Query T0614 Sin1, Homo Sapiens, 135 residues
Match_columns 135
No_of_seqs 67 out of 69
Neff 4.4
Searched_HMMs 22458
Date Mon Jul 5 08:58:44 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0614.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0614.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cy5_A Epidermal growth factor 75.1 4.4 0.0002 20.1 10.1 82 19-109 48-131 (140)
2 1mai_A Phospholipase C delta-1 72.3 5.2 0.00023 19.7 11.1 87 19-114 28-126 (131)
3 1unq_A RAC-alpha serine/threon 60.4 8.9 0.0004 18.2 6.2 53 59-111 59-112 (125)
4 1wvh_A Tensin, tensin1; beta s 45.3 16 0.0007 16.8 9.0 82 19-108 39-133 (134)
5 1ntv_A Disabled homolog 1; bet 44.8 16 0.00071 16.7 8.3 81 19-112 60-140 (152)
6 3dxe_A Amyloid beta A4 protein 40.2 19 0.00084 16.3 8.3 78 19-110 45-123 (140)
7 3kb2_A SPBC2 prophage-derived 33.1 22 0.00098 15.8 2.6 29 84-112 140-168 (173)
8 1p3r_A Disabled homolog 2; PTB 32.2 25 0.0011 15.5 7.7 83 19-114 59-141 (160)
9 2fjl_A 1-phosphatidylinositol- 30.8 27 0.0012 15.4 4.2 50 58-108 94-147 (150)
10 2ej8_A DCC-interacting protein 29.6 28 0.0012 15.2 8.4 82 18-112 55-143 (160)
11 1pfj_A TFIIH basal transcripti 29.5 28 0.0012 15.2 8.7 86 11-109 10-101 (108)
12 2ela_A Adapter protein contain 28.9 29 0.0013 15.1 8.1 81 18-111 68-155 (175)
13 2e6z_A Transcription elongatio 24.5 35 0.0015 14.7 2.9 33 19-59 24-56 (59)
14 3hqc_A Tensin-like C1 domain-c 22.1 39 0.0017 14.4 8.1 83 19-109 51-145 (157)
15 3f0w_A NUMB-R, NUMB-like prote 21.9 39 0.0017 14.3 8.8 79 19-109 77-157 (168)
No 1
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=75.06 E-value=4.4 Score=20.09 Aligned_cols=82 Identities=15% Similarity=0.175 Sum_probs=58.4
Q ss_pred CEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEECCC--CCEEEEEECCHHH
Q ss_conf 12268875373899735878755531321677013232310344431235888517999985188--6058875178789
Q T0614 19 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNH--DYKHLYFESDAAT 96 (135)
Q Consensus 19 k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~r~~~~~~~Fkiv~~~~~--~~KrYDFEA~~~~ 96 (135)
.++..|.|+-+.|.+.-++++. --.++++..|..|.........+..|-++...+. .+--|=|..+...
T Consensus 48 ~~~v~L~Vs~~gi~l~d~~t~~---------~l~~~~l~~Is~c~~~~~~~~~~~ifafi~~~~~~~~~~CHvF~C~~~~ 118 (140)
T 2cy5_A 48 AQEMLLRVSPSQVTLLDPVSKE---------ELESYPLDAIVRCDAVMPRGRSRSLLLLVCQEPERAQPDVHFFQGLLLG 118 (140)
T ss_dssp CEEEEEEECSSEEEEECTTTCC---------EEEEEEGGGEEEEEEECCSSCSSCEEEEEECCTTCSSCEEEEEEECTTH
T ss_pred CCEEEEEECCCCCEEECCCCCC---------EEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCC
T ss_conf 8539999828932898488871---------5210532379998102898864307999933789885589999906512
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999888876
Q T0614 97 VNEIVLKVNYILE 109 (135)
Q Consensus 97 A~EIV~kIn~ILe 109 (135)
|++|..-|+-.++
T Consensus 119 A~~I~~~i~~Af~ 131 (140)
T 2cy5_A 119 AELIREDIQGALQ 131 (140)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 2
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=72.30 E-value=5.2 Score=19.68 Aligned_cols=87 Identities=8% Similarity=0.104 Sum_probs=53.5
Q ss_pred CEEEEEEEC--CCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEEC---------CCCCCCCEEEEEEECCCCCEE
Q ss_conf 122688753--738997358787555313216770132323103444312---------358885179999851886058
Q T0614 19 TTDVQLGIS--GDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAE---------EKSPSHAIFKLTYLSNHDYKH 87 (135)
Q Consensus 19 k~Er~L~ID--GdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~---------r~~~~~~~Fkiv~~~~~~~Kr 87 (135)
...|.+-+| +..|+--+...++ ..+..++++++|.....-. ...+...-|.|++. +..+.
T Consensus 28 ~~~R~f~ls~d~~~i~~~~~~~~~-------~~~~~~i~i~~I~~V~~G~~t~~f~~~~~~~~~~~~Fsiv~~--~~~rt 98 (131)
T 1mai_A 28 RRERFYKLQEDCKTIWQESRKVMR-------SPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFK--DQRNT 98 (131)
T ss_dssp EEEEEEEECTTSSEEEECCCCTTC-------CTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEES--SSCCC
T ss_pred CEEEEEEECCCCCEEEECCCCCCC-------CCCCCEEEHHHCEEEECCCCCHHHHHHCCCCCCCCEEEEEEC--CCCCE
T ss_conf 888999991898989965888877-------765518988988577158888678761346884537999985--89837
Q ss_pred EEEECC-HHHHHHHHHHHHHHHHHCCCH
Q ss_conf 875178-789999999988887611552
Q T0614 88 LYFESD-AATVNEIVLKVNYILESRAST 114 (135)
Q Consensus 88 YDFEA~-~~~A~EIV~kIn~ILe~R~s~ 114 (135)
.||.|. ..+|+.-|.-|+++|+-..+.
T Consensus 99 LdL~a~~~~~~~~Wv~gL~~Ll~~~~~~ 126 (131)
T 1mai_A 99 LDLIAPSPADAQHWVQGLRKIIHHSGSM 126 (131)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHC-----
T ss_pred EEEEECCHHHHHHHHHHHHHHHHCCCCH
T ss_conf 9999899999999999999998223230
No 3
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 1p6s_A
Probab=60.36 E-value=8.9 Score=18.24 Aligned_cols=53 Identities=13% Similarity=0.245 Sum_probs=37.7
Q ss_pred EEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECC-HHHHHHHHHHHHHHHHHC
Q ss_conf 03444312358885179999851886058875178-789999999988887611
Q T0614 59 LCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESD-AATVNEIVLKVNYILESR 111 (135)
Q Consensus 59 Vv~ckiv~r~~~~~~~Fkiv~~~~~~~KrYDFEA~-~~~A~EIV~kIn~ILe~R 111 (135)
|+.|..+....+.+..|.|.....+....|.|.|+ ..++.+=|.-|+.++...
T Consensus 59 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~f~a~s~~e~~~Wv~ai~~~~~~~ 112 (125)
T 1unq_A 59 VAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGL 112 (125)
T ss_dssp CTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 602210014324772399995476662059999099999999999999999986
No 4
>1wvh_A Tensin, tensin1; beta sandwich, cell adhesion; 1.50A {Gallus gallus} SCOP: b.55.1.2 PDB: 2gjy_A
Probab=45.26 E-value=16 Score=16.75 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=52.8
Q ss_pred CEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEEC--------CCCCCCCEEEEEEECCCCCE---E
Q ss_conf 122688753738997358787555313216770132323103444312--------35888517999985188605---8
Q T0614 19 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAE--------EKSPSHAIFKLTYLSNHDYK---H 87 (135)
Q Consensus 19 k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~--------r~~~~~~~Fkiv~~~~~~~K---r 87 (135)
.++++|.|+.+=|.++..++++ .-...+++..|..|-.-. .....+..|-.+.......+ =
T Consensus 39 ~~~V~l~Vs~~GI~v~d~~~~~--------~~~~~~pi~~Isfca~d~~d~~~~~~~~~~~~~~FafI~r~~~~~~~~~C 110 (134)
T 1wvh_A 39 ATIVHFKVSAQGITLTDNQRKL--------FFRRHYPLNTVTFCDLDPQERKWTKTDGSGPAKLFGFVARKQGSTTDNVC 110 (134)
T ss_dssp CEEEEEEEETTEEEEEESSSCS--------SCEEEEEGGGEEEEEECTTCCEEECSSSSCEEEEEEEEECC-CCTTCEEE
T ss_pred CEEEEEEECCCEEEEEECCCCC--------EEEEEECCCCEEEEEEECCCCEEECCCCCCCCCEEEEECCCCCCCCCEEE
T ss_conf 8499999767858999778885--------68887326858899874444155125777667488887168888857699
Q ss_pred EEEEC-CHH-HHHHHHHHHHHHH
Q ss_conf 87517-878-9999999988887
Q T0614 88 LYFES-DAA-TVNEIVLKVNYIL 108 (135)
Q Consensus 88 YDFEA-~~~-~A~EIV~kIn~IL 108 (135)
|=|-. ++. .|++||+=||-+|
T Consensus 111 HVF~~~~~~~~a~~iv~~i~~~~ 133 (134)
T 1wvh_A 111 HLFAELDPDQPAAAIVNFVSRVM 133 (134)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEECCCCCCCHHHHHHHHHHHHC
T ss_conf 98715670358999999877550
No 5
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=44.84 E-value=16 Score=16.71 Aligned_cols=81 Identities=9% Similarity=0.060 Sum_probs=56.2
Q ss_pred CEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCHHHHH
Q ss_conf 12268875373899735878755531321677013232310344431235888517999985188605887517878999
Q T0614 19 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVN 98 (135)
Q Consensus 19 k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~r~~~~~~~Fkiv~~~~~~~KrYDFEA~~~~A~ 98 (135)
...+.|.|+.+-|.|..++++. --..+++..|..|-. + +.++..|-.+.....-.-=|=|.++ ..|.
T Consensus 60 ~~~V~L~Vs~~gi~v~d~~t~~---------~i~~~~i~~ISfc~~-d--~~~~~~FafI~~~~~~~~c~~f~~~-~~A~ 126 (152)
T 1ntv_A 60 KQKIFLTISFGGIKIFDEKTGA---------LQHHHAVHEISYIAK-D--ITDHRAFGYVCGKEGNHRFVAIKTA-QAAE 126 (152)
T ss_dssp CEEEEEEEETTEEEEEETTTCC---------EEEEECGGGEEEEEE-C--TTCTTEEEEEESSTTCCEEEEEEES-SCSH
T ss_pred CCEEEEEEECCEEEEECCCCCE---------EEEEEEHHHEEEEEE-C--CCCCEEEEEEECCCCCEEEEEEEEH-HHHH
T ss_conf 8569999963669998277674---------899984334689961-7--8878268999638984699999636-6699
Q ss_pred HHHHHHHHHHHHCC
Q ss_conf 99999888876115
Q T0614 99 EIVLKVNYILESRA 112 (135)
Q Consensus 99 EIV~kIn~ILe~R~ 112 (135)
+|..-|....++..
T Consensus 127 ~I~~~i~~AF~~a~ 140 (152)
T 1ntv_A 127 PVILDLRDLFQLIY 140 (152)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 6
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} PDB: 3dxd_A 3dxc_A
Probab=40.19 E-value=19 Score=16.27 Aligned_cols=78 Identities=8% Similarity=-0.013 Sum_probs=55.5
Q ss_pred CEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEE-CCCCCEEEEEECCHHHH
Q ss_conf 12268875373899735878755531321677013232310344431235888517999985-18860588751787899
Q T0614 19 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYL-SNHDYKHLYFESDAATV 97 (135)
Q Consensus 19 k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~r~~~~~~~Fkiv~~-~~~~~KrYDFEA~~~~A 97 (135)
...+.|.|+.+.|.|...+++ ..-..+++..|..|- +.+ ++..|-.+.. ...++.=|=|..++. |
T Consensus 45 ~~~V~L~Vs~~gi~v~d~~~~---------~~i~~~~i~~Isf~~-~d~---~~~~Fa~I~~~~~~~~~CHvF~c~~~-A 110 (140)
T 3dxe_A 45 WTPSHVSVAPATLTILHQQTE---------AVLGECRVRFLSFLA-VGR---DVHTFAFIMAAGPASFCCHMFWCEPN-A 110 (140)
T ss_dssp CEEEEEEECSSEEEEEETTTC---------CEEEEEEGGGEEEEE-ECS---STTEEEEEEEEETTEEEEEEEEEESC-S
T ss_pred CCEEEEEEECCEEEEEECCCC---------EEEEEEECCEEEEEE-ECC---CCCEEEEEEECCCCCEEEEEEECCCC-H
T ss_conf 857999980787999988998---------699999757899999-889---98789999817999889999996835-8
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999998888761
Q T0614 98 NEIVLKVNYILES 110 (135)
Q Consensus 98 ~EIV~kIn~ILe~ 110 (135)
.+|..-|+..-++
T Consensus 111 ~~i~~ai~~Af~l 123 (140)
T 3dxe_A 111 ASLSEAVQAACML 123 (140)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 7
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} PDB: 2axp_A*
Probab=33.12 E-value=22 Score=15.84 Aligned_cols=29 Identities=10% Similarity=0.260 Sum_probs=23.4
Q ss_pred CCEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 60588751787899999999888876115
Q T0614 84 DYKHLYFESDAATVNEIVLKVNYILESRA 112 (135)
Q Consensus 84 ~~KrYDFEA~~~~A~EIV~kIn~ILe~R~ 112 (135)
....|..++.....+||+.+|-.+||+.-
T Consensus 140 ~~~~~~idt~~~s~eei~~~Il~l~e~~~ 168 (173)
T 3kb2_A 140 GLHTYSWDTGQWSSDEIAKDIIFLVELEH 168 (173)
T ss_dssp SSCEEEEETTTSCHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf 87469998999999999999999983400
No 8
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=32.17 E-value=25 Score=15.49 Aligned_cols=83 Identities=6% Similarity=0.045 Sum_probs=58.5
Q ss_pred CEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCHHHHH
Q ss_conf 12268875373899735878755531321677013232310344431235888517999985188605887517878999
Q T0614 19 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVN 98 (135)
Q Consensus 19 k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~r~~~~~~~Fkiv~~~~~~~KrYDFEA~~~~A~ 98 (135)
...+.|.|+.+-|.|.-.+++. --..+++..|..|- .+ +.++..|-.+........=|=|+.. ..|.
T Consensus 59 ~~~V~L~Vs~~Gi~v~d~~t~~---------~i~~~~i~~ISf~~-~d--~~~~~~FafI~~~~~~~~Chvf~~~-~~A~ 125 (160)
T 1p3r_A 59 KQRIWVNISLSGIKIIDEKTGV---------IEHEHPVNKISFIA-RD--VTDNRAFGYVCGGEGQHQFFAIKTG-QQAE 125 (160)
T ss_dssp CEEEEEEEETTEEEEEETTTCC---------EEEEECGGGEEEEE-EC--TTCTTEEEEEESSTTCEEEEEEEES-SCSH
T ss_pred CCEEEEEEECCEEEEECCCCCC---------EEEEEEHHEEEEEE-EC--CCCCEEEEEECCCCCCEEEEEEEEC-HHHH
T ss_conf 8669999955768998376681---------68997622389999-76--9987588753378982799999702-4899
Q ss_pred HHHHHHHHHHHHCCCH
Q ss_conf 9999988887611552
Q T0614 99 EIVLKVNYILESRAST 114 (135)
Q Consensus 99 EIV~kIn~ILe~R~s~ 114 (135)
+|..-|....++....
T Consensus 126 ~i~~~i~~AF~~a~~~ 141 (160)
T 1p3r_A 126 PLVVDLKDLFQVIYNV 141 (160)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999999
No 9
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=30.84 E-value=27 Score=15.35 Aligned_cols=50 Identities=20% Similarity=0.242 Sum_probs=33.9
Q ss_pred CEEEEEEECC---CCCCCCEEEEEEECCCCCEEEEEECCHH-HHHHHHHHHHHHH
Q ss_conf 1034443123---5888517999985188605887517878-9999999988887
Q T0614 58 LLCACDLAEE---KSPSHAIFKLTYLSNHDYKHLYFESDAA-TVNEIVLKVNYIL 108 (135)
Q Consensus 58 ~Vv~ckiv~r---~~~~~~~Fkiv~~~~~~~KrYDFEA~~~-~A~EIV~kIn~IL 108 (135)
+|-+|-|..+ +++.+.+|+|...+ ....-.||-|++. +..|=+.+|.-|-
T Consensus 94 dV~~C~I~~~~~~~~~k~~vf~i~~~~-~~~~~levAa~s~Eel~eW~~~Irea~ 147 (150)
T 2fjl_A 94 DVPACQIAIRPEGKNNRLFVFSISMPS-VAQWSLDVAADSQEELQDWVKKIREVA 147 (150)
T ss_dssp CSTTCEEEEETTCSSSCSCEEEEECTT-TSSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEECCCCCCEEEEEECCCC-CCCCCEEEEECCHHHHHHHHHHHHHHH
T ss_conf 820338998005799824899975798-888446765042999999999999998
No 10
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=29.55 E-value=28 Score=15.22 Aligned_cols=82 Identities=12% Similarity=0.094 Sum_probs=55.1
Q ss_pred CCEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEECCC-------CCEEEEE
Q ss_conf 412268875373899735878755531321677013232310344431235888517999985188-------6058875
Q T0614 18 FTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNH-------DYKHLYF 90 (135)
Q Consensus 18 ~k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~r~~~~~~~Fkiv~~~~~-------~~KrYDF 90 (135)
....+.|-|+.+-|.+.-++++. --..+++..|..|-.- +.++..|-.+..... .+.=|=|
T Consensus 55 ~~~~V~L~Vs~~gi~v~d~~t~~---------~l~~~~i~~ISfc~~d---~~~~~~FafI~~~~~~~~~~~~~~~CHVF 122 (160)
T 2ej8_A 55 RMTESHLLVTCDCLKLIDPQTQV---------TRLTFPLPCVVLYATH---QENKRLFGFVLRTSSGRSESNLSSVCYIF 122 (160)
T ss_dssp CCCEEEEEEESSEEEEECTTTCC---------EEEEEEGGGEEEEEEE---TTEEEEEEEEEEECC------CEEEEEEE
T ss_pred CCCEEEEEEECCEEEEEECCCCE---------EEEEEEHHHEEEEEEC---CCCCEEEEEEEECCCCCCCCCCCEEEEEE
T ss_conf 88489999967979999589983---------9999753527899745---88875899997056656667621699999
Q ss_pred ECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 1787899999999888876115
Q T0614 91 ESDAATVNEIVLKVNYILESRA 112 (135)
Q Consensus 91 EA~~~~A~EIV~kIn~ILe~R~ 112 (135)
+++. .|.+|..-|.-..++..
T Consensus 123 ~~~~-~A~~I~~ai~~AF~~a~ 143 (160)
T 2ej8_A 123 ESNN-EGEKICDSVGLAKQIAL 143 (160)
T ss_dssp EESS-CHHHHHHHHHHHHHHHH
T ss_pred EECH-HHHHHHHHHHHHHHHHH
T ss_conf 9552-59999999999999999
No 11
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=29.54 E-value=28 Score=15.22 Aligned_cols=86 Identities=13% Similarity=0.152 Sum_probs=59.1
Q ss_pred EEECCCCC-CEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEE
Q ss_conf 97236564-12268875373899735878755531321677013232310344431235888517999985188605887
Q T0614 11 SMIHRLRF-TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLY 89 (135)
Q Consensus 11 ~r~~k~~~-k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~r~~~~~~~Fkiv~~~~~~~KrYD 89 (135)
.+....++ |.+=+|.+..|+|.=+|.. . ..-+.++++.+|-.-.++.-.+ ..-..+|+...+ .-|-
T Consensus 10 ~~v~~v~yKK~~GtL~l~~d~l~W~p~~--~-------~~~~v~v~~~~I~~~q~Spe~s-~Kv~Lkiv~k~~---~s~~ 76 (108)
T 1pfj_A 10 LIVKKVRQKKQDGALYLMAERIAWAPEG--K-------DRFTISHMYADIKCQKISPEGK-AKIQLQLVLHAG---DTTN 76 (108)
T ss_dssp EEESCCBCSSCBCEEEEETTEEEEECSS--S-------SSCSEEEETTTCCCEEECCSSS-SSCEEEEECSSS---CEEE
T ss_pred EEECEEEEECCCCEEEEECCEEEEECCC--C-------CCCEEEEEHHHHHCEECCCCCC-CCHHEEEEECCC---CEEE
T ss_conf 2111058854784899975837996189--9-------9855899944501231399987-401067786279---8069
Q ss_pred EEC-CH----HHHHHHHHHHHHHHH
Q ss_conf 517-87----899999999888876
Q T0614 90 FES-DA----ATVNEIVLKVNYILE 109 (135)
Q Consensus 90 FEA-~~----~~A~EIV~kIn~ILe 109 (135)
|+= ++ +++..|=..|+.||.
T Consensus 77 F~Ftn~~~~~~erd~iK~~Lq~~i~ 101 (108)
T 1pfj_A 77 FHFSNESTAVKERDAVKDLLQQLLP 101 (108)
T ss_dssp EECCCSSCTTHHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9976910778889999999999999
No 12
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=28.89 E-value=29 Score=15.15 Aligned_cols=81 Identities=12% Similarity=0.101 Sum_probs=54.4
Q ss_pred CCEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEECCC-------CCEEEEE
Q ss_conf 412268875373899735878755531321677013232310344431235888517999985188-------6058875
Q T0614 18 FTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNH-------DYKHLYF 90 (135)
Q Consensus 18 ~k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~r~~~~~~~Fkiv~~~~~-------~~KrYDF 90 (135)
.++.+.|.|+.+-|.+.-++++ .--..+++..|..|-.- +.++..|-.+..... .+.=|=|
T Consensus 68 k~~~V~L~Is~~gI~l~d~~t~---------~~l~~~pi~~ISfc~~d---~~~~~~FafI~~~~~~~~~~~~~~~CHVF 135 (175)
T 2ela_A 68 RMTESHLLVTCDCLKLIDPQTQ---------VTRLTFPLPCVVLYATH---QENKRLFGFVLRTSSGRSESNLSSVCYIF 135 (175)
T ss_dssp CCEEEEEEECSSEEEEECTTTC---------CEEEEEEGGGEEEEEEE---TTEEEEEEEEEEEC-------CEEEEEEE
T ss_pred CCCEEEEEEECCEEEEEECCCC---------EEEEEECHHHEEEEEEC---CCCCEEEEEEEECCCCCCCCCCEEEEEEE
T ss_conf 7828999997677999947998---------28999603765899636---98876899998045557677720899999
Q ss_pred ECCHHHHHHHHHHHHHHHHHC
Q ss_conf 178789999999988887611
Q T0614 91 ESDAATVNEIVLKVNYILESR 111 (135)
Q Consensus 91 EA~~~~A~EIV~kIn~ILe~R 111 (135)
+++. +|.+|..-|.-.-++.
T Consensus 136 ~~~~-~A~~I~~aig~AF~~a 155 (175)
T 2ela_A 136 ESNN-EGEKICDSVGLAKQIA 155 (175)
T ss_dssp EESS-CHHHHHHHHHHHHHHH
T ss_pred EEHH-HHHHHHHHHHHHHHHH
T ss_conf 8303-5999999999999999
No 13
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.51 E-value=35 Score=14.66 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=21.8
Q ss_pred CEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCE
Q ss_conf 12268875373899735878755531321677013232310
Q T0614 19 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLL 59 (135)
Q Consensus 19 k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~V 59 (135)
..-++..+|||.|.|||..... ..+.-++.+++
T Consensus 24 l~G~V~sv~~d~Vti~p~~~~L--------~~~l~fp~~~L 56 (59)
T 2e6z_A 24 LQGKILSVDGNKITIMPKHEDL--------KDMLEFPAQEL 56 (59)
T ss_dssp CEEEECCCBTTEEEEEECCSSC--------CSCEEEETTTE
T ss_pred CEEEEEEECCCEEEEEECCCCC--------CCCEEECHHHC
T ss_conf 7999999739989998773014--------87055078986
No 14
>3hqc_A Tensin-like C1 domain-containing phosphatase; TENC1, phosphotyrosine binding domain, PTB, TNS2, KIAA1075, structural genomics, PSI-2; 1.80A {Homo sapiens} PDB: 2dkq_A
Probab=22.14 E-value=39 Score=14.38 Aligned_cols=83 Identities=11% Similarity=0.147 Sum_probs=51.8
Q ss_pred CEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEECC-------CCCCCCEEEEEEECCCCC---EEE
Q ss_conf 1226887537389973587875553132167701323231034443123-------588851799998518860---588
Q T0614 19 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEE-------KSPSHAIFKLTYLSNHDY---KHL 88 (135)
Q Consensus 19 k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~r-------~~~~~~~Fkiv~~~~~~~---KrY 88 (135)
..++.|-|+.+-|.|+-.+++. ++ ...+++..|..|-.-.. ....+..|-.+.....+. -=+
T Consensus 51 ~~~V~L~Vs~~GI~v~d~~~~~----~~----~~~~pi~~ISfca~dp~d~~~~~~~~~~~~~FafIar~~~~~~~~~CH 122 (157)
T 3hqc_A 51 PAVVHFKVSAQGITLTDNQRKL----FF----RRHYPVNSITFSSTDPQDRRWTNPDGTTSKIFGFVAKKPGSPWENVCH 122 (157)
T ss_dssp CEEEEEEEETTEEEEEEEETTE----EE----EEEEEGGGEEEEEECTTCCEEECTTSCEEEEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEECCEEEEEECCCCE----EE----EEECCCCEEEEEEECCHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
T ss_conf 8089999976805999647870----68----985035669999846002112345566673578985278987656779
Q ss_pred EEEC-CHH-HHHHHHHHHHHHHH
Q ss_conf 7517-878-99999999888876
Q T0614 89 YFES-DAA-TVNEIVLKVNYILE 109 (135)
Q Consensus 89 DFEA-~~~-~A~EIV~kIn~ILe 109 (135)
=|-. |+. .|++||+-++-++.
T Consensus 123 VF~~~d~~q~a~~iv~~~~~~~~ 145 (157)
T 3hqc_A 123 LFAELDPDQPAGAIVTFITKVML 145 (157)
T ss_dssp EEECCBTTBCHHHHHHHHHHHHH
T ss_pred EECCCCCCCHHHHHHHHHHHHHH
T ss_conf 84366722639999999999988
No 15
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, cytoplasm, phosphoprotein, signaling protein, structural genomics; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=21.89 E-value=39 Score=14.35 Aligned_cols=79 Identities=9% Similarity=0.104 Sum_probs=55.5
Q ss_pred CEEEEEEECCCEEEEECCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEECC--CCCEEEEEECCHHH
Q ss_conf 1226887537389973587875553132167701323231034443123588851799998518--86058875178789
Q T0614 19 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSN--HDYKHLYFESDAAT 96 (135)
Q Consensus 19 k~Er~L~IDGdyI~I~P~~~~k~~~~f~~~~Kt~S~~i~~Vv~ckiv~r~~~~~~~Fkiv~~~~--~~~KrYDFEA~~~~ 96 (135)
.+.++|.|+.+-|.++-.+++. --..+++..|..|- .+. .++..|-++.... ..+.=|-|..+...
T Consensus 77 ~~~V~L~Vs~~gI~v~d~~t~~---------~l~~~pi~~ISf~~-~d~--~~~~~FafI~~~~~~~~~~CHVF~c~~~~ 144 (168)
T 3f0w_A 77 SVKSVLWVSADGLRVVDDKTKD---------LLVDQTIEKVSFCA-PDR--NLDKAFSYICRDGTTRRWICHCFLALKDS 144 (168)
T ss_dssp CEEEEEEECSSEEEEEETTTCC---------EEEEEEGGGEEEEE-ECS--SCTTEEEEEEEETTTTEEEEEEEEESSSC
T ss_pred CCEEEEEEECCCCEEEECCCCE---------EEEEEEEEEEEEEE-ECC--CCCEEEEEEECCCCCCCEEEEEEEECCHH
T ss_conf 9638999964715999589986---------99997500789999-679--87536603323888886789999957276
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999888876
Q T0614 97 VNEIVLKVNYILE 109 (135)
Q Consensus 97 A~EIV~kIn~ILe 109 (135)
|.+|..-|..-.+
T Consensus 145 A~~I~~ai~~AF~ 157 (168)
T 3f0w_A 145 GERLSHAVGCAFA 157 (168)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
Done!