG--------------TTCCSSCCCSCCCTTCH-----HHHHC-C--
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH--------------HCCCCCCCCCCCCCCCE-----EEEEE-C--
T ss_conf             89899996889999999999889908999556678--------------42567787556477733-----79997-1--


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEEC
Q ss_conf             11789999999668951001367641000127999999999999669889981343320405875899998678489705
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSR  267 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad  267 (549)
                                 ..|          |.     ....-..+++.+++..+--.++..|++|+.++++|+||+|.+|.++.|+
T Consensus        62 -----------skG----------pa-----V~a~RaQ~k~~Le~~~nL~i~q~~V~dli~e~~~V~GV~t~~G~~~~Ak  115 (232)
T 2cul_A           62 -----------PKD----------ER-----VWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGE  115 (232)
T ss_dssp             -----------TTC----------CC-----HHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECS
T ss_pred             -----------CCC----------HH-----HHHHHHHHHHHHHHCCCCHHHHCCCCCEEECCCCEEEEEECCCEEEEEE
T ss_conf             -----------563----------66-----6619999999976236835221551224751650369995233099986


Q ss_pred             EEEEECCC---------------------CHHHHHHHHHHCCCCCCCCCCCCCCC--CCCCHHHHHHHHCCCCCC
Q ss_conf             68993188---------------------76799999996697111487456864--303545540876365446
Q T0604           268 HVVLAVGH---------------------SARDTFEMLHERGVYMEAKPFSVGFR--IEHKQSMIDEARFGPNAG  319 (549)
Q Consensus       268 ~VVlAtGh---------------------sard~~~~l~~~Gi~~~~k~~a~G~r--ie~~~~~id~~q~g~~~~  319 (549)
                      +||||||.                     ++-...+.|+++|+.+.  ++.+|.+  +..+...||...+..+.+
T Consensus       116 aVILTTGTFL~G~ihiG~~~~~~GR~ge~~s~~Ls~~L~~lg~~~~--RlKTGTPa~PRl~~~sid~~~~~~q~g  188 (232)
T 2cul_A          116 KVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFV--EREGEVPETPSTPGYRVRYLAFHPEEW  188 (232)
T ss_dssp             EEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEE--EEEEEEC-----CCEEEEEEEECGGGE
T ss_pred             EEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCC--EECCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf             9998046555433886334503666777317899999997699844--025999999887687615445665668


No 22 
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.76  E-value=1.1e-16  Score=121.41  Aligned_cols=42  Identities=29%  Similarity=0.392  Sum_probs=38.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             766898798799999999996599089983588832110100
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      ..|||||||+|||.||+.|+++|++|+|||+.+.+|+|....
T Consensus         5 ~DVvIIGaGisGL~aA~~L~~~G~~V~VlEa~~rvGGR~~t~   46 (520)
T 1s3e_A            5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTL   46 (520)
T ss_dssp             CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEE
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf             888998978899999999987899889992699872655578


No 23 
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A*
Probab=99.73  E-value=8.8e-16  Score=115.71  Aligned_cols=43  Identities=30%  Similarity=0.465  Sum_probs=39.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCCCCCCC
Q ss_conf             7766898798799999999996599-089983588832110100
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEVRERTKDT  149 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~vg~r~~~~  149 (549)
                      .++|+|||||+|||.||+.|+++|+ +|+|||+.+.+|+|....
T Consensus         4 ~p~V~IIGaG~aGL~aA~~L~~~G~~~V~vlEa~~rvGGr~~t~   47 (472)
T 1b37_A            4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKT   47 (472)
T ss_dssp             -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEE
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEE
T ss_conf             99889989688999999999967999889993899873776689


No 24 
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.72  E-value=6.8e-15  Score=110.14  Aligned_cols=166  Identities=16%  Similarity=0.171  Sum_probs=94.1

Q ss_pred             CCCCCCCCCCEEEECCCHHHHHHHHHHHH------CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC-
Q ss_conf             77887767766898798799999999996------59908998358883211010001243542360234554135565-
Q T0604           100 AKAPENLTERPIVIGFGPCGLFAGLVLAQ------MGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAG-  172 (549)
Q Consensus       100 ~~~~~~~~~rVVVVGaGpAGL~AAl~La~------~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag-  172 (549)
                      ..-.+++.-.|||||||||||.||+.|++      .|++|+||||++.++.+......+.. ..++. ..+.+.+.++. 
T Consensus        28 ~~~r~~~e~DVvIVGaGPAGLaaA~~Laq~~~~~~~Gl~V~VlEK~~~~ga~i~sG~~l~p-~aL~e-L~pd~~~~~apl  105 (584)
T 2gmh_A           28 NMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDP-RAFEE-LFPDWKEKGAPL  105 (584)
T ss_dssp             CCCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECT-HHHHH-HCTTHHHHTCCC
T ss_pred             CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEECH-HHHHH-HHCCHHHCCCCC
T ss_conf             7655668599899894889999999998426023699969999578889866624327788-99998-713222238830


Q ss_pred             --CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC-CEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEC
Q ss_conf             --2124045532200021178999999966895100136764-1000127999999999999669889981343320405
Q T0604           173 --TFSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKP-HIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME  249 (549)
Q Consensus       173 --~fsdgkl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kp-h~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~  249 (549)
                        .....++........            ...+......... .........+.+.|.++++++|+++..+..+.++..+
T Consensus       106 ~~~V~~d~i~~l~~~~~------------~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~~a~~~G~~i~~g~~v~~~l~~  173 (584)
T 2gmh_A          106 NTPVTEDRFGILTEKYR------------IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFH  173 (584)
T ss_dssp             CEECCEEEEEEECSSCE------------EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEEC
T ss_pred             CCCEEEEEEEEECCCEE------------EECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCEEEEEECC
T ss_conf             26388738999779814------------840345434557875189875786289999998669889715156665404


Q ss_pred             CCE-EEEEEEC---------------CCCEEEECEEEEECCCCHHH
Q ss_conf             875-8999986---------------78489705689931887679
Q T0604           250 DGQ-ITGVTLS---------------NGEEIKSRHVVLAVGHSARD  279 (549)
Q Consensus       250 ~g~-v~gV~t~---------------~g~~i~ad~VVlAtGhsard  279 (549)
                      ++. +.++.+.               .+.++.++.||.|.|..+.-
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~vV~AdG~~s~l  219 (584)
T 2gmh_A          174 EDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHL  219 (584)
T ss_dssp             TTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHH
T ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHH
T ss_conf             7725888872134555444101455775488767899426764211


No 25 
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate- methylating enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B*
Probab=99.70  E-value=1.1e-15  Score=115.21  Aligned_cols=176  Identities=21%  Similarity=0.157  Sum_probs=104.8

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH-----------HCCCC-CC
Q ss_conf             76689879879999999999659--908998358883211010001243542360234554-----------13556-52
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQF-----------GEGGA-GT  173 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~-----------g~gga-g~  173 (549)
                      -.|||||||.+||++|+.|+++|  .+|+||||+....+.+....++.+............           .+.+. ..
T Consensus        22 yDvvIIGaGi~Gls~A~~La~~g~~~~V~liE~~~~~~GaS~~~~g~i~~~~~~~~~~~l~~~s~~~~~~~~~~~~~~~~  101 (405)
T 2gag_B           22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEYDFL  101 (405)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             CCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf             88999892799999999999679878699987999886512554522265889868899999999999999988576611


Q ss_pred             C-CCHHHHHHH-HHHCCCHHHHHHHHHHCCCCCCCCC------------------------CCCCCEECCHHHHHHHHHH
Q ss_conf             1-240455322-0002117899999996689510013------------------------6764100012799999999
Q T0604           174 F-SDGKLYSQV-KDPNFYGRKVITEFVEAGAPEEILY------------------------VSKPHIGTFKLVTMIEKMR  227 (549)
Q Consensus       174 f-sdgkl~t~~-~~~~~~~~~vl~~~~~~Ga~~~i~~------------------------~~kph~gtd~~~~vv~~L~  227 (549)
                      + ..+...... .................+.+.+.+.                        .-.+.-|......++..|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~idp~~~~~~l~  181 (405)
T 2gag_B          102 FSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDHVAWAFA  181 (405)
T ss_dssp             CBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHHHHHH
T ss_pred             EEECCEEEECCCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCEEECHHHHHHHHH
T ss_conf             43124043201013467899877778753875055479898764774433422244423426769986997999999999


Q ss_pred             HHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHHHHHHHH
Q ss_conf             999966988998134332040587589999867848970568993188767999999
Q T0604           228 ATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEML  284 (549)
Q Consensus       228 ~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsard~~~~l  284 (549)
                      +.+++.|++|+++++|++|+.+++++.+|.|.+|+ +.++.||+|+|..+++...++
T Consensus       182 ~~~~~~Gv~v~~~~~V~~i~~~~~~v~~v~t~~g~-~~~~~vV~a~g~~~~~l~~~~  237 (405)
T 2gag_B          182 RKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRGT-IHAGKVALAGAGHSSVLAEMA  237 (405)
T ss_dssp             HHHHHTTCEEECSCCEEEEEESSSBEEEEEETTCC-EEEEEEEECCGGGHHHHHHHH
T ss_pred             HHHHHCCCEEEECCEEEEEEEECCEEEEEEECCCC-EEEEEEEECCCCCHHHHHHHC
T ss_conf             99997799999477389999989989999948983-653039980672348899870


No 26 
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.69  E-value=1e-15  Score=115.28  Aligned_cols=172  Identities=20%  Similarity=0.246  Sum_probs=102.8

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC--CCCCCCCCHHH-------HHHH----HCCCCCCC
Q ss_conf             76689879879999999999659908998358883211010001--24354236023-------4554----13556521
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFG--FWRKRTLNPES-------NVQF----GEGGAGTF  174 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~--~~~~~~~~~~~-------n~~~----g~ggag~f  174 (549)
                      -.|+|||||.+||++|+.|+++|++|+||||+....+......+  .++....+...       ...+    .+.+...+
T Consensus         5 ~DviIIGaGi~GlstA~~La~~G~~V~vlE~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~~~~   84 (397)
T 2oln_A            5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERRLI   84 (397)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             88999995799999999999789958999489988764655657554002268578999999999999999998551100


Q ss_pred             CC-HHHHHH---HHHHCCCHHHHHHHHHHCCCCCCCCCC-------------------CCCCEECCHHHHHHHHHHHHHH
Q ss_conf             24-045532---200021178999999966895100136-------------------7641000127999999999999
Q T0604           175 SD-GKLYSQ---VKDPNFYGRKVITEFVEAGAPEEILYV-------------------SKPHIGTFKLVTMIEKMRATII  231 (549)
Q Consensus       175 sd-gkl~t~---~~~~~~~~~~vl~~~~~~Ga~~~i~~~-------------------~kph~gtd~~~~vv~~L~~~l~  231 (549)
                      .+ |.+...   ............+...+.|...+.+..                   -.|.-++.....++..|.+.++
T Consensus        85 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~p~~~~~~l~~~a~  164 (397)
T 2oln_A           85 HEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTLAQ  164 (397)
T ss_dssp             ECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCCCCCCHHCCC
T ss_conf             23331664041023119999999998875276501045777532001234765411563698658735213331001001


Q ss_pred             HCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHHHHH
Q ss_conf             66988998134332040587589999867848970568993188767999
Q T0604           232 ELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTF  281 (549)
Q Consensus       232 ~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsard~~  281 (549)
                      +.|+++++++.|++|..+++.+. |.|++| ++.|+.||+|+|..+....
T Consensus       165 ~~g~~i~~~~~V~~i~~~~~~~~-V~t~~g-~~~a~~vV~aaG~~s~~l~  212 (397)
T 2oln_A          165 AAGATLRAGETVTELVPDADGVS-VTTDRG-TYRAGKVVLACGPYTNDLL  212 (397)
T ss_dssp             HTTCEEEESCCEEEEEEETTEEE-EEESSC-EEEEEEEEECCGGGHHHHH
T ss_pred             CCCCCCCCEEEEEEEEECCCCEE-EECCCC-EEECCCEEEECCCCHHHHH
T ss_conf             47853231035642232178417-973896-7725868998882688899


No 27 
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.68  E-value=9.6e-16  Score=115.49  Aligned_cols=177  Identities=20%  Similarity=0.205  Sum_probs=109.8

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCC--CCCCCCCCCCCCCCCCCH-------HHHH---HHHCCCCCC
Q ss_conf             7766898798799999999996599-08998358883--211010001243542360-------2345---541355652
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEV--RERTKDTFGFWRKRTLNP-------ESNV---QFGEGGAGT  173 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~v--g~r~~~~~~~~~~~~~~~-------~~n~---~~g~ggag~  173 (549)
                      ..+|||||||..|+.+||.|+++|. +|+||||+...  .+.+....++.+....+.       .+..   .+.+.+...
T Consensus         4 ~~dVvIIGgGi~G~StAy~Lak~G~~dV~llEr~~~~~~sGsS~~~aG~i~~~~~~~~~~~la~~s~~~~~~l~e~~~~~   83 (830)
T 1pj5_A            4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVSC   83 (830)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEETTEES
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999999349999999999967998299996888898852110113662679999999999999999999998764898


Q ss_pred             C-CCHHHHHHH-HHHCCCHHHHHHHHHHCCCCCCCCCCC-------------------CCCEECCHHHHHHHHHHHHHHH
Q ss_conf             1-240455322-000211789999999668951001367-------------------6410001279999999999996
Q T0604           174 F-SDGKLYSQV-KDPNFYGRKVITEFVEAGAPEEILYVS-------------------KPHIGTFKLVTMIEKMRATIIE  232 (549)
Q Consensus       174 f-sdgkl~t~~-~~~~~~~~~vl~~~~~~Ga~~~i~~~~-------------------kph~gtd~~~~vv~~L~~~l~~  232 (549)
                      | ..|.|.... .+.....+...+....+|.+.+++...                   .|.-|+.....++..|.+.+++
T Consensus        84 ~~~~G~L~la~t~~~~~~l~~~~~~~~~~G~~~e~ls~~ei~~~~P~l~~~~i~gal~~p~dG~vdp~~~~~al~~~a~~  163 (830)
T 1pj5_A           84 FNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTES  163 (830)
T ss_dssp             EECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHHH
T ss_pred             EEECCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCEEEEEEECCCEEECHHHHHHHHHHHHHH
T ss_conf             89648899974999999999999999985998399899999985777786762799991897899799999999999986


Q ss_pred             CCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHHHHHHHH
Q ss_conf             6988998134332040587589999867848970568993188767999999
Q T0604           233 LGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEML  284 (549)
Q Consensus       233 ~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsard~~~~l  284 (549)
                      .|+++++++.|++|..+++++.+|.+.++ ++.|+.||+|+|..++....++
T Consensus       164 ~Gv~i~~~t~V~~i~~~~~~~~~v~t~~g-~i~a~~vV~aaG~~a~~l~~~~  214 (830)
T 1pj5_A          164 AGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMI  214 (830)
T ss_dssp             TTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTT
T ss_pred             CCCEEEEEEEEEEEEEECCEEEEEEECCC-CEEEEEEEECCCHHHHHHHHHC
T ss_conf             79949998613549995993478874455-1331024422321367777642


No 28 
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.66  E-value=4.2e-14  Score=105.18  Aligned_cols=44  Identities=20%  Similarity=0.291  Sum_probs=39.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHC------CCEEEEEECCCCCCCCCCCC
Q ss_conf             677668987987999999999965------99089983588832110100
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQM------GFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~------G~~V~VlErg~~vg~r~~~~  149 (549)
                      .++||||||||+|||.||+.|+++      |++|+|||+.+.+|+|....
T Consensus         4 ~~k~V~IIGaGiaGL~aA~~L~~~~~~~~~G~~V~vlEa~~~~GGr~~t~   53 (470)
T 3i6d_A            4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTV   53 (470)
T ss_dssp             -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEE
T ss_conf             99739998987899999999986474447998489997899880746899


No 29 
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.65  E-value=9.1e-16  Score=115.64  Aligned_cols=172  Identities=18%  Similarity=0.186  Sum_probs=100.6

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC-CCCCCHHHHH
Q ss_conf             877677668987987999999999965990899835888321101000124354236023455413556-5212404553
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGA-GTFSDGKLYS  181 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~gga-g~fsdgkl~t  181 (549)
                      ...|+-.|+|||||||||++|+.|+++|++|+||||.+.+....+       ...+++.+...+...|. ..+...... 
T Consensus        45 ~~~~tTDVlIVGaGpaGL~~A~~Lar~Gi~V~ViEr~~~~~~~~r-------a~~l~~~sleiL~~lGl~d~i~~~~~~-  116 (570)
T 3fmw_A           45 DAALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDR-------AGALHIRTVETLDLRGLLDRFLEGTQV-  116 (570)
T ss_dssp             ------CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSS-------CCCBCHHHHHHHHTTTCHHHHTTSCCB-
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-------EEEECHHHHHHHHHCCCHHHHHHCCCC-
T ss_conf             888987889999199999999999978999999918999888983-------899898999999987997999832712-


Q ss_pred             HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEE-ECC
Q ss_conf             2200021178999999966895100136764100012799999999999966988998134332040587589999-867
Q T0604           182 QVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVT-LSN  260 (549)
Q Consensus       182 ~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~-t~~  260 (549)
                       .....+..      ....+..........|+........+.+.|++.+.+.|++|+++++|+++..+++.+.... ..+
T Consensus       117 -~~~~~~~~------~~~~~~~~~~~~~~~p~~~~i~q~~le~~L~~~a~~~gv~v~~g~~v~~v~~~~d~v~v~~~~~~  189 (570)
T 3fmw_A          117 -AKGLPFAG------IFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPS  189 (570)
T ss_dssp             -CSBCCBTT------BCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETT
T ss_pred             -CCEEEEEC------CCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf             -32258833------65563104644467880689659999999999998679979974201232223345321112367


Q ss_pred             -CCEEEECEEEEECCCCHHHHHHHHHHCCCCCCC
Q ss_conf             -848970568993188767999999966971114
Q T0604           261 -GEEIKSRHVVLAVGHSARDTFEMLHERGVYMEA  293 (549)
Q Consensus       261 -g~~i~ad~VVlAtGhsard~~~~l~~~Gi~~~~  293 (549)
                       ++++.++.||.|+|..+.  .  -+.+|+.+..
T Consensus       190 g~~~~~adlvVgADG~~S~--V--R~~lg~~~~~  219 (570)
T 3fmw_A          190 GPYPVRARYGVGCDGGRST--V--RRLAADRFPG  219 (570)
T ss_dssp             EEEEEEESEEEECSCSSCH--H--HHHTTCCCCC
T ss_pred             CCCCEEEEEEEECCCCCCC--C--CCCCCCCCCC
T ss_conf             7632011089950686542--1--1124655542


No 30 
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidoreductase; HET: FAD; 1.80A {Streptomyces SP}
Probab=99.64  E-value=2.3e-15  Score=113.11  Aligned_cols=163  Identities=18%  Similarity=0.237  Sum_probs=95.0

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC-CCCCCHHHHHHHH
Q ss_conf             677668987987999999999965990899835888321101000124354236023455413556-5212404553220
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGA-GTFSDGKLYSQVK  184 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~gga-g~fsdgkl~t~~~  184 (549)
                      ..-.|+||||||+||++|+.|+++|++|+||||.+.+....+       ...+++.+...+...|. ..+....  ....
T Consensus        10 ~d~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~r-------a~~l~~~tle~L~~lGl~~~~~~~~--~~~~   80 (500)
T 2qa1_A           10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESR-------GLGFTARTMEVFDQRGILPRFGEVE--TSTQ   80 (500)
T ss_dssp             SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCC-------SEEECHHHHHHHHTTTCGGGGCSCC--BCCE
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCE-------EEEECHHHHHHHHHCCCHHHHHHHC--CCCC
T ss_conf             899989999098999999999878999999858999888982-------9998989999999879978986432--4543


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEE--CCC-
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998--678-
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL--SNG-  261 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t--~~g-  261 (549)
                        ....        .............++........+...|++.+.+.|++|+++++|+++..+++.++ +.+  .++ 
T Consensus        81 --~~~~--------~~~~~~~~~~~~~~~~~~~~q~~le~~L~~~a~~~g~~v~~g~~v~~i~~~~~~v~-v~~~~~~g~  149 (500)
T 2qa1_A           81 --GHFG--------GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVT-VEVRGPEGK  149 (500)
T ss_dssp             --EEET--------TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEE-EEEEETTEE
T ss_pred             --CEEC--------CEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCEEE-EEEECCCCC
T ss_conf             --1343--------50245444566666312136999999999977655947843608987531444047-888669997


Q ss_pred             CEEEECEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             4897056899318876799999996697111
Q T0604           262 EEIKSRHVVLAVGHSARDTFEMLHERGVYME  292 (549)
Q Consensus       262 ~~i~ad~VVlAtGhsard~~~~l~~~Gi~~~  292 (549)
                      +++.+|.||.|+|..+.    .-+.+|+.++
T Consensus       150 ~~i~a~~vVgADG~~S~----VR~~lg~~~~  176 (500)
T 2qa1_A          150 HTLRAAYLVGCDGGRSS----VRKAAGFDFP  176 (500)
T ss_dssp             EEEEESEEEECCCTTCH----HHHHTTCCCC
T ss_pred             EEEEEEEEEECCCCCCC----CHHHCCCCCC
T ss_conf             89998899714777542----0233077666


No 31 
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii OT3}
Probab=99.64  E-value=1.1e-14  Score=108.94  Aligned_cols=175  Identities=21%  Similarity=0.145  Sum_probs=101.0

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH-------HHH----CCCCCCCCC
Q ss_conf             766898798799999999996599089983588832110100012435423602345-------541----355652124
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNV-------QFG----EGGAGTFSD  176 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~-------~~g----~ggag~fsd  176 (549)
                      .+|+|||||.+||.+|+.|+++|++|+|||++....+.+....++......+.....       ...    +.....-..
T Consensus         6 ~DV~IIGaGiaGls~A~~L~~~G~~V~llE~~~~~~gaS~~~~~~i~~~~~~~~~~~l~~~s~~~~~~l~~~~~~~~~~~   85 (382)
T 1y56_B            6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFKQT   85 (382)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEECC
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             99999991099999999999889939998699998763256476351458977999999999999999998719763347


Q ss_pred             HHHHHHHH-HHCCCHHHHHHHHHHCCCCCCCCCC-------------------CCCCEECCHHHHHHHHHHHHHHHCCCE
Q ss_conf             04553220-0021178999999966895100136-------------------764100012799999999999966988
Q T0604           177 GKLYSQVK-DPNFYGRKVITEFVEAGAPEEILYV-------------------SKPHIGTFKLVTMIEKMRATIIELGGE  236 (549)
Q Consensus       177 gkl~t~~~-~~~~~~~~vl~~~~~~Ga~~~i~~~-------------------~kph~gtd~~~~vv~~L~~~l~~~G~~  236 (549)
                      +.+..... ..........+...+.+........                   -.+.-++.....++..+.+.+.+.|++
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~l~~~~~~~g~~  165 (382)
T 1y56_B           86 GYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEYGAK  165 (382)
T ss_dssp             CEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHHHTTCE
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCE
T ss_conf             85322233222221155689998629851113678898748743233442354278754569778523245678736958


Q ss_pred             EEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHHHHHHH
Q ss_conf             99813433204058758999986784897056899318876799999
Q T0604           237 IRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEM  283 (549)
Q Consensus       237 i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsard~~~~  283 (549)
                      +++++.|+++..+++++.+|.+.++ ++.++.+|+|+|..+.....+
T Consensus       166 ~~~~~~V~~l~~~~~~~~~v~~~~~-~i~a~~~v~~~g~~~~~~~~~  211 (382)
T 1y56_B          166 LLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAM  211 (382)
T ss_dssp             EECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHH
T ss_pred             EEECCEEEEEEEECCEEEEEEECCE-EEEECCEEEECCCCCCCCCCC
T ss_conf             9946568899995994899994766-898222144223344322222


No 32 
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-fuoric acid, oxidoreductase; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.64  E-value=5.8e-15  Score=110.59  Aligned_cols=171  Identities=19%  Similarity=0.254  Sum_probs=105.3

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCC--CCCCCCCCCCCC--------CHHHHHHH----HCCCCCCC
Q ss_conf             66898798799999999996599089983588832110--100012435423--------60234554----13556521
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT--KDTFGFWRKRTL--------NPESNVQF----GEGGAGTF  174 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~--~~~~~~~~~~~~--------~~~~n~~~----g~ggag~f  174 (549)
                      .|+|||||.+|+++|+.|+++|++|+|||+++..+...  ....+++.....        ...+...+    .+.+...+
T Consensus         5 Dv~IIGaGi~G~s~A~~La~~G~~V~vie~~~~~~~~~as~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~~~~   84 (389)
T 2gf3_A            5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHKIF   84 (389)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSCCE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf             98999924999999999997899589995589997557466666666155798689999999999999999998398724


Q ss_pred             -CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC-------------------CCCEECCHHHHHHHHHHHHHHHCC
Q ss_conf             -240455322000211789999999668951001367-------------------641000127999999999999669
Q T0604           175 -SDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVS-------------------KPHIGTFKLVTMIEKMRATIIELG  234 (549)
Q Consensus       175 -sdgkl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~-------------------kph~gtd~~~~vv~~L~~~l~~~G  234 (549)
                       ..|.+...............+.....|.+.+.+...                   .|.-++.....++..|.+.+++.|
T Consensus        85 ~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~G  164 (389)
T 2gf3_A           85 TKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEARG  164 (389)
T ss_dssp             ECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHHHTT
T ss_pred             ECCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHCC
T ss_conf             14527999721008999999999997298648731777631377656764314784155421303010344444464179


Q ss_pred             CEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHHHHH
Q ss_conf             88998134332040587589999867848970568993188767999
Q T0604           235 GEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTF  281 (549)
Q Consensus       235 ~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsard~~  281 (549)
                      +++.++++|+++..+++.. .|.+.++ ++.++.||+|+|..+....
T Consensus       165 ~~~~~~~~V~~~~~~~~~~-~v~~~~g-~i~a~~vV~aaG~~~~~l~  209 (389)
T 2gf3_A          165 AKVLTHTRVEDFDISPDSV-KIETANG-SYTADKLIVSMGAWNSKLL  209 (389)
T ss_dssp             CEEECSCCEEEEEECSSCE-EEEETTE-EEEEEEEEECCGGGHHHHG
T ss_pred             CCCCCCEEEEEEEECCCEE-EEEECCE-EEEECCEEEECCCCHHHHH
T ss_conf             6211230467763012203-6763130-7971416897373278888


No 33 
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidoreductase; HET: FAD; 2.70A {Streptomyces}
Probab=99.62  E-value=4.3e-15  Score=111.41  Aligned_cols=153  Identities=18%  Similarity=0.213  Sum_probs=90.0

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-CCCCCCHHHHHHH
Q ss_conf             767766898798799999999996599089983588832110100012435423602345541355-6521240455322
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGG-AGTFSDGKLYSQV  183 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~gg-ag~fsdgkl~t~~  183 (549)
                      .....|+||||||+||++|+.|+++|++|+||||.+.+....+.       ..+++.+...+...| ...+..  .....
T Consensus        10 r~D~dVlIVGaGpaGl~~A~~La~~Gi~v~viEr~~~~~~~~ra-------~~l~~~tle~l~~lGl~~~~~~--~~~~~   80 (499)
T 2qa2_A           10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRG-------LGFTARTMEVFDQRGILPAFGP--VETST   80 (499)
T ss_dssp             -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCS-------EEECHHHHHHHHHTTCGGGGCS--CCEES
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEE-------EEECHHHHHHHHHCCCHHHHHH--HCCCC
T ss_conf             28999999991989999999999789999999189998889839-------9989899999998799567422--13020


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEE-EEECCC-
Q ss_conf             000211789999999668951001367641000127999999999999669889981343320405875899-998678-
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITG-VTLSNG-  261 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~g-V~t~~g-  261 (549)
                      . ..+..         ............+.........+...|++.+.+.|++++++++|+++..+++.++. +...+| 
T Consensus        81 ~-~~~~~---------~~~~~~~~~~~~~~~~~~~q~~le~~L~~~~~~~gv~v~~g~~v~~v~~~~~~v~v~~~~~~g~  150 (499)
T 2qa2_A           81 Q-GHFGG---------RPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGP  150 (499)
T ss_dssp             E-EEETT---------EEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCE
T ss_pred             E-EEECC---------EEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEEECCCCC
T ss_conf             2-57655---------1601234566778646526999999999999856938835828997640221268888769988


Q ss_pred             CEEEECEEEEECCCC
Q ss_conf             489705689931887
Q T0604           262 EEIKSRHVVLAVGHS  276 (549)
Q Consensus       262 ~~i~ad~VVlAtGhs  276 (549)
                      +++.++.||.|+|..
T Consensus       151 ~~i~a~~vVgADG~~  165 (499)
T 2qa2_A          151 RSLTTRYVVGCDGGR  165 (499)
T ss_dssp             EEEEEEEEEECCCTT
T ss_pred             EEEEEEEEEECCCCC
T ss_conf             899998998428987


No 34 
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.61  E-value=3.8e-15  Score=111.71  Aligned_cols=159  Identities=21%  Similarity=0.207  Sum_probs=86.9

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC--------CCC
Q ss_conf             877677668987987999999999965990899835888321101000124354236023455413556--------521
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGA--------GTF  174 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~gga--------g~f  174 (549)
                      ......+|+|||||||||+||+.|++.|++|+||||...+..+..        ..+.+.+...+...|.        ..+
T Consensus        19 ~~m~rtdVvIVGgGpAGl~aA~~LAr~G~~VtLiEr~~~pr~~vG--------eal~P~~~~~L~~LGl~e~l~a~~~~~   90 (591)
T 3i3l_A           19 SHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVG--------ESLLPGTMSILNRLGLQEKIDAQNYVK   90 (591)
T ss_dssp             -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCC--------CBCCHHHHHHHHHTTCHHHHHHHCCEE
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCE--------EEECHHHHHHHHHCCCHHHHHHCCCCC
T ss_conf             999869989989599999999999968998999918999865605--------255889999999869947887458710


Q ss_pred             CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECC-CEE
Q ss_conf             2404553220002117899999996689510013676410001279999999999996698899813433204058-758
Q T0604           175 SDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQI  253 (549)
Q Consensus       175 sdgkl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~-g~v  253 (549)
                      ..+.......+...       +...++.+....+ ...+........+.+.|++.+++.|++++++++|+++..++ +.+
T Consensus        91 ~~g~~f~~g~~~~~-------~~~~~~~~~~~~~-~~~~~~~i~R~~l~~~L~~~A~~~Gv~v~~g~~V~~V~~~d~~~~  162 (591)
T 3i3l_A           91 KPSATFLWGQDQAP-------WTFSFAAPKVAPW-VFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRV  162 (591)
T ss_dssp             ECEEEEECSSSCCC-------EEEECCCC--CTT-CCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCE
T ss_pred             CCCEEEEECCCCCE-------EEEECCCCCCCCC-CCCCEEEECHHHHHHHHHHHHHHCCCEEEECCEEEEEEEEECCEE
T ss_conf             04169994787631-------5750456655566-667346874999999999999867999996858888875201024


Q ss_pred             EEEEECCCC--EEEECEEEEECCCCH
Q ss_conf             999986784--897056899318876
Q T0604           254 TGVTLSNGE--EIKSRHVVLAVGHSA  277 (549)
Q Consensus       254 ~gV~t~~g~--~i~ad~VVlAtGhsa  277 (549)
                      ..+...+|+  +++||.||.|+|..+
T Consensus       163 ~~~~~~~g~~~~i~AdlvVdAdG~~S  188 (591)
T 3i3l_A          163 VLTVRRGGESVTVESDFVIDAGGSGG  188 (591)
T ss_dssp             EEEEEETTEEEEEEESEEEECCGGGC
T ss_pred             EEEEECCCCCCCCCCCEEECCCCCCC
T ss_conf             44320267642234654663789876


No 35 
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.61  E-value=1.1e-14  Score=108.79  Aligned_cols=140  Identities=22%  Similarity=0.215  Sum_probs=86.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023-45541355652124045532200
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPES-NVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~-n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      .-.|||||||||||+||+.|+++|++|+||||...+..+.+.        .+.+.+ ...+...+               
T Consensus         7 ~yDVvIVGaGpaGl~~A~~Lar~G~~V~VlEr~~~Pr~~~G~--------~l~~~~~~~ll~~lG---------------   63 (512)
T 3e1t_A            7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGE--------SLLPATVHGICAMLG---------------   63 (512)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCC--------BCCHHHHTTHHHHTT---------------
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC--------EECCHHHHHHHHHCC---------------
T ss_conf             289999995799999999999779958999489997446666--------305889999999879---------------


Q ss_pred             HCCCHHHHHHHHHHCCCCC---------------CCC-----CCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf             0211789999999668951---------------001-----36764100012799999999999966988998134332
Q T0604           186 PNFYGRKVITEFVEAGAPE---------------EIL-----YVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDD  245 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~---------------~i~-----~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~  245 (549)
                             +.+.+...+.+.               ...     .....+........+.+.|++.+.+.|++++++++|++
T Consensus        64 -------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~l~~~L~~~a~~~Gv~v~~~~~v~~  136 (512)
T 3e1t_A           64 -------LTDEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVID  136 (512)
T ss_dssp             -------CHHHHHTTTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEE
T ss_pred             -------CHHHHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEECCEEEE
T ss_conf             -------8699986399721306999378873242143225577777378978999999999988756948982532334


Q ss_pred             CEECCCEEEEEEEC--CCC--EEEECEEEEECCCC
Q ss_conf             04058758999986--784--89705689931887
Q T0604           246 LHMEDGQITGVTLS--NGE--EIKSRHVVLAVGHS  276 (549)
Q Consensus       246 i~~~~g~v~gV~t~--~g~--~i~ad~VVlAtGhs  276 (549)
                      +..+++++.++.+.  +|.  ++.++.||.|+|..
T Consensus       137 v~~~~~~~~~~~~~~~~G~~~~i~a~~vV~AdG~~  171 (512)
T 3e1t_A          137 VLFEGERAVGVRYRNTEGVELMAHARFIVDASGNR  171 (512)
T ss_dssp             EEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTT
T ss_pred             EEEECCCCCCEEEEECCCCEEEEEEEEEEECCCHH
T ss_conf             66420111103443036752799856886124014


No 36 
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.60  E-value=5.1e-15  Score=110.95  Aligned_cols=171  Identities=16%  Similarity=0.204  Sum_probs=99.4

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC--CCCCCCCCC--------HHHHHHHH-----CCC
Q ss_conf             677668987987999999999965990899835888321101000--124354236--------02345541-----355
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTF--GFWRKRTLN--------PESNVQFG-----EGG  170 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~--~~~~~~~~~--------~~~n~~~g-----~gg  170 (549)
                      |+-.|||||||.+|+++|+.|+++|++|+|||+............  ...+....+        ..+...+.     .+.
T Consensus         1 ~~yDvvIIG~Gi~G~s~A~~La~~G~~V~lie~~~~~~~~gss~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~l~~~~~~   80 (372)
T 2uzz_A            1 MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNED   80 (372)
T ss_dssp             -CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSS
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             97789999956999999999997899599991899985001367776722102477468999999999999999997488


Q ss_pred             CCCCC-CHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC-------------------CCCCCCEECCHHHHHHHHHHHHH
Q ss_conf             65212-40455322000211789999999668951001-------------------36764100012799999999999
Q T0604           171 AGTFS-DGKLYSQVKDPNFYGRKVITEFVEAGAPEEIL-------------------YVSKPHIGTFKLVTMIEKMRATI  230 (549)
Q Consensus       171 ag~fs-dgkl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~-------------------~~~kph~gtd~~~~vv~~L~~~l  230 (549)
                      ...|. .+.+.....+. .......+....++.+.+..                   ....|+.+......++..+.+.+
T Consensus        81 ~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~g~v~p~~~~~~l~~~~  159 (372)
T 2uzz_A           81 DPIFVRSGVINLGPADS-TFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLA  159 (372)
T ss_dssp             SCSEECCCEEEEEETTC-HHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHH
T ss_pred             CCCEECCCEEEEEECHH-HHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCCCEEEEEECCCCEECHHHHHHHHHHHH
T ss_conf             83153057899971423-79999999999749970322256667655655566644799606631120677777899999


Q ss_pred             HHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHHH
Q ss_conf             9669889981343320405875899998678489705689931887679
Q T0604           231 IELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARD  279 (549)
Q Consensus       231 ~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsard  279 (549)
                      .+.|++++++++|+++..+++.+ .|.|.+| ++.+|.||+|+|..+..
T Consensus       160 ~~~G~~~~~~~~V~~i~~~~~~~-~v~t~~g-~i~a~~vV~a~G~~~~~  206 (372)
T 2uzz_A          160 KEAGCAQLFNCPVTAIRHDDDGV-TIETADG-EYQAKKAIVCAGTWVKD  206 (372)
T ss_dssp             HHTTCEEECSCCEEEEEECSSSE-EEEESSC-EEEEEEEEECCGGGGGG
T ss_pred             HHCCCCEEEEEEEEEEECCCCCC-CCCCCCC-CCCCCCEEEECCHHHHH
T ss_conf             97398414312566432046530-0012377-23036559924640777


No 37 
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.59  E-value=9.1e-14  Score=103.07  Aligned_cols=55  Identities=18%  Similarity=0.212  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHHCC-CEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECC
Q ss_conf             7999999999999669-8899813433204058758999986784897056899318
Q T0604           219 LVTMIEKMRATIIELG-GEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVG  274 (549)
Q Consensus       219 ~~~vv~~L~~~l~~~G-~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtG  274 (549)
                      ...+...|.+.+...+ ++++++++|+.|..++++++ |++.+|+++.||.||+|+.
T Consensus       254 ~~~l~~~l~~~l~~~~~~~i~~n~~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~A~p  309 (495)
T 2vvm_A          254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAAR-VTARDGREFVAKRVVCTIP  309 (495)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEE-EEETTCCEEEEEEEEECCC
T ss_pred             CHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEE-EEECCCCCCCCCCEEEECC
T ss_conf             3266677887765413742533764310123566135-8942784002463488258


No 38 
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.59  E-value=2.1e-14  Score=107.14  Aligned_cols=109  Identities=17%  Similarity=0.251  Sum_probs=71.8

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      ..|||||||||||+||+.|++.|++|+|+|+.  +++....           ..+-+        .+             
T Consensus        16 yDvvIIG~GpAGlsaA~~l~~~g~~v~lie~~--~GG~~~~-----------~~~i~--------~~-------------   61 (323)
T 3f8d_A           16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE-----------AGIVD--------DY-------------   61 (323)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG-----------CCEEC--------CS-------------
T ss_pred             EEEEEECCCHHHHHHHHHHHHCCCCEEEEEEC--CCCEEEE-----------CCCCC--------CC-------------
T ss_conf             46999898889999999999789989999806--8965774-----------27768--------82-------------


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEEC
Q ss_conf             11789999999668951001367641000127999999999999669889981343320405875899998678489705
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSR  267 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad  267 (549)
                                  .+            ........+.+.+.+.+...+++++.+ .+..+...+... .+....+..+.++
T Consensus        62 ------------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~-~~~~~~~~~~~~~  115 (323)
T 3f8d_A           62 ------------LG------------LIEIQASDMIKVFNKHIEKYEVPVLLD-IVEKIENRGDEF-VVKTKRKGEFKAD  115 (323)
T ss_dssp             ------------TT------------STTEEHHHHHHHHHHHHHTTTCCEEES-CEEEEEEC--CE-EEEESSSCEEEEE
T ss_pred             ------------CC------------CCCCCHHHHHHHHHHHHHHHCCCCCCC-EEEEEEECCCCE-EEEEEEEEEEEEE
T ss_conf             ------------77------------755656999999875323203432134-699985148724-8885212699986


Q ss_pred             EEEEECCCC
Q ss_conf             689931887
Q T0604           268 HVVLAVGHS  276 (549)
Q Consensus       268 ~VVlAtGhs  276 (549)
                      .+|+|+|.+
T Consensus       116 ~liiAtG~~  124 (323)
T 3f8d_A          116 SVILGIGVK  124 (323)
T ss_dssp             EEEECCCCE
T ss_pred             EEEECCCCC
T ss_conf             999856886


No 39 
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.58  E-value=2e-14  Score=107.23  Aligned_cols=55  Identities=24%  Similarity=0.406  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECC
Q ss_conf             79999999999996698899813433204058758999986784897056899318
Q T0604           219 LVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVG  274 (549)
Q Consensus       219 ~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtG  274 (549)
                      ...+.+.|.+.++..|++|+++++|++|..+++++++|.++ ++++.||.||....
T Consensus       233 ~~~l~~~l~~~~~~~G~~i~ln~~V~~I~~~~~~v~~v~~~-~~~~~ad~VV~~~~  287 (433)
T 1d5t_A          233 LGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSE-GEVARCKQLICDPS  287 (433)
T ss_dssp             TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEET-TEEEECSEEEECGG
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCEEEEEEEC-CEEEECCEEEECCC
T ss_conf             69999999999986197088338568999989999999939-97999098999901


No 40 
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus HB8} PDB: 2eq7_A*
Probab=99.57  E-value=2.3e-14  Score=106.81  Aligned_cols=79  Identities=23%  Similarity=0.217  Sum_probs=50.6

Q ss_pred             HHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECC
Q ss_conf             99996689510013676410001279999999999996698899813433204058758999986784897056899318
Q T0604           195 TEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVG  274 (549)
Q Consensus       195 ~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtG  274 (549)
                      ..|..+|........ .++......+.+.+.+.+.+++.|++++++++|+.+..+++.+ .|.+.+|+++++|.||+|+|
T Consensus       184 ~~l~~~G~~vt~i~~-~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~V~~i~~~~~~~-~v~~~~g~~i~aD~vi~A~G  261 (455)
T 2yqu_A          184 VVWHRLGAEVIVLEY-MDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGA-RVELEGGEVLEADRVLVAVG  261 (455)
T ss_dssp             HHHHHTTCEEEEECS-SSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEE-EEEETTSCEEEESEEEECSC
T ss_pred             HHHHHCCCEEEEEEE-CCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCEE-EEEECCCCEEEEEEEEEEEC
T ss_conf             888517977999993-3644554566676678888750766899503579999528869-99989997798416899317


Q ss_pred             C
Q ss_conf             8
Q T0604           275 H  275 (549)
Q Consensus       275 h  275 (549)
                      .
T Consensus       262 ~  262 (455)
T 2yqu_A          262 R  262 (455)
T ss_dssp             E
T ss_pred             C
T ss_conf             8


No 41 
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomic; HET: FAD; 2.15A {Agrobacterium tumefaciens str}
Probab=99.56  E-value=7.4e-14  Score=103.65  Aligned_cols=110  Identities=22%  Similarity=0.252  Sum_probs=79.5

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             67766898798799999999996599089983588832110100012435423602345541355652124045532200
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      |+-.|+|||||||||+||+.|++.|++|+|+|++...+.-....                      ..|           
T Consensus         1 MkyDVvIIG~GpAGlsaA~~lar~g~~v~lie~~~~~g~~~~~~----------------------~~~-----------   47 (297)
T 3fbs_A            1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS----------------------HGF-----------   47 (297)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC----------------------CSS-----------
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC----------------------CCC-----------
T ss_conf             98768999987999999999998899789990799887310115----------------------776-----------


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEE
Q ss_conf             02117899999996689510013676410001279999999999996698899813433204058758999986784897
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIK  265 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~  265 (549)
                                             ...+.   .....+...+++++.+++...+.+.+|+++..+++.+. |.+.+|+++.
T Consensus        48 -----------------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-v~~~~g~~~~  100 (297)
T 3fbs_A           48 -----------------------LGQDG---KAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFI-VEIDGGRRET  100 (297)
T ss_dssp             -----------------------TTCTT---CCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEE-EEETTSCEEE
T ss_pred             -----------------------CCCCC---CCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCEE-EEECCCCEEE
T ss_conf             -----------------------68688---89799999999999866978999028999993598289-9989997998


Q ss_pred             ECEEEEECCC
Q ss_conf             0568993188
Q T0604           266 SRHVVLAVGH  275 (549)
Q Consensus       266 ad~VVlAtGh  275 (549)
                      +++||+|||.
T Consensus       101 ~~~lviAtG~  110 (297)
T 3fbs_A          101 AGRLILAMGV  110 (297)
T ss_dssp             EEEEEECCCC
T ss_pred             ECEEEEECCC
T ss_conf             0689991022


No 42 
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, structural genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.56  E-value=6.8e-14  Score=103.86  Aligned_cols=138  Identities=17%  Similarity=0.204  Sum_probs=82.0

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      .+|+|||||||||.||+.|++.|++++++|+...+|+....   .+....+........... ...+           ..
T Consensus         5 ~dvvIIGaGpaGl~aA~~l~~~G~~~~~v~e~~~~GG~~~~---~p~~~~~~~~~~~~~~~~-~~~~-----------~~   69 (369)
T 3d1c_A            5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKH---WPKSTRTITPSFTSNGFG-MPDM-----------NA   69 (369)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHT---SCTTCBCSSCCCCCGGGT-CCCT-----------TC
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEE---CCCCCCCCCHHHHHCCCC-CCCC-----------CC
T ss_conf             99999886599999999998689970999916996753450---578530256154201114-5543-----------32


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEEC
Q ss_conf             11789999999668951001367641000127999999999999669889981343320405875899998678489705
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSR  267 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad  267 (549)
                      ..          ....+..... ..++   ....+.+.++..+.+.+++++++++|+.+..+++.++ |.+.++ ++.+|
T Consensus        70 ~~----------~~~~p~~~~~-~~~~---~~~~~~~y~~~~~~~~~l~i~~~~~V~~v~~~~~~~~-v~~~~~-~~~a~  133 (369)
T 3d1c_A           70 IS----------MDTSPAFTFN-EEHI---SGETYAEYLQVVANHYELNIFENTVVTNISADDAYYT-IATTTE-TYHAD  133 (369)
T ss_dssp             SS----------TTCCHHHHHC-CSSC---BHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEE-EEESSC-CEEEE
T ss_pred             CC----------CCCCCCCCCC-CCCC---CHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEE-EEECCC-EEEEC
T ss_conf             23----------3557677632-2357---9999999999989873962761613799971473799-993894-99978


Q ss_pred             EEEEECCCC
Q ss_conf             689931887
Q T0604           268 HVVLAVGHS  276 (549)
Q Consensus       268 ~VVlAtGhs  276 (549)
                      +||+|||+.
T Consensus       134 ~vviATG~~  142 (369)
T 3d1c_A          134 YIFVATGDY  142 (369)
T ss_dssp             EEEECCCST
T ss_pred             EEEECCCCC
T ss_conf             899912788


No 43 
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, plasmid, aromatic hydroxylase, nicotine degradation, flavin mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.55  E-value=7.2e-14  Score=103.70  Aligned_cols=150  Identities=17%  Similarity=0.165  Sum_probs=81.0

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             67766898798799999999996599089983588832110100012435423602345541355652124045532200
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      .+.||+|||||||||++|+.|+++|++|+||||.+..-...      +..-.+.+.....+...|.. . + .+......
T Consensus         4 ~~~~V~IiGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~------G~gi~l~~~~~~~L~~lGl~-~-~-~~~~~~~~   74 (397)
T 2vou_A            4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGF------GTGIVVQPELVHYLLEQGVE-L-D-SISVPSSS   74 (397)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCC------SCEEECCHHHHHHHHHTTCC-G-G-GTCBCCCE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC------CEEEEECHHHHHHHHHCCCC-H-H-HHCCCCCC
T ss_conf             99809998978899999999997899999997999987887------04898698999999976995-3-6-64377663


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEE
Q ss_conf             02117899999996689510013676410001279999999999996698899813433204058758999986784897
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIK  265 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~  265 (549)
                      ...     +++  ..|-............   ........+++.+  ....++++++|+++..+++.++ |++.||+++.
T Consensus        75 ~~~-----~~~--~~g~~~~~~~~~~~~~---~~~~l~~~l~~~l--~~~~i~~~~~v~~~~~~~~~v~-v~~~dG~~~~  141 (397)
T 2vou_A           75 MEY-----VDA--LTGERVGSVPADWRFT---SYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQ-MRFSDGTKAE  141 (397)
T ss_dssp             EEE-----EET--TTCCEEEEEECCCCEE---EHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEE-EEETTSCEEE
T ss_pred             EEE-----EEC--CCCCEECCCCCCCCCC---CHHHHHHHHHHCC--CCCEEEECCEEEEEEECCCEEE-EEECCCCEEE
T ss_conf             399-----975--7884751466422312---2899998887438--8609995889999994087799-9957998877


Q ss_pred             ECEEEEECCC-CH
Q ss_conf             0568993188-76
Q T0604           266 SRHVVLAVGH-SA  277 (549)
Q Consensus       266 ad~VVlAtGh-sa  277 (549)
                      +|.||.|+|. |.
T Consensus       142 adllVgADG~~S~  154 (397)
T 2vou_A          142 ANWVIGADGGASV  154 (397)
T ss_dssp             ESEEEECCCTTCH
T ss_pred             EEEEECCCCCCCH
T ss_conf             5277425776323


No 44 
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.55  E-value=5.1e-14  Score=104.67  Aligned_cols=45  Identities=38%  Similarity=0.611  Sum_probs=40.0

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCCCCCCC
Q ss_conf             767766898798799999999996599-089983588832110100
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEVRERTKDT  149 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~vg~r~~~~  149 (549)
                      ....+|+|||||+|||.||+.|+++|+ +|+|||+.+.+|+|....
T Consensus         4 ~~~~~V~IIGaG~aGLsaA~~L~~~G~~~V~vlE~~~~iGGr~~t~   49 (424)
T 2b9w_A            4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSP   49 (424)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCC
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEE
T ss_conf             9999899989848999999999856999889995799880775688


No 45 
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728}
Probab=99.55  E-value=2.1e-14  Score=107.03  Aligned_cols=155  Identities=17%  Similarity=0.242  Sum_probs=89.0

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      -.|+|||||||||+||+.|+++|++|+||||.+.++........      +.+.....++......+..    ..+....
T Consensus         5 yDViIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~g~~------l~~~~l~~l~~~~~~~~~~----~~~~~~~   74 (397)
T 3cgv_A            5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEG------LSKGILNEADIKADRSFIA----NEVKGAR   74 (397)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCE------EETHHHHHTTCCCCTTTEE----EEESEEE
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEECC------CCHHHHHHCCCCCHHHHHH----CCCEEEE
T ss_conf             88899994899999999999789968999179988987743364------5799998669973033553----5200599


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC-CC--EE
Q ss_conf             1178999999966895100136764100012799999999999966988998134332040587589999867-84--89
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN-GE--EI  264 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~-g~--~i  264 (549)
                      .....     ........................+...|++.+.+.|+++++.+++++...+++.+.++.+.. ++  ++
T Consensus        75 ~~~~~-----~~~~~~~~~~~~~~~~~~~i~r~~~~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (397)
T 3cgv_A           75 IYGPS-----EKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDV  149 (397)
T ss_dssp             EECTT-----CSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEE
T ss_pred             EEECC-----CCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCCCCCCCEECCCCCCEEE
T ss_conf             99689-----9667612444567863279889999999999998759831212013210111111122100023550699


Q ss_pred             EECEEEEECCCCH
Q ss_conf             7056899318876
Q T0604           265 KSRHVVLAVGHSA  277 (549)
Q Consensus       265 ~ad~VVlAtGhsa  277 (549)
                      .|+.||.|+|..+
T Consensus       150 ~~~~vv~AdG~~s  162 (397)
T 3cgv_A          150 RAKMVIAADGFES  162 (397)
T ss_dssp             EEEEEEECCCTTC
T ss_pred             EEEEEEECCCCCC
T ss_conf             8647996787762


No 46 
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3k7t_A*
Probab=99.55  E-value=4.1e-14  Score=105.29  Aligned_cols=50  Identities=20%  Similarity=0.315  Sum_probs=42.0

Q ss_pred             HHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCC
Q ss_conf             999999966988998134332040587589999867848970568993188
Q T0604           225 KMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       225 ~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGh  275 (549)
                      .|.+.+.+..++|+++++|+.|..+++.+. |++.+|+++.||.||+|+..
T Consensus       208 ~l~~~l~~~l~~i~~~~~V~~i~~~~~~v~-V~~~~g~~~~ad~VV~a~p~  257 (431)
T 3k7m_X          208 DLVDAMSQEIPEIRLQTVVTGIDQSGDVVN-VTVKDGHAFQAHSVIVATPM  257 (431)
T ss_dssp             HHHHHHHTTCSCEESSCCEEEEECSSSSEE-EEETTSCCEEEEEEEECSCG
T ss_pred             HHHHHHHHCCCCCCCCCCEEEEEECCCEEE-EEECCCCEEEEEEEEECCCH
T ss_conf             999998720331012761589998599389-99899979860169954798


No 47 
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrate binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A*
Probab=99.54  E-value=1.2e-13  Score=102.31  Aligned_cols=47  Identities=23%  Similarity=0.369  Sum_probs=41.5

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             87767766898798799999999996599089983588832110100
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      +...+++|+|||||+|||+||+.|+++|++|+|||+.+.+|+|.+..
T Consensus        29 ~~~~pk~VvVIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GGr~~T~   75 (498)
T 2iid_A           29 ATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTY   75 (498)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEE
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf             99999988998988899999999986899999995799881534478


No 48 
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA; HET: FAD; 2.10A {Thermus thermophilus HB8}
Probab=99.53  E-value=1.4e-13  Score=101.87  Aligned_cols=114  Identities=21%  Similarity=0.364  Sum_probs=85.3

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      .+|||||||||||+||+.|++.|++|+|+|+.+.+|+.....         .+ .+..+                  +. 
T Consensus         6 ~dVvVIGgG~AGl~aA~~La~~G~~V~lvEk~~~~GG~~~~~---------~~-~~~~~------------------~~-   56 (335)
T 2zbw_A            6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL---------YP-EKYIY------------------DV-   56 (335)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT---------CT-TSEEC------------------CS-
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEE---------EC-CCCCC------------------CC-
T ss_conf             759999987999999999997899889991578778778850---------04-62102------------------54-


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEEC
Q ss_conf             11789999999668951001367641000127999999999999669889981343320405875899998678489705
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSR  267 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad  267 (549)
                                           .+.|+   .....+++.+.+...+++..++++++|+.+..+++.+. |.+.+++.+.++
T Consensus        57 ---------------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-V~~~~g~~~~~~  111 (335)
T 2zbw_A           57 ---------------------AGFPK---VYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFK-VTTSQGNAYTAK  111 (335)
T ss_dssp             ---------------------TTCSS---EEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEE-EEETTSCEEEEE
T ss_pred             ---------------------CCCCC---CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCEEE-EEECCCCEEEEE
T ss_conf             ---------------------67887---78899999999999870938992255999994197699-997899599986


Q ss_pred             EEEEECCC
Q ss_conf             68993188
Q T0604           268 HVVLAVGH  275 (549)
Q Consensus       268 ~VVlAtGh  275 (549)
                      .+|+|+|.
T Consensus       112 ~~iiatg~  119 (335)
T 2zbw_A          112 AVIIAAGV  119 (335)
T ss_dssp             EEEECCTT
T ss_pred             EEEEEEEC
T ss_conf             78999953


No 49 
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.52  E-value=2.7e-14  Score=106.42  Aligned_cols=170  Identities=22%  Similarity=0.264  Sum_probs=89.1

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC--------------CC
Q ss_conf             7668987987999999999965990899835888321101000124354236023455413556--------------52
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGA--------------GT  173 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~gga--------------g~  173 (549)
                      -.|+||||||+||++|+.|+++|++|+||||.+.+....+.       ..+++.+...+...|.              +.
T Consensus         6 ~DVlIVGaGpaGl~~A~~L~~~Gi~v~v~Er~~~~~~~~ra-------~~l~~~t~~~L~~lGl~~~~~~~~~~~~~~~~   78 (535)
T 3ihg_A            6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRA-------AGQNPRTMELLRIGGVADEVVRADDIRGTQGD   78 (535)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCS-------CCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSC
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEE-------EEECHHHHHHHHHCCCHHHHHHHCCCCCCCCC
T ss_conf             79899991989999999999789999999489998889829-------99898999999987998999753365654440


Q ss_pred             CCC-HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCE
Q ss_conf             124-0455322000211789999999668951001367641000127999999999999669889981343320405875
Q T0604           174 FSD-GKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQ  252 (549)
Q Consensus       174 fsd-gkl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~  252 (549)
                      +.. ................ .......  ..  ... ..+........+.+.|++.+.+.|++++++++|+++..+++.
T Consensus        79 ~~~~~~~~~~g~~~~~~~~~-~~~~~~~--~~--~~~-~~~~~~i~q~~l~~~L~~~a~~~g~~v~~g~~v~~~~~~~~~  152 (535)
T 3ihg_A           79 FVIRLAESVRGEILRTVSES-FDDMVAA--TE--PCT-PAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDD  152 (535)
T ss_dssp             CEEEEESSSSSCEEEEEESC-HHHHHHT--TG--GGC-SCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGG
T ss_pred             EEECCCCCCCCCEEECCCCC-CCCCCCC--CC--CCC-CCCEEEECHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEE
T ss_conf             23202345466123114545-5542223--35--567-672578609999999999998679879834521358861000


Q ss_pred             E-EEE----EECCCC-EEEECEEEEECCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             8-999----986784-89705689931887679999999669711148
Q T0604           253 I-TGV----TLSNGE-EIKSRHVVLAVGHSARDTFEMLHERGVYMEAK  294 (549)
Q Consensus       253 v-~gV----~t~~g~-~i~ad~VVlAtGhsard~~~~l~~~Gi~~~~k  294 (549)
                      + .+|    ...+++ ++.++.||.|+|..+.  .  -+.+|+.+...
T Consensus       153 ~~~~v~~~~~~~~g~~~v~a~~vVgADG~~S~--V--R~~lg~~~~~~  196 (535)
T 3ihg_A          153 AGAGVTARLAGPDGEYDLRAGYLVGADGNRSL--V--RESLGIGRYGH  196 (535)
T ss_dssp             GCSEEEEEEEETTEEEEEEEEEEEECCCTTCH--H--HHHTTCCEEEE
T ss_pred             EEEEEEEEEECCCCEEEEEEEEEEECCCCCHH--H--HHHCCCCCCCC
T ss_conf             00135788835997299994589963765112--4--98719886777


No 50 
>3gmb_A 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase; flavin monooxygenase, oxidoreductase; HET: FAD; 2.10A {Mesorhizobium loti} PDB: 3gmc_A*
Probab=99.52  E-value=2.3e-13  Score=100.58  Aligned_cols=136  Identities=21%  Similarity=0.249  Sum_probs=83.0

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .++|+|||||||||.+|+.|+++|++|+||||.+.+......+       .+.+.....+...|.               
T Consensus        47 ~~~V~IIGaGpaGl~~A~~Lar~G~~V~vlEr~~~~~~~g~gi-------~l~p~~~~~L~~lGl---------------  104 (415)
T 3gmb_A           47 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGI-------YLWHNGLRVLEGLGA---------------  104 (415)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEE-------EEEHHHHHHHHHHTC---------------
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEE-------EECHHHHHHHHHCCC---------------
T ss_conf             9989998978899999999997899999990799988785399-------979899999998799---------------


Q ss_pred             CCCHHHHHHHHHHCCCC-------------CCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEE
Q ss_conf             21178999999966895-------------10013676410001279999999999996698899813433204058758
Q T0604           187 NFYGRKVITEFVEAGAP-------------EEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI  253 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~-------------~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v  253 (549)
                             .+.+.+.+..             ......+.|.. ......+.+.|++.+.+.|+.+.+++.+.+... ++. 
T Consensus       105 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~R~~l~~~L~~~~~~~g~~~~~~~~~~~~~~-~~~-  174 (415)
T 3gmb_A          105 -------LDDVLQGSHTPPTYETWMHNKSVSKETFNGLPWR-IMTRSHLHDALVNRARALGVDISVNSEAVAADP-VGR-  174 (415)
T ss_dssp             -------HHHHHTTCBCCSCEEEEETTEEEEEECGGGCCEE-EEEHHHHHHHHHHHHHHHTCEEESSCCEEEEET-TTE-
T ss_pred             -------HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEE-EEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCC-
T ss_conf             -------1899951788742699964875432135885056-653236666778776523874223643222223-321-


Q ss_pred             EEEEECCCCEEEECEEEEECCCC
Q ss_conf             99998678489705689931887
Q T0604           254 TGVTLSNGEEIKSRHVVLAVGHS  276 (549)
Q Consensus       254 ~gV~t~~g~~i~ad~VVlAtGhs  276 (549)
                        ++..+|.++.+|.||.|+|..
T Consensus       175 --v~~~~g~~~~a~~vI~ADG~~  195 (415)
T 3gmb_A          175 --LTLQTGEVLEADLIVGADGVG  195 (415)
T ss_dssp             --EEETTSCEEECSEEEECCCTT
T ss_pred             --CCCCCCCEEEEEEEEEECCCC
T ss_conf             --012356414689998623567


No 51 
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.51  E-value=7.3e-13  Score=97.41  Aligned_cols=43  Identities=26%  Similarity=0.482  Sum_probs=37.9

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCE-EEEEECCCCCCCC
Q ss_conf             877677668987987999999999965990-8998358883211
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFN-PIIVERGKEVRER  145 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~-V~VlErg~~vg~r  145 (549)
                      +....+||+|||||||||+||+.|+++|++ |+|||+.+.+|+-
T Consensus       183 ~~~~gkKVaIIGaGPAGLsAA~~Lar~G~~~VtV~Ek~~~~GGl  226 (1025)
T 1gte_A          183 PEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL  226 (1025)
T ss_dssp             CGGGGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTH
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCE
T ss_conf             55689969998921999999999984899749999469977746


No 52 
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, mechanism, structure, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.50  E-value=1.2e-13  Score=102.31  Aligned_cols=151  Identities=15%  Similarity=0.175  Sum_probs=80.1

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC-CC------CCHH
Q ss_conf             6776689879879999999999659908998358883211010001243542360234554135565-21------2404
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAG-TF------SDGK  178 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag-~f------sdgk  178 (549)
                      |+.+|+|||||||||++|+.|+++|++|+||||.+.......     .+...+++.+...+...|.. .+      .++.
T Consensus         1 M~t~V~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~-----~~~~~l~~~~~~~L~~lGl~~~~~~~~~~~~~~   75 (394)
T 1k0i_A            1 MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGR-----IRAGVLEQGMVDLLREAGVDRRMARDGLVHEGV   75 (394)
T ss_dssp             CBCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTC-----CCCCEECHHHHHHHHHTTCCHHHHHHCEEESCE
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-----CEEEEECHHHHHHHHHCCCHHHHHHHCCCCCCE
T ss_conf             999999999579999999999978999999946999876898-----579998989999999879928988507765417


Q ss_pred             HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCE-EEEECCCCCCEECCCEEEEEE
Q ss_conf             5532200021178999999966895100136764100012799999999999966988-998134332040587589999
Q T0604           179 LYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGE-IRFSTRVDDLHMEDGQITGVT  257 (549)
Q Consensus       179 l~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~-i~~~t~V~~i~~~~g~v~gV~  257 (549)
                      .. ..........  ..          ......++ .......+.+.|++.+.+.++. +++.+.++.+...++.+.-..
T Consensus        76 ~~-~~~~~~~~~~--~~----------~~~~~~~~-~~~~~~~~~~~L~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~  141 (394)
T 1k0i_A           76 EI-AFAGQRRRID--LK----------RLSGGKTV-TVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTF  141 (394)
T ss_dssp             EE-EETTEEEEEC--HH----------HHHTSCCE-EECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEE
T ss_pred             EE-EECCCCCEEC--CC----------CCCCCCCC-EEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEE
T ss_conf             99-9578750110--01----------24578862-14328899999999776427631122203555640352148999


Q ss_pred             ECCC--CEEEECEEEEECCC
Q ss_conf             8678--48970568993188
Q T0604           258 LSNG--EEIKSRHVVLAVGH  275 (549)
Q Consensus       258 t~~g--~~i~ad~VVlAtGh  275 (549)
                      ..+|  .++.||.||.|+|.
T Consensus       142 ~~~g~~~~~~adlvVgADG~  161 (394)
T 1k0i_A          142 ERDGERLRLDCDYIAGCDGF  161 (394)
T ss_dssp             EETTEEEEEECSEEEECCCT
T ss_pred             ECCCCEEEEEEEEEEECCCC
T ss_conf             35995699984389967998


No 53 
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.50  E-value=9.7e-13  Score=96.65  Aligned_cols=99  Identities=22%  Similarity=0.224  Sum_probs=67.8

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             87767766898798799999999996599089983588832110100012435423602345541355652124045532
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQ  182 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~  182 (549)
                      ..+..++|+|||||||||+||+.|+++|++|+|||+.+.+|+...                                   
T Consensus       118 ~~~~~kkVAIIGaGPAGL~aA~~la~~G~~Vtv~E~~~~~GG~l~-----------------------------------  162 (456)
T 2vdc_G          118 SRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV-----------------------------------  162 (456)
T ss_dssp             CSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH-----------------------------------
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEE-----------------------------------
T ss_conf             666798899989788999999999964986999950575786688-----------------------------------


Q ss_pred             HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCC-CEECCCEEEEEEECCC
Q ss_conf             200021178999999966895100136764100012799999999999966988998134332-0405875899998678
Q T0604           183 VKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDD-LHMEDGQITGVTLSNG  261 (549)
Q Consensus       183 ~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~-i~~~~g~v~gV~t~~g  261 (549)
                                       +|.|..-+           ...+++...+.+.++|+++++++.|.. +..++           
T Consensus       163 -----------------~gIp~~rl-----------~~~vi~~~i~~i~~~Gv~~~~n~~vg~d~~~~~-----------  203 (456)
T 2vdc_G          163 -----------------YGIPGFKL-----------EKSVVERRVKLLADAGVIYHPNFEVGRDASLPE-----------  203 (456)
T ss_dssp             -----------------HTSCTTTS-----------CHHHHHHHHHHHHHTTCEEETTCCBTTTBCHHH-----------
T ss_pred             -----------------ECCCCCCC-----------CHHHHHHHHHHHHHCCCEEECCCEEEEECCHHH-----------
T ss_conf             -----------------76788767-----------189999999999866939977767704340666-----------


Q ss_pred             CEEEECEEEEECCC
Q ss_conf             48970568993188
Q T0604           262 EEIKSRHVVLAVGH  275 (549)
Q Consensus       262 ~~i~ad~VVlAtGh  275 (549)
                      .....|+|++|+|.
T Consensus       204 l~~~~daV~la~Ga  217 (456)
T 2vdc_G          204 LRRKHVAVLVATGV  217 (456)
T ss_dssp             HHSSCSEEEECCCC
T ss_pred             HHHCCCEEEEEECC
T ss_conf             54047669995167


No 54 
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.49  E-value=7.5e-13  Score=97.32  Aligned_cols=174  Identities=16%  Similarity=0.082  Sum_probs=96.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCC-----C----HHHHH---HHHCCCCC---
Q ss_conf             766898798799999999996599089983588832110100012435423-----6----02345---54135565---
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTL-----N----PESNV---QFGEGGAG---  172 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~-----~----~~~n~---~~g~ggag---  172 (549)
                      -.|+|||||..|+.+|+.|+++|++|+||||++-..+-+....++...|.-     +    .++..   .... .++   
T Consensus        19 ~Dv~IIGgGi~G~s~A~~La~~G~~V~LlEk~d~~~gtS~~ss~liHgG~rYl~~~~~~lv~e~l~er~~l~~-~ap~l~   97 (561)
T 3da1_A           19 LDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYE-NAPHVT   97 (561)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHH-HCTTTC
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HCHHHC
T ss_conf             8789989679999999999968998899979967521446150466735421566999999999999999999-687760


Q ss_pred             --------CCCCHHHHHHHHHHCC------------------CHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHH
Q ss_conf             --------2124045532200021------------------17899999996689510013676410001279999999
Q T0604           173 --------TFSDGKLYSQVKDPNF------------------YGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKM  226 (549)
Q Consensus       173 --------~fsdgkl~t~~~~~~~------------------~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L  226 (549)
                              .+..+.+.........                  ....+.+. ...-.+........|..+......++..+
T Consensus        98 ~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~~~~~~~~~~~~dg~~d~~~l~~~l  176 (561)
T 3da1_A           98 TPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEK-EPLLRKENLKGGGIYVEYRTDDARLTLEI  176 (561)
T ss_dssp             EEEEEEEEECC---------------------------CEEECHHHHHHH-CTTSCCTTCCEEEEEEEEECCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH-CCCCCHHHEEEEEECCCCCCHHHHHHHHH
T ss_conf             45752898526863889999868999998613126886301478887430-87667213368997046411077788999


Q ss_pred             HHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC-----CCEEEECEEEEECCCCHHHHHHH
Q ss_conf             9999966988998134332040587589999867-----84897056899318876799999
Q T0604           227 RATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN-----GEEIKSRHVVLAVGHSARDTFEM  283 (549)
Q Consensus       227 ~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~-----g~~i~ad~VVlAtGhsard~~~~  283 (549)
                      ...+.+.|++++++++|+++..+++.+.++.+.+     ..++.|+.||.|+|-.+.+.-.|
T Consensus       177 ~~~a~~~Ga~i~~~t~V~~i~~~~~~~~~~~~~~~~~g~~~~i~a~~VVNAaG~wad~i~~~  238 (561)
T 3da1_A          177 MKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREK  238 (561)
T ss_dssp             HHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHT
T ss_pred             HHHHHHCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHEEECCCHHHHHHHHH
T ss_conf             99998589976655157532112553101110201346322311114123144124423331


No 55 
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structural genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.48  E-value=2.4e-13  Score=100.47  Aligned_cols=157  Identities=20%  Similarity=0.222  Sum_probs=84.7

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC------CCCCCCCCHH
Q ss_conf             776689879879999999999659--90899835888321101000124354236023455413------5565212404
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGE------GGAGTFSDGK  178 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~------ggag~fsdgk  178 (549)
                      -+||+|||||||||.||..|.+.+  .+|+||||.+.+|+--..... .......+..+.....      .+...+. ..
T Consensus         6 ~k~VaIIGaGpsGL~aa~~Ll~~~~~~~v~vfE~~~~vGG~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~   83 (447)
T 2gv8_A            6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTST-LSNKLPVPSTNPILTTEPIVGPAALPVYP-SP   83 (447)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSC-CCSCCCSSBCCTTCCCCCBCCSSSCCBCC-CC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
T ss_conf             99999989039999999999982999988999679997774014788-76456764445444556445655455566-76


Q ss_pred             HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEE
Q ss_conf             55322000211789999999668951001367641000127999999999999669889981343320405875899998
Q T0604           179 LYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL  258 (549)
Q Consensus       179 l~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t  258 (549)
                      ++....  ....++.+ .|..+-.+.+  +...|+     ...+.+.|+.+++.+.-.|+|+|+|+++..+++++. |++
T Consensus        84 ~Y~~L~--tN~pk~~m-~fsd~p~p~~--~~~fp~-----~~~v~~YL~~ya~~l~~~I~~nt~V~~v~~~~~~w~-v~~  152 (447)
T 2gv8_A           84 LYRDLQ--TNTPIELM-GYCDQSFKPQ--TLQFPH-----RHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWV-VTY  152 (447)
T ss_dssp             CCTTCB--CSSCHHHH-SCTTCCCCTT--CCSSCB-----HHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEE-EEE
T ss_pred             CCCCEE--ECCCHHHH-CCCCCCCCCC--CCCCCC-----HHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEE-EEE
T ss_conf             678715--78768874-4899888764--556899-----999999999999864236680039998770599168-999


Q ss_pred             CC---CC---EEEECEEEEECCCC
Q ss_conf             67---84---89705689931887
Q T0604           259 SN---GE---EIKSRHVVLAVGHS  276 (549)
Q Consensus       259 ~~---g~---~i~ad~VVlAtGhs  276 (549)
                      .+   +.   +..+|+||+|+||-
T Consensus       153 ~~~~~~~~~~~~~fd~VvvatG~~  176 (447)
T 2gv8_A          153 KGTKAGSPISKDIFDAVSICNGHY  176 (447)
T ss_dssp             EESSTTCCEEEEEESEEEECCCSS
T ss_pred             EEEECCCEEEEEEEEEEECCCCCC
T ss_conf             862014407999998630455356


No 56 
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.47  E-value=9.9e-14  Score=102.84  Aligned_cols=132  Identities=20%  Similarity=0.260  Sum_probs=81.6

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      .....+|+||||||+||.+|+.|++.|++|+|+||.+..+          +.+.+++.+...+...|.+.          
T Consensus        89 ~~~~~~~~~~g~g~~g~~~a~~~~~~~~~~~~~~~~~~~~----------ra~~l~~~sl~ild~~GL~~----------  148 (497)
T 2bry_A           89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS----------RHNVLHLWPFTIHDLRALGA----------  148 (497)
T ss_dssp             TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC----------CCCEEECCHHHHHHHHTTTH----------
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CEEEECHHHHHHHHHCCCCH----------
T ss_conf             7889908998978999999999997799889996789988----------63287828999999879922----------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCC---EEEEEEECC
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587---589999867
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDG---QITGVTLSN  260 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g---~v~gV~t~~  260 (549)
                              +.  ....++..      .-.|+.   ...+...|.+.+...|++|+++++|+++....+   .+. +++.+
T Consensus       149 --------~~--~~~~~~~~------~~~~i~---q~~le~~L~~~a~~~Gv~i~~g~~v~~l~~~~~~~~gv~-~~~~~  208 (497)
T 2bry_A          149 --------KK--FYGRFCTG------TLDHIS---IRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWR-AQLQP  208 (497)
T ss_dssp             --------HH--HCTTTTCT------TCCEEE---HHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBE-EEEES
T ss_pred             --------HH--HHCCCCCC------CCCCCC---HHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCCEE-EEEEE
T ss_conf             --------56--50757778------635489---999999999999867998982678999982267775249-99976


Q ss_pred             C-----CEEEECEEEEECCC
Q ss_conf             8-----48970568993188
Q T0604           261 G-----EEIKSRHVVLAVGH  275 (549)
Q Consensus       261 g-----~~i~ad~VVlAtGh  275 (549)
                      +     .+++++.||.|+|.
T Consensus       209 ~~~~~~~~~~a~~vvgaDG~  228 (497)
T 2bry_A          209 NPPAQLASYEFDVLISAAGG  228 (497)
T ss_dssp             CCCHHHHTCCBSEEEECCCT
T ss_pred             CCCCCEEEEEEEEECCCCCH
T ss_conf             79995489976552144744


No 57 
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.47  E-value=6.1e-13  Score=97.90  Aligned_cols=45  Identities=18%  Similarity=0.217  Sum_probs=40.0

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             767766898798799999999996599089983588832110100
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      ....+|+|||||+|||+||+.|+++|++|+|||+.+.+|+|....
T Consensus        14 ~~~~dV~IIGaGiaGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~   58 (478)
T 2ivd_A           14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTH   58 (478)
T ss_dssp             ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEE
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf             999988998987899999999985899999990799886877899


No 58 
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.47  E-value=1.7e-14  Score=107.59  Aligned_cols=176  Identities=19%  Similarity=0.281  Sum_probs=86.7

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC-CCCCC-HHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556-52124-04553
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGA-GTFSD-GKLYS  181 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~gga-g~fsd-gkl~t  181 (549)
                      .++...|+||||||+||++|+.|+++|++|+||||.+.+....+       ...+++.+...+...|. ..+.. +....
T Consensus        23 ~P~~~DVlIVGaGpaGL~lA~~La~~Gi~v~viEr~~~~~~~~r-------a~~l~~~tleiL~~lGl~~~l~~~~~~~~   95 (549)
T 2r0c_A           23 APIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPR-------VGTIGPRSMELFRRWGVAKQIRTAGWPGD   95 (549)
T ss_dssp             CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCC-------CCEECHHHHHHHHHTTCHHHHHTSSCCTT
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-------EEEECHHHHHHHHHCCCHHHHHHHCCCCC
T ss_conf             99858989999188999999999978999999918999888984-------89989899999998789899985258765


Q ss_pred             HHHHHCCC----HHHHHHHHHHCC-CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEE
Q ss_conf             22000211----789999999668-9510013676410001279999999999996698899813433204058758999
Q T0604           182 QVKDPNFY----GRKVITEFVEAG-APEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGV  256 (549)
Q Consensus       182 ~~~~~~~~----~~~vl~~~~~~G-a~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV  256 (549)
                      ........    ...+.. + ..+ ..........+..........+..+..  +..+++|+++++|+++..+++.++..
T Consensus        96 ~~~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~q~~l~~~l~--~~~g~~v~~g~~v~~~~~~~~~v~v~  171 (549)
T 2r0c_A           96 HPLDAAWVTRVGGHEVYR-I-PLGTADTRATPEHTPEPDAICPQHWLAPLLA--EAVGERLRTRSRLDSFEQRDDHVRAT  171 (549)
T ss_dssp             SBCCEEEESSBTSCEEEE-E-CCCBTTTSCCCSSCSSCCEECCHHHHHHHHH--HHHGGGEECSEEEEEEEECSSCEEEE
T ss_pred             CCCEEEEEECCCCCEEEE-C-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--HCCCCEEEECCEEEEEEEECCEEEEE
T ss_conf             541257886158807884-2-4665443346544653345555999999998--50366799467999999835807999


Q ss_pred             EE--CCC--CEEEECEEEEECCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             98--678--489705689931887679999999669711148
Q T0604           257 TL--SNG--EEIKSRHVVLAVGHSARDTFEMLHERGVYMEAK  294 (549)
Q Consensus       257 ~t--~~g--~~i~ad~VVlAtGhsard~~~~l~~~Gi~~~~k  294 (549)
                      ..  .+|  +++.++.||.|+|..+  +.+  +..|+.+...
T Consensus       172 ~~~~~~g~~~~v~a~~vVGADG~~S--~VR--~~lgi~~~~~  209 (549)
T 2r0c_A          172 ITDLRTGATRAVHARYLVACDGASS--PTR--KALGIDAPPR  209 (549)
T ss_dssp             EEETTTCCEEEEEEEEEEECCCTTC--HHH--HHHTCCCCBS
T ss_pred             EEECCCCCEEEEEEEEEEECCCCCC--HHH--HHCCCCCCCC
T ss_conf             9756999569999769996378865--889--9718764577


No 59 
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.46  E-value=4.9e-12  Score=92.23  Aligned_cols=175  Identities=13%  Similarity=0.031  Sum_probs=97.2

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCC-----CH----HHH---HHHHCCCCCC--
Q ss_conf             766898798799999999996599089983588832110100012435423-----60----234---5541355652--
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTL-----NP----ESN---VQFGEGGAGT--  173 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~-----~~----~~n---~~~g~ggag~--  173 (549)
                      -.|+|||||..|+.+|+.|+++|++|+||||++-..+.+....++..++.-     +.    ++.   ..+. ..++.  
T Consensus        33 ~DvvIIGgGi~G~s~A~~La~~G~~V~LiEk~d~a~GtS~~ss~liHgGirYl~~~~~~l~~~~l~er~~l~-~~ap~l~  111 (571)
T 2rgh_A           33 LDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQ-GIAPHIP  111 (571)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGTCHHHHHHHHHHHHHHH-HHCTTSS
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHH
T ss_conf             758998942999999999996899799996997855023502026686530245699999999999999999-9656763


Q ss_pred             ---------CCCHHHHHHHHHHCCCHHHHHHHHHH---CCCCCCCCC------------------CCCCCEECCHHHHHH
Q ss_conf             ---------12404553220002117899999996---689510013------------------676410001279999
Q T0604           174 ---------FSDGKLYSQVKDPNFYGRKVITEFVE---AGAPEEILY------------------VSKPHIGTFKLVTMI  223 (549)
Q Consensus       174 ---------fsdgkl~t~~~~~~~~~~~vl~~~~~---~Ga~~~i~~------------------~~kph~gtd~~~~vv  223 (549)
                               +.++.............-...+.+..   .+.+.....                  ...+.-+......++
T Consensus       112 ~~l~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~g~~~~~d~~~d~~~l~  191 (571)
T 2rgh_A          112 KPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYLDFRNNDARLV  191 (571)
T ss_dssp             EECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCTTEEEEEEECCEECCHHHHH
T ss_pred             HCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHCCCCCHHHCEEEEECCCCCCCHHHHH
T ss_conf             10674487875687335302678868999999866446998501068889988588667667169997663355808899


Q ss_pred             HHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCC-----CEEEECEEEEECCCCHHHHHHH
Q ss_conf             99999999669889981343320405875899998678-----4897056899318876799999
Q T0604           224 EKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG-----EEIKSRHVVLAVGHSARDTFEM  283 (549)
Q Consensus       224 ~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g-----~~i~ad~VVlAtGhsard~~~~  283 (549)
                      ..+...+.+.|+.+..+++|+++..+++++.++.+.+.     .++.|+.||.|+|..+..+..|
T Consensus       192 ~~~~~~a~~~G~~i~~~~~V~~~~~~~~~~~~~~~~d~~~~~~~~i~a~~VVnAaG~wad~i~~~  256 (571)
T 2rgh_A          192 IDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNL  256 (571)
T ss_dssp             HHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTT
T ss_pred             HHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHH
T ss_conf             99999999727454540468864115861443345541678348998106887341025678752


No 60 
>2vq7_A Flavin-containing monooxygenase; NADP, drug metabolism NADP, oxidoreductase, drug metabolism; HET: FAD NAP EPE PGE PG4; 2.60A {Methylophaga SP} PDB: 2vqb_A*
Probab=99.44  E-value=2.5e-13  Score=100.30  Aligned_cols=153  Identities=17%  Similarity=0.185  Sum_probs=82.7

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCC------CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCH
Q ss_conf             776776689879879999999999659------90899835888321101000124354236023455413556521240
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMG------FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDG  177 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G------~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdg  177 (549)
                      .+|.+||+|||||||||.+|..|++.|      .+|+||||.+.+|+-....   +..+. +.....    .-...+..-
T Consensus         4 ~sm~krVaIIGAGpsGL~aa~~L~~~g~~~~~~~~v~vfE~~~~vGG~W~~~---~~~~~-~~~~~~----v~s~~Y~~l   75 (461)
T 2vq7_A            4 GSMATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYT---WRTGL-DENGEP----VHSSMYRYL   75 (461)
T ss_dssp             ----CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCC---SCCSB-CTTSSB----CCCCCCTTC
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCC---CCCCC-CCCCCC----CCCCCCCCC
T ss_conf             8899819998926999999999997283436899889995699977754136---78775-566665----545312343


Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCC--EEEEECCCCCCEECCC-EEE
Q ss_conf             4553220002117899999996689510013676410001279999999999996698--8998134332040587-589
Q T0604           178 KLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG--EIRFSTRVDDLHMEDG-QIT  254 (549)
Q Consensus       178 kl~t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~--~i~~~t~V~~i~~~~g-~v~  254 (549)
                      .+++ .+       +.. .|..+-.++........++   ....+.+.|+..+++.+.  .++|+++|+.+...++ +..
T Consensus        76 ~~n~-pk-------~~~-~fsdfp~~~~~~~~~~~fp---~~~~v~~Yl~~ya~~f~L~~~i~~~t~V~~v~~~~~~~~w  143 (461)
T 2vq7_A           76 WSNG-PK-------ECL-EFADYTFDEHFGKPIASYP---PREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTF  143 (461)
T ss_dssp             BCSS-CG-------GGS-CBTTBCHHHHHSSCCCSSC---BHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEE
T ss_pred             CCCC-CH-------HHH-CCCCCCCCHHCCCCCCCCC---CHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEE
T ss_conf             2277-25-------553-2789987221066655689---9999999999999872831057631089999851456546


Q ss_pred             EEEECCC-----CEEEECEEEEECCCC
Q ss_conf             9998678-----489705689931887
Q T0604           255 GVTLSNG-----EEIKSRHVVLAVGHS  276 (549)
Q Consensus       255 gV~t~~g-----~~i~ad~VVlAtGhs  276 (549)
                      .|.+.+.     .+..+|+||+|+||.
T Consensus       144 ~v~~~~~~~~~~~~~~fD~VVvAtG~~  170 (461)
T 2vq7_A          144 TVTVQDHTTDTIYSAAFDYVVCCTGHF  170 (461)
T ss_dssp             EEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred             EEEEEECCCCCEEEEEEEEEEECCCCC
T ss_conf             676642046604899956899896667


No 61 
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5
Probab=99.44  E-value=1.2e-12  Score=96.02  Aligned_cols=129  Identities=21%  Similarity=0.295  Sum_probs=86.4

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC-----CCHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf             776689879879999999999659908998358883211010001243542-----360234554135565212404553
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRT-----LNPESNVQFGEGGAGTFSDGKLYS  181 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~-----~~~~~n~~~g~ggag~fsdgkl~t  181 (549)
                      .-+|+|||||+|||.+|..|.+.|++++||||++.+|+.       |..+.     +|..+.       ...|+      
T Consensus        16 ~~dV~IIGAG~sGl~~a~~l~~~g~~~~i~E~~~~vGGt-------W~~n~ypg~~~d~~s~-------~y~~s------   75 (542)
T 1w4x_A           16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGV-------WYWNRYPGARCDIESI-------EYCYS------   75 (542)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH-------HHHCCCTTCBCSSCTT-------TSSCC------
T ss_pred             CCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC-------CCCCCCCCCCCCCCCC-------CCCCC------
T ss_conf             789999997399999999998779786999679997561-------5267889855366654-------30058------


Q ss_pred             HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCC--EEEEECCCCCCEECCC-EEEEEEE
Q ss_conf             220002117899999996689510013676410001279999999999996698--8998134332040587-5899998
Q T0604           182 QVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG--EIRFSTRVDDLHMEDG-QITGVTL  258 (549)
Q Consensus       182 ~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~--~i~~~t~V~~i~~~~g-~v~gV~t  258 (549)
                            +. ...   +.....+       ..|+   ....+.+.|...+.+.+.  .++|+++|+....+++ ...-|.+
T Consensus        76 ------~~-~~~---~~~~~~~-------~~~~---~~~ei~~Yl~~~a~~~~l~~~i~~~t~V~~~~~~~~~~~w~v~~  135 (542)
T 1w4x_A           76 ------FS-EEV---LQEWNWT-------ERYA---SQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT  135 (542)
T ss_dssp             ------SC-HHH---HHHCCCC-------BSSC---BHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE
T ss_pred             ------CC-CCC---CCCCCCC-------CCCC---CHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCEEEEC
T ss_conf             ------52-002---6789988-------7789---98999999999999809976568545999975116777348982


Q ss_pred             CCCCEEEECEEEEECCC
Q ss_conf             67848970568993188
Q T0604           259 SNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       259 ~~g~~i~ad~VVlAtGh  275 (549)
                      .+|+++.|+.||+|+|+
T Consensus       136 ~~g~~~~a~~vi~a~G~  152 (542)
T 1w4x_A          136 NHGDRIRARYLIMASGQ  152 (542)
T ss_dssp             TTCCEEEEEEEEECCCS
T ss_pred             CCCCEEEEEEEEECCCC
T ss_conf             68978999899734787


No 62 
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.44  E-value=1.6e-12  Score=95.24  Aligned_cols=110  Identities=18%  Similarity=0.386  Sum_probs=75.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      ..+|||||+|||||+||+.|++.|++|+|||+.+..+ ...         ...+..+          |            
T Consensus         5 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~lie~~~~gg-~~~---------~~~~~~~----------~------------   52 (320)
T 1trb_A            5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGG-QLT---------TTTEVEN----------W------------   52 (320)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTG-GGG---------GCSBCCC----------S------------
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCC-EEE---------ECCCCCC----------C------------
T ss_conf             3559999987999999999997899889996048786-688---------3563046----------6------------


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEE
Q ss_conf             21178999999966895100136764100012799999999999966988998134332040587589999867848970
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKS  266 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~a  266 (549)
                                            ...+..  .....+...+.+.+++++++++.+ +|+.+..+++.++ |.++++ ++.+
T Consensus        53 ----------------------~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~~-v~~~~~-~~~~  105 (320)
T 1trb_A           53 ----------------------PGDPND--LTGPLLMERMHEHATKFETEIIFD-HINKVDLQNRPFR-LNGDNG-EYTC  105 (320)
T ss_dssp             ----------------------TTCCSS--CBHHHHHHHHHHHHHHTTCEEECC-CEEEEECSSSSEE-EEESSC-EEEE
T ss_pred             ----------------------CCCCCC--CCHHHHHHHHHHHHHHCCCEEEEE-EEEEEEECCCEEE-EEECCC-EEEC
T ss_conf             ----------------------777000--668999999999999849799972-7999990498599-997998-9989


Q ss_pred             CEEEEECCC
Q ss_conf             568993188
Q T0604           267 RHVVLAVGH  275 (549)
Q Consensus       267 d~VVlAtGh  275 (549)
                      |+||+|||.
T Consensus       106 d~lIiAtGs  114 (320)
T 1trb_A          106 DALIIATGA  114 (320)
T ss_dssp             EEEEECCCE
T ss_pred             CEEEEEECC
T ss_conf             999999898


No 63 
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavoprotein, 3D-structure, oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.43  E-value=1.1e-12  Score=96.29  Aligned_cols=48  Identities=31%  Similarity=0.506  Sum_probs=40.8

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEC-CCCCCCCCCCCC
Q ss_conf             877677668987987999999999965990899835-888321101000
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVER-GKEVRERTKDTF  150 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlEr-g~~vg~r~~~~~  150 (549)
                      |...+++|||||||+|||.||+.|+++|++|+|||+ .+.+|+|.....
T Consensus        40 ~~~~~kkV~IIGaGiaGLsaA~~L~~~G~~V~VlEA~s~r~GGr~~T~~   88 (376)
T 2e1m_A           40 PPGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFH   88 (376)
T ss_dssp             SCCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEEC
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEE
T ss_conf             9999986999897889999999998689908999678987510489987


No 64 
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.43  E-value=3.2e-12  Score=93.41  Aligned_cols=142  Identities=13%  Similarity=0.097  Sum_probs=89.2

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             767766898798799999999996-5990899835888321101000124354236023455413556521240455322
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~-~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      .+...|||||||||||+||+.|++ .|++|+|||+++.+|++...... .....+                    +    
T Consensus        37 ~~e~DVvVIGaGpAGL~aA~~La~~aG~~V~VlE~~~~~GG~~~~~g~-~~~~~~--------------------~----   91 (284)
T 1rp0_A           37 YAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQ-LFSAMI--------------------V----   91 (284)
T ss_dssp             HTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCST-TCCCEE--------------------E----
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCE-ECCHHH--------------------H----
T ss_conf             468998998977899999999987489759998257889861581787-278899--------------------7----


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEEC----
Q ss_conf             0002117899999996689510013676410001279999999999996698899813433204058758999986----
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS----  259 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~----  259 (549)
                       +.  ..   ...+.+++........  ..........+...+.+.+...+.++...+.+..+..+++++.++...    
T Consensus        92 -~~--~~---~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~gv~~~~~~~  163 (284)
T 1rp0_A           92 -RK--PA---HLFLDEIGVAYDEQDT--YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALV  163 (284)
T ss_dssp             -ET--TT---HHHHHHHTCCCEECSS--EEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHH
T ss_pred             -HH--HH---HHHHHHHCCEEECCCC--CCEECCCHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCEEEEEEECHHHH
T ss_conf             -66--67---8889971971302675--5312231999999999999866977953653101320598576899141001


Q ss_pred             ----------CCCEEEECEEEEECCCCHHH
Q ss_conf             ----------78489705689931887679
Q T0604           260 ----------NGEEIKSRHVVLAVGHSARD  279 (549)
Q Consensus       260 ----------~g~~i~ad~VVlAtGhsard  279 (549)
                                ++..+.++.+|.++|+.+..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~i~~~G~~a~~  193 (284)
T 1rp0_A          164 AQNHHTQSCMDPNVMEAKIVVSSCGHDGPF  193 (284)
T ss_dssp             HTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred             HHHCCCCCCCCCCCCCCCEEEECCCCCCCH
T ss_conf             031244224797011786699898863310


No 65 
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.43  E-value=1.9e-12  Score=94.76  Aligned_cols=168  Identities=17%  Similarity=0.110  Sum_probs=93.0

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCC-C---------HHHHHHHHC--------C
Q ss_conf             766898798799999999996599089983588832110100012435423-6---------023455413--------5
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTL-N---------PESNVQFGE--------G  169 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~-~---------~~~n~~~g~--------g  169 (549)
                      -.|||||||.+|+++|+.|+++|.+|+||||+....+.+....++...... .         ..+...+-+        .
T Consensus        18 ~DvvIIGaGi~G~s~A~~La~~G~~V~liE~~~~~~gaS~~s~G~l~~~~~~~~~~~~~~l~~~s~~~~~~~~~~~~~~~   97 (382)
T 1ryi_A           18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALS   97 (382)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             89999994299999999999889958999599998745466343407587778644999999998877887654102232


Q ss_pred             CC-CCCC-CHHHHHHHHHHCCCHHHHHHHHHH------------------CCCC-CCC-CCCCCCCEECCHHHHHHHHHH
Q ss_conf             56-5212-404553220002117899999996------------------6895-100-136764100012799999999
Q T0604           170 GA-GTFS-DGKLYSQVKDPNFYGRKVITEFVE------------------AGAP-EEI-LYVSKPHIGTFKLVTMIEKMR  227 (549)
Q Consensus       170 ga-g~fs-dgkl~t~~~~~~~~~~~vl~~~~~------------------~Ga~-~~i-~~~~kph~gtd~~~~vv~~L~  227 (549)
                      +. -.+. .|.+....      .......+..                  .... .+. ...-.|..+......++..|.
T Consensus        98 g~~~~~~~~g~l~~a~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~~v~~~~~~~~l~  171 (382)
T 1ryi_A           98 GVDIRQHNGGMFKLAF------SEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYV  171 (382)
T ss_dssp             CCCCCCBCCCEEEEES------SHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCC------CCCCCCCCCCHHCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf             3222223432110111------1122233210000122113550124430876677740389985034311101122210


Q ss_pred             HHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHHHHHHH
Q ss_conf             99996698899813433204058758999986784897056899318876799999
Q T0604           228 ATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEM  283 (549)
Q Consensus       228 ~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsard~~~~  283 (549)
                      +.+...|++++.++.+..+..+++. ..+.+.+| ++.|+.||+|+|..+++.+.+
T Consensus       172 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~t~~g-~i~a~~vV~a~G~~~~~l~~~  225 (382)
T 1ryi_A          172 KAAKMLGAEIFEHTPVLHVERDGEA-LFIKTPSG-DVWANHVVVASGVWSGMFFKQ  225 (382)
T ss_dssp             HHHHHTTCEEETTCCCCEEECSSSS-EEEEETTE-EEEEEEEEECCGGGTHHHHHH
T ss_pred             HHHHHHHCEEEECCCCCCCCCCCCC-CEECCCCC-EEECCEEEEECCCCCCCCCCC
T ss_conf             2555420103200111011345531-00012474-185133898148644200001


No 66 
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.43  E-value=2.5e-12  Score=94.07  Aligned_cols=53  Identities=17%  Similarity=0.240  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCEE--CCCEEEEEEECCCCEEEECEEEEEC
Q ss_conf             99999999999966988998134332040--5875899998678489705689931
Q T0604           220 VTMIEKMRATIIELGGEIRFSTRVDDLHM--EDGQITGVTLSNGEEIKSRHVVLAV  273 (549)
Q Consensus       220 ~~vv~~L~~~l~~~G~~i~~~t~V~~i~~--~~g~v~gV~t~~g~~i~ad~VVlAt  273 (549)
                      ..+.++|.+.++..|+++++++.|++|..  ++++++||.+ +|+++.|+.||...
T Consensus       242 ~~l~qal~r~~~~~Gg~i~ln~~V~~I~~~~e~~~~~gV~~-~g~~i~a~~vI~~~  296 (453)
T 2bcg_G          242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADP  296 (453)
T ss_dssp             THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECG
T ss_pred             HHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCEEEEEEE-CCEEEECCEEEECH
T ss_conf             89999999999970999995994459999578987999997-99999939899894


No 67 
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, FAD, flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.42  E-value=5.8e-12  Score=91.74  Aligned_cols=60  Identities=22%  Similarity=0.356  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHH
Q ss_conf             799999999999966988998134332040587589999867848970568993188767
Q T0604           219 LVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR  278 (549)
Q Consensus       219 ~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsar  278 (549)
                      ...+...+.+.+++.|++++++++|+.+..+++.+..+++.+|++++||.||.|+|....
T Consensus       183 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~~~~~~~~~~dG~~i~~D~vi~a~G~~pn  242 (404)
T 3fg2_P          183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN  242 (404)
T ss_dssp             CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCEEEEEEECCCCEEEECEEEEEECCCCC
T ss_conf             467777788988715968971644899994399799999679989984889996175158


No 68 
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.42  E-value=6.5e-12  Score=91.47  Aligned_cols=56  Identities=20%  Similarity=0.297  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCC
Q ss_conf             799999999999966988998134332040587589999867848970568993188
Q T0604           219 LVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       219 ~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGh  275 (549)
                      ...+.+.+.+.+++.|++++++++|+.+...++.+. +++.+|+++++|.||+|+|.
T Consensus       190 ~~~~~~~~~~~l~~~gI~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~D~vi~a~G~  245 (452)
T 2cdu_A          190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEII-TKTLDGKEIKSDIAILCIGF  245 (452)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEE-EEETTSCEEEESEEEECCCE
T ss_pred             CCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCC-CCCCCCCEECCCEEEEEEEE
T ss_conf             422110122221202466325764220102322111-22332212302136876631


No 69 
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.40  E-value=4.9e-12  Score=92.25  Aligned_cols=153  Identities=18%  Similarity=0.152  Sum_probs=77.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             7766898798799999999996599-089983588832110100012435423602345541355652124045532200
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      +-+|+|||||||||.||+.|+++|+ +|+|+||.+.+......+       .+.+.........|  .+ + .+......
T Consensus         4 p~dV~IVGaGpaGl~~A~~L~~~G~~~V~v~Er~~~~~~~g~gi-------~l~p~~~~~L~~lG--l~-~-~l~~~~~~   72 (410)
T 3c96_A            4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGI-------NIQPAAVEALAELG--LG-P-ALAATAIP   72 (410)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEE-------EECHHHHHHHHHTT--CH-H-HHHHHSEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEE-------EECHHHHHHHHHCC--CH-H-HHHHHCCC
T ss_conf             98799999688999999999858998689996699888787699-------98989999999879--93-8-99840778


Q ss_pred             HCCCHHHHHHHHHHCCCCC----CCCCCCCCCEECC-HHHHHHHHHHHHHHH--CCCEEEEECCCCCCEECCCEEEEEEE
Q ss_conf             0211789999999668951----0013676410001-279999999999996--69889981343320405875899998
Q T0604           186 PNFYGRKVITEFVEAGAPE----EILYVSKPHIGTF-KLVTMIEKMRATIIE--LGGEIRFSTRVDDLHMEDGQITGVTL  258 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~----~i~~~~kph~gtd-~~~~vv~~L~~~l~~--~G~~i~~~t~V~~i~~~~g~v~gV~t  258 (549)
                      .. ...    ++...|...    .......++.+.. ....+...+.+.+..  .+..++++++|+++..+.+.+... +
T Consensus        73 ~~-~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~~~~i~~~~~v~~v~~~~~~v~~~-~  146 (410)
T 3c96_A           73 TH-ELR----YIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIG-A  146 (410)
T ss_dssp             EC-EEE----EECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEE-E
T ss_pred             CC-EEE----EEECCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCEEEEE-E
T ss_conf             50-389----99589988983145422356886056549999999875443037852899456278999518816898-5


Q ss_pred             CCC----CEEEECEEEEECCCC
Q ss_conf             678----489705689931887
Q T0604           259 SNG----EEIKSRHVVLAVGHS  276 (549)
Q Consensus       259 ~~g----~~i~ad~VVlAtGhs  276 (549)
                      .++    +++.+|.||.|+|..
T Consensus       147 ~~~~~~~~~i~ad~vI~AdG~~  168 (410)
T 3c96_A          147 RDGHGKPQALGADVLVGADGIH  168 (410)
T ss_dssp             EETTSCEEEEEESEEEECCCTT
T ss_pred             ECCCCCCEEEEECEEEECCCCC
T ss_conf             0586442588516898616753


No 70 
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus HB8} PDB: 2eq8_A* 2eq9_A*
Probab=99.38  E-value=1e-11  Score=90.27  Aligned_cols=35  Identities=43%  Similarity=0.645  Sum_probs=31.3

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             668987987999999999965990899835888321
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      .|||||+||||+.||..|++.|++|+|+||++ +|+
T Consensus         8 DvvIIG~G~AG~~aA~~~~~~g~~V~liEk~~-~GG   42 (464)
T 2eq6_A            8 DLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGG   42 (464)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTH
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCC
T ss_conf             99999878899999999985989399996799-797


No 71 
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A*
Probab=99.37  E-value=1.5e-11  Score=89.10  Aligned_cols=41  Identities=29%  Similarity=0.562  Sum_probs=36.6

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             77677668987987999999999965990899835888321
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      +++.-.|||||+||||+.||..|++.|.+|+|+|+.+.+|+
T Consensus         3 ~~~~yDvvIIGaG~aG~~aA~~aa~~g~kV~lIE~~~~~GG   43 (474)
T 1zmd_A            3 QPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGG   43 (474)
T ss_dssp             CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSH
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             98624889989888999999999868897899982799654


No 72 
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.37  E-value=5.5e-11  Score=85.62  Aligned_cols=49  Identities=29%  Similarity=0.324  Sum_probs=39.0

Q ss_pred             ECCCCCCCCCCCCCCEEECCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2048874302689854201235-3357899999999999999999999752
Q T0604           497 IKRGKDFQSVNLKGFYPAGEGA-GYAGGILSAGIDGIKVAEAVARDIVAAM  546 (549)
Q Consensus       497 i~r~~tleS~~i~GLY~~GEga-GyagGI~saa~~G~~~a~~i~~~~~~~~  546 (549)
                      |..|+++|| +++|+|.||+.+ |...-+.+|.-+|..||.+|..++++++
T Consensus       270 i~vd~~~~T-s~~giyaaGD~~~~~~~~~~~A~~~G~~Aa~~i~~~~~~~~  319 (319)
T 3cty_A          270 IVVDSRQRT-SVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSISKK  319 (319)
T ss_dssp             BCCCTTCBC-SSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred             EEECCCCCC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             853979722-89999999976889614999999999999999998876079


No 73 
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.36  E-value=4.2e-11  Score=86.35  Aligned_cols=175  Identities=14%  Similarity=0.017  Sum_probs=97.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHH---------HH---HHHHCCCCCCCC
Q ss_conf             766898798799999999996599089983588832110100012435423602---------34---554135565212
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPE---------SN---VQFGEGGAGTFS  175 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~---------~n---~~~g~ggag~fs  175 (549)
                      -.|+|||||..|+.+|+.|+++|++|+||||++-..+.+....++..++.-..+         +-   ..+.+ .++.+.
T Consensus         4 ~DV~IIG~Gi~G~~~A~~la~rG~~V~lvEk~d~a~GaS~~ss~lihgG~rYl~~~~~~l~~e~~~er~~l~~-~ap~l~   82 (501)
T 2qcu_A            4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLK-MAPHIA   82 (501)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHH-HCTTTE
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HCHHHE
T ss_conf             8999989679999999999978998999979967471435403263745322676889999999999999999-681341


Q ss_pred             --CHHHHHHHHH-HCCCHHHHHHHHHHCCCCCCCCCC-------------------CCCCEECCHHHHHHHHHHHHHHHC
Q ss_conf             --4045532200-021178999999966895100136-------------------764100012799999999999966
Q T0604           176 --DGKLYSQVKD-PNFYGRKVITEFVEAGAPEEILYV-------------------SKPHIGTFKLVTMIEKMRATIIEL  233 (549)
Q Consensus       176 --dgkl~t~~~~-~~~~~~~vl~~~~~~Ga~~~i~~~-------------------~kph~gtd~~~~vv~~L~~~l~~~  233 (549)
                        -+.+...... ...............+........                   -.+.-+......+...+...+.+.
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~a~~~  162 (501)
T 2qcu_A           83 FPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRK  162 (501)
T ss_dssp             EEEEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHHHHHHHHT
T ss_pred             EECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHCEEEEECCEEECCHHHHHHHHHHHHHC
T ss_conf             30644999528420899999999998735885446624666640433466655167970687980368899999999862


Q ss_pred             CCEEEEECCCCCCEECCCEEEEEEECC-----CCEEEECEEEEECCCCHHHHHHHH
Q ss_conf             988998134332040587589999867-----848970568993188767999999
Q T0604           234 GGEIRFSTRVDDLHMEDGQITGVTLSN-----GEEIKSRHVVLAVGHSARDTFEML  284 (549)
Q Consensus       234 G~~i~~~t~V~~i~~~~g~v~gV~t~~-----g~~i~ad~VVlAtGhsard~~~~l  284 (549)
                      |+++..++.|+.+..+++.. +|.+.+     ..++.|+.||.|+|..+.+...++
T Consensus       163 g~~~~~~~~V~~i~~~~~~~-~v~~~~~~~~~~~~i~a~~vVnaaG~wa~~~~~~~  217 (501)
T 2qcu_A          163 GGEVLTRTRATSARRENGLW-IVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDG  217 (501)
T ss_dssp             TCEEECSEEEEEEEEETTEE-EEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHH
T ss_pred             CCCCCCCEEEEEEEEECCEE-EEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHH
T ss_conf             64233220589999864616-99987416895787650048966870178776533


No 74 
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.36  E-value=1.5e-11  Score=89.09  Aligned_cols=169  Identities=15%  Similarity=0.155  Sum_probs=93.7

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCCCCCC--CCCCCCCCCC-------------CHHHHHH--HH
Q ss_conf             67766898798799999999996599-08998358883211010--0012435423-------------6023455--41
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEVRERTKD--TFGFWRKRTL-------------NPESNVQ--FG  167 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~vg~r~~~--~~~~~~~~~~-------------~~~~n~~--~g  167 (549)
                      ...+|||||||.+||.+|+.|+++|. +|+||||.....+....  ..++.+....             ..++...  ..
T Consensus         5 ~~~~IvIIGaGi~GlstA~~La~~G~~~V~vlE~~~~~~g~sas~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~   84 (438)
T 3dje_A            5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNGWKND   84 (438)
T ss_dssp             TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             98998998944999999999996799988998499998774547786763156432355420789999999999999853


Q ss_pred             CCCCCCCCC-HHHHHHHHHHCCCHHHHHHHHHH----CCCC-----CC-----------------CCCCCCCCEECCHHH
Q ss_conf             355652124-04553220002117899999996----6895-----10-----------------013676410001279
Q T0604           168 EGGAGTFSD-GKLYSQVKDPNFYGRKVITEFVE----AGAP-----EE-----------------ILYVSKPHIGTFKLV  220 (549)
Q Consensus       168 ~ggag~fsd-gkl~t~~~~~~~~~~~vl~~~~~----~Ga~-----~~-----------------i~~~~kph~gtd~~~  220 (549)
                      ......|.. |.+.....+..   ...++....    .+..     .+                 .-....+..+.....
T Consensus        85 ~~~~~~~~~~G~~~~a~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~g~~~~~  161 (438)
T 3dje_A           85 PLFKPYYHDTGLLMSACSQEG---LDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHAR  161 (438)
T ss_dssp             TTTGGGEECCCEEEEECSHHH---HHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEECHH
T ss_pred             HCCCCCEEECCEEEEECCHHH---HHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEECHH
T ss_conf             176761774157998425668---99999999998607954540366666537411245554452589984888266289


Q ss_pred             HHHHHHHHHHHHCCCEEEEECCCCCCE---ECCCEEEEEEECCCCEEEECEEEEECCCCH
Q ss_conf             999999999996698899813433204---058758999986784897056899318876
Q T0604           221 TMIEKMRATIIELGGEIRFSTRVDDLH---MEDGQITGVTLSNGEEIKSRHVVLAVGHSA  277 (549)
Q Consensus       221 ~vv~~L~~~l~~~G~~i~~~t~V~~i~---~~~g~v~gV~t~~g~~i~ad~VVlAtGhsa  277 (549)
                      .+...+.+.+.+.|+++++.+.|+.+.   ..++....+.+.++..+.++.||+|+|..+
T Consensus       162 ~~~~~l~~~a~~~gv~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~vv~a~g~~s  221 (438)
T 3dje_A          162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA  221 (438)
T ss_dssp             HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred             HHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCHHH
T ss_conf             999999998763472599987666788520234214554214664334562999255666


No 75 
>3lov_A Protoporphyrinogen oxidase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.36  E-value=1.8e-11  Score=88.75  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=39.3

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCC
Q ss_conf             677668987987999999999965--99089983588832110100
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQM--GFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~--G~~V~VlErg~~vg~r~~~~  149 (549)
                      .++||||||||+|||.||+.|+++  |++|+|||+.+.+|+|....
T Consensus         3 ~~kkV~IIGaGiaGL~aA~~L~~~~~G~~V~vlEa~~~~GGr~~t~   48 (475)
T 3lov_A            3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATY   48 (475)
T ss_dssp             CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEE
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEE
T ss_conf             8992999898889999999998469889889992799885767799


No 76 
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.36  E-value=3.1e-12  Score=93.45  Aligned_cols=35  Identities=26%  Similarity=0.212  Sum_probs=31.4

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             668987987999999999965990899835888321
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      .|||||+|||||.||+.|++.|++|+|+|++ .+|+
T Consensus         6 DviIIG~GpAGlsaA~~a~~~g~~v~viEk~-~~GG   40 (450)
T 1ges_A            6 DYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGG   40 (450)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTH
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CCCC
T ss_conf             8999887889999999999788929999479-9786


No 77 
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.34  E-value=3.3e-12  Score=93.32  Aligned_cols=138  Identities=20%  Similarity=0.170  Sum_probs=74.9

Q ss_pred             CEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             668987987999999999965--990899835888321101000124354236023455413556521240455322000
Q T0604           109 RPIVIGFGPCGLFAGLVLAQM--GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~--G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      ||+|||||||||.+|+.|+++  |++|+||||.+........+. +...........    .   + +.+..........
T Consensus         2 rV~IVGaGpaGl~~A~~La~~~~G~~V~V~Er~~~~~~~g~gi~-l~~~~~~~~~~~----~---~-~~~~~~~~~~~~~   72 (381)
T 3c4a_A            2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVV-LPGRPGQHPANP----L---S-YLDAPERLNPQFL   72 (381)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEE-EESCTTTCTTCG----G---G-GSSCGGGGCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEE-ECCHHHHHHHHH----C---C-CHHHHHHHCCCEE
T ss_conf             36999908899999999995599996899907999887652687-471799999850----6---6-3466876344401


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEE
Q ss_conf             21178999999966895100136764100012799999999999966988998134332040587589999867848970
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKS  266 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~a  266 (549)
                      ...  .    ....+. ........++. ......+.+.|++++.+.|+++++++.++++            .++.++.+
T Consensus        73 ~~~--~----~~~~~~-~~~~~~~~~~~-~i~r~~l~~~L~~~a~~~gv~i~~~~~~~~~------------~~~~~~~a  132 (381)
T 3c4a_A           73 EDF--K----LVHHNE-PSLMSTGVLLC-GVERRGLVHALRDKCRSQGIAIRFESPLLEH------------GELPLADY  132 (381)
T ss_dssp             CCE--E----EEESSS-EEECCCCSCEE-EEEHHHHHHHHHHHHHHTTCEEETTCCCCSG------------GGCCGGGC
T ss_pred             CCE--E----EECCCC-CCCCCCCCCEE-EECHHHHHHHHHHHHHHCCCCEEECCEEEEE------------CCCCEEEE
T ss_conf             121--3----421687-33335787545-7535779999999998669713102203662------------47860368


Q ss_pred             CEEEEECCC
Q ss_conf             568993188
Q T0604           267 RHVVLAVGH  275 (549)
Q Consensus       267 d~VVlAtGh  275 (549)
                      |.||.|+|-
T Consensus       133 dlvVgADG~  141 (381)
T 3c4a_A          133 DLVVLANGV  141 (381)
T ss_dssp             SEEEECCGG
T ss_pred             EEEEEECCC
T ss_conf             999951788


No 78 
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphide oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.34  E-value=1.5e-11  Score=89.21  Aligned_cols=109  Identities=19%  Similarity=0.316  Sum_probs=75.5

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             66898798799999999996599089983588832110100012435423602345541355652124045532200021
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPNF  188 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~~  188 (549)
                      .|||||||||||.||+.|++.|++|+|+|+.  .+++...+         .  +                      ...+
T Consensus         3 DvvIIGgG~AGl~aA~~l~~~g~~v~li~~~--~gg~~~~~---------~--~----------------------~~~~   47 (310)
T 1fl2_A            3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDT---------V--D----------------------IENY   47 (310)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGC---------C--E----------------------ECCB
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEEC--CCCEEEEC---------C--C----------------------CCCC
T ss_conf             5999998799999999999789988999807--88578834---------6--7----------------------5874


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEE--CCCEEEEEEECCCCEEEE
Q ss_conf             178999999966895100136764100012799999999999966988998134332040--587589999867848970
Q T0604           189 YGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM--EDGQITGVTLSNGEEIKS  266 (549)
Q Consensus       189 ~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~--~~g~v~gV~t~~g~~i~a  266 (549)
                                          ...+   ......+.+.+...+...+..+.+...+..+..  .+.....|.+.+|+.+.+
T Consensus        48 --------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~g~~~~~  104 (310)
T 1fl2_A           48 --------------------ISVP---KTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKA  104 (310)
T ss_dssp             --------------------TTBS---SEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEE
T ss_pred             --------------------CCCC---CCCHHHHHHHHHHHHHHHHHEEECCEEEEEEEEEEECCCEEEEEECCCCEEEC
T ss_conf             --------------------7775---46899999999998886521022237999998877318718999899819981


Q ss_pred             CEEEEECCC
Q ss_conf             568993188
Q T0604           267 RHVVLAVGH  275 (549)
Q Consensus       267 d~VVlAtGh  275 (549)
                      |+||+|||.
T Consensus       105 ~~lvlAtG~  113 (310)
T 1fl2_A          105 RSIIVATGA  113 (310)
T ss_dssp             EEEEECCCE
T ss_pred             CEEEECCCC
T ss_conf             868887799


No 79 
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.34  E-value=3.4e-11  Score=86.94  Aligned_cols=34  Identities=38%  Similarity=0.654  Sum_probs=31.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             7766898798799999999996599089983588
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .-.|||||||||||+||+.|++.|++|+|+||++
T Consensus         3 ~~DViIIGaGpAGlsaA~~l~~~g~~v~viEk~~   36 (455)
T 1ebd_A            3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN   36 (455)
T ss_dssp             ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             4798999978899999999996899799995799


No 80 
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green chemistry, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A*
Probab=99.33  E-value=2.2e-11  Score=88.16  Aligned_cols=134  Identities=24%  Similarity=0.326  Sum_probs=87.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             7766898798799999999996-599089983588832110100012435423602345541355652124045532200
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~-~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      .-.|+|||||++||.+|..|.+ .|++++|||+++.+|+-       |..+.         + .+...-+...++..+  
T Consensus         8 ~~dV~IIGAG~sGl~~a~~l~~~~~~~~~i~E~~~~vGGt-------W~~nr---------Y-pg~~~d~~~~~y~~s--   68 (540)
T 3gwf_A            8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGT-------WYWNR---------Y-PGALSDTESHLYRFS--   68 (540)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTH-------HHHCC---------C-TTCEEEEEGGGSSCC--
T ss_pred             CCCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC-------CCCCC---------C-CCCEECCCCCCCCCC--
T ss_conf             0899998953999999999987089897999769997277-------74788---------9-983255665243068--


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCC--EEEEECCCCCCEECCC-EEEEEEECCCC
Q ss_conf             02117899999996689510013676410001279999999999996698--8998134332040587-58999986784
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG--EIRFSTRVDDLHMEDG-QITGVTLSNGE  262 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~--~i~~~t~V~~i~~~~g-~v~gV~t~~g~  262 (549)
                        +. ..   .+....      + ...|+   ....+.+.|...+++.+.  .|+|+++|+++..+++ ...-+.+.+++
T Consensus        69 --~~-~~---~~~~~~------~-~~~~~---~~~ei~~Yl~~~a~~~~l~~~i~~~t~V~~~~~~~~~~~~~~~~~~~~  132 (540)
T 3gwf_A           69 --FD-RD---LLQEST------W-KTTYI---TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGE  132 (540)
T ss_dssp             --SC-HH---HHHHCC------C-SBSEE---EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSC
T ss_pred             --CC-CC---CCCCCC------C-CCCCC---CHHHHHHHHHHHHHHHCCCCCEECCEEEEEEEECCCCCCEEEEEECCC
T ss_conf             --77-45---477899------9-88899---989999999999999599561773327999862355462123430574


Q ss_pred             EEEECEEEEECCC
Q ss_conf             8970568993188
Q T0604           263 EIKSRHVVLAVGH  275 (549)
Q Consensus       263 ~i~ad~VVlAtGh  275 (549)
                      ++.|+.||.|+|+
T Consensus       133 ~~~~~~~i~a~G~  145 (540)
T 3gwf_A          133 VYRAKYVVNAVGL  145 (540)
T ss_dssp             EEEEEEEEECCCS
T ss_pred             EEEEEEEEEEEEC
T ss_conf             2554210045410


No 81 
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thioredoxin reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.32  E-value=2.4e-11  Score=87.92  Aligned_cols=112  Identities=17%  Similarity=0.292  Sum_probs=74.7

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             67766898798799999999996599089983588832110100012435423602345541355652124045532200
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      ....|+|||||||||.||+.|++.|++|+|+|..  +|+....           ..+-+        .+           
T Consensus       211 ~~yDVvIIGgGpAGlsAA~~lar~G~~V~liee~--~GG~~~~-----------~~~i~--------n~-----------  258 (521)
T 1hyu_A          211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLD-----------TVDIE--------NY-----------  258 (521)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTT-----------CSCBC--------CB-----------
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEC--CCCEEEE-----------CCCCC--------CC-----------
T ss_conf             9885899967899999999999789988999816--8866764-----------27728--------74-----------


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEE--CCCEEEEEEECCCCE
Q ss_conf             021178999999966895100136764100012799999999999966988998134332040--587589999867848
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM--EDGQITGVTLSNGEE  263 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~--~~g~v~gV~t~~g~~  263 (549)
                                             ...+.   .........+...+...++++.....+.....  .++....|.+.+|+.
T Consensus       259 -----------------------~~~~~---~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~  312 (521)
T 1hyu_A          259 -----------------------ISVPK---TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAV  312 (521)
T ss_dssp             -----------------------TTBSS---BCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCE
T ss_pred             -----------------------CCCCH---HHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCE
T ss_conf             -----------------------55531---2457899999988875363156212200235675128816999899859


Q ss_pred             EEECEEEEECCC
Q ss_conf             970568993188
Q T0604           264 IKSRHVVLAVGH  275 (549)
Q Consensus       264 i~ad~VVlAtGh  275 (549)
                      +.++++|+|||.
T Consensus       313 i~a~~lIIATGa  324 (521)
T 1hyu_A          313 LKARSIIIATGA  324 (521)
T ss_dssp             EEEEEEEECCCE
T ss_pred             EEEEEEEECCCC
T ss_conf             994147772556


No 82 
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protein; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.32  E-value=6.9e-11  Score=85.03  Aligned_cols=59  Identities=20%  Similarity=0.138  Sum_probs=47.2

Q ss_pred             CHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCC
Q ss_conf             12799999999999966988998134332040587589999867848970568993188
Q T0604           217 FKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       217 d~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGh  275 (549)
                      .....+.+.|++.+.+.|+++...+.+.-...+++.+..+.+.++..+.+|.+|-|+|.
T Consensus       170 ~da~~f~~~L~~~a~~~GV~~i~~~~~~~~~~~~~~~~~~~l~~~~~i~ad~~iDcsG~  228 (511)
T 2weu_A          170 FDADEVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGF  228 (511)
T ss_dssp             ECHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGG
T ss_pred             ECHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEEEECCCEEEEEEEEEECCCC
T ss_conf             55377778887510046858994442003314678568765046606742345512554


No 83 
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.32  E-value=7.7e-11  Score=84.72  Aligned_cols=36  Identities=33%  Similarity=0.502  Sum_probs=33.8

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             668987987999999999965990899835888321
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      .|||||||||||.||+.|++.|++|+|+|+.+.+|+
T Consensus         4 DvvIIGgGpAGl~AA~~la~~G~~V~liE~~~~~GG   39 (468)
T 2qae_A            4 DVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGG   39 (468)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             499999888999999999978997899964899775


No 84 
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.31  E-value=3.3e-11  Score=87.07  Aligned_cols=32  Identities=28%  Similarity=0.290  Sum_probs=29.9

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             66898798799999999996599089983588
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .||||||||||+.||..|++.|++|+|+|++.
T Consensus         6 DvvIIG~G~AG~~aA~~l~~~g~~V~lie~~~   37 (463)
T 2r9z_A            6 DLIAIGGGSGGLAVAEKAAAFGKRVALIESKA   37 (463)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             79999888899999999996889199993699


No 85 
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin-- NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocarbons catabolism; HET: FAD; 1.80A {Pseudomonas putida}
Probab=99.31  E-value=3.8e-12  Score=92.90  Aligned_cols=107  Identities=19%  Similarity=0.300  Sum_probs=64.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             67766898798799999999996599--0899835888321101000124354236023455413556521240455322
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      |+.+|||||+|||||.||..|++.|.  +|+|+|+.+...        +.++.                 ++.       
T Consensus         1 M~t~VvIIGgG~AGl~aA~~Lr~~g~~~~Itli~~e~~~~--------y~r~~-----------------ls~-------   48 (410)
T 3ef6_A            1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP--------YDRPS-----------------LSK-------   48 (410)
T ss_dssp             --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS--------BCSGG-----------------GGT-------
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------CCCCC-----------------CHH-------
T ss_conf             9999899898899999999998269888099995888766--------76775-----------------428-------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCE
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867848
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE  263 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~  263 (549)
                              .++.     +..........               .+...+.+++++.+++|+.|..++..   |.+.++++
T Consensus        49 --------~~~~-----~~~~~~~~~~~---------------~~~~~~~~i~~~~~~~V~~id~~~~~---V~~~~g~~   97 (410)
T 3ef6_A           49 --------AVLD-----GSLERPPILAE---------------ADWYGEARIDMLTGPEVTALDVQTRT---ISLDDGTT   97 (410)
T ss_dssp             --------HHHH-----TSSSSCCBSSC---------------TTHHHHTTCEEEESCCEEEEETTTTE---EEETTSCE
T ss_pred             --------HHCC-----CCCCHHHHHHH---------------HHHHHHCCCEEEECCEEEEEECCCCE---EEECCCCE
T ss_conf             --------8748-----86416666532---------------99999769799989989999679748---99789819


Q ss_pred             EEECEEEEECCC
Q ss_conf             970568993188
Q T0604           264 IKSRHVVLAVGH  275 (549)
Q Consensus       264 i~ad~VVlAtGh  275 (549)
                      +.+|++|+|||.
T Consensus        98 ~~yd~LVlAtG~  109 (410)
T 3ef6_A           98 LSADAIVIATGS  109 (410)
T ss_dssp             EECSEEEECCCE
T ss_pred             EEECEEEECCCC
T ss_conf             981799998667


No 86 
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.31  E-value=2.2e-11  Score=88.17  Aligned_cols=33  Identities=30%  Similarity=0.435  Sum_probs=30.5

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             766898798799999999996599089983588
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      -.|||||+|||||.||+.|+++|++|+||||+.
T Consensus         5 yDVvIIGaGpAGl~AA~~~~~~G~~V~viEk~~   37 (467)
T 1zk7_A            5 VQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT   37 (467)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             629998888899999999985939499995798


No 87 
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structure initiative; 2.30A {Desulfovibrio vulgaris DP4}
Probab=99.30  E-value=2.7e-11  Score=87.62  Aligned_cols=36  Identities=14%  Similarity=0.241  Sum_probs=31.4

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCC
Q ss_conf             776689879879999999999659--908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~v  142 (549)
                      .++||||||||||+.||+.|++.|  .+|+|||+++..
T Consensus         3 MkkVvIIGgG~aGl~aA~~l~~~g~~~~Vtlie~~~~~   40 (472)
T 3iwa_A            3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI   40 (472)
T ss_dssp             -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred             CCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf             79899999889999999999717989819999489975


No 88 
>2pyx_A Tryptophan halogenase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina ncimb 400}
Probab=99.29  E-value=1.5e-10  Score=82.82  Aligned_cols=59  Identities=12%  Similarity=0.182  Sum_probs=50.3

Q ss_pred             CHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECC-CEEEEEEECCCCEEEECEEEEECCC
Q ss_conf             1279999999999996698899813433204058-7589999867848970568993188
Q T0604           217 FKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVTLSNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       217 d~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~-g~v~gV~t~~g~~i~ad~VVlAtGh  275 (549)
                      .....+.+.|++.+.+.|+..+.+.+|+++..++ |.+..+.+.+|.++++|.+|-|+|-
T Consensus       172 ~Da~~f~~~L~~~a~~~g~v~~~~~~V~~v~~~~~G~i~~l~~~~g~~i~aDffIDCSGf  231 (526)
T 2pyx_A          172 LNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGA  231 (526)
T ss_dssp             ECHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGG
T ss_pred             ECHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEECCCCEEEECEEEECCCC
T ss_conf             449999999999987518535873034343037888524797078848960579875664


No 89 
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodanese, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.29  E-value=8.7e-11  Score=84.40  Aligned_cols=91  Identities=18%  Similarity=0.249  Sum_probs=60.2

Q ss_pred             HHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCC
Q ss_conf             99966895100136764100012799999999999966988998134332040587589999867848970568993188
Q T0604           196 EFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       196 ~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGh  275 (549)
                      .+...|....+... .+++....-+.+.+.+.+.+++.|++++++++|+.+......   +.+.+|++++||.|++|+|.
T Consensus       205 ~l~~~g~~vtlve~-~~~~l~~~d~~~~~~l~~~L~~~GV~v~~~~~V~~ie~~~~~---~~~~~g~~i~aD~vi~a~G~  280 (588)
T 3ics_A          205 NLRERGIEVTLVEM-ANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAV---VRLKSGSVIQTDMLILAIGV  280 (588)
T ss_dssp             HHHHTTCEEEEECS-SSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE---EEETTSCEEECSEEEECSCE
T ss_pred             CCCCCCCCCCCEEE-CCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC---CCCCCCCCCCCCCCCEEEEE
T ss_conf             00122433321020-233222221013567889887322112105542101123211---10247873124544112455


Q ss_pred             CHHHHHHHHHHCCCCCC
Q ss_conf             76799999996697111
Q T0604           276 SARDTFEMLHERGVYME  292 (549)
Q Consensus       276 sard~~~~l~~~Gi~~~  292 (549)
                      ....  .++...|+.+.
T Consensus       281 ~Pn~--~ll~~~Gl~l~  295 (588)
T 3ics_A          281 QPES--SLAKGAGLALG  295 (588)
T ss_dssp             EECC--HHHHHTTCCBC
T ss_pred             ECCC--CCCCCCCCCCC
T ss_conf             2055--43211476578


No 90 
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- terminal domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.29  E-value=3.6e-12  Score=93.04  Aligned_cols=109  Identities=18%  Similarity=0.269  Sum_probs=72.5

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+.||||||||||||.||..|++.+.+|+|+|+.+...        ..++.                      +    
T Consensus         6 ~~k~trVvIIG~G~AGl~aA~~l~~~~~~V~li~~~~~~~--------~~~~~----------------------l----   51 (385)
T 3klj_A            6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP--------YYRPR----------------------L----   51 (385)
T ss_dssp             --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC--------BCGGG----------------------H----
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCC--------CCCCC----------------------H----
T ss_conf             8887999999998999999999827999789997998875--------65675----------------------5----


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCE
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867848
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE  263 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~  263 (549)
                             .+   .+. .....+-...               ...+.+++.+++++.+++|+.|..++..   |++.+|++
T Consensus        52 -------~~---~~~-~~~~~~~~~~---------------~~~~~~~~~~i~~~~~~~V~~Id~~~~~---V~~~~g~~  102 (385)
T 3klj_A           52 -------NE---IIA-KNKSIDDILI---------------KKNDWYEKNNIKVITSEFATSIDPNNKL---VTLKSGEK  102 (385)
T ss_dssp             -------HH---HHH-SCCCGGGTBS---------------SCHHHHHHTTCEEECSCCEEEEETTTTE---EEETTSCE
T ss_pred             -------HH---HHC-CCCCHHHHHH---------------HHHHHHHHCCCEEEECCEEEEEECCCCE---EEECCCCE
T ss_conf             -------78---755-8999899977---------------5899999879899978789999379629---99889989


Q ss_pred             EEECEEEEECCC
Q ss_conf             970568993188
Q T0604           264 IKSRHVVLAVGH  275 (549)
Q Consensus       264 i~ad~VVlAtGh  275 (549)
                      +.+|.+|+|||.
T Consensus       103 ~~~d~lviAtGs  114 (385)
T 3klj_A          103 IKYEKLIIASGS  114 (385)
T ss_dssp             EECSEEEECCCE
T ss_pred             EECCEEEECCCC
T ss_conf             987999998787


No 91 
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, substrate complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.28  E-value=1.3e-12  Score=95.93  Aligned_cols=174  Identities=17%  Similarity=0.146  Sum_probs=84.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC-CCCC-CHHHHHH
Q ss_conf             67766898798799999999996-5990899835888321101000124354236023455413556-5212-4045532
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGA-GTFS-DGKLYSQ  182 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~-~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~gga-g~fs-dgkl~t~  182 (549)
                      ..-.|+||||||+||++|+.|++ .|++|+||||.+.+....       +...+++.+...+...|. ..+. .+.-...
T Consensus        31 ~~~DVlIVGaGpaGL~lA~~Lar~~Gi~v~ViEr~~~~~~~~-------ra~~l~prtleiL~~lGl~d~~~~~~~~~~~  103 (639)
T 2dkh_A           31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELG-------QADGIACRTMEMFEAFEFADSILKEACWIND  103 (639)
T ss_dssp             SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSC-------SCCEECHHHHHHHHHTTCHHHHHHHSEEECE
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC-------CEEEECHHHHHHHHHCCCHHHHHHHCCCCCE
T ss_conf             868999999398999999998721799789994899988788-------2899888999999987898999851754530


Q ss_pred             HHHHCCCHHHHHHHHHHCCCCCCC--CCCCCCCEECCHHHHHHHHHHHHHHHCC--CEEEEECCCCCCEECCCEE----E
Q ss_conf             200021178999999966895100--1367641000127999999999999669--8899813433204058758----9
Q T0604           183 VKDPNFYGRKVITEFVEAGAPEEI--LYVSKPHIGTFKLVTMIEKMRATIIELG--GEIRFSTRVDDLHMEDGQI----T  254 (549)
Q Consensus       183 ~~~~~~~~~~vl~~~~~~Ga~~~i--~~~~kph~gtd~~~~vv~~L~~~l~~~G--~~i~~~t~V~~i~~~~g~v----~  254 (549)
                      ............ .....+.....  .....++. ......+.+.|++.+.+.+  +++++++++.++..+.+..    +
T Consensus       104 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ll~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  181 (639)
T 2dkh_A          104 VTFWKPDPGQPG-RIARHGRVQDTEDGLSEFPHV-ILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVT  181 (639)
T ss_dssp             EEEEEECTTSTT-CEEEEEEEESSCTTSCSSCEE-ECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEE
T ss_pred             EEEEECCCCCCC-EEEECCCCCCCCCCCCCCCEE-ECCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCEE
T ss_conf             699936888641-354124334544566668704-225889999999999853775167775786425774045432013


Q ss_pred             -EEEEC------CCCEEEECEEEEECC-CCHHHHHHHHHHCCCCCCC
Q ss_conf             -99986------784897056899318-8767999999966971114
Q T0604           255 -GVTLS------NGEEIKSRHVVLAVG-HSARDTFEMLHERGVYMEA  293 (549)
Q Consensus       255 -gV~t~------~g~~i~ad~VVlAtG-hsard~~~~l~~~Gi~~~~  293 (549)
                       .+...      ..+++.++.||.|+| ||.   .  -+.+|+.+..
T Consensus       182 v~~~~~~~~~~g~~~~i~a~~vVgADG~~S~---V--R~~lgi~~~g  223 (639)
T 2dkh_A          182 VTLERCDAAHAGQIETVQARYVVGCDGARSN---V--RRAIGRQLVG  223 (639)
T ss_dssp             EEEEECSGGGTTCEEEEEEEEEEECCCTTCH---H--HHHTTCCCEE
T ss_pred             EEEEEEECCCCCCEEEEEEEEEECCCCCHHH---H--HHHHCCCCCC
T ss_conf             5777651157896589987889712310035---8--8773245778


No 92 
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A*
Probab=99.26  E-value=8.2e-12  Score=90.83  Aligned_cols=52  Identities=27%  Similarity=0.377  Sum_probs=45.5

Q ss_pred             CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             6777887767766898798799999999996599089983588832110100
Q T0604            98 FVAKAPENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus        98 ~~~~~~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      .+.+.+.+.++||||||||+|||.||..|+++|++|+|||+.+.+|+|....
T Consensus        98 ~~~~~~~~~~~kViVIGAGiaGL~aA~~La~~G~~V~VlEa~~r~GGr~~t~  149 (662)
T 2z3y_A           98 RIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATF  149 (662)
T ss_dssp             CSSCCCSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEE
T ss_pred             CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEE
T ss_conf             7999998999949998988899999999986899889997999884717689


No 93 
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.25  E-value=1.8e-10  Score=82.45  Aligned_cols=38  Identities=29%  Similarity=0.527  Sum_probs=34.4

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             77668987987999999999965990899835888321
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      .-.|||||+||||+.||..|++.|.+|+|+|+.+.+|+
T Consensus         6 ~yDvvIIG~G~aG~~aA~~aa~~g~~v~liek~~~~GG   43 (470)
T 1dxl_A            6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGG   43 (470)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             68989999888999999999978897899973798435


No 94 
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavoprotein, FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.25  E-value=4.1e-11  Score=86.47  Aligned_cols=37  Identities=35%  Similarity=0.439  Sum_probs=33.7

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             7668987987999999999965990899835888321
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      -.||||||||||+.||+.|++.|.+|+|+||.+.+|+
T Consensus         7 YDvvIIGgGpAG~~aA~~a~~~g~~V~liEk~~~~GG   43 (482)
T 1ojt_A            7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGG   43 (482)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSH
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             4689999888999999999978690999975899555


No 95 
>1aog_A Trypanothione reductase; FAD dependent disulphide oxidoreductase; HET: FAD; 2.30A {Trypanosoma cruzi} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1gxf_A* 1bzl_A* 1nda_A* 2wba_A*
Probab=99.25  E-value=1.2e-10  Score=83.57  Aligned_cols=56  Identities=18%  Similarity=0.294  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCC
Q ss_conf             99999999999966988998134332040587589999867848970568993188
Q T0604           220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       220 ~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGh  275 (549)
                      ..+.+.+.+.+++.|+++++++.++.+..+++..+.+++.+|+++++|.|++|+|.
T Consensus       231 ~e~~~~l~~~l~~~gi~i~~~~~v~~i~~~~~g~~~v~~~~g~~i~aD~Vl~A~Gr  286 (485)
T 1aog_A          231 HTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGR  286 (485)
T ss_dssp             HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred             HHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEEECCCCEEECCEEEEEECC
T ss_conf             77877677777625716974572599999589739999829909985899994361


No 96 
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.24  E-value=4.5e-11  Score=86.21  Aligned_cols=112  Identities=13%  Similarity=0.284  Sum_probs=69.3

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHC---CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             77677668987987999999999965---990899835888321101000124354236023455413556521240455
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQM---GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLY  180 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~---G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~  180 (549)
                      .+..+||||||||||||.||..|+++   +++|+|+|+.+...        +.++..     .....    +.       
T Consensus        32 ~~~gkkVVIIGgG~AGl~aA~~l~r~~~~~~~Vtlie~~~~~~--------y~~~~l-----~~~~~----~~-------   87 (490)
T 2bc0_A           32 DRWGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS--------FLGAGM-----ALWIG----EQ-------   87 (490)
T ss_dssp             TCCCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS--------BCGGGH-----HHHHT----TS-------
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC--------CCCCCH-----HHHHC----CC-------
T ss_conf             6899909998978999999999997389988399988999777--------777710-----56653----46-------


Q ss_pred             HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC
Q ss_conf             32200021178999999966895100136764100012799999999999966988998134332040587589999867
Q T0604           181 SQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN  260 (549)
Q Consensus       181 t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~  260 (549)
                                         .-.+.++.+                ...+.+++.+++++.+++|++|..++..++.....+
T Consensus        88 -------------------~~~~~~~~~----------------~~~~~~~~~~i~~~~~~~V~~ID~~~k~V~~~~~g~  132 (490)
T 2bc0_A           88 -------------------IAGPEGLFY----------------SDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGK  132 (490)
T ss_dssp             -------------------SSCSGGGBS----------------CCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTE
T ss_pred             -------------------CCCHHHHHH----------------HHHHHHHHCCCEEEECCEEEEEECCCCEEEEEECCC
T ss_conf             -------------------689899866----------------369999977989993898999988998899996798


Q ss_pred             CCEEEECEEEEECC
Q ss_conf             84897056899318
Q T0604           261 GEEIKSRHVVLAVG  274 (549)
Q Consensus       261 g~~i~ad~VVlAtG  274 (549)
                      +.++++|.+|+|||
T Consensus       133 ~~~i~yD~LVIATG  146 (490)
T 2bc0_A          133 NHVETYDKLIFATG  146 (490)
T ss_dssp             EEEEECSEEEECCC
T ss_pred             EEEEEEEEEEECCC
T ss_conf             79999658886376


No 97 
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.23  E-value=2.6e-10  Score=81.37  Aligned_cols=37  Identities=35%  Similarity=0.599  Sum_probs=34.0

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             7668987987999999999965990899835888321
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      -.|+|||||||||.||+.|++.|++|+|+|+.+.+|+
T Consensus         6 ~DvvIIG~GpAGl~aA~~~~~~G~~v~liEk~~~~GG   42 (478)
T 1v59_A            6 HDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGG   42 (478)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             2389999888999999999978997899973799686


No 98 
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.22  E-value=1.6e-11  Score=88.97  Aligned_cols=51  Identities=27%  Similarity=0.405  Sum_probs=45.5

Q ss_pred             CCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             777887767766898798799999999996599089983588832110100
Q T0604            99 VAKAPENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus        99 ~~~~~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      +.+.+..+.+||||||||+|||.||+.|.++|++|+|||..+.+|+|....
T Consensus       270 ~~~~~~~k~kkVvVIGAGiAGLsAA~~L~~~G~~VtVLEArdRvGGRi~T~  320 (852)
T 2xag_A          270 IKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATF  320 (852)
T ss_dssp             SSCCCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEE
T ss_pred             CCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf             899998999978998978899999999986899989993899873507789


No 99 
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis}
Probab=99.21  E-value=2.1e-10  Score=81.96  Aligned_cols=134  Identities=18%  Similarity=0.190  Sum_probs=67.6

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             66898798799999999996599089983588832110100012435423602345541355652124045532200021
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPNF  188 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~~  188 (549)
                      .||||||||||+.||+.|++.|.+|+|+|++. +|+.         |  +|.-|-+.            |......+   
T Consensus         5 DvvIIG~GpAG~~aA~~a~~~g~~v~liEk~~-~GGt---------c--~n~GCiPs------------K~ll~~a~---   57 (464)
T 2a8x_A            5 DVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGV---------C--LNVGCIPS------------KALLRNAE---   57 (464)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHH---------H--HHHSHHHH------------HHHHHHHH---
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCC-CCCE---------E--EEECHHHH------------HHHHHHHH---
T ss_conf             88998988899999999996879099996899-7985---------1--10683647------------99999999---


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHH----HHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCC--C
Q ss_conf             1789999999668951001367641000127999----999999999669889981343320405875899998678--4
Q T0604           189 YGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTM----IEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG--E  262 (549)
Q Consensus       189 ~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~v----v~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g--~  262 (549)
                      ......+.+..+|...+...+..  ....+...+    ...........++++..+...   ..+++.+. |.+.+|  +
T Consensus        58 ~~~~~~~~~~~~gi~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~---~~~~~~v~-V~~~~g~~~  131 (464)
T 2a8x_A           58 LVHIFTKDAKAFGISGEVTFDYG--IAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGT---FADANTLL-VDLNDGGTE  131 (464)
T ss_dssp             HHHHHHHHTTTTTEEECCEECHH--HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEE---ESSSSEEE-EEETTSCCE
T ss_pred             HHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE---ECCCCEEE-EEECCCCEE
T ss_conf             99999878986796744556899--9999999999987666788874178379973687---43798899-991799569


Q ss_pred             EEEECEEEEECCC
Q ss_conf             8970568993188
Q T0604           263 EIKSRHVVLAVGH  275 (549)
Q Consensus       263 ~i~ad~VVlAtGh  275 (549)
                      ++.++.+|+|+|.
T Consensus       132 ~~~~~~~iiatG~  144 (464)
T 2a8x_A          132 SVTFDNAIIATGS  144 (464)
T ss_dssp             EEEEEEEEECCCE
T ss_pred             EEEEEEEEEECCC
T ss_conf             9997446750455


No 100
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unknown function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.21  E-value=2.6e-10  Score=81.42  Aligned_cols=37  Identities=24%  Similarity=0.414  Sum_probs=31.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHC---CCEEEEEECCCCCC
Q ss_conf             677668987987999999999965---99089983588832
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQM---GFNPIIVERGKEVR  143 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~---G~~V~VlErg~~vg  143 (549)
                      |.-||||||+||||+.||+.+++.   |.+|+|+|+. .+|
T Consensus         1 ~~t~vVIIG~GpaG~~AA~~aa~~~~~g~~V~lIEk~-~~G   40 (499)
T 1xdi_A            1 MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCD-GIG   40 (499)
T ss_dssp             -CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESS-CTT
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC-CCC
T ss_conf             9888899878889999999998568688989999359-966


No 101
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, FAD, NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.20  E-value=3.8e-10  Score=80.37  Aligned_cols=105  Identities=18%  Similarity=0.212  Sum_probs=66.1

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             766898798799999999996599--089983588832110100012435423602345541355652124045532200
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      .+|||||+|||||.||..|++.|.  +|+|+|+++..-        +.++..       ..      .+..++       
T Consensus         5 ~~vvIIG~G~AGl~aA~~l~~~~~~~~V~li~~~~~~~--------y~~~~l-------~~------~~~~~~-------   56 (384)
T 2v3a_A            5 APLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRS--------YSKPML-------ST------GFSKNK-------   56 (384)
T ss_dssp             CCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCE--------ECGGGG-------GG------TTTTTC-------
T ss_pred             CCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC--------CCCCCC-------HH------HHCCCC-------
T ss_conf             99999978899999999998069798499996988887--------755656-------58------874888-------


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEE
Q ss_conf             02117899999996689510013676410001279999999999996698899813433204058758999986784897
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIK  265 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~  265 (549)
                         .....             ..     .   .       .....++.+++++.+.+|++|..+...   |.+.++ ++.
T Consensus        57 ---~~~~~-------------~~-----~---~-------~~~~~~~~~~~~~~~~~V~~Id~~~~~---V~~~~~-~i~  101 (384)
T 2v3a_A           57 ---DADGL-------------AM-----A---E-------PGAMAEQLNARILTHTRVTGIDPGHQR---IWIGEE-EVR  101 (384)
T ss_dssp             ---CHHHH-------------EE-----E---C-------HHHHHHHTTCEEECSCCCCEEEGGGTE---EEETTE-EEE
T ss_pred             ---CHHHH-------------HC-----C---C-------HHHHHHHCCCEEEECCEEEEEECCCCE---EECCCC-EEE
T ss_conf             ---86883-------------20-----6---9-------999998569599968989999788858---953893-553


Q ss_pred             ECEEEEECCC
Q ss_conf             0568993188
Q T0604           266 SRHVVLAVGH  275 (549)
Q Consensus       266 ad~VVlAtGh  275 (549)
                      +|.+|+|||.
T Consensus       102 ~d~lviAtG~  111 (384)
T 2v3a_A          102 YRDLVLAWGA  111 (384)
T ss_dssp             CSEEEECCCE
T ss_pred             CCEEEECCCC
T ss_conf             1489993388


No 102
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.19  E-value=5e-11  Score=85.89  Aligned_cols=36  Identities=28%  Similarity=0.526  Sum_probs=32.7

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             767766898798799999999996599089983588
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .+.-.+||||+||||+.||..|++.|.+|+|+|++.
T Consensus         3 ~~~~divIIG~G~AG~~aA~~a~~~g~~v~liEk~~   38 (458)
T 1lvl_A            3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA   38 (458)
T ss_dssp             CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             652899999679899999999997889799994899


No 103
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* 2grt_A* 4grt_A* ...
Probab=99.19  E-value=3.7e-10  Score=80.47  Aligned_cols=36  Identities=28%  Similarity=0.332  Sum_probs=31.7

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             7668987987999999999965990899835888321
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      -.|||||+|||||+||+.|++.|++|+|||++ .+|+
T Consensus        21 yDvvIIG~GpAGl~aA~~l~~~g~~V~viEk~-~~GG   56 (478)
T 3dk9_A           21 YDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGG   56 (478)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTH
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CCCC
T ss_conf             37799887989999999999689959999689-9787


No 104
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus HB8} PDB: 2cvj_A*
Probab=99.17  E-value=6.6e-10  Score=78.87  Aligned_cols=107  Identities=21%  Similarity=0.293  Sum_probs=64.9

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             66898798799999999996599089983588832110100012435423602345541355652124045532200021
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPNF  188 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~~  188 (549)
                      .|||||||||||+||+.|+++|++|+|||+++.........         ..  .        ..+.+            
T Consensus         3 DVvIIGaG~aGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~---------~~--~--------~~~~~------------   51 (180)
T 2ywl_A            3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRV---------PN--Y--------PGLLD------------   51 (180)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCC---------CC--S--------TTCTT------------
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC---------CC--C--------CCCCC------------
T ss_conf             39999982999999999998899889997888533442222---------35--5--------55434------------


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECE
Q ss_conf             17899999996689510013676410001279999999999996698899813433204058758999986784897056
Q T0604           189 YGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRH  268 (549)
Q Consensus       189 ~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~  268 (549)
                                                 ......+.+..++...+....+.....+. .....+... +.+ .+.++.++.
T Consensus        52 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~-~~~~~~~~~  101 (180)
T 2ywl_A           52 ---------------------------EPSGEELLRRLEAHARRYGAEVRPGVVKG-VRDMGGVFE-VET-EEGVEKAER  101 (180)
T ss_dssp             ---------------------------CCCHHHHHHHHHHHHHHTTCEEEECCCCE-EEECSSSEE-EEC-SSCEEEEEE
T ss_pred             ---------------------------CCCHHHHHHHHHHHHHHCCCCCCCCCEEE-EEECCCCEE-EEE-CCCEEEEEE
T ss_conf             ---------------------------56418899998876652153112342033-210012179-981-277075308


Q ss_pred             EEEECCCC
Q ss_conf             89931887
Q T0604           269 VVLAVGHS  276 (549)
Q Consensus       269 VVlAtGhs  276 (549)
                      ||+|+|..
T Consensus       102 viiatG~~  109 (180)
T 2ywl_A          102 LLLCTHKD  109 (180)
T ss_dssp             EEECCTTC
T ss_pred             EEEECCCC
T ss_conf             99961798


No 105
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.17  E-value=5.1e-10  Score=79.57  Aligned_cols=154  Identities=16%  Similarity=0.162  Sum_probs=77.8

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHH---------------HHHHHHC--
Q ss_conf             67766898798799999999996599089983588832110100012435423602---------------3455413--
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPE---------------SNVQFGE--  168 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~---------------~n~~~g~--  168 (549)
                      ..++|+|||||.+|+++|+.|+++|++|+||||.....+......+....+...+.               +...+..  
T Consensus         5 ~~~~V~IIGaGi~G~s~A~~La~~G~~V~vlE~~~~~~gaS~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (363)
T 1c0p_A            5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVELV   84 (363)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99978999958999999999997899489990788877654123777415774223358858999999999999999986


Q ss_pred             CCC-CCCCCHHHHHHHHHHCCCHHHHHHHH-HHCCC-----CCCCCC----CCCCCEECCHHHHHHHHHHHHHHHCCCEE
Q ss_conf             556-52124045532200021178999999-96689-----510013----67641000127999999999999669889
Q T0604           169 GGA-GTFSDGKLYSQVKDPNFYGRKVITEF-VEAGA-----PEEILY----VSKPHIGTFKLVTMIEKMRATIIELGGEI  237 (549)
Q Consensus       169 gga-g~fsdgkl~t~~~~~~~~~~~vl~~~-~~~Ga-----~~~i~~----~~kph~gtd~~~~vv~~L~~~l~~~G~~i  237 (549)
                      ... .....+.+.......     ...... .....     +.....    ...+..+.......+..+.+.+++.|+.+
T Consensus        85 ~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~p~~~~~~l~~~~~~~G~~~  159 (363)
T 1c0p_A           85 PTGHAMWLKGTRRFAQNED-----GLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATF  159 (363)
T ss_dssp             TTTSSEEEEEEEEEESSGG-----GGGGGTTTTTSTTCEECCGGGSSTTCEEEEEEEEECCHHHHHHHHHHHHHHTTCEE
T ss_pred             HHCCCCCCCCEEEEECCHH-----HHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEE
T ss_conf             1265421144579952545-----65555555544554213355402222455652279868999999999999749889


Q ss_pred             EEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHH
Q ss_conf             98134332040587589999867848970568993188767
Q T0604           238 RFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR  278 (549)
Q Consensus       238 ~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsar  278 (549)
                      +..+.+.....              ...++.||.|+|..+.
T Consensus       160 ~~~~~~~~~~~--------------~~~~~~vv~~~g~~~~  186 (363)
T 1c0p_A          160 ERRTVTSLEQA--------------FDGADLVVNATGLGAK  186 (363)
T ss_dssp             EECCCSBGGGT--------------CSSCSEEEECCGGGGG
T ss_pred             EEEEEEEECCC--------------CCEEEEEEECCCCCHH
T ss_conf             99677530102--------------2104799966871366


No 106
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.17  E-value=5e-10  Score=79.62  Aligned_cols=116  Identities=18%  Similarity=0.298  Sum_probs=67.7

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             87767766898798799999999996599089983588832110100012435423602345541355652124045532
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQ  182 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~  182 (549)
                      |.+..-.|||||||||||+||+.|++.|++|+|+||+... ++.....     ...+                       
T Consensus         4 ~~~~~yDVvIIGaG~AGl~aA~~l~~~g~~v~lid~~~~g-g~~~~~~-----~~~~-----------------------   54 (325)
T 2q7v_A            4 PTAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPG-GQIAWSE-----EVEN-----------------------   54 (325)
T ss_dssp             CCCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT-GGGGGCS-----CBCC-----------------------
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC-CEEECCC-----CCCC-----------------------
T ss_conf             9887799999998799999999999789978999279968-7781365-----1267-----------------------


Q ss_pred             HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEE--CCCEEEEEEECC
Q ss_conf             200021178999999966895100136764100012799999999999966988998134332040--587589999867
Q T0604           183 VKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM--EDGQITGVTLSN  260 (549)
Q Consensus       183 ~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~--~~g~v~gV~t~~  260 (549)
                                               +.+.|+.  ..........+........++..+ .++.+..  .+.....+...+
T Consensus        55 -------------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~~~~~~~~~~  106 (325)
T 2q7v_A           55 -------------------------FPGFPEP--IAGMELAQRMHQQAEKFGAKVEMD-EVQGVQHDATSHPYPFTVRGY  106 (325)
T ss_dssp             -------------------------STTCSSC--BCHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSSSCCEEEEES
T ss_pred             -------------------------CCCCCCC--CCHHHHHHHHHHHHHHHCCCEECC-CEEEEEEEECCCCCEEEEECC
T ss_conf             -------------------------5877412--470999999998666404411002-057899751366522588449


Q ss_pred             CCEEEECEEEEECCC
Q ss_conf             848970568993188
Q T0604           261 GEEIKSRHVVLAVGH  275 (549)
Q Consensus       261 g~~i~ad~VVlAtGh  275 (549)
                      +.++.+|+||+|||.
T Consensus       107 ~~~~~~d~lviAtG~  121 (325)
T 2q7v_A          107 NGEYRAKAVILATGA  121 (325)
T ss_dssp             SCEEEEEEEEECCCE
T ss_pred             CEEEEECEEEEEECC
T ss_conf             819994989998589


No 107
>3itj_A Thioredoxin reductase 1; cytoplasm, disulfide bond, FAD, flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-active center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae W303} PDB: 3d8x_A*
Probab=99.17  E-value=1.1e-10  Score=83.65  Aligned_cols=120  Identities=20%  Similarity=0.360  Sum_probs=71.4

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ..+..+|+|||||||||+||+.|++.|++|+|+|+....+....        +.+.....                   +
T Consensus        19 ~~~~~kVvIIGgGpAGlsAA~~la~~G~~v~liE~~~~~~~~~g--------G~l~~~~~-------------------i   71 (338)
T 3itj_A           19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG--------GQLTTTTE-------------------I   71 (338)
T ss_dssp             --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT--------CGGGGSSE-------------------E
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC--------CEECCCCC-------------------C
T ss_conf             77899999988769999999999988998899945776788646--------78473431-------------------1


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCE--EEEEEECCC
Q ss_conf             000211789999999668951001367641000127999999999999669889981343320405875--899998678
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQ--ITGVTLSNG  261 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~--v~gV~t~~g  261 (549)
                      .+  +           .|.+.           ......+.+.+++.+...+..... ..+.........  +..+...++
T Consensus        72 ~~--~-----------~g~~~-----------~~~~~el~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~  126 (338)
T 3itj_A           72 EN--F-----------PGFPD-----------GLTGSELMDRMREQSTKFGTEIIT-ETVSKVDLSSKPFKLWTEFNEDA  126 (338)
T ss_dssp             CC--S-----------TTCTT-----------CEEHHHHHHHHHHHHHHTTCEEEC-SCEEEEECSSSSEEEEETTCSSS
T ss_pred             CC--C-----------CCCCC-----------CCCHHHHHHHHHHHHHHHCCCCCE-EEEEEEEECCCCCEEEEEECCCC
T ss_conf             33--5-----------77877-----------788799999999878752861001-48999851145514788980797


Q ss_pred             CEEEECEEEEECCC
Q ss_conf             48970568993188
Q T0604           262 EEIKSRHVVLAVGH  275 (549)
Q Consensus       262 ~~i~ad~VVlAtGh  275 (549)
                      +.+.++.+++|+|.
T Consensus       127 ~~~~~~~i~ia~g~  140 (338)
T 3itj_A          127 EPVTTDAIILATGA  140 (338)
T ss_dssp             CCEEEEEEEECCCE
T ss_pred             EEEEEEEEEEECCC
T ss_conf             69999888760465


No 108
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.17  E-value=1.2e-09  Score=77.17  Aligned_cols=38  Identities=34%  Similarity=0.489  Sum_probs=33.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             77668987987999999999965990899835888321
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      +-.||||||||||+.||+.|++.|.+|+|+|+......
T Consensus         3 kyDvvIIG~G~aG~~aA~~a~~~g~~V~liek~~~~~~   40 (476)
T 3lad_A            3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEG   40 (476)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTS
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             15599989888999999999978893999950577666


No 109
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, alternative splicing, FAD, mitochondrion, NADP, redox-active center, selenium; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.16  E-value=9.3e-10  Score=77.92  Aligned_cols=142  Identities=15%  Similarity=0.050  Sum_probs=71.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      -.|||||+||||+.||..|++.|.+|+|+|+.+....-.+.   .+....+|.-|.+..            .......  
T Consensus         7 yDvvIIG~GpaG~~aA~~aa~~g~kValiE~~~~~~~~~~~---~~GGtCln~GCiPsK------------~l~~~a~--   69 (488)
T 3dgz_A            7 FDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKW---GLGGTCVNVGCIPKK------------LMHQAAL--   69 (488)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCC---CTTCHHHHHSHHHHH------------HHHHHHH--
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC---CEECCCCCCCHHHHH------------HHHHHHH--
T ss_conf             46899997889999999999687949999602545667658---885621343808789------------9999999--


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCEECC----HHHHHH----HHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEEC
Q ss_conf             117899999996689510013676410001----279999----999999996698899813433204058758999986
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKPHIGTF----KLVTMI----EKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS  259 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd----~~~~vv----~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~  259 (549)
                        .....+.+..+|....    ........    +...++    ...+..++..++.+....-   .......+. +...
T Consensus        70 --~~~~~~~~~~~g~~~~----~~~~~d~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~a---~~~~~~~~~-v~~~  139 (488)
T 3dgz_A           70 --LGGMIRDAHHYGWEVA----QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKA---SFVDEHTVR-GVDK  139 (488)
T ss_dssp             --HHHHHHHHHHTTCCCC----SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEE---EESSSSEEE-EECT
T ss_pred             --HHHHHHHHHHCCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE---EEEECCEEE-EECC
T ss_conf             --9999987885592147----76646899999999999998767889999865950643249---981034036-7738


Q ss_pred             CCC--EEEECEEEEECCCC
Q ss_conf             784--89705689931887
Q T0604           260 NGE--EIKSRHVVLAVGHS  276 (549)
Q Consensus       260 ~g~--~i~ad~VVlAtGhs  276 (549)
                      +++  .+.++.+|+|||.+
T Consensus       140 ~~~~~~~~~~~iiiATGs~  158 (488)
T 3dgz_A          140 GGKATLLSAEHIVIATGGR  158 (488)
T ss_dssp             TSCEEEEEEEEEEECCCEE
T ss_pred             CCCEEEEECCCEEEECCCC
T ss_conf             9946888416479905788


No 110
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, disulphide bond, oxidoreductase; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus PY2} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A*
Probab=99.16  E-value=2.1e-10  Score=81.96  Aligned_cols=43  Identities=28%  Similarity=0.318  Sum_probs=37.3

Q ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             8877677668987987999999999965990899835888321
Q T0604           102 APENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       102 ~~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      -+.+..-.||||||||||+.||+.|++.|.+|+|+|+++.+|+
T Consensus        38 ~~~~k~YDvvIIG~GpAG~~aA~~~a~~G~kv~lIEk~~~lGG   80 (523)
T 1mo9_A           38 ENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGG   80 (523)
T ss_dssp             TTCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSC
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             9999811989999788999999999977998899976799786


No 111
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.16  E-value=3.9e-10  Score=80.33  Aligned_cols=35  Identities=40%  Similarity=0.510  Sum_probs=32.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             77668987987999999999965990899835888
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .-.|||||+|+||+.+|..|+++|++|+|||+|..
T Consensus        11 ~~DvIIVGsG~aG~v~A~~La~aG~~VlvLEaG~~   45 (507)
T 1coy_A           11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS   45 (507)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             18889978768999999999668296999978889


No 112
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossmann fold, 6-hydroxylated FAD; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.15  E-value=6.7e-09  Score=72.54  Aligned_cols=51  Identities=18%  Similarity=0.205  Sum_probs=38.8

Q ss_pred             HHHHHHHHH-CCCEEEEECCCCCCEECCCEEEEEEECCC--------CEEEECEEEEECC
Q ss_conf             999999996-69889981343320405875899998678--------4897056899318
Q T0604           224 EKMRATIIE-LGGEIRFSTRVDDLHMEDGQITGVTLSNG--------EEIKSRHVVLAVG  274 (549)
Q Consensus       224 ~~L~~~l~~-~G~~i~~~t~V~~i~~~~g~v~gV~t~~g--------~~i~ad~VVlAtG  274 (549)
                      ..+...+.+ .+.+|+.++.|+.|..++++.++|.+...        ..+.++.||||.|
T Consensus       199 ~~~~~~a~~~~~~~i~~~~~V~ri~~d~~~~~gv~~~~~~~~~~~~~~~~~a~~VVlaAG  258 (546)
T 1kdg_A          199 ATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAG  258 (546)
T ss_dssp             HTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSH
T ss_pred             HHHHHHHHCCCCEEEEECCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEEEEECCC
T ss_conf             321125652896389833688898724861267886320122324899996105884376


No 113
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A*
Probab=99.15  E-value=2.4e-09  Score=75.35  Aligned_cols=109  Identities=20%  Similarity=0.292  Sum_probs=62.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             67766898798799999999996599--0899835888321101000124354236023455413556521240455322
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      .+.+|||||+|+||+.||..|.+.|.  +|+|+++.+...-        .+...    + ..        +..+..    
T Consensus         3 ~~~~VVIIG~G~AGl~aA~~Lr~~~~~~~I~li~~e~~~~y--------~r~~L----s-~~--------~l~g~~----   57 (431)
T 1q1r_A            3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPH--------HLPPL----S-KA--------YLAGKA----   57 (431)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCB--------CSGGG----G-TT--------TTTTCS----
T ss_pred             CCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC--------CCCCC----H-HH--------HHCCCC----
T ss_conf             99999998987999999999970595996999948756777--------76643----0-99--------856998----


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCE
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867848
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE  263 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~  263 (549)
                                        ...++..         .       ..+..++.+++++.+++|+.|..+...   |.+.+|++
T Consensus        58 ------------------~~~~i~~---------~-------~~~~~~~~~i~~~~g~~V~~Id~~~k~---V~~~~g~~  100 (431)
T 1q1r_A           58 ------------------TAESLYL---------R-------TPDAYAAQNIQLLGGTQVTAINRDRQQ---VILSDGRA  100 (431)
T ss_dssp             ------------------CSGGGBS---------S-------CHHHHHHTTEEEECSCCEEEEETTTTE---EEETTSCE
T ss_pred             ------------------CHHHHCC---------C-------CHHHHHHCCCEEEECCEEEEEECCCCE---EEECCCEE
T ss_conf             ------------------8899545---------8-------899998789799918889998379888---99899819


Q ss_pred             EEECEEEEECCCC
Q ss_conf             9705689931887
Q T0604           264 IKSRHVVLAVGHS  276 (549)
Q Consensus       264 i~ad~VVlAtGhs  276 (549)
                      +..|.+|+|||.+
T Consensus       101 i~yd~LviAtG~~  113 (431)
T 1q1r_A          101 LDYDRLVLATGGR  113 (431)
T ss_dssp             EECSEEEECCCEE
T ss_pred             EECCEEEEECCCC
T ss_conf             9734389812773


No 114
>3dme_A Conserved exported protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.15  E-value=5.7e-10  Score=79.26  Aligned_cols=174  Identities=15%  Similarity=0.105  Sum_probs=89.3

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC-CCCCCCCCCCCCC-CHHHH---------HHHH----CCCCC
Q ss_conf             76689879879999999999659908998358883211-0100012435423-60234---------5541----35565
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRER-TKDTFGFWRKRTL-NPESN---------VQFG----EGGAG  172 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r-~~~~~~~~~~~~~-~~~~n---------~~~g----~ggag  172 (549)
                      -.|||||||.+|+++|+.|+++|++|+||||+..++.. +....+....+.. .+...         ..+.    .....
T Consensus         5 ~DVvIIGaGi~G~s~A~~La~~G~~V~lie~~~~~~~gaS~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (369)
T 3dme_A            5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVP   84 (369)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             88999991199999999999788949999789998663024634571777678956899999999999999887623754


Q ss_pred             CCCCHHHHHH-HHHHCCCHHHHHHHHHHCCCCCC-----------------CCCCCCCCEECCHHHHHHHHHHHHHHHCC
Q ss_conf             2124045532-20002117899999996689510-----------------01367641000127999999999999669
Q T0604           173 TFSDGKLYSQ-VKDPNFYGRKVITEFVEAGAPEE-----------------ILYVSKPHIGTFKLVTMIEKMRATIIELG  234 (549)
Q Consensus       173 ~fsdgkl~t~-~~~~~~~~~~vl~~~~~~Ga~~~-----------------i~~~~kph~gtd~~~~vv~~L~~~l~~~G  234 (549)
                      ....+.+... ..................+....                 ......+.-+.......+..+...+...+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~  164 (369)
T 3dme_A           85 HQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDG  164 (369)
T ss_dssp             EECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCEEECCHHHHHHHHHHHHHCC
T ss_conf             20056401233167778999999988863874200102344320256422251798168758701675445566676446


Q ss_pred             CEEEEECCCCCCEECCCEEEEEEECCC--CEEEECEEEEECCCCHHHHH
Q ss_conf             889981343320405875899998678--48970568993188767999
Q T0604           235 GEIRFSTRVDDLHMEDGQITGVTLSNG--EEIKSRHVVLAVGHSARDTF  281 (549)
Q Consensus       235 ~~i~~~t~V~~i~~~~g~v~gV~t~~g--~~i~ad~VVlAtGhsard~~  281 (549)
                      ..+..+++|+.+...+.....+.....  ....++.||.++|..+....
T Consensus       165 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~  213 (369)
T 3dme_A          165 AQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLA  213 (369)
T ss_dssp             CEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHH
T ss_pred             CEEEEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHH
T ss_conf             3488754566799834884488863033322100001010124178899


No 115
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreductase, structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.14  E-value=6.8e-10  Score=78.79  Aligned_cols=111  Identities=23%  Similarity=0.396  Sum_probs=68.5

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .+.|+|||||||||.||+.|++.|++|+|+|+.+..++ ..      ...     +.+.+  .+   +.           
T Consensus        14 ~~dVvIIGgGpAGlsaA~~l~~~g~~v~lie~~~~gG~-~~------~~~-----~i~~~--~~---~~-----------   65 (335)
T 2a87_A           14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGA-LM------TTT-----DVENY--PG---FR-----------   65 (335)
T ss_dssp             CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCG-GG------SCS-----CBCCS--TT---CT-----------
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCE-EE------ECC-----CCCCC--CC---CC-----------
T ss_conf             88799989879999999999988996899867985865-56------516-----72885--66---64-----------


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEE
Q ss_conf             21178999999966895100136764100012799999999999966988998134332040587589999867848970
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKS  266 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~a  266 (549)
                                               ..   .....+.+.++...............+...  .++....+.+.++.++.+
T Consensus        66 -------------------------~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~  115 (335)
T 2a87_A           66 -------------------------NG---ITGPELMDEMREQALRFGADLRMEDVESVS--LHGPLKSVVTADGQTHRA  115 (335)
T ss_dssp             -------------------------TC---BCHHHHHHHHHHHHHHTTCEEECCCEEEEE--CSSSSEEEEETTSCEEEE
T ss_pred             -------------------------CC---CCHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCEEEECCCCCEEEE
T ss_conf             -------------------------45---788999988888765420000011100110--256621367489858998


Q ss_pred             CEEEEECCC
Q ss_conf             568993188
Q T0604           267 RHVVLAVGH  275 (549)
Q Consensus       267 d~VVlAtGh  275 (549)
                      +.+|+|+|.
T Consensus       116 ~~liiatG~  124 (335)
T 2a87_A          116 RAVILAMGA  124 (335)
T ss_dssp             EEEEECCCE
T ss_pred             EEEEECCCC
T ss_conf             788850466


No 116
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.14  E-value=4.2e-10  Score=80.13  Aligned_cols=58  Identities=19%  Similarity=0.251  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCCCCCEEC-CCEEEEEEECCCCEEEECEEEEECCC
Q ss_conf             27999999999999669889981343320405-87589999867848970568993188
Q T0604           218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       218 ~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~-~g~v~gV~t~~g~~i~ad~VVlAtGh  275 (549)
                      ....+.+.|++.+...++..+...+|+++..+ +|.+..+++.+|.++++|.+|-|+|-
T Consensus       192 DA~~~~~~l~~~~~~~~~v~~~~~~v~~v~~d~~G~i~~l~~~~g~~i~aD~~IDcSGf  250 (550)
T 2e4g_A          192 DAHLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGF  250 (550)
T ss_dssp             CHHHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEECCEECCCCCC
T ss_conf             79998789987543316531358758887607988768998357844542321056652


No 117
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.13  E-value=4e-11  Score=86.51  Aligned_cols=44  Identities=27%  Similarity=0.362  Sum_probs=40.4

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
Q ss_conf             76776689879879999999999659908998358883211010
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKD  148 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~  148 (549)
                      ...|||||||||+|||.||+.|+++|++|+|||+.+.+|+|...
T Consensus        11 ~~~kkVvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~s   54 (504)
T 1sez_A           11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRS   54 (504)
T ss_dssp             --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEE
T ss_conf             99891899897889999999998689999999289988074689


No 118
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics, protein structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.13  E-value=1.3e-10  Score=83.33  Aligned_cols=107  Identities=18%  Similarity=0.256  Sum_probs=64.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             76689879879999999999659--9089983588832110100012435423602345541355652124045532200
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      +||||||+|||||.||..|++.|  ++|+|+|+++.....        .++.       .       .+..+.       
T Consensus         4 KkVvIIGgG~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~--------~~~~-------~-------~~~~g~-------   54 (449)
T 3kd9_A            4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA--------PCGI-------P-------YVVEGL-------   54 (449)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------------------------
T ss_pred             CEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC--------CCCC-------H-------HHCCCC-------
T ss_conf             8099989889999999999806989838999388767888--------8842-------4-------222676-------


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCC-EE
Q ss_conf             02117899999996689510013676410001279999999999996698899813433204058758999986784-89
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGE-EI  264 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~-~i  264 (549)
                         ..            +.++.               .......+++.|++++++++|+++..+  .. -|.+.+|+ ++
T Consensus        55 ---~~------------~~~~~---------------~~~~~~~~~~~~i~~~~~~~v~~Id~~--~~-~v~~~~g~~~i  101 (449)
T 3kd9_A           55 ---ST------------PDKLM---------------YYPPEVFIKKRGIDLHLNAEVIEVDTG--YV-RVRENGGEKSY  101 (449)
T ss_dssp             -----------------------------------------CTHHHHTTCEEETTCEEEEECSS--EE-EEECSSSEEEE
T ss_pred             ---CC------------HHHHH---------------HCCHHHHHHHCCCEEEECCEEEEEECC--CE-EEEEECCCCEE
T ss_conf             ---89------------89985---------------508999998769399968889999688--37-99640342100


Q ss_pred             EECEEEEECCCC
Q ss_conf             705689931887
Q T0604           265 KSRHVVLAVGHS  276 (549)
Q Consensus       265 ~ad~VVlAtGhs  276 (549)
                      .+|.+|+|+|.+
T Consensus       102 ~~d~lviatG~~  113 (449)
T 3kd9_A          102 EWDYLVFANGAS  113 (449)
T ss_dssp             ECSEEEECCCEE
T ss_pred             CCCCCCCCCCCC
T ss_conf             012111233567


No 119
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.13  E-value=3.4e-11  Score=86.98  Aligned_cols=46  Identities=28%  Similarity=0.406  Sum_probs=40.8

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCCCCCCC
Q ss_conf             7767766898798799999999996599-089983588832110100
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEVRERTKDT  149 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~vg~r~~~~  149 (549)
                      .+.++||||||||+|||.||+.|+++|+ +|+|||+.+.+|+|....
T Consensus         5 ~~~~~~VvIIGaG~aGLsaA~~L~~~G~~~V~VlEa~~~~GGr~~T~   51 (516)
T 1rsg_A            5 SPAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTV   51 (516)
T ss_dssp             -CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEE
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEE
T ss_conf             98979889989688999999999867999789997899880665268


No 120
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.13  E-value=6.3e-11  Score=85.25  Aligned_cols=47  Identities=21%  Similarity=0.363  Sum_probs=41.9

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             87767766898798799999999996599089983588832110100
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      ....+++|||||||+|||.||+.|+++|++|+|||+.+.+|+|....
T Consensus         7 ~~~~~~dV~IIGaG~aGL~aA~~La~~G~~V~VlEa~~~~GGr~~t~   53 (489)
T 2jae_A            7 KVKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTA   53 (489)
T ss_dssp             CCCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEE
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf             88898958998978899999999985899899990899885656799


No 121
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.13  E-value=5.9e-10  Score=79.18  Aligned_cols=57  Identities=14%  Similarity=0.223  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCCCCCEE-CCCEEEEEEECCCCEEEECEEEEECCC
Q ss_conf             2799999999999966988998134332040-587589999867848970568993188
Q T0604           218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       218 ~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~-~~g~v~gV~t~~g~~i~ad~VVlAtGh  275 (549)
                      ....+...|++.+...++..... .+.++.. ++|.+..+.+.++..+.+|.+|-|+|-
T Consensus       163 Da~~~~~~L~~~a~~~~v~~i~~-~v~~v~~~~~G~i~~~~~~~~~~i~aD~fIDcSGf  220 (538)
T 2aqj_A          163 DAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGM  220 (538)
T ss_dssp             CHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGG
T ss_pred             CHHHHHHHHHHCCCCCCCCCCCE-EEEEEEECCCCCEECCCCCCCCEEEHHHHHHCCCC
T ss_conf             69987567552210034555540-79988855788550223564204421111000455


No 122
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae}
Probab=99.13  E-value=5.6e-11  Score=85.60  Aligned_cols=43  Identities=23%  Similarity=0.340  Sum_probs=38.9

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
Q ss_conf             6776689879879999999999659908998358883211010
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKD  148 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~  148 (549)
                      |+..|+|||||||||+||+.|+++|++|+||||.+.+|++...
T Consensus         1 Mt~dV~IIGaGpaGL~~A~~La~~G~~V~viEk~~~~GG~~~t   43 (336)
T 1yvv_A            1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS   43 (336)
T ss_dssp             -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf             9997999893899999999999789978999698999975544


No 123
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.13  E-value=4.3e-10  Score=80.03  Aligned_cols=108  Identities=17%  Similarity=0.153  Sum_probs=67.2

Q ss_pred             CEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             6689879879999999999659--90899835888321101000124354236023455413556521240455322000
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      |||||||||||+.||..|++.|  .+|+|+|+++....        ..++.       .....  +.+.         + 
T Consensus         2 KVvIIGgG~AGl~aA~~l~~~~~~~~V~lie~~~~~~~--------~~~~~-------~~~~~--~~~~---------~-   54 (447)
T 1nhp_A            2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF--------LSAGM-------QLYLE--GKVK---------D-   54 (447)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB--------CGGGH-------HHHHT--TSSC---------C-
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCC--------CCCHH-------HHHHC--CCCC---------C-
T ss_conf             79999978999999999980696883899918986687--------77745-------66533--6668---------9-


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEEC--CCCEE
Q ss_conf             2117899999996689510013676410001279999999999996698899813433204058758999986--78489
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS--NGEEI  264 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~--~g~~i  264 (549)
                                      ...+.+                ...+.+++.|++++.+++|+.|..+...+....+.  +++++
T Consensus        55 ----------------~~~~~~----------------~~~~~~~~~~i~~~~~~~V~~Id~~~~~v~~~~~~~~~~~~~  102 (447)
T 1nhp_A           55 ----------------VNSVRY----------------MTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVE  102 (447)
T ss_dssp             ----------------GGGSBS----------------CCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred             ----------------HHHHHH----------------HHHHHHHHCCCEEECCCEEEEEECCCCEEEEEECCCCCEEEE
T ss_conf             ----------------799743----------------249999977999984887999987788899997137966999


Q ss_pred             EECEEEEECCC
Q ss_conf             70568993188
Q T0604           265 KSRHVVLAVGH  275 (549)
Q Consensus       265 ~ad~VVlAtGh  275 (549)
                      .+|++|+|||.
T Consensus       103 ~yd~lViATGs  113 (447)
T 1nhp_A          103 NYDKLIISPGA  113 (447)
T ss_dssp             ECSEEEECCCE
T ss_pred             ECCEEEECCCC
T ss_conf             86979987875


No 124
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.12  E-value=1.6e-10  Score=82.71  Aligned_cols=39  Identities=26%  Similarity=0.405  Sum_probs=34.5

Q ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             887767766898798799999999996599089983588
Q T0604           102 APENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       102 ~~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      ....|++||+|||||||||++|+.|+++|++|+|+|+..
T Consensus        17 ~~~~m~~rIaIVGAGpaGL~lA~~Lar~G~~V~vve~r~   55 (430)
T 3ihm_A           17 RGSHMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK   55 (430)
T ss_dssp             ------CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             998999998999918899999999985899889997278


No 125
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ binding, reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori 26695} PDB: 2q0k_A* 3ish_A*
Probab=99.11  E-value=1.3e-09  Score=76.99  Aligned_cols=111  Identities=17%  Similarity=0.273  Sum_probs=71.5

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      ..|+|||||||||+||+.|++.|++++|+|....+|++......+     .    +          |             
T Consensus         2 ~DV~IIGaGpAGlsaA~~l~~~g~~~~li~~~~~~GG~~~~~~~i-----~----~----------~-------------   49 (311)
T 2q0l_A            2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEI-----E----N----------Y-------------   49 (311)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCB-----C----C----------S-------------
T ss_pred             EEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCC-----C----C----------C-------------
T ss_conf             399998988999999999997899729999469848666325521-----6----7----------5-------------


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEEC
Q ss_conf             11789999999668951001367641000127999999999999669889981343320405875899998678489705
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSR  267 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad  267 (549)
                                  .|.+.           ......+.+.++......+............. +.... .+.+..+.++.++
T Consensus        50 ------------~g~~~-----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~  104 (311)
T 2q0l_A           50 ------------PGVKE-----------VVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSK-KDSHF-VILAEDGKTFEAK  104 (311)
T ss_dssp             ------------TTCCS-----------CBCHHHHHHHHHHHHHTTSCEEECSCEEEEEE-ETTEE-EEEETTSCEEEEE
T ss_pred             ------------CCCCC-----------CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEC-CCCCE-EEEEECCCEEEEE
T ss_conf             ------------88734-----------37769999999875542001111025787520-57750-4674068499830


Q ss_pred             EEEEECCC
Q ss_conf             68993188
Q T0604           268 HVVLAVGH  275 (549)
Q Consensus       268 ~VVlAtGh  275 (549)
                      .+|+|+|.
T Consensus       105 ~~i~a~g~  112 (311)
T 2q0l_A          105 SVIIATGG  112 (311)
T ss_dssp             EEEECCCE
T ss_pred             EEEEECCC
T ss_conf             79991157


No 126
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate- methylating enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A*
Probab=99.11  E-value=1.2e-09  Score=77.28  Aligned_cols=40  Identities=25%  Similarity=0.400  Sum_probs=37.0

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
Q ss_conf             6689879879999999999659908998358883211010
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKD  148 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~  148 (549)
                      .|+|||||||||.||+.|++.|++|+|+|+.+.+|+....
T Consensus       130 DVvIIGgGpaGlsAA~~aa~~G~~VlLvEe~~~~GG~l~~  169 (965)
T 2gag_A          130 DVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD  169 (965)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf             8999994099999999999788968999689989866446


No 127
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.11  E-value=2.1e-09  Score=75.74  Aligned_cols=38  Identities=26%  Similarity=0.283  Sum_probs=32.9

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             677668987987999999999965990899835888321
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      |.-.||||||||||+.||+.|++.|.+|+|+|++ .+|+
T Consensus         1 m~YDvvIIG~GpAGl~aA~~~~~~g~~V~liEk~-~~GG   38 (500)
T 1onf_A            1 MVYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGG   38 (500)
T ss_dssp             -CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTH
T ss_pred             CEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CCCC
T ss_conf             9578999898889999999999688939999579-9787


No 128
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesis; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A*
Probab=99.11  E-value=7.9e-11  Score=84.66  Aligned_cols=44  Identities=20%  Similarity=0.394  Sum_probs=40.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             67766898798799999999996599089983588832110100
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      .+++|+|||||+|||.||+.|+++|++|+|||+.+.+|++..+.
T Consensus         2 ~~kkv~IIGaG~sGL~aA~~L~~~g~~V~l~Ek~~~~GG~~~t~   45 (384)
T 2bi7_A            2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDA   45 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEE
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf             96879998960999999999986899689997799266845799


No 129
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.11  E-value=8.2e-11  Score=84.56  Aligned_cols=105  Identities=17%  Similarity=0.256  Sum_probs=67.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             6776689879879999999999659--90899835888321101000124354236023455413556521240455322
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      |.++|||||||+|||.||..|++.+  ++|+|+|+.+...         ..     + ..+...   .|.++        
T Consensus         1 M~K~VvIIGgG~AGl~aA~~L~~~~~~~~VtlI~~~~~~~---------~~-----p-~l~~~~---~g~~~--------   54 (430)
T 3h28_A            1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG---------FT-----P-AFPHLA---MGWRK--------   54 (430)
T ss_dssp             -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE---------CG-----G-GHHHHH---HTCSC--------
T ss_pred             CCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC---------CC-----C-CHHHHH---CCCCC--------
T ss_conf             9997899898899999999996369668599992888776---------67-----6-678986---18887--------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCE
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867848
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE  263 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~  263 (549)
                                         +.++...                +++.+.+.|++++.+ +|+.|..++..   |++.+|++
T Consensus        55 -------------------~~~i~~~----------------~~~~~~~~~v~~i~~-~v~~ID~~~~~---V~~~~g~~   95 (430)
T 3h28_A           55 -------------------FEDISVP----------------LAPLLPKFNIEFINE-KAESIDPDANT---VTTQSGKK   95 (430)
T ss_dssp             -------------------GGGSEEE----------------STTTGGGGTEEEECS-CEEEEETTTTE---EEETTCCE
T ss_pred             -------------------HHHHHHH----------------HHHHHHHCCCEEEEE-EEEEEECCCCE---EEECCCCE
T ss_conf             -------------------8997536----------------999998789499984-79999888998---99789969


Q ss_pred             EEECEEEEECCC
Q ss_conf             970568993188
Q T0604           264 IKSRHVVLAVGH  275 (549)
Q Consensus       264 i~ad~VVlAtGh  275 (549)
                      +++|++|+|||.
T Consensus        96 i~yD~LviAtGs  107 (430)
T 3h28_A           96 IEYDYLVIATGP  107 (430)
T ss_dssp             EECSEEEECCCC
T ss_pred             EECCEEEEECCC
T ss_conf             983379980576


No 130
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.10  E-value=1.7e-09  Score=76.25  Aligned_cols=132  Identities=17%  Similarity=0.177  Sum_probs=68.1

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             67766898798799999999996599--0899835888321101000124354236023455413556521240455322
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+|||||||||||.||..|++.|.  +|+|||+.+..-        ..++..    +.. +..+.....   ......
T Consensus        10 ~h~~VVIIGgG~AGlsaA~~Lr~~~~~~~Itli~~e~~~~--------Y~r~~L----sk~-~~~~~~~~~---~~~~~~   73 (493)
T 1m6i_A           10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP--------YMRPPL----SKE-LWFSDDPNV---TKTLRF   73 (493)
T ss_dssp             SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC--------BCSGGG----GTG-GGCC--CTH---HHHCEE
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC--------CCCCCC----CHH-HHCCCCCCC---CCCCCC
T ss_conf             8699999888699999999999519599789996988765--------457742----087-750645321---112232


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCE
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867848
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE  263 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~  263 (549)
                      ...             ......+......+....       .....+++.+++++.+++|+.|..++..   |++.+|++
T Consensus        74 ~~~-------------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~I~~~~g~~V~~ID~~~k~---V~~~dG~~  130 (493)
T 1m6i_A           74 KQW-------------NGKERSIYFQPPSFYVSA-------QDLPHIENGGVAVLTGKKVVQLDVRDNM---VKLNDGSQ  130 (493)
T ss_dssp             ECT-------------TSCEEESBSSCGGGSBCT-------TTTTTSTTCEEEEEETCCEEEEEGGGTE---EEETTSCE
T ss_pred             CCC-------------CCCCCCCCCCCHHHHHHH-------HHHHHHHHCCEEEEECCEEEEEECCCCE---EEECCCCE
T ss_conf             335-------------653100014718888766-------7888987189399908869999689998---99899969


Q ss_pred             EEECEEEEECCCC
Q ss_conf             9705689931887
Q T0604           264 IKSRHVVLAVGHS  276 (549)
Q Consensus       264 i~ad~VVlAtGhs  276 (549)
                      +.+|.+|+|||.+
T Consensus       131 i~yD~LVIAtGs~  143 (493)
T 1m6i_A          131 ITYEKCLIATGGT  143 (493)
T ss_dssp             EEEEEEEECCCEE
T ss_pred             EECCEEEEEECCC
T ss_conf             9834799942266


No 131
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.10  E-value=1.1e-09  Score=77.60  Aligned_cols=105  Identities=15%  Similarity=0.203  Sum_probs=63.9

Q ss_pred             CCEEEECCCHHHHHHHHHHHHC---CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             7668987987999999999965---9908998358883211010001243542360234554135565212404553220
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQM---GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~---G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      +||||||||+|||.||..|++.   +++|+|+|+.+....         ....      +   +-..+....        
T Consensus         2 kkVvIIG~G~aGl~aA~~L~~~~~~~~~Vtlie~~~~~~~---------~p~~------~---~v~~g~~~~--------   55 (409)
T 3h8l_A            2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYF---------RPAL------P---HVAIGVRDV--------   55 (409)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEE---------CCSS------C---CCCSSCCCC--------
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC---------CCCH------H---HHHCCCCCH--------
T ss_conf             8099989869999999999831899897999978986545---------6756------6---773087788--------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCC--C
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678--4
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG--E  262 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g--~  262 (549)
                                         .++.         ..       +++.+.+.++++..+ +|+.|..++..+. +...++  .
T Consensus        56 -------------------~~~~---------~~-------~~~~~~~~~i~~i~~-~v~~Id~~~~~v~-~~~~~g~~~   98 (409)
T 3h8l_A           56 -------------------DELK---------VD-------LSEALPEKGIQFQEG-TVEKIDAKSSMVY-YTKPDGSMA   98 (409)
T ss_dssp             -------------------CCEE---------EE-------HHHHTGGGTCEEEEC-EEEEEETTTTEEE-EECTTSCEE
T ss_pred             -------------------HHHH---------HC-------HHHHHHHCCCEEEEE-EEEEEECCCCEEE-EEEECCCCE
T ss_conf             -------------------9950---------18-------999998789899987-7999962236035-433147733


Q ss_pred             EEEECEEEEECCC
Q ss_conf             8970568993188
Q T0604           263 EIKSRHVVLAVGH  275 (549)
Q Consensus       263 ~i~ad~VVlAtGh  275 (549)
                      ++..|.+|+|+|.
T Consensus        99 ~i~yD~lviAtG~  111 (409)
T 3h8l_A           99 EEEYDYVIVGIGA  111 (409)
T ss_dssp             EEECSEEEECCCC
T ss_pred             EEECCHHHCCCCC
T ss_conf             8962453104799


No 132
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, class I; coenzyme A, flavin adenine dinucleotide, selenomethionine, FAD, flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.08  E-value=7.3e-10  Score=78.60  Aligned_cols=36  Identities=19%  Similarity=0.340  Sum_probs=30.9

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCC
Q ss_conf             776689879879999999999659--908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~v  142 (549)
                      .-+|||||||||||.||..|++.|  .+|+|+|++...
T Consensus        36 ~ydvVIIGgG~AGl~aA~~l~~~g~~~~V~lie~~~~~   73 (480)
T 3cgb_A           36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY   73 (480)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf             99999999779999999999827999809999698856


No 133
>3kpk_A Sulfide-quinone reductase, putative; oxidoreductases, sulfide:quinone oxidoreductase, C160A mutant, oxidoreductase; HET: FAD LMT; 2.05A {Acidithiobacillus ferrooxidans ATCC23270} PDB: 3kpg_A* 3kpi_A*
Probab=99.08  E-value=3.5e-10  Score=80.57  Aligned_cols=104  Identities=17%  Similarity=0.259  Sum_probs=68.1

Q ss_pred             CCEEEECCCHHHHHHHHHHHHC---CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             7668987987999999999965---9908998358883211010001243542360234554135565212404553220
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQM---GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~---G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      +||||||||+||+.||..|++.   |++|+|+|+.+...-              .+ ..+....   +..          
T Consensus         2 ~kVvIIG~G~AGl~aA~~L~~~l~~~~~VtlId~~~~~~~--------------~p-~~~~v~~---g~~----------   53 (434)
T 3kpk_A            2 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF--------------VP-SNPWVGV---GWK----------   53 (434)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHHHCTTSEEEEECSSSEEEC--------------GG-GHHHHHH---TSS----------
T ss_pred             CCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC--------------CC-CHHHHHC---CCC----------
T ss_conf             9689989899999999999854799783999989887676--------------67-6778741---878----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                          .             +                ..+...+++.+.+.+++++.+ +|+.|..++..   |++.+|+++
T Consensus        54 ----~-------------~----------------~~i~~~~~~~~~~~~v~~i~~-~V~~Id~~~~~---V~l~~g~~i   96 (434)
T 3kpk_A           54 ----E-------------R----------------DDIAFPIRHYVERKGIHFIAQ-SAEQIDAEAQN---ITLADGNTV   96 (434)
T ss_dssp             ----C-------------H----------------HHHEEECHHHHHTTTCEEECC-CEEEEETTTTE---EEETTSCEE
T ss_pred             ----C-------------H----------------HHHHHCHHHHHHHCCCEEEEE-EEEEEECCCCE---EEECCCCEE
T ss_conf             ----8-------------9----------------997526999998789799985-79999889999---998899799


Q ss_pred             EECEEEEECCCC
Q ss_conf             705689931887
Q T0604           265 KSRHVVLAVGHS  276 (549)
Q Consensus       265 ~ad~VVlAtGhs  276 (549)
                      +.|++|+|||.+
T Consensus        97 ~yD~LViAtGs~  108 (434)
T 3kpk_A           97 HYDYLMIATGPK  108 (434)
T ss_dssp             ECSEEEECCCEE
T ss_pred             ECCEEEECCCCC
T ss_conf             867699887896


No 134
>2v6o_A Thioredoxin glutathione reductase; FAD, flavoprotein, oxidoreductase, chimeric enzyme, thiol-mediated detoxification pathway; HET: FAD PG4; 2.20A {Schistosoma mansoni} PDB: 3h4k_A*
Probab=99.05  E-value=4.7e-09  Score=73.51  Aligned_cols=145  Identities=17%  Similarity=0.111  Sum_probs=71.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             76689879879999999999659908998358883211010001243542360234554135565212404553220002
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN  187 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~~  187 (549)
                      -.|||||+|||||+||+.+++.|.+|+|+|+.........  ..++ ...+|.-|-+.            |+..+...  
T Consensus       108 YDvvVIGgGpAGlsAA~~aar~G~kV~viE~~~~~~~~~~--~~lG-GtCln~GCIPs------------K~l~~aa~--  170 (596)
T 2v6o_A          108 YDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTT--WGLG-GTCVNVGCIPK------------KLMHQAGL--  170 (596)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCC--CCTT-CHHHHHSHHHH------------HHHHHHHH--
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC--CCCC-CEEEEECHHHH------------HHHHHHHH--
T ss_conf             8789989788899999999985996579832455665666--8766-54111571747------------99999999--


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCE-ECCHHHHH----HHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCC-
Q ss_conf             117899999996689510013676410-00127999----999999999669889981343320405875899998678-
Q T0604           188 FYGRKVITEFVEAGAPEEILYVSKPHI-GTFKLVTM----IEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG-  261 (549)
Q Consensus       188 ~~~~~vl~~~~~~Ga~~~i~~~~kph~-gtd~~~~v----v~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g-  261 (549)
                        ..+.++....+|..........-.. -..+....    ...+...+++.++++..+...   ......+. +...++ 
T Consensus       171 --~~~~~~~~~~~G~~~~~~~~~~~~~~l~~~~~~~v~~l~~~~~~~l~~~~V~~~~g~~~---~~~~~~~~-~~~~~~~  244 (596)
T 2v6o_A          171 --LSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGR---LISPHEVQ-ITDKNQK  244 (596)
T ss_dssp             --HHHHHHHHHHTTCCCCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEE---ESSSSEEE-EECTTCC
T ss_pred             --HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE---ECCCCCCE-ECCCCCC
T ss_conf             --99999878766965457543677999999999999988788999988679289996899---73787530-0157753


Q ss_pred             -CEEEECEEEEECCC
Q ss_conf             -48970568993188
Q T0604           262 -EEIKSRHVVLAVGH  275 (549)
Q Consensus       262 -~~i~ad~VVlAtGh  275 (549)
                       +++.++.+|+|||.
T Consensus       245 ~~~i~a~~vIiATGa  259 (596)
T 2v6o_A          245 VSTITGNKIILATGE  259 (596)
T ss_dssp             EEEEEEEEEEECCCE
T ss_pred             EEEEEEEEEEECCCC
T ss_conf             499995448987899


No 135
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.04  E-value=2.7e-09  Score=74.98  Aligned_cols=35  Identities=26%  Similarity=0.307  Sum_probs=31.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             766898798799999999996599089983588832
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      -.|||||+||||+.||..|++.|.+|+|+|++ .+|
T Consensus        12 YDvvIIG~G~aG~~aA~~a~~~g~~V~iiE~~-~~G   46 (479)
T 2hqm_A           12 YDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALG   46 (479)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTT
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECC-CCC
T ss_conf             36899898889999999999687929999489-978


No 136
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.04  E-value=6.5e-09  Score=72.63  Aligned_cols=108  Identities=22%  Similarity=0.242  Sum_probs=70.9

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             87767766898798799999999996599--0899835888321101000124354236023455413556521240455
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLY  180 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~  180 (549)
                      .+.|+.+|||||||+||+.||..|.+.|.  +|+|+++.+..-        +.++.                 ++..   
T Consensus         3 ~~~mk~~VVIIGgG~AGl~aA~~Lr~~~~~~~Itli~~e~~~~--------y~rp~-----------------Ls~~---   54 (408)
T 2gqw_A            3 QEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP--------YDRPP-----------------LSKD---   54 (408)
T ss_dssp             ---CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC--------BCSGG-----------------GGTH---
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC--------CCCCC-----------------CHHH---
T ss_conf             4468899999898799999999997519598199997988877--------75661-----------------7399---


Q ss_pred             HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC
Q ss_conf             32200021178999999966895100136764100012799999999999966988998134332040587589999867
Q T0604           181 SQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN  260 (549)
Q Consensus       181 t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~  260 (549)
                                  ++    ......++...                +   .+..+++++.+++|+.|..++..   |++.+
T Consensus        55 ------------~~----~~~~~~~~~~~----------------~---~~~~~i~~~~~~~V~~Id~~~~~---V~~~~   96 (408)
T 2gqw_A           55 ------------FM----AHGDAEKIRLD----------------C---KRAPEVEWLLGVTAQSFDPQAHT---VALSD   96 (408)
T ss_dssp             ------------HH----HHCCGGGSBCC----------------C---TTSCSCEEEETCCEEEEETTTTE---EEETT
T ss_pred             ------------HH----CCCCHHHHCHH----------------H---HHHCCCEEEECCEEEEEECCCCE---EEECC
T ss_conf             ------------86----69996893443----------------7---98689699968989999899888---99889


Q ss_pred             CCEEEECEEEEECCCC
Q ss_conf             8489705689931887
Q T0604           261 GEEIKSRHVVLAVGHS  276 (549)
Q Consensus       261 g~~i~ad~VVlAtGhs  276 (549)
                      |+++..|++|+|+|.+
T Consensus        97 G~~~~yD~LviAtGs~  112 (408)
T 2gqw_A           97 GRTLPYGTLVLATGAA  112 (408)
T ss_dssp             SCEEECSEEEECCCEE
T ss_pred             CCEEEEEEEEECCCCC
T ss_conf             8299930688735443


No 137
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii OT3}
Probab=99.02  E-value=7.6e-10  Score=78.49  Aligned_cols=106  Identities=23%  Similarity=0.254  Sum_probs=64.9

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .-.|+|||+|||||.||+.+++ |.+|+|+|....+|++...      .+.                ..+ .+       
T Consensus       108 ~~DVlIIGaGPAGl~AA~~a~~-g~~vvLvde~~~~GG~l~~------~~~----------------~~~-~~-------  156 (493)
T 1y56_A          108 VVDVAIIGGGPAGIGAALELQQ-YLTVALIEERGWLGGDMWL------KGI----------------KQE-GF-------  156 (493)
T ss_dssp             EESCCEECCSHHHHHHHHHHTT-TCCEEEECTTSSSSCSGGG------TCS----------------EET-TT-------
T ss_pred             HHHHHHCCCCHHHHHHHHHHHH-CCCEEEEEECCCCCCCCEE------CCC----------------CCC-CC-------
T ss_conf             5544411764377799999986-7987898302456785031------035----------------545-66-------


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCC---E
Q ss_conf             2117899999996689510013676410001279999999999996698899813433204058758999986784---8
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGE---E  263 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~---~  263 (549)
                      ..                             ........+..++ +.+++++.++.|..+..++.... +....++   +
T Consensus       157 ~~-----------------------------~~~~~~~~l~~~~-~~~v~i~~~t~v~g~~d~~~~~~-v~~~~~~~~~~  205 (493)
T 1y56_A          157 NK-----------------------------DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFL-VPVVRGDKLIE  205 (493)
T ss_dssp             TE-----------------------------EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEE-EEEEETTEEEE
T ss_pred             CC-----------------------------CHHHHHHHHHHHH-HCCEEEEECCEEEEEEECCCEEE-EEEECCCCEEE
T ss_conf             64-----------------------------1467899999886-47849997333567751474478-98852761389


Q ss_pred             EEECEEEEECC
Q ss_conf             97056899318
Q T0604           264 IKSRHVVLAVG  274 (549)
Q Consensus       264 i~ad~VVlAtG  274 (549)
                      |.++.||||||
T Consensus       206 I~ak~VIlATG  216 (493)
T 1y56_A          206 ILAKRVVLATG  216 (493)
T ss_dssp             EEESCEEECCC
T ss_pred             EEEEEEEECCC
T ss_conf             96406998134


No 138
>1yqz_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.54A {Staphylococcus aureus}
Probab=99.00  E-value=2.2e-09  Score=75.65  Aligned_cols=35  Identities=17%  Similarity=0.321  Sum_probs=30.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCC
Q ss_conf             766898798799999999996599--08998358883
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKEV  142 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~v  142 (549)
                      .||||||||||||.||..|++.|.  +|+|+|+.+..
T Consensus         2 ~kVvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~   38 (438)
T 1yqz_A            2 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM   38 (438)
T ss_dssp             CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred             CCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCC
T ss_conf             9799988979999999999806989968999589986


No 139
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic resolution; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.99  E-value=5e-09  Score=73.34  Aligned_cols=33  Identities=27%  Similarity=0.467  Sum_probs=31.3

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             668987987999999999965990899835888
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .|||||+|+||+.+|..|++.|++|+|||+|..
T Consensus         7 dvIVVGsG~aG~v~A~~La~~g~~VLvLEaG~~   39 (504)
T 1n4w_A            7 PAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL   39 (504)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             699979688999999999868692999957899


No 140
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiation, alternative splicing; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.99  E-value=2.1e-09  Score=75.75  Aligned_cols=143  Identities=17%  Similarity=0.087  Sum_probs=70.5

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .-.||||||||||+.||+.|++.|.+|+|+|+......-.. ... .....+|.-|.+..            ....... 
T Consensus         9 ~yDvvIIG~GpAG~~AA~~a~~~G~~V~liE~~~~~~~~~~-~~~-lGGtCln~GCiPsK------------~l~~aa~-   73 (483)
T 3dgh_A            9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGT-KWG-VGGTCVNVGCIPKK------------LMHQASL-   73 (483)
T ss_dssp             SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTC-CCC-SSCHHHHHSHHHHH------------HHHHHHH-
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC-CCC-CCCCCCCCCHHHHH------------HHHHHHH-
T ss_conf             88889989688999999999978894999952566555465-587-73334427878789------------9999999-


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECC----HHH----HHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEE
Q ss_conf             2117899999996689510013676410001----279----99999999999669889981343320405875899998
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTF----KLV----TMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL  258 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd----~~~----~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t  258 (549)
                         .....+.+..+|....    .++.+-..    ...    .+....+..+...++++..+.-.   ...+..+. +.+
T Consensus        74 ---~~~~~~~~~~~G~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~---~~~~~~~~-v~~  142 (483)
T 3dgh_A           74 ---LGEAVHEAAAYGWNVD----DKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGS---FVDSHTLL-AKL  142 (483)
T ss_dssp             ---HHHHHHHHHHTTBCCC----CCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEE---EEETTEEE-EEC
T ss_pred             ---HHHHHHHHHHCCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE---EEECCEEE-EEE
T ss_conf             ---9999988886493438----752566999999999999766667888875174345310699---97424167-773


Q ss_pred             CC-CCEEEECEEEEECCC
Q ss_conf             67-848970568993188
Q T0604           259 SN-GEEIKSRHVVLAVGH  275 (549)
Q Consensus       259 ~~-g~~i~ad~VVlAtGh  275 (549)
                      .. ...+.++.+|+|||.
T Consensus       143 ~~~~~~~~~~~~iIATGs  160 (483)
T 3dgh_A          143 KSGERTITAQTFVIAVGG  160 (483)
T ss_dssp             TTCCEEEEEEEEEECCCE
T ss_pred             CCCCEEEEEEEEEECCCC
T ss_conf             367489983228984788


No 141
>2f5v_A Pyranose 2-oxidase; flavoprotein, rossmann-fold, PHBH-fold, GMC oxidoreductase, glutathion-reductase related fold, tetramer; HET: KBG FAD PG4; 1.41A {Peniophora SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1tzl_A* 1tt0_A* 2igk_A* 3k4b_A* 3bg6_A* 2f6c_A* 3k4m_A* 3bg7_A* 2igm_A* 3k4j_A* 2ign_A* 2igo_A* 3k4k_A* 3k4l_A* 3bly_A* 3k4c_A* 3fdy_A* 3k4n_A*
Probab=98.98  E-value=1.6e-08  Score=70.21  Aligned_cols=37  Identities=19%  Similarity=0.397  Sum_probs=33.3

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7677668987987999999999965990899835888
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ...-.+||||+|+||+.+|..|++.|++|+|||+|+.
T Consensus        16 ~~~yD~IVVGsG~aG~v~A~rLae~g~~VLvLEaG~~   52 (595)
T 2f5v_A           16 DIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEI   52 (595)
T ss_dssp             CSEEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             9812789989658999999999748897999955779


No 142
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.98  E-value=2.5e-09  Score=75.29  Aligned_cols=37  Identities=24%  Similarity=0.405  Sum_probs=33.9

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             7668987987999999999965990899835888321
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      -.|||||+|||||+||+.|++.|++|+|+|+.+.+|+
T Consensus         5 YDvvIIG~GpAGl~aA~~~~~~g~~V~liE~~~~~GG   41 (466)
T 3l8k_A            5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGG   41 (466)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSH
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             8589989898999999999968996899963899677


No 143
>1xhc_A NADH oxidase /nitrite reductase; southeast collaboratory for structural genomics, secsg, hyperthermophIle; HET: FAD; 2.35A {Pyrococcus furiosus dsm 3638} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.96  E-value=5.4e-10  Score=79.40  Aligned_cols=107  Identities=20%  Similarity=0.268  Sum_probs=65.7

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      .-.+||||||||||||.||..|++ +.+|+|+|+.+....        .++. +   ....     .+.           
T Consensus         6 ~~gkkVvIIG~G~AGl~aA~~l~~-~~~VtlIe~~~~~~~--------~~~~-l---~~~~-----~g~-----------   56 (367)
T 1xhc_A            6 HHGSKVVIVGNGPGGFELAKQLSQ-TYEVTVIDKEPVPYY--------SKPM-L---SHYI-----AGF-----------   56 (367)
T ss_dssp             ---CEEEEECCSHHHHHHHHHHTT-TSEEEEECSSSSCCC--------CSTT-H---HHHH-----TTS-----------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHC-CCCEEEEECCCCCCC--------CCCC-C---HHHH-----CCC-----------
T ss_conf             998979999988999999999727-998899969886678--------7663-3---7986-----668-----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                                       .+.+....               ...+.+++.|++++.++.|+.+..+.. +   ++.++.++
T Consensus        57 -----------------~~~~~~~~---------------~~~~~~~~~gi~~~~~~~v~~id~~~~-~---v~~~~~~i  100 (367)
T 1xhc_A           57 -----------------IPRNRLFP---------------YSLDWYRKRGIEIRLAEEAKLIDRGRK-V---VITEKGEV  100 (367)
T ss_dssp             -----------------SCGGGGCS---------------SCHHHHHHHTEEEECSCCEEEEETTTT-E---EEESSCEE
T ss_pred             -----------------CCHHHHHH---------------HHHHHHHHCCCEEEECCEEEEECCCCC-C---CCCCCCCC
T ss_conf             -----------------88899756---------------349999977959998855531013532-1---01268742


Q ss_pred             EECEEEEECCCC
Q ss_conf             705689931887
Q T0604           265 KSRHVVLAVGHS  276 (549)
Q Consensus       265 ~ad~VVlAtGhs  276 (549)
                      .+|.+|+|+|.+
T Consensus       101 ~yd~lviAtG~~  112 (367)
T 1xhc_A          101 PYDTLVLATGAR  112 (367)
T ss_dssp             ECSEEEECCCEE
T ss_pred             CCCCCCCCCCCC
T ss_conf             011123343221


No 144
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A*
Probab=98.96  E-value=7.2e-10  Score=78.64  Aligned_cols=44  Identities=23%  Similarity=0.267  Sum_probs=39.1

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
Q ss_conf             76776689879879999999999659908998358883211010
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKD  148 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~  148 (549)
                      +..-.|||||||||||.||+.|+++|++|+|||+.+.+|++.++
T Consensus        27 ~~~yDviIIGaG~sGL~aA~~L~k~G~~V~v~Ek~~~iGG~~~t   70 (397)
T 3hdq_A           27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD   70 (397)
T ss_dssp             CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEE
T ss_conf             78899999997289999999999689947999788976061688


No 145
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} SCOP: c.3.1.6 PDB: 3fpz_A*
Probab=98.95  E-value=2.4e-09  Score=75.30  Aligned_cols=114  Identities=18%  Similarity=0.091  Sum_probs=66.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             677668987987999999999965--990899835888321101000124354236023455413556521240455322
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQM--GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~--G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ....|+|||||||||+||+.|+++  |++|+|+|++..+++.....      +.+               ++...+    
T Consensus        64 ~~~dv~ivg~g~ag~~~a~~~~k~~~~~~v~~~ek~~~~GG~~~~g------g~~---------------~~~~~~----  118 (326)
T 2gjc_A           64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG------GQL---------------FSAMVM----  118 (326)
T ss_dssp             TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC------GGG---------------CCCEEE----
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECC------CEE---------------CCHHHH----
T ss_conf             4899899997789999999999848998599980477785077648------996---------------788899----


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCE
Q ss_conf             000211789999999668951001367641000127999999999999669889981343320405875
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQ  252 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~  252 (549)
                            .......+.++|.+.+....  -....+........+...+...|+++...+.+.++...++.
T Consensus       119 ------~~~~~~~l~~~gv~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Gv~i~~~~~~~d~~~~~~~  179 (326)
T 2gjc_A          119 ------RKPAHLFLQELEIPYEDEGD--YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPT  179 (326)
T ss_dssp             ------ETTTHHHHHHTTCCCEECSS--EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC
T ss_pred             ------HHHHHHHHHHCCCEEEECCC--CCEEEEEEEEECCCCHHHCCCCCCEEEECCCEEEEEECCCC
T ss_conf             ------89999999986977998588--62455678885110522315587247601021778852786


No 146
>2zzc_A Thioredoxin reductase 1, cytoplasmic; rossmann fold, alternative splicing, electron transport, FAD, flavoprotein, NADP, nucleus, oxidoreductase; HET: FAD NAP; 2.60A {Homo sapiens} PDB: 2zzb_A* 2zz0_A* 2j3n_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.94  E-value=1.4e-09  Score=76.81  Aligned_cols=41  Identities=27%  Similarity=0.306  Sum_probs=34.5

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             87767766898798799999999996599089983588832
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      |+...-.||||||||||+.||..|++.|.+|+|+|+.....
T Consensus        22 p~~~dYDvvIIG~GpAG~~AA~~aa~~g~kV~liE~~~~~~   62 (513)
T 2zzc_A           22 PKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTP   62 (513)
T ss_dssp             --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCT
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf             97589998998968899999999996899699995257656


No 147
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.94  E-value=1.1e-09  Score=77.52  Aligned_cols=43  Identities=21%  Similarity=0.236  Sum_probs=37.8

Q ss_pred             CCCEEEECCCHHHHHHHHHHH-HCCCEEEEEECCCCCCCCCCCC
Q ss_conf             776689879879999999999-6599089983588832110100
Q T0604           107 TERPIVIGFGPCGLFAGLVLA-QMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La-~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      +-.|||||||+|||+||+.|+ +.|++|+|+|+.+.+|++..+.
T Consensus         7 k~dvvIIGaG~sGL~aA~~L~~~~g~~V~l~Ek~~~~GG~~~t~   50 (399)
T 1v0j_A            7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE   50 (399)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEE
T ss_pred             CCCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf             79999999509999999999986899779997999772733067


No 148
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2ve2_A*
Probab=98.92  E-value=2.7e-08  Score=68.75  Aligned_cols=36  Identities=28%  Similarity=0.306  Sum_probs=31.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCE-EEEEECCCCC
Q ss_conf             77668987987999999999965990-8998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFN-PIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~-V~VlErg~~v  142 (549)
                      .-.|||||+||||+.||+.+++.|.+ |+|+|+....
T Consensus         3 ~YDvvVIG~GpaG~~aA~~aa~~G~k~V~vie~~~~~   39 (490)
T 1fec_A            3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHH   39 (490)
T ss_dssp             SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSS
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf             1798999978899999999997799889999732455


No 149
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.89  E-value=1.3e-09  Score=77.04  Aligned_cols=42  Identities=14%  Similarity=0.260  Sum_probs=38.3

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             766898798799999999996599089983588832110100
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      ..|||||||+|||+||+.|++.|++|+|+|+.+.+|++..+.
T Consensus         2 ~dviIIGaG~sGl~~A~~L~~~g~~V~v~Ek~~~iGG~~~t~   43 (367)
T 1i8t_A            2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTE   43 (367)
T ss_dssp             EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEE
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf             769998976899999999997899889998899874725777


No 150
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.15A {Colwellia psychrerythraea 34H}
Probab=98.88  E-value=1.2e-08  Score=71.04  Aligned_cols=33  Identities=21%  Similarity=0.246  Sum_probs=30.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             766898798799999999996599089983588
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      -.|||||+|||||.||+.|++.|.+|+|+|++.
T Consensus         9 ~DvvIIG~GpAGl~aA~~aa~~G~kV~liEk~~   41 (492)
T 3ic9_A            9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA   41 (492)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             798998888899999999982959899991699


No 151
>1fcd_A Flavocytochrome C sulfide dehydrogenase (flavin- binding subunit); electron transport(flavocytochrome); HET: FAD HEM; 2.53A {Allochromatium vinosum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.87  E-value=1.7e-08  Score=70.06  Aligned_cols=103  Identities=17%  Similarity=0.176  Sum_probs=66.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             776689879879999999999659--908998358883211010001243542360234554135565212404553220
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      .+||||||||+|||.||..|++.+  .+|+|+|+.+...          .+    +.+....    .+..          
T Consensus         2 ~kkvVIvGgG~aGl~~A~~L~~~~~~~~Itlie~~~~~~----------~~----p~~~~~~----~g~~----------   53 (401)
T 1fcd_A            2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNTDYY----------TC----YLSNEVI----GGDR----------   53 (401)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSCEE----------CS----TTHHHHH----HTSS----------
T ss_pred             CCCEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCCC----------CC----CCHHHHH----CCCC----------
T ss_conf             898999996199999999997009399689991898775----------54----3289996----4888----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                                       -+.++.   .|      .        +.+...|++++.+ +|++|..++..|   .+.+++++
T Consensus        54 -----------------~~~~~~---~~------~--------~~~~~~gv~~i~~-~v~~ID~~~~~V---~~~~~~~~   95 (401)
T 1fcd_A           54 -----------------KLESIK---HG------Y--------DGLRAHGIQVVHD-SATGIDPDKKLV---KTAGGAEF   95 (401)
T ss_dssp             -----------------CGGGGE---EC------S--------HHHHTTTEEEECC-CEEECCTTTTEE---EETTSCEE
T ss_pred             -----------------CHHHHH---CC------H--------HHHHHCCCEEEEE-EEEEEECCCCEE---EECCCCEE
T ss_conf             -----------------999951---48------9--------9998789899943-479998888788---50676445


Q ss_pred             EECEEEEECCC
Q ss_conf             70568993188
Q T0604           265 KSRHVVLAVGH  275 (549)
Q Consensus       265 ~ad~VVlAtGh  275 (549)
                      ..|++|+|||-
T Consensus        96 ~YD~LViAtGs  106 (401)
T 1fcd_A           96 GYDRCVVAPGI  106 (401)
T ss_dssp             ECSEEEECCCE
T ss_pred             EEEEEEECCCC
T ss_conf             50368964776


No 152
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.83  E-value=2.8e-09  Score=74.94  Aligned_cols=42  Identities=21%  Similarity=0.232  Sum_probs=36.8

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCE--EEEEECCCCCCC
Q ss_conf             877677668987987999999999965990--899835888321
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFN--PIIVERGKEVRE  144 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~--V~VlErg~~vg~  144 (549)
                      ++..+.||+|||||||||.||+.|+++|++  |+||||.+.+|+
T Consensus         2 ~~~~~~~IAIIGaGPaGl~aA~~la~~G~~~~V~iiEk~~~~GG   45 (460)
T 1cjc_A            2 TQEQTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFG   45 (460)
T ss_dssp             ----CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCT
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCE
T ss_conf             98769969998977899999999985899985999836999853


No 153
>2yr5_A Pro-enzyme of L-phenylalanine oxidase; amino oxidase, flavoenzyme, oxidoreductase; HET: FAD; 1.25A {Pseudomonas SP} PDB: 2yr4_A* 2yr6_A*
Probab=98.73  E-value=4.2e-09  Score=73.81  Aligned_cols=44  Identities=20%  Similarity=0.157  Sum_probs=38.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC--------EEEEEECCC-----------------CCCCCCCCC
Q ss_conf             67766898798799999999996599--------089983588-----------------832110100
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF--------NPIIVERGK-----------------EVRERTKDT  149 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~--------~V~VlErg~-----------------~vg~r~~~~  149 (549)
                      ...||+|||||+|||+||+.|.+.|+        +|+|||..+                 .+|+|....
T Consensus        55 ~~~rVaIIGAGiAGL~AA~eL~~~G~~~~~~~~~~VtVlEAsd~~~~~~~~~~~~~~~~~RiGGRi~T~  123 (721)
T 2yr5_A           55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAA  123 (721)
T ss_dssp             SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             998699989848999999999876995444677876999346865655322333455677245620238


No 154
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.68  E-value=8.6e-09  Score=71.89  Aligned_cols=37  Identities=19%  Similarity=0.212  Sum_probs=33.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCC-------CEEEEEECCCCCCC
Q ss_conf             76689879879999999999659-------90899835888321
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMG-------FNPIIVERGKEVRE  144 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G-------~~V~VlErg~~vg~  144 (549)
                      .||+|||||||||+||+.|+++|       ++|+||||.+.+++
T Consensus         4 ~kVaIIGaGPAGl~aA~~l~~~g~~~~~~~~~V~ifE~~~~pGG   47 (456)
T 1lqt_A            4 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG   47 (456)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC
T ss_conf             73999997889999999998757854357970899926997888


No 155
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, disulfide oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.63  E-value=1.7e-08  Score=70.03  Aligned_cols=116  Identities=22%  Similarity=0.339  Sum_probs=65.7

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             67766898798799999999996599089983588832110100012435423602345541355652124045532200
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      ...+|+|||||||||+||+.|++.|++|+|||+....+...        ++.+                     .....-
T Consensus         7 ~~~dVvIIGgGpAGlsaA~~l~~~g~~v~vie~~~~~~~~~--------gg~~---------------------~~~~~~   57 (333)
T 1vdc_A            7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAP--------GGQL---------------------TTTTDV   57 (333)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCT--------TCGG---------------------GGCSEE
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC--------CCEE---------------------CCCCCC
T ss_conf             69879999976999999999998899889994367678654--------7675---------------------502431


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEE
Q ss_conf             02117899999996689510013676410001279999999999996698899813433204058758999986784897
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIK  265 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~  265 (549)
                      ...           .|.+       ...    ................+... ....++.+........  .+.+...+.
T Consensus        58 ~~~-----------~g~~-------~~~----~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~--~~~~~~~~~  112 (333)
T 1vdc_A           58 ENF-----------PGFP-------EGI----LGVELTDKFRKQSERFGTTI-FTETVTKVDFSSKPFK--LFTDSKAIL  112 (333)
T ss_dssp             CCS-----------TTCT-------TCE----EHHHHHHHHHHHHHHTTCEE-ECCCCCEEECSSSSEE--EECSSEEEE
T ss_pred             CCC-----------CCCC-------CCC----CCHHHHHHHHHHHHCCCCCC-CCEEEEEEECCCCCCE--EECCCCEEE
T ss_conf             224-----------6674-------012----62889999887553137521-3126999983465311--204773378


Q ss_pred             ECEEEEECCC
Q ss_conf             0568993188
Q T0604           266 SRHVVLAVGH  275 (549)
Q Consensus       266 ad~VVlAtGh  275 (549)
                      ...++++++.
T Consensus       113 ~~~~~~~~~~  122 (333)
T 1vdc_A          113 ADAVILAIGA  122 (333)
T ss_dssp             EEEEEECCCE
T ss_pred             EEEEEEEEEC
T ss_conf             7654321000


No 156
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, structural genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.60  E-value=6.5e-07  Score=60.10  Aligned_cols=109  Identities=18%  Similarity=0.286  Sum_probs=72.7

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             87767766898798799999999996599089983588832110100012435423602345541355652124045532
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQ  182 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~  182 (549)
                      ..-..++|+|||+|..|+.+|..|++.|.+|++++|++.....               ...                   
T Consensus       162 ~~~~~k~vvVIG~G~sg~e~A~~l~~~g~~Vtl~~r~~~~~~~---------------~~~-------------------  207 (369)
T 3d1c_A          162 DNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------DAD-------------------  207 (369)
T ss_dssp             GGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--------------------------------------------
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC---------------CCC-------------------
T ss_conf             0168976799897679999999999609989999768844565---------------545-------------------


Q ss_pred             HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHH-CCCEEEEECCCCCCEECCCEEEEEEECCC
Q ss_conf             20002117899999996689510013676410001279999999999996-69889981343320405875899998678
Q T0604           183 VKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIE-LGGEIRFSTRVDDLHMEDGQITGVTLSNG  261 (549)
Q Consensus       183 ~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~-~G~~i~~~t~V~~i~~~~g~v~gV~t~~g  261 (549)
                         ....                            ..+.+.+.+...+.+ .+++++.++.++.+..+++.+. |.+.+|
T Consensus       208 ---~~~~----------------------------~~~~~~~~~~~~~~~g~~i~~~~~~~v~~i~~~~~~~~-v~~~~g  255 (369)
T 3d1c_A          208 ---PSVR----------------------------LSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYH-ISFDSG  255 (369)
T ss_dssp             ---CTTS----------------------------CCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEE-EEESSS
T ss_pred             ---HHHH----------------------------HHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCEEE-EEECCC
T ss_conf             ---1233----------------------------10778999999998188826861544999992398899-998798


Q ss_pred             CEE-EECEEEEECCCCH
Q ss_conf             489-7056899318876
Q T0604           262 EEI-KSRHVVLAVGHSA  277 (549)
Q Consensus       262 ~~i-~ad~VVlAtGhsa  277 (549)
                      +.. ..+.+|+|+|...
T Consensus       256 ~~~~~~d~vi~atG~~~  272 (369)
T 3d1c_A          256 QSVHTPHEPILATGFDA  272 (369)
T ss_dssp             CCEEESSCCEECCCBCG
T ss_pred             EEEEECCEEEEEEEEEC
T ss_conf             69996689999999858


No 157
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2ve2_A*
Probab=98.60  E-value=1.5e-07  Score=64.17  Aligned_cols=100  Identities=17%  Similarity=0.246  Sum_probs=79.7

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHH---CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             7767766898798799999999996---5990899835888321101000124354236023455413556521240455
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQ---MGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLY  180 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~---~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~  180 (549)
                      ...+++++|||+|+.|+..|..++.   .|.+|+|+|+.+.+..+                            +      
T Consensus       184 ~~~pk~v~IIGgG~iG~E~A~~~~~~~~lG~~Vtlie~~~~iL~~----------------------------~------  229 (490)
T 1fec_A          184 DEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG----------------------------F------  229 (490)
T ss_dssp             SSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT----------------------------S------
T ss_pred             HHCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC----------------------------C------
T ss_conf             437853899931620266889988761378679999851234865----------------------------5------


Q ss_pred             HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC
Q ss_conf             32200021178999999966895100136764100012799999999999966988998134332040587589999867
Q T0604           181 SQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN  260 (549)
Q Consensus       181 t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~  260 (549)
                          |                                  +.+.+.+.+.+.+.|++++++++++.+..+++.+..+...+
T Consensus       230 ----D----------------------------------~~~~~~~~~~l~~~gi~i~~~~~v~~~~~~~~~~~~~~~~~  271 (490)
T 1fec_A          230 ----D----------------------------------SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFES  271 (490)
T ss_dssp             ----C----------------------------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETT
T ss_pred             ----C----------------------------------HHHHHHHHHHHHHCCCEEECCCEEEEEEEECCCCEEEEEEC
T ss_conf             ----9----------------------------------99999999878861921412626789997079715899722


Q ss_pred             CCEEEECEEEEECCC
Q ss_conf             848970568993188
Q T0604           261 GEEIKSRHVVLAVGH  275 (549)
Q Consensus       261 g~~i~ad~VVlAtGh  275 (549)
                      ++++++|.|++|+|.
T Consensus       272 ~~~~~~D~vl~a~Gr  286 (490)
T 1fec_A          272 GAEADYDVVMLAIGR  286 (490)
T ss_dssp             SCEEEESEEEECSCE
T ss_pred             CCCCCCCEEEEECCC
T ss_conf             663346779994475


No 158
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.55  E-value=1.4e-06  Score=57.97  Aligned_cols=98  Identities=13%  Similarity=0.205  Sum_probs=70.1

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ..+++|+|||+|+.|+.+|..+++.|.+|+|+||++.+...                            +          
T Consensus       183 ~~pk~vvIIGgG~ig~E~A~~l~~lG~~Vtlv~~~~~l~~~----------------------------~----------  224 (479)
T 2hqm_A          183 EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK----------------------------F----------  224 (479)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT----------------------------S----------
T ss_pred             HCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCC----------------------------C----------
T ss_conf             26997999899889999999999759979999930655765----------------------------4----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECC--CEEEEEEECCCC
Q ss_conf             002117899999996689510013676410001279999999999996698899813433204058--758999986784
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGE  262 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~--g~v~gV~t~~g~  262 (549)
                                                        -..+...+.+++.+.++.+.+...++.+...+  ..+......+..
T Consensus       225 ----------------------------------d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (479)
T 2hqm_A          225 ----------------------------------DECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKS  270 (479)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCE
T ss_pred             ----------------------------------CHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCCEEEECCCCCE
T ss_conf             ----------------------------------3777888887665214489732148999941431100110266522


Q ss_pred             EEEECEEEEECC
Q ss_conf             897056899318
Q T0604           263 EIKSRHVVLAVG  274 (549)
Q Consensus       263 ~i~ad~VVlAtG  274 (549)
                      .+++|.|++|+|
T Consensus       271 ~~~~D~vl~a~G  282 (479)
T 2hqm_A          271 IDDVDELIWTIG  282 (479)
T ss_dssp             EEEESEEEECSC
T ss_pred             EEEEEEEEEEEE
T ss_conf             565679999802


No 159
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.54  E-value=2e-06  Score=57.01  Aligned_cols=99  Identities=18%  Similarity=0.282  Sum_probs=74.6

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ...++++|||+|..|+.+|..|++.|.+|+++++.+.+...                            +.|        
T Consensus       192 ~~~~~vvViGgG~~g~e~a~~l~~~g~~Vtlv~~~~~~~~~----------------------------~~d--------  235 (490)
T 2bc0_A          192 KDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG----------------------------YYD--------  235 (490)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------------------------TSC--------
T ss_pred             CCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC----------------------------CCC--------
T ss_conf             58856999865000000011112346422222246532233----------------------------465--------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                                                         +.+.+.+.+.+.+.|++++++++|+.+..++. +. +...+++++
T Consensus       236 -----------------------------------~~~~~~~~~~l~~~GI~i~~~~~v~~v~~~~~-~~-~~~~~g~~i  278 (490)
T 2bc0_A          236 -----------------------------------RDLTDLMAKNMEEHGIQLAFGETVKEVAGNGK-VE-KIITDKNEY  278 (490)
T ss_dssp             -----------------------------------HHHHHHHHHHHHTTTCEEEETCCEEEEECSSS-CC-EEEESSCEE
T ss_pred             -----------------------------------CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC-CC-CCCCCCCCC
T ss_conf             -----------------------------------11345667765212220115747889840222-11-112466544


Q ss_pred             EECEEEEECCCC
Q ss_conf             705689931887
Q T0604           265 KSRHVVLAVGHS  276 (549)
Q Consensus       265 ~ad~VVlAtGhs  276 (549)
                      ++|.|++|+|..
T Consensus       279 ~~D~vl~a~G~~  290 (490)
T 2bc0_A          279 DVDMVILAVGFR  290 (490)
T ss_dssp             ECSEEEECCCEE
T ss_pred             CCCCCCCCCCCC
T ss_conf             310002323556


No 160
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, disulphide bond, oxidoreductase; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus PY2} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A*
Probab=98.49  E-value=1.8e-06  Score=57.29  Aligned_cols=102  Identities=18%  Similarity=0.220  Sum_probs=72.6

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ...++|+|||+|+.|+.+|..+++.|.+|+++++.+.....                            +          
T Consensus       212 ~~~k~vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~l~~----------------------------~----------  253 (523)
T 1mo9_A          212 EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI----------------------------K----------  253 (523)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC----------------------------C----------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHC----------------------------C----------
T ss_conf             89988999888676777898765337531110124454320----------------------------0----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCC-EEEEE--EECCC
Q ss_conf             0021178999999966895100136764100012799999999999966988998134332040587-58999--98678
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDG-QITGV--TLSNG  261 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g-~v~gV--~t~~g  261 (549)
                                                        ...+...+...+.+.|+.++.++.++.+..++. ....+  .+.++
T Consensus       254 ----------------------------------~~~~~~~~~~~~~~~gv~i~~~~~~~~~~~~~~g~~~~v~~~~~~~  299 (523)
T 1mo9_A          254 ----------------------------------DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNG  299 (523)
T ss_dssp             ----------------------------------SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTE
T ss_pred             ----------------------------------CCHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCCEEEEEEECCCC
T ss_conf             ----------------------------------1002344432000121379843326898872798479999871898


Q ss_pred             -CEEEECEEEEECCCCHH
Q ss_conf             -48970568993188767
Q T0604           262 -EEIKSRHVVLAVGHSAR  278 (549)
Q Consensus       262 -~~i~ad~VVlAtGhsar  278 (549)
                       .+++||.|++|+|....
T Consensus       300 ~~~i~~D~Vl~a~G~~Pn  317 (523)
T 1mo9_A          300 EMRIETDFVFLGLGEQPR  317 (523)
T ss_dssp             EEEEECSCEEECCCCEEC
T ss_pred             CEEEEEEEEEEEECCCCC
T ss_conf             289997777776155358


No 161
>2v6o_A Thioredoxin glutathione reductase; FAD, flavoprotein, oxidoreductase, chimeric enzyme, thiol-mediated detoxification pathway; HET: FAD PG4; 2.20A {Schistosoma mansoni} PDB: 3h4k_A*
Probab=98.46  E-value=3.7e-06  Score=55.35  Aligned_cols=97  Identities=22%  Similarity=0.263  Sum_probs=67.4

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             67766898798799999999996599089983588832110100012435423602345541355652124045532200
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      .+++|+|||+|..|+.+|..|++.|.+|+|+||.....                                          
T Consensus       285 ~pk~vvVIGgG~iglE~A~~l~~lG~~Vtvi~r~~~L~------------------------------------------  322 (596)
T 2v6o_A          285 FPGKTLVIGASYVALECAGFLASLGGDVTVMVRSILLR------------------------------------------  322 (596)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSST------------------------------------------
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCC------------------------------------------
T ss_conf             69809998998999999999998699689997862244------------------------------------------


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEC------C--CEE--EE
Q ss_conf             0211789999999668951001367641000127999999999999669889981343320405------8--758--99
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME------D--GQI--TG  255 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~------~--g~v--~g  255 (549)
                       .+.                              ..+.+.+.+.+++.|++++.++.++.+...      +  ..+  ..
T Consensus       323 -~~D------------------------------~~~~~~l~~~l~~~GI~i~~~~~v~~~~~~~~~~~e~~~~~~~~~~  371 (596)
T 2v6o_A          323 -GFD------------------------------QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVK  371 (596)
T ss_dssp             -TSC------------------------------HHHHHHHHHHHHTTTEEEETTEEEEEEEEEECCBTTTTBCCEEEEE
T ss_pred             -CCC------------------------------HHHHHHHHHHHHHCCEEEEEEEEEEEEEEEEEEEEEECCCEEEEEE
T ss_conf             -422------------------------------5778889999986391898511421344335789871442068888


Q ss_pred             EEECCCC--EEEECEEEEECCC
Q ss_conf             9986784--8970568993188
Q T0604           256 VTLSNGE--EIKSRHVVLAVGH  275 (549)
Q Consensus       256 V~t~~g~--~i~ad~VVlAtGh  275 (549)
                      ....+|+  ++++|.|++|+|.
T Consensus       372 ~~~~~G~~~~i~~D~V~vaiG~  393 (596)
T 2v6o_A          372 GHYTDGKKFEEEFETVIFAVGR  393 (596)
T ss_dssp             EEETTSCEEEEEESEEEECSCE
T ss_pred             EEECCCCEEEEEECEEEEECCC
T ss_conf             8816895799970699995576


No 162
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.46  E-value=1.5e-07  Score=64.07  Aligned_cols=52  Identities=19%  Similarity=0.314  Sum_probs=37.5

Q ss_pred             CEEEECCCHHHHHHHHHHH-----HCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             6689879879999999999-----6599089983588832110100012435423602345541
Q T0604           109 RPIVIGFGPCGLFAGLVLA-----QMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFG  167 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La-----~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g  167 (549)
                      .|+||||||+||++|+.|+     ++|++|+||||.+......       +...+++.+...+.
T Consensus        10 DVlIVGaGp~GL~lA~~La~~~~~r~Gi~v~viEr~~~~~~~~-------ra~~l~~~tle~L~   66 (665)
T 1pn0_A           10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNG-------QADGLQCRTLESLK   66 (665)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSC-------SCCEECHHHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC-------EEEEECHHHHHHHH
T ss_conf             9899893989999999987260213898789993899988788-------08998989999999


No 163
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46  E-value=3.6e-06  Score=55.40  Aligned_cols=99  Identities=15%  Similarity=0.140  Sum_probs=72.6

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ...++++|||+|+.|+.+|..|++.|.+|.++++.+....+                            +          
T Consensus       147 ~~~~~vvVvGgG~ig~E~A~~l~~~g~~v~~v~~~~~~~~~----------------------------~----------  188 (447)
T 1nhp_A          147 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------------------------Y----------  188 (447)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------------------------T----------
T ss_pred             CCCCEEEEECCCCCCCCCCCHHHCCCCEEEEEEECCCCCCC----------------------------C----------
T ss_conf             58988999988710000120133058658999982632333----------------------------3----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                          .                             .......+...+++.|++++.++.++.+..++...  +...+++++
T Consensus       189 ----~-----------------------------~~~~~~~~~~~l~~~gi~~~~~~~v~~i~~~~~~~--~~~~~~~~i  233 (447)
T 1nhp_A          189 ----L-----------------------------DKEFTDVLTEEMEANNITIATGETVERYEGDGRVQ--KVVTDKNAY  233 (447)
T ss_dssp             ----C-----------------------------CHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCC--EEEESSCEE
T ss_pred             ----C-----------------------------HHHHHHHHHHHHHHEEEEEEEEEEEEEEEECCCEE--EEECCCCCC
T ss_conf             ----2-----------------------------06677777654320046543100279997035147--884278643


Q ss_pred             EECEEEEECCCC
Q ss_conf             705689931887
Q T0604           265 KSRHVVLAVGHS  276 (549)
Q Consensus       265 ~ad~VVlAtGhs  276 (549)
                      ++|.|++|+|..
T Consensus       234 ~~D~vl~a~G~~  245 (447)
T 1nhp_A          234 DADLVVVAVGVR  245 (447)
T ss_dssp             ECSEEEECSCEE
T ss_pred             CCCCCEEECCCC
T ss_conf             344311500246


No 164
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiation, alternative splicing; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.44  E-value=3.9e-06  Score=55.20  Aligned_cols=99  Identities=23%  Similarity=0.260  Sum_probs=71.1

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+++|+|||+|..|+..|..|++.|.+|+|++|.+...                             .+         
T Consensus       184 ~~~Pk~v~VIGgG~ig~E~A~~l~~lG~~Vtli~r~~~l~-----------------------------~~---------  225 (483)
T 3dgh_A          184 DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR-----------------------------GF---------  225 (483)
T ss_dssp             SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST-----------------------------TS---------
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCC-----------------------------CC---------
T ss_conf             2279659999977999999999986599369997165456-----------------------------55---------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEE-----
Q ss_conf             000211789999999668951001367641000127999999999999669889981343320405875899998-----
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL-----  258 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t-----  258 (549)
                                                         -..+...+...+...++.+++++.+..+...++....+..     
T Consensus       226 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (483)
T 3dgh_A          226 -----------------------------------DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVET  270 (483)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTT
T ss_pred             -----------------------------------CHHHHHHHHHHHHHHCCEECCCCEEEEEEECCCCCEEEEEEECCC
T ss_conf             -----------------------------------546799999999973803214616899998279835776420146


Q ss_pred             CCCCEEEECEEEEECCC
Q ss_conf             67848970568993188
Q T0604           259 SNGEEIKSRHVVLAVGH  275 (549)
Q Consensus       259 ~~g~~i~ad~VVlAtGh  275 (549)
                      .+++++++|.|++|+|.
T Consensus       271 ~~~~~~~~D~vl~a~Gr  287 (483)
T 3dgh_A          271 GEESEDVYDTVLWAIGR  287 (483)
T ss_dssp             CCEEEEEESEEEECSCE
T ss_pred             CCCEEEEEEEEEEEEEC
T ss_conf             76237875007999513


No 165
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3ljp_A*
Probab=98.40  E-value=2.3e-07  Score=62.92  Aligned_cols=34  Identities=26%  Similarity=0.333  Sum_probs=31.3

Q ss_pred             CCEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCC
Q ss_conf             766898798799999999996-5990899835888
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGKE  141 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~-~G~~V~VlErg~~  141 (549)
                      -.|||||+|++|..+|..|++ .|++|+|||+|+.
T Consensus        14 yDvIIVGsG~~G~v~A~rLae~~g~~VlvLE~G~~   48 (546)
T 2jbv_A           14 FDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD   48 (546)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred             EEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             33899896489999999997686986999846899


No 166
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, peroxisome; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.36  E-value=8.8e-08  Score=65.55  Aligned_cols=52  Identities=10%  Similarity=-0.058  Sum_probs=36.6

Q ss_pred             EECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHH
Q ss_conf             00012799999999999966988998134332040587589999867848970568993188767
Q T0604           214 IGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR  278 (549)
Q Consensus       214 ~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsar  278 (549)
                      -+......++..|.+.+...++++...+.+.....             ..+.++.+|.|+|..++
T Consensus       136 ~~~v~p~~~~~~l~~~~~~~g~~~~~~~~~~~~~~-------------~~~~~~~~v~~~G~~~~  187 (351)
T 3g3e_A          136 SLILEGKNYLQWLTERLTERGVKFFQRKVESFEEV-------------AREGADVIVNCTGVWAG  187 (351)
T ss_dssp             EEEECHHHHHHHHHHHHHHTTCEEEECCCCCHHHH-------------HHTTCSEEEECCGGGGG
T ss_pred             CEEECCHHHHHHHHHHHHCCCCEEEEEEEEECCCC-------------CCCCEEEEEECCCCCCC
T ss_conf             77985078778888776504404898665201234-------------45420123321422412


No 167
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA; HET: FAD; 2.10A {Thermus thermophilus HB8}
Probab=98.33  E-value=2.6e-06  Score=56.30  Aligned_cols=97  Identities=12%  Similarity=0.112  Sum_probs=68.3

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ...++|+|||+|+.|+.+|..|++.|.+|.+++|++....                               .        
T Consensus       150 ~~~~~vvViG~G~~~~e~A~~l~~~~~~V~~i~~~~~~~~-------------------------------~--------  190 (335)
T 2zbw_A          150 FQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA-------------------------------H--------  190 (335)
T ss_dssp             GTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS-------------------------------C--------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCHHH-------------------------------H--------
T ss_conf             3798899999872499999998724988999997350323-------------------------------4--------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEEC--C--
Q ss_conf             002117899999996689510013676410001279999999999996698899813433204058758999986--7--
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS--N--  260 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~--~--  260 (549)
                                                         ......+.+.+...|+++++++.|+.+..+++....+...  +  
T Consensus       191 -----------------------------------~~~~~~~~~~~~~~gi~i~~~~~v~~i~~~~~~~~~~~~~~~~g~  235 (335)
T 2zbw_A          191 -----------------------------------EASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQE  235 (335)
T ss_dssp             -----------------------------------HHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCC
T ss_pred             -----------------------------------HHHHHHHHHHHHHCCEEEEECCEEEEEECCCCEEEEEEEECCCCC
T ss_conf             -----------------------------------677899999987476799927677899636873678998526785


Q ss_pred             CCEEEECEEEEECCC
Q ss_conf             848970568993188
Q T0604           261 GEEIKSRHVVLAVGH  275 (549)
Q Consensus       261 g~~i~ad~VVlAtGh  275 (549)
                      +.+++||.||+|+|.
T Consensus       236 ~~~i~~D~vi~a~G~  250 (335)
T 2zbw_A          236 ELALEVDAVLILAGY  250 (335)
T ss_dssp             EEEEECSEEEECCCE
T ss_pred             EEEEECCEEEEEEEC
T ss_conf             599852889998603


No 168
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics, protein structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.31  E-value=1.1e-05  Score=52.40  Aligned_cols=112  Identities=21%  Similarity=0.289  Sum_probs=74.7

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ...++|+|||+|+.|+..|..+++.|.+++++++......+.                           +          
T Consensus       146 ~~~~~vvViGgG~~g~E~A~~l~~~g~~v~~i~~~~~~~~~~---------------------------~----------  188 (449)
T 3kd9_A          146 YKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS---------------------------F----------  188 (449)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT---------------------------S----------
T ss_pred             CCCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC---------------------------C----------
T ss_conf             023204316788527778899875287431686323345553---------------------------3----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                           .                              .....+.......++.++.++.+..+...+...  +...++.++
T Consensus       189 -----~------------------------------~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--~~~~~~~~i  231 (449)
T 3kd9_A          189 -----D------------------------------KEVTDILEEKLKKHVNLRLQEITMKIEGEERVE--KVVTDAGEY  231 (449)
T ss_dssp             -----C------------------------------HHHHHHHHHHHTTTSEEEESCCEEEEECSSSCC--EEEETTEEE
T ss_pred             -----C------------------------------CCHHHHHHHHCCEEEEEEECCEEEEEECCCCCE--EECCCCCEE
T ss_conf             -----2------------------------------210222221022024565221378872234411--101347448


Q ss_pred             EECEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             7056899318876799999996697111
Q T0604           265 KSRHVVLAVGHSARDTFEMLHERGVYME  292 (549)
Q Consensus       265 ~ad~VVlAtGhsard~~~~l~~~Gi~~~  292 (549)
                      ++|.|++|+|.....  .+|...|+.+.
T Consensus       232 ~~D~vl~a~G~~pn~--~~l~~~gl~~~  257 (449)
T 3kd9_A          232 KAELVILATGIKPNI--ELAKQLGVRIG  257 (449)
T ss_dssp             ECSEEEECSCEEECC--HHHHHTTCCBC
T ss_pred             ECCCCCCCCCCCCCC--CCCCCCCEEEE
T ss_conf             313222022445676--41224765870


No 169
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, class I; coenzyme A, flavin adenine dinucleotide, selenomethionine, FAD, flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.28  E-value=1.1e-05  Score=52.45  Aligned_cols=99  Identities=19%  Similarity=0.229  Sum_probs=73.4

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ...++|+|||+|+.|+.+|..+++.|.+|+++++++....                            .+          
T Consensus       184 ~~~~~vvviGgg~~~~e~a~~~~~~~~~vtlv~~~~~~l~----------------------------~~----------  225 (480)
T 3cgb_A          184 NKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT----------------------------IY----------  225 (480)
T ss_dssp             SCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS----------------------------SS----------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCCC----------------------------CC----------
T ss_conf             6897799989837777789887524763279986203344----------------------------22----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                                                        ...+.+.+.+.+++.|++++++++++.+..++ .+. +...++.++
T Consensus       226 ----------------------------------~~~~~~~l~~~l~~~gI~~~~~~~v~~i~~~~-~~~-~~~~~~~~i  269 (480)
T 3cgb_A          226 ----------------------------------DGDMAEYIYKEADKHHIEILTNENVKAFKGNE-RVE-AVETDKGTY  269 (480)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-BEE-EEEETTEEE
T ss_pred             ----------------------------------CHHHHHHHHHHHHCCCEEEECCCEEEEEECCC-EEE-EEECCCCEE
T ss_conf             ----------------------------------03455421101201425862373589996431-179-984036501


Q ss_pred             EECEEEEECCCCH
Q ss_conf             7056899318876
Q T0604           265 KSRHVVLAVGHSA  277 (549)
Q Consensus       265 ~ad~VVlAtGhsa  277 (549)
                      ++|.|++|+|...
T Consensus       270 ~~D~vl~a~G~~P  282 (480)
T 3cgb_A          270 KADLVLVSVGVKP  282 (480)
T ss_dssp             ECSEEEECSCEEE
T ss_pred             CCCEEEECCCCCC
T ss_conf             2467999236401


No 170
>1cf3_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.90A {Aspergillus niger} SCOP: c.3.1.2 d.16.1.1 PDB: 1gal_A*
Probab=98.28  E-value=5.6e-07  Score=60.52  Aligned_cols=37  Identities=24%  Similarity=0.305  Sum_probs=32.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCCC
Q ss_conf             7766898798799999999996-599089983588832
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGKEVR  143 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~-~G~~V~VlErg~~vg  143 (549)
                      .-.|||||+|+||+.+|..||+ .|++|+|||+|....
T Consensus        19 ~yDviVVGsG~aG~vlA~rLae~~g~~VlvLE~G~~~~   56 (583)
T 1cf3_A           19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYES   56 (583)
T ss_dssp             EEEEEEECCSHHHHHHHHHHTTSTTCCEEEEESSCCCT
T ss_pred             EEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCC
T ss_conf             76799989668999999999768898099988899986


No 171
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.26  E-value=8.9e-07  Score=59.24  Aligned_cols=36  Identities=25%  Similarity=0.284  Sum_probs=32.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCC
Q ss_conf             776689879879999999999659-908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMG-FNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G-~~V~VlErg~~v  142 (549)
                      .-.|||||+|+||+..|..|++.| ++|+|||+|...
T Consensus        24 ~YD~vIVGsG~aG~~~A~rLs~~~~~~VlvLE~G~~~   60 (587)
T 1gpe_A           24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE   60 (587)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             2028998968899999999987889859999068998


No 172
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.20  E-value=5.3e-07  Score=60.65  Aligned_cols=33  Identities=21%  Similarity=0.373  Sum_probs=30.4

Q ss_pred             CEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCC
Q ss_conf             66898798799999999996-5990899835888
Q T0604           109 RPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGKE  141 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~-~G~~V~VlErg~~  141 (549)
                      .|||||+|++|+.+|..|++ .|++|+|||+|+.
T Consensus         4 DviIVGsG~~G~~~A~~La~~~g~~VlvLE~G~~   37 (566)
T 3fim_B            4 DYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS   37 (566)
T ss_dssp             EEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             8799896489999999997687987999848899


No 173
>2zzc_A Thioredoxin reductase 1, cytoplasmic; rossmann fold, alternative splicing, electron transport, FAD, flavoprotein, NADP, nucleus, oxidoreductase; HET: FAD NAP; 2.60A {Homo sapiens} PDB: 2zzb_A* 2zz0_A* 2j3n_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.19  E-value=6e-05  Score=47.77  Aligned_cols=99  Identities=22%  Similarity=0.222  Sum_probs=67.9

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+++|+|||+|..|+..|..|++.|.+|+|+||.....                             .| |       
T Consensus       201 ~~~pk~vvVIGgG~ig~E~A~~l~~lG~~Vtli~r~~~L~-----------------------------~~-D-------  243 (513)
T 2zzc_A          201 PYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR-----------------------------GF-D-------  243 (513)
T ss_dssp             SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-----------------------------TS-C-------
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC-----------------------------CC-C-------
T ss_conf             0089769998987989999999997099699997476555-----------------------------44-9-------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEC----CCEEEEEEEC
Q ss_conf             000211789999999668951001367641000127999999999999669889981343320405----8758999986
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME----DGQITGVTLS  259 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~----~g~v~gV~t~  259 (549)
                                                          +.+.+.+.+.+++.++.++.+..++.+...    .+....+...
T Consensus       244 ------------------------------------~e~~~~l~~~l~~~gi~~~~~~~~~~~~~~e~~~~~~~~~~~~~  287 (513)
T 2zzc_A          244 ------------------------------------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQS  287 (513)
T ss_dssp             ------------------------------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECSTTCEEEEEEEE
T ss_pred             ------------------------------------HHHHHHHHHHHHHHCCEEECCCCEEEEEEEEECCCCEEEEEEEE
T ss_conf             ------------------------------------99999999999861433311452157999640456506999950


Q ss_pred             ----CCCEEEECEEEEECCC
Q ss_conf             ----7848970568993188
Q T0604           260 ----NGEEIKSRHVVLAVGH  275 (549)
Q Consensus       260 ----~g~~i~ad~VVlAtGh  275 (549)
                          ++.++++|.|++|+|.
T Consensus       288 ~~~~~~~~~~~D~VlvaiGr  307 (513)
T 2zzc_A          288 TNSEEIIEGEYNTVMLAIGR  307 (513)
T ss_dssp             SSSSCEEEEEESEEEECSCE
T ss_pred             CCCEEEEEECCCEEEEEECC
T ss_conf             44101110013226898646


No 174
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.07  E-value=1.6e-06  Score=57.65  Aligned_cols=35  Identities=20%  Similarity=0.381  Sum_probs=31.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      +-.|||||+|+||+.+|..|++. ++|+|||+|+..
T Consensus        26 ~yD~IIVGsG~aG~v~A~rLse~-~kVLvLE~G~~~   60 (536)
T 1ju2_A           26 SYDYVIVGGGTSGCPLAATLSEK-YKVLVLERGSLP   60 (536)
T ss_dssp             EEEEEEECCSTTHHHHHHHHTTT-SCEEEECSSBCG
T ss_pred             CCCEEEECCCHHHHHHHHHHHCC-CCEEEEECCCCC
T ss_conf             63579989538999999998579-948999158898


No 175
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green chemistry, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A*
Probab=97.94  E-value=0.00026  Score=43.75  Aligned_cols=37  Identities=24%  Similarity=0.082  Sum_probs=33.2

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7677668987987999999999965990899835888
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      -..+||+|||+|.+|.-.+-.|++.+.+|.++=|.+.
T Consensus       176 ~~gKrV~VIG~G~Sa~qi~~~la~~a~~v~v~~Rsp~  212 (540)
T 3gwf_A          176 LAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ  212 (540)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEECCC
T ss_conf             1566227983143321357898753141223652475


No 176
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.15A {Colwellia psychrerythraea 34H}
Probab=97.89  E-value=0.00018  Score=44.79  Aligned_cols=39  Identities=28%  Similarity=0.399  Sum_probs=34.2

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776776689879879999999999659908998358883
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ...+++|+|||+|+.|+.+|..+++.|.+|+|+||.+.+
T Consensus       171 ~~~pk~vvIIGgG~ig~E~A~~l~~~G~~Vtli~r~~~~  209 (492)
T 3ic9_A          171 NDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV  209 (492)
T ss_dssp             SSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred             HHCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCC
T ss_conf             436975999736643016779898569778998740456


No 177
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5
Probab=97.88  E-value=0.0004  Score=42.62  Aligned_cols=36  Identities=22%  Similarity=0.290  Sum_probs=33.1

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668987987999999999965990899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ..+||+|||+|.+|+-.|..|++.+.+|.++-|.+.
T Consensus       185 ~gK~V~ViG~G~Sa~qi~~~l~~~a~~v~~~~R~p~  220 (542)
T 1w4x_A          185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH  220 (542)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             787058983684232232666520541357605886


No 178
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thioredoxin reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.84  E-value=4.6e-05  Score=48.49  Aligned_cols=50  Identities=18%  Similarity=0.219  Sum_probs=40.0

Q ss_pred             EECCCCCCCCCCCCCCEEECCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             4204887430268985420123533578-99999999999999999999752
Q T0604           496 CIKRGKDFQSVNLKGFYPAGEGAGYAGG-ILSAGIDGIKVAEAVARDIVAAM  546 (549)
Q Consensus       496 ri~r~~tleS~~i~GLY~~GEgaGyagG-I~saa~~G~~~a~~i~~~~~~~~  546 (549)
                      .|..|+.||+ ++||+|.||+.+.|.+- ++.|+-.|-.||..+-++|...+
T Consensus       469 ~I~Vd~~~~T-svpgIyAaGDva~~p~kq~v~A~g~G~~AA~~a~~yL~~~~  519 (521)
T 1hyu_A          469 EIIIDAKCET-SVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTK  519 (521)
T ss_dssp             CBCCCTTCBC-SSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CEEECCCCCC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             4831959743-89999999958588873999999999999999999740258


No 179
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus HB8} PDB: 2eq8_A* 2eq9_A*
Probab=97.83  E-value=2.3e-05  Score=50.40  Aligned_cols=99  Identities=26%  Similarity=0.347  Sum_probs=77.0

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      .++++|+|||||+.|+.+|..|++.|.+|+|+|+.+.+..                                        
T Consensus       167 ~~pk~vvIiGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ll~----------------------------------------  206 (464)
T 2eq6_A          167 GLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP----------------------------------------  206 (464)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------------------------------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCC----------------------------------------
T ss_conf             2988499999789999999999976992999965884421----------------------------------------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEEC-----
Q ss_conf             002117899999996689510013676410001279999999999996698899813433204058758999986-----
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS-----  259 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~-----  259 (549)
                        ..                              -+.+.+.+.+.+++.|+++++++.|+++..+++.+. |++.     
T Consensus       207 --~~------------------------------d~~~~~~l~~~l~~~gI~~~~~~~v~~i~~~~~~~~-V~l~~~~~~  253 (464)
T 2eq6_A          207 --QG------------------------------DPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLH-VRLEPAEGG  253 (464)
T ss_dssp             --TS------------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEE-EEEEETTCC
T ss_pred             --CC------------------------------CHHHHHHHHHHHHHCCCCCEECEEEEEEEECCCEEE-EEEEECCCC
T ss_conf             --14------------------------------899999999999864773010102589998289389-999986689


Q ss_pred             CCCEEEECEEEEECCCC
Q ss_conf             78489705689931887
Q T0604           260 NGEEIKSRHVVLAVGHS  276 (549)
Q Consensus       260 ~g~~i~ad~VVlAtGhs  276 (549)
                      +++++++|.|++|+|..
T Consensus       254 ~~~~i~~D~vi~a~G~~  270 (464)
T 2eq6_A          254 EGEEVVVDKVLVAVGRK  270 (464)
T ss_dssp             SCEEEEESEEEECSCEE
T ss_pred             CEEEEECCEEEECCCCC
T ss_conf             70799929999957742


No 180
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis}
Probab=97.80  E-value=3.1e-05  Score=49.60  Aligned_cols=101  Identities=25%  Similarity=0.350  Sum_probs=76.3

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+++|+|||+|..|+.+|..|++.|.+|+|+||.+.+..+                            + |       
T Consensus       168 ~~~pk~vvVIGgG~iglE~A~~l~~~G~~Vtlv~~~~~~l~~----------------------------~-D-------  211 (464)
T 2a8x_A          168 RELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN----------------------------E-D-------  211 (464)
T ss_dssp             SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------------------S-C-------
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC----------------------------C-C-------
T ss_conf             248866899858747999999999669959999947865754----------------------------4-8-------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC--C
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867--8
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN--G  261 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~--g  261 (549)
                                                          +.+.+.+.+.+++.|+++++++.++.+...++........+  +
T Consensus       212 ------------------------------------~~~~~~l~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (464)
T 2a8x_A          212 ------------------------------------ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVA  255 (464)
T ss_dssp             ------------------------------------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCE
T ss_pred             ------------------------------------HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCC
T ss_conf             ------------------------------------67899999998755875334653100103321000110012455


Q ss_pred             CEEEECEEEEECCCC
Q ss_conf             489705689931887
Q T0604           262 EEIKSRHVVLAVGHS  276 (549)
Q Consensus       262 ~~i~ad~VVlAtGhs  276 (549)
                      +++++|.|++|+|..
T Consensus       256 ~~i~~D~Vl~a~G~~  270 (464)
T 2a8x_A          256 QELKAEKVLQAIGFA  270 (464)
T ss_dssp             EEEEESEEEECSCEE
T ss_pred             CEEECCEEEECCCCC
T ss_conf             013312578857767


No 181
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77  E-value=3.2e-05  Score=49.47  Aligned_cols=99  Identities=17%  Similarity=0.261  Sum_probs=72.5

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+++|+|||+|+.|+.+|..|++.|.+|+|+|+++.+...                            +         
T Consensus       168 ~~~pk~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~----------------------------~---------  210 (458)
T 1lvl_A          168 KALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT----------------------------Y---------  210 (458)
T ss_dssp             SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------------------------S---------
T ss_pred             HHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC----------------------------H---------
T ss_conf             125995999998899999999999759979999837844431----------------------------0---------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCE
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867848
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE  263 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~  263 (549)
                                                         -..+.+.+.+.++..|+++++++.++.+........ +...++.+
T Consensus       211 -----------------------------------d~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~-~~~~~~~~  254 (458)
T 1lvl_A          211 -----------------------------------DSELTAPVAESLKKLGIALHLGHSVEGYENGCLLAN-DGKGGQLR  254 (458)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEE-CSSSCCCE
T ss_pred             -----------------------------------HHHHHHHHHCCCCCCCEEEEECCEEEEEECCCEEEE-ECCCCEEE
T ss_conf             -----------------------------------056654200100012149983646999945725899-64897057


Q ss_pred             EEECEEEEECCC
Q ss_conf             970568993188
Q T0604           264 IKSRHVVLAVGH  275 (549)
Q Consensus       264 i~ad~VVlAtGh  275 (549)
                      +++|.|++|+|.
T Consensus       255 ~~~D~Vl~A~G~  266 (458)
T 1lvl_A          255 LEADRVLVAVGR  266 (458)
T ss_dssp             ECCSCEEECCCE
T ss_pred             EECCEEEEEECC
T ss_conf             406989991273


No 182
>1xhc_A NADH oxidase /nitrite reductase; southeast collaboratory for structural genomics, secsg, hyperthermophIle; HET: FAD; 2.35A {Pyrococcus furiosus dsm 3638} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77  E-value=9e-05  Score=46.66  Aligned_cols=91  Identities=22%  Similarity=0.292  Sum_probs=66.0

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .++++|||+|+.|+..|..|++.|.+|+|+++.+....                             + +          
T Consensus       143 ~~~~~vvG~G~~g~e~A~~l~~~g~~v~l~~~~~~~~~-----------------------------~-~----------  182 (367)
T 1xhc_A          143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-----------------------------L-D----------  182 (367)
T ss_dssp             HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-----------------------------C-C----------
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCC-----------------------------C-C----------
T ss_conf             64321346765431126668655872156431024435-----------------------------7-6----------


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEE
Q ss_conf             21178999999966895100136764100012799999999999966988998134332040587589999867848970
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKS  266 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~a  266 (549)
                                                       +.+.+.+.+.+++.|++++++++++++..+  .   +.+ +++.+++
T Consensus       183 ---------------------------------~~~~~~~~~~l~~~Gv~~~~~~~v~~v~~~--~---~~~-~~~~~~~  223 (367)
T 1xhc_A          183 ---------------------------------EELSNMIKDMLEETGVKFFLNSELLEANEE--G---VLT-NSGFIEG  223 (367)
T ss_dssp             ---------------------------------HHHHHHHHHHHHHTTEEEECSCCEEEECSS--E---EEE-TTEEEEC
T ss_pred             ---------------------------------HHHHHHHHHHHHHCCCEEEEEEEEEEEECC--C---CCC-CCCCCCC
T ss_conf             ---------------------------------489999999998659715432468983023--4---321-1112344


Q ss_pred             CEEEEECCCC
Q ss_conf             5689931887
Q T0604           267 RHVVLAVGHS  276 (549)
Q Consensus       267 d~VVlAtGhs  276 (549)
                      |.||+|+|..
T Consensus       224 d~vi~a~G~~  233 (367)
T 1xhc_A          224 KVKICAIGIV  233 (367)
T ss_dssp             SCEEEECCEE
T ss_pred             CEEEEEECCC
T ss_conf             2169995243


No 183
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.77  E-value=3.8e-05  Score=49.00  Aligned_cols=100  Identities=21%  Similarity=0.271  Sum_probs=76.7

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ..++++|+|||+|+.|+..|..|++.|.+|+|+|+++.+...                            +         
T Consensus       177 ~~~pk~v~VvGgG~ig~E~A~~l~~~G~~Vtlie~~~~il~~----------------------------~---------  219 (476)
T 3lad_A          177 QNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA----------------------------V---------  219 (476)
T ss_dssp             SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------------------------S---------
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC----------------------------C---------
T ss_conf             106972699687799999999999759979999847755776----------------------------5---------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEEC--CC
Q ss_conf             0002117899999996689510013676410001279999999999996698899813433204058758999986--78
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS--NG  261 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~--~g  261 (549)
                                                         -+.+.+.+.+.+++.|+++++++.++.+..+++......+.  ++
T Consensus       220 -----------------------------------D~ei~~~l~~~l~~~GV~i~~~~~v~~ie~~~~~~~~~~~~~~~~  264 (476)
T 3lad_A          220 -----------------------------------DEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGE  264 (476)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEE
T ss_pred             -----------------------------------CHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCC
T ss_conf             -----------------------------------778899999988744840035635788764178856999976894


Q ss_pred             CEEEECEEEEECCC
Q ss_conf             48970568993188
Q T0604           262 EEIKSRHVVLAVGH  275 (549)
Q Consensus       262 ~~i~ad~VVlAtGh  275 (549)
                      +.+++|.|++|+|.
T Consensus       265 ~~~~~D~VlvA~Gr  278 (476)
T 3lad_A          265 KSQAFDKLIVAVGR  278 (476)
T ss_dssp             EEEEESEEEECSCE
T ss_pred             EEEECCEEEEEECC
T ss_conf             22444899997266


No 184
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.73  E-value=3e-05  Score=49.65  Aligned_cols=100  Identities=21%  Similarity=0.323  Sum_probs=76.8

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+++|+|||+|+.|+..|..|++.|.+|+|+|+++.+..+                            |         
T Consensus       174 ~~~pk~v~VIGgG~ig~E~A~~l~~~G~~Vtli~~~~~ll~~----------------------------~---------  216 (470)
T 1dxl_A          174 SEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT----------------------------M---------  216 (470)
T ss_dssp             SSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------------------------S---------
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC----------------------------C---------
T ss_conf             206984999997899999999999649969999868834320----------------------------1---------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCC-EEEEEEECCC-
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587-5899998678-
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDG-QITGVTLSNG-  261 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g-~v~gV~t~~g-  261 (549)
                                                         -+.+.+.+.+.+++.|++++++++|+.+...++ ....+...++ 
T Consensus       217 -----------------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~~~  261 (470)
T 1dxl_A          217 -----------------------------------DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGG  261 (470)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSC
T ss_pred             -----------------------------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCEEEEEECCCC
T ss_conf             -----------------------------------999999999999977979974550799998179826999977998


Q ss_pred             --CEEEECEEEEECCC
Q ss_conf             --48970568993188
Q T0604           262 --EEIKSRHVVLAVGH  275 (549)
Q Consensus       262 --~~i~ad~VVlAtGh  275 (549)
                        .++++|.|++|+|.
T Consensus       262 ~~~~i~~D~vl~A~Gr  277 (470)
T 1dxl_A          262 EQTIIEADVVLVSAGR  277 (470)
T ss_dssp             CCEEEEESEEECCCCE
T ss_pred             CEEEECCCEEEECCCC
T ss_conf             1346506778884687


No 185
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomic; HET: FAD; 2.15A {Agrobacterium tumefaciens str}
Probab=97.69  E-value=0.00012  Score=45.89  Aligned_cols=45  Identities=27%  Similarity=0.308  Sum_probs=31.7

Q ss_pred             CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8874302689854201235335789999999999999999999975
Q T0604           500 GKDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIVAA  545 (549)
Q Consensus       500 ~~tleS~~i~GLY~~GEgaGyagGI~saa~~G~~~a~~i~~~~~~~  545 (549)
                      |+++++ ++||+|.||+.++...-+..|.-+|..||..|.++|+..
T Consensus       250 d~~~~T-s~p~VyA~GD~~~~~~~~~~A~~~G~~Aa~~i~~~l~~~  294 (297)
T 3fbs_A          250 DPMKQT-TARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFP  294 (297)
T ss_dssp             CTTCBC-SSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             989731-899999998578982279999999999999999984370


No 186
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- terminal domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.68  E-value=0.00011  Score=46.23  Aligned_cols=84  Identities=21%  Similarity=0.198  Sum_probs=61.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .++++|+|+|+.|+.+|..|++.|.+|.|+++.+.+..+.                           +            
T Consensus       146 ~~~v~viGgG~~g~e~A~~l~~~g~~vtv~~~~~~~l~~~---------------------------~------------  186 (385)
T 3klj_A          146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQ---------------------------L------------  186 (385)
T ss_dssp             HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTT---------------------------S------------
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---------------------------C------------
T ss_conf             9769999786056789999996299279999615311233---------------------------5------------


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEE
Q ss_conf             21178999999966895100136764100012799999999999966988998134332040587589999867848970
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKS  266 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~a  266 (549)
                                                      -+.+...+.+.+++.|++++++++++++              |.++++
T Consensus       187 --------------------------------~~~~~~~~~~~l~~~gv~~~~~~~v~~~--------------g~~i~~  220 (385)
T 3klj_A          187 --------------------------------DRDGGLFLKDKLDRLGIKIYTNSNFEEM--------------GDLIRS  220 (385)
T ss_dssp             --------------------------------CHHHHHHHHHHHHTTTCEEECSCCGGGC--------------HHHHHH
T ss_pred             --------------------------------CHHHHHHHHHHHHHCCEEEEECCEEEEC--------------CCEEEE
T ss_conf             --------------------------------7899999999876277599958799865--------------749950


Q ss_pred             CEEEEECCC
Q ss_conf             568993188
Q T0604           267 RHVVLAVGH  275 (549)
Q Consensus       267 d~VVlAtGh  275 (549)
                      |.||+|+|.
T Consensus       221 D~vi~a~G~  229 (385)
T 3klj_A          221 SCVITAVGV  229 (385)
T ss_dssp             SEEEECCCE
T ss_pred             CEEEECCCC
T ss_conf             689986465


No 187
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.68  E-value=6.2e-05  Score=47.66  Aligned_cols=99  Identities=20%  Similarity=0.327  Sum_probs=73.9

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ..+++|+|||+|..|+.+|..|++.|.+|+++|+.+.+..+.                                      
T Consensus       181 ~~pk~VvVIGgG~ig~E~A~~l~~~G~~Vtli~r~~~~l~~~--------------------------------------  222 (478)
T 1v59_A          181 EIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASM--------------------------------------  222 (478)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSS--------------------------------------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC--------------------------------------
T ss_conf             389879999988999999999997598799985023333333--------------------------------------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECC-CEEEEEEECC---
Q ss_conf             002117899999996689510013676410001279999999999996698899813433204058-7589999867---
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVTLSN---  260 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~-g~v~gV~t~~---  260 (549)
                                                        .......+.+.+++.++.+++...+..+...+ +.+..+.+.+   
T Consensus       223 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~~~~~~  268 (478)
T 1v59_A          223 ----------------------------------DGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKT  268 (478)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTT
T ss_pred             ----------------------------------CCHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCEEEEEEEECCC
T ss_conf             ----------------------------------3201478999998510405640024689970688426899763478


Q ss_pred             --CCEEEECEEEEECCC
Q ss_conf             --848970568993188
Q T0604           261 --GEEIKSRHVVLAVGH  275 (549)
Q Consensus       261 --g~~i~ad~VVlAtGh  275 (549)
                        ++++++|.|++|+|.
T Consensus       269 ~~~~~~~~D~Vl~a~G~  285 (478)
T 1v59_A          269 NKQENLEAEVLLVAVGR  285 (478)
T ss_dssp             TEEEEEEESEEEECSCE
T ss_pred             CCEEEEECCEEEECEEE
T ss_conf             96389992899987000


No 188
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.67  E-value=0.00031  Score=43.31  Aligned_cols=35  Identities=20%  Similarity=0.346  Sum_probs=30.2

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             76776689879879999999999659908998358
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      ...++|+|||+|+.|+.+|..|++.+.+|.++.+.
T Consensus       150 ~~~k~v~VvGgG~~g~e~A~~l~~~~~~v~~~~~~  184 (325)
T 2q7v_A          150 YKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRR  184 (325)
T ss_dssp             GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             28998999998989999999998446853599823


No 189
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.67  E-value=0.00067  Score=41.20  Aligned_cols=34  Identities=21%  Similarity=0.284  Sum_probs=30.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             6776689879879999999999659908998358
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      ..++|+|||+|+.|+.+|..|++.|.+|.++++.
T Consensus       144 ~~~~vvVvG~G~~g~e~A~~l~~~g~~v~~~~~~  177 (320)
T 1trb_A          144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRR  177 (320)
T ss_dssp             TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCCCEECCC
T ss_conf             5988999998899999999997326743121034


No 190
>2vq7_A Flavin-containing monooxygenase; NADP, drug metabolism NADP, oxidoreductase, drug metabolism; HET: FAD NAP EPE PGE PG4; 2.60A {Methylophaga SP} PDB: 2vqb_A*
Probab=97.66  E-value=0.00037  Score=42.82  Aligned_cols=33  Identities=12%  Similarity=0.048  Sum_probs=30.1

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             677668987987999999999965990899835
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVER  138 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlEr  138 (549)
                      ..++|+|||+|.+|+-.|..|++.|.+|+++-|
T Consensus       201 ~gk~VlVVG~G~Sa~Dia~~l~~~g~~v~~~~r  233 (461)
T 2vq7_A          201 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCY  233 (461)
T ss_dssp             TTCEEEEECSSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEE
T ss_conf             798699988873099999999974696999997


No 191
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A*
Probab=97.63  E-value=8.7e-05  Score=46.76  Aligned_cols=101  Identities=19%  Similarity=0.283  Sum_probs=76.4

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+++|+|||+|+.|+..|..|++.|.+|+|+|+.+.+..+..                                    
T Consensus       175 ~~~pk~vvIIGgG~iGlE~A~~l~~~G~~Vtlv~~~~~~L~~~~------------------------------------  218 (474)
T 1zmd_A          175 KKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGI------------------------------------  218 (474)
T ss_dssp             SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSC------------------------------------
T ss_pred             HHCCCEEEEECCCHHHHHHHHHHHHCCCCHHEEEECCHHHCCCC------------------------------------
T ss_conf             01697699999689999999999863531010343321101333------------------------------------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEE--EEECCC
Q ss_conf             000211789999999668951001367641000127999999999999669889981343320405875899--998678
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITG--VTLSNG  261 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~g--V~t~~g  261 (549)
                                                         -+.+.+.+.+.+++.|+++++++.|+.+..+++....  +...++
T Consensus       219 -----------------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~v~~~~~  263 (474)
T 1zmd_A          219 -----------------------------------DMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASG  263 (474)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTS
T ss_pred             -----------------------------------HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEECCC
T ss_conf             -----------------------------------699999999999975996412300466654033313799998779


Q ss_pred             ---CEEEECEEEEECCC
Q ss_conf             ---48970568993188
Q T0604           262 ---EEIKSRHVVLAVGH  275 (549)
Q Consensus       262 ---~~i~ad~VVlAtGh  275 (549)
                         +++++|.|++|+|.
T Consensus       264 ~~~~~~~~D~vl~a~G~  280 (474)
T 1zmd_A          264 GKAEVITCDVLLVCIGR  280 (474)
T ss_dssp             CCCEEEEESEEEECSCE
T ss_pred             CCEEEEECCEEEEEECC
T ss_conf             90489987999990082


No 192
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.54  E-value=0.00012  Score=45.84  Aligned_cols=99  Identities=19%  Similarity=0.170  Sum_probs=79.1

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ..+++|+|||+|..|+.+|..|++.|.+|+|+|+++.+..+                            +          
T Consensus       164 ~~pk~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ll~~----------------------------~----------  205 (463)
T 2r9z_A          164 QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ----------------------------F----------  205 (463)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------------------S----------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCC----------------------------H----------
T ss_conf             27998999998899999999999769999775420344562----------------------------0----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                                                        -..+...+.+.+++.|+++++++++..+..+++....+...+++.+
T Consensus       206 ----------------------------------d~e~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~  251 (463)
T 2r9z_A          206 ----------------------------------DPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLE  251 (463)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEE
T ss_pred             ----------------------------------HHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCEEEEEECCCCEEE
T ss_conf             ----------------------------------4555555555532154599823289999975986999986897899


Q ss_pred             EECEEEEECCC
Q ss_conf             70568993188
Q T0604           265 KSRHVVLAVGH  275 (549)
Q Consensus       265 ~ad~VVlAtGh  275 (549)
                      ++|.||+|+|.
T Consensus       252 ~~D~vl~a~G~  262 (463)
T 2r9z_A          252 GFDSVIWAVGR  262 (463)
T ss_dssp             EESEEEECSCE
T ss_pred             EECEEEEEEEE
T ss_conf             62569999867


No 193
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavoprotein, FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.52  E-value=0.00012  Score=45.91  Aligned_cols=99  Identities=18%  Similarity=0.196  Sum_probs=75.7

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ..+++|+|||+|+.|+..|..|++.|.+|+|+|+.+.+..                                        
T Consensus       183 ~~pk~v~VIGgG~iglE~A~~l~~lG~~Vtli~~~~~ll~----------------------------------------  222 (482)
T 1ojt_A          183 EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ----------------------------------------  222 (482)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST----------------------------------------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCC----------------------------------------
T ss_conf             0599799999789999999999976997899983565576----------------------------------------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEE----CC
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998----67
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL----SN  260 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t----~~  260 (549)
                        .+                              -+.+.+.+.+.++..|+++++++.++.+..+++... +.+    .+
T Consensus       223 --~~------------------------------d~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~-~~~~~~~~~  269 (482)
T 1ojt_A          223 --GA------------------------------DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVY-VTFEGANAP  269 (482)
T ss_dssp             --TS------------------------------CHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEE-EEEESSSCC
T ss_pred             --CC------------------------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCEEE-EEEEEECCC
T ss_conf             --44------------------------------699999988778860735632526899997499189-999750344


Q ss_pred             CCEEEECEEEEECCCC
Q ss_conf             8489705689931887
Q T0604           261 GEEIKSRHVVLAVGHS  276 (549)
Q Consensus       261 g~~i~ad~VVlAtGhs  276 (549)
                      ++++++|.|++|+|..
T Consensus       270 ~~~~~~D~vl~a~G~~  285 (482)
T 1ojt_A          270 KEPQRYDAVLVAAGRA  285 (482)
T ss_dssp             SSCEEESCEEECCCEE
T ss_pred             CCCCCCCEEEEECCCC
T ss_conf             4001158899941665


No 194
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.40  E-value=0.00022  Score=44.23  Aligned_cols=99  Identities=15%  Similarity=0.185  Sum_probs=73.7

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ..+++|+|||+|..|+..|..|++.|.+|+|+|+.+.+..+                            +          
T Consensus       174 ~~pk~vvIiGgG~iglE~A~~l~~~g~~Vtli~~~~~il~~----------------------------~----------  215 (500)
T 1onf_A          174 KESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK----------------------------F----------  215 (500)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT----------------------------S----------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCHHCCC----------------------------C----------
T ss_conf             58987999997689999999988629779999864500102----------------------------2----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCE-EEEEEECCCCE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875-89999867848
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQ-ITGVTLSNGEE  263 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~-v~gV~t~~g~~  263 (549)
                                                        ...+.+.+...++..+++++.++.+..+...... .......++.+
T Consensus       216 ----------------------------------~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (500)
T 1onf_A          216 ----------------------------------DESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIY  261 (500)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEE
T ss_pred             ----------------------------------CHHHHHHHHHHHHHCCEEEEECEEEEEEEEECCCEEEEEECCCCCE
T ss_conf             ----------------------------------6899999999998658499964179999980696099996079730


Q ss_pred             EEECEEEEECCC
Q ss_conf             970568993188
Q T0604           264 IKSRHVVLAVGH  275 (549)
Q Consensus       264 i~ad~VVlAtGh  275 (549)
                      +++|.+++|+|.
T Consensus       262 ~~~d~vlva~G~  273 (500)
T 1onf_A          262 EHFDHVIYCVGR  273 (500)
T ss_dssp             EEESEEEECCCB
T ss_pred             EEEEEEEEEECC
T ss_conf             554578997163


No 195
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.40  E-value=0.00024  Score=44.00  Aligned_cols=38  Identities=26%  Similarity=0.383  Sum_probs=34.0

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             77677668987987999999999965990899835888
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ..++++|+|||+|+.|+.+|..|++.|.+|+++++.+.
T Consensus       169 ~~~pk~vvVIGgG~ig~E~A~~l~~~G~~vt~i~~~~~  206 (466)
T 3l8k_A          169 RKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR  206 (466)
T ss_dssp             CSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             HCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf             20798899999889999999998618978998641012


No 196
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, alternative splicing, FAD, mitochondrion, NADP, redox-active center, selenium; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.36  E-value=0.00033  Score=43.14  Aligned_cols=100  Identities=16%  Similarity=0.198  Sum_probs=75.1

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+++++|||+|..|+..|..+++.|.+|+|+||.+.+.                             .| |       
T Consensus       182 ~~~Pk~vvVIGgG~iGlE~A~~~~~lG~~Vtvi~r~~~L~-----------------------------~~-D-------  224 (488)
T 3dgz_A          182 KESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR-----------------------------GF-D-------  224 (488)
T ss_dssp             SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-----------------------------TS-C-------
T ss_pred             HHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCC-----------------------------CC-C-------
T ss_conf             0079639998686428769999972798489998056565-----------------------------41-8-------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC---
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867---
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN---  260 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~---  260 (549)
                                                          +++.+.+++.+++.|+++++++.++.+...++....+.+.+   
T Consensus       225 ------------------------------------~e~~~~l~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (488)
T 3dgz_A          225 ------------------------------------QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHAS  268 (488)
T ss_dssp             ------------------------------------HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTT
T ss_pred             ------------------------------------HHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCCEEEEEEECCC
T ss_conf             ------------------------------------99999999999961020023736568886215640466420246


Q ss_pred             --CCEEEECEEEEECCCC
Q ss_conf             --8489705689931887
Q T0604           261 --GEEIKSRHVVLAVGHS  276 (549)
Q Consensus       261 --g~~i~ad~VVlAtGhs  276 (549)
                        .+++++|.|++|+|..
T Consensus       269 ~~~~~i~~D~vl~a~Gr~  286 (488)
T 3dgz_A          269 GKEDTGTFDTVLWAIGRV  286 (488)
T ss_dssp             TEEEEEEESEEEECSCEE
T ss_pred             CCCEEEECCEEEEEECCC
T ss_conf             763253034599955865


No 197
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.30  E-value=0.0025  Score=37.65  Aligned_cols=47  Identities=17%  Similarity=0.261  Sum_probs=38.2

Q ss_pred             CCCCCCCCCCCCEEECCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             887430268985420123533578---999999999999999999997521
Q T0604           500 GKDFQSVNLKGFYPAGEGAGYAGG---ILSAGIDGIKVAEAVARDIVAAME  547 (549)
Q Consensus       500 ~~tleS~~i~GLY~~GEgaGyagG---I~saa~~G~~~a~~i~~~~~~~~~  547 (549)
                      |++||+ ++||+|.||+.++|-++   ++.|+-+|..||..|.++|...+.
T Consensus       272 d~~~~T-s~~~IyA~GDv~~~~~~~~~~~~A~~~G~~AA~~i~~~l~~~~~  321 (323)
T 3f8d_A          272 DEWMRT-SVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKKG  321 (323)
T ss_dssp             CTTCBC-SSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             CCCCCC-CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             999651-89999998957489887629999999999999999999744515


No 198
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.27  E-value=0.00041  Score=42.51  Aligned_cols=100  Identities=20%  Similarity=0.247  Sum_probs=72.3

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ...++|+|||+|+.|+.+|..|++.|.+|+++++++.+...                            +          
T Consensus       172 ~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtli~~~~~~l~~----------------------------~----------  213 (468)
T 2qae_A          172 RVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT----------------------------L----------  213 (468)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------------------S----------
T ss_pred             HCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECHHHHHH----------------------------C----------
T ss_conf             15988999999788999999999619869999973064430----------------------------3----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHH-HHHCCCEEEEECCCCCCEECCCEEE-EEEECCCC
Q ss_conf             002117899999996689510013676410001279999999999-9966988998134332040587589-99986784
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRAT-IIELGGEIRFSTRVDDLHMEDGQIT-GVTLSNGE  262 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~-l~~~G~~i~~~t~V~~i~~~~g~v~-gV~t~~g~  262 (549)
                           .                             ..+.+.+.++ .+..|++++.++++..+...++.+. .+.+.+|+
T Consensus       214 -----~-----------------------------~~~~~~l~~~l~~~~gv~v~~~~~v~~i~~~~~~~~~~v~~~~G~  259 (468)
T 2qae_A          214 -----D-----------------------------EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGK  259 (468)
T ss_dssp             -----C-----------------------------HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---
T ss_pred             -----C-----------------------------HHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCEEEEEEECCCCC
T ss_conf             -----7-----------------------------988899999997447679972328999860461689999858995


Q ss_pred             --EEEECEEEEECCCC
Q ss_conf             --89705689931887
Q T0604           263 --EIKSRHVVLAVGHS  276 (549)
Q Consensus       263 --~i~ad~VVlAtGhs  276 (549)
                        ++++|.|++|+|..
T Consensus       260 ~~~i~~D~Vi~a~G~~  275 (468)
T 2qae_A          260 RETVTCEALLVSVGRR  275 (468)
T ss_dssp             EEEEEESEEEECSCEE
T ss_pred             EEEEECCEEEEEECCC
T ss_conf             7887529899946885


No 199
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.27  E-value=0.00045  Score=42.29  Aligned_cols=99  Identities=22%  Similarity=0.308  Sum_probs=76.6

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ..+++|+|||+|..|+.+|..|++.|.+|+++++.+.+..                                        
T Consensus       168 ~~~k~vvIvGgG~ig~E~A~~l~~~g~~Vtli~~~~~l~~----------------------------------------  207 (455)
T 1ebd_A          168 EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS----------------------------------------  207 (455)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST----------------------------------------
T ss_pred             HCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCC----------------------------------------
T ss_conf             6699789999971488899999635955500003663344----------------------------------------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCC--C
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678--4
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG--E  262 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g--~  262 (549)
                        ..                              -+.+...+.+.+++.|++++++++++.+..+++....+...+|  .
T Consensus       208 --~~------------------------------d~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~g~~~  255 (455)
T 1ebd_A          208 --GF------------------------------EKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETK  255 (455)
T ss_dssp             --TS------------------------------CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEE
T ss_pred             --CC------------------------------CHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCEEEEEEECCCCEE
T ss_conf             --55------------------------------7899999999986268499947589999952864799995189456


Q ss_pred             EEEECEEEEECCC
Q ss_conf             8970568993188
Q T0604           263 EIKSRHVVLAVGH  275 (549)
Q Consensus       263 ~i~ad~VVlAtGh  275 (549)
                      ++++|.|++|+|.
T Consensus       256 ~~~~D~vi~aiG~  268 (455)
T 1ebd_A          256 TIDADYVLVTVGR  268 (455)
T ss_dssp             EEEESEEEECSCE
T ss_pred             EEECCCEEEEECC
T ss_conf             8841418999764


No 200
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unknown function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.25  E-value=0.00048  Score=42.12  Aligned_cols=99  Identities=18%  Similarity=0.288  Sum_probs=78.0

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+++++|||+|..|+..|..|++.|.+|+|+||.+.+...                            + |       
T Consensus       179 ~~~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlie~~~~ll~~----------------------------~-d-------  222 (499)
T 1xdi_A          179 DALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY----------------------------E-D-------  222 (499)
T ss_dssp             SSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC----------------------------S-S-------
T ss_pred             CCCCCHHEEECCCHHHHHHHEEECCCCCEEEEEECCCCCCHH----------------------------H-H-------
T ss_conf             468624200012100121110202469779887427630110----------------------------3-4-------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCE
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867848
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE  263 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~  263 (549)
                                                          ..+...+.+.+...|+.++.++.++.+...++... +.+.++++
T Consensus       223 ------------------------------------~e~~~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~-~~~~~~~~  265 (499)
T 1xdi_A          223 ------------------------------------ADAALVLEESFAERGVRLFKNARAASVTRTGAGVL-VTMTDGRT  265 (499)
T ss_dssp             ------------------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEE-EEETTSCE
T ss_pred             ------------------------------------HHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCE-ECCCCCCE
T ss_conf             ------------------------------------56777655454216750343223588864178640-01467730


Q ss_pred             EEECEEEEECCC
Q ss_conf             970568993188
Q T0604           264 IKSRHVVLAVGH  275 (549)
Q Consensus       264 i~ad~VVlAtGh  275 (549)
                      +++|.|++|+|.
T Consensus       266 ~~~D~vl~a~Gr  277 (499)
T 1xdi_A          266 VEGSHALMTIGS  277 (499)
T ss_dssp             EEESEEEECCCE
T ss_pred             ECCCCEEEEECC
T ss_conf             013407886064


No 201
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphide oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.18  E-value=0.0018  Score=38.52  Aligned_cols=46  Identities=20%  Similarity=0.285  Sum_probs=28.8

Q ss_pred             CCCCCCCCCCCCEEECCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88743026898542012353357-899999999999999999999752
Q T0604           500 GKDFQSVNLKGFYPAGEGAGYAG-GILSAGIDGIKVAEAVARDIVAAM  546 (549)
Q Consensus       500 ~~tleS~~i~GLY~~GEgaGyag-GI~saa~~G~~~a~~i~~~~~~~~  546 (549)
                      |++||+ ++||+|.||+.+++.. =...|+-+|..||..+.+++...|
T Consensus       262 d~~~~T-s~pgIfAaGDv~~~~~~~~~~A~~~G~~Aa~~a~~~l~~~k  308 (310)
T 1fl2_A          262 DAKCET-NVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTK  308 (310)
T ss_dssp             CTTCBC-SSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             929744-89999999978778744999999999999999999862247


No 202
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* 2grt_A* 4grt_A* ...
Probab=97.18  E-value=0.00062  Score=41.39  Aligned_cols=99  Identities=15%  Similarity=0.195  Sum_probs=72.2

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ..+++|+|||+|..|+.+|..|++.|.+|+++++.+....+                                       
T Consensus       185 ~~pk~vvVIGgG~ig~E~A~~l~~lg~~vt~v~~~~~~l~~---------------------------------------  225 (478)
T 3dk9_A          185 ELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS---------------------------------------  225 (478)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---------------------------------------
T ss_pred             HCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC---------------------------------------
T ss_conf             25986999997899999999999728721135420135664---------------------------------------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEE--ECCC-
Q ss_conf             0021178999999966895100136764100012799999999999966988998134332040587589999--8678-
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVT--LSNG-  261 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~--t~~g-  261 (549)
                         .                              .......+.+.+...++.+++++.++.+...++.+....  ..++ 
T Consensus       226 ---~------------------------------~~~~~~~~~~~l~~~gi~i~~~~~v~~i~~~~~~~~~~~~~~~~~~  272 (478)
T 3dk9_A          226 ---F------------------------------DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR  272 (478)
T ss_dssp             ---S------------------------------CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTS
T ss_pred             ---C------------------------------CCHHHHHHHHHHHHCCCCEECCCEEEEEEECCCCEEEEEEECCCCC
T ss_conf             ---3------------------------------2024567899986424402226234789980794599999888881


Q ss_pred             -----CEEEECEEEEECCC
Q ss_conf             -----48970568993188
Q T0604           262 -----EEIKSRHVVLAVGH  275 (549)
Q Consensus       262 -----~~i~ad~VVlAtGh  275 (549)
                           .++++|.||+|+|.
T Consensus       273 ~~~~~~~~~~D~vi~a~G~  291 (478)
T 3dk9_A          273 LPVMTMIPDVDCLLWAIGR  291 (478)
T ss_dssp             CCEEEEEEEESEEEECSCE
T ss_pred             CCCCEEEEECCEEEECCCE
T ss_conf             3130246652889978341


No 203
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.17  E-value=0.00059  Score=41.54  Aligned_cols=99  Identities=22%  Similarity=0.322  Sum_probs=75.4

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             77677668987987999999999965990899835888321101000124354236023455413556521240455322
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...+++|+|||+|..|+.+|..|++.|.+|+|++|++.+..                             +         
T Consensus       173 ~~~pk~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~r~~~ll~-----------------------------~---------  214 (467)
T 1zk7_A          173 DTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-----------------------------E---------  214 (467)
T ss_dssp             SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-----------------------------S---------
T ss_pred             HHCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCC-----------------------------C---------
T ss_conf             33886499966765303445566404544289963035665-----------------------------4---------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCE
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867848
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE  263 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~  263 (549)
                       +                                  +.+...+.+.+++.|+.++++++|+.+..+++.+. +.+.++ +
T Consensus       215 -D----------------------------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~~~~~~-~  257 (467)
T 1zk7_A          215 -D----------------------------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFV-LTTTHG-E  257 (467)
T ss_dssp             -C----------------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEE-EEETTE-E
T ss_pred             -H----------------------------------HHHHHHHHHHHHCCEEEEECCCEEEEEEEECCEEE-EEECCC-C
T ss_conf             -5----------------------------------99999997521002034305726899974056399-983078-2


Q ss_pred             EEECEEEEECCCCH
Q ss_conf             97056899318876
Q T0604           264 IKSRHVVLAVGHSA  277 (549)
Q Consensus       264 i~ad~VVlAtGhsa  277 (549)
                      +.+|.|++|+|...
T Consensus       258 ~~~D~vl~AiG~~P  271 (467)
T 1zk7_A          258 LRADKLLVATGRTP  271 (467)
T ss_dssp             EEESEEEECSCEEE
T ss_pred             EECCEEEECCCCCC
T ss_conf             50277998227577


No 204
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreductase, structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.08  E-value=0.00053  Score=41.86  Aligned_cols=36  Identities=22%  Similarity=0.254  Sum_probs=32.1

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668987987999999999965990899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ..++|+|||+|..|+.+|..|++.|.+|++++++..
T Consensus       154 ~~k~vvIiG~G~~g~E~A~~l~~~g~~Vtli~~~~~  189 (335)
T 2a87_A          154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE  189 (335)
T ss_dssp             TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             799899988888999999999965998999981651


No 205
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.02  E-value=0.0011  Score=39.97  Aligned_cols=99  Identities=18%  Similarity=0.216  Sum_probs=77.3

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ..+++|+|||+|..|+.+|..|++.|.+|+++++.+.....                                       
T Consensus       165 ~~pk~vvVIGgG~ig~E~A~~l~~~G~~Vt~v~~~~~~~~~---------------------------------------  205 (450)
T 1ges_A          165 ALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS---------------------------------------  205 (450)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------------------------------------
T ss_pred             HCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC---------------------------------------
T ss_conf             28961999888416999999999759879985201356777---------------------------------------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                         .                              ...+...+.+.++..++.+++++.++.+...++....+.+.+|+++
T Consensus       206 ---~------------------------------~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~~~~~~~g~~~  252 (450)
T 1ges_A          206 ---F------------------------------DPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSE  252 (450)
T ss_dssp             ---S------------------------------CHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEE
T ss_pred             ---C------------------------------CHHHHHHHHHHHHHCCEEEECCEEEEEEEECCCCEEEEEECCCCEE
T ss_conf             ---6------------------------------5666567776654325342015058999975894377770799657


Q ss_pred             EECEEEEECCC
Q ss_conf             70568993188
Q T0604           265 KSRHVVLAVGH  275 (549)
Q Consensus       265 ~ad~VVlAtGh  275 (549)
                      .+|.|++|+|.
T Consensus       253 ~~d~vl~a~G~  263 (450)
T 1ges_A          253 TVDCLIWAIGR  263 (450)
T ss_dssp             EESEEEECSCE
T ss_pred             EEEEEEEECCC
T ss_conf             66799992475


No 206
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin-- NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocarbons catabolism; HET: FAD; 1.80A {Pseudomonas putida}
Probab=97.01  E-value=0.00092  Score=40.34  Aligned_cols=112  Identities=23%  Similarity=0.357  Sum_probs=84.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             67766898798799999999996599089983588832110100012435423602345541355652124045532200
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD  185 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~  185 (549)
                      ..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+..+.                   +                   
T Consensus       142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------~-------------------  183 (410)
T 3ef6_A          142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV-------------------L-------------------  183 (410)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH-------------------H-------------------
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCC-------------------C-------------------
T ss_conf             69889998988889999999986598677763165012455-------------------7-------------------


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEE
Q ss_conf             02117899999996689510013676410001279999999999996698899813433204058758999986784897
Q T0604           186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIK  265 (549)
Q Consensus       186 ~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~  265 (549)
                                                       ...+-+.+.+.+++.|++++++++++++..+ +++..+.+.+|++++
T Consensus       184 ---------------------------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~~~~v~~~~g~~i~  229 (410)
T 3ef6_A          184 ---------------------------------GRRIGAWLRGLLTELGVQVELGTGVVGFSGE-GQLEQVMASDGRSFV  229 (410)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEECS-SSCCEEEETTSCEEE
T ss_pred             ---------------------------------CHHHHHHHHHHHHHCCEEEEECCEEEEEECC-CCEEEEECCCCCEEE
T ss_conf             ---------------------------------7778899999886267499957578899258-847999848998898


Q ss_pred             ECEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             05689931887679999999669711
Q T0604           266 SRHVVLAVGHSARDTFEMLHERGVYM  291 (549)
Q Consensus       266 ad~VVlAtGhsard~~~~l~~~Gi~~  291 (549)
                      ||.||+|+|......  ++...|+..
T Consensus       230 ~D~vv~a~G~~p~~~--~~~~~gl~~  253 (410)
T 3ef6_A          230 ADSALICVGAEPADQ--LARQAGLAC  253 (410)
T ss_dssp             CSEEEECSCEEECCH--HHHHTTCCB
T ss_pred             ECEEEEEECCCCCCH--HHHHCCEEC
T ss_conf             299999226526854--677467462


No 207
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ binding, reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori 26695} PDB: 2q0k_A* 3ish_A*
Probab=97.00  E-value=0.00089  Score=40.41  Aligned_cols=44  Identities=23%  Similarity=0.359  Sum_probs=35.6

Q ss_pred             CCCCCCCCCCCCEEECCCCCHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88743026898542012353357-8999999999999999999997
Q T0604           500 GKDFQSVNLKGFYPAGEGAGYAG-GILSAGIDGIKVAEAVARDIVA  544 (549)
Q Consensus       500 ~~tleS~~i~GLY~~GEgaGyag-GI~saa~~G~~~a~~i~~~~~~  544 (549)
                      |++||+ +++|+|.||+.+-+.. =+++|+-+|-.||..|.++++.
T Consensus       266 d~~~~T-S~~gVfA~GDv~~~~~~~~~~A~~~G~~AA~~i~~yl~~  310 (311)
T 2q0l_A          266 DFSMKT-NVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH  310 (311)
T ss_dssp             CTTCBC-SSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCC-CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999703-899999999797687629999999999999999999861


No 208
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.96  E-value=0.0077  Score=34.54  Aligned_cols=182  Identities=19%  Similarity=0.235  Sum_probs=91.9

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCC--CCCCCCCCCCH----H-------HHHHHHCCC
Q ss_conf             677668987987999999999965--99089983588832110100--01243542360----2-------345541355
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQM--GFNPIIVERGKEVRERTKDT--FGFWRKRTLNP----E-------SNVQFGEGG  170 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~--G~~V~VlErg~~vg~r~~~~--~~~~~~~~~~~----~-------~n~~~g~gg  170 (549)
                      ..-.|||||+|--|-.||++|.+.  +.+.+++|+|.-+.+....+  .+.|..-.+-.    +       ..-.||.++
T Consensus        35 ~aydvvv~gagrmgaacalylrqlap~~rlllveegglpneegatilapgvwta~d~pag~eaea~wvr~ql~~~fg~~~  114 (405)
T 3c4n_A           35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGK  114 (405)
T ss_dssp             CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSC
T ss_pred             CCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             66647997777521579999997688754898614898875785565464031354751467788999999988636776


Q ss_pred             CCCCCCHHHHH----HHHHHCCCHHHHHHHHHHCCC--CCCCCCCCC--CCEECCHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf             65212404553----220002117899999996689--510013676--4100012799999999999966988998134
Q T0604           171 AGTFSDGKLYS----QVKDPNFYGRKVITEFVEAGA--PEEILYVSK--PHIGTFKLVTMIEKMRATIIELGGEIRFSTR  242 (549)
Q Consensus       171 ag~fsdgkl~t----~~~~~~~~~~~vl~~~~~~Ga--~~~i~~~~k--ph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~  242 (549)
                      .-+|.+-.|..    .-.+......+.+..|-+.-.  ....+-..+  |...|-+...+.-...+++...|.....+++
T Consensus       115 t~~~~~rpll~ll~a~e~~g~~~t~d~la~fpea~~l~d~a~lp~arvdp~a~tyrpgaval~~aqqai~qga~lllntr  194 (405)
T 3c4n_A          115 TLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTR  194 (405)
T ss_dssp             CCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCE
T ss_pred             CCEECCCHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHCCCCCCCCEECCHHHHCCCCCHHHHHHHHHHHHHCCCCEECCC
T ss_conf             20167612654314323688574376665363555432703496112284663368508999988999862632014153


Q ss_pred             CCCC---------EECCCEEEEEEECCCCEEEECEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             3320---------405875899998678489705689931887679999999669711
Q T0604           243 VDDL---------HMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYM  291 (549)
Q Consensus       243 V~~i---------~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsard~~~~l~~~Gi~~  291 (549)
                      .+-+         ...|-  ..|++....++.+..||+|.|..+.  +..-+++|++.
T Consensus       195 a~lvpggvrl~rltvtnt--hqivthet~~l~a~~viva~ga~gp--~~aeh~lglht  248 (405)
T 3c4n_A          195 AELVPGGVRLHRLTVTNT--HQIVVHETRQIRAGVIIVAAGAAGP--ALVEQGLGLHT  248 (405)
T ss_dssp             EEEETTEEEEECBCC---------CBCCEEEEEEEEEECCGGGHH--HHHHHHHCCCC
T ss_pred             EEECCCCEEEEEEEEECC--EEEEEEEEEEECCCEEEEECCCCCC--HHHHCCCCCCH
T ss_conf             055168258889986233--3678521006505459998168983--55431346310


No 209
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate biosynthesis, PSI-2; 1.90A {Methylococcus capsulatus}
Probab=96.92  E-value=0.001  Score=40.07  Aligned_cols=35  Identities=34%  Similarity=0.542  Sum_probs=31.8

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             67766898798799999999996599089983588
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      |.-||.|+|+|.-|.+.|..|++.|++|+++.|+.
T Consensus         1 m~MkI~I~GaGaiG~~~a~~L~~aG~~Vtli~R~~   35 (320)
T 3i83_A            1 MSLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD   35 (320)
T ss_dssp             --CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
T ss_conf             99889998979999999999996899089997856


No 210
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.86  E-value=0.00099  Score=40.12  Aligned_cols=36  Identities=19%  Similarity=0.196  Sum_probs=32.5

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      +++|.|||+|.-|+..|..|+++|++|++++|.+..
T Consensus         4 ~k~iaViG~G~~G~~~A~~La~~G~~V~~~~r~~~~   39 (359)
T 1bg6_A            4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQR   39 (359)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             998999898989999999999789948999899999


No 211
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodanese, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.79  E-value=0.0019  Score=38.38  Aligned_cols=113  Identities=19%  Similarity=0.217  Sum_probs=70.2

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             76776689879879999999999659--9089983588832110100012435423602345541355652124045532
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQ  182 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~  182 (549)
                      ..+||||||||||||+.||..|++.|  .+|+|||+++...        +..|+.       ....++  ...       
T Consensus        34 ~~sKkVVIIGgG~AGlsaA~~lrr~g~~~~Vtliek~~~~~--------~~~~~l-------p~~i~g--~~~-------   89 (588)
T 3ics_A           34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--------FANCGL-------PYYIGG--VIT-------   89 (588)
T ss_dssp             CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--------BCGGGH-------HHHHTT--SSC-------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC--------CCCCHH-------HHHHCC--CCC-------
T ss_conf             89985999898899999999998179888289993899777--------887634-------688567--778-------


Q ss_pred             HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC--
Q ss_conf             200021178999999966895100136764100012799999999999966988998134332040587589999867--
Q T0604           183 VKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN--  260 (549)
Q Consensus       183 ~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~--  260 (549)
                                          ..+.+..              ........+.+++++.+++|++|..++..|.......  
T Consensus        90 --------------------~~~~l~~--------------~~~~~~~~~~~i~v~~~~eV~~ID~~~k~V~~~~~~t~~  135 (588)
T 3ics_A           90 --------------------ERQKLLV--------------QTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNE  135 (588)
T ss_dssp             --------------------CGGGGBS--------------SCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCC
T ss_pred             --------------------CHHHHHH--------------HHHHHHHHHCCCEEEECCEEEEEECCCCEEEEECCCCCC
T ss_conf             --------------------7798865--------------469999987596899678899998788889993277774


Q ss_pred             CCEEEECEEEEECCC
Q ss_conf             848970568993188
Q T0604           261 GEEIKSRHVVLAVGH  275 (549)
Q Consensus       261 g~~i~ad~VVlAtGh  275 (549)
                      +.++.+|.+|||||.
T Consensus       136 ~~~~~YD~LVIATGs  150 (588)
T 3ics_A          136 TYNEAYDVLILSPGA  150 (588)
T ss_dssp             EEEEECSEEEECCCE
T ss_pred             EEEEECCEEEEECCC
T ss_conf             589866899992461


No 212
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=96.76  E-value=0.0022  Score=38.00  Aligned_cols=59  Identities=17%  Similarity=0.095  Sum_probs=45.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             56554226676656677788776776689879879999999999659908998358883
Q T0604            84 NDPHVRQTPDMEYKFVAKAPENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ++..+....+.-|-.....+.+..+||.|||.|.-|.-.|..|++.|++|.+++|.+..
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~kkIg~IGlG~MG~~ma~~L~~~G~~v~v~dr~~~k   65 (316)
T 2uyy_A            7 HSSGVDLGTENLYFQSMGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEK   65 (316)
T ss_dssp             ------------------CCCCCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGG
T ss_pred             CCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf             54556657540010334568999996999801798999999999889979998299999


No 213
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.72  E-value=0.0025  Score=37.62  Aligned_cols=98  Identities=22%  Similarity=0.270  Sum_probs=71.4

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ...++++|||+|+.|+.+|..|.+.|.+|+++|+++.+....                           + +        
T Consensus       143 ~~~~~v~VvGgG~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~---------------------------~-~--------  186 (408)
T 2gqw_A          143 RPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA---------------------------A-P--------  186 (408)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT---------------------------S-C--------
T ss_pred             CCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCHHHCCC---------------------------C-C--------
T ss_conf             689669998983565344552045683799951444111234---------------------------7-6--------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                                                         ....+.+...+.+.|+++++++.|+.+...     .+.+.+|+++
T Consensus       187 -----------------------------------~~~~~~~~~~~~~~gv~~~~~~~v~~~~~~-----~~~~~~g~~i  226 (408)
T 2gqw_A          187 -----------------------------------ATLADFVARYHAAQGVDLRFERSVTGSVDG-----VVLLDDGTRI  226 (408)
T ss_dssp             -----------------------------------HHHHHHHHHHHHHTTCEEEESCCEEEEETT-----EEEETTSCEE
T ss_pred             -----------------------------------HHHHHHHHHHHHHCCEEEEECCEEEEEEEE-----EEEECCCCEE
T ss_conf             -----------------------------------888999999888558699951189876410-----5885048561


Q ss_pred             EECEEEEECCCCHH
Q ss_conf             70568993188767
Q T0604           265 KSRHVVLAVGHSAR  278 (549)
Q Consensus       265 ~ad~VVlAtGhsar  278 (549)
                      ++|.||+|+|....
T Consensus       227 ~~D~vi~a~G~~p~  240 (408)
T 2gqw_A          227 AADMVVVGIGVLAN  240 (408)
T ss_dssp             ECSEEEECSCEEEC
T ss_pred             CCCEEEEEECCCCC
T ss_conf             36889998362578


No 214
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.72  E-value=0.0034  Score=36.80  Aligned_cols=49  Identities=22%  Similarity=0.192  Sum_probs=37.5

Q ss_pred             ECCC-CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2048-8743026898542012353357899999999999999999999752
Q T0604           497 IKRG-KDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIVAAM  546 (549)
Q Consensus       497 i~r~-~tleS~~i~GLY~~GEgaGyagGI~saa~~G~~~a~~i~~~~~~~~  546 (549)
                      |..| .+|+ ++++|+|.+|+...=+..++.|.-+|-+||+.|-++|+.+.
T Consensus       398 i~vd~~~~~-Ts~pgVfA~GD~~~G~~~vv~Ai~~G~~aA~~I~~yL~~~~  447 (456)
T 2vdc_G          398 LLVDHRTKM-TNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKA  447 (456)
T ss_dssp             BCCCTTTCB-CSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCC-CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             875899986-79999999457666855999999999999999999971566


No 215
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.66  E-value=0.0025  Score=37.57  Aligned_cols=110  Identities=15%  Similarity=0.251  Sum_probs=69.1

Q ss_pred             CEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             6689879879999999999659--90899835888321101000124354236023455413556521240455322000
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      ||||||||||||.||..|++.|  .+|+|+|+++.+.        +.+|+.       ....++  .+.         ..
T Consensus         2 KVvIIG~G~AGl~aA~~l~~~~~~~~V~lie~~~~~~--------~~~~~~-------~~~~~~--~~~---------~~   55 (452)
T 2cdu_A            2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNIS--------FLSCGI-------ALYLGK--EIK---------NN   55 (452)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCC--------BCGGGH-------HHHHTT--CBG---------GG
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC--------CCCCCH-------HHHHCC--CCC---------CC
T ss_conf             6999997899999999998349698389990899767--------777611-------366547--756---------54


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEE--ECCCCEE
Q ss_conf             21178999999966895100136764100012799999999999966988998134332040587589999--8678489
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVT--LSNGEEI  264 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~--t~~g~~i  264 (549)
                      .               +....+      .          ..+.+.+.+++++.+++|+.|..++..+..-.  +.++.++
T Consensus        56 ~---------------~~~~~~------~----------~~~~~~~~~i~v~~~~~V~~Id~~~k~V~~~~~~~~~~~~i  104 (452)
T 2cdu_A           56 D---------------PRGLFY------S----------SPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTE  104 (452)
T ss_dssp             C---------------GGGGBS------C----------CHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEE
T ss_pred             C---------------HHHHHH------H----------CHHHHHHCCCEEEECCEEEEEECCCCEEEEEECCCCCCEEE
T ss_conf             8---------------788865------5----------79999977989995887999987887899942355542048


Q ss_pred             EECEEEEECCC
Q ss_conf             70568993188
Q T0604           265 KSRHVVLAVGH  275 (549)
Q Consensus       265 ~ad~VVlAtGh  275 (549)
                      .+|.+|+|||.
T Consensus       105 ~yd~lViAtG~  115 (452)
T 2cdu_A          105 AYDKLIMTTGS  115 (452)
T ss_dssp             ECSEEEECCCE
T ss_pred             EEEEEEECCCC
T ss_conf             84156532566


No 216
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.50A {Geobacter metallireducens gs-15}
Probab=96.65  E-value=0.0015  Score=38.92  Aligned_cols=35  Identities=26%  Similarity=0.462  Sum_probs=31.1

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             67766898798799999999996599089983588
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      |+-||.|+|+|.-|.+.|..|++.|++|+++-|+.
T Consensus         1 m~MkI~IiGaGaiG~~~a~~L~~aG~~Vtlv~R~~   35 (312)
T 3hn2_A            1 MSLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD   35 (312)
T ss_dssp             ---CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
T ss_conf             99889998959999999999984699459996876


No 217
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.63  E-value=0.00088  Score=40.44  Aligned_cols=33  Identities=18%  Similarity=0.290  Sum_probs=30.9

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             766898798799999999996599089983588
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      +||.|||+|.-|+..|..|++.|++|+++++..
T Consensus        16 ~KI~ViGaG~~G~~~a~~La~~G~~V~~~d~~~   48 (366)
T 1evy_A           16 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNE   48 (366)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             779998888999999999997899699998999


No 218
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structural genomics; 2.00A {Ralstonia solanacearum MOLK2}
Probab=96.63  E-value=0.0022  Score=38.02  Aligned_cols=33  Identities=30%  Similarity=0.453  Sum_probs=29.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             766898798799999999996599089983588
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .||+|||+|.-|.+.|..|++.|.+|+++-|++
T Consensus         4 ~KI~IiGaGaiG~~~a~~L~~~G~~Vtlv~r~~   36 (335)
T 3ghy_A            4 TRICIVGAGAVGGYLGARLALAGEAINVLARGA   36 (335)
T ss_dssp             CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEEEHH
T ss_conf             889998876999999999996899089997489


No 219
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, PSI; HET: MSE; 2.00A {Enterococcus faecalis V583}
Probab=96.63  E-value=0.0021  Score=38.13  Aligned_cols=34  Identities=21%  Similarity=0.323  Sum_probs=31.0

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             7766898798799999999996599089983588
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      +-||+|+|+|.-|.+.|..|++.|++|+++.|++
T Consensus         3 ~MkI~IiGaGaiG~~~a~~La~~G~~Vtlv~r~~   36 (316)
T 2ew2_A            3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP   36 (316)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
T ss_conf             8899998928999999999996899789997888


No 220
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.62  E-value=0.0014  Score=39.25  Aligned_cols=40  Identities=13%  Similarity=0.084  Sum_probs=32.5

Q ss_pred             CCCCCCEEECCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             268985420123-5335789999999999999999999975
Q T0604           506 VNLKGFYPAGEG-AGYAGGILSAGIDGIKVAEAVARDIVAA  545 (549)
Q Consensus       506 ~~i~GLY~~GEg-aGyagGI~saa~~G~~~a~~i~~~~~~~  545 (549)
                      +.++|||+|||. +.+-|+|-.|...|++||+.|.+++..+
T Consensus       448 ~p~~~l~~aG~~~s~~~g~~~gA~~SG~~aA~~I~~r~~~~  488 (489)
T 2jae_A          448 EPVDKIYFAGDHLSNAIAWQHGALTSARDVVTHIHERVAQE  488 (489)
T ss_dssp             SCBTTEEECSGGGBSSTTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99898999978715899828999999999999999877540


No 221
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus HB8} PDB: 2eq7_A*
Probab=96.57  E-value=0.0037  Score=36.52  Aligned_cols=36  Identities=36%  Similarity=0.548  Sum_probs=34.1

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             668987987999999999965990899835888321
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      .|||||||||||.||+.|++.|++|+|+|+.+.+|+
T Consensus         3 DVvIIG~G~AGl~aA~~l~~~G~~V~viE~~~~lGG   38 (455)
T 2yqu_A            3 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGG   38 (455)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             599999888999999999968897999965899785


No 222
>1yqz_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.54A {Staphylococcus aureus}
Probab=96.55  E-value=0.003  Score=37.07  Aligned_cols=93  Identities=15%  Similarity=0.282  Sum_probs=71.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .++|+|||+|+.|+.+|..|++.|.+|+++++++.....                            +.          .
T Consensus       148 ~~~vviiGgG~~g~e~A~~l~~~~~~V~l~~~~~~~~~~----------------------------~~----------~  189 (438)
T 1yqz_A          148 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL----------------------------MD----------A  189 (438)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT----------------------------SC----------G
T ss_pred             CCEEEEEEEEEECCCCCCCEECCCCCCCEEECCCCCCCC----------------------------CH----------H
T ss_conf             550578631100012221100032321001100022332----------------------------01----------3


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEE
Q ss_conf             21178999999966895100136764100012799999999999966988998134332040587589999867848970
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKS  266 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~a  266 (549)
                                                        ...+.+.+.+++.|++++++++|+.+..+     .+.+.+|+++++
T Consensus       190 ----------------------------------~~~~~l~~~l~~~gI~i~~~~~v~~i~~~-----~v~~~~g~~~~~  230 (438)
T 1yqz_A          190 ----------------------------------DMNQPILDELDKREIPYRLNEEINAINGN-----EITFKSGKVEHY  230 (438)
T ss_dssp             ----------------------------------GGGHHHHHHHHHTTCCEEESCCEEEEETT-----EEEETTSCEEEC
T ss_pred             ----------------------------------HHHHHHHHHCCCCEEEEEECCEEEEEEEC-----CCCCCCCCCCCC
T ss_conf             ----------------------------------45555542112340699857677776402-----332211122223


Q ss_pred             CEEEEECCCC
Q ss_conf             5689931887
Q T0604           267 RHVVLAVGHS  276 (549)
Q Consensus       267 d~VVlAtGhs  276 (549)
                      |.|++|+|..
T Consensus       231 D~vi~a~G~~  240 (438)
T 1yqz_A          231 DMIIEGVGTH  240 (438)
T ss_dssp             SEEEECCCEE
T ss_pred             CCCEEECCCE
T ss_conf             3422310631


No 223
>2g1u_A Hypothetical protein TM1088A; , structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.55  E-value=0.0066  Score=34.98  Aligned_cols=42  Identities=12%  Similarity=0.281  Sum_probs=35.9

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             877677668987987999999999965990899835888321
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      .....++|+|+|+|.-|...|-.|.+.|.+|+++|+.+..-.
T Consensus        15 ~~~k~~~IiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~   56 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFH   56 (155)
T ss_dssp             --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGG
T ss_pred             HHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf             442598499989999999999999978991999978888833


No 224
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B*
Probab=96.54  E-value=0.0017  Score=38.74  Aligned_cols=38  Identities=16%  Similarity=0.025  Sum_probs=32.5

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCCC
Q ss_conf             67766898798799999999996-599089983588832
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGKEVR  143 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~-~G~~V~VlErg~~vg  143 (549)
                      |.-||.|+|||..|+..|..|++ .|++|.++.|.+.--
T Consensus         1 m~MkI~VlGaG~~G~~~A~~La~~aG~~V~l~~r~~~~~   39 (404)
T 3c7a_A            1 MTVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEA   39 (404)
T ss_dssp             -CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf             987799988398999999999956998589996898999


No 225
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A*
Probab=96.48  E-value=0.0046  Score=35.94  Aligned_cols=103  Identities=21%  Similarity=0.253  Sum_probs=77.7

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ...++++|||+|+.|+.+|..|++.|.+|+++|+.+.+..+.                           +          
T Consensus       147 ~~~~~vvivGgG~ig~e~A~~l~~~g~~v~~~~~~~~~l~~~---------------------------~----------  189 (431)
T 1q1r_A          147 IADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV---------------------------T----------  189 (431)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT---------------------------S----------
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC---------------------------C----------
T ss_conf             258636999567002433999985798799953554121001---------------------------6----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECC--CEEEEEEECCCC
Q ss_conf             002117899999996689510013676410001279999999999996698899813433204058--758999986784
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGE  262 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~--g~v~gV~t~~g~  262 (549)
                                                        ...+...+...+++.|++++++++|+.+..++  .....+.+.+|+
T Consensus       190 ----------------------------------~~~~~~~~~~~~~~~gv~~~~~~~V~~~~~~~~~~~~~~~~~~~g~  235 (431)
T 1q1r_A          190 ----------------------------------APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGT  235 (431)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSC
T ss_pred             ----------------------------------CHHHHHHHHHHHHHCCEEEEECCEEEEEEEECCCEEEEEEECCCCC
T ss_conf             ----------------------------------4567899999998658478825179999831232048999878995


Q ss_pred             EEEECEEEEECCCCHH
Q ss_conf             8970568993188767
Q T0604           263 EIKSRHVVLAVGHSAR  278 (549)
Q Consensus       263 ~i~ad~VVlAtGhsar  278 (549)
                      +++||.||.|+|....
T Consensus       236 ~i~~D~vi~a~G~~Pn  251 (431)
T 1q1r_A          236 RLPADLVIAGIGLIPN  251 (431)
T ss_dssp             EEECSEEEECCCEEEC
T ss_pred             EEEECEEEECCCCCCC
T ss_conf             9982999989874106


No 226
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, FAD, flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.43  E-value=0.0043  Score=36.10  Aligned_cols=106  Identities=18%  Similarity=0.301  Sum_probs=65.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             7766898798799999999996599--08998358883211010001243542360234554135565212404553220
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      +.+|||||+||||+.||..|++.|.  +|+|+|+.+...        +.++...     ..+..   +..          
T Consensus         1 n~~VvIIGgG~AGl~aA~~lr~~~~~~~V~li~~~~~~~--------y~r~~l~-----~~~~~---~~~----------   54 (404)
T 3fg2_P            1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP--------YQRPPLS-----KAYLK---SGG----------   54 (404)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS--------BCSGGGG-----TGGGG---SCC----------
T ss_pred             CCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC--------CCCCCCH-----HHHHC---CCC----------
T ss_conf             999999898699999999997169668299996888765--------5676356-----99864---888----------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                                       .+..+.+.         .       .+.+++.|++++. .+|+.+..+...   |++.+|+++
T Consensus        55 -----------------~~~~~~~~---------~-------~~~~~~~~i~~~~-~~v~~i~~~~~~---v~~~~g~~~   97 (404)
T 3fg2_P           55 -----------------DPNSLMFR---------P-------EKFFQDQAIELIS-DRMVSIDREGRK---LLLASGTAI   97 (404)
T ss_dssp             -----------------CTTSSBSS---------C-------HHHHHHTTEEEEC-CCEEEEETTTTE---EEESSSCEE
T ss_pred             -----------------CHHHHHCC---------H-------HHHHHHCCCEEEE-EEEEEEECCCCE---EEECCCCEE
T ss_conf             -----------------88996229---------6-------9999868979996-079998479758---998899799


Q ss_pred             EECEEEEECCC
Q ss_conf             70568993188
Q T0604           265 KSRHVVLAVGH  275 (549)
Q Consensus       265 ~ad~VVlAtGh  275 (549)
                      .+|++|+|||.
T Consensus        98 ~yd~lviAtGs  108 (404)
T 3fg2_P           98 EYGHLVLATGA  108 (404)
T ss_dssp             ECSEEEECCCE
T ss_pred             EECEEEECCCC
T ss_conf             70328984576


No 227
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.31  E-value=0.0042  Score=36.16  Aligned_cols=36  Identities=22%  Similarity=0.440  Sum_probs=32.3

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668987987999999999965990899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |+.+|.|||.|.-||.+|..+|+.|++|+.+|-++.
T Consensus         1 m~mkI~ViGlG~vGl~~a~~~a~~g~~V~g~D~~~~   36 (450)
T 3gg2_A            1 MSLDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN   36 (450)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
T ss_conf             997699989877799999999967991899989999


No 228
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha JMP134}
Probab=96.30  E-value=0.0034  Score=36.80  Aligned_cols=35  Identities=26%  Similarity=0.508  Sum_probs=31.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             77668987987999999999965990899835888
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .-||.|+|+|.-|.+.|..|+++|++|+++-|+..
T Consensus        19 ~MkI~IlGaGaiG~~~A~~L~~aG~~Vtlv~R~~~   53 (318)
T 3hwr_A           19 GMKVAIMGAGAVGCYYGGMLARAGHEVILIARPQH   53 (318)
T ss_dssp             -CEEEEESCSHHHHHHHHHHHHTTCEEEEECCHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECHHH
T ss_conf             89899999279999999999956990899970799


No 229
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.29  E-value=0.0037  Score=36.51  Aligned_cols=36  Identities=28%  Similarity=0.322  Sum_probs=33.0

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ++++||+|.|..|...|-.|.+.|++|+++|+.+..
T Consensus         6 ~~~~iIiG~G~~G~~la~~L~~~g~~vvviD~d~~~   41 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEK   41 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             786999888899999999999889909999687899


No 230
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.28  E-value=0.0053  Score=35.56  Aligned_cols=36  Identities=19%  Similarity=0.089  Sum_probs=32.3

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             668987987999999999965990899835888321
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      ||+|+|+|.-|.+-|..|++.|++|+++.|++....
T Consensus         2 kI~IiGaGaiG~~~a~~L~~~G~dV~l~~R~~~~~~   37 (291)
T 1ks9_A            2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (291)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEEECHHHHH
T ss_conf             899999179999999999978992799972735532


No 231
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, PSI-2; 2.30A {Staphylococcus aureus subsp}
Probab=96.24  E-value=0.0038  Score=36.49  Aligned_cols=36  Identities=19%  Similarity=0.217  Sum_probs=32.3

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668987987999999999965990899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |+-||.|||+|.-|.+-|..|++.|.+|+++.|...
T Consensus         1 m~MkI~IiGaGaiG~~~a~~L~~~g~~Vtl~~r~~~   36 (294)
T 3g17_A            1 MSLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAK   36 (294)
T ss_dssp             --CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
T ss_conf             999999999689999999999955992799965999


No 232
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.21  E-value=0.0046  Score=35.92  Aligned_cols=37  Identities=22%  Similarity=0.251  Sum_probs=34.3

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             7767766898798799999999996599089983588
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      +.|+++|+|.|+|.-|-..+-.|.++|++|+++.|..
T Consensus         2 ~~M~~~vlI~GaGfIGs~Lv~~L~~~G~~V~~l~R~~   38 (286)
T 3ius_A            2 NAMTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP   38 (286)
T ss_dssp             ---CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred             CCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             9899848998862999999999997899899994881


No 233
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genomics, joint center for structural genomics, JCSG; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima MSB8}
Probab=96.18  E-value=0.0037  Score=36.53  Aligned_cols=40  Identities=28%  Similarity=0.380  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             8776776689879879999999999659908998358883
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .+.|+.+|.|||||..|...|..|++.|.+|.++.|.+..
T Consensus        10 ~~~m~mKI~ViGaGawGtAlA~~la~ng~~V~l~~r~~~~   49 (335)
T 1z82_A           10 HHHMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEI   49 (335)
T ss_dssp             ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             4645454999994999999999999789958999718999


No 234
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.17  E-value=0.05  Score=29.42  Aligned_cols=24  Identities=29%  Similarity=0.318  Sum_probs=21.1

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHC
Q ss_conf             677668987987999999999965
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQM  129 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~  129 (549)
                      ..++|+|||+|-.+|-+|..|++.
T Consensus       146 ~gk~VvVIGgGnvA~D~ar~l~r~  169 (456)
T 1lqt_A          146 SGARAVVIGNGNVALDVARILLTD  169 (456)
T ss_dssp             CSSEEEEECCSHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCCHHHHHHHHCCC
T ss_conf             787589977775002032120034


No 235
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, protein structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.15  E-value=0.008  Score=34.43  Aligned_cols=40  Identities=15%  Similarity=0.418  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             8776776689879879999999999659908998358883
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      +.++..+|||+|+|.-|...|-.|.+.|.+|+++|+.+..
T Consensus         3 ~vdl~~HiiIiG~g~~g~~v~~~L~~~~~~v~vId~d~~~   42 (140)
T 3fwz_A            3 AVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTR   42 (140)
T ss_dssp             CCCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHH
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf             6267799999896889999999999779988999898899


No 236
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.13  E-value=0.005  Score=35.69  Aligned_cols=37  Identities=24%  Similarity=0.372  Sum_probs=32.9

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6776689879879999999999659908998358883
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      +-++|.|||+|.-|---|..++.+|++|+++|+.+..
T Consensus        14 ~I~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~   50 (302)
T 1f0y_A           14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDI   50 (302)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf             5328999896989999999999289967999898899


No 237
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.12  E-value=0.0071  Score=34.76  Aligned_cols=35  Identities=14%  Similarity=0.130  Sum_probs=31.8

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             77668987987999999999965990899835888
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      +-||.|||+|.-|...|..|+++|++|+++++.+.
T Consensus        19 ~MKI~VIG~G~mG~~lA~~L~~~Gh~V~v~~r~~~   53 (209)
T 2raf_A           19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ   53 (209)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf             88899989779999999999977996798459989


No 238
>3dtt_A NADP oxidoreductase; YP_830112.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.12  E-value=0.006  Score=35.24  Aligned_cols=34  Identities=26%  Similarity=0.329  Sum_probs=31.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7668987987999999999965990899835888
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .||.|||+|.-|...|..|++.|++|++++|.+.
T Consensus        20 MKIaVIGaG~mG~alA~~La~aG~~V~l~~R~~~   53 (245)
T 3dtt_A           20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK   53 (245)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf             9899999769999999999987997999839999


No 239
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, FAD, NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.11  E-value=0.01  Score=33.70  Aligned_cols=99  Identities=22%  Similarity=0.264  Sum_probs=77.9

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             77668987987999999999965990899835888321101000124354236023455413556521240455322000
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP  186 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~~~  186 (549)
                      .++++|+|+|+.|+.+|..+++.|.+|+++++.+....+.                           + +          
T Consensus       145 ~~~~viiG~g~~~~e~A~~~~~~g~~Vt~i~~~~~~l~~~---------------------------~-~----------  186 (384)
T 2v3a_A          145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL---------------------------L-H----------  186 (384)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT---------------------------S-C----------
T ss_pred             CCEEEEECCCCEEEHHHHHHCCCCCCEEEEEECCCCCCCC---------------------------C-C----------
T ss_conf             9769998465000001232114675037887446334442---------------------------3-2----------


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEE
Q ss_conf             21178999999966895100136764100012799999999999966988998134332040587589999867848970
Q T0604           187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKS  266 (549)
Q Consensus       187 ~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~a  266 (549)
                                                       +.+...+.+.+++.++++++++.+..+..+++.+ .+++.+|++++|
T Consensus       187 ---------------------------------~~~~~~~~~~~~~~gi~~~~~~~v~~~~~~~~~~-~v~~~~g~~i~~  232 (384)
T 2v3a_A          187 ---------------------------------PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGL-EAHLSDGEVIPC  232 (384)
T ss_dssp             ---------------------------------HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEE-EEEETTSCEEEE
T ss_pred             ---------------------------------CCCCCCCCCHHHCCCEEECCCCEEEEEEECCCEE-EEEECCCCEEEE
T ss_conf             ---------------------------------2221010001320666751485589999459879-999759959973


Q ss_pred             CEEEEECCCCH
Q ss_conf             56899318876
Q T0604           267 RHVVLAVGHSA  277 (549)
Q Consensus       267 d~VVlAtGhsa  277 (549)
                      |.|++|+|.+.
T Consensus       233 D~vi~a~G~~p  243 (384)
T 2v3a_A          233 DLVVSAVGLRP  243 (384)
T ss_dssp             SEEEECSCEEE
T ss_pred             EEEEEEECCCC
T ss_conf             46999656436


No 240
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A*
Probab=96.08  E-value=0.0036  Score=36.62  Aligned_cols=41  Identities=22%  Similarity=0.392  Sum_probs=31.4

Q ss_pred             CCCCCCCEEECCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             02689854201235--335789999999999999999999975
Q T0604           505 SVNLKGFYPAGEGA--GYAGGILSAGIDGIKVAEAVARDIVAA  545 (549)
Q Consensus       505 S~~i~GLY~~GEga--GyagGI~saa~~G~~~a~~i~~~~~~~  545 (549)
                      ...++|||||||.+  +|-|-+..|...|++||+.|++++...
T Consensus       619 ~t~~~~L~fAGe~t~~~~~~tv~GA~~SG~raA~~I~~~~~g~  661 (662)
T 2z3y_A          619 PQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGA  661 (662)
T ss_dssp             --CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC-
T ss_pred             CCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             6877858998147268997879999999999999999972589


No 241
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, cytoplasm, oxidoreductase, phospholipid biosynthesis, structural genomics; HET: EPE; 2.10A {Coxiella burnetii rsa 493}
Probab=96.01  E-value=0.0072  Score=34.73  Aligned_cols=39  Identities=23%  Similarity=0.279  Sum_probs=33.4

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776776689879879999999999659908998358883
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .+.+.+|.|+|||.-|...|..|++.|.+|.++.|.+..
T Consensus        26 ~~~k~kI~ViGaGawGtAlA~~La~ng~~V~l~~r~~~~   64 (356)
T 3k96_A           26 EPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDH   64 (356)
T ss_dssp             -CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHH
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECHHH
T ss_conf             778988999895999999999999789978999828999


No 242
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.00  E-value=0.0066  Score=34.97  Aligned_cols=38  Identities=18%  Similarity=0.366  Sum_probs=33.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             77668987987999999999965990899835888321
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      .-||+|+|+|.-|...|..|.+.|++|+++|+.+..-.
T Consensus         4 ~m~ViI~G~G~~G~~la~~L~~~~~~V~vId~d~~~~~   41 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICK   41 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHHHH
T ss_conf             99999989899999999999977996799850156665


No 243
>3itj_A Thioredoxin reductase 1; cytoplasm, disulfide bond, FAD, flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-active center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae W303} PDB: 3d8x_A*
Probab=95.89  E-value=0.0055  Score=35.47  Aligned_cols=45  Identities=13%  Similarity=0.176  Sum_probs=35.1

Q ss_pred             CCCCCCCCCCCCCEEECCCCCHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             488743026898542012353357-8999999999999999999997
Q T0604           499 RGKDFQSVNLKGFYPAGEGAGYAG-GILSAGIDGIKVAEAVARDIVA  544 (549)
Q Consensus       499 r~~tleS~~i~GLY~~GEgaGyag-GI~saa~~G~~~a~~i~~~~~~  544 (549)
                      .|++|++ ++||+|.||+.+++-. -+..|+-+|-.||..|.++|..
T Consensus       291 vd~~~~T-s~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~a~~~l~~  336 (338)
T 3itj_A          291 VPGSSLT-SVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTS  336 (338)
T ss_dssp             CTTSSBC-SSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8998504-999999999873787709999999999999999999984


No 244
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.84  E-value=0.047  Score=29.59  Aligned_cols=33  Identities=24%  Similarity=0.521  Sum_probs=30.7

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             668987987999999999965990899835888
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .|||||||||||.||+.|+++|++|+|||+++.
T Consensus        18 DVvIIGgG~AGl~aA~~l~~~g~~V~liek~~~   50 (319)
T 3cty_A           18 DVVIVGAGAAGFSAAVYAARSGFSVAILDKAVA   50 (319)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESSST
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             799989889999999999978998899956887


No 245
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide formyl transferase; purine ribonucleotide biosynthesis, PURT; HET: ADP; 1.70A {Pyrococcus horikoshii OT3} PDB: 2czg_A*
Probab=95.82  E-value=0.018  Score=32.16  Aligned_cols=42  Identities=17%  Similarity=0.322  Sum_probs=35.0

Q ss_pred             CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             788776776689879879999999999659908998358883
Q T0604           101 KAPENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       101 ~~~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .+...-.+||.|||+|.-|-+.|..+.+.|++|++++.++..
T Consensus        13 ~~~~~~~kkIlIlG~Gqlgr~la~AAk~lG~~viv~d~~~~~   54 (433)
T 2dwc_A           13 TATTDSAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYANA   54 (433)
T ss_dssp             CTTSTTCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred             CCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             898999989999997899999999999869989999798998


No 246
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.71  E-value=0.012  Score=33.30  Aligned_cols=40  Identities=30%  Similarity=0.228  Sum_probs=35.0

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             7767766898798799999999996599089983588832
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      +..+.+|+|+|.|.-|-..|-.|.+.|.+|+++|+.+..-
T Consensus         3 e~~~~hviI~G~g~~g~~l~~~L~~~g~~vviid~d~~~~   42 (141)
T 3llv_A            3 ENGRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKI   42 (141)
T ss_dssp             ---CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHHH
T ss_conf             8887969998998899999999998799389974338899


No 247
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3f3s_A*
Probab=95.68  E-value=0.01  Score=33.84  Aligned_cols=36  Identities=17%  Similarity=0.268  Sum_probs=31.8

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668987987999999999965990899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ...+|.|||+|.-|---|..++.+|++|+++|+.+.
T Consensus         5 ~~~kVaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~   40 (319)
T 2dpo_A            5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR   40 (319)
T ss_dssp             --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
T ss_conf             998189988669999999999958991899979889


No 248
>3eyw_A C-terminal domain of glutathione-regulated potassium-efflux system protein KEFC fused...; KTN, RCK, K+ channel, K+ transport, K+ efflux; HET: FMN NAD; 2.40A {Escherichia coli K12}
Probab=95.58  E-value=0.014  Score=32.97  Aligned_cols=36  Identities=25%  Similarity=0.516  Sum_probs=32.5

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ..+|||+|.|.-|-..|-.|...|.+++++|.++..
T Consensus         4 ~mhVII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~   39 (413)
T 3eyw_A            4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDH   39 (413)
T ss_dssp             -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf             898999898889999999999689988999899999


No 249
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.58  E-value=0.014  Score=32.87  Aligned_cols=99  Identities=19%  Similarity=0.130  Sum_probs=67.9

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             767766898798799999999996599-0899835888321101000124354236023455413556521240455322
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV  183 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~  183 (549)
                      ...++|+|||+|..|+-+|..+.+.|. +|+|++|.+...-                                       
T Consensus       330 ~~gk~VvVIGgG~tA~D~A~~a~rlGa~~Vtlv~rr~~~~m---------------------------------------  370 (1025)
T 1gte_A          330 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNI---------------------------------------  370 (1025)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGC---------------------------------------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCHHCC---------------------------------------
T ss_conf             47998999898899999999999859988999972772217---------------------------------------


Q ss_pred             HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC---
Q ss_conf             00021178999999966895100136764100012799999999999966988998134332040587589999867---
Q T0604           184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN---  260 (549)
Q Consensus       184 ~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~---  260 (549)
                        +. .                              ..    ..+.+.+.|+++++.+....+..+++++.++.+..   
T Consensus       371 --~a-~------------------------------~~----ev~~a~~eGV~~~~~~~~~~i~~~~gkV~~~~~~~~e~  413 (1025)
T 1gte_A          371 --RA-V------------------------------PE----EVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQ  413 (1025)
T ss_dssp             --CS-C------------------------------HH----HHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             --CC-C------------------------------HH----HHHHHHHCCCEEEECCCEEEEEECCCEEEEEEEEEEEE
T ss_conf             --85-9------------------------------99----99999976978994671489990498799999998554


Q ss_pred             ------------CCEEEECEEEEECCCCHHH
Q ss_conf             ------------8489705689931887679
Q T0604           261 ------------GEEIKSRHVVLAVGHSARD  279 (549)
Q Consensus       261 ------------g~~i~ad~VVlAtGhsard  279 (549)
                                  ..++++|.||+|+|....+
T Consensus       414 d~~Gr~~~~~g~~~~i~aD~VI~AiG~~p~~  444 (1025)
T 1gte_A          414 DETGKWNEDEDQIVHLKADVVISAFGSVLRD  444 (1025)
T ss_dssp             CTTSCEEEEEEEEEEEECSEEEECSCEECCC
T ss_pred             CCCCCEEECCCCEEEEECCEEEEEECCCCCC
T ss_conf             4666278459967999999999921567699


No 250
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, MFE-1, fatty acid beta oxidation, oxidoreductase; 1.90A {Rattus norvegicus}
Probab=95.56  E-value=0.042  Score=29.93  Aligned_cols=37  Identities=22%  Similarity=0.319  Sum_probs=32.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6776689879879999999999659908998358883
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .-++|.|||||.=|---|..++.+|++|+|+|..+..
T Consensus        36 ~i~~VaViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~   72 (463)
T 1zcj_A           36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQ   72 (463)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf             8798989797899999999998289957999699899


No 251
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=95.56  E-value=0.0068  Score=34.89  Aligned_cols=39  Identities=26%  Similarity=0.297  Sum_probs=30.8

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2689854201235335789999999999999999999975
Q T0604           506 VNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIVAA  545 (549)
Q Consensus       506 ~~i~GLY~~GEgaGyagGI~saa~~G~~~a~~i~~~~~~~  545 (549)
                      +.++|||+||+... -+||-.|...|++||+.|+..|.+.
T Consensus       458 ~~~~~l~~aG~~~~-g~gi~ga~~sG~~aA~~il~~L~~~  496 (504)
T 1sez_A          458 KNLPGLFYAGNHRG-GLSVGKALSSGCNAADLVISYLESV  496 (504)
T ss_dssp             HHSTTEEECCSSSS-CSSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEECCCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             88999999848999-9888999999999999999997353


No 252
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.52  E-value=0.01  Score=33.78  Aligned_cols=43  Identities=33%  Similarity=0.461  Sum_probs=39.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             7766898798799999999996599089983588832110100
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT  149 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~  149 (549)
                      ...|||||||+|||+||+.|+++|++|+|||+.+.+|+|....
T Consensus        39 ~yDV~IIGaG~aGL~aA~~L~~~G~~V~VlEa~~~vGGr~~t~   81 (495)
T 2vvm_A           39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSS   81 (495)
T ss_dssp             CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEE
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf             5748998958999999999986899889992599871776787


No 253
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.51  E-value=0.019  Score=32.12  Aligned_cols=31  Identities=19%  Similarity=-0.013  Sum_probs=28.5

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             7766898798799999999996599089983
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVE  137 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlE  137 (549)
                      ..+|+|||++++++.+|-.|++.|++|.+..
T Consensus         7 GmkIaViGgd~r~~~~a~~L~~~G~~V~i~g   37 (300)
T 2rir_A            7 GLKIAVIGGDARQLEIIRKLTEQQADIYLVG   37 (300)
T ss_dssp             SCEEEEESBCHHHHHHHHHHHHTTCEEEEES
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             9989998788889999999997899599996


No 254
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.49  E-value=0.015  Score=32.74  Aligned_cols=38  Identities=13%  Similarity=0.254  Sum_probs=33.7

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCC
Q ss_conf             776776689879879999999999659-90899835888
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMG-FNPIIVERGKE  141 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G-~~V~VlErg~~  141 (549)
                      ..|..+|+|+|+|--|-..|..|++.| ++|++++|...
T Consensus         2 ~~m~~kI~ViGaG~vG~~ia~~L~~~~~~~v~~~dr~~~   40 (118)
T 3ic5_A            2 NAMRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA   40 (118)
T ss_dssp             CTTCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHH
T ss_conf             976549899866999999999998589987787506688


No 255
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.49  E-value=0.02  Score=31.94  Aligned_cols=39  Identities=23%  Similarity=0.358  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88743026898542012353357899999999999999999
Q T0604           500 GKDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVAR  540 (549)
Q Consensus       500 ~~tleS~~i~GLY~~GEgaGyagGI~saa~~G~~~a~~i~~  540 (549)
                      +++++ .+++|+|.+|+..+ .+-|+.|--+|-++|+.|-+
T Consensus       659 ~~~~~-Ts~p~VyaiGDa~~-p~~i~~Ai~~G~~aA~~I~~  697 (729)
T 1o94_A          659 SEWAE-NDIKGIYLIGDAEA-PRLIADATFTGHRVAREIEE  697 (729)
T ss_dssp             GGTGG-GTCCEEEECGGGTS-CCCHHHHHHHHHHHHHTTTS
T ss_pred             CCCCC-CCCCCEEEEECCCC-CCHHHHHHHHHHHHHHHHCC
T ss_conf             11135-78999899818162-10799999999999998570


No 256
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structure initiative; 2.30A {Desulfovibrio vulgaris DP4}
Probab=95.44  E-value=0.024  Score=31.48  Aligned_cols=113  Identities=19%  Similarity=0.358  Sum_probs=82.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHH-HCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             6776689879879999999999-659908998358883211010001243542360234554135565212404553220
Q T0604           106 LTERPIVIGFGPCGLFAGLVLA-QMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La-~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      ..++++|||+|+.|+..|..|+ ..|.+|+++++++.+..+                            +.+        
T Consensus       158 ~~~~vvViGgG~~g~e~A~~l~~~~~~~Vtl~~~~~~~l~~----------------------------~~~--------  201 (472)
T 3iwa_A          158 EVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG----------------------------FTS--------  201 (472)
T ss_dssp             SCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT----------------------------TSC--------
T ss_pred             CCCEEEEECCCHHHCEEEEECCCCCCCEEEEEECCCCCCCC----------------------------CCC--------
T ss_conf             79879999567110312100123466079862011100554----------------------------442--------


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEE
Q ss_conf             00211789999999668951001367641000127999999999999669889981343320405875899998678489
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEI  264 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i  264 (549)
                                                         ..+...+.+.+++.|+++++++++..+..+++... +++.+++++
T Consensus       202 -----------------------------------~~~~~~~~~~l~~~gi~~~~~~~v~~i~~~~~~~~-v~~~~~~~i  245 (472)
T 3iwa_A          202 -----------------------------------KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVA-RVITDKRTL  245 (472)
T ss_dssp             -----------------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEE-EEEESSCEE
T ss_pred             -----------------------------------HHHHHHHHCCCCCEEEEEEECCEEEEEEECCCEEE-EEECCCCEE
T ss_conf             -----------------------------------55655431122111599992645899980498069-997467357


Q ss_pred             EECEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             7056899318876799999996697111
Q T0604           265 KSRHVVLAVGHSARDTFEMLHERGVYME  292 (549)
Q Consensus       265 ~ad~VVlAtGhsard~~~~l~~~Gi~~~  292 (549)
                      ++|.|++|+|.....  ++|.+.|+.+.
T Consensus       246 ~~D~vl~a~G~~pn~--~~l~~~gi~~~  271 (472)
T 3iwa_A          246 DADLVILAAGVSPNT--QLARDAGLELD  271 (472)
T ss_dssp             ECSEEEECSCEEECC--HHHHHHTCCBC
T ss_pred             ECCEEEEEECCCCCC--HHHHHCCCCCC
T ss_conf             079899975755585--67986695198


No 257
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with cofactor and product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.44  E-value=0.0098  Score=33.88  Aligned_cols=33  Identities=24%  Similarity=0.319  Sum_probs=30.4

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             668987987999999999965990899835888
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      +|.|||.|.-||..|..||..|++|+.+|.++.
T Consensus         2 kI~ViGlGyVGl~~a~~la~~G~~V~g~D~d~~   34 (436)
T 1mv8_A            2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST   34 (436)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
T ss_conf             799989677899999999948998899989999


No 258
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=95.41  E-value=0.031  Score=30.77  Aligned_cols=38  Identities=18%  Similarity=0.188  Sum_probs=33.1

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             76776689879879999999999659908998358883
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ..-++|.|||||.-|---|..++.+|++|+++|..+..
T Consensus       310 ~~i~kv~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~  347 (725)
T 2wtb_A          310 RKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKF  347 (725)
T ss_dssp             CCCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHH
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCHHH
T ss_conf             45657999886756899999998669984685534588


No 259
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae}
Probab=95.40  E-value=0.0076  Score=34.57  Aligned_cols=45  Identities=16%  Similarity=0.179  Sum_probs=35.4

Q ss_pred             CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88743026898542012353357899999999999999999999752
Q T0604           500 GKDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIVAAM  546 (549)
Q Consensus       500 ~~tleS~~i~GLY~~GEgaGyagGI~saa~~G~~~a~~i~~~~~~~~  546 (549)
                      ++.+.+ ..+++|+||+.++ -+||.+|..+|+++|++|++.|.++.
T Consensus       287 ~~~~~~-~~~~v~l~GDa~~-g~gi~~A~~sg~~aA~~i~~~L~~e~  331 (336)
T 1yvv_A          287 WGALSD-ADLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLEHLQLEH  331 (336)
T ss_dssp             CSCEEE-TTTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred             CCCEEE-CCCCEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             542265-7899999821246-86899999999999999999815867


No 260
>2jfg_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; nucleotide-binding, peptidoglycan synthesis, MURD ligase, ATP-binding, cell division, UMA, ADP; HET: KCX UMA ADP; 1.52A {Escherichia coli} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.36  E-value=0.023  Score=31.58  Aligned_cols=36  Identities=19%  Similarity=0.339  Sum_probs=31.9

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .++|.|||.|-+|+.+|-.|.+.|++|.+.|.....
T Consensus         6 gk~i~iiGiG~sG~s~a~~l~~~G~~v~~~D~~~~~   41 (445)
T 2jfg_A            6 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP   41 (445)
T ss_dssp             TCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSC
T ss_pred             CCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             998999998899999999999787949999798992


No 261
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.29  E-value=0.024  Score=31.41  Aligned_cols=31  Identities=16%  Similarity=0.055  Sum_probs=28.7

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             7766898798799999999996599089983
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVE  137 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlE  137 (549)
                      .++|+|||+++.++.+|-.|++.|++|.+..
T Consensus         5 G~~iaViggd~r~~~~a~~L~~~G~~V~v~~   35 (293)
T 3d4o_A            5 GKHVVIIGGDARQLEIIRKLSTFDAKISLVG   35 (293)
T ss_dssp             TCEEEEECBCHHHHHHHHHHHHTTCEEEEES
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             7489997986639999999997899899996


No 262
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, disulfide oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.26  E-value=0.018  Score=32.27  Aligned_cols=42  Identities=17%  Similarity=0.188  Sum_probs=30.5

Q ss_pred             CCCCCCCCCCCEEECCCCCHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             874302689854201235335-7899999999999999999999
Q T0604           501 KDFQSVNLKGFYPAGEGAGYA-GGILSAGIDGIKVAEAVARDIV  543 (549)
Q Consensus       501 ~tleS~~i~GLY~~GEgaGya-gGI~saa~~G~~~a~~i~~~~~  543 (549)
                      .+||+ ++||+|.||+.++.. .=+..|+-+|..||..+.++|.
T Consensus       281 ~~~~T-sv~~VyA~GDv~~~~~~~~~~A~~~G~~Aa~~~~~~l~  323 (333)
T 1vdc_A          281 GTTQT-SVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQ  323 (333)
T ss_dssp             TSCBC-SSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC-CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98423-99999999975278741999999999999999999999


No 263
>1aog_A Trypanothione reductase; FAD dependent disulphide oxidoreductase; HET: FAD; 2.30A {Trypanosoma cruzi} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1gxf_A* 1bzl_A* 1nda_A* 2wba_A*
Probab=95.15  E-value=0.034  Score=30.53  Aligned_cols=36  Identities=22%  Similarity=0.135  Sum_probs=30.8

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCC
Q ss_conf             7766898798799999999996599-08998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~v  142 (549)
                      .-.|||||+||||+.||+.|++.|. +|+|+|+....
T Consensus         3 ~yDvvIIG~G~aG~~aA~~a~~~g~k~V~vie~~~~~   39 (485)
T 1aog_A            3 IFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVH   39 (485)
T ss_dssp             SBSEEEECCSHHHHHHHHHHHHTSCCCEEEEESCSSS
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf             5268998988899999999997599869999861356


No 264
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.13  E-value=0.025  Score=31.36  Aligned_cols=33  Identities=21%  Similarity=0.508  Sum_probs=28.7

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCE-EEEEEC
Q ss_conf             677668987987999999999965990-899835
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFN-PIIVER  138 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~-V~VlEr  138 (549)
                      ...||+|||+|.-|..+|..|++.|+. .+|++.
T Consensus       117 ~~~~VliiG~GglGs~va~~La~~Gvg~i~liD~  150 (353)
T 3h5n_A          117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDN  150 (353)
T ss_dssp             HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred             HCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             5598999887889999999999808986999959


No 265
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.11  E-value=0.018  Score=32.17  Aligned_cols=41  Identities=24%  Similarity=0.414  Sum_probs=31.9

Q ss_pred             CCCCCCEEECCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             268985420123--53357899999999999999999999752
Q T0604           506 VNLKGFYPAGEG--AGYAGGILSAGIDGIKVAEAVARDIVAAM  546 (549)
Q Consensus       506 ~~i~GLY~~GEg--aGyagGI~saa~~G~~~a~~i~~~~~~~~  546 (549)
                      ..+++||||||.  ..|.|-|-.|...|++||+.|+++++...
T Consensus       791 ~~~g~LfFAGE~Ts~~~pgtveGA~~SG~RAA~~Il~~~~G~~  833 (852)
T 2xag_A          791 QPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAM  833 (852)
T ss_dssp             CCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCG
T ss_pred             CCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             8888199987346799989389999999999999999852898


No 266
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.10  E-value=0.023  Score=31.53  Aligned_cols=36  Identities=19%  Similarity=0.260  Sum_probs=31.8

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668987987999999999965990899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ..++|+|+|.|-+|+.+|-.|++.|..|...+....
T Consensus         8 ~~k~i~iiG~G~sG~s~a~~l~~~G~~v~~~D~~~~   43 (451)
T 3lk7_A            8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF   43 (451)
T ss_dssp             TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             899899998899999999999978997999979878


No 267
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.08  E-value=0.036  Score=30.36  Aligned_cols=36  Identities=25%  Similarity=0.194  Sum_probs=32.5

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668987987999999999965990899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+.+|||+|.|.-|...|-.|.+.|.+++++|..+.
T Consensus         2 ~k~hviI~G~g~~g~~la~~L~~~g~~vvvid~d~~   37 (153)
T 1id1_A            2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPE   37 (153)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCH
T ss_conf             988799989998999999999976998799988837


No 268
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.08  E-value=0.056  Score=29.13  Aligned_cols=63  Identities=11%  Similarity=0.049  Sum_probs=41.9

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             767766898798799999999996599089983588832110100012435423602345541
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFG  167 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g  167 (549)
                      ...+||-|+|+|=-|.+.+..+.+.|++|++++..+.+..+......+......|.+....+.
T Consensus        22 ~~~krigIlG~GQLgrml~~aA~~LGi~v~vld~~~~pa~~v~~~d~~i~~~~~D~~al~~~a   84 (403)
T 3k5i_A           22 WNSRKVGVLGGGQLGRMLVESANRLNIQVNVLDADNSPAKQISAHDGHVTGSFKEREAVRQLA   84 (403)
T ss_dssp             CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESTTCTTGGGCCSSCCEESCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCEEEECCCCCHHHHHHHH
T ss_conf             789889998798999999999997899899994899986660006448976889999999998


No 269
>2x58_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, lyase, isomerase, peroxisome; HET: ADP COA; 2.80A {Rattus norvegicus}
Probab=95.06  E-value=0.038  Score=30.22  Aligned_cols=38  Identities=21%  Similarity=0.316  Sum_probs=33.4

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             76776689879879999999999659908998358883
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ..-++|.|||+|.=|---|+.++.+|++|+++|..+..
T Consensus       299 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~  336 (727)
T 2x58_A          299 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQ  336 (727)
T ss_dssp             CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHCCCCCEECHHHHHH
T ss_conf             55457999941788999999997559962223246888


No 270
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens AM1} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.97  E-value=0.034  Score=30.50  Aligned_cols=34  Identities=24%  Similarity=0.430  Sum_probs=30.4

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             6776689879-879999999999659908998358
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      ..++|+|.|| |+.|..+|..|++.|.+|+++.|.
T Consensus       118 ~gK~vlVtGatggiG~a~A~~la~~Ga~V~l~~R~  152 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK  152 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             99989999488899999999999779989998388


No 271
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=94.87  E-value=0.0085  Score=34.27  Aligned_cols=52  Identities=27%  Similarity=0.377  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECC--CCEEEECEEEEECC
Q ss_conf             99999999999966988998134332040587589999867--84897056899318
Q T0604           220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSN--GEEIKSRHVVLAVG  274 (549)
Q Consensus       220 ~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~--g~~i~ad~VVlAtG  274 (549)
                      ..+++.|.   +..+++++.++.|+.|..+++.+..+.+.+  ++.+.+|.||+|+.
T Consensus       238 ~~~~~~l~---~~~~~~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~vv~a~p  291 (478)
T 2ivd_A          238 QVLIDALA---ASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAP  291 (478)
T ss_dssp             HHHHHHHH---HHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSC
T ss_pred             HHHHHHHH---HHHCCEEEECCEEEEEEEECCCCEEEEECCCCCEEEECCCEEECCC
T ss_conf             77799998---6403268705258999995894169995355420121242154488


No 272
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=94.82  E-value=0.077  Score=28.27  Aligned_cols=36  Identities=22%  Similarity=0.388  Sum_probs=31.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ..||.|||+|.-|.+.|..+.+.|++|++++.++..
T Consensus        11 ~~kvlIiG~Gql~r~~a~Aa~~lG~~v~~v~~~~~~   46 (391)
T 1kjq_A           11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADA   46 (391)
T ss_dssp             CCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             989999897899999999999879989999799998


No 273
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.76  E-value=0.037  Score=30.26  Aligned_cols=40  Identities=13%  Similarity=0.115  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             8776776689879879999999999659908998358883
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .+.+.++|.|||.|.-|-.-|+.|.+.|++|.++++.+..
T Consensus         4 ~~~~~r~V~IIGlGliG~SlA~aL~~~g~~V~g~D~~~~~   43 (341)
T 3ktd_A            4 TKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSG   43 (341)
T ss_dssp             --CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             7889980899975989999999998787989999899999


No 274
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural genomics, PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.70  E-value=0.026  Score=31.22  Aligned_cols=34  Identities=15%  Similarity=0.380  Sum_probs=31.4

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6689879879999999999659908998358883
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ||+|+|+|--|...|-.|.+.|++|+++|+.+..
T Consensus         2 ~viI~G~g~~G~~la~~L~~~~~~vvvId~d~~~   35 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDREL   35 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf             8999998899999999999689979999899999


No 275
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.67  E-value=0.037  Score=30.27  Aligned_cols=36  Identities=19%  Similarity=0.278  Sum_probs=32.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCC
Q ss_conf             776689879879999999999659--908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~v  142 (549)
                      .+||.|||.|--||..|..||+.|  ++|+.++...+.
T Consensus        18 ~~kI~ViGlGyVGl~~A~~lA~~g~~~~V~g~Did~~~   55 (478)
T 3g79_A           18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKS   55 (478)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf             77699987777789999999838999859999889743


No 276
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.65  E-value=0.033  Score=30.61  Aligned_cols=36  Identities=22%  Similarity=0.172  Sum_probs=32.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .++|+|+|+|..|-.+|..|++.|++|+|..|...-
T Consensus         3 ~k~V~viGaG~~G~~~a~~L~~~g~~v~va~r~~~~   38 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLES   38 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             877999888899999999998294979999798999


No 277
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99.5) (CM) and prephenate dehydrogenase...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.60  E-value=0.061  Score=28.89  Aligned_cols=38  Identities=18%  Similarity=0.344  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             77677668987-987999999999965990899835888
Q T0604           104 ENLTERPIVIG-FGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       104 ~~~~~rVVVVG-aGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+.-++|+||| .|-=|-+.|..|.+.|+.|.+++|.+.
T Consensus        18 ~~~~~kI~IIGG~G~mG~sla~~l~~~G~~V~~~d~~~~   56 (298)
T 2pv7_A           18 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCH
T ss_conf             888882899938885689999999968994899738813


No 278
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.59  E-value=0.051  Score=29.37  Aligned_cols=39  Identities=13%  Similarity=0.244  Sum_probs=31.4

Q ss_pred             CCCCC-CCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCC
Q ss_conf             87767-766898798799999999996599-0899835888
Q T0604           103 PENLT-ERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKE  141 (549)
Q Consensus       103 ~~~~~-~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~  141 (549)
                      |.+|. +||.|||+|--|-.+|+.|+..++ +..|++..+.
T Consensus         2 ~~~m~~~KV~IiGaG~VG~~~a~~l~~~~l~el~L~Di~~~   42 (324)
T 3gvi_A            2 PGSMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG   42 (324)
T ss_dssp             ----CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             98788986999898989999999996399988999858998


No 279
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=94.53  E-value=0.041  Score=30.02  Aligned_cols=39  Identities=15%  Similarity=0.071  Sum_probs=32.7

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             767766898798799999999996599089983588832
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      ..-+||.|||||.-|---|..++.+|++|+++|..+...
T Consensus       312 ~~i~kv~ViGaG~mG~~IA~~~a~~G~~V~l~D~~~~~l  350 (715)
T 1wdk_A          312 KDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI  350 (715)
T ss_dssp             CCCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CCCCEEEEECCCCCCCCCEEEEEECCCCCEEEECCHHHH
T ss_conf             544234431477545530256640586203651588875


No 280
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.52  E-value=0.024  Score=31.40  Aligned_cols=32  Identities=28%  Similarity=0.331  Sum_probs=29.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             67766898798799999999996599089983
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVE  137 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlE  137 (549)
                      ..++|+|||+|..+..=+..|.+.|.+|+|+-
T Consensus        12 ~~k~vLVVGgG~VA~rr~~~LL~agA~VtVVs   43 (274)
T 1kyq_A           12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVS   43 (274)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             89869998998999999999997899699990


No 281
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transferase, structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.49  E-value=0.04  Score=30.06  Aligned_cols=33  Identities=18%  Similarity=0.363  Sum_probs=28.7

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECC
Q ss_conf             7766898798799999999996599-08998358
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERG  139 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg  139 (549)
                      ..+|+|||+|--|..+|..|++.|+ +.+|++.+
T Consensus        36 ~~~VlivG~GglGs~~a~~La~~GVg~i~lvD~D   69 (292)
T 3h8v_A           36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD   69 (292)
T ss_dssp             GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             5988998868899999999998289708998494


No 282
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=94.49  E-value=0.052  Score=29.33  Aligned_cols=36  Identities=19%  Similarity=0.205  Sum_probs=31.6

Q ss_pred             CCCCEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             67766898798-7999999999965990899835888
Q T0604           106 LTERPIVIGFG-PCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaG-pAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |+|.|+|.||+ --|...|..|++.|++|++..|...
T Consensus         1 mnk~vlItGas~GiG~aia~~l~~~G~~V~l~~r~~~   37 (247)
T 3dii_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEK   37 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             9988999668988999999999987998999979888


No 283
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.49  E-value=0.023  Score=31.54  Aligned_cols=113  Identities=18%  Similarity=0.219  Sum_probs=78.8

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHC----CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf             677668987987999999999965----9908998358883211010001243542360234554135565212404553
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQM----GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYS  181 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~----G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t  181 (549)
                      ..++|+|||+|+.|+.+|..|++.    |..|+++++......+.                           +       
T Consensus       179 ~~~~vvViGgG~~g~e~A~~l~~~~~~~~~~v~~~~~~~~~l~~~---------------------------l-------  224 (493)
T 1m6i_A          179 EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI---------------------------L-------  224 (493)
T ss_dssp             HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT---------------------------S-------
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH---------------------------H-------
T ss_conf             297699988884113567765565304674389931333332012---------------------------3-------


Q ss_pred             HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCC
Q ss_conf             22000211789999999668951001367641000127999999999999669889981343320405875899998678
Q T0604           182 QVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG  261 (549)
Q Consensus       182 ~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g  261 (549)
                                                           ...+...+.+.+++.|++++.++.+..+..++..+ .+.+.+|
T Consensus       225 -------------------------------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~-~v~~~dg  266 (493)
T 1m6i_A          225 -------------------------------------PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKL-LIKLKDG  266 (493)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEE-EEEETTS
T ss_pred             -------------------------------------HHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCEE-EEEECCC
T ss_conf             -------------------------------------26776666656651596230470589998259879-9995289


Q ss_pred             CEEEECEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             4897056899318876799999996697111
Q T0604           262 EEIKSRHVVLAVGHSARDTFEMLHERGVYME  292 (549)
Q Consensus       262 ~~i~ad~VVlAtGhsard~~~~l~~~Gi~~~  292 (549)
                      ++++||.||+|+|.....  +++...|+.+.
T Consensus       267 ~~~~aD~Vi~a~G~~Pn~--~l~~~~gl~~~  295 (493)
T 1m6i_A          267 RKVETDHIVAAVGLEPNV--ELAKTGGLEID  295 (493)
T ss_dssp             CEEEESEEEECCCEEECC--TTHHHHTCCBC
T ss_pred             CEEEECEEEEEECCCCCC--HHHHHCCCCEE
T ss_conf             788638899974644473--66875696272


No 284
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.47  E-value=0.054  Score=29.24  Aligned_cols=35  Identities=23%  Similarity=0.142  Sum_probs=22.2

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECC
Q ss_conf             767766898798799999999996599-08998358
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERG  139 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg  139 (549)
                      ....+|+|.|+|+-|++|+..+...|. +|+++++.
T Consensus       189 ~~g~~vlI~GaG~vG~~aiqlak~~G~~~Vi~~~~~  224 (373)
T 2fzw_A          189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDIN  224 (373)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             998999998968999999999998399879999699


No 285
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.47  E-value=0.021  Score=31.85  Aligned_cols=45  Identities=22%  Similarity=0.277  Sum_probs=35.7

Q ss_pred             CCCCCCCCCCCCEEECCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8874302689854201235-335789999999999999999999975
Q T0604           500 GKDFQSVNLKGFYPAGEGA-GYAGGILSAGIDGIKVAEAVARDIVAA  545 (549)
Q Consensus       500 ~~tleS~~i~GLY~~GEga-GyagGI~saa~~G~~~a~~i~~~~~~~  545 (549)
                      |+.|+ .++||+|.||..+ |-.+-|..|..+|..+|+.|...+.+.
T Consensus       352 d~~~~-T~~pgVyA~GDv~~Gp~~~i~~A~~~g~~aa~~i~~~l~~~  397 (460)
T 1cjc_A          352 MEGRV-VDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKAG  397 (460)
T ss_dssp             ETTEE-TTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEE-ECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             78607-64599899984225842899999999999999999764417


No 286
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.47  E-value=0.039  Score=30.09  Aligned_cols=26  Identities=15%  Similarity=0.215  Sum_probs=16.5

Q ss_pred             ECEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             05689931887679999999669711
Q T0604           266 SRHVVLAVGHSARDTFEMLHERGVYM  291 (549)
Q Consensus       266 ad~VVlAtGhsard~~~~l~~~Gi~~  291 (549)
                      .+.+|+..|.-++...++|...|...
T Consensus       156 ~~v~v~G~G~~g~~~~~~~~~~g~~v  181 (293)
T 3d4o_A          156 ANVAVLGLGRVGMSVARKFAALGAKV  181 (293)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEE
T ss_conf             99999892699999999998579989


No 287
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.46  E-value=0.073  Score=28.42  Aligned_cols=54  Identities=19%  Similarity=0.212  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHCCCEEEEECCCCCCEE--CCCEEEEEEECCCCEEEECEEEEECC
Q ss_conf             9999999999966988998134332040--58758999986784897056899318
Q T0604           221 TMIEKMRATIIELGGEIRFSTRVDDLHM--EDGQITGVTLSNGEEIKSRHVVLAVG  274 (549)
Q Consensus       221 ~vv~~L~~~l~~~G~~i~~~t~V~~i~~--~~g~v~gV~t~~g~~i~ad~VVlAtG  274 (549)
                      .+.+.+-+.+.-.|+.+..++.|..|..  +++++.+|...+|+++.|+.||....
T Consensus       379 EIpQ~FcR~~AV~Gg~Y~L~~~I~~i~~d~e~~~~~~v~~~~g~~i~~k~vI~~~s  434 (650)
T 1vg0_A          379 ELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS  434 (650)
T ss_dssp             HHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred             HHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCEEEEECCCCCEEECCEEEECCC
T ss_conf             78899999987539689858854256760688717889826992997047998943


No 288
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.46  E-value=0.041  Score=30.01  Aligned_cols=34  Identities=24%  Similarity=0.390  Sum_probs=28.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             67766898798799999999996599089983588
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      |+-||.|+|+|.-|.+.|..|++. .+|+++.|..
T Consensus         1 m~MkI~I~GaGaiG~~~a~~L~~~-~~V~~~~r~~   34 (307)
T 3ego_A            1 MSLKIGIIGGGSVGLLCAYYLSLY-HDVTVVTRRQ   34 (307)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHTT-SEEEEECSCH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHCC-CCEEEEECCH
T ss_conf             998899999559999999999774-9869998888


No 289
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrate binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A*
Probab=94.45  E-value=0.023  Score=31.53  Aligned_cols=52  Identities=13%  Similarity=0.231  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEE---CCCCEEEECEEEEECC
Q ss_conf             999999999999669889981343320405875899998---6784897056899318
Q T0604           220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL---SNGEEIKSRHVVLAVG  274 (549)
Q Consensus       220 ~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t---~~g~~i~ad~VVlAtG  274 (549)
                      ..+.+.|.   +.++.+|+++++|+.|..+++++..+..   .+++++.||+||+|+.
T Consensus       241 ~~l~~~La---~~l~~~I~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~a~p  295 (498)
T 2iid_A          241 DKLPTAMY---RDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTT  295 (498)
T ss_dssp             THHHHHHH---HHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSC
T ss_pred             HHHHHHHH---HHCCCEEEECCCEEEEEEECCEEEEEEECCCCCCCCCCCCCEEEECC
T ss_conf             99999999---85798499667179999949959999971664444222452487348


No 290
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.44  E-value=0.064  Score=28.79  Aligned_cols=40  Identities=28%  Similarity=0.328  Sum_probs=35.1

Q ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             8877677668987987999999999965990899835888
Q T0604           102 APENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       102 ~~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ..+.+.-+|-|||.|.-|..-|..|++.|++|.+++|.+.
T Consensus         4 ~~~~~~mkIgvIG~G~mG~~ia~~L~~~G~~V~v~~r~~~   43 (306)
T 3l6d_A            4 SDESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG   43 (306)
T ss_dssp             CCCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             7788999689981599999999999978996999809999


No 291
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.44  E-value=0.06  Score=28.96  Aligned_cols=14  Identities=14%  Similarity=0.363  Sum_probs=5.3

Q ss_pred             HHHHHHHCC-CCCCC
Q ss_conf             999988612-22055
Q T0604           463 IREAIPAFD-RKIKG  476 (549)
Q Consensus       463 l~~~l~~f~-~~~~G  476 (549)
                      +.+++..+. .++.|
T Consensus       333 i~~A~~~l~~gk~~G  347 (360)
T 1piw_A          333 VHEAFERMEKGDVRY  347 (360)
T ss_dssp             HHHHHHHHHHTCCSS
T ss_pred             HHHHHHHHHCCCCCE
T ss_conf             999999998699833


No 292
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 5adh_A* ...
Probab=94.42  E-value=0.062  Score=28.85  Aligned_cols=33  Identities=24%  Similarity=0.171  Sum_probs=17.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEEC
Q ss_conf             67766898798799999999996599-0899835
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVER  138 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlEr  138 (549)
                      +.++|+|.|+|..|++++..|+..|. +|+.+++
T Consensus       191 ~g~~VlV~GaG~~g~~~~~~a~~~g~~~Vi~~~~  224 (374)
T 2jhf_A          191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI  224 (374)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             9998999898768999999999809997999968


No 293
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.37  E-value=0.064  Score=28.79  Aligned_cols=39  Identities=21%  Similarity=0.273  Sum_probs=32.1

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCC
Q ss_conf             7767766898798799999999996599-08998358883
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEV  142 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~v  142 (549)
                      .-|.+||.|||+|--|-.+|+.|+..++ +..|++..+..
T Consensus        11 ~~mr~KV~IiGaG~VG~~~A~~l~~~~~~el~L~Di~~~~   50 (328)
T 2hjr_A           11 VIMRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGV   50 (328)
T ss_dssp             --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTH
T ss_pred             EEECCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCH
T ss_conf             6304709999969899999999967999879998489971


No 294
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.36  E-value=0.062  Score=28.86  Aligned_cols=36  Identities=17%  Similarity=0.242  Sum_probs=30.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCC
Q ss_conf             67766898798799999999996599-0899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~  141 (549)
                      |.+||.|||+|.-|-.+|+.|+..+. ++.|++....
T Consensus         1 M~~KV~IiGaG~VG~~~a~~l~~~~l~el~LiD~~~~   37 (309)
T 1ur5_A            1 MRKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEG   37 (309)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             9973999997989999999998389987999869998


No 295
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=94.30  E-value=0.041  Score=30.00  Aligned_cols=53  Identities=13%  Similarity=0.253  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECC
Q ss_conf             9999999999996698899813433204058758999986784897056899318
Q T0604           220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVG  274 (549)
Q Consensus       220 ~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtG  274 (549)
                      ..+++.+.+.+.  +..+++++.+..+....+.+..+.+.+|..+.++.++.+.-
T Consensus       202 ~~l~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  254 (516)
T 1rsg_A          202 DSVVQRIAQSFP--QNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVP  254 (516)
T ss_dssp             HHHHHHHHTTSC--GGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCC
T ss_pred             HHHHHHHHHHCC--CCCEEEEEECCEEECCCCCCCEEEECCCCEEECCEEEEEEC
T ss_conf             899999975365--55436532000000036643203413784122123899542


No 296
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.30  E-value=0.051  Score=29.39  Aligned_cols=36  Identities=17%  Similarity=0.223  Sum_probs=32.7

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ..||.|||.|--|-.-|..|+++|++|.+++|.+..
T Consensus        28 ~pKIgiIG~G~mG~~lA~~L~~aG~~V~v~dr~~~~   63 (215)
T 2vns_A           28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKR   63 (215)
T ss_dssp             -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf             995999894889999999999879979995798799


No 297
>3c85_A Putative glutathione-regulated potassium-efflux system protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.19  E-value=0.064  Score=28.76  Aligned_cols=39  Identities=21%  Similarity=0.243  Sum_probs=32.4

Q ss_pred             CCCEEEECCCHHHHHHHHHHH-HCCCEEEEEECCCCCCCC
Q ss_conf             776689879879999999999-659908998358883211
Q T0604           107 TERPIVIGFGPCGLFAGLVLA-QMGFNPIIVERGKEVRER  145 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La-~~G~~V~VlErg~~vg~r  145 (549)
                      ..+|||+|.|.-|-..|-.|. +.|..++++|..+..-.+
T Consensus        39 ~~~ViI~G~Gr~G~~la~~L~~~~~~~vvvID~d~~~~~~   78 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQ   78 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHH
T ss_conf             9978998987899999999999789859999387899998


No 298
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=94.18  E-value=0.043  Score=29.83  Aligned_cols=36  Identities=19%  Similarity=0.292  Sum_probs=32.1

Q ss_pred             CCCEEEECCCHHHHHH-HHHHHHCCCEEEEEECCCCC
Q ss_conf             7766898798799999-99999659908998358883
Q T0604           107 TERPIVIGFGPCGLFA-GLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~A-Al~La~~G~~V~VlErg~~v  142 (549)
                      .+||.+||-|-+||.+ |..|.++|++|.+.++.+..
T Consensus        18 ~k~i~~iGiggsG~salA~~l~~~G~~V~~~D~~~~~   54 (475)
T 1p3d_A           18 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGV   54 (475)
T ss_dssp             CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSH
T ss_pred             CCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCH
T ss_conf             7789999966999999999999788939999289997


No 299
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; NP_070841.1, 3-hydroxyacyl-COA dehydrogenase (HBD-9), structural genomics; HET: PE8; 2.00A {Archaeoglobus fulgidus dsm 4304}
Probab=94.14  E-value=0.043  Score=29.83  Aligned_cols=36  Identities=17%  Similarity=0.227  Sum_probs=29.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6776689879879999999999659908998358883
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .--||.|||||.-|.--|+.++ .|++|+++|..+..
T Consensus        11 ~~mkV~ViGaG~mG~~iA~~~a-~g~~V~l~d~~~~~   46 (293)
T 1zej_A           11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKA   46 (293)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHH-CCCCEEEEECCHHH
T ss_conf             8878999891799999999997-79934999898999


No 300
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreductase, porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.14  E-value=0.051  Score=29.41  Aligned_cols=30  Identities=20%  Similarity=0.090  Sum_probs=28.5

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf             776689879879999999999659908998
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIV  136 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~Vl  136 (549)
                      .++|+|||+|..+.-=+..|.+.|.+|+|+
T Consensus        31 ~k~vLVvGgG~vA~rK~~~Ll~~ga~V~Vi   60 (223)
T 3dfz_A           31 GRSVLVVGGGTIATRRIKGFLQEGAAITVV   60 (223)
T ss_dssp             TCCEEEECCSHHHHHHHHHHGGGCCCEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             885999899899999999996389989999


No 301
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=94.08  E-value=0.037  Score=30.26  Aligned_cols=36  Identities=19%  Similarity=0.237  Sum_probs=31.7

Q ss_pred             CCCEEEECCCHHHHHH-HHHHHHCCCEEEEEECCCCC
Q ss_conf             7766898798799999-99999659908998358883
Q T0604           107 TERPIVIGFGPCGLFA-GLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~A-Al~La~~G~~V~VlErg~~v  142 (549)
                      .+||.|||.|-+||.+ |..|.+.|++|.+-++....
T Consensus        19 ~k~i~~iGiggsG~s~lA~~l~~~G~~V~gsD~~~~~   55 (491)
T 2f00_A           19 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNP   55 (491)
T ss_dssp             CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCH
T ss_conf             7879999857999999999999689929999389997


No 302
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.07  E-value=0.05  Score=29.47  Aligned_cols=33  Identities=30%  Similarity=0.420  Sum_probs=29.9

Q ss_pred             CEEEE-CCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             66898-7987999999999965990899835888
Q T0604           109 RPIVI-GFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       109 rVVVV-GaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ||.|| |+|--|...|..|++.|++|+|.-|.+.
T Consensus         2 kIaiigGaG~~G~aLA~~la~~Gh~V~l~~R~~e   35 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREE   35 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred             EEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf             8999956679999999999978997999839999


No 303
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.90  E-value=0.076  Score=28.31  Aligned_cols=39  Identities=13%  Similarity=0.190  Sum_probs=34.3

Q ss_pred             CCCCCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             8776776689879-87999999999965990899835888
Q T0604           103 PENLTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       103 ~~~~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ...|+.||+|.|| |.-|-..+-.|.++|++|+++.|...
T Consensus         7 ~~~mk~KIlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~   46 (318)
T 2r6j_A            7 ENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS   46 (318)
T ss_dssp             --CCCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             5699983999899958999999999978697999978964


No 304
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structural genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.83  E-value=0.054  Score=29.22  Aligned_cols=33  Identities=18%  Similarity=0.104  Sum_probs=28.8

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             677668987987999999999965990899835
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVER  138 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlEr  138 (549)
                      ..++|+|||+|.+|+-.|..|++.+.++++.-+
T Consensus       211 ~gK~VlVVG~g~Sa~Dia~~l~~~a~~~~~~s~  243 (447)
T 2gv8_A          211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSL  243 (447)
T ss_dssp             TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEEC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEC
T ss_conf             667599989874599999999976886799974


No 305
>2v65_A LDH-A, L-lactate dehydrogenase A chain; oxidoreductase, NAD, FISH, cytoplasm, glycolysis, psychrophIle; 2.35A {Champsocephalus gunnari}
Probab=93.81  E-value=0.11  Score=27.40  Aligned_cols=39  Identities=15%  Similarity=0.324  Sum_probs=31.8

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCC
Q ss_conf             87767766898798799999999996599--0899835888
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKE  141 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~  141 (549)
                      |.....||.|||+|.-|-..|+.|+..++  +..|++..++
T Consensus        16 ~~~~~~KI~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~~~   56 (331)
T 2v65_A           16 PVGSRSKVTVVGVGMVGMASAISILLKDLCDELAMVDVMED   56 (331)
T ss_dssp             CCCCSSCEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             77799869998978889999999985799887999838998


No 306
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.81  E-value=0.18  Score=26.00  Aligned_cols=41  Identities=20%  Similarity=0.250  Sum_probs=30.1

Q ss_pred             CCCCCCCCCEEEE-C-CCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7887767766898-7-987999999999965990899835888
Q T0604           101 KAPENLTERPIVI-G-FGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       101 ~~~~~~~~rVVVV-G-aGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .++.+++-|++|| | ++--|...|..|++.|++|++..|...
T Consensus        19 ~~~~~l~GK~alITG~s~GIG~aia~~la~~Ga~V~i~~r~~~   61 (302)
T 1w6u_A           19 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD   61 (302)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             8998989998999377888999999999986998999979888


No 307
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolecular disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.76  E-value=0.13  Score=26.76  Aligned_cols=33  Identities=18%  Similarity=0.221  Sum_probs=16.3

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             6776689879-87999999999965990899835
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVER  138 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlEr  138 (549)
                      ...+|+|+|| |+-|++++..+...|.+++++++
T Consensus       169 ~g~~vlV~gg~G~vG~~aiqla~~~G~~vi~v~~  202 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG  202 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             8980799538669999999999982986677511


No 308
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding motifs, MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.71  E-value=0.07  Score=28.53  Aligned_cols=32  Identities=25%  Similarity=0.431  Sum_probs=27.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCE-EEEEEC
Q ss_conf             77668987987999999999965990-899835
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFN-PIIVER  138 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~-V~VlEr  138 (549)
                      ..+|+|||+|.-|..+|..|++.|+. .+|++.
T Consensus        31 ~~~VliiG~GglGs~~a~~La~~Gvg~i~lvD~   63 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF   63 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             597899886889999999999849986999768


No 309
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.69  E-value=0.098  Score=27.61  Aligned_cols=10  Identities=10%  Similarity=0.188  Sum_probs=4.1

Q ss_pred             HHHHHHCCCC
Q ss_conf             9999966971
Q T0604           281 FEMLHERGVY  290 (549)
Q Consensus       281 ~~~l~~~Gi~  290 (549)
                      .++++++|..
T Consensus       223 ~~~ak~lGa~  232 (398)
T 1kol_A          223 LAHAKAQGFE  232 (398)
T ss_dssp             HHHHHHTTCE
T ss_pred             HHHHHHCCCC
T ss_conf             9999980992


No 310
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, protein structure initiative; 1.88A {Caenorhabditis elegans}
Probab=93.61  E-value=0.051  Score=29.41  Aligned_cols=36  Identities=14%  Similarity=0.192  Sum_probs=30.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCC
Q ss_conf             6776689879879999999999659--90899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~  141 (549)
                      ..+||.|||.|--||..|..+|..|  ++|+.+|..+.
T Consensus         8 ~~~KI~ViGlGyVGl~~a~~lA~~g~~~~V~g~D~d~~   45 (481)
T 2o3j_A            8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA   45 (481)
T ss_dssp             CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCHH
T ss_conf             66759998778767999999981599985999989999


No 311
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.60  E-value=0.12  Score=27.07  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=31.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             77668987987999999999965990899835888
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+||+|.|+|.-|-..+-.|.+.|++|+.+.|...
T Consensus         3 m~kiLItGaG~iG~~l~~~L~~~g~~V~~~~R~~~   37 (286)
T 3gpi_A            3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ   37 (286)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             88699989219999999999978598999978712


No 312
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.58  E-value=0.05  Score=29.43  Aligned_cols=32  Identities=28%  Similarity=0.326  Sum_probs=28.2

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             668987987999999999965990899835888
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      +|.|||.|.-||.+|+.++ .|++|+.+|..+.
T Consensus         2 KI~ViGlGyVGl~~a~~~a-~g~~V~g~D~~~~   33 (402)
T 1dlj_A            2 KIAVAGSGYVGLSLGVLLS-LQNEVTIVDILPS   33 (402)
T ss_dssp             EEEEECCSHHHHHHHHHHT-TTSEEEEECSCHH
T ss_pred             EEEEECCCHHHHHHHHHHH-CCCCEEEEECCHH
T ss_conf             6999898767999999997-6998999989999


No 313
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.48  E-value=0.079  Score=28.22  Aligned_cols=32  Identities=25%  Similarity=0.230  Sum_probs=15.0

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             76689879879999999999659908998358
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      .+|+|+|+|.+|+.|+..+.+.|..|.+++..
T Consensus       173 akv~viG~G~~g~~A~~~a~~lga~v~~~d~~  204 (401)
T 1x13_A          173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR  204 (401)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHCCCEEEEEEECCC
T ss_conf             54899777622666998853772699984364


No 314
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.45  E-value=0.087  Score=27.94  Aligned_cols=22  Identities=18%  Similarity=0.273  Sum_probs=9.5

Q ss_pred             EEEEECCCCHHHHHHHHHHCCC
Q ss_conf             6899318876799999996697
Q T0604           268 HVVLAVGHSARDTFEMLHERGV  289 (549)
Q Consensus       268 ~VVlAtGhsard~~~~l~~~Gi  289 (549)
                      .+|+..|.-++....+|...|.
T Consensus       160 v~viG~G~~g~~~a~~l~~~g~  181 (300)
T 2rir_A          160 VAVLGLGRTGMTIARTFAALGA  181 (300)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC
T ss_pred             EEEECCCHHHHHHHHHHHHCCC
T ss_conf             9998988899999999987799


No 315
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A*
Probab=93.41  E-value=0.049  Score=29.48  Aligned_cols=34  Identities=24%  Similarity=0.265  Sum_probs=29.9

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCC
Q ss_conf             76689879879999999999659--90899835888
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKE  141 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G--~~V~VlErg~~  141 (549)
                      .+|.|||.|--||..|..||..|  ++|+.+|.++.
T Consensus         6 ~kI~ViGlGyVGl~~a~~lA~~g~~~~V~g~Did~~   41 (467)
T 2q3e_A            6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES   41 (467)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf             779998978407999999997399984999989999


No 316
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.36  E-value=0.08  Score=28.16  Aligned_cols=31  Identities=19%  Similarity=0.155  Sum_probs=28.4

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             6689879879999999999659908998358
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      +|.|+|+|.-|...|..|++.|.+|.++-|.
T Consensus         2 kI~ViGaGa~GtAlA~~l~~~g~~V~l~~r~   32 (335)
T 1txg_A            2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTE   32 (335)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCCEEEEECCG
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf             8999896999999999999889968999727


No 317
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- MESO-diaminopimelate ligase; structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis MC58}
Probab=93.33  E-value=0.12  Score=27.13  Aligned_cols=34  Identities=15%  Similarity=0.164  Sum_probs=30.1

Q ss_pred             CCCCEEEECCCHHHHHH-HHHHHHCCCEEEEEECC
Q ss_conf             67766898798799999-99999659908998358
Q T0604           106 LTERPIVIGFGPCGLFA-GLVLAQMGFNPIIVERG  139 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~A-Al~La~~G~~V~VlErg  139 (549)
                      ..++|-+||-|-+||.+ |..|.++|++|..-|..
T Consensus         3 ~~k~ih~iGigg~Gms~lA~~L~~~G~~V~gsD~~   37 (326)
T 3eag_A            3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAK   37 (326)
T ss_dssp             CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             87789999848889999999999789929999799


No 318
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=93.30  E-value=0.13  Score=26.76  Aligned_cols=26  Identities=15%  Similarity=-0.015  Sum_probs=19.8

Q ss_pred             ECEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             05689931887679999999669711
Q T0604           266 SRHVVLAVGHSARDTFEMLHERGVYM  291 (549)
Q Consensus       266 ad~VVlAtGhsard~~~~l~~~Gi~~  291 (549)
                      -..+|+--||-|+-...++..+|.++
T Consensus       205 ~~L~IfGaGhva~~La~la~~lgf~V  230 (386)
T 2we8_A          205 PRMLVFGAIDFAAAVAQQGAFLGYRV  230 (386)
T ss_dssp             CEEEEECCSTHHHHHHHHHHHTTCEE
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEE
T ss_conf             62688588567999999998649305


No 319
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.25  E-value=0.17  Score=26.09  Aligned_cols=30  Identities=27%  Similarity=0.434  Sum_probs=12.5

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             766898798799999999996599089983
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVE  137 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlE  137 (549)
                      .+|+|+|+|-+|+.|+..+.+.|..|.+++
T Consensus       169 akv~ViGag~ag~~A~~~a~~lga~v~~~d  198 (377)
T 2vhw_A          169 ADVVVIGAGTAGYNAARIANGMGATVTVLD  198 (377)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCCCCCHHHHHHHHCCCEEEECC
T ss_conf             548997787425166888862798899515


No 320
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, transferase/biosynthetic protein complex; 1.98A {Escherichia coli K12} PDB: 1zfn_A* 1zkm_A
Probab=93.25  E-value=0.094  Score=27.73  Aligned_cols=32  Identities=28%  Similarity=0.491  Sum_probs=27.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCE-EEEEEC
Q ss_conf             77668987987999999999965990-899835
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFN-PIIVER  138 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~-V~VlEr  138 (549)
                      ..+|+|||+|.-|-.+|..|++.|+. .+|++.
T Consensus        28 ~~~VliiG~GglGs~ia~~La~~Gvg~i~lvD~   60 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADD   60 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             698899866889999999998645882576178


No 321
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=93.24  E-value=0.096  Score=27.67  Aligned_cols=35  Identities=17%  Similarity=0.109  Sum_probs=30.7

Q ss_pred             CCCEEEECCCHHHHHH-HHHHHHCCCEEEEEECCCC
Q ss_conf             7766898798799999-9999965990899835888
Q T0604           107 TERPIVIGFGPCGLFA-GLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~A-Al~La~~G~~V~VlErg~~  141 (549)
                      .-||-+||.|-+||.+ |..|.++|++|...++...
T Consensus        12 ~m~ih~iGigg~Gms~lA~~L~~~G~~V~gsD~~~~   47 (469)
T 1j6u_A           12 HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEET   47 (469)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             777999988699999999999968995999829999


No 322
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, short chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=93.22  E-value=0.17  Score=26.04  Aligned_cols=46  Identities=11%  Similarity=0.026  Sum_probs=31.7

Q ss_pred             CCCCCCCCCCCCCCCCEEEE--CCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             66566777887767766898--79879999999999659908998358
Q T0604            94 MEYKFVAKAPENLTERPIVI--GFGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus        94 ~~~~~~~~~~~~~~~rVVVV--GaGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      ..+..|...-+++.-|+++|  |++--|...|..|++.|++|++..+.
T Consensus         7 ~~~~~~~~~~~~L~GK~alITGgs~GIG~aiA~~la~~G~~V~i~~~~   54 (274)
T 1ja9_A            7 ITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS   54 (274)
T ss_dssp             ---------CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf             988999999988999989996898689999999999879989997189


No 323
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=93.22  E-value=0.14  Score=26.64  Aligned_cols=40  Identities=18%  Similarity=0.321  Sum_probs=34.8

Q ss_pred             CCCCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             776776689879-8799999999996599089983588832
Q T0604           104 ENLTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       104 ~~~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      -+|+++|+|.|| |.-|-..+..|.+.|++|+.+.|.....
T Consensus        11 ~~M~k~vLITGatGfIGs~l~~~Ll~~g~~V~~i~r~~~~~   51 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD   51 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf             80675499975887899999999997849899998999765


No 324
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Porphyromonas gingivalis W83}
Probab=93.16  E-value=0.043  Score=29.88  Aligned_cols=35  Identities=26%  Similarity=0.363  Sum_probs=29.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC------EEEEEECCCC
Q ss_conf             7766898798799999999996599------0899835888
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF------NPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~------~V~VlErg~~  141 (549)
                      +-||.|||+|.-|.+-|..|+++|.      +|+++-|+..
T Consensus         8 ~MkI~IvGaGaiG~~~a~~L~~~g~~~~~~~~Vt~i~R~~~   48 (317)
T 2qyt_A            8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARGAH   48 (317)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHH
T ss_conf             89899999689999999999975999887416799932899


No 325
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.15  E-value=0.15  Score=26.41  Aligned_cols=36  Identities=14%  Similarity=0.275  Sum_probs=29.9

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCC
Q ss_conf             67766898798799999999996599-0899835888
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~  141 (549)
                      ++.||.|||+|--|..+|+.|+..+. +..|++....
T Consensus         3 ~~~KI~IiGaG~VG~~~a~~l~~~~~~el~LiD~~~~   39 (322)
T 1t2d_A            3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN   39 (322)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             9997999897989999999997189987999879998


No 326
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii ME49} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.13  E-value=0.17  Score=26.18  Aligned_cols=37  Identities=19%  Similarity=0.214  Sum_probs=30.8

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCC
Q ss_conf             767766898798799999999996599-0899835888
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKE  141 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~  141 (549)
                      ...+||.|||+|--|..+|+.|+..++ ++.|++....
T Consensus         7 ~~~~KI~IiGaG~VG~~~A~~l~~~~l~el~LiDi~~~   44 (331)
T 1pzg_A            7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG   44 (331)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             78980899897989999999997079987999928999


No 327
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.12  E-value=0.063  Score=28.82  Aligned_cols=40  Identities=15%  Similarity=0.070  Sum_probs=33.8

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCC
Q ss_conf             877677668987987999999999965-9908998358883
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQM-GFNPIIVERGKEV  142 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~-G~~V~VlErg~~v  142 (549)
                      ...|.++|+|+|+|-.|-.+|..|++. +++++|.+|..+-
T Consensus        19 ~~~m~kkIlvlGaG~vG~~~~~~L~~~~~~~i~v~~r~~~~   59 (467)
T 2axq_A           19 GRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLAN   59 (467)
T ss_dssp             ----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHH
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHH
T ss_conf             13578819998988899999999982899349999699999


No 328
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.08  E-value=0.12  Score=27.02  Aligned_cols=10  Identities=20%  Similarity=0.531  Sum_probs=4.1

Q ss_pred             HHHHHHCCCC
Q ss_conf             9999966971
Q T0604           281 FEMLHERGVY  290 (549)
Q Consensus       281 ~~~l~~~Gi~  290 (549)
                      .++++++|..
T Consensus       223 l~~a~~lGa~  232 (398)
T 2dph_A          223 LKLLSDAGFE  232 (398)
T ss_dssp             HHHHHTTTCE
T ss_pred             HHHHHHCCCE
T ss_conf             1234314750


No 329
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.04  E-value=0.2  Score=25.62  Aligned_cols=32  Identities=19%  Similarity=0.268  Sum_probs=18.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             77668987987999999999965990899835
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVER  138 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlEr  138 (549)
                      +.+|+|+|+|-+|+.|+..+.+.|..|.+++.
T Consensus       167 pa~v~viGaG~ag~~A~~ta~~lGa~v~~~d~  198 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDI  198 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
T ss_conf             70367725740234788999864986999727


No 330
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 1yov_B 1r4m_B 1r4n_B*
Probab=93.02  E-value=0.13  Score=26.82  Aligned_cols=33  Identities=30%  Similarity=0.304  Sum_probs=29.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECC
Q ss_conf             7766898798799999999996599-08998358
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERG  139 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg  139 (549)
                      ..||+|||+|.-|...|..|++.|+ ++.|++..
T Consensus        40 ~~kVlvvG~GglG~ei~k~La~~Gvg~i~ivD~D   73 (434)
T 1tt5_B           40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD   73 (434)
T ss_dssp             TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             6929998978899999999998089869999799


No 331
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.02  E-value=0.12  Score=27.05  Aligned_cols=37  Identities=19%  Similarity=0.290  Sum_probs=32.7

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6776689879-879999999999659908998358883
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      +++||+|.|| |.-|-..+-.|.+.|++|+++.|....
T Consensus         3 ~k~kILVtGatG~iG~~lv~~L~~~g~~V~~l~R~~~~   40 (308)
T 1qyc_A            3 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTA   40 (308)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             99989998998289999999999787979999889755


No 332
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein ligase, unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.01  E-value=0.097  Score=27.64  Aligned_cols=36  Identities=17%  Similarity=0.375  Sum_probs=29.9

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCC
Q ss_conf             7766898798799999999996599--08998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~v  142 (549)
                      .+||.|||+|--|-.+|+.|+..|+  +++|++..+.+
T Consensus        14 ~~KI~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~e~~   51 (303)
T 2i6t_A           14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGT   51 (303)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC---
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCH
T ss_conf             77499999798999999999845999869999799871


No 333
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.00  E-value=0.12  Score=27.00  Aligned_cols=35  Identities=26%  Similarity=0.447  Sum_probs=30.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCC
Q ss_conf             7766898798799999999996599--0899835888
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~  141 (549)
                      .+||.|||+|.-|..+|+.|+..|+  +..|++....
T Consensus         5 ~~Kv~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~~~   41 (318)
T 1ez4_A            5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKD   41 (318)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             9879998979899999999981799877999818997


No 334
>3bmj_A Pteridine reductase; PTR1, short chain dehydrogenase, inhibitor, oxidoreductase; HET: NAP DX7; 1.60A {Trypanosoma brucei brucei} PDB: 3bmc_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmd_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3jq6_A* 3jq7_A* 3jq8_A* 3jq9_A* 3jqa_A* 3jqb_A* ...
Probab=92.97  E-value=0.14  Score=26.56  Aligned_cols=38  Identities=16%  Similarity=0.209  Sum_probs=31.3

Q ss_pred             CCCCCCCEEEE--CCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             87767766898--798799999999996599089983588
Q T0604           103 PENLTERPIVI--GFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       103 ~~~~~~rVVVV--GaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      ...|..||+||  |++--|...|..|++.|++|++..|..
T Consensus        18 ~~~l~gkVAlVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~   57 (288)
T 3bmj_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS   57 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             9998999899948788899999999998799899996980


No 335
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; YP_263340.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.95  E-value=0.12  Score=27.06  Aligned_cols=34  Identities=9%  Similarity=0.024  Sum_probs=30.8

Q ss_pred             CCCEEEECCCHHHHHH-HHHHHHCCCEEEEEECCC
Q ss_conf             7766898798799999-999996599089983588
Q T0604           107 TERPIVIGFGPCGLFA-GLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~A-Al~La~~G~~V~VlErg~  140 (549)
                      .+||.+||-|-+||.+ |..|+++|++|.+-++..
T Consensus        19 g~~ih~iGigg~GmsalA~~l~~~G~~V~gsD~~~   53 (524)
T 3hn7_A           19 GMHIHILGICGTFMGSLALLARALGHTVTGSDANI   53 (524)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred             CCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             98899996788999999999996899499990999


No 336
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.73  E-value=0.083  Score=28.05  Aligned_cols=37  Identities=24%  Similarity=0.372  Sum_probs=33.3

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7677668987987999999999965990899835888
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .|..||-|||-|--|.-.|..|++.|++|.+++|.+.
T Consensus         3 ~m~mkIg~IGlG~MG~~la~~L~~~G~~v~v~dr~~~   39 (299)
T 1vpd_A            3 AMTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE   39 (299)
T ss_dssp             ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCCEEEEEEEHHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             6445188981089889999999978996999939999


No 337
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 1llc_A*
Probab=92.73  E-value=0.15  Score=26.43  Aligned_cols=37  Identities=22%  Similarity=0.247  Sum_probs=30.7

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             7767766898798799999999996599--089983588
Q T0604           104 ENLTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       104 ~~~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      +...+||.|||+|.-|..+|+.|+..|+  +..|++...
T Consensus         6 ~k~~~KV~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~~   44 (326)
T 2zqz_A            6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK   44 (326)
T ss_dssp             CCCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             788997999898989999999998279988799992788


No 338
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoid, oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.72  E-value=0.19  Score=25.88  Aligned_cols=37  Identities=19%  Similarity=0.195  Sum_probs=31.9

Q ss_pred             CCCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             76776689879-87999999999965990899835888
Q T0604           105 NLTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       105 ~~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      +.+.||+|+|| |.-|-..+-.|.+.|++|.++-|...
T Consensus         8 s~k~kVlV~GaTG~iG~~iv~~Ll~~g~~V~~l~R~~~   45 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGP   45 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             99991999899848999999999968997899989998


No 339
>3gr6_A Enoyl-[acyl-carrier-protein] reductase [NADH]; enoyl reductase, NADP, triclosan, oxidoreductase; HET: NAP TCL; 2.28A {Staphylococcus aureus} PDB: 3gns_A* 3gnt_A
Probab=92.61  E-value=0.12  Score=26.96  Aligned_cols=36  Identities=17%  Similarity=0.291  Sum_probs=30.5

Q ss_pred             CCCEEEECCC---HHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             7766898798---79999999999659908998358883
Q T0604           107 TERPIVIGFG---PCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaG---pAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .+.++|.||+   --|..+|..|++.|++|++..|.+..
T Consensus        10 gK~~lITGass~~GIG~aiA~~la~~Ga~Vvi~~r~~~~   48 (260)
T 3gr6_A           10 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERS   48 (260)
T ss_dssp             SCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             998999899998479999999999879999999688888


No 340
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.61  E-value=0.13  Score=26.87  Aligned_cols=32  Identities=13%  Similarity=0.124  Sum_probs=29.5

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             77668987987999999999965990899835
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVER  138 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlEr  138 (549)
                      .++|+|||+|..+.-=+..|.+.|.+|+|+-.
T Consensus        12 ~~~vlvvGgG~vA~rK~~~ll~~ga~v~via~   43 (457)
T 1pjq_A           12 DRDCLIVGGGDVAERKARLLLEAGARLTVNAL   43 (457)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTBEEEEEES
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
T ss_conf             98399988989999999999868987999938


No 341
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.60  E-value=0.16  Score=26.21  Aligned_cols=35  Identities=20%  Similarity=0.343  Sum_probs=31.6

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             776689879-87999999999965990899835888
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+||+|+|| |.-|...+-.|.++|++|.++-|.+.
T Consensus         3 ~kkIlI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~   38 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS   38 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             888999999988999999999978698999984825


No 342
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.59  E-value=0.19  Score=25.74  Aligned_cols=32  Identities=28%  Similarity=0.506  Sum_probs=24.0

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf             76776689879879999999999659908998
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIV  136 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~Vl  136 (549)
                      ....+|+|.|+|+.|+.++..+...|..++++
T Consensus       212 ~~g~~VlI~GaG~vG~~ai~~a~~~g~~~v~~  243 (404)
T 3ip1_A          212 RPGDNVVILGGGPIGLAAVAILKHAGASKVIL  243 (404)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEE
T ss_conf             89899999898889999999999848964999


No 343
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.71A {Thermus thermophilus HB8}
Probab=92.58  E-value=0.23  Score=25.29  Aligned_cols=30  Identities=23%  Similarity=0.370  Sum_probs=14.0

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             766898798799999999996599089983
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVE  137 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlE  137 (549)
                      .+|+|+|+|.+|+.|+..+.+.|..|..++
T Consensus       167 ~kv~v~GaG~ag~~Ai~ta~~lGa~v~~~d  196 (369)
T 2eez_A          167 ASVVILGGGTVGTNAAKIALGMGAQVTILD  196 (369)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEEECCCEECHHHHHHHHHCCCEEEEEC
T ss_conf             069995796034899999863698699965


No 344
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.56  E-value=0.13  Score=26.89  Aligned_cols=37  Identities=14%  Similarity=0.088  Sum_probs=32.1

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6776689879-879999999999659908998358883
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ..++|.|||+ |.=|...|..|.+.|++|.+++|.+..
T Consensus        10 ~~k~i~iiG~~G~mG~~~a~~l~~~g~~v~~~d~~~~~   47 (286)
T 3c24_A           10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEG   47 (286)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHH
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             59999998089899999999999789969999388899


No 345
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X- RAY crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.53  E-value=0.12  Score=27.01  Aligned_cols=35  Identities=26%  Similarity=0.200  Sum_probs=31.1

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             66898798799999999996599089983588832
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      ||.|||.|.-|-.-|..|.+.|+.|.+++|.+...
T Consensus         2 KI~iIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~   36 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTC   36 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             EEEEEEECHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf             89999009999999999996889799998999999


No 346
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.52  E-value=0.17  Score=26.09  Aligned_cols=33  Identities=18%  Similarity=0.116  Sum_probs=30.0

Q ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             6689879-87999999999965990899835888
Q T0604           109 RPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       109 rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ||+|+|| |.-|-..+-.|.++|++|+++-|.+.
T Consensus         2 kIlV~GatG~iG~~l~~~L~~~G~~V~~~~R~~~   35 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG   35 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             6999999848999999999978598999989867


No 347
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.52  E-value=0.16  Score=26.20  Aligned_cols=22  Identities=27%  Similarity=0.415  Sum_probs=10.9

Q ss_pred             EEEEECCCCHHHHHHHHHHCCC
Q ss_conf             6899318876799999996697
Q T0604           268 HVVLAVGHSARDTFEMLHERGV  289 (549)
Q Consensus       268 ~VVlAtGhsard~~~~l~~~Gi  289 (549)
                      .+|+..|+.||-....|...|.
T Consensus       132 vlilGaGGaarai~~~l~~~g~  153 (275)
T 2hk9_A          132 ILVLGAGGASRAVIYALVKEGA  153 (275)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC
T ss_pred             EEEECCHHHHHHHHHHHHHCCC
T ss_conf             7886633889999999997599


No 348
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.48  E-value=0.18  Score=26.00  Aligned_cols=35  Identities=14%  Similarity=0.275  Sum_probs=29.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCC
Q ss_conf             7766898798799999999996599-0899835888
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~  141 (549)
                      ++||.|||+|.-|-.+|+.|++.+. +..|++..+.
T Consensus         4 ~~KV~IiGaG~VG~~~a~~l~~~~~~el~L~Di~~~   39 (317)
T 2ewd_A            4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG   39 (317)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             997999898989999999998289987999958999


No 349
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.41  E-value=0.17  Score=26.16  Aligned_cols=34  Identities=18%  Similarity=0.261  Sum_probs=18.2

Q ss_pred             ECCCCEEEECEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             8678489705689931887679999999669711
Q T0604           258 LSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYM  291 (549)
Q Consensus       258 t~~g~~i~ad~VVlAtGhsard~~~~l~~~Gi~~  291 (549)
                      +.-|..-++..+|+..|.-+.-.-+.+..+|...
T Consensus       165 ~~~g~v~~~kv~viG~G~~g~~a~~~a~~lGa~v  198 (384)
T 1l7d_A          165 TAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVV  198 (384)
T ss_dssp             ETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred             CCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEE
T ss_conf             1567877750699725467767889998669879


No 350
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.41  E-value=0.11  Score=27.26  Aligned_cols=10  Identities=20%  Similarity=0.039  Sum_probs=4.9

Q ss_pred             CCEEEECCCH
Q ss_conf             7668987987
Q T0604           108 ERPIVIGFGP  117 (549)
Q Consensus       108 ~rVVVVGaGp  117 (549)
                      -.|+-+|.+.
T Consensus        65 G~V~~~g~~v   74 (339)
T 1rjw_A           65 GIVEEVGPGV   74 (339)
T ss_dssp             EEEEEECTTC
T ss_pred             EEEEEECCCC
T ss_conf             9997631577


No 351
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.38  E-value=0.22  Score=25.46  Aligned_cols=23  Identities=17%  Similarity=0.273  Sum_probs=13.4

Q ss_pred             CEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             56899318876799999996697
Q T0604           267 RHVVLAVGHSARDTFEMLHERGV  289 (549)
Q Consensus       267 d~VVlAtGhsard~~~~l~~~Gi  289 (549)
                      ..+|+..|+.||-...-|.+.|.
T Consensus       121 ~vlilGaGGaa~ai~~al~~~g~  143 (271)
T 1nyt_A          121 RILLIGAGGASRGVLLPLLSLDC  143 (271)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC
T ss_pred             EEEEEECHHHHHHHHHHHHHCCC
T ss_conf             79997047888999999996798


No 352
>6ldh_A M4 APO-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); 2.00A {Squalus acanthias} SCOP: c.2.1.5 d.162.1.1 PDB: 8ldh_A* 1ldm_A* 9ldt_A* 9ldb_A* 1i10_A* 3ldh_A* 3h3f_A* 1t2f_A* 1i0z_A* 5ldh_A* 1v6a_A*
Probab=92.37  E-value=0.28  Score=24.74  Aligned_cols=34  Identities=15%  Similarity=0.322  Sum_probs=29.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             7766898798799999999996599--089983588
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      ..||.|||||--|-.+|+.|+..++  +..|++..+
T Consensus        21 ~~KV~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~   56 (330)
T 6ldh_A           21 YNKITVVGVGAVGMACAISILMKDLADEVALVDVME   56 (330)
T ss_dssp             SSEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSCH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             985999897989999999998379988699992899


No 353
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.28  E-value=0.25  Score=25.05  Aligned_cols=34  Identities=24%  Similarity=0.209  Sum_probs=30.4

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             776689879-8799999999996599089983588
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .+||+|.|| |.-|-..+-.|.++|++|+.+-|.+
T Consensus         4 m~kIlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~   38 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP   38 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             99899988999899999999997839899998685


No 354
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomics; HET: ADN; 1.40A {Thermus thermophilus HB8} SCOP: c.2.1.2
Probab=92.26  E-value=0.2  Score=25.73  Aligned_cols=36  Identities=22%  Similarity=0.393  Sum_probs=29.5

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             6776689879-87999999999965990899835888
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |.|.++|.|| +-=|...|..|++.|++|++..|.+.
T Consensus         1 m~K~alITGas~GIG~aiA~~la~~Ga~Vi~~~~~~~   37 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   37 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             9989999788888999999999987998999978632


No 355
>3lov_A Protoporphyrinogen oxidase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=92.25  E-value=0.052  Score=29.36  Aligned_cols=52  Identities=23%  Similarity=0.351  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECC
Q ss_conf             79999999999996698899813433204058758999986784897056899318
Q T0604           219 LVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVG  274 (549)
Q Consensus       219 ~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtG  274 (549)
                      ...+.+.|.+.+  .+..++++++|+.|..+++.+. +.+ ++..+.+|.||+|+.
T Consensus       235 ~~~~~~~l~~~~--~~~~v~~~~~V~~I~~~~~~~~-~~~-~~~~~~~d~VV~a~p  286 (475)
T 3lov_A          235 LESLIERLEEVL--ERSEIRLETPLLAISREDGRYR-LKT-DHGPEYADYVLLTIP  286 (475)
T ss_dssp             HHHHHHHHHHHC--SSCEEESSCCCCEEEEETTEEE-EEC-TTCCEEESEEEECSC
T ss_pred             HHHHHHHHHHHH--CCCCEEEEEEEEEEEEECCEEE-EEC-CCCCEEEEEEEECCC
T ss_conf             899999999873--2586032345799999456279-960-687267433685278


No 356
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=92.23  E-value=0.17  Score=26.11  Aligned_cols=35  Identities=20%  Similarity=0.173  Sum_probs=30.7

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             76689879879999999999659908998358883
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      +||.|+|+|-=|-+.|..+.+.|++|++++..+..
T Consensus         2 Kki~IlG~GQLgrml~~Aa~~lG~~v~v~d~~~~~   36 (355)
T 3eth_A            2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (355)
T ss_dssp             CEEEEESCSHHHHHHHHHHGGGTCEEEEECTTCCG
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             99999889899999999999789989998289996


No 357
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=92.20  E-value=0.069  Score=28.57  Aligned_cols=58  Identities=9%  Similarity=0.102  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCC--CEEEECEEEEECCCCHHHHH
Q ss_conf             99999999999669889981343320405875899998678--48970568993188767999
Q T0604           221 TMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG--EEIKSRHVVLAVGHSARDTF  281 (549)
Q Consensus       221 ~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g--~~i~ad~VVlAtGhsard~~  281 (549)
                      ...+.+.+.+++.|++++++++|+.+.  ++++. +...+|  +++++|.+|+|+|..+.+..
T Consensus       201 ~~~~~~~~~l~~~gI~~~~~~~V~~v~--~~~~~-~~~~~g~~~~i~~d~vi~~~g~~~~~~~  260 (430)
T 3h28_A          201 ASKRLVEDLFAERNIDWIANVAVKAIE--PDKVI-YEDLNGNTHEVPAKFTMFMPSFQGPEVV  260 (430)
T ss_dssp             THHHHHHHHHHHTTCEEECSCEEEEEC--SSEEE-EECTTSCEEEEECSEEEEECEEECCHHH
T ss_pred             HHHHHHHHHHHHCCEEEEECCEEEEEE--CCCEE-EEECCCCCEECCCCEEEEECCCCCCHHH
T ss_conf             999999999997691999685689992--89508-9953886022035427990474778799


No 358
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.14  E-value=0.14  Score=26.55  Aligned_cols=29  Identities=24%  Similarity=0.189  Sum_probs=11.7

Q ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCEEEEE
Q ss_conf             76689879-879999999999659908998
Q T0604           108 ERPIVIGF-GPCGLFAGLVLAQMGFNPIIV  136 (549)
Q Consensus       108 ~rVVVVGa-GpAGL~AAl~La~~G~~V~Vl  136 (549)
                      .+|+|.|| |+-|++|+..+...|++|+.+
T Consensus       142 ~~vlV~Ga~g~vG~~a~qla~~~G~~Vi~~  171 (327)
T 1qor_A          142 EQFLFHAAAGGVGLIACQWAKALGAKLIGT  171 (327)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             999998995399999999999859989997


No 359
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus HB8} PDB: 1x1e_A* 2ekq_A
Probab=92.14  E-value=0.22  Score=25.36  Aligned_cols=36  Identities=22%  Similarity=0.302  Sum_probs=29.8

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             6776689879-87999999999965990899835888
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |+|.++|.|| +--|..+|..|++.|++|++..|..+
T Consensus         1 M~K~alITGas~GIG~aia~~la~~G~~V~i~~r~~~   37 (239)
T 2ekp_A            1 MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE   37 (239)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             9988999779758999999999987999999979999


No 360
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.01  E-value=0.23  Score=25.27  Aligned_cols=35  Identities=20%  Similarity=0.237  Sum_probs=30.0

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             67766898798799999999996599--089983588
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      ..+||.|||+|--|-..|+.|+..++  +..|++...
T Consensus         6 ~~~KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~   42 (318)
T 1y6j_A            6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK   42 (318)
T ss_dssp             -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             9992899897989999999998379998599990899


No 361
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=91.99  E-value=0.18  Score=26.00  Aligned_cols=36  Identities=14%  Similarity=0.167  Sum_probs=31.7

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879-879999999999659908998358883
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ++||+|.|| |.-|-..+..|.++|++|+++-|....
T Consensus         2 ~~KILVtGatG~iG~~lv~~L~~~g~~V~~l~R~~~~   38 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTIT   38 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             9879998998589999999999788938999778643


No 362
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 2px9_A
Probab=91.97  E-value=0.19  Score=25.81  Aligned_cols=33  Identities=24%  Similarity=0.270  Sum_probs=28.4

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEECC
Q ss_conf             7766898798799999999996599-08998358
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERG  139 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlErg  139 (549)
                      ..||.|||+|.-|...+..|+..|+ +++|++..
T Consensus        17 ~skVlvVGaGgiGce~lk~La~~Gvg~i~iiD~D   50 (640)
T 1y8q_B           17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLD   50 (640)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             7968998988899999999998389889998499


No 363
>2yr5_A Pro-enzyme of L-phenylalanine oxidase; amino oxidase, flavoenzyme, oxidoreductase; HET: FAD; 1.25A {Pseudomonas SP} PDB: 2yr4_A* 2yr6_A*
Probab=91.96  E-value=0.084  Score=28.04  Aligned_cols=42  Identities=14%  Similarity=0.150  Sum_probs=30.3

Q ss_pred             CCCCEEECCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             8985420123533578-99999999999999999999752179
Q T0604           508 LKGFYPAGEGAGYAGG-ILSAGIDGIKVAEAVARDIVAAMENA  549 (549)
Q Consensus       508 i~GLY~~GEgaGyagG-I~saa~~G~~~a~~i~~~~~~~~~~~  549 (549)
                      -..||||||.+=+.+| |-.|-..|+|||.+|+..+.....+|
T Consensus       644 ~~rl~fAGE~~S~~~gwieGAl~Sa~rAa~~Ii~~~~~~~~~~  686 (721)
T 2yr5_A          644 DNRFFIASDSYSHLGGWLEGAFMSALNAVAGLIVRANRGDVSA  686 (721)
T ss_dssp             CCCEEECSGGGSSCTTSHHHHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             CCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf             8858999765478873699999999999999999843998055


No 364
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding domain, 37 amino acid insertional region; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis H37RV} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.92  E-value=0.18  Score=26.03  Aligned_cols=27  Identities=15%  Similarity=0.263  Sum_probs=14.3

Q ss_pred             CCCCCEEECCHHHHCHHHHHHHHHH-HHHHCCCC
Q ss_conf             0057604526254031899999999-98861222
Q T0604           441 SFTPGIKLTDLSKALPPFAVEAIRE-AIPAFDRK  473 (549)
Q Consensus       441 s~~~~~~~~~L~~~lP~~v~~~l~~-~l~~f~~~  473 (549)
                      .+.|++++      +|+.+-+.+.. .|..|+-+
T Consensus       440 ~~~~gV~~------lP~~iD~~VA~~~L~~lg~~  467 (494)
T 3ce6_A          440 EYDNEVYR------LPKHLDEKVARIHVEALGGH  467 (494)
T ss_dssp             GCCSSEEC------CCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCCCEEE------CCHHHHHHHHHHHHHHCCCE
T ss_conf             47897367------98899999999999865977


No 365
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=91.90  E-value=0.16  Score=26.24  Aligned_cols=38  Identities=5%  Similarity=0.072  Sum_probs=30.4

Q ss_pred             CCCEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             776689879-8--7999999999965990899835888321
Q T0604           107 TERPIVIGF-G--PCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       107 ~~rVVVVGa-G--pAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      .|+++|.|| |  --|...|..|++.|++|++..|++....
T Consensus         6 gK~~lITGaag~~GIG~aiA~~la~~Ga~V~i~~r~~~~~~   46 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK   46 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
T ss_conf             98899989999738999999999987999999968889999


No 366
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=91.73  E-value=0.33  Score=24.27  Aligned_cols=43  Identities=16%  Similarity=0.074  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCCEEEECC--CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             77788776776689879--87999999999965990899835888
Q T0604            99 VAKAPENLTERPIVIGF--GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus        99 ~~~~~~~~~~rVVVVGa--GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      +..-+..+..||+||=+  +--|...|..|++.|++|++..|...
T Consensus        19 ~~~M~~~L~gKvalITGas~GIG~aia~~la~~Ga~Vv~~~r~~~   63 (270)
T 3ftp_A           19 PGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA   63 (270)
T ss_dssp             ----CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             898899879998999287868999999999986999999979889


No 367
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=91.73  E-value=0.15  Score=26.54  Aligned_cols=58  Identities=9%  Similarity=0.144  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCEEEEEEECCCCEEEECEEEEECCCCHHHHH
Q ss_conf             799999999999966988998134332040587589999867848970568993188767999
Q T0604           219 LVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTF  281 (549)
Q Consensus       219 ~~~vv~~L~~~l~~~G~~i~~~t~V~~i~~~~g~v~gV~t~~g~~i~ad~VVlAtGhsard~~  281 (549)
                      ...+.+.+.+.+++.|++++.+++|+.+..  ++   |.+.+|+++++|.+|.|+|..+.+.+
T Consensus       217 ~~~~~~~~~~~l~~~gV~~~~~~~v~~v~~--~~---v~~~~g~~i~~D~vi~~~g~~~~~~l  274 (409)
T 3h8l_A          217 SPNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE---IVDEKGNTIPADITILLPPYTGNPAL  274 (409)
T ss_dssp             CHHHHHHHHHHHHHHTCEEECSCCEEEECS--SE---EEETTSCEEECSEEEEECCEECCHHH
T ss_pred             CHHHHHHHHHHHHHHCCEEEEEEEEEEEEC--CC---CCCCCCCEEEECCCEEEEEEECCCHH
T ss_conf             589999999998740324886557775303--43---21246743652021287665328246


No 368
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=91.72  E-value=0.22  Score=25.39  Aligned_cols=36  Identities=19%  Similarity=0.207  Sum_probs=31.4

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879-879999999999659908998358883
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      +.||+|+|| |--|-..+-.|.+.|++|.++-|....
T Consensus         4 k~KIlVtGatG~iG~~lv~~L~~~g~~V~~~~R~~~~   40 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV   40 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             9989998999789999999999688979999899743


No 369
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative; 2.19A {Bacteroides fragilis nctc 9343}
Probab=91.71  E-value=0.17  Score=26.08  Aligned_cols=34  Identities=21%  Similarity=0.301  Sum_probs=29.5

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEE-EEECCC
Q ss_conf             7766898798799999999996599089-983588
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPI-IVERGK  140 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~-VlErg~  140 (549)
                      ..+|.|||+|.-|-.-|..|.++|++|+ |+.|.+
T Consensus        10 ~~kI~iIG~G~mG~~la~~l~~~G~~v~~v~~r~~   44 (266)
T 3d1l_A           10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE   44 (266)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCH
T ss_conf             99899983119999999999988997799978999


No 370
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.70  E-value=0.29  Score=24.68  Aligned_cols=10  Identities=20%  Similarity=0.079  Sum_probs=4.7

Q ss_pred             CEEEECCCHH
Q ss_conf             6689879879
Q T0604           109 RPIVIGFGPC  118 (549)
Q Consensus       109 rVVVVGaGpA  118 (549)
                      .|+=+|.+..
T Consensus        72 ~V~~~G~~v~   81 (376)
T 1e3i_A           72 IVESVGPGVT   81 (376)
T ss_dssp             EEEEECTTCC
T ss_pred             EEEEECCCCC
T ss_conf             9999889986


No 371
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=91.64  E-value=0.3  Score=24.54  Aligned_cols=36  Identities=25%  Similarity=0.489  Sum_probs=31.4

Q ss_pred             CCCCEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668987-987999999999965990899835888
Q T0604           106 LTERPIVIG-FGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVG-aGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |++||+|.| .|--|-..+..|.+.|++|+++++-..
T Consensus         1 M~kkILVTGatGfIGs~lv~~Ll~~G~~V~~~d~~~~   37 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHN   37 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             9985899899978999999999978697999966773


No 372
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductase; oxidoreductase; 1.99A {Streptomyces coelicolor A3}
Probab=91.63  E-value=0.34  Score=24.25  Aligned_cols=40  Identities=25%  Similarity=0.233  Sum_probs=31.7

Q ss_pred             CCCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             76776689879-87999999999965990899835888321
Q T0604           105 NLTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       105 ~~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      .|+|.++|.|| +--|...|..|++.|++|++..|..+...
T Consensus        19 ~M~K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~   59 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE   59 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
T ss_conf             99898999688869999999999987998999989832226


No 373
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.63  E-value=0.25  Score=25.09  Aligned_cols=35  Identities=26%  Similarity=0.343  Sum_probs=30.0

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             67766898798799999999996599--089983588
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      .+.||.|||+|.-|..+|+.|+..|+  +..|++...
T Consensus         6 ~~~KV~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~~   42 (319)
T 1lld_A            6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK   42 (319)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             9975999996989999999998179998799992899


No 374
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=91.56  E-value=0.24  Score=25.14  Aligned_cols=32  Identities=22%  Similarity=0.234  Sum_probs=29.5

Q ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             6689879-8799999999996599089983588
Q T0604           109 RPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       109 rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      ||+|+|| |.-|-..+-.|.++|++|+++-|.+
T Consensus         2 KIlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~   34 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP   34 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             699999885799999999997869899998885


No 375
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, structural genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 1li4_A* 1a7a_A*
Probab=91.56  E-value=0.2  Score=25.62  Aligned_cols=11  Identities=18%  Similarity=0.344  Sum_probs=7.9

Q ss_pred             EECEEEEECCC
Q ss_conf             70568993188
Q T0604           265 KSRHVVLAVGH  275 (549)
Q Consensus       265 ~ad~VVlAtGh  275 (549)
                      .+|.+|-|||.
T Consensus       266 ~aDifvTaTGn  276 (436)
T 3h9u_A          266 EAHIFVTTTGN  276 (436)
T ss_dssp             TCSEEEECSSC
T ss_pred             HCCEEEEECCC
T ss_conf             58999994799


No 376
>3imf_A Short chain dehydrogenase; structural genomics, infectious diseases, center for structural genomics of infectious diseases, oxidoreductase; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=91.51  E-value=0.34  Score=24.19  Aligned_cols=37  Identities=24%  Similarity=0.276  Sum_probs=28.6

Q ss_pred             CCCCCEEEEC--CCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7677668987--987999999999965990899835888
Q T0604           105 NLTERPIVIG--FGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       105 ~~~~rVVVVG--aGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      +|+.||+||=  ++--|+..|..|++.|++|++..|..+
T Consensus         3 sLk~KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~   41 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKE   41 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             748298999389868999999999987998999979899


No 377
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Porphyromonas gingivalis atcc 33277}
Probab=91.49  E-value=0.26  Score=24.95  Aligned_cols=34  Identities=21%  Similarity=0.201  Sum_probs=29.1

Q ss_pred             CCCEEEEC-CCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             77668987-98799999999996599--089983588
Q T0604           107 TERPIVIG-FGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVG-aGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      .+||.||| +|.-|-.+|+.|+..++  +.+|++...
T Consensus         8 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~D~~~   44 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA   44 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred             CCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             9848999689669999999998479988699978877


No 378
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=91.47  E-value=0.34  Score=24.23  Aligned_cols=37  Identities=16%  Similarity=0.173  Sum_probs=29.3

Q ss_pred             CCCCCEEEE--CCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             767766898--7987999999999965990899835888
Q T0604           105 NLTERPIVI--GFGPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       105 ~~~~rVVVV--GaGpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .++.|++||  |++--|..+|..|++.|++|++..|..+
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~   41 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEA   41 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             889988999498868999999999987998999989989


No 379
>2ldx_A APO-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); 2.96A {Mus musculus} SCOP: c.2.1.5 d.162.1.1
Probab=91.44  E-value=0.33  Score=24.33  Aligned_cols=34  Identities=18%  Similarity=0.382  Sum_probs=29.4

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             7766898798799999999996599--089983588
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      ..||.|||+|.-|..+|+.|+..|+  +..|++...
T Consensus        19 ~~KI~IiGaG~VG~~~a~~l~~~~~~~el~L~D~~~   54 (331)
T 2ldx_A           19 RCKITVVGVGDVGMACAISILLKGLADELALVDADT   54 (331)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             882999897989999999998569988799983898


No 380
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} SCOP: c.3.1.6 PDB: 3fpz_A*
Probab=91.44  E-value=0.094  Score=27.73  Aligned_cols=43  Identities=19%  Similarity=0.321  Sum_probs=28.9

Q ss_pred             CCCCCCCCCCEEECCCCCHHH-----H-HHH-HHHHHHHHHHHHHHHHHH
Q ss_conf             743026898542012353357-----8-999-999999999999999997
Q T0604           502 DFQSVNLKGFYPAGEGAGYAG-----G-ILS-AGIDGIKVAEAVARDIVA  544 (549)
Q Consensus       502 tleS~~i~GLY~~GEgaGyag-----G-I~s-aa~~G~~~a~~i~~~~~~  544 (549)
                      +.+-..++|||.||..++...     | +.. +...|.+||+.|++.|.+
T Consensus       277 ~~~~t~~pgl~~aGda~~~v~g~~rmGptfgam~~sG~~AAe~i~~~l~~  326 (326)
T 2gjc_A          277 SGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFAA  326 (326)
T ss_dssp             CEECTTSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCEECCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             98198889999945364073887777707999999999999999998649


No 381
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A*
Probab=91.33  E-value=0.26  Score=24.97  Aligned_cols=35  Identities=17%  Similarity=0.321  Sum_probs=29.8

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             67766898798799999999996599--089983588
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      .++||.|||+|.-|-.+|+.|+..+.  +..|++...
T Consensus         5 ~~~KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~   41 (317)
T 3d0o_A            5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT   41 (317)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf             7983999897989999999997079988799980889


No 382
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.33  E-value=0.28  Score=24.78  Aligned_cols=35  Identities=23%  Similarity=0.342  Sum_probs=30.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             67766898798799999999996599--089983588
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      ..+||.|||||--|..+|+.|+..+.  +..|+|..+
T Consensus         5 ~~~KV~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~~   41 (316)
T 1ldn_A            5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE   41 (316)
T ss_dssp             TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             9986999997989999999998279988799980789


No 383
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehydrogenase, reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=91.32  E-value=0.39  Score=23.84  Aligned_cols=36  Identities=19%  Similarity=0.098  Sum_probs=31.8

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             6776689879-87999999999965990899835888
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+++|+|+|| |.-|-..+-.|.++|++|+++-|...
T Consensus         4 ~~k~IlVtGaTG~iG~~lv~~Ll~~G~~V~~l~R~~~   40 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK   40 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             9988999898708999999999968795999977853


No 384
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydrolase, cytoplasm, NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei 1710B} PDB: 3glq_A*
Probab=91.32  E-value=0.24  Score=25.15  Aligned_cols=24  Identities=21%  Similarity=0.266  Sum_probs=14.4

Q ss_pred             EEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             689931887679999999669711
Q T0604           268 HVVLAVGHSARDTFEMLHERGVYM  291 (549)
Q Consensus       268 ~VVlAtGhsard~~~~l~~~Gi~~  291 (549)
                      .+|+-.|.-++-.-..++..|...
T Consensus       280 v~ViGyG~iG~gvA~~~~~~G~~V  303 (494)
T 3d64_A          280 AVVAGYGDVGKGCAQSLRGLGATV  303 (494)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCEE
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEE
T ss_conf             999841789999999998688989


No 385
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=91.29  E-value=0.25  Score=25.10  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=30.7

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             76689879879999999999659908998358883
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .+|.|||+|--|.+.|..+.++|++|++++..+..
T Consensus         2 ~~i~iiG~g~~~r~~~~AA~~lG~~v~~~d~~~~~   36 (365)
T 2z04_A            2 LTVGILGGGQLGWMTILEGRKLGFKFHVLEDKENA   36 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSSSC
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             99999899999999999999769989999779949


No 386
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.29  E-value=0.22  Score=25.42  Aligned_cols=37  Identities=19%  Similarity=0.194  Sum_probs=29.9

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCE--EEEEECCCCC
Q ss_conf             677668987987999999999965990--8998358883
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFN--PIIVERGKEV  142 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~--V~VlErg~~v  142 (549)
                      ..++|.|||+|.=|-.-|..|+++|++  |++++|.+..
T Consensus        32 ~m~kI~iIG~G~MG~~ia~~L~~aG~~v~V~~~dr~~~~   70 (314)
T 3ggo_A           32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPES   70 (314)
T ss_dssp             SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHCCCCCEEEEECCCHHH
T ss_conf             778899992389999999999977998389996599999


No 387
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=91.21  E-value=0.26  Score=24.97  Aligned_cols=37  Identities=22%  Similarity=0.162  Sum_probs=31.9

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6776689879-879999999999659908998358883
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ..+||+|+|| |.-|-..+-.|.++|++|+++.|....
T Consensus         3 ~M~KILVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~   40 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTP   40 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             98789997998289999999999689938999889865


No 388
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reductase family; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus HB8}
Probab=91.19  E-value=0.21  Score=25.52  Aligned_cols=37  Identities=14%  Similarity=0.246  Sum_probs=28.7

Q ss_pred             CCCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             76776689879-87999999999965990899835888
Q T0604           105 NLTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       105 ~~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .|++.|+|.|| +--|...|..|++.|++|++..|...
T Consensus         3 ~mk~~VlVTGas~GIG~aia~~la~~G~~V~~~~r~~~   40 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEK   40 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             99988999788888999999999987999999989999


No 389
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenase; HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.15  E-value=0.26  Score=24.99  Aligned_cols=35  Identities=17%  Similarity=0.337  Sum_probs=29.7

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCC
Q ss_conf             7766898798799999999996599--0899835888
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~  141 (549)
                      .++|.|||+|--|-.+|+.|+..+.  +++|++....
T Consensus         1 ~rKI~IiGaG~VG~~~A~~l~~~~l~~el~L~Di~~~   37 (309)
T 1hyh_A            1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEA   37 (309)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             9879998979899999999983699883999758997


No 390
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein; 1.55A {Shewanella oneidensis mr-1}
Probab=90.98  E-value=0.26  Score=24.97  Aligned_cols=30  Identities=17%  Similarity=0.378  Sum_probs=15.8

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEE
Q ss_conf             677668987987999999999965990899
Q T0604           106 LTERPIVIGFGPCGLFAGLVLAQMGFNPII  135 (549)
Q Consensus       106 ~~~rVVVVGaGpAGL~AAl~La~~G~~V~V  135 (549)
                      ...+|+|.|+|+.|++|+..+...|+.+++
T Consensus       142 ~g~~VlI~Gag~vG~~a~~lak~~G~~v~~  171 (315)
T 3goh_A          142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDL  171 (315)
T ss_dssp             SCCEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHCCCEEEE
T ss_conf             652488845624241769999987990999


No 391
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.92  E-value=0.23  Score=25.25  Aligned_cols=34  Identities=24%  Similarity=0.219  Sum_probs=31.2

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6689879879999999999659908998358883
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      +|-|||-|.-|.-.|..|+++|++|++++|.+..
T Consensus         2 ~Ig~IGlG~MG~~ma~~L~~~G~~v~v~dr~~~~   35 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDA   35 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHH
T ss_pred             CEEEEEHHHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             1999827898899999999689969999499999


No 392
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=90.76  E-value=0.47  Score=23.31  Aligned_cols=38  Identities=16%  Similarity=0.291  Sum_probs=27.6

Q ss_pred             CCCCCCEEEECCC--HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7767766898798--7999999999965990899835888
Q T0604           104 ENLTERPIVIGFG--PCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       104 ~~~~~rVVVVGaG--pAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+++.||+||=+|  --|...|..|++.|++|++..|...
T Consensus        12 ~rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~   51 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADD   51 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             7779988999388878999999999987998999979889


No 393
>1vi2_A Shikimate 5-dehydrogenase 2; structural genomics, oxidoreductase; HET: MSE NAD; 2.10A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 PDB: 1npd_A* 1o9b_A*
Probab=90.72  E-value=0.56  Score=22.87  Aligned_cols=31  Identities=19%  Similarity=0.252  Sum_probs=15.1

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCE-EEEEEC
Q ss_conf             7668987987999999999965990-899835
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFN-PIIVER  138 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~-V~VlEr  138 (549)
                      ++|+|+|+|-|+-.+++.|+..|.+ +.|+.|
T Consensus       127 k~vlilGaGGaa~Ai~~al~~~g~~~i~i~nR  158 (300)
T 1vi2_A          127 KTMVLLGAGGASTAIGAQGAIEGLKEIKLFNR  158 (300)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred             CEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf             86688535552047889987517653311368


No 394
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, gluconate utilization, pentose shunt; HET: GLO; 1.50A {Escherichia coli k-12} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.69  E-value=0.27  Score=24.82  Aligned_cols=129  Identities=16%  Similarity=0.079  Sum_probs=63.1

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             76776689879879999999999659908998358883211010001243542360234554135565212404553220
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK  184 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~~~~~~~~~n~~~g~ggag~fsdgkl~t~~~  184 (549)
                      -.++||-+||-|.=|.--|..|+++|++|.+++|.+..-.....-.  ...+.....+...+-.....  .| .+.+...
T Consensus        13 ~~K~kIG~IGLG~MG~~mA~nL~~~G~~V~vydr~~~k~~~l~~~g--~~~~~~~~~s~~e~v~~~~~--~~-vIi~~vp   87 (480)
T 2zyd_A           13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAEN--PGKKLVPYYTVKEFVESLET--PR-RILLMVK   87 (480)
T ss_dssp             --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHS--TTSCEEECSSHHHHHHTBCS--SC-EEEECSC
T ss_pred             CCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHC--CCCCCCHHCCHHHHHHHCCC--CC-EEEEECC
T ss_conf             5788699974079899999999967990699929999999999818--98777522349999974799--99-8999799


Q ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf             0021178999999966895100136764100012799999999999966988998134332
Q T0604           185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDD  245 (549)
Q Consensus       185 ~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~  245 (549)
                      +. ..++.+++.+.....+..+..+     .+...+.....+.+.+.+.|+.+. +..|..
T Consensus        88 ~~-~~v~~v~~~l~~~l~~g~iiID-----~sT~~~~~s~~~a~~l~~~gi~~l-dapVSG  141 (480)
T 2zyd_A           88 AG-AGTDAAIDSLKPYLDKGDIIID-----GGNTFFQDTIRRNRELSAEGFNFI-GTGVSG  141 (480)
T ss_dssp             SS-SHHHHHHHHHGGGCCTTCEEEE-----CSCCCHHHHHHHHHHHHHTTCEEE-EEEEES
T ss_pred             CC-HHHHHHHHHHHHCCCCCCEEEE-----CCCCCHHHHHHHHHHHHHCCCCEE-CCCCCC
T ss_conf             97-6899999999840889988984-----797626999999999996699344-440466


No 395
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A*
Probab=90.59  E-value=0.31  Score=24.51  Aligned_cols=32  Identities=16%  Similarity=0.266  Sum_probs=28.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEEC
Q ss_conf             7766898798799999999996599-0899835
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVER  138 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlEr  138 (549)
                      ..+|+|||.|.-|...|..|++.|+ +++|++.
T Consensus        36 ~s~VliiG~gglG~eiak~L~l~Gv~~i~i~D~   68 (346)
T 1y8q_A           36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDH   68 (346)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             597999877889999999999957987999949


No 396
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating 1; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.58  E-value=0.43  Score=23.59  Aligned_cols=131  Identities=14%  Similarity=0.017  Sum_probs=65.7

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             8776776689879879999999999659908998358883211010001243--54236023455413556521240455
Q T0604           103 PENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWR--KRTLNPESNVQFGEGGAGTFSDGKLY  180 (549)
Q Consensus       103 ~~~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~r~~~~~~~~~--~~~~~~~~n~~~g~ggag~fsdgkl~  180 (549)
                      .+.|...|-+||-|.-|.--|..|+++|++|.+++|.++.-.....-.....  .+....+.....-   ..  ++ .+.
T Consensus         6 ~~~Ms~~IGfIGLG~MG~~mA~nL~~~G~~V~vydrt~~k~~~l~~~~a~~~~~~~a~s~~d~v~~l---~~--~d-~Ii   79 (497)
T 2p4q_A            6 HHHMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKL---KR--PR-KVM   79 (497)
T ss_dssp             ---CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTS---CS--SC-EEE
T ss_pred             CHHHCCCEEEEEEHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH---CC--CC-EEE
T ss_conf             0001178789817487899999999789948999299999999997015445664657689999983---68--99-899


Q ss_pred             HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf             322000211789999999668951001367641000127999999999999669889981343320
Q T0604           181 SQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDL  246 (549)
Q Consensus       181 t~~~~~~~~~~~vl~~~~~~Ga~~~i~~~~kph~gtd~~~~vv~~L~~~l~~~G~~i~~~t~V~~i  246 (549)
                      +.+.+ ....+.|++.+.....+..+..+     .+...+.....+.+.+.+.|+.+ .+..|.+-
T Consensus        80 l~vp~-g~~v~~Vi~~l~~~l~~G~IiID-----~sTs~~~~s~~~~~~l~~kgi~f-lDapVSGG  138 (497)
T 2p4q_A           80 LLVKA-GAPVDALINQIVPLLEKGDIIID-----GGNSHFPDSNRRYEELKKKGILF-VGSGVSGG  138 (497)
T ss_dssp             ECCCS-SHHHHHHHHHHGGGCCTTCEEEE-----CSCCCHHHHHHHHHHHHHTTCEE-EEEEEESH
T ss_pred             EECCC-CHHHHHHHHHHHHHCCCCCEEEE-----CCCCCHHHHHHHHHHHHHCCCEE-ECCCCCCC
T ss_conf             97689-48999999999963889998997-----99997479999999998559858-54546788


No 397
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.50  E-value=0.37  Score=23.99  Aligned_cols=23  Identities=26%  Similarity=0.375  Sum_probs=11.4

Q ss_pred             CEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             56899318876799999996697
Q T0604           267 RHVVLAVGHSARDTFEMLHERGV  289 (549)
Q Consensus       267 d~VVlAtGhsard~~~~l~~~Gi  289 (549)
                      ..+|+..|+.||....-|.+.|.
T Consensus       143 ~vlIlGaGGaarai~~aL~~~g~  165 (297)
T 2egg_A          143 RILVIGAGGGARGIYFSLLSTAA  165 (297)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC
T ss_conf             69997663668999999997398


No 398
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) precursor; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=90.50  E-value=0.3  Score=24.54  Aligned_cols=34  Identities=18%  Similarity=0.204  Sum_probs=27.2

Q ss_pred             CCCEEEECCC---HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             7766898798---799999999996599089983588
Q T0604           107 TERPIVIGFG---PCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGaG---pAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .|.++|.||+   --|...|..|++.|++|++..|..
T Consensus         8 gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~   44 (297)
T 1d7o_A            8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             9979998999996499999999998799899983762


No 399
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant defense, biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.41  E-value=0.49  Score=23.22  Aligned_cols=11  Identities=9%  Similarity=-0.019  Sum_probs=5.3

Q ss_pred             CCCEEEECCCH
Q ss_conf             77668987987
Q T0604           107 TERPIVIGFGP  117 (549)
Q Consensus       107 ~~rVVVVGaGp  117 (549)
                      .-.|+=||.+.
T Consensus        79 ~G~Vv~vG~~v   89 (366)
T 1yqd_A           79 VGEVTEVGSKV   89 (366)
T ss_dssp             EEEEEEECTTC
T ss_pred             EEEEEEECCCC
T ss_conf             99999989987


No 400
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.31  E-value=0.31  Score=24.43  Aligned_cols=36  Identities=14%  Similarity=0.176  Sum_probs=32.0

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .-+|-|||-|.-|.-.|..|++.|++|.++++.+..
T Consensus         7 ~mkIg~IGlG~MG~~mA~~L~~~G~~v~v~d~~~~~   42 (303)
T 3g0o_A            7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQA   42 (303)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCEEEEEEEHHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             785999953798999999999789938998199999


No 401
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.23  E-value=0.21  Score=25.54  Aligned_cols=35  Identities=17%  Similarity=0.145  Sum_probs=31.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             76689879879999999999659908998358883
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      -||-|||-|.-|.-.|..|++.|++|.+++|.+..
T Consensus         5 mkIgviGlG~MG~~~a~~L~~~G~~v~v~dr~~~~   39 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEAN   39 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf             98999702687999999999788948997899999


No 402
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, protein structure initiative; 2.85A {Plasmodium falciparum 3D7}
Probab=90.18  E-value=0.3  Score=24.60  Aligned_cols=35  Identities=14%  Similarity=0.039  Sum_probs=30.3

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCC-------CEEEEEECCCCC
Q ss_conf             76689879879999999999659-------908998358883
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMG-------FNPIIVERGKEV  142 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G-------~~V~VlErg~~v  142 (549)
                      .||.|||+|.-|...|..|++.|       .+|.++-|.+.+
T Consensus        22 mKI~IIGaGawGtALA~~La~ng~~~~~~~~~V~lw~r~~~v   63 (375)
T 1yj8_A           22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFV   63 (375)
T ss_dssp             BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC-
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC
T ss_conf             889998979999999999997087655568757999706540


No 403
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.07  E-value=0.23  Score=25.24  Aligned_cols=37  Identities=8%  Similarity=0.126  Sum_probs=30.5

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCC-------CEEEEEECCCCCC
Q ss_conf             776689879879999999999659-------9089983588832
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMG-------FNPIIVERGKEVR  143 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G-------~~V~VlErg~~vg  143 (549)
                      .+||.|+|||.-|...|..|++.|       .+|.++-|.+++.
T Consensus         8 ~kKI~ViGaGawGtALA~~La~N~~~~~~~~~~V~lw~r~~~~~   51 (354)
T 1x0v_A            8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIG   51 (354)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCHHCCCCEEEEEEECHHHH
T ss_conf             78389989499999999999853640101687468996154432


No 404
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=90.02  E-value=0.7  Score=22.27  Aligned_cols=36  Identities=19%  Similarity=0.225  Sum_probs=32.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879879999999999659908998358883
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ..+|-+||-|.-|.--|..|+++|++|.+++|.+..
T Consensus        21 mmkIG~IGlG~MG~~mA~~L~~~G~~v~v~d~~~~~   56 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSK   56 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             CCEEEEECHHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf             687988707889999999999789938997599999


No 405
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=89.96  E-value=0.53  Score=23.01  Aligned_cols=32  Identities=25%  Similarity=0.323  Sum_probs=26.0

Q ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             689879-87999999999965990899835888
Q T0604           110 PIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       110 VVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |+|.|| +--|...|..|++.|++|++..|...
T Consensus         4 vlITGas~GIG~aiA~~la~~Ga~Vv~~~r~~~   36 (255)
T 2dkn_A            4 IAITGSASGIGAALKELLARAGHTVIGIDRGQA   36 (255)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             999388479999999999987998999979889


No 406
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.95  E-value=0.45  Score=23.46  Aligned_cols=33  Identities=21%  Similarity=0.335  Sum_probs=29.3

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCC
Q ss_conf             66898798799999999996599--0899835888
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKE  141 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~  141 (549)
                      ||.|||+|--|..+|+.|+..|+  +.+|++....
T Consensus         2 KV~IiGaG~vG~~~a~~l~~~~l~~el~L~D~~~~   36 (310)
T 1guz_A            2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG   36 (310)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCC
T ss_conf             79999969899999999985799985599568987


No 407
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens}
Probab=89.94  E-value=0.35  Score=24.14  Aligned_cols=11  Identities=18%  Similarity=0.350  Sum_probs=8.3

Q ss_pred             EECEEEEECCC
Q ss_conf             70568993188
Q T0604           265 KSRHVVLAVGH  275 (549)
Q Consensus       265 ~ad~VVlAtGh  275 (549)
                      .+|.+|-|||.
T Consensus       275 ~aDifiTaTGn  285 (435)
T 3gvp_A          275 QVDIVITCTGN  285 (435)
T ss_dssp             TCSEEEECSSC
T ss_pred             HCCEEEEECCC
T ss_conf             37899994488


No 408
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.93  E-value=0.38  Score=23.91  Aligned_cols=35  Identities=17%  Similarity=0.242  Sum_probs=29.7

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             776689879-87999999999965990899835888
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .++|+|.|| +--|...|..|++.|++|+++.|...
T Consensus         3 ~~kvlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~   38 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN   38 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             598999858769999999999987999999979820


No 409
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=89.92  E-value=0.47  Score=23.37  Aligned_cols=35  Identities=23%  Similarity=0.303  Sum_probs=27.1

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             6776689879-8799999999996599089983588
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      |+|.++|.|| |--|...|..|++.|++|+++.|..
T Consensus         1 m~K~alITGas~GIG~aia~~l~~~G~~Vil~~r~~   36 (256)
T 1geg_A            1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYND   36 (256)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             998999947850999999999998799899998989


No 410
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, human, structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.91  E-value=0.66  Score=22.42  Aligned_cols=38  Identities=16%  Similarity=0.256  Sum_probs=27.9

Q ss_pred             CCCCCCEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7767766898-79-87999999999965990899835888
Q T0604           104 ENLTERPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       104 ~~~~~rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .++.-||++| || +--|...|..|++.|++|++..|..+
T Consensus        27 ~~L~GKvalITGas~GIG~aiA~~la~~Ga~Vvl~~r~~~   66 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKH   66 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             9999988999287669999999999987998999989999


No 411
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=89.90  E-value=0.52  Score=23.06  Aligned_cols=36  Identities=28%  Similarity=0.248  Sum_probs=26.5

Q ss_pred             CCCCEE-EECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668-9879-87999999999965990899835888
Q T0604           106 LTERPI-VIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVV-VVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ++-||+ |.|| +--|...|..|++.|++|++..|..+
T Consensus        27 L~gKvalITGas~GIG~aiA~~la~~Ga~V~i~~r~~~   64 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE   64 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             99998999288888999999999986999999979889


No 412
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=89.84  E-value=0.52  Score=23.09  Aligned_cols=35  Identities=29%  Similarity=0.274  Sum_probs=28.2

Q ss_pred             CCCEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7766898798-7999999999965990899835888
Q T0604           107 TERPIVIGFG-PCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaG-pAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ++.|+|.||+ --|...|..|++.|++|++..|...
T Consensus         7 ~k~vlITGas~GIG~aiA~~la~~Ga~V~i~~r~~~   42 (252)
T 3h7a_A            7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGE   42 (252)
T ss_dssp             SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             999999758369999999999987999999989999


No 413
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum 3D7} SCOP: c.2.1.4 c.23.12.3
Probab=89.79  E-value=0.32  Score=24.38  Aligned_cols=23  Identities=17%  Similarity=0.301  Sum_probs=12.0

Q ss_pred             CCCCEEECCHHHHCHHHHHHHHHH-HHHHC
Q ss_conf             057604526254031899999999-98861
Q T0604           442 FTPGIKLTDLSKALPPFAVEAIRE-AIPAF  470 (549)
Q Consensus       442 ~~~~~~~~~L~~~lP~~v~~~l~~-~l~~f  470 (549)
                      |.+++++      +|+++-+.+.+ .|..|
T Consensus       426 l~~~V~~------lP~~iDe~VA~l~L~~~  449 (479)
T 1v8b_A          426 YENKVYL------LPKHLDEKVALYHLKKL  449 (479)
T ss_dssp             CCSSEEC------CCHHHHHHHHHHHHGGG
T ss_pred             CCCCEEE------CCHHHHHHHHHHHHHHC
T ss_conf             5897478------98899999999989765


No 414
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=89.67  E-value=0.59  Score=22.72  Aligned_cols=37  Identities=24%  Similarity=0.160  Sum_probs=31.9

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6776689879-879999999999659908998358883
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ..+||+|.|| |.-|-..+..|.++|++|.++.|....
T Consensus         8 ~~KkILVTGgtGfIGs~lv~~Ll~~g~~V~~~~r~~~~   45 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPT   45 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             95989996899789999999999779989999789986


No 415
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=89.58  E-value=0.35  Score=24.17  Aligned_cols=35  Identities=9%  Similarity=0.048  Sum_probs=28.6

Q ss_pred             CCCCEEEEC-CCHHHHHHHHHHHHCCCE--EEEEECCC
Q ss_conf             677668987-987999999999965990--89983588
Q T0604           106 LTERPIVIG-FGPCGLFAGLVLAQMGFN--PIIVERGK  140 (549)
Q Consensus       106 ~~~rVVVVG-aGpAGL~AAl~La~~G~~--V~VlErg~  140 (549)
                      +.-||.||| +|.-|-.+|+.|+..++-  ..|+|..+
T Consensus         7 ~~mKV~IiGaaG~VG~~~A~~l~~~~l~~el~LiDi~~   44 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN   44 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             99869999799769999999997189978799962899


No 416
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.54  E-value=0.24  Score=25.17  Aligned_cols=28  Identities=14%  Similarity=0.049  Sum_probs=10.0

Q ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEE
Q ss_conf             6689879-879999999999659908998
Q T0604           109 RPIVIGF-GPCGLFAGLVLAQMGFNPIIV  136 (549)
Q Consensus       109 rVVVVGa-GpAGL~AAl~La~~G~~V~Vl  136 (549)
                      +|+|.|| |+-|++++..+...|.+|+++
T Consensus       148 ~VlV~ga~G~vG~~a~qla~~~G~~vi~~  176 (333)
T 1wly_A          148 YVLIHAAAGGMGHIMVPWARHLGATVIGT  176 (333)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             99998996699999999998759989997


No 417
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A
Probab=89.53  E-value=0.27  Score=24.82  Aligned_cols=35  Identities=17%  Similarity=0.229  Sum_probs=31.8

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             76689879879999999999659908998358883
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ++|-+||-|.=|.-.|..|+++|++|.+++|.+.-
T Consensus         4 ~kIg~IGlG~MG~~ma~~L~~~G~~v~v~dr~~~~   38 (302)
T 2h78_A            4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSA   38 (302)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf             88999826588999999999789968998199899


No 418
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A
Probab=89.41  E-value=0.38  Score=23.92  Aligned_cols=32  Identities=16%  Similarity=0.067  Sum_probs=28.0

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCE-EEEEEC
Q ss_conf             77668987987999999999965990-899835
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFN-PIIVER  138 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~-V~VlEr  138 (549)
                      ..+|+|||+|..|..+|-.|+..|+. ++|++.
T Consensus        32 ~s~VlivG~gglG~eiaknL~l~GVg~itivD~   64 (531)
T 1tt5_A           32 SAHVCLINATATGTEILKNLVLPGIGSFTIIDG   64 (531)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             698899888899999999999835988999879


No 419
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=89.29  E-value=0.54  Score=22.96  Aligned_cols=36  Identities=25%  Similarity=0.209  Sum_probs=27.9

Q ss_pred             CCCEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             77668987-9879999999999659908998358883
Q T0604           107 TERPIVIG-FGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVG-aGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .|.|+|.| ++-=|...|..|++.|++|++..|...-
T Consensus        14 ~K~~lITGas~GIG~aiA~~la~~Ga~Vi~~~r~~~~   50 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAAD   50 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             9989993888199999999999879989999897788


No 420
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide complex; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.29  E-value=0.52  Score=23.07  Aligned_cols=37  Identities=16%  Similarity=0.156  Sum_probs=30.9

Q ss_pred             CCCCCCCEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             877677668987-9879999999999659908998358
Q T0604           103 PENLTERPIVIG-FGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       103 ~~~~~~rVVVVG-aGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      |+...-||+|.| +|.-|-..+..|.++|++|+++++-
T Consensus        16 ~~g~~MKILVtGgtGfIGs~lv~~Ll~~g~~V~~vd~~   53 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNF   53 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             89999869998887789999999999786989999788


No 421
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A*
Probab=89.24  E-value=0.38  Score=23.91  Aligned_cols=37  Identities=11%  Similarity=0.162  Sum_probs=27.2

Q ss_pred             CCCEEEECCCH---HHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             77668987987---99999999996599089983588832
Q T0604           107 TERPIVIGFGP---CGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       107 ~~rVVVVGaGp---AGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      .|.++|.||+-   -|..+|..|++.|++|++..|.+...
T Consensus         9 gK~~lITGass~~GIG~aia~~la~~Ga~V~i~~r~~~~~   48 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK   48 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf             9979998999850189999999998699999995887899


No 422
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A*
Probab=89.21  E-value=0.38  Score=23.91  Aligned_cols=36  Identities=19%  Similarity=0.158  Sum_probs=29.8

Q ss_pred             CCCCEEEECCCHH---------HHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             6776689879879---------99999999965990899835888
Q T0604           106 LTERPIVIGFGPC---------GLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGaGpA---------GL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |.+||.|+.||++         |-..+-.|.+.|++|+++|....
T Consensus         1 m~~ki~vl~GG~S~E~~iSl~sg~~i~~aL~~~g~~~~~id~~~~   45 (306)
T 1iow_A            1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEV   45 (306)
T ss_dssp             CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             985099993868742284999999999999886997999889841


No 423
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=89.20  E-value=0.57  Score=22.81  Aligned_cols=36  Identities=25%  Similarity=0.198  Sum_probs=31.8

Q ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             76689879-8799999999996599089983588832
Q T0604           108 ERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       108 ~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      .||+|.|| |.-|-..+..|.++|++|+.+.|.....
T Consensus         2 ~rILVtGgtGfIG~~l~~~L~~~g~~V~~~~r~~~~~   38 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPER   38 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC---
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf             8699989986899999999997849899998789731


No 424
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=89.15  E-value=0.81  Score=21.88  Aligned_cols=39  Identities=23%  Similarity=0.187  Sum_probs=27.7

Q ss_pred             CCCCCCCEEEECC--CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             8776776689879--87999999999965990899835888
Q T0604           103 PENLTERPIVIGF--GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       103 ~~~~~~rVVVVGa--GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |..+.-||+||=+  +--|...|..|++.|++|++..|..+
T Consensus        13 ~g~L~GKvalVTGgs~GIG~aiA~~la~~Ga~Vvi~~r~~~   53 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE   53 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             99779898999388878999999999987998999979889


No 425
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.05  E-value=0.44  Score=23.52  Aligned_cols=32  Identities=22%  Similarity=0.485  Sum_probs=28.2

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             66898798799999999996599--089983588
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      ||.|||+|.-|..+|+.|+..++  +..|++..+
T Consensus         2 KV~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~~   35 (319)
T 1a5z_A            2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK   35 (319)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             7999996989999999998479987699983898


No 426
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.03  E-value=0.51  Score=23.15  Aligned_cols=24  Identities=21%  Similarity=0.326  Sum_probs=14.3

Q ss_pred             EEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             899318876799999996697111
Q T0604           269 VVLAVGHSARDTFEMLHERGVYME  292 (549)
Q Consensus       269 VVlAtGhsard~~~~l~~~Gi~~~  292 (549)
                      +|--.|.-++..-+.|.+.|..+.
T Consensus       177 aIQGfGnVG~~~A~~L~~~Gakvv  200 (364)
T 1leh_A          177 SVQGLGNVAKALCKKLNTEGAKLV  200 (364)
T ss_dssp             EEECCSHHHHHHHHHHHHTTCEEE
T ss_pred             EEEECCHHHHHHHHHHHHCCCEEE
T ss_conf             999266478999999998799999


No 427
>2v7p_A L-lactate dehydrogenase; oxidoreductase, phosphorylation, NAD, cytoplasm, glycolysis, thermophIle; HET: NAD; 2.10A {Thermus thermophilus} PDB: 2e37_A* 2v6m_A*
Probab=89.00  E-value=0.52  Score=23.09  Aligned_cols=32  Identities=22%  Similarity=0.418  Sum_probs=28.5

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             66898798799999999996599--089983588
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      ||.|||+|--|-.+|+.|+..++  ++.|++...
T Consensus         2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~   35 (310)
T 2v7p_A            2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDR   35 (310)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             7999996989999999998569988799991799


No 428
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=88.93  E-value=0.55  Score=22.93  Aligned_cols=36  Identities=17%  Similarity=0.132  Sum_probs=26.7

Q ss_pred             CCCCEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             67766898-79-87999999999965990899835888
Q T0604           106 LTERPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      +..||+|| || +--|+..|..|++.|++|++..|...
T Consensus        42 lenKvalITGas~GIG~aiA~~la~~Ga~Vvi~~r~~~   79 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQK   79 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             89988999088858999999999986999999979999


No 429
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.92  E-value=0.53  Score=23.04  Aligned_cols=32  Identities=28%  Similarity=0.403  Sum_probs=28.6

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             66898798799999999996599--089983588
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      ||.|||+|--|-..|+.|+..+.  ++.|++...
T Consensus         2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~   35 (304)
T 2v6b_A            2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE   35 (304)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             7999996989999999998479988699984899


No 430
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus VF5} SCOP: a.100.1.12 c.2.1.6
Probab=88.89  E-value=0.45  Score=23.45  Aligned_cols=36  Identities=19%  Similarity=0.202  Sum_probs=30.1

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCC
Q ss_conf             766898798799999999996599--089983588832
Q T0604           108 ERPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGKEVR  143 (549)
Q Consensus       108 ~rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~~vg  143 (549)
                      ++|.|||.|.=|-+-|..|.+.|+  +|..+++.+...
T Consensus         2 k~I~IiGlG~mG~sla~~l~~~g~~~~V~g~D~~~~~~   39 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESI   39 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCHHHH
T ss_conf             77999911889999999997159982899998999999


No 431
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.86  E-value=0.75  Score=22.06  Aligned_cols=30  Identities=37%  Similarity=0.713  Sum_probs=16.4

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf             776689879879999999999659908998
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIV  136 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~Vl  136 (549)
                      ..+|+|+|+|..|+++...+...|.++++.
T Consensus       165 g~~VlI~GaG~vG~~a~q~a~~~g~~~V~~  194 (343)
T 2dq4_A          165 GKSVLITGAGPIGLMAAMVVRASGAGPILV  194 (343)
T ss_dssp             TSCEEEECCSHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCEEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf             699999956851179999999739937964


No 432
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=88.81  E-value=0.19  Score=25.81  Aligned_cols=34  Identities=18%  Similarity=-0.028  Sum_probs=22.9

Q ss_pred             CCCCCCCCCEEECCCCCHHHH--HHHHHHHHHHHHHHH
Q ss_conf             430268985420123533578--999999999999999
Q T0604           503 FQSVNLKGFYPAGEGAGYAGG--ILSAGIDGIKVAEAV  538 (549)
Q Consensus       503 leS~~i~GLY~~GEgaGyagG--I~saa~~G~~~a~~i  538 (549)
                      |+ ...+.+|.+|.... ++.  +..|--+|.++|..|
T Consensus       636 L~-~~~~~v~~iGD~~~-~~~~~a~~Ai~eG~~aA~~I  671 (671)
T 1ps9_A          636 LI-DSGKTVHLIGGCDV-AMELDARRAIAQGTRLALEI  671 (671)
T ss_dssp             HH-TTTCCEEECGGGTC-CSSCCHHHHHHHHHHHHHHC
T ss_pred             HH-HCCCCEEEECCCCC-CCCHHHHHHHHHHHHHHHHC
T ss_conf             99-75998999868787-68634999999999999849


No 433
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, PSI, protein structure initiative; 2.40A {Salmonella typhimurium LT2}
Probab=88.81  E-value=0.29  Score=24.63  Aligned_cols=34  Identities=24%  Similarity=0.271  Sum_probs=31.4

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6689879879999999999659908998358883
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      ||-|||-|.-|.-.|..|++.|++|++++|.+..
T Consensus         5 kIg~iGlG~MG~~~a~~L~~~G~~v~v~d~~~~~   38 (295)
T 1yb4_A            5 KLGFIGLGIMGSPMAINLARAGHQLHVTTIGPVA   38 (295)
T ss_dssp             EEEECCCSTTHHHHHHHHHHTTCEEEECCSSCCC
T ss_pred             EEEEEEHHHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             8998716988999999999779928998088989


No 434
>2jjy_A Enoyl-[acyl-carrier-protein] reductase; NAD, FABI, oxidoreductase, enoyl reductase, fatty acid biosynthesis; HET: NAD; 2.90A {Francisella tularensis}
Probab=88.77  E-value=0.49  Score=23.25  Aligned_cols=35  Identities=9%  Similarity=0.106  Sum_probs=27.1

Q ss_pred             CCCEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             776689879-8--7999999999965990899835888
Q T0604           107 TERPIVIGF-G--PCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGa-G--pAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .++++|.|+ |  --|..+|..|++.|++|++..+++.
T Consensus         6 gk~alITG~aas~GIG~aiA~~la~~G~~Vvi~~~~~~   43 (268)
T 2jjy_A            6 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF   43 (268)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf             98899989988848999999999986999999858951


No 435
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2, protein structure initiative; 2.19A {Streptomyces coelicolor}
Probab=88.76  E-value=0.62  Score=22.58  Aligned_cols=20  Identities=35%  Similarity=0.424  Sum_probs=6.5

Q ss_pred             CHHHHHHHHHHHHCCCEEEE
Q ss_conf             87999999999965990899
Q T0604           116 GPCGLFAGLVLAQMGFNPII  135 (549)
Q Consensus       116 GpAGL~AAl~La~~G~~V~V  135 (549)
                      |+.|+++...+...|.+|++
T Consensus       239 G~vGl~aiqlak~~G~~vi~  258 (456)
T 3krt_A          239 GGLGSYATQFALAGGANPIC  258 (456)
T ss_dssp             SHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCCHHHHHHHHHCCCEEEE
T ss_conf             72147999999975990579


No 436
>2qio_A Enoyl-(acyl-carrier-protein) reductase; enoyl ACP reductase, unknown function; HET: NAD TCL; 2.44A {Bacillus anthracis}
Probab=88.72  E-value=0.57  Score=22.80  Aligned_cols=36  Identities=17%  Similarity=0.190  Sum_probs=28.5

Q ss_pred             CCCEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879-8--79999999999659908998358883
Q T0604           107 TERPIVIGF-G--PCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGa-G--pAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .+.++|.|| |  --|..+|..|++.|++|++..+....
T Consensus         6 gK~~lITGas~~~GIG~aiA~~l~~~Ga~Vii~~~~~~~   44 (256)
T 2qio_A            6 GKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERL   44 (256)
T ss_dssp             TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             898999899998669999999999879999998288078


No 437
>2nlo_A Shikimate dehydrogenase; quinate, rossman fold, oxidoreductase; 1.64A {Corynebacterium glutamicum atcc 13032}
Probab=88.69  E-value=0.62  Score=22.59  Aligned_cols=23  Identities=22%  Similarity=0.199  Sum_probs=15.1

Q ss_pred             CEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             56899318876799999996697
Q T0604           267 RHVVLAVGHSARDTFEMLHERGV  289 (549)
Q Consensus       267 d~VVlAtGhsard~~~~l~~~Gi  289 (549)
                      ..+|+..|+.||-...-|.+.|.
T Consensus       148 ~vlilGaGGaara~~~al~~~g~  170 (302)
T 2nlo_A          148 SVVQVGAGGVGNAVAYALVTHGV  170 (302)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC
T ss_conf             47996565088899999997498


No 438
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=88.68  E-value=0.68  Score=22.33  Aligned_cols=36  Identities=19%  Similarity=0.183  Sum_probs=27.0

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             6776689879-87999999999965990899835888
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |+|-++|.|| +--|...|..|++.|++|++..|..+
T Consensus         1 MnKvalITGas~GIG~aiA~~la~~G~~V~i~~~~~~   37 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAE   37 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             9989999288978999999999987998999989889


No 439
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix K1}
Probab=88.58  E-value=0.56  Score=22.89  Aligned_cols=35  Identities=23%  Similarity=0.306  Sum_probs=28.0

Q ss_pred             CCCEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7766898798-7999999999965990899835888
Q T0604           107 TERPIVIGFG-PCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaG-pAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .|.|+|.||. --|..+|..|++.|++|++..|..+
T Consensus         7 GK~vlITGas~GIG~~ia~~l~~~Ga~Vi~~~r~~~   42 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNRE   42 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             998999288878999999999987998999979889


No 440
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B}
Probab=88.56  E-value=0.41  Score=23.74  Aligned_cols=37  Identities=11%  Similarity=0.126  Sum_probs=28.7

Q ss_pred             CCCEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             776689879-8--799999999996599089983588832
Q T0604           107 TERPIVIGF-G--PCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       107 ~~rVVVVGa-G--pAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      .|+++|.|| |  --|...|..|++.|++|++..|.+...
T Consensus        14 gK~~lITGaa~s~GIG~aiA~~la~~G~~V~i~~~~~~~~   53 (271)
T 3ek2_A           14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK   53 (271)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf             9989998998760899999999998699999995886889


No 441
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier- protein) reductase, NAD; HET: NAD; 1.80A {Anaplasma phagocytophilum HZ} PDB: 3k2e_A*
Probab=88.55  E-value=0.47  Score=23.32  Aligned_cols=36  Identities=8%  Similarity=0.123  Sum_probs=28.4

Q ss_pred             CCCEEEECCC---HHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             7766898798---79999999999659908998358883
Q T0604           107 TERPIVIGFG---PCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGaG---pAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .|.++|.||+   --|...|..|++.|.+|++..|.+..
T Consensus        30 GK~alITGaas~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   68 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETF   68 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             998999899998669999999999869999999688899


No 442
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=88.53  E-value=0.81  Score=21.84  Aligned_cols=36  Identities=22%  Similarity=0.155  Sum_probs=27.0

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879-879999999999659908998358883
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .|.++|.|| +--|..+|..|++.|++|++..|..+.
T Consensus        34 GK~~lITGas~GIG~aia~~la~~G~~V~l~~r~~~~   70 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPA   70 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             9879993898699999999999879989999588578


No 443
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.51  E-value=0.44  Score=23.53  Aligned_cols=33  Identities=18%  Similarity=0.249  Sum_probs=28.1

Q ss_pred             CCEEEECC-CHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             76689879-8799999999996599--089983588
Q T0604           108 ERPIVIGF-GPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       108 ~rVVVVGa-GpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      .||.|||| |.-|-.+|+.|+..++  +++|++..+
T Consensus         1 ~KV~IiGa~G~VG~~~A~~l~~~~l~~el~L~D~~~   36 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             969999999869999999997189877599995798


No 444
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=88.39  E-value=0.84  Score=21.77  Aligned_cols=34  Identities=12%  Similarity=0.100  Sum_probs=25.7

Q ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             76689879-87999999999965990899835888
Q T0604           108 ERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       108 ~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |.++|.|+ +--|...|..|++.|++|++..|...
T Consensus         6 K~alITG~s~GIG~aia~~la~~Ga~V~~~~r~~~   40 (245)
T 1uls_A            6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEG   40 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             99999388878999999999987998999979878


No 445
>1gu7_A 2,4-dienoyl-COA reductase; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=88.26  E-value=0.93  Score=21.49  Aligned_cols=10  Identities=10%  Similarity=0.235  Sum_probs=4.8

Q ss_pred             EECCCCEEEE
Q ss_conf             6167866887
Q T0604           344 CMCPGGTVVA  353 (549)
Q Consensus       344 cmcpgG~vv~  353 (549)
                      |+.++|.++.
T Consensus       264 ~l~~~G~iv~  273 (364)
T 1gu7_A          264 KLNNNGLMLT  273 (364)
T ss_dssp             TSCTTCEEEE
T ss_pred             HCCCCCEEEE
T ss_conf             3279978999


No 446
>1hwx_A GDH, glutamate dehydrogenase; allostery, abortive complex, oxidoreductase; HET: GLU GTP NAI; 2.50A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 1hwy_A* 1hwz_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr7_A 1nqt_A 1nr1_A
Probab=88.23  E-value=0.81  Score=21.85  Aligned_cols=21  Identities=19%  Similarity=0.294  Sum_probs=10.5

Q ss_pred             ECCCCHHHHHHHHHHCCCCCC
Q ss_conf             318876799999996697111
Q T0604           272 AVGHSARDTFEMLHERGVYME  292 (549)
Q Consensus       272 AtGhsard~~~~l~~~Gi~~~  292 (549)
                      -.|.-++...+.|.+.|..+.
T Consensus       251 GfGnVG~~aA~~L~~~Gakvv  271 (501)
T 1hwx_A          251 GFGNVGLHSMRYLHRFGAKCV  271 (501)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEE
T ss_conf             987155899977773574799


No 447
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE NDP; 1.70A {Ralstonia eutropha JMP134}
Probab=88.21  E-value=0.47  Score=23.32  Aligned_cols=19  Identities=37%  Similarity=0.555  Sum_probs=13.5

Q ss_pred             CCCEEEECCCHHHHHHHHH
Q ss_conf             7766898798799999999
Q T0604           107 TERPIVIGFGPCGLFAGLV  125 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~  125 (549)
                      ....+|.+.++.|......
T Consensus        67 ~~~~~v~~~~~~~~~~~~~   85 (379)
T 3iup_A           67 AERPIVTARVPEGAMRSMA   85 (379)
T ss_dssp             SSSEEEEEECCHHHHHHHG
T ss_pred             CCCCEEEEECCCCCEECCC
T ss_conf             7776375443764112137


No 448
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A
Probab=88.15  E-value=0.46  Score=23.42  Aligned_cols=21  Identities=24%  Similarity=0.208  Sum_probs=10.9

Q ss_pred             ECCCCHHHHHHHHHHCCCCCC
Q ss_conf             318876799999996697111
Q T0604           272 AVGHSARDTFEMLHERGVYME  292 (549)
Q Consensus       272 AtGhsard~~~~l~~~Gi~~~  292 (549)
                      -.|+-++...+.|.+.|.++.
T Consensus       237 GfGnVG~~aa~~L~~~Gakvv  257 (449)
T 1bgv_A          237 GFGNVAWGAAKKLAELGAKAV  257 (449)
T ss_dssp             CSSHHHHHHHHHHHHHTCEEE
T ss_pred             CCCCHHHHHHHHHHHCCCEEE
T ss_conf             778189999999985698789


No 449
>3ijr_A Oxidoreductase, short chain dehydrogenase/reductase family; structural genomics, infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.11  E-value=0.95  Score=21.43  Aligned_cols=40  Identities=23%  Similarity=0.266  Sum_probs=28.8

Q ss_pred             CCCCCC-CCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             887767-76689879-87999999999965990899835888
Q T0604           102 APENLT-ERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       102 ~~~~~~-~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      +++.++ |.|+|.|| +--|..+|..|+++|++|++..|...
T Consensus        41 ~~~~L~GK~alITGas~GIG~aiA~~la~~G~~Vil~~r~~~   82 (291)
T 3ijr_A           41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE   82 (291)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             887789998999378979999999999987998999978806


No 450
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.00  E-value=0.72  Score=22.20  Aligned_cols=14  Identities=14%  Similarity=-0.168  Sum_probs=7.4

Q ss_pred             CCCCEEEECCCHHH
Q ss_conf             67766898798799
Q T0604           106 LTERPIVIGFGPCG  119 (549)
Q Consensus       106 ~~~rVVVVGaGpAG  119 (549)
                      ..-+|+=||.+..+
T Consensus        67 ~~G~Vv~vGs~v~~   80 (371)
T 1f8f_A           67 GSGIIEAIGPNVTE   80 (371)
T ss_dssp             EEEEEEEECTTCCS
T ss_pred             EEEEEEEECCCCCC
T ss_conf             99999998999987


No 451
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=87.94  E-value=0.61  Score=22.62  Aligned_cols=18  Identities=11%  Similarity=0.062  Sum_probs=13.1

Q ss_pred             HHHHHHHHHHCCCHHHCC
Q ss_conf             999999998588878917
Q T0604            27 ALLDAITKKLGIPAEKVI   44 (549)
Q Consensus        27 ~l~~~~~~~l~~~~~~i~   44 (549)
                      ...+.+++.++++++...
T Consensus        12 ~~~~~a~~~~~~~~~~~~   29 (421)
T 1v9l_A           12 NYVKKGVELGGFPEDFYK   29 (421)
T ss_dssp             HHHHHHHHHTTCCHHHHH
T ss_pred             HHHHHHHHHCCCCHHHHH
T ss_conf             999999987398988999


No 452
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis}
Probab=87.84  E-value=0.68  Score=22.35  Aligned_cols=35  Identities=11%  Similarity=0.182  Sum_probs=27.4

Q ss_pred             CCCEEEECCC---HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7766898798---7999999999965990899835888
Q T0604           107 TERPIVIGFG---PCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaG---pAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .|+++|.||+   --|...|..|++.|++|++..|.+.
T Consensus        31 GK~alVTGass~~GIG~aiA~~la~~Ga~V~i~~r~~~   68 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA   68 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             99899989999955999999999986999999838779


No 453
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolidine carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis H37RV} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 2aqh_A* 2aqk_A* ...
Probab=87.80  E-value=0.64  Score=22.49  Aligned_cols=34  Identities=15%  Similarity=0.211  Sum_probs=27.0

Q ss_pred             CCCEEEECC-CH--HHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             776689879-87--99999999996599089983588
Q T0604           107 TERPIVIGF-GP--CGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGa-Gp--AGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .|+|+|.|| |-  -|...|..|++.|++|++..|..
T Consensus         7 gK~vlITGaags~GIG~aia~~la~~Ga~Vvl~~~~~   43 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR   43 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             8879997999997799999999998699999996882


No 454
>3i1j_A Oxidoreductase, short chain dehydrogenase/reductase family; dimer, mixed alpha-beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV}
Probab=87.79  E-value=0.99  Score=21.31  Aligned_cols=39  Identities=28%  Similarity=0.376  Sum_probs=27.8

Q ss_pred             CCCCCCCEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             87767766898-79-87999999999965990899835888
Q T0604           103 PENLTERPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       103 ~~~~~~rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      |..++-|+++| || +--|...|..|++.|++|++..|...
T Consensus         9 p~~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~   49 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEA   49 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             41359598999684759999999999987998999989889


No 455
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structural genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=87.73  E-value=0.67  Score=22.37  Aligned_cols=37  Identities=19%  Similarity=0.139  Sum_probs=27.4

Q ss_pred             CCCCCEEEECCCHH--HHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             76776689879879--99999999965990899835888
Q T0604           105 NLTERPIVIGFGPC--GLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       105 ~~~~rVVVVGaGpA--GL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ++.-||++|=+|-.  |...|..|++.|++|++..|..+
T Consensus         2 PL~GKvalITGas~GIG~aiA~~la~~Ga~V~i~~r~~~   40 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLD   40 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             999988999686878999999999987998999979889


No 456
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=87.73  E-value=0.97  Score=21.36  Aligned_cols=36  Identities=19%  Similarity=0.063  Sum_probs=26.7

Q ss_pred             CCCCEE-EECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             677668-9879-87999999999965990899835888
Q T0604           106 LTERPI-VIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVV-VVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ++-|++ |.|| +--|...|..|++.|++|++..|...
T Consensus         5 L~gK~alITGas~GIG~aiA~~la~~G~~V~~~~r~~~   42 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDE   42 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             59898999388878999999999987998999979889


No 457
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=87.67  E-value=0.66  Score=22.42  Aligned_cols=32  Identities=31%  Similarity=0.312  Sum_probs=27.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCC-EEEEEEC
Q ss_conf             7766898798799999999996599-0899835
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVER  138 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~-~V~VlEr  138 (549)
                      ..||+|||+|.-|...+-.|+..|+ +++|++.
T Consensus       411 ~~kVLvvG~gglG~Ei~knL~l~Gv~~i~i~D~  443 (805)
T 2nvu_B          411 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDM  443 (805)
T ss_dssp             TCCEEEECCSSHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEECCCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             494894387899999999999848985999819


No 458
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genomics, NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus VF5} PDB: 2z95_A*
Probab=87.66  E-value=0.86  Score=21.71  Aligned_cols=34  Identities=21%  Similarity=0.452  Sum_probs=30.2

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             776689879-8799999999996599089983588
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .|||+|.|| |.-|-..+..|.++|++|+++.|..
T Consensus         3 ~KkVlITGatG~iG~~l~~~Ll~~g~~V~~~~r~~   37 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRS   37 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             29999988998899999999997849899998999


No 459
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=87.66  E-value=0.7  Score=22.27  Aligned_cols=35  Identities=26%  Similarity=0.251  Sum_probs=28.1

Q ss_pred             CCCEEEECCCH-HHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             77668987987-999999999965990899835888
Q T0604           107 TERPIVIGFGP-CGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaGp-AGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .|.|+|.|+.- -|..+|..|++.|++|++..|..+
T Consensus         7 gk~~lItG~s~giG~aia~~l~~~G~~V~~~~r~~~   42 (244)
T 1cyd_A            7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS   42 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             998999488978999999999987998999979889


No 460
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=87.64  E-value=1  Score=21.25  Aligned_cols=36  Identities=22%  Similarity=0.301  Sum_probs=26.8

Q ss_pred             CCCCCEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             767766898-79-8799999999996599089983588
Q T0604           105 NLTERPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       105 ~~~~rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .++.||++| || +--|...|..|++.|++|++..|..
T Consensus        29 ~lkgKvalITGas~GIG~aia~~la~~Ga~Vv~~~r~~   66 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV   66 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             74997899928887899999999998799999997988


No 461
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.56  E-value=0.71  Score=22.23  Aligned_cols=32  Identities=19%  Similarity=0.498  Sum_probs=27.9

Q ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEECCCC
Q ss_conf             6898798799999999996599-0899835888
Q T0604           110 PIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKE  141 (549)
Q Consensus       110 VVVVGaGpAGL~AAl~La~~G~-~V~VlErg~~  141 (549)
                      |.|||+|.-|-.+|+.|+..++ +..|++..+.
T Consensus         2 I~iiGaG~VG~~~a~~l~~~~~~el~L~D~~~~   34 (308)
T 2d4a_B            2 ITILGAGKVGMATAVMLMMRGYDDLLLIARTPG   34 (308)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCSCEEEECSSTT
T ss_pred             EEEECCCHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             899997989999999998079997999948987


No 462
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=87.49  E-value=0.52  Score=23.06  Aligned_cols=23  Identities=26%  Similarity=0.174  Sum_probs=13.3

Q ss_pred             EEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             89931887679999999669711
Q T0604           269 VVLAVGHSARDTFEMLHERGVYM  291 (549)
Q Consensus       269 VVlAtGhsard~~~~l~~~Gi~~  291 (549)
                      +|--.|+-+....+.|.+.|..+
T Consensus       256 aIQGfGnVG~~aA~~L~e~Gakv  278 (470)
T 2bma_A          256 VVSGSGNVALYCVQKLLHLNVKV  278 (470)
T ss_dssp             EEECSSHHHHHHHHHHHHTTCEE
T ss_pred             EEECCCCHHHHHHHHHHHCCCEE
T ss_conf             99834526899999876407469


No 463
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, X-RAY diffraction, structural genomics, NPPSFA; HET: SKM; 1.65A {Thermus thermophilus HB8} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.26  E-value=1  Score=21.27  Aligned_cols=24  Identities=29%  Similarity=0.401  Sum_probs=11.6

Q ss_pred             ECEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             056899318876799999996697
Q T0604           266 SRHVVLAVGHSARDTFEMLHERGV  289 (549)
Q Consensus       266 ad~VVlAtGhsard~~~~l~~~Gi  289 (549)
                      ...+|+..|+.|+-....+...+.
T Consensus       117 ~~~~ilG~GG~a~a~~~~l~~~~~  140 (263)
T 2d5c_A          117 GPALVLGAGGAGRAVAFALREAGL  140 (263)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCHHHHHHHHHHHCCCC
T ss_conf             724797024033321000110122


No 464
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=87.23  E-value=0.72  Score=22.18  Aligned_cols=33  Identities=18%  Similarity=0.181  Sum_probs=25.1

Q ss_pred             CEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             66898-79-87999999999965990899835888
Q T0604           109 RPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       109 rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ||+|| || +--|...|..|++.|++|++..+...
T Consensus         3 KvalVTGas~GIG~aiA~~la~~Ga~V~~~~~~~~   37 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQ   37 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGG
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             89999078868999999999987998999958988


No 465
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=87.22  E-value=1  Score=21.29  Aligned_cols=31  Identities=26%  Similarity=0.260  Sum_probs=25.0

Q ss_pred             EEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             6898-79-8799999999996599089983588
Q T0604           110 PIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       110 VVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      ||+| || +--|...|..|+++|++|+++.+.+
T Consensus         3 VvlVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~   35 (257)
T 1fjh_A            3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EEEECCCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             999917877999999999998899899997985


No 466
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.21  E-value=0.71  Score=22.22  Aligned_cols=36  Identities=22%  Similarity=0.264  Sum_probs=31.7

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             668987987999999999965990899835888321
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE  144 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~vg~  144 (549)
                      ||-+||.|..|...|..|.+.|++|.++.+++....
T Consensus         2 kIg~IGlG~mG~~~a~~L~~~G~~v~~~~~~~~~~~   37 (264)
T 1i36_A            2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (264)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEEEEHHHHHHHHHHHHHHCCCEEEEECCCHHHHH
T ss_conf             799984689999999999988996899799841537


No 467
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=87.19  E-value=1.1  Score=21.09  Aligned_cols=36  Identities=17%  Similarity=-0.010  Sum_probs=27.5

Q ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             76689879-8799999999996599089983588832
Q T0604           108 ERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       108 ~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      |.++|.|| +--|..+|..|++.|++|+++.+.+...
T Consensus         9 K~~lITGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~   45 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE   45 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf             9899938887899999999998699999983797445


No 468
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=87.08  E-value=0.87  Score=21.66  Aligned_cols=35  Identities=26%  Similarity=0.366  Sum_probs=27.7

Q ss_pred             CCCEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7766898798-7999999999965990899835888
Q T0604           107 TERPIVIGFG-PCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGaG-pAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+.|+|.||+ --|...|..|++.|++|++..|...
T Consensus        27 g~~VLITGas~GIG~aiA~~la~~G~~V~~~~r~~~   62 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH   62 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             196999778559999999999988998999989879


No 469
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=87.03  E-value=1  Score=21.19  Aligned_cols=34  Identities=18%  Similarity=0.231  Sum_probs=26.2

Q ss_pred             CCCEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             7766898-79-8799999999996599089983588
Q T0604           107 TERPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .+||++| || +--|...|..|++.|++|++..+..
T Consensus        24 ~kKValITGas~GIG~aiA~~la~~Ga~V~i~~~~~   59 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSER   59 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSC
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             997899918876899999999998799899995893


No 470
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=87.03  E-value=0.81  Score=21.86  Aligned_cols=22  Identities=14%  Similarity=0.256  Sum_probs=8.7

Q ss_pred             CEEEEECCCCHHHHHHHHHHCC
Q ss_conf             5689931887679999999669
Q T0604           267 RHVVLAVGHSARDTFEMLHERG  288 (549)
Q Consensus       267 d~VVlAtGhsard~~~~l~~~G  288 (549)
                      ..+|+..|+.++-....+...+
T Consensus       121 ~vli~G~Gg~a~a~~~~~~~~~  142 (272)
T 1p77_A          121 HVLILGAGGATKGVLLPLLQAQ  142 (272)
T ss_dssp             EEEEECCSHHHHTTHHHHHHTT
T ss_pred             EEEEECCHHHHHHHHHHHHHCC
T ss_conf             6998234177999999987369


No 471
>1ulu_A Enoyl-acyl carrier protein reductase; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.2.1.2 PDB: 2yw9_A*
Probab=87.01  E-value=0.79  Score=21.92  Aligned_cols=36  Identities=14%  Similarity=0.303  Sum_probs=27.4

Q ss_pred             CCCEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             776689879-8--79999999999659908998358883
Q T0604           107 TERPIVIGF-G--PCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       107 ~~rVVVVGa-G--pAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      .|.++|.|| |  --|+..|..|++.|++|++..|....
T Consensus         8 gK~~lVTGasg~~GIG~aia~~la~~Ga~Vvi~~r~~~~   46 (261)
T 1ulu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL   46 (261)
T ss_dssp             TCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf             997999799998649999999999879999998074777


No 472
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii RH} PDB: 2o50_A
Probab=86.98  E-value=0.72  Score=22.19  Aligned_cols=34  Identities=18%  Similarity=0.117  Sum_probs=27.5

Q ss_pred             CCCEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             776689879-8--799999999996599089983588
Q T0604           107 TERPIVIGF-G--PCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       107 ~~rVVVVGa-G--pAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      .|.++|.|| |  --|...|..|++.|++|++..+..
T Consensus         9 gK~alVTGAags~GIG~aiA~~la~~Ga~Vvi~~~~~   45 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPP   45 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             9989997999997799999999998799999982760


No 473
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B}
Probab=86.88  E-value=1  Score=21.29  Aligned_cols=30  Identities=23%  Similarity=0.397  Sum_probs=27.1

Q ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             6689879-87999999999965990899835
Q T0604           109 RPIVIGF-GPCGLFAGLVLAQMGFNPIIVER  138 (549)
Q Consensus       109 rVVVVGa-GpAGL~AAl~La~~G~~V~VlEr  138 (549)
                      .|+|.|| |--|...+..|.+.|++|+++++
T Consensus         7 tVLITGatGfIGs~l~~~Ll~~g~~V~~~d~   37 (341)
T 3enk_A            7 TILVTGGAGYIGSHTAVELLAHGYDVVIADN   37 (341)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             5999748868999999999978497999978


No 474
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=86.87  E-value=1.1  Score=20.98  Aligned_cols=35  Identities=17%  Similarity=0.096  Sum_probs=26.2

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             776689879-87999999999965990899835888
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+.++|.|| +--|..+|..|++.|++|++..|..+
T Consensus         5 gK~aLITGas~GIG~a~A~~la~~G~~V~l~~r~~~   40 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDE   40 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             999999589739999999999987998999979879


No 475
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.86  E-value=0.83  Score=21.79  Aligned_cols=25  Identities=16%  Similarity=0.284  Sum_probs=16.6

Q ss_pred             ECEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf             0568993188767999999966971
Q T0604           266 SRHVVLAVGHSARDTFEMLHERGVY  290 (549)
Q Consensus       266 ad~VVlAtGhsard~~~~l~~~Gi~  290 (549)
                      ...+|+..|+.||-....+...|+.
T Consensus       120 ~~~lIlG~GGaa~ai~~~l~~~g~~  144 (271)
T 1npy_A          120 AKVIVHGSGGMAKAVVAAFKNSGFE  144 (271)
T ss_dssp             SCEEEECSSTTHHHHHHHHHHTTCC
T ss_pred             CCEEEECCHHHHHHHHHHHHHCCCC
T ss_conf             7189985617888879888664874


No 476
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=86.75  E-value=1.1  Score=20.94  Aligned_cols=38  Identities=16%  Similarity=0.198  Sum_probs=27.4

Q ss_pred             CCCCCCCEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             87767766898-79-8799999999996599089983588
Q T0604           103 PENLTERPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       103 ~~~~~~rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      ..+++-|+++| || +--|+..|..|++.|++|++..+..
T Consensus        24 ~~sLkgK~alITGas~GIG~aia~~la~~Ga~Vii~~~~~   63 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANS   63 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf             9799999899928887899999999998799899971873


No 477
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, antibiotic biosynthesis, NADPH; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=86.68  E-value=1.1  Score=20.91  Aligned_cols=38  Identities=26%  Similarity=0.237  Sum_probs=26.2

Q ss_pred             CCCCCCEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7767766898-79-87999999999965990899835888
Q T0604           104 ENLTERPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       104 ~~~~~rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+++.|+++| || +--|...|..|++.|++|++..|..+
T Consensus         3 ~~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~   42 (247)
T 2jah_A            3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVE   42 (247)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             6649698999387878999999999987998999989899


No 478
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta-hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A*
Probab=86.67  E-value=1.1  Score=20.94  Aligned_cols=33  Identities=24%  Similarity=0.271  Sum_probs=24.9

Q ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             76689879-8799999999996599089983588
Q T0604           108 ERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       108 ~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      |.++|.|| +--|...|..|++.|++|++..|..
T Consensus         5 K~alITGas~GIG~aiA~~la~~Ga~V~i~~r~~   38 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD   38 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             9999938787899999999998799899996985


No 479
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=86.54  E-value=0.77  Score=22.00  Aligned_cols=34  Identities=26%  Similarity=0.366  Sum_probs=31.1

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             6689879879999999999659908998358883
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV  142 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~~v  142 (549)
                      +|-+||-|.-|.--|..|+++|++|.+++|.+..
T Consensus         3 kIG~IGLG~MG~~mA~nL~~~G~~V~v~dr~~~k   36 (478)
T 1pgj_A            3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSK   36 (478)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             EEEEECHHHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             6999763587999999999679937999499999


No 480
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B}
Probab=86.52  E-value=0.88  Score=21.65  Aligned_cols=35  Identities=17%  Similarity=0.143  Sum_probs=25.8

Q ss_pred             CCCCCEEEEC--CCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             7677668987--9879999999999659908998358
Q T0604           105 NLTERPIVIG--FGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       105 ~~~~rVVVVG--aGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      .|+.||++|=  ++--|...|..|++.|++|++..+.
T Consensus        10 ~m~~KvalITGas~GIG~aiA~~la~~G~~Vi~~~~~   46 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGP   46 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             7299889993888789999999999879989998089


No 481
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=86.52  E-value=0.89  Score=21.62  Aligned_cols=24  Identities=17%  Similarity=0.225  Sum_probs=13.0

Q ss_pred             EEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             899318876799999996697111
Q T0604           269 VVLAVGHSARDTFEMLHERGVYME  292 (549)
Q Consensus       269 VVlAtGhsard~~~~l~~~Gi~~~  292 (549)
                      +|---|+-++..-+.|.+.|..+.
T Consensus       179 aIQGfGnVG~~~a~~L~~~Ga~vv  202 (355)
T 1c1d_A          179 LVQGLGAVGGSLASLAAEAGAQLL  202 (355)
T ss_dssp             EEECCSHHHHHHHHHHHHTTCEEE
T ss_pred             EEEECCHHHHHHHHHHHHCCCEEE
T ss_conf             999214477899999997198666


No 482
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=86.48  E-value=0.77  Score=21.99  Aligned_cols=32  Identities=13%  Similarity=0.058  Sum_probs=28.4

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCC--EEEEEECCC
Q ss_conf             66898798799999999996599--089983588
Q T0604           109 RPIVIGFGPCGLFAGLVLAQMGF--NPIIVERGK  140 (549)
Q Consensus       109 rVVVVGaGpAGL~AAl~La~~G~--~V~VlErg~  140 (549)
                      +|.|||+|--|-..|+.|+..+.  +..|++...
T Consensus         2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~   35 (294)
T 1oju_A            2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE   35 (294)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             7999994889999999998379988799990789


No 483
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=86.44  E-value=1.1  Score=20.97  Aligned_cols=35  Identities=17%  Similarity=0.122  Sum_probs=26.7

Q ss_pred             CCCEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7766898-79-87999999999965990899835888
Q T0604           107 TERPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      +.||++| || +--|...|..|++.|++|++..|...
T Consensus         4 ~gKV~lITGas~GIG~aia~~la~~G~~V~~~~r~~~   40 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTE   40 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             9999999088869999999999987999999989999


No 484
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa}
Probab=86.41  E-value=1.2  Score=20.82  Aligned_cols=38  Identities=24%  Similarity=0.290  Sum_probs=27.7

Q ss_pred             CCCCCCEEEE-CC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             7767766898-79-87999999999965990899835888
Q T0604           104 ENLTERPIVI-GF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       104 ~~~~~rVVVV-Ga-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .++.-||++| || +--|...|..|++.|++|++..|...
T Consensus        10 ~~L~gKvalVTGas~GIG~aia~~l~~~G~~Vv~~~r~~~   49 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQE   49 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             8889997999378878999999999987998999989889


No 485
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=86.39  E-value=1  Score=21.29  Aligned_cols=37  Identities=24%  Similarity=0.261  Sum_probs=26.5

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             776689879-8799999999996599089983588832
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKEVR  143 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~vg  143 (549)
                      .|.++|.|| +--|...|..|++.|++|++..|.....
T Consensus        15 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~   52 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP   52 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHH
T ss_conf             99799938888899999999998799899997982210


No 486
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: NAP; 2.07A {Thermotoga maritima MSB8} SCOP: c.2.1.2
Probab=86.37  E-value=1.2  Score=20.81  Aligned_cols=35  Identities=23%  Similarity=0.325  Sum_probs=0.0

Q ss_pred             CCCCCEEEE--CCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             767766898--79879999999999659908998358
Q T0604           105 NLTERPIVI--GFGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       105 ~~~~rVVVV--GaGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      +++.|+++|  |++--|...|..|++.|++|++..|.
T Consensus        18 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   54 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN   54 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             7899989994898789999999999879989999798


No 487
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=86.33  E-value=1.2  Score=20.90  Aligned_cols=34  Identities=24%  Similarity=0.193  Sum_probs=0.0

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             6776689879-879999999999659908998358
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      ..|.++|.|| +--|...|..|++.|++|++..|.
T Consensus        18 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~   52 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN   52 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             99989994888689999999999879999999899


No 488
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, structural genomics, PSI; 2.00A {Aquifex aeolicus VF5}
Probab=86.27  E-value=0.67  Score=22.38  Aligned_cols=40  Identities=10%  Similarity=0.118  Sum_probs=0.0

Q ss_pred             CCCCEEEECCC---HHHHHHHHHHHHCCCEEEEEECCCCCCCC
Q ss_conf             67766898798---79999999999659908998358883211
Q T0604           106 LTERPIVIGFG---PCGLFAGLVLAQMGFNPIIVERGKEVRER  145 (549)
Q Consensus       106 ~~~rVVVVGaG---pAGL~AAl~La~~G~~V~VlErg~~vg~r  145 (549)
                      ..+.++|-||+   --|...|..|++.|++|++..+.+.....
T Consensus        20 ~gK~alVTGas~~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~   62 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKR   62 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
T ss_conf             8997999899998679999999999869999998488689999


No 489
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, structural genomics; HET: NAP; 2.25A {Homo sapiens}
Probab=86.18  E-value=1.2  Score=20.75  Aligned_cols=45  Identities=18%  Similarity=0.166  Sum_probs=0.0

Q ss_pred             CCCCCCCCCEEEE--CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC
Q ss_conf             7887767766898--79879999999999659908998358883211
Q T0604           101 KAPENLTERPIVI--GFGPCGLFAGLVLAQMGFNPIIVERGKEVRER  145 (549)
Q Consensus       101 ~~~~~~~~rVVVV--GaGpAGL~AAl~La~~G~~V~VlErg~~vg~r  145 (549)
                      +.+-++.-||++|  |++--|+..|..|++.|++|++..|.......
T Consensus        38 ~~~grL~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~   84 (346)
T 3kvo_A           38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPK   84 (346)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSS
T ss_pred             CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
T ss_conf             99977699879990788699999999999889989999797777899


No 490
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, lipid metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=86.12  E-value=1.2  Score=20.73  Aligned_cols=37  Identities=14%  Similarity=0.065  Sum_probs=0.0

Q ss_pred             CCCCCCCEEEE--CCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             87767766898--79879999999999659908998358
Q T0604           103 PENLTERPIVI--GFGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       103 ~~~~~~rVVVV--GaGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      ..++..||+||  |++--|...|..|++.|++|++..|.
T Consensus         2 ~~rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~   40 (264)
T 2pd6_A            2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLD   40 (264)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             750088889993878789999999999879999999698


No 491
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=86.09  E-value=0.94  Score=21.44  Aligned_cols=33  Identities=27%  Similarity=0.322  Sum_probs=0.0

Q ss_pred             CCCEEEECCCHH-HHHHHHHHHHCCCEEEEEECC
Q ss_conf             776689879879-999999999659908998358
Q T0604           107 TERPIVIGFGPC-GLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       107 ~~rVVVVGaGpA-GL~AAl~La~~G~~V~VlErg  139 (549)
                      .+.++|.||+-. |...|..|++.|++|++..|.
T Consensus        11 GKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~   44 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAASGARLILIDRE   44 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             9989994898789999999999879999999798


No 492
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein, transferase; HET: TNA MTA; 1.66A {Methanothermobacterthermautotrophicus} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A*
Probab=86.08  E-value=0.42  Score=23.66  Aligned_cols=36  Identities=31%  Similarity=0.321  Sum_probs=0.0

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             767766898798799999999996599089983588
Q T0604           105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       105 ~~~~rVVVVGaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      ....+|+-||+||.++++.+.....|.+|+.+|..+
T Consensus       121 ~~~~rVLdvGcG~g~lT~i~la~~~g~~V~gIDis~  156 (298)
T 3fpf_A          121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEP  156 (298)
T ss_dssp             CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSH
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf             999989999173249999999965699899993999


No 493
>1o89_A YHDH, B3253, YHDH; structural genomics, unknown function, possible NADPH-dependent quinone oxidoreductase; 2.25A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 PDB: 1o8c_A*
Probab=85.98  E-value=0.96  Score=21.39  Aligned_cols=41  Identities=20%  Similarity=0.276  Sum_probs=0.0

Q ss_pred             CCCCCCCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             788776776689879-87999999999965990899835888
Q T0604           101 KAPENLTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       101 ~~~~~~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .+.......|+|.|| |+.|+++...+...|.+|+.+++...
T Consensus       162 ~~~~~~~~~vvi~gg~g~~g~~a~~la~~~G~~vi~~~~~~~  203 (345)
T 1o89_A          162 AGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES  203 (345)
T ss_dssp             TTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf             066789999999988878999999888733860464126177


No 494
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, alternative splicing, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=85.93  E-value=0.95  Score=21.41  Aligned_cols=39  Identities=10%  Similarity=0.057  Sum_probs=0.0

Q ss_pred             CCCCCCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             88776776689879-8799999999996599089983588
Q T0604           102 APENLTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       102 ~~~~~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      +.-....+|+|.|| |+.|++++..+...|.+|++....+
T Consensus       158 ~~~~~g~~VlV~ga~g~vG~~ai~~a~~~g~~vi~~~~~~  197 (354)
T 2j8z_A          158 GNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ  197 (354)
T ss_dssp             SCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf             4799999999978989899999999875598599997647


No 495
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3- hydroxybutyryl-COA dehydrogenase, MHBD; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=85.87  E-value=1.3  Score=20.65  Aligned_cols=36  Identities=14%  Similarity=0.154  Sum_probs=0.0

Q ss_pred             CCCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             6776689879-87999999999965990899835888
Q T0604           106 LTERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       106 ~~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ..|.++|.|| +--|...|..|++.|++|+++.|...
T Consensus        11 kGKvalITGas~GIG~aia~~la~~Ga~V~~~~~~~~   47 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS   47 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             9998999286878999999999987998999969878


No 496
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogenase; structural genomics, short-chain dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=85.80  E-value=1.3  Score=20.63  Aligned_cols=37  Identities=11%  Similarity=0.066  Sum_probs=0.0

Q ss_pred             CCCCCCCEEEE--CCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf             87767766898--79879999999999659908998358
Q T0604           103 PENLTERPIVI--GFGPCGLFAGLVLAQMGFNPIIVERG  139 (549)
Q Consensus       103 ~~~~~~rVVVV--GaGpAGL~AAl~La~~G~~V~VlErg  139 (549)
                      ..-++-||++|  |++--|...|..|++.|++|++..|.
T Consensus         2 ~~~L~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~   40 (267)
T 2gdz_A            2 AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN   40 (267)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             865399889993868789999999999879989999797


No 497
>2o7s_A DHQ-SDH, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase; NADPH, dehydroshikimate, bifunctional enzyme, oxidoreductase; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=85.75  E-value=0.79  Score=21.91  Aligned_cols=32  Identities=25%  Similarity=0.355  Sum_probs=0.0

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             77668987987999999999965990899835
Q T0604           107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVER  138 (549)
Q Consensus       107 ~~rVVVVGaGpAGL~AAl~La~~G~~V~VlEr  138 (549)
                      .+.|+|+|+|-++-.+++.|.+.|.+++++.|
T Consensus       364 ~~~vlilGaGGaarai~~al~~~g~~i~i~nr  395 (523)
T 2o7s_A          364 SKTVVVIGAGGAGKALAYGAKEKGAKVVIANR  395 (523)
T ss_dssp             --CEEEECCSHHHHHHHHHHHHHCC-CEEEES
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHCCCEEEEECC
T ss_conf             33635440643889999999866987883068


No 498
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=85.73  E-value=0.78  Score=21.97  Aligned_cols=33  Identities=18%  Similarity=0.187  Sum_probs=0.0

Q ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             6689879-87999999999965990899835888
Q T0604           109 RPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       109 rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      ||+|.|| |--|...+-.|.++|++|+.+-|.++
T Consensus         2 kIlV~GatG~iG~~lv~~Ll~~g~~V~~~~R~~~   35 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE   35 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             5999999988999999999978398999988878


No 499
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=85.68  E-value=1.3  Score=20.60  Aligned_cols=37  Identities=11%  Similarity=-0.029  Sum_probs=0.0

Q ss_pred             CCCCCCEEEE--CCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             7767766898--798799999999996599089983588
Q T0604           104 ENLTERPIVI--GFGPCGLFAGLVLAQMGFNPIIVERGK  140 (549)
Q Consensus       104 ~~~~~rVVVV--GaGpAGL~AAl~La~~G~~V~VlErg~  140 (549)
                      ..+..+|+||  |++--|...|..|++.|.+|++..+..
T Consensus        42 ~~~~~~VAlITGgs~GIG~aiA~~La~~Ga~Vvi~~~~~   80 (328)
T 2qhx_A           42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   80 (328)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             899999899947788899999999998799899982898


No 500
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=85.67  E-value=1.3  Score=20.61  Aligned_cols=35  Identities=14%  Similarity=0.110  Sum_probs=0.0

Q ss_pred             CCCEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             776689879-87999999999965990899835888
Q T0604           107 TERPIVIGF-GPCGLFAGLVLAQMGFNPIIVERGKE  141 (549)
Q Consensus       107 ~~rVVVVGa-GpAGL~AAl~La~~G~~V~VlErg~~  141 (549)
                      .|+|+|.|| +--|...|..|++.|++|+++++...
T Consensus         7 ~K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~   42 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN   42 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             999999689878999999999988999999968966


Done!