Query T0615 3NQW, , 179 residues
Match_columns 179
No_of_seqs 119 out of 1092
Neff 7.0
Searched_HMMs 22458
Date Mon Jul 5 09:00:12 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0615.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0615.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vj7_A Bifunctional RELA/SPOT; 100.0 4.2E-45 0 302.7 15.5 169 1-176 20-194 (393)
2 2qgs_A Protein Se1688; alpha-h 97.1 0.0062 2.7E-07 36.6 10.7 110 5-130 3-130 (225)
3 2pq7_A Predicted HD superfamil 96.8 0.025 1.1E-06 32.8 11.6 113 7-129 12-138 (220)
4 3djb_A Hydrolase, HD family; a 96.6 0.018 8.1E-07 33.6 9.6 114 6-131 4-130 (223)
5 3dto_A BH2835 protein; all alp 96.6 0.013 5.7E-07 34.6 8.5 113 6-130 4-129 (223)
6 3b57_A LIN1889 protein; Q92AN1 96.3 0.019 8.6E-07 33.5 8.2 109 6-130 4-130 (209)
7 3kh1_A Predicted metal-depende 96.1 0.069 3.1E-06 30.0 13.3 128 1-134 2-153 (200)
8 2paq_A 5'-deoxynucleotidase YF 95.5 0.038 1.7E-06 31.6 6.8 103 33-137 32-157 (201)
9 2pjq_A Uncharacterized protein 95.4 0.054 2.4E-06 30.7 7.2 112 7-130 10-135 (231)
10 3ccg_A HD superfamily hydrolas 90.5 0.77 3.4E-05 23.4 11.2 141 33-177 20-190 (190)
11 2cqz_A 177AA long hypothetical 90.3 0.69 3.1E-05 23.7 6.3 90 33-129 33-133 (177)
12 3gw7_A Uncharacterized protein 90.0 0.055 2.4E-06 30.6 0.5 33 34-66 27-62 (239)
13 2o08_A BH1327 protein; NP_2421 87.4 0.36 1.6E-05 25.4 3.2 35 32-66 18-55 (188)
14 2ogi_A Hypothetical protein SA 86.8 0.41 1.8E-05 25.1 3.2 34 33-66 27-63 (196)
15 2gz4_A Hypothetical protein AT 86.7 0.4 1.8E-05 25.2 3.1 36 32-67 53-90 (207)
16 2q14_A Phosphohydrolase; BT420 81.7 0.55 2.5E-05 24.3 2.1 57 7-64 25-98 (410)
17 3irh_A HD domain protein; phos 80.6 0.64 2.8E-05 23.9 2.1 56 8-64 57-136 (480)
18 1xx7_A Oxetanocin-like protein 79.0 2.8 0.00012 19.9 7.2 89 33-129 38-138 (184)
19 2hek_A Hypothetical protein; p 78.3 0.38 1.7E-05 25.3 0.3 58 7-64 20-86 (371)
20 1ynb_A Hypothetical protein AF 68.6 5 0.00022 18.3 5.2 82 32-129 38-130 (173)
21 3hc1_A Uncharacterized HDOD do 66.8 5.5 0.00024 18.0 7.4 102 32-133 118-248 (305)
22 2dqb_A Deoxyguanosinetriphosph 63.8 5 0.00022 18.3 3.4 120 7-127 47-200 (376)
23 2pgs_A Putative deoxyguanosine 59.3 3.8 0.00017 19.0 2.1 58 7-64 34-111 (451)
24 2huo_A Inositol oxygenase; pro 55.9 8.5 0.00038 16.8 4.5 55 9-66 77-131 (289)
25 2ibn_A Inositol oxygenase; red 55.5 8.7 0.00039 16.8 4.1 55 8-65 37-91 (250)
26 3bg2_A DGTP triphosphohydrolas 51.3 6.1 0.00027 17.7 2.1 58 7-64 36-118 (444)
27 1tbf_A CGMP-specific 3',5'-cyc 50.2 10 0.00047 16.2 3.6 51 30-81 97-166 (347)
28 2our_A CAMP and CAMP-inhibited 42.6 13 0.00058 15.7 2.6 62 25-86 71-148 (331)
29 2r8q_A Class I phosphodiestera 41.2 14 0.00064 15.4 2.8 42 25-66 91-144 (359)
30 3i7a_A Putative metal-dependen 37.9 14 0.00061 15.5 2.2 98 32-129 117-239 (281)
31 1vqr_A Hypothetical protein CJ 36.2 17 0.00077 14.9 4.5 33 33-65 125-161 (297)
32 3m1t_A Putative phosphohydrola 35.3 18 0.0008 14.8 10.3 100 31-130 104-229 (275)
33 3dyn_A High affinity CGMP-spec 33.2 16 0.0007 15.1 1.8 39 28-66 69-119 (329)
34 3itu_A CGMP-dependent 3',5'-cy 32.9 16 0.0007 15.1 1.8 54 26-80 74-146 (345)
35 3ljx_A MMOQ response regulator 32.1 20 0.0009 14.5 4.0 34 32-65 108-145 (288)
36 3bjc_A CGMP-specific 3',5'-cyc 29.2 22 0.001 14.2 3.6 56 30-85 612-685 (878)
37 3ibj_A CGMP-dependent 3',5'-cy 27.9 21 0.00092 14.4 1.7 42 26-67 435-488 (691)
38 2ae8_A IGPD, imidazoleglycerol 23.8 3.3 0.00015 19.4 -3.0 49 29-81 58-111 (221)
39 2f1d_A IGPD 1, imidazoleglycer 22.9 3.3 0.00015 19.4 -3.1 49 29-81 40-93 (207)
40 1so2_A CGMP-inhibited 3',5'-cy 21.8 31 0.0014 13.3 3.0 20 26-45 76-97 (420)
41 1taz_A Calcium/calmodulin-depe 20.3 33 0.0015 13.1 2.8 50 31-81 79-147 (365)
No 1
>1vj7_A Bifunctional RELA/SPOT; HD domain, alpha beta 2-layer sandwich, helix bundle, manganese, GDP, PPG2':3'P, (P)PPGPP, PPGPP; HET: GDP GPX; 2.10A {Streptococcus dysgalactiae subsp} SCOP: a.211.1.1 d.218.1.8
Probab=100.00 E-value=4.2e-45 Score=302.68 Aligned_cols=169 Identities=30% Similarity=0.399 Sum_probs=153.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC
Q ss_conf 98543689999999999970267657888872568889999999971036889999999997677514512889998518
Q T0615 1 MATYPSAKFMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVEDTDASFEDVEKLFG 80 (179)
Q Consensus 1 ~~~~~~~~~~~A~~~A~~~H~gq~rk~g~~~PY~~H~~~Va~il~~~~~~~D~~~i~AalLHDvvEDt~~t~~~l~~~FG 80 (179)
|++.....+.+|+.||.++|.||+||||+ ||++||++||.+|+..+ .|+++++||||||++|||++|.++|++.||
T Consensus 20 l~~~d~~~i~kA~~~A~~~H~gQ~RksG~--pyi~Hp~~Va~iL~~l~--~D~~ti~AaLLHDvvEDt~~t~eeI~~~FG 95 (393)
T 1vj7_A 20 MNETDAAFVKKALDYATAAHFYQVRKSGE--PYIVHPIQVAGILADLH--LDAVTVACGFLHDVVEDTDITLDNIEFDFG 95 (393)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTTCBCTTSC--BTTHHHHHHHHHHHHTT--CCHHHHHHHHHTTHHHHSSCCHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHCCCCCHHHHHHHHC
T ss_conf 99988999999999999996788189998--38999999999998839--999999999704255136878999987502
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHH------HHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 889999997014445783689999999------98756889989899989868888873596789999999999999999
Q T0615 81 PDVCGLVREVTDDKSLEKQERKRLQIE------NAAKSSCRAKLIKLADKLDNLRDLQVNTPTGWTQERRDQYFVWAKKV 154 (179)
Q Consensus 81 ~~Va~lV~~lT~~~~~~~~~~~~~~~~------~~~~~d~~v~lIKLADrl~Nlr~l~~~~~~~~~~~a~e~~~~ya~~l 154 (179)
++|+.+|.++|+++.++...+...+.. ..++.|+||++|||||||||||++...|+++++++++||+.+|+|
T Consensus 96 ~~Va~lV~~vtkl~~~~~~~~~~~~a~~~Rkmlla~~~DiRVvlIKLADRLhnmrtl~~~~~~kq~~iA~ETl~iyaP-- 173 (393)
T 1vj7_A 96 KDVRDIVDGVTKLGKVEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAP-- 173 (393)
T ss_dssp HHHHHHHHHHHHHC--------------CCSCTTTSCCCHHHHHHHHHHHHHHHHTCC------HHHHHHHHHHTHHH--
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--
T ss_conf 478888776530120000011112479999999984678608741899999999876109999999999999999999--
Q ss_pred HHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 9985058888999999999962
Q T0615 155 VDNLRGTNANLELKLDEIFRQR 176 (179)
Q Consensus 155 l~~~~~~~~~L~~el~~~~~~~ 176 (179)
++++.|+ +.++|||||+.++.
T Consensus 174 LA~RLGi-~~ik~ELEDL~Fk~ 194 (393)
T 1vj7_A 174 LAHRLGI-SRIKWELEDLAFRY 194 (393)
T ss_dssp HHHHTTC-HHHHHHHHHHHHHH
T ss_pred HHHHHCC-HHHHHHHHHHHHHH
T ss_conf 8877140-68999999999976
No 2
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Staphylococcus epidermidis atcc 12228} SCOP: a.211.1.1
Probab=97.14 E-value=0.0062 Score=36.60 Aligned_cols=110 Identities=19% Similarity=0.263 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHH----
Q ss_conf 36899999999999702676578888725688899999999----7103688999999999767751451288999----
Q T0615 5 PSAKFMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILS----VEACITDEGVLMAALLHDVVEDTDASFEDVE---- 76 (179)
Q Consensus 5 ~~~~~~~A~~~A~~~H~gq~rk~g~~~PY~~H~~~Va~il~----~~~~~~D~~~i~AalLHDvvEDt~~t~~~l~---- 76 (179)
..+.+.++.+|....+.+. .+|- =+.|...|..... .++......+++||||||+. |....-+...
T Consensus 3 ~~~~i~~~~~~vk~~~~~~--~~~H---d~~H~~RV~~~A~~Ia~~e~~~D~~vv~lAAlLHDig-d~k~~~e~~~a~~a 76 (225)
T 2qgs_A 3 SRMKIKKAYEYMKSFHQHD--TTGH---DIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTV-DSKLTDEILAYDQL 76 (225)
T ss_dssp HHHHHHHHHHHHHHHTTTC--SSCH---HHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHTTTT-CCSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCC--CCCC---CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC-CCCCCCHHHHHHHH
T ss_conf 5789999999999986389--9877---9999999999999999884988499999999986234-33356728889999
Q ss_pred ----HH--CCHHH----HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf ----85--18889----99999701444578368999999998756889989899989868888
Q T0615 77 ----KL--FGPDV----CGLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNLRD 130 (179)
Q Consensus 77 ----~~--FG~~V----a~lV~~lT~~~~~~~~~~~~~~~~~~~~~d~~v~lIKLADrl~Nlr~ 130 (179)
.. |.++. ..+|...+-.... ......++.+.+|.=||||+.+..
T Consensus 77 ~~~L~~~g~~~~~i~~I~~~I~~hs~~~~~----------~~~~p~tle~~Iv~DADrLDalGA 130 (225)
T 2qgs_A 77 KQFLSTLDLSSEISQQVLYIIKHMSYRAGK----------NNHVKLSIDGEIVRDADRLDAIGA 130 (225)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHTTC-----------------CCCCCHHHHHHHHHHHHTTSHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHCCCCCCC----------CCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999988799999999999999970755788----------899976889999998999986554
No 3
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=96.81 E-value=0.025 Score=32.79 Aligned_cols=113 Identities=16% Similarity=0.186 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH---HHHCCCCCH-HHHHHHHHHHHHHHCCCHHHHHHHHC--C
Q ss_conf 89999999999970267657888872568889999999---971036889-99999999767751451288999851--8
Q T0615 7 AKFMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTIL---SVEACITDE-GVLMAALLHDVVEDTDASFEDVEKLF--G 80 (179)
Q Consensus 7 ~~~~~A~~~A~~~H~gq~rk~g~~~PY~~H~~~Va~il---~~~~~~~D~-~~i~AalLHDvvEDt~~t~~~l~~~F--G 80 (179)
..+.+...|......+....| -+ +.|...|+... +... +.|. .+.+||||||+-... ...... +
T Consensus 12 ~~l~~i~~~v~~~~~~~~d~s-Hd---~~H~~RV~~~A~~Ia~~e-~~D~~vv~lAAlLHDig~~~-----~~~~~~~h~ 81 (220)
T 2pq7_A 12 PHLREILNIVREAFKDYDDPA-HD---ISHTFRVMENASEIASRE-KCDLQKAIIAALLHDIKRPH-----EALTGVDHA 81 (220)
T ss_dssp TTHHHHHHHHHHHHTTCCCTT-TS---HHHHHHHHHHHHHHHHHH-TCCHHHHHHHHHHTTTTHHH-----HHHHCCCHH
T ss_pred HHHHHHHHHHHHHHHHCCCCC-CC---HHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHH-----HCCCCCCHH
T ss_conf 999999999999986589987-77---699999999999999884-99999999999988751132-----067743488
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHH--HHHH------HHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 88999999701444578368999--9999------9875688998989998986888
Q T0615 81 PDVCGLVREVTDDKSLEKQERKR--LQIE------NAAKSSCRAKLIKLADKLDNLR 129 (179)
Q Consensus 81 ~~Va~lV~~lT~~~~~~~~~~~~--~~~~------~~~~~d~~v~lIKLADrl~Nlr 129 (179)
..-+.++...-...+.+...... ..+. .....++.+.+|.-||||+.+.
T Consensus 82 ~~~~~~a~~~L~~~~~~~~~i~~I~~aI~~H~~~~~~~~~s~e~~Iv~DAD~LDaiG 138 (220)
T 2pq7_A 82 ESGAEYASGLLPTMGFDISFVAEVSKAIRSHRYSGGLTPTSLTGKILQDADRLDAIG 138 (220)
T ss_dssp HHHHHHHHHHGGGGTCCHHHHHHHHHHHHHCC-----CCCSHHHHHHHHHHHGGGSS
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 999999999998769998999999999998087568777764989999999997334
No 4
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=96.61 E-value=0.018 Score=33.63 Aligned_cols=114 Identities=19% Similarity=0.207 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CCCCHH-HHHHHHHHHHHHHCCCH--------HHH
Q ss_conf 6899999999999702676578888725688899999999710--368899-99999997677514512--------889
Q T0615 6 SAKFMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEA--CITDEG-VLMAALLHDVVEDTDAS--------FED 74 (179)
Q Consensus 6 ~~~~~~A~~~A~~~H~gq~rk~g~~~PY~~H~~~Va~il~~~~--~~~D~~-~i~AalLHDvvEDt~~t--------~~~ 74 (179)
.+.+.++.+|......+.. +|-+ +.|..+|+.+....+ .+.|.+ +..||||||+...-... ..+
T Consensus 4 ~e~i~~~~~~v~~~~~~~~--~~Hd---~~H~~RV~~~A~~Ia~~eg~D~~vv~~AAlLHDIg~~k~~~~~~~~~~~~~~ 78 (223)
T 3djb_A 4 QEKIEKTITFVKHILEKDA--SGHD---WYHIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADEKLNESEEAGMKKVSD 78 (223)
T ss_dssp HHHHHHHHHHHHHHTTSSS--CTTT---HHHHHHHHHHHHHHHTTTCSCHHHHHHHHTTHHHHC--CCSSSTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCC--CCCC---HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 9999999999999962787--7688---6999999999999999849999999999988623764355317668999999
Q ss_pred HHHH--CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9985--18889999997014445783689999999987568899898999898688888
Q T0615 75 VEKL--FGPDVCGLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNLRDL 131 (179)
Q Consensus 75 l~~~--FG~~Va~lV~~lT~~~~~~~~~~~~~~~~~~~~~d~~v~lIKLADrl~Nlr~l 131 (179)
+... |.++....|..+-...+-+... .....++.+.+|.-|||++.|..+
T Consensus 79 ~L~~~~~~~~~i~~I~~iI~~Hsy~~g~-------~~~~~slEa~Iv~dADrLDAlGai 130 (223)
T 3djb_A 79 WLEELHVEEEESKHVLHIIANMSYKGGH-------GGKVESIEGKLVQDADRLDALGAI 130 (223)
T ss_dssp HHHHTCCCHHHHHHHHHHTTCCC------------------HHHHHHHHHHHTTTSSHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHCCCCCCC-------CCCCCCHHHHHHHHHHHHHHCCCH
T ss_conf 9998699999999999999977997899-------999869999999938987201122
No 5
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=96.56 E-value=0.013 Score=34.62 Aligned_cols=113 Identities=16% Similarity=0.173 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH---HHHCCCCCHHHHHHHHHHHHHHHCCCHH----H----H
Q ss_conf 689999999999970267657888872568889999999---9710368899999999976775145128----8----9
Q T0615 6 SAKFMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTIL---SVEACITDEGVLMAALLHDVVEDTDASF----E----D 74 (179)
Q Consensus 6 ~~~~~~A~~~A~~~H~gq~rk~g~~~PY~~H~~~Va~il---~~~~~~~D~~~i~AalLHDvvEDt~~t~----~----~ 74 (179)
.+.+.++.+|..+...++. +|-+ +.|..+|.... +.........+.+||||||+...-.... . .
T Consensus 4 ~~ii~~~~~~v~~~~~~~~--~~Hd---~~H~~RV~~~A~~Ia~~e~~D~~vv~lAAlLHDi~d~k~~~~~~~~~~~a~~ 78 (223)
T 3dto_A 4 QAILQSAEAWVKKQLMDEY--SGHD---WYHIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLIDDKLVDDPETAKQQLID 78 (223)
T ss_dssp HHHHHHHHHHHHHTTTTC------C---HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSTTC-------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCC--CCCC---HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9999999999999851688--8788---7999999999999998858889999999998000224457767777899999
Q ss_pred HHHH--CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 9985--1888999999701444578368999999998756889989899989868888
Q T0615 75 VEKL--FGPDVCGLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNLRD 130 (179)
Q Consensus 75 l~~~--FG~~Va~lV~~lT~~~~~~~~~~~~~~~~~~~~~d~~v~lIKLADrl~Nlr~ 130 (179)
+... |.+.....|..+-...+.... ......++.+.+|.=||||+.|..
T Consensus 79 ~L~~~g~~~~~i~~V~~~I~~~s~~~~-------~~~~~~t~e~~Iv~DADrLDalGA 129 (223)
T 3dto_A 79 WMEAAGVPSQKIDHTMDIINTISFKGG-------HGQSLATREAMVVQDADRLDALGA 129 (223)
T ss_dssp HHHTTTCCHHHHHHHHHHHHCC-----------------CCHHHHHHHHHHHGGGSSH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHCCCC-------CCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 998789999999999999999743368-------899999989999998999984664
No 6
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=96.31 E-value=0.019 Score=33.48 Aligned_cols=109 Identities=14% Similarity=0.183 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH---HHHCCCCC-HHHHHHHHHHHHHHHCCCH--------HH
Q ss_conf 689999999999970267657888872568889999999---97103688-9999999997677514512--------88
Q T0615 6 SAKFMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTIL---SVEACITD-EGVLMAALLHDVVEDTDAS--------FE 73 (179)
Q Consensus 6 ~~~~~~A~~~A~~~H~gq~rk~g~~~PY~~H~~~Va~il---~~~~~~~D-~~~i~AalLHDvvEDt~~t--------~~ 73 (179)
.+.+.++.+|....+.+.. +|-+ +.|..+|.... +... +.| ..+.+||||||+....... ..
T Consensus 4 ~~~i~~~~~~v~~~~~~~~--~~Hd---~~H~~RV~~lA~~Ia~~e-~~D~~vv~~AAlLHDig~~k~~~~~~~~~~~a~ 77 (209)
T 3b57_A 4 EEIILSAKNWMHSHFENET--TGHD---WSHIKRVWKLSKEIQSKE-GGDLFTIELAALFHDYSDIKLTTDEQEATKTLI 77 (209)
T ss_dssp HHHHHHHHHHHHTTC--------CC---HHHHHHHHHHHHHHHHHH-CSCHHHHHHHHHHTTCCC-------CHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCC--CCCC---HHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 9999999999999853798--8889---999999999999999884-999999999999850365335674777689999
Q ss_pred HHHHH--CCHHH----HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 99985--18889----99999701444578368999999998756889989899989868888
Q T0615 74 DVEKL--FGPDV----CGLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNLRD 130 (179)
Q Consensus 74 ~l~~~--FG~~V----a~lV~~lT~~~~~~~~~~~~~~~~~~~~~d~~v~lIKLADrl~Nlr~ 130 (179)
.+... |.++. ..+|...+..... ......++.+.+|.-||||+.+..
T Consensus 78 ~~L~~~~~~~~~i~~V~~~I~~hs~~~~~----------~~~~p~s~Ea~Iv~DADrLDalGa 130 (209)
T 3b57_A 78 NWMETKEIPSELIKKIIRIIQSVSFKKGK----------NTFKALTIEEKIVQDADRLDAIGA 130 (209)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHC-------------------CCCHHHHHHHHHHHHTTSHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCCC----------CCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99986799988999999999987830479----------999986999999999998752464
No 7
>3kh1_A Predicted metal-dependent phosphohydrolase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.37A {Magnetospirillum magnetotacticum ms-1}
Probab=96.07 E-value=0.069 Score=29.99 Aligned_cols=128 Identities=19% Similarity=0.248 Sum_probs=69.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHC--CCCCC----CCCC-CCHHHHHHHHHHHHHHHCC----CCCH-HHHHHHHHHHHHHHC
Q ss_conf 985436899999999999702--67657----8888-7256888999999997103----6889-999999997677514
Q T0615 1 MATYPSAKFMECLQYAAFKHR--QQRRK----DPQE-TPYVNHVINVSTILSVEAC----ITDE-GVLMAALLHDVVEDT 68 (179)
Q Consensus 1 ~~~~~~~~~~~A~~~A~~~H~--gq~rk----~g~~-~PY~~H~~~Va~il~~~~~----~~D~-~~i~AalLHDvvEDt 68 (179)
|.|-++.|+.+=+.|-..+.. ...|. +|.+ +-=-.|...||.+.....- ..|. .++.-|++||+.|--
T Consensus 2 ~~~~~~~~~~~~~~Fl~~~~~LK~v~R~g~~~~~~r~EsvAeHS~~~al~a~~l~~~~~~~~d~~kv~~maL~HDl~E~~ 81 (200)
T 3kh1_A 2 MIPFPESRLAAQMSFVVEIDKLKTILRQTLLTDSSRRENDAEHSWHIATMAFLLAEYADEAVQIGRVARMLLIHDIVEID 81 (200)
T ss_dssp CCCGGGHHHHHHHHHHHHGGGGGGCEEEEECTTSSSEEEHHHHHHHHHHHHHHTGGGSCTTCCHHHHHHHHHHTTTTHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99998899999999999999853574276106999974599999999999998777648988989999999998889876
Q ss_pred --CC------HHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHH---HHHHHHHCCHHHHHHHHHHHHHHH-HHHHHC
Q ss_conf --51------2889998518889999997014445783689999---999987568899898999898688-888735
Q T0615 69 --DA------SFEDVEKLFGPDVCGLVREVTDDKSLEKQERKRL---QIENAAKSSCRAKLIKLADKLDNL-RDLQVN 134 (179)
Q Consensus 69 --~~------t~~~l~~~FG~~Va~lV~~lT~~~~~~~~~~~~~---~~~~~~~~d~~v~lIKLADrl~Nl-r~l~~~ 134 (179)
++ +..+..+..-. ....+. ..+|...+.+. -.+.-...++.+.++|-+|++.-+ +.+...
T Consensus 82 ~GDi~~~~~~~~~~k~~~E~~----a~~~l~--~~Lp~~~~~e~~~lw~Eye~~~t~EA~~vk~~Dkle~~lq~~e~~ 153 (200)
T 3kh1_A 82 AGDTFIHDEAGNEDKEERERK----AAARLF--GLLPPDQAAEYSALWQEYEARETADARFADALDRLQPLLHNFETE 153 (200)
T ss_dssp HCCCCTTCCC---CHHHHHHH----HHHHHH--TTSCHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCHHHHHHHHHH----HHHHHH--HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 378777775348888999999----999998--757702589999999998737999999999998224999998813
No 8
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphohydrolase, structural genomics, PSI, protein structure initiative; 2.10A {Escherichia coli K12} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=95.50 E-value=0.038 Score=31.63 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHH--------CCCCCH-HHHHHHHHHHHHHHC--CCH------HHHHHHHCCHHHHHHHHHHCCCCC
Q ss_conf 568889999999971--------036889-999999997677514--512------889998518889999997014445
Q T0615 33 YVNHVINVSTILSVE--------ACITDE-GVLMAALLHDVVEDT--DAS------FEDVEKLFGPDVCGLVREVTDDKS 95 (179)
Q Consensus 33 Y~~H~~~Va~il~~~--------~~~~D~-~~i~AalLHDvvEDt--~~t------~~~l~~~FG~~Va~lV~~lT~~~~ 95 (179)
=..|...||.+.... +...|. .++..||+||+.|-- +++ ...+.+.+...-...+..+. ..
T Consensus 32 VAeHs~~va~ia~~la~~~~~~~g~~vd~~k~~~maL~HDl~E~~~GDi~~~~k~~~~~~~~~~~~~E~~a~~~l~--~~ 109 (201)
T 2paq_A 32 VSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLV--DM 109 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHTTTTHHHHCCCCCC---------CTHHHHHHHHHHHHH--TT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--HH
T ss_conf 9999999999999999888774356779999999999710488870788755535656779999999999999988--50
Q ss_pred CCHHHHHH--HHHHHHHHCCHHHHHHHHHHHHHHHH----HHHHCCHH
Q ss_conf 78368999--99999875688998989998986888----88735967
Q T0615 96 LEKQERKR--LQIENAAKSSCRAKLIKLADKLDNLR----DLQVNTPT 137 (179)
Q Consensus 96 ~~~~~~~~--~~~~~~~~~d~~v~lIKLADrl~Nlr----~l~~~~~~ 137 (179)
+|...+.. .........++.+.+||.||+++.+- ..+..+++
T Consensus 110 lp~~~~~~~~~~~e~e~~~s~Ea~lvk~aDkle~~lqa~ey~~~Gn~e 157 (201)
T 2paq_A 110 VPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNE 157 (201)
T ss_dssp SCGGGHHHHHHHHTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCGG
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 878899999999975057988999999998999999999999858952
No 9
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=95.36 E-value=0.054 Score=30.67 Aligned_cols=112 Identities=21% Similarity=0.234 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CCCC-HHHHHHHHHHHHHHHCCC-----HHHHHHHH
Q ss_conf 899999999999702676578888725688899999999710--3688-999999999767751451-----28899985
Q T0615 7 AKFMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEA--CITD-EGVLMAALLHDVVEDTDA-----SFEDVEKL 78 (179)
Q Consensus 7 ~~~~~A~~~A~~~H~gq~rk~g~~~PY~~H~~~Va~il~~~~--~~~D-~~~i~AalLHDvvEDt~~-----t~~~l~~~ 78 (179)
..+....+|+.....+. . +|-+ +.|..+|........ .+.| ..+++||||||+...-.. ....+...
T Consensus 10 ~~i~~i~~~~~~~l~~~-~-~~Hd---~~H~~RV~~~A~~Ia~~E~~D~~vv~~AAlLHDi~d~k~~~~~~~~~~~~~~~ 84 (231)
T 2pjq_A 10 TQLTAIQTYALQKLAHD-H-SGHG---RDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDDKLMANPAKAHQDLIVQ 84 (231)
T ss_dssp HHHHHHHHHHHTSSTTC-C-SSCS---HHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHC---------CHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC-C-CCCC---HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999987058-7-7678---79999999999999988499999999999997003422569887899999999
Q ss_pred -----CCHH-HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf -----1888-999999701444578368999999998756889989899989868888
Q T0615 79 -----FGPD-VCGLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNLRD 130 (179)
Q Consensus 79 -----FG~~-Va~lV~~lT~~~~~~~~~~~~~~~~~~~~~d~~v~lIKLADrl~Nlr~ 130 (179)
|.++ +..++..+.... ..... ......++.+.+|.=||||+.+..
T Consensus 85 L~~~~~~~~~i~~I~~iI~~hs-~s~~~------~~~~p~tlEa~IvqDADrLDalGA 135 (231)
T 2pjq_A 85 LNAQNVTADDQTAIFAIIDHMS-FSKSF------NGPQKLSLEGQVVQDADRLDAIGA 135 (231)
T ss_dssp HHTTTCCHHHHHHHHHHHTSCC-TGGGG------GCCCCCCSHHHHHHHHHHHTTSHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHH-HHHCC------CCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 8719979899999999999789-87136------789986689999998998851242
No 10
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=90.51 E-value=0.77 Score=23.39 Aligned_cols=141 Identities=15% Similarity=0.124 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHC--CCCC-HHHHHHHHHHHHHHHCCCHHHHHHHHC---CHHHHHHHHH------------HCC-C
Q ss_conf 5688899999999710--3688-999999999767751451288999851---8889999997------------014-4
Q T0615 33 YVNHVINVSTILSVEA--CITD-EGVLMAALLHDVVEDTDASFEDVEKLF---GPDVCGLVRE------------VTD-D 93 (179)
Q Consensus 33 Y~~H~~~Va~il~~~~--~~~D-~~~i~AalLHDvvEDt~~t~~~l~~~F---G~~Va~lV~~------------lT~-~ 93 (179)
=+.|.++||.+....+ .+.| +.+.+||+|||+=... . .+.+.+.+ +......... +.+ .
T Consensus 20 r~~Hs~~Va~lA~~lA~~lgld~e~~~~agLlHDIGK~~-~-~~~il~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 97 (190)
T 3ccg_A 20 RYKHSLGVMDTAVRLAGIYNEDTEKARIAGLVHDCAKKL-P-GEKIIEICTNEGYELGDEDIRNSYLLHGLAGRILAKKV 97 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTS-C-HHHHHHHHHHTTCCCCHHHHTTTTC-CHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-C-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 738999999999999998396999999999998805656-8-69999987642663039998756420799999998765
Q ss_pred CCCCHHHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-----HHHHHH---HHHHHHCCCC
Q ss_conf 457836899999999---87568899898999898688888735967899999999-----999999---9999850588
Q T0615 94 KSLEKQERKRLQIEN---AAKSSCRAKLIKLADKLDNLRDLQVNTPTGWTQERRDQ-----YFVWAK---KVVDNLRGTN 162 (179)
Q Consensus 94 ~~~~~~~~~~~~~~~---~~~~d~~v~lIKLADrl~Nlr~l~~~~~~~~~~~a~e~-----~~~ya~---~ll~~~~~~~ 162 (179)
..............+ ....+....+|.+||.++..|......+ .+ ..+... ...+.. -+...-+.++
T Consensus 98 ~~~~~~~i~~ai~~H~~G~p~~~~~~~Iv~~AD~~~~~r~~~~~~~-~r-~~~~~~ld~~~~~~~~~~i~~l~~~~~~i~ 175 (190)
T 3ccg_A 98 IGIDDEDVLNAIEFHTTGRPNMSLLEKIIYIADYIEPGREFKGVDE-LR-KAADEDLNKALLMSFDNTIKFVIDKGGFLH 175 (190)
T ss_dssp TCCCCHHHHHHHHTTTTCCSSCCHHHHHHHHHHHHSTTCCCTTHHH-HH-HHHHHCHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH-HH-HHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 1367199999998338998785889999999999735899852899-99-998655149999999999999999689438
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 889999999999626
Q T0615 163 ANLELKLDEIFRQRG 177 (179)
Q Consensus 163 ~~L~~el~~~~~~~~ 177 (179)
|..-.-++.++.++|
T Consensus 176 P~~ve~~n~~v~~~g 190 (190)
T 3ccg_A 176 HNTIEARNYLISRKG 190 (190)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHCCC
T ss_conf 899999999986079
No 11
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.60A {Pyrococcus horikoshii OT3}
Probab=90.30 E-value=0.69 Score=23.68 Aligned_cols=90 Identities=29% Similarity=0.276 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHH-------CCCCC-HHHHHHHHHHHHHHHC--CCHHHHHHHH-CCHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 568889999999971-------03688-9999999997677514--5128899985-18889999997014445783689
Q T0615 33 YVNHVINVSTILSVE-------ACITD-EGVLMAALLHDVVEDT--DASFEDVEKL-FGPDVCGLVREVTDDKSLEKQER 101 (179)
Q Consensus 33 Y~~H~~~Va~il~~~-------~~~~D-~~~i~AalLHDvvEDt--~~t~~~l~~~-FG~~Va~lV~~lT~~~~~~~~~~ 101 (179)
=-.|...||.+...+ |...| ..++..|++||+.|-- +++...-... .-.....+...+.. ..
T Consensus 33 VAeHS~~valia~~la~~~~~~~~~vd~~k~~~maL~HDl~E~~~GDi~~~~k~~~~~~~~e~~~~~~~~~----e~--- 105 (177)
T 2cqz_A 33 IADHSFGVAFITLVLADVLEKRGKRIDVEKALKMAIVHDLAEAIITDIPLSAQEFVDKDKAEALVFKKVFP----EF--- 105 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTTTHHHHCCCCTTTTTTSCHHHHHHHHHHHTCG----GG---
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH----HH---
T ss_conf 99999999999999998987725565899999999985699997279998504156799999999887657----68---
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 9999999875688998989998986888
Q T0615 102 KRLQIENAAKSSCRAKLIKLADKLDNLR 129 (179)
Q Consensus 102 ~~~~~~~~~~~d~~v~lIKLADrl~Nlr 129 (179)
.......-...++.+.++|.+|+++.+-
T Consensus 106 ~~l~~Eye~~~t~Ea~~vk~~Dkl~~~l 133 (177)
T 2cqz_A 106 YELYREYQECSSPEAQLVRIADKLDMIL 133 (177)
T ss_dssp HHHHHHHHHTCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 9987998837868999999999999999
No 12
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=90.03 E-value=0.055 Score=30.62 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHHH
Q ss_conf 688899999999710---368899999999976775
Q T0615 34 VNHVINVSTILSVEA---CITDEGVLMAALLHDVVE 66 (179)
Q Consensus 34 ~~H~~~Va~il~~~~---~~~D~~~i~AalLHDvvE 66 (179)
+.|..+|........ ......+.+||||||+..
T Consensus 27 ~~Hi~RV~~~A~~Ia~~e~~D~~vv~~AALLHDIgd 62 (239)
T 3gw7_A 27 VCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVS 62 (239)
T ss_dssp CCHHHHHHHHHHHHTTTSCSCTTHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
T ss_conf 799999999999999874988999999999734331
No 13
>2o08_A BH1327 protein; NP_242193.1, hypothetical protein, structural genomics, joint center for structural genomics, JCSG, PSI-2; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=87.43 E-value=0.36 Score=25.45 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHH---HHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 2568889999999---9710368899999999976775
Q T0615 32 PYVNHVINVSTIL---SVEACITDEGVLMAALLHDVVE 66 (179)
Q Consensus 32 PY~~H~~~Va~il---~~~~~~~D~~~i~AalLHDvvE 66 (179)
..+.|.++||.+. +...+.....+.+||||||+=.
T Consensus 18 ~r~~Hs~~Va~~A~~lA~~lg~d~~~~~~agLLHDIGK 55 (188)
T 2o08_A 18 HRYQHTIGVMETAIDLAKLYGADQQKAELAAIFHDYAK 55 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
T ss_conf 57299999999999999992919999999999987326
No 14
>2ogi_A Hypothetical protein SAG1661; NP_688652.1, conserved hypothetical protein TIGR00488, structural genomics; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=86.82 E-value=0.41 Score=25.10 Aligned_cols=34 Identities=38% Similarity=0.340 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHC--CCCC-HHHHHHHHHHHHHH
Q ss_conf 5688899999999710--3688-99999999976775
Q T0615 33 YVNHVINVSTILSVEA--CITD-EGVLMAALLHDVVE 66 (179)
Q Consensus 33 Y~~H~~~Va~il~~~~--~~~D-~~~i~AalLHDvvE 66 (179)
=+.|.++||.+....+ .+.| +.+-+||||||+=.
T Consensus 27 r~~Hs~~Va~~a~~LA~~~g~d~~~~~lAgLLHDIGK 63 (196)
T 2ogi_A 27 RFNHVLGVERAAIELAERYGYDKEKAGLAALLHDYAK 63 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf 6599999999999999980959999999999987135
No 15
>2gz4_A Hypothetical protein ATU1052; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Agrobacterium tumefaciens str} SCOP: a.211.1.1
Probab=86.70 E-value=0.4 Score=25.17 Aligned_cols=36 Identities=28% Similarity=0.305 Sum_probs=28.0
Q ss_pred CHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 256--888999999997103688999999999767751
Q T0615 32 PYV--NHVINVSTILSVEACITDEGVLMAALLHDVVED 67 (179)
Q Consensus 32 PY~--~H~~~Va~il~~~~~~~D~~~i~AalLHDvvED 67 (179)
||- .|++-|+.++....-+.+.....+|||||.-|-
T Consensus 53 fySVAqHsvlv~~~~~~~~~~~~~~~~l~aLLHDA~Ea 90 (207)
T 2gz4_A 53 AFTVAQHCLIVETIFCRMCPGATPDEMQMALLHDAPEY 90 (207)
T ss_dssp CCBHHHHHHHHHHHHHHHCTTCCHHHHHHHHTTTTTHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH
T ss_conf 41399999999999998679999899999986477899
No 16
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=81.69 E-value=0.55 Score=24.30 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHCCCCC------CCCCCCCHHHHHHHHHHHHHHHCCC--------C---CHHHHHHHHHHHH
Q ss_conf 8999999999997026765------7888872568889999999971036--------8---8999999999767
Q T0615 7 AKFMECLQYAAFKHRQQRR------KDPQETPYVNHVINVSTILSVEACI--------T---DEGVLMAALLHDV 64 (179)
Q Consensus 7 ~~~~~A~~~A~~~H~gq~r------k~g~~~PY~~H~~~Va~il~~~~~~--------~---D~~~i~AalLHDv 64 (179)
.++...-.|-+-.+--|.- + |...-=++|.++|+.+....... . -..+.+||||||+
T Consensus 25 ~~iidt~~fQRLr~I~Qlg~~~~v~p-~a~HtRfeHSlGv~~la~~~~~~l~~~~~~~~~~~~~~~~~AaLlHDi 98 (410)
T 2q14_A 25 YDIVRHPLLQRLTRIKQVGLSSVVYP-GAQHTRFQHSLGAFYLMSEAITQLTSKGNFIFDSEAEAVQAAILLHDI 98 (410)
T ss_dssp HHHHHSHHHHGGGGSBTTTTTTTTCT-TCCCBHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTT
T ss_pred HHHCCCHHHHCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 98629976720068553787767789-982271209999999999999999860898887899999999998706
No 17
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, PSI-2, protein structure initiative; HET: DGT DTP; 2.40A {Enterococcus faecalis V583} PDB: 2o6i_A*
Probab=80.58 E-value=0.64 Score=23.91 Aligned_cols=56 Identities=23% Similarity=0.219 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHCCCC------CCCCCCCCHHHHHHHHHHHHHHHCC---------------C--CC-HHHHHHHHHHH
Q ss_conf 99999999999702676------5788887256888999999997103---------------6--88-99999999976
Q T0615 8 KFMECLQYAAFKHRQQR------RKDPQETPYVNHVINVSTILSVEAC---------------I--TD-EGVLMAALLHD 63 (179)
Q Consensus 8 ~~~~A~~~A~~~H~gq~------rk~g~~~PY~~H~~~Va~il~~~~~---------------~--~D-~~~i~AalLHD 63 (179)
++..--.|-+-.+--|. =+ |...-=++|.++|+.+.....- . .+ ..+.+||||||
T Consensus 57 ~iIdtp~fQRLR~IkQLG~~~~vyP-gA~HtRfeHSLGv~~la~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~~AaLLHD 135 (480)
T 3irh_A 57 DLINSAEVQRLRRIKQLGTSSFTFH-GAEHSRFSHSLGVYEITRRICEIFQRNYSVERLGENGWNDDERLITLCAALLHD 135 (480)
T ss_dssp HHHTSHHHHGGGGSBSSTTGGGTST-TCCCBHHHHHHHHHHHHHHHHHHHHHHSBHHHHGGGSBCGGGHHHHHHHHHHTT
T ss_pred HHCCCHHHHHHCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 8639987730255753676664578-981372109999999999999999860641113445677788999999999861
Q ss_pred H
Q ss_conf 7
Q T0615 64 V 64 (179)
Q Consensus 64 v 64 (179)
+
T Consensus 136 i 136 (480)
T 3irh_A 136 V 136 (480)
T ss_dssp T
T ss_pred C
T ss_conf 4
No 18
>1xx7_A Oxetanocin-like protein; PSI, secsg, protein structure initiative, southeast collaboratory for structural genomics; 2.26A {Pyrococcus furiosus} SCOP: a.211.1.1
Probab=78.98 E-value=2.8 Score=19.86 Aligned_cols=89 Identities=26% Similarity=0.318 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHC-------CCCCH-HHHHHHHHHHHHHHC--CCHHHHHHHHCCHHHH--HHHHHHCCCCCCCHHH
Q ss_conf 5688899999999710-------36889-999999997677514--5128899985188899--9999701444578368
Q T0615 33 YVNHVINVSTILSVEA-------CITDE-GVLMAALLHDVVEDT--DASFEDVEKLFGPDVC--GLVREVTDDKSLEKQE 100 (179)
Q Consensus 33 Y~~H~~~Va~il~~~~-------~~~D~-~~i~AalLHDvvEDt--~~t~~~l~~~FG~~Va--~lV~~lT~~~~~~~~~ 100 (179)
=..|...||.+....+ ...|. .++..|++||+.|-- +++.. .......+-+ ..+..+. +. ...
T Consensus 38 VAeHs~~vA~ia~~la~~~~~~g~~vD~~k~~~maL~HDl~E~~~GDi~~~-~~~~~~k~~~e~~a~~~l~--~~--~~~ 112 (184)
T 1xx7_A 38 VADHSYRVAFITLLLAEELKKKGVEIDVEKALKIAIIHDLGEAIITDLPLS-AQKYLNKEEAEAKALKDVL--PE--YTE 112 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTTTHHHHCCCCHH-HHTTSCHHHHHHHHHHHHC--GG--GHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHHHHCC--HH--HHH
T ss_conf 999999999999999989876355568999999999863899872798765-4023569999999998648--58--888
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999875688998989998986888
Q T0615 101 RKRLQIENAAKSSCRAKLIKLADKLDNLR 129 (179)
Q Consensus 101 ~~~~~~~~~~~~d~~v~lIKLADrl~Nlr 129 (179)
..-..-...++.+.+||.+|+++.+-
T Consensus 113 ---l~~eye~~~t~Ea~~vk~~Dkle~~l 138 (184)
T 1xx7_A 113 ---LFEEYSKALTLEGQLVKIADKLDMII 138 (184)
T ss_dssp ---HHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf ---89998757888999999999999999
No 19
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site and active site being FAR from EACH other, structural genomics; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=78.34 E-value=0.38 Score=25.35 Aligned_cols=58 Identities=19% Similarity=0.277 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCC-----CCCCCHHHHHHHHHHHHHHHC----CCCCHHHHHHHHHHHH
Q ss_conf 899999999999702676578-----888725688899999999710----3688999999999767
Q T0615 7 AKFMECLQYAAFKHRQQRRKD-----PQETPYVNHVINVSTILSVEA----CITDEGVLMAALLHDV 64 (179)
Q Consensus 7 ~~~~~A~~~A~~~H~gq~rk~-----g~~~PY~~H~~~Va~il~~~~----~~~D~~~i~AalLHDv 64 (179)
.|+..--.|=+-.+.-|.=.+ |...-=++|.++|+.+....+ ......+-+||||||+
T Consensus 20 ~rii~s~~frRL~~~~Q~~~~~~v~p~a~htR~~HSLgV~~lar~i~~~L~~~~~~~v~~aaLlHDI 86 (371)
T 2hek_A 20 LRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESLKVKEKELVKLAGLLHDL 86 (371)
T ss_dssp HHHHTSHHHHGGGGSBTTTTGGGTSTTCCCBHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHTTTT
T ss_pred HHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
T ss_conf 9981997671435772378563317998466300999999999999999744338899999998714
No 20
>1ynb_A Hypothetical protein AF1432; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 1.76A {Archaeoglobus fulgidus dsm 4304} SCOP: a.211.1.1 PDB: 1yoy_A
Probab=68.62 E-value=5 Score=18.25 Aligned_cols=82 Identities=18% Similarity=0.123 Sum_probs=41.6
Q ss_pred CHHHHHHHHHHHHH---HHCCCCCH---HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 25688899999999---71036889---9999999976775145128899985188899999970144457836899999
Q T0615 32 PYVNHVINVSTILS---VEACITDE---GVLMAALLHDVVEDTDASFEDVEKLFGPDVCGLVREVTDDKSLEKQERKRLQ 105 (179)
Q Consensus 32 PY~~H~~~Va~il~---~~~~~~D~---~~i~AalLHDvvEDt~~t~~~l~~~FG~~Va~lV~~lT~~~~~~~~~~~~~~ 105 (179)
.=-.|...||.+.. ........ .++.-||+||+.|--..+..- .++... ...+.....
T Consensus 38 sVAeHs~~va~ia~~la~~~~~~~~d~~k~~~maL~HDl~E~~~GDi~~---------------~~k~~~-~~~e~~~~e 101 (173)
T 1ynb_A 38 SVAEHNFRAAIIAFILALKSGESVEKACKAATAALFHDLHEARTMDLHK---------------IARRYV-SCDEEGARE 101 (173)
T ss_dssp BHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTHHHHCCCCT---------------TGGGTC-CCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH---------------HHHHHC-CCCHHHHHH
T ss_conf 7899999999999999867088510099999999999999987179746---------------677501-366688888
Q ss_pred HHH-----HHHCCHHHHHHHHHHHHHHHH
Q ss_conf 999-----875688998989998986888
Q T0615 106 IEN-----AAKSSCRAKLIKLADKLDNLR 129 (179)
Q Consensus 106 ~~~-----~~~~d~~v~lIKLADrl~Nlr 129 (179)
... ....++.+.+||-+|++..+-
T Consensus 102 ~~~~w~Eye~~~s~Ea~~vk~~Dkle~~l 130 (173)
T 1ynb_A 102 EQLSWMESKPDFSDVEVYVSDADKLELAF 130 (173)
T ss_dssp HHTTTCSSCCCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 99989987414348999999987999999
No 21
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=66.75 E-value=5.5 Score=18.02 Aligned_cols=102 Identities=25% Similarity=0.331 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHH---HHHCCCCC-HHHHHHHHHHHHHHH-------------------CCCHHHHHH-HHCCHHHHHHH
Q ss_conf 2568889999999---97103688-999999999767751-------------------451288999-85188899999
Q T0615 32 PYVNHVINVSTIL---SVEACITD-EGVLMAALLHDVVED-------------------TDASFEDVE-KLFGPDVCGLV 87 (179)
Q Consensus 32 PY~~H~~~Va~il---~~~~~~~D-~~~i~AalLHDvvED-------------------t~~t~~~l~-~~FG~~Va~lV 87 (179)
.|+.|.+.+|.+. +......| +++..||+|||+=+= ...+..+.+ +.||..=..+=
T Consensus 118 ~~w~~S~~~A~~a~~lA~~~~~~~~~~a~~aGLLhdiG~l~l~~~~~~~~~~i~~~~~~~~~~~~~~E~~~~G~~h~~ig 197 (305)
T 3hc1_A 118 TLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVG 197 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHHHHHHCCCHHHHHHHHHSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
T ss_conf 88999999999999999980368999999999998469999977666989999999865799989999999688999999
Q ss_pred HHHCCCCCCCHHHHHHHHHH----HH-HHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97014445783689999999----98-756889989899989868888873
Q T0615 88 REVTDDKSLEKQERKRLQIE----NA-AKSSCRAKLIKLADKLDNLRDLQV 133 (179)
Q Consensus 88 ~~lT~~~~~~~~~~~~~~~~----~~-~~~d~~v~lIKLADrl~Nlr~l~~ 133 (179)
..+-+.=++|..-...-..- .. .....-+.+|.+||.+.+.+.+..
T Consensus 198 ~~l~~~W~lP~~i~~ai~~hh~p~~~~~~~~~l~~~v~lA~~l~~~~~~g~ 248 (305)
T 3hc1_A 198 FALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVAMVAFADEYCTLRRLGF 248 (305)
T ss_dssp HHHHHHTTCCHHHHHHHHHTTCGGGCSSSCCHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999998699999999999865924277550359799999999999708887
No 22
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, putative; dntpase, DNTP, single-stranded DNA, DNA, dGTPase, HD superfamily; 2.20A {Thermus thermophilus HB8}
Probab=63.85 E-value=5 Score=18.26 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCC---HHHHHHHHHHHHHHHC--CCCCH-HHHHHHHHHHHHHHCC---CHHHHHHH
Q ss_conf 89999999999970267657888872---5688899999999710--36889-9999999976775145---12889998
Q T0615 7 AKFMECLQYAAFKHRQQRRKDPQETP---YVNHVINVSTILSVEA--CITDE-GVLMAALLHDVVEDTD---ASFEDVEK 77 (179)
Q Consensus 7 ~~~~~A~~~A~~~H~gq~rk~g~~~P---Y~~H~~~Va~il~~~~--~~~D~-~~i~AalLHDvvEDt~---~t~~~l~~ 77 (179)
.|+...-.|=.-.+.-|.-..+.+-= =.+|.++||.|-...+ .+.+. -+-+|||.||+ -..| .-+.-|.+
T Consensus 47 dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLTHSlEVaqi~Rsi~~~l~~~~~lvea~~LaHDi-GhpPFGH~GE~al~~ 125 (376)
T 2dqb_A 47 DRILHTTAFRRLEYKTQVLPGWAGDYYRTRLTHTLEVAQVSRSIARALGLNEDLTEAIALSHDL-GHPPFGHTGEHVLNA 125 (376)
T ss_dssp HHHHHSHHHHHGGGSCSSSCSCC--CCCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTTT-TCCSSTTHHHHHHHH
T ss_pred HHHHCCHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHHH
T ss_conf 3886489886046788784369998536667899999999999999985202047888874222-789852139999899
Q ss_pred HCC--------HHHHHHHHHHCC-C---CCCCHHHHHHHHH-------------HHHHHCCHHHHHHHHHHHHHH
Q ss_conf 518--------889999997014-4---4578368999999-------------998756889989899989868
Q T0615 78 LFG--------PDVCGLVREVTD-D---KSLEKQERKRLQI-------------ENAAKSSCRAKLIKLADKLDN 127 (179)
Q Consensus 78 ~FG--------~~Va~lV~~lT~-~---~~~~~~~~~~~~~-------------~~~~~~d~~v~lIKLADrl~N 127 (179)
.|- ..-.++|..+-+ . .+++-......-+ ..-......+.++.+||-++-
T Consensus 126 ~~~~~ggFegNaQslRilt~Le~~~~~~~GlnLT~~tl~~i~Ky~~~~~~~~~~~~~~~~~lEaqIme~ADDIAY 200 (376)
T 2dqb_A 126 LMQDHGGFEHNAQALRILTHLEVRYPGFRGLNLTYEVLEGIATHEAAYSPGFKPLYEGQGTLEAQVVDLSDAIAY 200 (376)
T ss_dssp HTTTTTCCCHHHHHHHHHHTTCBCBTTBSBCCCCHHHHHHHHHSCC-----------CCSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf 876259900207899999755216777798402354454432033222620456764268778998532542873
No 23
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohydrolase; deoxyguanosinetriphosphate triphsphohydrolase; 2.35A {Pseudomonas syringae PV}
Probab=59.29 E-value=3.8 Score=19.04 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCC---HHHHHHHHHHHHHHHCCCC--C---------------HHHHHHHHHHHH
Q ss_conf 89999999999970267657888872---5688899999999710368--8---------------999999999767
Q T0615 7 AKFMECLQYAAFKHRQQRRKDPQETP---YVNHVINVSTILSVEACIT--D---------------EGVLMAALLHDV 64 (179)
Q Consensus 7 ~~~~~A~~~A~~~H~gq~rk~g~~~P---Y~~H~~~Va~il~~~~~~~--D---------------~~~i~AalLHDv 64 (179)
.|+..--.|-.-.+.-|.-..+++-= =++|.++||.|-...+... + .-+-++||.||+
T Consensus 34 dRIi~S~aFRRLq~KTQVf~~~~~D~~rtRLTHSlEVaqi~Rsi~~~l~~~l~~~~~~~~~~~~~~~lvea~~LaHDi 111 (451)
T 2pgs_A 34 DRIIFSGAFRRLGRKTQVHPVSSNDHIHTRLTHSLEVSCVGRSLGMRVGETLRAALPDWCDPSDLGMVVQSACLAHDI 111 (451)
T ss_dssp HHHHHSHHHHGGGGCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTGGGSCTTCCHHHHHHHHHHHHHHTTT
T ss_pred CHHHCCHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 187658977614468725507999878170679999999999999999988876270003542078899999986327
No 24
>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A*
Probab=55.90 E-value=8.5 Score=16.81 Aligned_cols=55 Identities=18% Similarity=0.158 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999999999702676578888725688899999999710368899999999976775
Q T0615 9 FMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVE 66 (179)
Q Consensus 9 ~~~A~~~A~~~H~gq~rk~g~~~PY~~H~~~Va~il~~~~~~~D~~~i~AalLHDvvE 66 (179)
+.+|+++--. --+.-.++ .+.|=+.|++.+|..+...+...| -...+||+||.=.
T Consensus 77 I~eal~~Ln~-lvD~SDPD-~dlpn~~Ha~QTAE~iR~~~p~~d-W~qL~GLiHDLGK 131 (289)
T 2huo_A 77 IMEAVGMLDD-LVDESDPD-VDFPNSFHAFQTAEGIRKAHPDKD-WFHLVGLLHDLGK 131 (289)
T ss_dssp HHHHHHHGGG-CCCSSCTT-CCSCHHHHHHHHHHHHHHHCTTCH-HHHHHHHHTTGGG
T ss_pred HHHHHHHHHH-HCCCCCCC-CCHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHH
T ss_conf 9999999986-24876666-645589999999999997489900-6786658855435
No 25
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=55.47 E-value=8.7 Score=16.76 Aligned_cols=55 Identities=18% Similarity=0.154 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999999970267657888872568889999999971036889999999997677
Q T0615 8 KFMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVV 65 (179)
Q Consensus 8 ~~~~A~~~A~~~H~gq~rk~g~~~PY~~H~~~Va~il~~~~~~~D~~~i~AalLHDvv 65 (179)
.+.+|++.--. --+.-.++ .+.|=+.|++.+|..+...+...| -...+||+||.=
T Consensus 37 tI~eal~~Ln~-lvD~SDPD-~~lpn~~H~~QTAE~iR~~~p~~d-W~qL~GLiHDLG 91 (250)
T 2ibn_A 37 TVMEAVDLLDG-LVDESDPD-VDFPNSFHAFQTAEGIRKAHPDKD-WFHLVGLLHDLG 91 (250)
T ss_dssp CHHHHHHHGGG-CCCTTC----CCCHHHHHHHHHHHHHHHSTTCH-HHHHHHHHTTGG
T ss_pred EHHHHHHHHHH-HCCCCCCC-CCHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHH
T ss_conf 49999999986-24877666-645689999999999997389901-788776886777
No 26
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis MED217}
Probab=51.34 E-value=6.1 Score=17.73 Aligned_cols=58 Identities=17% Similarity=0.194 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCC---HHHHHHHHHHHHHHHCCCC----------------------CHHHHHHHHH
Q ss_conf 89999999999970267657888872---5688899999999710368----------------------8999999999
Q T0615 7 AKFMECLQYAAFKHRQQRRKDPQETP---YVNHVINVSTILSVEACIT----------------------DEGVLMAALL 61 (179)
Q Consensus 7 ~~~~~A~~~A~~~H~gq~rk~g~~~P---Y~~H~~~Va~il~~~~~~~----------------------D~~~i~AalL 61 (179)
.|+..--.|=.-.+.-|.-..+++-= =++|.++||.|-...+... ..-+-+|||.
T Consensus 36 dRIi~S~aFRRLq~KTQVf~~~~~D~~RtRLTHSLEVAqIaRsi~~~l~~~l~~~~~~~~~~~~~~~~~~~~Lveaa~La 115 (444)
T 3bg2_A 36 DRIIFSAPFRSLQDKTQVIPLSKTDFVHTRLTHSLEVSVVGRSLGRMVGKKLLEKYPHLEQVYGYKFNDFGAIVAAAALA 115 (444)
T ss_dssp HHHHHSHHHHHGGGCBCSCC---CCCCCBHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 28876897760656771550799987717216999999999999999998887735103320232346367899999987
Q ss_pred HHH
Q ss_conf 767
Q T0615 62 HDV 64 (179)
Q Consensus 62 HDv 64 (179)
||+
T Consensus 116 HDi 118 (444)
T 3bg2_A 116 HDI 118 (444)
T ss_dssp TTT
T ss_pred HCC
T ss_conf 315
No 27
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3hc8_A* 3hdz_A* 1t9r_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* 3jwq_A* 3jwr_A*
Probab=50.23 E-value=10 Score=16.24 Aligned_cols=51 Identities=24% Similarity=0.392 Sum_probs=28.8
Q ss_pred CCCH--HHHHHHHHHHH----HHHCC---CCC---HHHHHHHHHHHHHHHCCCH-------HHHHHHHCCH
Q ss_conf 8725--68889999999----97103---688---9999999997677514512-------8899985188
Q T0615 30 ETPY--VNHVINVSTIL----SVEAC---ITD---EGVLMAALLHDVVEDTDAS-------FEDVEKLFGP 81 (179)
Q Consensus 30 ~~PY--~~H~~~Va~il----~~~~~---~~D---~~~i~AalLHDvvEDt~~t-------~~~l~~~FG~ 81 (179)
+.|| +.|...|+..+ ...+. -.+ -..++||+.||+-=. +++ ...+...||+
T Consensus 97 ~vpYHN~~HA~dV~q~~~~lL~~~~~~~~l~~~e~~alliAal~HDv~Hp-G~nN~fli~~~s~La~lYnd 166 (347)
T 1tbf_A 97 NVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHP-GVSNQFLINTNSELALMYND 166 (347)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCC-SSCHHHHHHTTCHHHHHTTT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC-CCCHHHHHHCCCHHHHHHCC
T ss_conf 99872699999999999999975786656999999999999885056999-98788999739878998299
No 28
>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 2o8h_A* 2ovv_A* 2ovy_A*
Probab=42.60 E-value=13 Score=15.66 Aligned_cols=62 Identities=21% Similarity=0.350 Sum_probs=34.4
Q ss_pred CCCCCCCCHH--HHHHHHHHHHH----HHCCCC-C---HHHHHHHHHHHHHHHCCC------HHHHHHHHCCHHHHHH
Q ss_conf 5788887256--88899999999----710368-8---999999999767751451------2889998518889999
Q T0615 25 RKDPQETPYV--NHVINVSTILS----VEACIT-D---EGVLMAALLHDVVEDTDA------SFEDVEKLFGPDVCGL 86 (179)
Q Consensus 25 rk~g~~~PY~--~H~~~Va~il~----~~~~~~-D---~~~i~AalLHDvvEDt~~------t~~~l~~~FG~~Va~l 86 (179)
++++.+.||- .|.+.|+.-+- ..+... + ...++||+.||+-=.+-. +...+...|++.|.+-
T Consensus 71 ~~~Y~~~pYHN~~HA~dV~q~~~~~L~~~~~~l~~~E~~alliAal~HDv~H~G~~N~f~~~~~s~La~lyn~SvLE~ 148 (331)
T 2our_A 71 KKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPLAALYSTSTMEQ 148 (331)
T ss_dssp HHTSCSCSSSSHHHHHHHHHHHHHHHHTTGGGSCHHHHHHHHHHHHHTTTTCCSCCHHHHHHTTCHHHHHSCSSHHHH
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHCCCCHHHH
T ss_conf 971799998078999999999999982787569989999999999971269999998888871883898739966889
No 29
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=41.19 E-value=14 Score=15.36 Aligned_cols=42 Identities=29% Similarity=0.501 Sum_probs=24.4
Q ss_pred CCCCCCCCHH--HHHHHHHHHHH----HHCC--CC-C---HHHHHHHHHHHHHH
Q ss_conf 5788887256--88899999999----7103--68-8---99999999976775
Q T0615 25 RKDPQETPYV--NHVINVSTILS----VEAC--IT-D---EGVLMAALLHDVVE 66 (179)
Q Consensus 25 rk~g~~~PY~--~H~~~Va~il~----~~~~--~~-D---~~~i~AalLHDvvE 66 (179)
++++.+.||- .|...|+..+- ..+. .. + ...++||+.||+-=
T Consensus 91 ~~~Y~~nPYHN~~HA~dV~q~~~~lL~~~~~~~~l~~~E~~alliAal~HDv~H 144 (359)
T 2r8q_A 91 RRRYRRVPYHNFYHVVDVCQTLHTYLYTGKASELLTELECYVLLVTALVHDLDH 144 (359)
T ss_dssp HHTCCSCSSSSHHHHHHHHHHHHHHHHTSCGGGGSCHHHHHHHHHHHHHTTTTC
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 974899998178999999999999997366201199899999999999736799
No 30
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, structural genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=37.94 E-value=14 Score=15.49 Aligned_cols=98 Identities=11% Similarity=0.037 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHHHCC---------CCC-HHHHHHHHHHHHHH--------H--CCCH-HHHHHHHCCHHHHHHHHHH
Q ss_conf 256888999999997103---------688-99999999976775--------1--4512-8899985188899999970
Q T0615 32 PYVNHVINVSTILSVEAC---------ITD-EGVLMAALLHDVVE--------D--TDAS-FEDVEKLFGPDVCGLVREV 90 (179)
Q Consensus 32 PY~~H~~~Va~il~~~~~---------~~D-~~~i~AalLHDvvE--------D--t~~t-~~~l~~~FG~~Va~lV~~l 90 (179)
.++.|.+.+|........ ..| ++...||+|||+=. + ...+ .+...+.||..-..+=..+
T Consensus 117 ~~w~~s~~~A~~a~~la~~~~~~~~~~~~~~~~a~~aGLLhdiG~l~l~~~~~~~~~~~~~~~~e~~~~g~~h~~ig~~l 196 (281)
T 3i7a_A 117 EVWRTSIDVTAAACSLLQIYNKKHPGSGLNYDTLTLAGLVHNIGALPVLTEAEAHPEMFTTIEHLRSLVRKMQGPIGRAV 196 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCCCCHHHHHHHHHHTTTTHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHH
T ss_conf 99999999999999999996234753313699999855153014899988858767644679999998652278999999
Q ss_pred CCCCCCCHHHHHHHHHHH----HHHCCHHHHHHHHHHHHHHHH
Q ss_conf 144457836899999999----875688998989998986888
Q T0615 91 TDDKSLEKQERKRLQIEN----AAKSSCRAKLIKLADKLDNLR 129 (179)
Q Consensus 91 T~~~~~~~~~~~~~~~~~----~~~~d~~v~lIKLADrl~Nlr 129 (179)
-+.=++|..-...-..-+ .......+.+|.+|+.+.+..
T Consensus 197 ~~~W~lp~~i~~~i~~hh~~~~~~~~~~~~~iv~lA~~~~~~~ 239 (281)
T 3i7a_A 197 LKSWDFAPEVMEVVERWADLPYLGDHVSYLDFIRAAAFYTGEL 239 (281)
T ss_dssp HHHTTCCHHHHHHHHHTTCTTCCCSSCCHHHHHHHHHHHHTSS
T ss_pred HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9875999999999998708554775312999999999998653
No 31
>1vqr_A Hypothetical protein CJ0248; 6967725, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=36.20 E-value=17 Score=14.87 Aligned_cols=33 Identities=12% Similarity=0.069 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHCCCCC----HHHHHHHHHHHHH
Q ss_conf 56888999999997103688----9999999997677
Q T0615 33 YVNHVINVSTILSVEACITD----EGVLMAALLHDVV 65 (179)
Q Consensus 33 Y~~H~~~Va~il~~~~~~~D----~~~i~AalLHDvv 65 (179)
|+.|...+|.+++......+ .++..||+|||+=
T Consensus 125 ~w~~s~~~a~~~~~~~~~~~~~~~~~a~~aGLLhdiG 161 (297)
T 1vqr_A 125 FLKTCNEEATFIANWLNDEDKKLSHLLVPCAMLLRLG 161 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
T ss_conf 9999789999999998762542689999867775302
No 32
>3m1t_A Putative phosphohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE GOL; 1.62A {Shewanella amazonensis}
Probab=35.29 E-value=18 Score=14.78 Aligned_cols=100 Identities=19% Similarity=0.201 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHHH---HHHCCCCCHHHHHHHHHHHHHHH------------------CCCHHHHHH-HHCCHHHHHHHH
Q ss_conf 72568889999999---97103688999999999767751------------------451288999-851888999999
Q T0615 31 TPYVNHVINVSTIL---SVEACITDEGVLMAALLHDVVED------------------TDASFEDVE-KLFGPDVCGLVR 88 (179)
Q Consensus 31 ~PY~~H~~~Va~il---~~~~~~~D~~~i~AalLHDvvED------------------t~~t~~~l~-~~FG~~Va~lV~ 88 (179)
..++.|.+.||.+. +.......+++..+|+|||+=+= .+.+..+++ +.||..-..+-.
T Consensus 104 ~~~w~~s~~~A~~a~~la~~~~~~~~~a~~aGLLhdiG~l~l~~~~~~~~~~~~~~~~~~~~~~~~E~~~~g~~h~~ig~ 183 (275)
T 3m1t_A 104 ADFWGNTFEVAIICQELAKRLGTLPEEAFTCGILHSIGELLIVNGDPAVAATISAAVADGADRNLMEKELLGYDNAEIGA 183 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTHHHHHHHHHCHHHHHHHHHHHHTTCCHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
T ss_conf 99999999999999999886024789999988998999999987757889999998727998899999997878999999
Q ss_pred HHCCCCCCCHHHHHHHHHHH----HHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 70144457836899999999----8756889989899989868888
Q T0615 89 EVTDDKSLEKQERKRLQIEN----AAKSSCRAKLIKLADKLDNLRD 130 (179)
Q Consensus 89 ~lT~~~~~~~~~~~~~~~~~----~~~~d~~v~lIKLADrl~Nlr~ 130 (179)
.+.+.=++|..-...-..-+ ....+.-+.+|.+||.+.+...
T Consensus 184 ~l~~~W~lP~~i~~~i~~hh~p~~~~~~~~l~~~v~lA~~i~~~~~ 229 (275)
T 3m1t_A 184 LLAQSWKFTPHLVKGIQFQNHPKSAEPYSKLAGMLAMAKQIAADWD 229 (275)
T ss_dssp HHHHHTTCCHHHHHHHHTTTCGGGCSSCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9999839979999999986594558888779999999999997378
No 33
>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphodiesterase 9A; crystallography, phophodiestrase, enzyme mechanism, alternative splicing, hydrolase; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A*
Probab=33.23 E-value=16 Score=15.14 Aligned_cols=39 Identities=18% Similarity=0.318 Sum_probs=22.7
Q ss_pred CCCCCHH--HHHHHHHHHH----HHHCC---CCC---HHHHHHHHHHHHHH
Q ss_conf 8887256--8889999999----97103---688---99999999976775
Q T0615 28 PQETPYV--NHVINVSTIL----SVEAC---ITD---EGVLMAALLHDVVE 66 (179)
Q Consensus 28 g~~~PY~--~H~~~Va~il----~~~~~---~~D---~~~i~AalLHDvvE 66 (179)
+.+.||- .|.+.|+..+ ...+. -.+ -..++||+.||+-=
T Consensus 69 Y~~npYHN~~HA~dV~q~~~~ll~~~~~~~~l~~~e~~alliAAl~HDv~H 119 (329)
T 3dyn_A 69 YRNNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILMTAAICHDLDH 119 (329)
T ss_dssp SCCCSSSSHHHHHHHHHHHHHHHHHTTHHHHSCHHHHHHHHHHHHHTTTTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 799998179999999999999998527333389899999999999844799
No 34
>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A
Probab=32.87 E-value=16 Score=15.12 Aligned_cols=54 Identities=17% Similarity=0.271 Sum_probs=29.9
Q ss_pred CCCCCCCHH--HHHHHHHHHH----HHHCC--CCC----HHHHHHHHHHHHHHHCCCH-------HHHHHHHCC
Q ss_conf 788887256--8889999999----97103--688----9999999997677514512-------889998518
Q T0615 26 KDPQETPYV--NHVINVSTIL----SVEAC--ITD----EGVLMAALLHDVVEDTDAS-------FEDVEKLFG 80 (179)
Q Consensus 26 k~g~~~PY~--~H~~~Va~il----~~~~~--~~D----~~~i~AalLHDvvEDt~~t-------~~~l~~~FG 80 (179)
+++.+.||- .|.+.|+..+ ...+. ..+ -..++||+.||+-=.+ ++ ...+...||
T Consensus 74 ~~Y~~~pYHN~~HA~dV~q~~~~ll~~~~~~~~l~~~e~~alliAal~HDv~HpG-~~N~fl~~~~s~LA~~Y~ 146 (345)
T 3itu_A 74 KGYRDPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHRG-TNNSFQVASKSVLAALYS 146 (345)
T ss_dssp HTCCCCSSSSHHHHHHHHHHHHHHHHHHCGGGTSCHHHHHHHHHHHHHTTTTCCS-CCHHHHHHTTCHHHHHHT
T ss_pred HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC-CCHHHHHHCCCHHHHHHC
T ss_conf 6279998736999999999999999636854337889999999999971468998-768999864877888846
No 35
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus}
Probab=32.09 E-value=20 Score=14.45 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHHHC---CCCC-HHHHHHHHHHHHH
Q ss_conf 25688899999999710---3688-9999999997677
Q T0615 32 PYVNHVINVSTILSVEA---CITD-EGVLMAALLHDVV 65 (179)
Q Consensus 32 PY~~H~~~Va~il~~~~---~~~D-~~~i~AalLHDvv 65 (179)
-|+.|.+.||.+..... ...| +++..+|+|||+=
T Consensus 108 ~~w~hs~~~A~~a~~lA~~~~~~~~e~a~~~gLLhdiG 145 (288)
T 3ljx_A 108 AYWQKSLARAVALQSITAQASTVAPKEAFTLGLLADVG 145 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSSSCHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999983998888998888884413
No 36
>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 2k31_A*
Probab=29.25 E-value=22 Score=14.15 Aligned_cols=56 Identities=21% Similarity=0.259 Sum_probs=30.2
Q ss_pred CCCH--HHHHHHHHHHHHHHCCC------C-C---HHHHHHHHHHHHHHHCC------CHHHHHHHHCCHHHHH
Q ss_conf 8725--68889999999971036------8-8---99999999976775145------1288999851888999
Q T0615 30 ETPY--VNHVINVSTILSVEACI------T-D---EGVLMAALLHDVVEDTD------ASFEDVEKLFGPDVCG 85 (179)
Q Consensus 30 ~~PY--~~H~~~Va~il~~~~~~------~-D---~~~i~AalLHDvvEDt~------~t~~~l~~~FG~~Va~ 85 (179)
+.|| +.|.+.|+..+-..-.. . + -..++||+.||+-=.+- -+...+...|+..|.+
T Consensus 612 ~~pyHN~~Ha~dv~q~~~~~l~~~~~~~~~~~~e~~all~aal~HD~~H~G~~N~f~~~~~~~la~~y~~svlE 685 (878)
T 3bjc_A 612 NVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVNNSYIQRSEHPLAQLYCHSIME 685 (878)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCCCTTCCTGGGSSCTTHHHHCTTHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCCCHHH
T ss_conf 99872699999999999999852370213999999999999983257999988789985388889881980678
No 37
>3ibj_A CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE2A, GAF-domains, allosteric regulation, alternative splicing, hydrolase, membrane, polymorphism; 3.02A {Homo sapiens}
Probab=27.88 E-value=21 Score=14.39 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=24.4
Q ss_pred CCCCCCCHH--HHHHHHHHHHHHH----CC--CCC----HHHHHHHHHHHHHHH
Q ss_conf 788887256--8889999999971----03--688----999999999767751
Q T0615 26 KDPQETPYV--NHVINVSTILSVE----AC--ITD----EGVLMAALLHDVVED 67 (179)
Q Consensus 26 k~g~~~PY~--~H~~~Va~il~~~----~~--~~D----~~~i~AalLHDvvED 67 (179)
+++.+.||- .|...|+..+... +. ..+ ...++||+.||+-=.
T Consensus 435 ~~y~~~pyHN~~Ha~dv~q~~~~~l~~~~~~~~~~~~e~~a~~~aal~HD~~H~ 488 (691)
T 3ibj_A 435 KGYRDPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHR 488 (691)
T ss_dssp HTSBCCSSSBHHHHHHHHHHHHHHHHHHTGGGTSCHHHHHHHHHHHHHTTTTCC
T ss_pred HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 556899883789999999999999971687432687999999999972677999
No 38
>2ae8_A IGPD, imidazoleglycerol-phosphate dehydratase; beta-alpha-beta sandwich, duplication of A half-domain; 2.01A {Staphylococcus aureus subsp} SCOP: d.14.1.9 d.14.1.9
Probab=23.77 E-value=3.3 Score=19.43 Aligned_cols=49 Identities=12% Similarity=0.226 Sum_probs=28.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH----HHHHHHHHCCCHHHH-HHHHCCH
Q ss_conf 8872568889999999971036889999999----997677514512889-9985188
Q T0615 29 QETPYVNHVINVSTILSVEACITDEGVLMAA----LLHDVVEDTDASFED-VEKLFGP 81 (179)
Q Consensus 29 ~~~PY~~H~~~Va~il~~~~~~~D~~~i~Aa----lLHDvvEDt~~t~~~-l~~~FG~ 81 (179)
++.||+.|.+. .++.+++ .|-.+-+-+ =-|-++||+..++.+ +.+.+|+
T Consensus 58 TGi~FlDHML~---~~a~Hg~-~dL~v~a~GDl~vD~HHtvEDvgI~LG~al~~ALGd 111 (221)
T 2ae8_A 58 TGVGFLNHMLT---LFTFHSG-LSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKD 111 (221)
T ss_dssp CSCHHHHHHHH---HHHHHHC-CEEEEEEECC----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHH---HHHHHCC-CCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHH
T ss_conf 69856999999---9999779-988999863577676504236666799999988774
No 39
>2f1d_A IGPD 1, imidazoleglycerol-phosphate dehydratase 1; herbicide, manganese, X-RAY crystallography, histidine biosynthesis, lyase; 3.00A {Arabidopsis thaliana} SCOP: d.14.1.9 d.14.1.9
Probab=22.90 E-value=3.3 Score=19.37 Aligned_cols=49 Identities=20% Similarity=0.285 Sum_probs=29.2
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH----HHHHHHHCCCHHHHH-HHHCCH
Q ss_conf 88725688899999999710368899999999----976775145128899-985188
Q T0615 29 QETPYVNHVINVSTILSVEACITDEGVLMAAL----LHDVVEDTDASFEDV-EKLFGP 81 (179)
Q Consensus 29 ~~~PY~~H~~~Va~il~~~~~~~D~~~i~Aal----LHDvvEDt~~t~~~l-~~~FG~ 81 (179)
++.||+.|.+. .++.+++ .|-.+.+-+= -|-++||+...+.+- .+..|+
T Consensus 40 Tgi~FlDHML~---~~a~H~~-~dl~v~a~GDl~vD~HHtvEDvgI~LG~al~~aLgd 93 (207)
T 2f1d_A 40 SGIPFLDHMLD---QLASHGL-FDVHVRATGDVHIDDHHTNEDIALAIGTALLKALGE 93 (207)
T ss_dssp CSCHHHHHHHH---HHHHHHT-CEEEEEEECCTTTCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHH---HHHHHCC-CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 79826999999---9999768-988999976788788760888899999999998557
No 40
>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo sapiens} SCOP: a.211.1.2 PDB: 1soj_A*
Probab=21.79 E-value=31 Score=13.28 Aligned_cols=20 Identities=20% Similarity=0.308 Sum_probs=13.6
Q ss_pred CCCCCCCHH--HHHHHHHHHHH
Q ss_conf 788887256--88899999999
Q T0615 26 KDPQETPYV--NHVINVSTILS 45 (179)
Q Consensus 26 k~g~~~PY~--~H~~~Va~il~ 45 (179)
+++.+.||- .|...|+..+-
T Consensus 76 ~~Y~~nPYHN~~HA~dV~q~~~ 97 (420)
T 1so2_A 76 NGYRDIPYHNRIHATDVLHAVW 97 (420)
T ss_dssp TTSCSCSSSSHHHHHHHHHHHH
T ss_pred HHCCCCCCCCHHHHHHHHHHHH
T ss_conf 8579999827899999999999
No 41
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=20.30 E-value=33 Score=13.09 Aligned_cols=50 Identities=16% Similarity=0.343 Sum_probs=27.5
Q ss_pred CCH--HHHHHHHHHHH----HHHCCC--C-C---HHHHHHHHHHHHHHHCCCHH-------HHHHHHCCH
Q ss_conf 725--68889999999----971036--8-8---99999999976775145128-------899985188
Q T0615 31 TPY--VNHVINVSTIL----SVEACI--T-D---EGVLMAALLHDVVEDTDASF-------EDVEKLFGP 81 (179)
Q Consensus 31 ~PY--~~H~~~Va~il----~~~~~~--~-D---~~~i~AalLHDvvEDt~~t~-------~~l~~~FG~ 81 (179)
.|| +.|...|+..+ ...+.. . + ...++||+.||+-=. ++|- ..+...||+
T Consensus 79 nPYHN~~HA~dV~q~~~~lL~~~~~~~~l~~~E~~alliAAl~HD~~Hp-G~~N~fli~~~~~LA~lYnd 147 (365)
T 1taz_A 79 NPYHNQIHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHT-GTTNSFHIQTKSECAIVYND 147 (365)
T ss_dssp CSSSSHHHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCC-SSCHHHHHHHTCHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC-CCCHHHHHHCCCHHHHHCCC
T ss_conf 8754599999999999999970461122899999999999998715889-96577898558768886499
Done!