Query T0609 NP_347334.1, CLOSTRIDIUM ACETOBUTYLICUM, 340 residues
Match_columns 340
No_of_seqs 133 out of 2509
Neff 9.3
Searched_HMMs 15564
Date Mon Jul 5 09:06:41 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0609.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0609.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1z45a1 b.30.5.4 (A:358-699) G 100.0 0 0 335.5 30.5 310 12-337 11-341 (342)
2 d1lura_ b.30.5.4 (A:) Aldose 1 100.0 0 0 334.9 29.4 298 18-340 3-328 (329)
3 d1nsza_ b.30.5.4 (A:) Galactos 100.0 0 0 327.1 30.9 303 9-338 3-336 (340)
4 d1so0a_ b.30.5.4 (A:) Galactos 100.0 0 0 319.6 30.8 296 16-337 20-341 (344)
5 d1jova_ b.30.5.7 (A:) Hypothet 100.0 2.3E-38 1.5E-42 238.4 23.4 244 11-336 15-269 (269)
6 d1k1xa2 b.30.5.8 (A:385-659) 4 96.9 0.0042 2.7E-07 33.9 8.6 148 11-174 8-183 (275)
7 d1ejxb_ b.85.3.1 (B:) Urease, 62.8 2.6 0.00017 17.7 2.6 30 156-187 13-42 (101)
8 d4ubpb_ b.85.3.1 (B:) Urease, 57.2 2.9 0.00019 17.4 2.0 30 156-187 15-44 (122)
9 d4ubpb_ b.85.3.1 (B:) Urease, 48.2 5 0.00032 16.0 2.0 30 156-187 15-44 (122)
10 d1e9ya1 b.85.3.1 (A:106-238) U 46.4 3.5 0.00023 16.9 1.0 30 156-187 13-42 (133)
11 d1jz8a4 b.30.5.1 (A:731-1023) 28.9 14 0.00088 13.5 7.4 35 17-54 14-48 (293)
12 d1ibxa_ d.15.2.1 (A:) Caspase- 26.6 8.8 0.00057 14.6 0.4 23 294-331 58-80 (81)
13 d1c9fa_ d.15.2.1 (A:) Caspase- 23.8 8.5 0.00054 14.7 -0.1 24 294-332 61-84 (87)
14 d1c9fa_ d.15.2.1 (A:) Caspase- 23.6 8.6 0.00055 14.7 -0.1 23 294-331 61-83 (87)
15 d1so9a_ b.146.1.1 (A:) Cytochr 20.7 15 0.00099 13.2 0.7 45 129-178 12-59 (131)
No 1
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=0 Score=335.50 Aligned_cols=310 Identities=17% Similarity=0.206 Sum_probs=237.6
Q ss_pred EECCCEEEEEEECCC-EEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCHHCC-CCCCCCEEECCCCCEECCCEEEE
Q ss_conf 520886899998798-4999950148689999998898599963588443300027-63211347736886200886887
Q T0609 12 IIWSEHKCIRFAAGG-YEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFKN-RPQVYGLPVLFPPNRIDDGTFKL 89 (340)
Q Consensus 12 ~~~~g~~~v~l~n~~-~~~~i~p~~Ga~i~sl~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~G~pi~~p~~Ri~~g~f~~ 89 (340)
-+....+.|+|+|+. ++|+|+ ++||+|++|+.++ .++++.++ ..+.|.. .+.++|+.++|+||||++|+|++
T Consensus 11 ~~~~~~~~~tl~n~~~~~v~i~-~~GA~i~~l~~~~--~~vvlg~d---~~~~Y~~~~~~y~Ga~iGr~AnRI~~g~f~~ 84 (342)
T d1z45a1 11 DMRYDARFVTIGAGTRFQATFA-NLGASIVDLKVNG--QSVVLGYE---NEEGYLNPDSAYIGATIGRYANRISKGKFSL 84 (342)
T ss_dssp TTCTTSEEEEESTTSSEEEEEE-SBTTCEEEEEETT--EECBCCCS---SHHHHTCTTCCCTTCEECSBCSEEGGGEEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEE-CCCEEEEEEEECC--EEEEECCC---CHHHHHCCCCCEECCEECCCCCEEECCEEEE
T ss_conf 6884169999989996699997-8890999998999--17881799---9899706798637878346488346999999
Q ss_pred CCEEEEECCCCCCCCCCCCCCC---CCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEC--CEEE
Q ss_conf 9978992356887766675665---7753599971136787489999996789862134884599999999804--1899
Q T0609 90 GDKTYKFPINEAKNNNYIHGFI---KNSKWTVHKKKIDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSS--KGLK 164 (340)
Q Consensus 90 ~g~~y~l~~n~~~~~~~~HG~~---~~~~W~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~P~~~~~~~t~~l~~--~~L~ 164 (340)
+|++|+|++|++. +++||.. ..+.|.+.... +.+...++++|.+.+. +...+|||++.++++|+|+. ++|+
T Consensus 85 ~G~~y~L~~Ne~~--~~lHgg~~g~~~~~w~~~~~~-~~~~~~~~~~~~~~~~-~~~~GfPg~~~~~vtY~L~~~~~~l~ 160 (342)
T d1z45a1 85 CNKDYQLTVNNGV--NANHSSIGSFHRKRFLGPIIQ-NPSKDVFTAEYMLIDN-EKDTEFPGDLLVTIQYTVNVAQKSLE 160 (342)
T ss_dssp TTEEEECCCCBTT--BEETTGGGCGGGSBCEEEEEE-EEETTEEEEEEEEEEC-GGGSSSSSEEEEEEEEEEETTTTEEE
T ss_pred CCEEEEECCCCCC--CCCCCCCCCCCCEEEEEEEEE-CCCCCEEEEEEEEECC-CCCCCCEEEEEEEEEEEEECCCCCCE
T ss_conf 9999990578997--656544578771445778874-1677348999998889-87778006899999999923578508
Q ss_pred EEEEEEECCCHHHEECCCCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 999999488703100001362476047777632450588703417862776566774237788623336677434-6553
Q T0609 165 QTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAV-ASHP 243 (340)
Q Consensus 165 i~~~v~N~~~~~~p~~~~~H~YF~~~~~~~~~~~~~~l~~~~~~~~~~d~~~lptg~~~~~~~~~~~~~~~~~~~-~~~~ 243 (340)
++++++|.+++++|+++++|||||++...+..+.+++|++++..++++|++.||||+..++..+.+|+....... ....
T Consensus 161 i~~~~~~~~d~~tP~nl~~H~YFNL~g~~~~~i~~h~L~i~a~~~~~~d~~~iPTG~~~~v~~t~~df~~~~~i~~~~~~ 240 (342)
T d1z45a1 161 IVYKGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQ 240 (342)
T ss_dssp EEEEEEEEESSEEECBCEECCEECTTTTSCSSSTTEEEEESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCC
T ss_pred EEEEEECCCCCCEEEEEECCEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf 99999505786148886131168616877513530378875688998746665433445777885332265434556552
Q ss_pred CCCEEECCCCC-------CCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEECCC------CCCCEEEEECCCCCCCCCC
Q ss_conf 24012045423-------4886632799971899839999985998868996488------6688399941558888888
Q T0609 244 IESLFSLKDID-------VNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDM------GDKKYACIEPQTSIINSPN 310 (340)
Q Consensus 244 ~D~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~------g~~~~vciEP~t~~pda~n 310 (340)
+|++|...... ........+.+.++.+|+.|.+..+ .|.+++|++. ..+..||||||+ +|||+|
T Consensus 241 ~d~~~~~d~~~~~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~--~p~~qvYT~~~~~~~~~~~~g~clEpq~-~PdA~N 317 (342)
T d1z45a1 241 FDCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLST--EPTYQFYTGDFLSAGYEARQGFAIEPGR-YIDAIN 317 (342)
T ss_dssp CEEEEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEES--SSEEEEECCTTCCTTCCTTSCEEEEEES-CSSGGG
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECC--CCEEEEECCCCCCCCCCCCCEEEEECCC-CCCCCC
T ss_conf 1024410588763222555676416899992898968999828--9879998898678888888899995888-987557
Q ss_pred CCCCCCCCCCEEECCCCEEEEEEEEEE
Q ss_conf 888776257689698977999999999
Q T0609 311 VKLDRSVSGFKTLKPNESWSGVCKLYI 337 (340)
Q Consensus 311 ~~~~~~~~g~~~L~pGe~~~~~~~~~v 337 (340)
++.+++ +++|+|||++...+.+++
T Consensus 318 ~~~~~~---~i~L~pGe~y~~~t~y~F 341 (342)
T d1z45a1 318 QENWKD---CVTLKNGETYGSKIVYRF 341 (342)
T ss_dssp CTTTGG---GGEEETTCEEEEEEEEEE
T ss_pred CCCCCC---CEEECCCCEEEEEEEEEE
T ss_conf 868998---767099698999999997
No 2
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00 E-value=0 Score=334.85 Aligned_cols=298 Identities=15% Similarity=0.209 Sum_probs=236.0
Q ss_pred EEEEEECCC-EEEEEECCCCCEEEEEEECCC---CEEEEECCCCCCCCCHHCCCCCCCCEEECCCCCEECCCEEEECCEE
Q ss_conf 899998798-499995014868999999889---8599963588443300027632113477368862008868879978
Q T0609 18 KCIRFAAGG-YEALIIPDVGGNVVELKDTNK---GVTILRTPKKDLKFEDFKNRPQVYGLPVLFPPNRIDDGTFKLGDKT 93 (340)
Q Consensus 18 ~~v~l~n~~-~~~~i~p~~Ga~i~sl~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~G~pi~~p~~Ri~~g~f~~~g~~ 93 (340)
.+|+|+|.. ++|+|+ ++||+|.+|++..+ ..++++.++ ..++|...+.++|+.|+|+||||++|+|.++|++
T Consensus 3 ~~i~l~N~~g~~v~i~-~~GA~i~~l~~pd~~g~~~~vvlg~d---~~~~Y~~~~~~~Ga~igr~aNRI~~g~f~~~G~~ 78 (329)
T d1lura_ 3 GFIEIANKQGLTATLL-PFGATLAKLTFPDKNGKNQDLVLGFD---TIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQ 78 (329)
T ss_dssp CCEEEECSSSCEEEEE-TBTTEEEEEEEECTTSCEEECBCCCS---SHHHHHHCSSCTTCEECSBCSEEGGGEEEETTEE
T ss_pred CEEEEECCCCCEEEEE-CCCCEEEEEEEECCCCCEEEEEECCC---CHHHHHHCCCCCCCEECCCCCEEECCEEEECCEE
T ss_conf 6799997999399998-87929999998887898803087899---9899820887647582670770648869899999
Q ss_pred EEECCCCCCCCCCCCCCCCC---CCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECC-EEEEEEEE
Q ss_conf 99235688776667566577---535999711367874899999967898621348845999999998041-89999999
Q T0609 94 YKFPINEAKNNNYIHGFIKN---SKWTVHKKKIDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSSK-GLKQTTSV 169 (340)
Q Consensus 94 y~l~~n~~~~~~~~HG~~~~---~~W~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~P~~~~~~~t~~l~~~-~L~i~~~v 169 (340)
|+|++|++ ++++||+... +.|+++.... ..+++++...+ +..+|||+++++++|+|+++ .|+++++.
T Consensus 79 y~L~~N~~--~n~lHGg~~g~~~~~w~v~~~~~----~~v~~~~~~~~---~~~GyPg~l~~~vtY~L~~~~~l~i~~~a 149 (329)
T d1lura_ 79 YTMTPNNG--PHYLHGGPNGLGYRKWEVVRHAP----ESVSFSVRANE---QDDGLPGDAKIDVTYTVNDRNQLIIEHHA 149 (329)
T ss_dssp EECCCSBT--TBEETTCTTSGGGSBCEEEEEET----TEEEEEEEEEH---HHHSSSSEEEEEEEEEECTTSEEEEEEEE
T ss_pred EEECCCCC--CCCCCCCCCCCCEEEEEEEEECC----CEEEEEEEECC---CCCCCCCCEEEEEEEEECCCCEEEEEEEE
T ss_conf 88236778--86346677984367777886057----60699998248---76676542689999998248789999788
Q ss_pred EECCCHHHEECCCCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------
Q ss_conf 948870310000136247604777763245058870341786277656677423778862333667743465--------
Q T0609 170 VNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVAS-------- 241 (340)
Q Consensus 170 ~N~~~~~~p~~~~~H~YF~~~~~~~~~~~~~~l~~~~~~~~~~d~~~lptg~~~~~~~~~~~~~~~~~~~~~-------- 241 (340)
.+++++|+++++|+|||++. +.++.+|+|+++++.++++|++.||||+...+.++.+|+... ..+..
T Consensus 150 --~~d~~tp~nlt~H~YFnL~~--~~~i~~h~L~i~a~~~l~~d~~~iPtG~~~~v~~t~~Dfr~~-~~l~~~~~~~~~~ 224 (329)
T d1lura_ 150 --TCDTPGLLALTNHAYWNLDG--SDTVAEHFLEMEADEFVEVDDTFCPTGAIRSVTDTGFDFRSG-KQLKESGKDAEEL 224 (329)
T ss_dssp --ECSSCEECBCEECCEECSSC--CSCSTTCEEEECEEEEEEECTTSCEEEEEEECTTSTTCCTTC-EETTCSCCCSSCC
T ss_pred --EECCCCCCCCCCCCEEECCC--CCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
T ss_conf --60653212324665164132--223557089957671997475436443213543553344364-3454333454431
Q ss_pred CCCCCEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEECCCC------------CCCEEEEECCCCCCCCC
Q ss_conf 532401204542348866327999718998399999859988689964886------------68839994155888888
Q T0609 242 HPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMG------------DKKYACIEPQTSIINSP 309 (340)
Q Consensus 242 ~~~D~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~g------------~~~~vciEP~t~~pda~ 309 (340)
..+|++|..............+.+.++.+|++|.+..+ .|.+++|++.. .+..||||||+ +|||+
T Consensus 225 ~~~d~~~~~~~~~~~~~~~~~~~l~~~~sg~~l~v~t~--~p~~qvYT~~~l~~~~~~g~~~~~~~gi~lEpq~-~PdA~ 301 (329)
T d1lura_ 225 LDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTS--YPVIHLYASKFLDCKGKKGEHYKANKALAIEPQF-HSAAP 301 (329)
T ss_dssp CCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEES--SSEEEEECCTTCCEECGGGCEECTTCCEEEEEES-CTTGG
T ss_pred EECCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEECC--CCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCC-CCCCC
T ss_conf 41378779853146887513489967987669999679--9889996898767778798796899989997369-99854
Q ss_pred CCCCCCCCCCCEEECCCCEEEEEEEEEEEEC
Q ss_conf 8888776257689698977999999999859
Q T0609 310 NVKLDRSVSGFKTLKPNESWSGVCKLYIENM 340 (340)
Q Consensus 310 n~~~~~~~~g~~~L~pGe~~~~~~~~~ve~~ 340 (340)
|++++++ ++|+|||+++.++.|++.+|
T Consensus 302 N~~~f~~----~~L~pge~y~~~~~y~Fs~~ 328 (329)
T d1lura_ 302 NFDHFPD----VSLRPGDHYCQEIVYTFSHV 328 (329)
T ss_dssp GCTTSCC----CEECTTCCEEEEEEEEEEEC
T ss_pred CCCCCCC----EEECCCCEEEEEEEEEEECC
T ss_conf 6678998----18999999988999998617
No 3
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]}
Probab=100.00 E-value=0 Score=327.11 Aligned_cols=303 Identities=14% Similarity=0.168 Sum_probs=232.4
Q ss_pred EEEEECCCEEEEEEECCC-EEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCHHCCCCCCCCEEECCCCCEECCCEE
Q ss_conf 523520886899998798-4999950148689999998898599963588443300027632113477368862008868
Q T0609 9 KEEIIWSEHKCIRFAAGG-YEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFKNRPQVYGLPVLFPPNRIDDGTF 87 (340)
Q Consensus 9 ~~~~~~~g~~~v~l~n~~-~~~~i~p~~Ga~i~sl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~G~pi~~p~~Ri~~g~f 87 (340)
+-+...++.+.|||+|.. ++++|+ .+||.|++++. .+.++++.++ ..+.|..++.++|+.|+|+||||++|+|
T Consensus 3 ~~~~fg~~~~~~tl~N~~gl~v~i~-~~GA~i~~~~~--~~~~vvlg~d---~~~~y~~~~~~~Ga~vGp~anRI~~g~f 76 (340)
T d1nsza_ 3 KIRDFGLGSDLISLTNKAGVTISFT-NLGARIVDWQK--DGKHLILGFD---SAKEYLEKDAYPGATVGPTAGRIKDGLV 76 (340)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEE-TBTTEEEEEEE--TTEESBCCCS---SHHHHHHHCSCTTCEECSBCSEEGGGEE
T ss_pred EECCCCCCEEEEEEECCCCCEEEEE-CCCEEEEEECC--CCCEEEECCC---CHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 6702898506999994998199997-99959998204--9975894699---9899830888307681453671448830
Q ss_pred EECCEEEEECCCCCCCCCCCCCCCC---CCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECC-EE
Q ss_conf 8799789923568877666756657---7535999711367874899999967898621348845999999998041-89
Q T0609 88 KLGDKTYKFPINEAKNNNYIHGFIK---NSKWTVHKKKIDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSSK-GL 163 (340)
Q Consensus 88 ~~~g~~y~l~~n~~~~~~~~HG~~~---~~~W~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~P~~~~~~~t~~l~~~-~L 163 (340)
.++|+.|+|++|++ ++++||+.. .+.|++.... .....+|++++...+ +..+||++++++++|+|+++ .|
T Consensus 77 ~~~G~~~~L~~Ne~--~~~lHGG~~g~~~~~w~~~~~~-~~~~~~v~f~~~~~~---g~~GfPg~~~~~vtY~L~~~~~l 150 (340)
T d1nsza_ 77 KISGKDYILNQNEG--PQTLHGGEESIHTKLWTYEVTD-LGAEVQVKFSLVSND---GTNGYPGKIEMSVTHSFDDDNKW 150 (340)
T ss_dssp EETTEEEECCCCBT--TBEETTSTTCGGGSBCEEEEEE-CSSEEEEEEEEEECT---TGGGCCSCEEEEEEEEEETTCEE
T ss_pred CCCCEEEEECCCCC--CCCCCCCCCCCCCEEEEEEEEC-CCCCCEEEEEEECCC---CCCCCCCCEEEEEEEEECCCCEE
T ss_conf 18998987168889--8621345456564356677662-788617999998576---45686641689999997269808
Q ss_pred EEEEEEEECCCHHHEECCCCCCEEECCCCCCCCCCCEEEEEECCCEEEE-CCCCCCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 9999999488703100001362476047777632450588703417862-7765667742377886233366774346--
Q T0609 164 KQTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQ-DSRNLPTGESFAPTGEQKEYLENGVAVA-- 240 (340)
Q Consensus 164 ~i~~~v~N~~~~~~p~~~~~H~YF~~~~~~~~~~~~~~l~~~~~~~~~~-d~~~lptg~~~~~~~~~~~~~~~~~~~~-- 240 (340)
+++++ |.+++++|+++++|+|||+++....++.+++|++++.+++++ |..+||||+..++.++.+||.... .+.
T Consensus 151 ~i~~~--a~~~~~tp~nlt~H~YFnL~g~~~~~i~~h~L~i~a~~~l~~~D~~~iPTG~~~~v~~t~~Dfr~~~-~l~~~ 227 (340)
T d1nsza_ 151 KIHYE--AISDKDTVFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEK-QLSNA 227 (340)
T ss_dssp EEEEE--EEESSCEECBCEECCEECTTSCTTSCGGGCEEEECEEEECCBCSTTCCBCSCCEECTTSTTCCSSCE-EHHHH
T ss_pred EEEEE--EEECCCCEEEECCCCCEECCCCCCCCCCHHEEEECCCEEEEECCCCCCCCCEECCCCCCCCCCCCCE-EECCC
T ss_conf 99999--9827760566146652003887556420004620375799973787665751514423432456760-30641
Q ss_pred ----------CCCCCCEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEECC-------------CCCCCEE
Q ss_conf ----------55324012045423488663279997189983999998599886899648-------------8668839
Q T0609 241 ----------SHPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWND-------------MGDKKYA 297 (340)
Q Consensus 241 ----------~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~-------------~g~~~~v 297 (340)
...+|++|.+...... ...+.+.+ ++++|++..+ .|.+++||. ......|
T Consensus 228 ~~~~~~~~~~~~G~D~~fvl~~~~~~---~~~~~l~~--~~~~l~v~T~--~p~~qvYT~n~~~~~~~~~~~~~~~~~gi 300 (340)
T d1nsza_ 228 FNSNMEQVQLVKGIDHPFLLDQLGLD---KEQARLTL--DDTSISVFTD--QPSIVIFTANFGDLGTLYHEKKQVHHGGI 300 (340)
T ss_dssp HTCCCHHHHHHTSCEEEEEESSCBTT---SCCEEEEE--TTEEEEEEES--SSEEEEECCCCTTCCCEETTEECCTTCCE
T ss_pred CCCCHHHHCCCCCCCCCEEECCCCCC---CCEEEEEC--CCCCEEEEEC--CCEEEEECCCCCCCCCCCCCCCCCCCCEE
T ss_conf 01313341256788874562567887---42369943--9975899968--99899983776776555788767887889
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEE
Q ss_conf 99415588888888887762576896989779999999998
Q T0609 298 CIEPQTSIINSPNVKLDRSVSGFKTLKPNESWSGVCKLYIE 338 (340)
Q Consensus 298 ciEP~t~~pda~n~~~~~~~~g~~~L~pGe~~~~~~~~~ve 338 (340)
||||| .+|||+|++++++ ++|+|||+++.++.+++.
T Consensus 301 ~lEpq-~~Pda~N~~~f~~----~~L~pge~y~~~t~Y~Fs 336 (340)
T d1nsza_ 301 TFECQ-VSPGSEQIPELGD----ISLKAGEKYQATTIYSLH 336 (340)
T ss_dssp ECEEE-SCTTTTTCGGGCC----CEECTTCEEEEEEEEEEE
T ss_pred EEECC-CCCCCCCCCCCCC----EEECCCCEEEEEEEEEEE
T ss_conf 99647-8998657778998----289998999889999999
No 4
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=0 Score=319.59 Aligned_cols=296 Identities=18% Similarity=0.206 Sum_probs=225.4
Q ss_pred CEEEEEEECCCEEEEEECCCCCEEEEEEECCCC---EEEEECCCCCCCCCHHCCCCCCCCEEECCCCCEECCCEEEECCE
Q ss_conf 868999987984999950148689999998898---59996358844330002763211347736886200886887997
Q T0609 16 EHKCIRFAAGGYEALIIPDVGGNVVELKDTNKG---VTILRTPKKDLKFEDFKNRPQVYGLPVLFPPNRIDDGTFKLGDK 92 (340)
Q Consensus 16 g~~~v~l~n~~~~~~i~p~~Ga~i~sl~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~G~pi~~p~~Ri~~g~f~~~g~ 92 (340)
.+..|+|+|+.++++|+ ++||+|++|+++.++ .++++.+ ...+.|...+.++|..++|+||||++|+|+++|+
T Consensus 20 ~v~~~tl~n~~l~v~i~-~~GA~i~~l~~~d~~G~~~~vvlg~---~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~ 95 (344)
T d1so0a_ 20 TVEKFQLQSDLLRVDII-SWGCTITALEVKDRQGRASDVVLGF---AELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGK 95 (344)
T ss_dssp EEEEEEEECSSCEEEEE-TBTTEEEEEEEECTTSCEEECBCCC---SSHHHHHSSCSCTTCEECSBCSEEGGGEEEETTE
T ss_pred EEEEEEEECCCEEEEEE-CCCCEEEEEEEECCCCCEEEEEECC---CCHHHHHHCCCCCCCEEECCCCEEECCEEEECCE
T ss_conf 89999998699999997-8690999999888899786649689---9989984078866878404788006997998999
Q ss_pred EEEECCCCCCCCCCCCCCC--CCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEE
Q ss_conf 8992356887766675665--77535999711367874899999967898621348845999999998041899999999
Q T0609 93 TYKFPINEAKNNNYIHGFI--KNSKWTVHKKKIDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSSKGLKQTTSVV 170 (340)
Q Consensus 93 ~y~l~~n~~~~~~~~HG~~--~~~~W~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~P~~~~~~~t~~l~~~~L~i~~~v~ 170 (340)
+|+|++|++. +++||+. +...|...+.. ..++++.+... +...+|||+++++++|+|.++.+.++++
T Consensus 96 ~y~l~~n~~~--~~~hg~~~~~~~~~~~~~~~----~~~v~~~~~~~---~~~~gfPg~~~~~vty~l~~~~~~~~~~-- 164 (344)
T d1so0a_ 96 EYHLAINKEP--NSLHGGVRGFDKVLWTPRVL----SNGVQFSRISP---DGEEGYPGELKVWVTYTLDGGELIVNYR-- 164 (344)
T ss_dssp EEECCCSBTT--BEETTSSSCGGGSBCEEEEE----TTEEEEEEEEC---TTGGGCCSCEEEEEEEEEETTEEEEEEE--
T ss_pred EEEECCCCCC--CCCCCCCCCCCEEEEEEECC----EEEEEEEEEEC---CCCCCCCCEEEEEEEEEECCCCEEEEEE--
T ss_conf 9972467787--65324789744578774023----00699999956---7668966047899999915883267883--
Q ss_pred ECCCHHHEECCCCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CC
Q ss_conf 48870310000136247604777763245058870341786277656677423778862333667743465-------53
Q T0609 171 NLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVAS-------HP 243 (340)
Q Consensus 171 N~~~~~~p~~~~~H~YF~~~~~~~~~~~~~~l~~~~~~~~~~d~~~lptg~~~~~~~~~~~~~~~~~~~~~-------~~ 243 (340)
|.+++++|+++++|+|||+++..+.++.+|+|++++.+++++|++.+|||+...+.+..+++.... .+.. ..
T Consensus 165 ~~s~~~tp~~lt~H~yfnl~~~~~~~i~~~~L~i~a~~~l~~d~~~iPtg~~~~~~~~~~df~~~~-~i~~~~~~~~~~~ 243 (344)
T d1so0a_ 165 AQASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPV-ELGKHLQDFHLNG 243 (344)
T ss_dssp EEESSCEECBCEECCCBCTTCTTCSCCTTCEEEECEEEECCBCTTSCBCSCCEECTTSTTCCSSCE-EHHHHHHHHTCCC
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHCCCC
T ss_conf 155766410000443231056655301121688425708988875675775234668841024741-0120012102440
Q ss_pred CCCEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEECCC--------------CCCCEEEEECCCCCCCCC
Q ss_conf 240120454234886632799971899839999985998868996488--------------668839994155888888
Q T0609 244 IESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDM--------------GDKKYACIEPQTSIINSP 309 (340)
Q Consensus 244 ~D~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~--------------g~~~~vciEP~t~~pda~ 309 (340)
.++.+... ........+++.++.+++++++.. .+|++++|++. +.+.+||||||++ |||+
T Consensus 244 ~~~~~~~~---~~~~~~~~a~l~~~~s~~~l~v~t--~~p~~~vYT~~~~~~~~~~~~g~~~~~~~giclEpq~~-pdA~ 317 (344)
T d1so0a_ 244 FDHNFCLK---GSKEKHFCARVHHAASGRVLEVYT--TQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNW-PDAV 317 (344)
T ss_dssp CEEEEEEC---CSSSCEEEEEEEETTTTEEEEEEE--SSSEEEEECCTTCCSCCBCGGGCBCCTTSCBEEEEESC-TTGG
T ss_pred EEEEEEEC---CCCCCCCEEEEECCCCCEEEEECC--CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCC-CCCC
T ss_conf 00015652---777763117999089981899769--99889998898778644377884658878999968889-8765
Q ss_pred CCCCCCCCCCCEEECCCCEEEEEEEEEE
Q ss_conf 8888776257689698977999999999
Q T0609 310 NVKLDRSVSGFKTLKPNESWSGVCKLYI 337 (340)
Q Consensus 310 n~~~~~~~~g~~~L~pGe~~~~~~~~~v 337 (340)
|++++++ ++|+|||+++.+++|.+
T Consensus 318 N~~~~~~----~iL~pge~y~~~t~y~F 341 (344)
T d1so0a_ 318 NQPRFPP----VLLRPGEEYDHTTWFKF 341 (344)
T ss_dssp GCTTSCC----CEECTTCCEEEEEEEEE
T ss_pred CCCCCCC----EEECCCCEEEEEEEEEE
T ss_conf 7889998----69999898989999999
No 5
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]}
Probab=100.00 E-value=2.3e-38 Score=238.42 Aligned_cols=244 Identities=17% Similarity=0.186 Sum_probs=170.6
Q ss_pred EEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCHHCCCCCCCCEEECCC-CCEECCCEEEE
Q ss_conf 35208868999987984999950148689999998898599963588443300027632113477368-86200886887
Q T0609 11 EIIWSEHKCIRFAAGGYEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFKNRPQVYGLPVLFP-PNRIDDGTFKL 89 (340)
Q Consensus 11 ~~~~~g~~~v~l~n~~~~~~i~p~~Ga~i~sl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~G~pi~~p-~~Ri~~g~f~~ 89 (340)
-+..|+..+|+|+|+.++|+|. .+||.|+||+.+..+.++||..+... .....+.|||+|+||| .|+.
T Consensus 15 ~~~~~~l~~i~i~~~~~~a~i~-~~Ga~l~s~~~~~~~~e~Lw~s~~a~---~~~~~~IRGGiPi~fP~fG~~------- 83 (269)
T d1jova_ 15 LVQHNDIPVLHLKHAVGTAKIS-LQGAQLISWKPQNAKQDVLWLSEVEP---FKNGNAIRGGVPICYPWFGGV------- 83 (269)
T ss_dssp EEEETTEEEEEEEETTEEEEEE-TBTTEEEEEEETTCSSCSBCBCTTCC---CCTTSCCSBSCCEEBSSCGGG-------
T ss_pred EECCCCCCEEEEECCCEEEEEE-CCCCEEEEEEECCCCCEEEEECCHHH---CCCCCCCCCCCCEECCCCCCC-------
T ss_conf 5131995489994898899998-99989999997999914898387454---367786348860307665999-------
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEE
Q ss_conf 99789923568877666756657753599971136787489999996789862134884599999999804189999999
Q T0609 90 GDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKKIDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSSKGLKQTTSV 169 (340)
Q Consensus 90 ~g~~y~l~~n~~~~~~~~HG~~~~~~W~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~P~~~~~~~t~~l~~~~L~i~~~v 169 (340)
.++.|||||++.|++.+.+++.. .+++++.+. .||+.|+++++|+|+ +++++
T Consensus 84 --------------~~p~HGFAR~~~w~l~~~~~~~~--~~~l~~~l~-------~~~~~f~~~~~~~lt-----l~~~l 135 (269)
T d1jova_ 84 --------------KQPAHGTARIRLWQLSHYYISVH--KVRLEFELF-------SDLNIIEAKVSMVFT-----DKCHL 135 (269)
T ss_dssp --------------SSSTTBSGGGSBCEEEEEEEETT--EEEEEEEEE-------CTTSCEEEEEEEEES-----SSEEE
T ss_pred --------------CCCCCCCCCCCCEEEEEEECCCC--EEEEEEEEC-------CCCCCCEEEEEEEEC-----CEEEE
T ss_conf --------------99988521366408987706775--089999731-------687721199999933-----17999
Q ss_pred EECCCHHHEECCCCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 94887031000013624760477776324505887034178627765667742377886233366774346553240120
Q T0609 170 VNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVASHPIESLFS 249 (340)
Q Consensus 170 ~N~~~~~~p~~~~~H~YF~~~~~~~~~~~~~~l~~~~~~~~~~d~~~lptg~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 249 (340)
+|.++.++||++|+||||+++......+.+. ....+ .+.. .. ... ..+.......+|.+|.
T Consensus 136 ~n~~~~~~pf~~g~HpyF~v~d~~~~~v~gl-----~~~~~-~~~~----~~--------~~~-~~~~~~~~~~~D~i~~ 196 (269)
T d1jova_ 136 TFTHYGEESAQAALHTYFNIGDINQVEVQGL-----PETCF-NSLN----QQ--------QEN-VPSPRHISENVDCIYS 196 (269)
T ss_dssp EEEECCSSCEEEEECCEEECSCGGGEEEESC-----CSEEE-ETTT----TE--------EEE-CCSSBCCSSCEEEEEE
T ss_pred EECCCCCCCCEECCCCEEECCCCCCEEEECC-----CCCCC-CCCC----CC--------CCC-CCCCCCCCCCEEEEEC
T ss_conf 9846997432020361374288221599668-----76330-1000----43--------300-5887246747449960
Q ss_pred CCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEECCCC----------CCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 4542348866327999718998399999859988689964886----------688399941558888888888776257
Q T0609 250 LKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMG----------DKKYACIEPQTSIINSPNVKLDRSVSG 319 (340)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~g----------~~~~vciEP~t~~pda~n~~~~~~~~g 319 (340)
... ..+++.++..+++|.+..+ +++++++|||+. +++||||||...
T Consensus 197 ~~~--------~~~~i~d~~~~~~i~v~~~-g~~~~vVWnP~~~~a~~~~d~~~~~fvCVEp~~~--------------- 252 (269)
T d1jova_ 197 AEN--------MQNQILDKSFNRTIALHHH-NASQFVLWNPWHKKTSGMSETGYQKMLCLETARI--------------- 252 (269)
T ss_dssp CSS--------SEEEEEETTTTEEEEEEEE-SCSEEEEEECTTSCCTTCCTTGGGGEEEEEEEEE---------------
T ss_pred CCC--------CCEEEEECCCCCEEEEEEE-CCCCEEEECCCCCHHCCCCCCCCCCEEEECCCCC---------------
T ss_conf 799--------8689996899988999981-8984899898500001064468878899791667---------------
Q ss_pred CEEECCCCEEEEEEEEE
Q ss_conf 68969897799999999
Q T0609 320 FKTLKPNESWSGVCKLY 336 (340)
Q Consensus 320 ~~~L~pGe~~~~~~~~~ 336 (340)
..+|+|||+|+.+++|.
T Consensus 253 ~~~L~PGes~~~~~~ir 269 (269)
T d1jova_ 253 HHLLEFGESLSVEISLK 269 (269)
T ss_dssp EEEECTTCEEEEEEEEC
T ss_pred CCEECCCCEEEEEEEEC
T ss_conf 76678998199999979
No 6
>d1k1xa2 b.30.5.8 (A:385-659) 4-alpha-glucanotransferase, C-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=96.86 E-value=0.0042 Score=33.88 Aligned_cols=148 Identities=16% Similarity=0.152 Sum_probs=79.9
Q ss_pred EEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCHHCCCCCCCC--------EE--------
Q ss_conf 35208868999987984999950148689999998898599963588443300027632113--------47--------
Q T0609 11 EIIWSEHKCIRFAAGGYEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFKNRPQVYG--------LP-------- 74 (340)
Q Consensus 11 ~~~~~g~~~v~l~n~~~~~~i~p~~Ga~i~sl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~G--------~p-------- 74 (340)
.+.+.|.+-|.|+|+.+-+.+.|..||.|..|..+.....++..- ....+.|.......+ +.
T Consensus 8 DfD~DG~~Ev~l~~~~~~~~~~p~~GG~l~Eld~k~~~~Nl~dTL--~Rr~E~YH~~~~~~~~~~~~~egi~siHe~~~~ 85 (275)
T d1k1xa2 8 DVDFDGRAEIMVENDGFIATIKPHYGGSIFELSSKRKAVNYNDVL--PRRWEHYHEVPEATKPEKESEEGIASIHELGKQ 85 (275)
T ss_dssp CSSSSSSCEEEEECSSEEEEEETTTTTEEEEEEETTTTEETTCCC--CCCCCTTCC-----------------------C
T ss_pred CCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCCCCHHHHH--CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCC
T ss_conf 567899611799768689999107798799981255334556742--035312113442388633576676678895012
Q ss_pred -------ECCCCCEECCCEEEECCEEEEECCCCC-----CCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCC
Q ss_conf -------736886200886887997899235688-----77666756657753599971136787489999996789862
Q T0609 75 -------VLFPPNRIDDGTFKLGDKTYKFPINEA-----KNNNYIHGFIKNSKWTVHKKKIDQDKALVEVVFDFTKENEA 142 (340)
Q Consensus 75 -------i~~p~~Ri~~g~f~~~g~~y~l~~n~~-----~~~~~~HG~~~~~~W~v~~~~~~~~~~~v~~~~~~~~~~~~ 142 (340)
.+.| ..-....| -..- +++... .....-.|-..+.+.++.... ..|+++..-. .
T Consensus 86 k~e~l~~~L~y-D~~~R~s~--iDHf--~~~~~tle~~~~~~~~E~gDF~~~~y~~~~~~-----~~v~l~r~G~----v 151 (275)
T d1k1xa2 86 IPEEIRRELAY-DWQLRAIL--QDHF--IKPEETLDNYRLVKYHELGDFVNQPYEYEMIE-----NGVKLWREGG----V 151 (275)
T ss_dssp CCHHHHTTCCC-CSSCCCEE--EEEE--ECTTCCHHHHHTTCSCCCBSCSSSCCEEEEET-----TEEEEEEEEE----E
T ss_pred CCCCHHHHCCC-CCCCCCEE--EEEE--CCCCCCHHHHHCCCCCCCCCCCCCCEEEEECC-----CCEEEEEECC----C
T ss_conf 33002644366-65357545--8872--37887888875478300156557735744226-----7389999786----3
Q ss_pred CCCCCEEEEEEEEEEEECCEEEEEEEEEECCC
Q ss_conf 13488459999999980418999999994887
Q T0609 143 YKYFSHEFQFKLSYELSSKGLKQTTSVVNLSS 174 (340)
Q Consensus 143 ~~~~P~~~~~~~t~~l~~~~L~i~~~v~N~~~ 174 (340)
+..-..++.++..|+|+.++++++|++.+.++
T Consensus 152 ~~~~~~p~~l~K~~~l~~~~~~v~y~~~~e~~ 183 (275)
T d1k1xa2 152 YAEEKIPARVEKKIELTEDGFIAKYRVLLEKP 183 (275)
T ss_dssp ESSSEEEEEEEEEEEEETTEEEEEEEEEESSC
T ss_pred CCCCCCCEEEEEEEEECCCCEEEEEEEECCCC
T ss_conf 13563565999999981782699999934898
No 7
>d1ejxb_ b.85.3.1 (B:) Urease, beta-subunit {Klebsiella aerogenes [TaxId: 28451]}
Probab=62.85 E-value=2.6 Score=17.69 Aligned_cols=30 Identities=23% Similarity=0.270 Sum_probs=21.6
Q ss_pred EEEECCEEEEEEEEEECCCHHHEECCCCCCEE
Q ss_conf 99804189999999948870310000136247
Q T0609 156 YELSSKGLKQTTSVVNLSSEEMPLSVGYHSAF 187 (340)
Q Consensus 156 ~~l~~~~L~i~~~v~N~~~~~~p~~~~~H~YF 187 (340)
+.|....-+++++|+|+||+|. +.+-|--|
T Consensus 13 I~lN~gr~~~~l~V~NtGDRpI--QVGSH~HF 42 (101)
T d1ejxb_ 13 IALNTGRATCRVVVENHGDRPI--QVGSHYHF 42 (101)
T ss_dssp EECSTTCCEEEEEEEECSSSCE--EEETTSCG
T ss_pred EEECCCCCEEEEEEEECCCCCE--EECCCCCH
T ss_conf 8876999679999874788623--66162475
No 8
>d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]}
Probab=57.16 E-value=2.9 Score=17.38 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=21.2
Q ss_pred EEEECCEEEEEEEEEECCCHHHEECCCCCCEE
Q ss_conf 99804189999999948870310000136247
Q T0609 156 YELSSKGLKQTTSVVNLSSEEMPLSVGYHSAF 187 (340)
Q Consensus 156 ~~l~~~~L~i~~~v~N~~~~~~p~~~~~H~YF 187 (340)
+.|....-+++++|+|+||+|. +.+-|--|
T Consensus 15 I~lN~gr~~~~l~V~NtGDRpI--QVGSH~HF 44 (122)
T d4ubpb_ 15 IEINAGREKTTIRVSNTGDRPI--QVGSHIHF 44 (122)
T ss_dssp EETTTTSCEEEEEEEECSSSCE--EEETTSCG
T ss_pred EEECCCCCEEEEEEEECCCCCE--EECCCCCH
T ss_conf 8865999778999874798632--55263573
No 9
>d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]} SCOP: d1e9ya1 d1ejxb_
Probab=48.18 E-value=5 Score=16.04 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=21.1
Q ss_pred EEEECCEEEEEEEEEECCCHHHEECCCCCCEE
Q ss_conf 99804189999999948870310000136247
Q T0609 156 YELSSKGLKQTTSVVNLSSEEMPLSVGYHSAF 187 (340)
Q Consensus 156 ~~l~~~~L~i~~~v~N~~~~~~p~~~~~H~YF 187 (340)
+.|....=+++++|+|+||+|. +.+-|--|
T Consensus 15 I~lN~gr~~~~l~V~NtGDRpI--QVGSHyHF 44 (122)
T d4ubpb_ 15 IEINAGREKTTIRVSNTGDRPI--QVGSHIHF 44 (122)
T ss_dssp EETTTTSCEEEEEEEECSSSCE--EEETTSCG
T ss_pred EEECCCCCEEEEEEEECCCCCE--EECCEECH
T ss_conf 7866999668998864688532--32531057
No 10
>d1e9ya1 b.85.3.1 (A:106-238) Urease, beta-subunit {Helicobacter pylori [TaxId: 210]}
Probab=46.38 E-value=3.5 Score=16.93 Aligned_cols=30 Identities=17% Similarity=0.286 Sum_probs=21.0
Q ss_pred EEEECCEEEEEEEEEECCCHHHEECCCCCCEE
Q ss_conf 99804189999999948870310000136247
Q T0609 156 YELSSKGLKQTTSVVNLSSEEMPLSVGYHSAF 187 (340)
Q Consensus 156 ~~l~~~~L~i~~~v~N~~~~~~p~~~~~H~YF 187 (340)
+.|....-+++++|+|+||+|. +.+-|--|
T Consensus 13 I~lN~gr~~~~l~V~NtGDRpI--QVGSH~HF 42 (133)
T d1e9ya1 13 ITINEGKKAVSVKVKNVGDRPV--QIGSHFHF 42 (133)
T ss_dssp EETTTTCCCCEEEEEECSSSCE--EEETTSCG
T ss_pred EEECCCCCEEEEEEEECCCCCE--EECCCCCH
T ss_conf 8866999679999873788632--55263574
No 11
>d1jz8a4 b.30.5.1 (A:731-1023) beta-Galactosidase, domain 5 {Escherichia coli [TaxId: 562]} SCOP: d1px4a4
Probab=28.92 E-value=14 Score=13.50 Aligned_cols=35 Identities=11% Similarity=-0.073 Sum_probs=25.4
Q ss_pred EEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEC
Q ss_conf 68999987984999950148689999998898599963
Q T0609 17 HKCIRFAAGGYEALIIPDVGGNVVELKDTNKGVTILRT 54 (340)
Q Consensus 17 ~~~v~l~n~~~~~~i~p~~Ga~i~sl~~~~~~~~~l~~ 54 (340)
-..+++++++.++++-. .=|.|+|+.. +|.++|..
T Consensus 14 ~~~i~I~~~~~~~~Fdk-~tG~l~s~~~--~g~~ll~~ 48 (293)
T d1jz8a4 14 EMDFCIELGNKRWQFNR-QSGFLSQMWI--GDKKQLLT 48 (293)
T ss_dssp SSEEEEEETTEEEEEET-TTCSEEEEEE--TTEECEEE
T ss_pred CCEEEEEECCEEEEEEC-CCCEEEEEEE--CCCHHHHC
T ss_conf 85899983888999986-5554999998--89733311
No 12
>d1ibxa_ d.15.2.1 (A:) Caspase-activated DNase (CAD), DFF40, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.57 E-value=8.8 Score=14.62 Aligned_cols=23 Identities=13% Similarity=0.455 Sum_probs=16.7
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEE
Q ss_conf 88399941558888888888776257689698977999
Q T0609 294 KKYACIEPQTSIINSPNVKLDRSVSGFKTLKPNESWSG 331 (340)
Q Consensus 294 ~~~vciEP~t~~pda~n~~~~~~~~g~~~L~pGe~~~~ 331 (340)
..|-|++++| -++.|.|||+|++
T Consensus 58 eYF~tLp~nT---------------~lm~L~~ge~W~g 80 (81)
T d1ibxa_ 58 DYFPSVPDNA---------------ELVLLTLGQAWQG 80 (81)
T ss_dssp SSCSSCCSCC---------------CEEEECSSSCCCC
T ss_pred HHHHCCCCCC---------------EEEEECCCCCCCC
T ss_conf 9983378896---------------9999779993678
No 13
>d1c9fa_ d.15.2.1 (A:) Caspase-activated DNase (CAD), DFF40, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} SCOP: d1ibxa_
Probab=23.79 E-value=8.5 Score=14.72 Aligned_cols=24 Identities=17% Similarity=0.434 Sum_probs=16.7
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEE
Q ss_conf 883999415588888888887762576896989779999
Q T0609 294 KKYACIEPQTSIINSPNVKLDRSVSGFKTLKPNESWSGV 332 (340)
Q Consensus 294 ~~~vciEP~t~~pda~n~~~~~~~~g~~~L~pGe~~~~~ 332 (340)
..|-|+++.| -+..|.|||+|.+.
T Consensus 61 eyF~tL~~nT---------------~lm~L~~Gq~W~g~ 84 (87)
T d1c9fa_ 61 DCFPGLPNDA---------------ELLLLTAGETWHGY 84 (87)
T ss_dssp TSCSSCCTTE---------------EEEEECTTCCCCCS
T ss_pred HHHCCCCCCC---------------EEEEECCCCCCCCC
T ss_conf 6732687885---------------89896489941551
No 14
>d1c9fa_ d.15.2.1 (A:) Caspase-activated DNase (CAD), DFF40, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.57 E-value=8.6 Score=14.68 Aligned_cols=23 Identities=17% Similarity=0.469 Sum_probs=16.7
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEE
Q ss_conf 88399941558888888888776257689698977999
Q T0609 294 KKYACIEPQTSIINSPNVKLDRSVSGFKTLKPNESWSG 331 (340)
Q Consensus 294 ~~~vciEP~t~~pda~n~~~~~~~~g~~~L~pGe~~~~ 331 (340)
..|-|++++| -+..|.|||+|++
T Consensus 61 eYF~tLp~nT---------------~lm~L~~gq~W~g 83 (87)
T d1c9fa_ 61 DCFPGLPNDA---------------ELLLLTAGETWHG 83 (87)
T ss_dssp TSCSSCCTTE---------------EEEEECTTCCCCC
T ss_pred HHHHCCCCCC---------------EEEEECCCCCCCC
T ss_conf 8982488897---------------9999779983477
No 15
>d1so9a_ b.146.1.1 (A:) Cytochrome C oxidase assembly protein CtaG {Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]}
Probab=20.69 E-value=15 Score=13.22 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=27.0
Q ss_pred EEEEEEEECCCCCCCCCCCEEEEE---EEEEEEECCEEEEEEEEEECCCHHHE
Q ss_conf 899999967898621348845999---99999804189999999948870310
Q T0609 129 LVEVVFDFTKENEAYKYFSHEFQF---KLSYELSSKGLKQTTSVVNLSSEEMP 178 (340)
Q Consensus 129 ~v~~~~~~~~~~~~~~~~P~~~~~---~~t~~l~~~~L~i~~~v~N~~~~~~p 178 (340)
.|+++|...-++ +.|+.|.- .+++.. |..-.+.|.++|++++++.
T Consensus 12 ~I~V~F~a~v~~----~lpW~F~P~~~~i~V~p-Ge~~~v~y~a~N~s~~~~~ 59 (131)
T d1so9a_ 12 KIKVTFDANVAA----GLPWEFVPVQRDIDVRI-GETVQIMYRAKNLASTPTT 59 (131)
T ss_dssp CEEEEEEEEECT----TSCEEEECSCSEEEECT-TCCCCEEEEEEECSSSCEE
T ss_pred EEEEEEEEECCC----CCCEEEEECCCEEEEEE-CCEEEEEEEEEECCCCEEE
T ss_conf 799998743388----99768880695799862-9868999999828996089
Done!