Query T0620 INPPL1B, Homo Sapiens, 312 residues
Match_columns 312
No_of_seqs 117 out of 1623
Neff 9.6
Searched_HMMs 15564
Date Thu Jul 22 15:15:08 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0620.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0620.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i9za_ d.151.1.2 (A:) Synapto 100.0 0 0 430.5 27.8 283 2-311 22-318 (345)
2 d2imqx1 d.151.1.2 (X:3-282) Sa 100.0 0 0 312.9 25.2 273 2-310 2-280 (280)
3 d1akoa_ d.151.1.1 (A:) DNA-rep 100.0 4.4E-33 2.8E-37 207.5 8.7 252 8-307 2-267 (268)
4 d1hd7a_ d.151.1.1 (A:) DNA rep 99.9 4.2E-25 2.7E-29 161.2 18.5 257 2-308 16-275 (275)
5 d1vyba_ d.151.1.1 (A:) Endonuc 99.9 3.6E-23 2.3E-27 150.0 15.5 231 6-307 5-236 (236)
6 d2ddra1 d.151.1.3 (A:7-305) Sp 99.9 4.9E-22 3.1E-26 143.4 18.3 173 3-194 2-195 (299)
7 d1zwxa1 d.151.1.3 (A:41-333) S 99.9 4.8E-22 3.1E-26 143.5 16.7 174 2-194 2-195 (293)
8 d1wdua_ d.151.1.1 (A:) Endonuc 99.8 7.7E-20 5E-24 130.7 16.8 225 5-309 3-227 (228)
9 d1akoa_ d.151.1.1 (A:) DNA-rep 99.8 5.3E-19 3.4E-23 125.9 18.1 253 8-307 2-267 (268)
10 d2a40b1 d.151.1.1 (B:1-260) De 99.7 3.7E-17 2.4E-21 115.2 11.7 167 7-194 1-174 (260)
11 d2f1na1 d.151.1.1 (A:1-250) Cy 99.7 3.1E-16 2E-20 109.8 9.9 155 7-192 5-178 (250)
12 d1sr4b_ d.151.1.1 (B:) Cytolet 99.6 7.1E-15 4.6E-19 101.9 10.2 158 8-192 6-181 (261)
No 1
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00 E-value=0 Score=430.55 Aligned_cols=283 Identities=29% Similarity=0.538 Sum_probs=250.1
Q ss_pred CCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCC-C-----------HHHHHHHHHHH
Q ss_conf 97379999986157727701234554232101001345205789889997214787-7-----------78999999998
Q T0620 2 PDMISVFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSV-G-----------DREWLDLLRGG 69 (312)
Q Consensus 2 p~~l~v~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~-~-----------~~~~~~~~~~~ 69 (312)
...|+|+|+||||||.+|+.++.+||... ....||||||||||+.. . .+.|...+...
T Consensus 22 ~~~l~I~v~TWNv~~~~~~~~l~~~l~~~----------~~~~~DI~viglQEi~~~~~~~~~~~~~~~~~~w~~~~~~~ 91 (345)
T d1i9za_ 22 HKNVKIFVASYNLNGCSATTKLENWLFPE----------NTPLADIYVVGFQEIVQLTPQQVISADPAKRREWESCVKRL 91 (345)
T ss_dssp EEEEEEEEEEEECTTCCCCSCCHHHHSCS----------SSCCCSEEEEEEECSSCCC-----CCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEECCCCCCCCCCHHHHHCCC----------CCCCCCEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 77318999998679963880568764667----------88999999997624773632231036742467899999875
Q ss_pred HHH--CCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCC
Q ss_conf 753--178508998314754026788852532011244551321342687566878389999984828999971047787
Q T0620 70 LKE--LTDLDYRPIAMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGN 147 (312)
Q Consensus 70 l~~--~~~~~y~~~~~~~~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~~~~i~~in~hl~a~~ 147 (312)
+.. .....|..+.+.+++|++++||+|+++.+.++.+..+.+++|++|.++|||+|++++.++++.++|+|+|||||+
T Consensus 92 ~~~~~~~~~~Y~~v~~~~~~g~~l~vf~r~~~~~~i~~v~~~~~~~g~~g~~gnKGaV~vr~~i~~t~l~fvn~HL~ag~ 171 (345)
T d1i9za_ 92 LNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVSGNKGAVAIRFDYEDTGLCFITSHLAAGY 171 (345)
T ss_dssp HHHTCCSSCCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECCCC----CCEEEEEEEEETTEEEEEEEEECCCCS
T ss_pred CCCCCCCCCCEEEEEEECCCCCEEEEEECCHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCC
T ss_conf 35011679984899973106708999982511155653126789657688536886499999998999999970466766
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 40146789999999873000344455665300464477545654546773689987302460146676656799862541
Q T0620 148 EKTARRNQNYLDILRLLSLGDRQLNAFDISLRFTHLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKV 227 (312)
Q Consensus 148 ~~~~~R~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~GD~N~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 227 (312)
.+.++|+.++..|++.+.+... +.+...+++||+||||||++++.....+.+...++..|+++||+..++..+..
T Consensus 172 ~~~~~R~~~~~~i~~~l~~~~~-----~~~~~~d~v~~~GDlN~R~~~~~~~~~~~i~~~~~~~l~~~dql~~~~~~~~~ 246 (345)
T d1i9za_ 172 TNYDERDHDYRTIASGLRFRRG-----RSIFNHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKV 246 (345)
T ss_dssp SCHHHHHHHHHHHHHHCCCGGG-----CCTTSSSEEEEEEECCCCBSSCHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSS
T ss_pred CCHHHHHHHHHHHHHHHCCCCC-----CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 3067788789999986113556-----55456752699623231346751666765422426678899998765543471
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf 14332488853662476487888653434567766667772301466641754403787400027767689855799997
Q T0620 228 FLRFSEEEISFPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPETHIICNSYGCTDDIVTSDHSPVFGTFE 307 (312)
Q Consensus 228 ~~~~~e~~i~F~ptyk~~~~~~~~~t~~~~~~~~~~~r~p~w~DRIly~~~~~~~~~~~~y~~~~~~~~SDH~PV~a~f~ 307 (312)
|.+|.|++|+|+|||||..++..+.+ +.++|+|||||||||+. .+.+..|.++ ++..|||+||+|+|+
T Consensus 247 ~~~~~E~~I~F~PTyk~~~~~~~yd~-------~~k~RiPsWcDRIL~~~----~~~~~~Y~s~-~~~~SDH~PV~a~f~ 314 (345)
T d1i9za_ 247 FPFFSELPITFPPTYKFDIGTDIYDT-------SDKHRVPAWTDRILYRG----ELVPHSYQSV-PLYYSDHRPIYATYE 314 (345)
T ss_dssp STTCBCCCCCSCCCBCBCTTSSCBCC-------STTCCCCBCCEEEEEES----SCEEEEEEEC-CCCSSSBCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCCC-------CCCEECCCCCCEEEEEC----CEEEEEEECC-CCCCCCCCCEEEEEE
T ss_conf 44740388789999807789876677-------78814724336598637----6256466036-877888446899999
Q ss_pred EEEC
Q ss_conf 7760
Q T0620 308 VGVT 311 (312)
Q Consensus 308 l~v~ 311 (312)
++|+
T Consensus 315 v~v~ 318 (345)
T d1i9za_ 315 ANIV 318 (345)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 9988
No 2
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]}
Probab=100.00 E-value=0 Score=312.89 Aligned_cols=273 Identities=21% Similarity=0.366 Sum_probs=216.5
Q ss_pred CCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCH------HHHHHHHHHHHHHCCC
Q ss_conf 9737999998615772770123455423210100134520578988999721478777------8999999998753178
Q T0620 2 PDMISVFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGD------REWLDLLRGGLKELTD 75 (312)
Q Consensus 2 p~~l~v~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~------~~~~~~~~~~l~~~~~ 75 (312)
|.+++|+|+||||||++++.++..|+ .++...+|||+||||||++... ..|.......+. .
T Consensus 2 ~~~~~v~I~TwNv~~~~~~~~~~~~l----------~~i~~~~pDI~vI~lQE~~~~~~~~~~~~~~~~~~~~~~~---~ 68 (280)
T d2imqx1 2 PAQLSVHTVSWNSGHERAPTNLEELL----------GLNSGETPDVIAVAVQGFGFQTDKPQQGPACVKNFQSLLT---S 68 (280)
T ss_dssp CSEEEEEEEEEEEETCCCCSCCHHHH----------TCTTSCCCSEEEEEEEESCTTTCTTCCHHHHHHHHHHHHH---H
T ss_pred CCCEEEEEEEECCCCCCCCCCHHHHH----------CCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC---C
T ss_conf 97259999988889973872889885----------6244689898999707368561136234899999998724---4
Q ss_pred CEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCHHHHHH
Q ss_conf 50899831475402678885253201124455132134268756687838999998482899997104778740146789
Q T0620 76 LDYRPIAMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQ 155 (312)
Q Consensus 76 ~~y~~~~~~~~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~~~~i~~in~hl~a~~~~~~~R~~ 155 (312)
..|..+...+++++|+++|+|.++.... ........+.++.++++|++.+++.+.+..+.++|+|++++.....+|..
T Consensus 69 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~i~~~~~~~in~hl~~~~~~~~~~~~ 146 (280)
T d2imqx1 69 KGYTKLKNTITETMGLTVYCLEKHLDQN--TLKNETIIVTVDDQKKSGGIVTSFTIYNKRFSFTTSRMSDEDVTSTNTKY 146 (280)
T ss_dssp TTEEEEEEEECSSEEEEEEEEGGGCCTT--TCCCEEEEEECSTTSCSEEEEEEEEETTEEEEEEEEECCTTCCCTTSSSS
T ss_pred CCEEEEEEEEEECEEEEEEECCCCCCCC--EECCEEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCHHHHHHHH
T ss_conf 8715898610203179999726544554--00221675047755677589999999999999634567866036788988
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999987300034445566530046447754565454677368998730246014667665679986254114332488
Q T0620 156 NYLDILRLLSLGDRQLNAFDISLRFTHLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEE 235 (312)
Q Consensus 156 ~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~GD~N~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~e~~ 235 (312)
+ .............++++||+||||++...................++..+++.... ....|.+|.|.+
T Consensus 147 ~----------~~~~~~~~~~~~~~~~vi~~GD~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 215 (280)
T d2imqx1 147 A----------YDTRLDYSKKDDPSDFLFWIGDLNVRVETNATHAKSLVDQNNIDGLMAFDQLKKAK-EQKLFDGWTEPQ 215 (280)
T ss_dssp S----------CCGGGCTTSSSSCCSEEEEEEECSCCBCSCHHHHHHHHHTTCHHHHHTTBTHHHHH-HTTSSTTCBCCC
T ss_pred H----------HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH-HCCHHHCCCCCC
T ss_conf 7----------77766555412677726872245444455627777664213302168999998753-212521553699
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEE
Q ss_conf 853662476487888653434567766667772301466641754403787400027767689855799997776
Q T0620 236 ISFPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPETHIICNSYGCTDDIVTSDHSPVFGTFEVGV 310 (312)
Q Consensus 236 i~F~ptyk~~~~~~~~~t~~~~~~~~~~~r~p~w~DRIly~~~~~~~~~~~~y~~~~~~~~SDH~PV~a~f~l~v 310 (312)
..|.++|++..+.+.++ ..|+|||||||||.......+++..|++++++.+|||+||+|+|+|+|
T Consensus 216 ~~ft~~~~~~~~~~~~~----------~~Rip~~iD~Il~~~~~~~~v~~~~y~~~~~~~~SDH~PV~a~F~l~~ 280 (280)
T d2imqx1 216 VTFKPTYKFKPNTDEYD----------LSATPSWTDRALYKSGTGKTIQPLSYNSLTNYKQTEHRPVLAKFRVTL 280 (280)
T ss_dssp CCSCCCBCBCTTSSCBC----------TTSCCBCCEEEEEECSSSCCEEEEEEEECTTCCSSSSCCEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCC----------CCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCHHEEEEEEEEC
T ss_conf 99897433567655678----------863676577799788668951898978889988788830699999979
No 3
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]} SCOP: d1de8a_ d1e9na_ d1dewb_ d1hd7a_ d1dewa_
Probab=99.98 E-value=4.4e-33 Score=207.52 Aligned_cols=252 Identities=16% Similarity=0.135 Sum_probs=144.9
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf 99986157727701234554232101001345205789889997214787778999999998753178508998314754
Q T0620 8 FIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLDYRPIAMQSLW 87 (312)
Q Consensus 8 ~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~ 87 (312)
.|+||||||++. ..+.+.+++...+||| |||||+++.+..++.. .+...++..+. ....+
T Consensus 2 ri~twNvng~~~------------r~~~i~~~i~~~~pDI--i~LQE~~~~~~~~~~~---~~~~~gy~~~~---~~~~~ 61 (268)
T d1akoa_ 2 KFVSFNINGLRA------------RPHQLEAIVEKHQPDV--IGLQETKVHDDMFPLE---EVAKLGYNVFY---HGQKG 61 (268)
T ss_dssp EEEEEECSCGGG------------CHHHHHHHHHHHCCSE--EEEECCCCCGGGCCHH---HHHHTTCEEEE---EEETT
T ss_pred EEEEEECCHHHH------------HHHHHHHHHHHCCCCE--EEEEEEECCHHCCCHH---HHHHCCCEEEE---ECCCC
T ss_conf 689982222788------------8999999999538999--9996554681207879---99744974998---45765
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCEEECCCC-CCCCCCCE-EEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 026788852532011244551321342687-56687838-9999984828999971047787401467899999998730
Q T0620 88 NIKVAVLVKPEHENRISHVSTSSVKTGIAN-TLGNKGAV-GVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLS 165 (312)
Q Consensus 88 ~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~-~~~~kG~v-~i~~~~~~~~i~~in~hl~a~~~~~~~R~~~~~~i~~~~~ 165 (312)
+.|++|++|.++.... .++.+ .....|++ .+.+...+..+.++|+|+|++....+....++ ++.
T Consensus 62 ~~GvaIlsk~~~~~~~---------~~~~~~~~~~~~r~i~~~~~~~~~~~~i~n~y~p~~~~~~~~~~~~~-----k~~ 127 (268)
T d1akoa_ 62 HYGVALLTKETPIAVR---------RGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPIKFPA-----KAQ 127 (268)
T ss_dssp EEEEEEEESSCCSEEE---------ESSTTCCHHHHTTEEEEEEEETTEEEEEEEEECCCCCBTTCTTHHHH-----HHH
T ss_pred CCCCEEEEEECCEEEE---------ECCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHH-----HHH
T ss_conf 3540789860420032---------05555660002707899986224545898753356776542034678-----889
Q ss_pred CCHHH-HHHHHHHHCCCCEEEECCCCCCCCCCH-----HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 00344-455665300464477545654546773-----689987302460146676656799862541143324888536
Q T0620 166 LGDRQ-LNAFDISLRFTHLFWFGDLNYRLDMDI-----QEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEISFP 239 (312)
Q Consensus 166 ~~~~~-~~~~~~~~~~~~v~~~GD~N~~~~~~~-----~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~e~~i~F~ 239 (312)
+.... ....+......++|++||||......+ ..........+. +.++ .+..+|..+.+ .+|.
T Consensus 128 ~~~~l~~~i~~~~~~~~~vIl~GDfN~~~~~~D~~~~~~~~~~~~~~~~~-~~~~--------~er~~~~~~~~--~gl~ 196 (268)
T d1akoa_ 128 FYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKC-SFLP--------EEREWMDRLMS--WGLV 196 (268)
T ss_dssp HHHHHHHHHHHHCCTTSCEEEEEECCCCCSGGGBCSCHHHHHHHHHHTBT-TSCH--------HHHHHHHHHHH--TTEE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCHHHHHHHHCCCCC-CCCC--------HHHHHHHHHHH--HCCC
T ss_conf 99999975333202676268863126876645300532332222005751-0031--------12346887753--1010
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCEEEEEE-ECCCCCEEEEEEEECC----CCCCCCCCCEEEEEE
Q ss_conf 62476487-88865343456776666777230146664-1754403787400027----767689855799997
Q T0620 240 PTYRYERG-SRDTYAWHKQKPTGVRTNVPSWCDRILWK-SYPETHIICNSYGCTD----DIVTSDHSPVFGTFE 307 (312)
Q Consensus 240 ptyk~~~~-~~~~~t~~~~~~~~~~~r~p~w~DRIly~-~~~~~~~~~~~y~~~~----~~~~SDH~PV~a~f~ 307 (312)
|+||...+ ..+.||||+++.+.+.++.+. ||||. .+++...++.++.+.. ...+|||+||.++|+
T Consensus 197 D~~r~~~p~~~~~yT~~~~~~~~~~~~~g~---RID~i~~s~~l~~~~~~~~i~~~~~~~~~~SDH~PV~~~~~ 267 (268)
T d1akoa_ 197 DTFRHANPQTADRFSWFDYRSKGFDDNRGL---RIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFR 267 (268)
T ss_dssp EHHHHHSTTCCSCCSBCCTTTTHHHHTCCB---CCEEEEEEHHHHTTEEEEEECHHHHTSSSCCSBCCEEEEEC
T ss_pred EEEEECCCCCCCCEEECCCCCCCCCCCCCC---EEEEEEECHHHHHHHEEEEEECHHCCCCCCCCCEEEEEEEE
T ss_conf 022210588887267036677760467762---68779867467700102232000126777886112788860
No 4
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=4.2e-25 Score=161.24 Aligned_cols=257 Identities=12% Similarity=0.025 Sum_probs=135.0
Q ss_pred CCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE-
Q ss_conf 9737999998615772770123455423210100134520578988999721478777899999999875317850899-
Q T0620 2 PDMISVFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLDYRP- 80 (312)
Q Consensus 2 p~~l~v~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~~~~y~~- 80 (312)
|..+| |+||||||++.+ .++.+.+++...+||| |||||+++...++...+... .++..+..
T Consensus 16 ~~~mk--i~S~NvnGlr~~-----------~~~~~~~~i~~~~pDI--i~LQE~k~~~~~~~~~~~~~---~~~~~~~~~ 77 (275)
T d1hd7a_ 16 PATLK--ICSWNVDGLRAW-----------IKKKGLDWVKEEAPDI--LCLQETKCSENKLPAELQEL---PGLSHQYWS 77 (275)
T ss_dssp BCCEE--EEEEECSSHHHH-----------HHTTHHHHHHHHCCSE--EEEECCCCCC--------------CCCEEEEE
T ss_pred CCCEE--EEEEEECCHHHH-----------HHCCHHHHHHHCCCCE--EEEECCCCCHHHCCHHHHHC---CCCCEEEEE
T ss_conf 87679--999982568761-----------3435899997589989--99882205823388878716---576435664
Q ss_pred EECCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 83147540267888525320112445513213426875668783899999848289999710477874014678999999
Q T0620 81 IAMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDI 160 (312)
Q Consensus 81 ~~~~~~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~~~~i~~in~hl~a~~~~~~~R~~~~~~i 160 (312)
......+..+++++++........... .......+. ..........+.....|..+..............
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 147 (275)
T d1hd7a_ 78 APSDKEGYSGVGLLSRQCPLKVSYGIG--------DEEHDQEGR-VIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDE- 147 (275)
T ss_dssp CC-----CCCEEEEESSCCSEEEESCS--------CGGGSSSSC-EEEEECSSCEEEEEECCCCCGGGTTHHHHHHHHH-
T ss_pred EECCCCCCCCCCEECCCCCEEEEECCC--------CCCCHHHHH-EEEEEECCEEEEEEEEEECCCCCCCHHHHHHHCC-
T ss_conf 320233334420121568603664233--------453022321-1245531304310245404665410133333100-
Q ss_pred HHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 98730003444556653004644775456545467736899873024601466766567998625411433248885366
Q T0620 161 LRLLSLGDRQLNAFDISLRFTHLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEISFPP 240 (312)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~v~~~GD~N~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~e~~i~F~p 240 (312)
..............++++||+|.....................-.+...+.. +.+ ...|.+
T Consensus 148 --------~~~~~~~~~~~~~~~~~~gd~n~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----------~l~-~~~~~D 208 (275)
T d1hd7a_ 148 --------AFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGE----------LLQ-AVPLAD 208 (275)
T ss_dssp --------HHHHHHHHHHHHSCEEEEEECSCCCSGGGBSCHHHHTTSTTSCHHHHHHHHH----------HHH-HTTCEE
T ss_pred --------CCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCCHHHHCCCCCCCCCCHHHHH----------HHC-CCCCCC
T ss_conf --------2000010012477537611224572334404510121022222211045665----------540-367653
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE-ECCCCCEEEEEEEECCCCCCCCCCCEEEEEEE
Q ss_conf 24764-8788865343456776666777230146664-17544037874000277676898557999977
Q T0620 241 TYRYE-RGSRDTYAWHKQKPTGVRTNVPSWCDRILWK-SYPETHIICNSYGCTDDIVTSDHSPVFGTFEV 308 (312)
Q Consensus 241 tyk~~-~~~~~~~t~~~~~~~~~~~r~p~w~DRIly~-~~~~~~~~~~~y~~~~~~~~SDH~PV~a~f~l 308 (312)
+||.. +.....+|||++...++.++. +| ||||. +++....++.++.+..+..+|||+||.++++|
T Consensus 209 ~~r~~~p~~~~~~t~~~~~~~~~~~~~-g~--RIDyi~vs~~l~~~v~~~~i~~~~~~SDH~PV~v~l~l 275 (275)
T d1hd7a_ 209 SFRHLYPNTPYAYTFWTYMMNARSKNV-GW--RLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL 275 (275)
T ss_dssp HHHHHCTTCTTCCSBCCSGGGHHHHTC-CB--CCEEEEECGGGGGGEEEEEECTTCCSSSBCCEEEEECC
T ss_pred CEEEECCCCCCCEEECCCCCCCCCCCC-CE--EEEEEEECHHHHHHEEEEEECCCCCCCCCCCEEEEEEC
T ss_conf 202403776873023233478641899-76--75799967188612558998789999980057999979
No 5
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=3.6e-23 Score=150.02 Aligned_cols=231 Identities=17% Similarity=0.137 Sum_probs=127.5
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 99999861577277012345542321010013452057898899972147877789999999987531785089983147
Q T0620 6 SVFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLDYRPIAMQS 85 (312)
Q Consensus 6 ~v~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~ 85 (312)
.+.|+||||+|++.+.. ...+.+++...+||| |||||++........ +. .....+.......
T Consensus 5 ~~kv~s~Nv~g~~~~~~----------~~~i~~~i~~~~~DI--i~LQE~~~~~~~~~~-----~~-~~~~~~~~~~~~~ 66 (236)
T d1vyba_ 5 HITILTLNINGLNSAIK----------RHRLASWIKSQDPSV--CCIQETHLTCRDTHR-----LK-IKGWRKIYQANGK 66 (236)
T ss_dssp CEEEEEEECSCCCSHHH----------HHHHHHHHHHHCCSE--EEEECCCCCTTSGGG-----CC-CTTCCEEEEECCS
T ss_pred CEEEEEEECCCCCCHHH----------HHHHHHHHHHCCCEE--EEEECCCCCCCCCHH-----HH-HCCCCEEEEEECC
T ss_conf 86999999289612455----------889999998779859--999835476232634-----54-2254048975101
Q ss_pred CCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCC-CEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 54026788852532011244551321342687566878-38999998482899997104778740146789999999873
Q T0620 86 LWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKG-AVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLL 164 (312)
Q Consensus 86 ~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG-~v~i~~~~~~~~i~~in~hl~a~~~~~~~R~~~~~~i~~~~ 164 (312)
..+.|+++++|.++..... .+. ....| ...+.+...+..+.++|+|++++..... .......+
T Consensus 67 ~~~~g~~i~~k~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~-----~~~~~~~~ 130 (236)
T d1vyba_ 67 QKKAGVAILVSDKTDFKPT-----KIK------RDKEGHYIMVKGSIQQEELTILNIYAPNTGAPRF-----IKQVLSDL 130 (236)
T ss_dssp SSSCCEEEEECTTCCCEEE-----EEE------ECTTSSEEEEEEEETTEEEEEEEEECCSSSHHHH-----HHHHHHHT
T ss_pred CCCCCEEEEEECCCCCCCC-----CCC------CCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHH-----HHHHHHHH
T ss_conf 1222114676036521235-----642------1113431001343136762467741321220788-----87665541
Q ss_pred CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00034445566530046447754565454677368998730246014667665679986254114332488853662476
Q T0620 165 SLGDRQLNAFDISLRFTHLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEISFPPTYRY 244 (312)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~GD~N~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~e~~i~F~ptyk~ 244 (312)
......+++++||||......+.. ....... +....... +. ...+.++||.
T Consensus 131 -----------~~~~~~~~Il~GDfN~~~~~~d~~-----~~~~~~~--~~~~~~~~---------~~--~~~~~d~~r~ 181 (236)
T d1vyba_ 131 -----------QRDLDSHTLIMGDFNTPLSTLDRS-----TRQKVNK--DTQELNSA---------LH--QADLIDIYRT 181 (236)
T ss_dssp -----------TTTCCTTEEEEEECSSCSSGGGBT-----TCCCCCH--HHHHHHHH---------HH--HTTEEEHHHH
T ss_pred -----------CCCCCCEEEEEECCCCCCCHHHHC-----CCCCCHH--HHHHHHHH---------HH--HHHCCCCCCE
T ss_conf -----------134432069963025554334413-----5421103--57889999---------98--6412332110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf 487888653434567766667772301466641754403787400027767689855799997
Q T0620 245 ERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPETHIICNSYGCTDDIVTSDHSPVFGTFE 307 (312)
Q Consensus 245 ~~~~~~~~t~~~~~~~~~~~r~p~w~DRIly~~~~~~~~~~~~y~~~~~~~~SDH~PV~a~f~ 307 (312)
..+....++||....+. .++.|||+ +++....++..+.+.+. ..|||+||.+.++
T Consensus 182 ~~~~~~~~~~~~~~~~~-----~~RiD~il--~s~~~~~~~~~~~i~~~-~~SDH~pv~~~lk 236 (236)
T d1vyba_ 182 LHPKSTEYTFFSAPHHT-----YSKIDHIV--GSKALLSKCKRTEIITN-YLSDHSAIKLELR 236 (236)
T ss_dssp HCTTCCCCSEEETTTTE-----EECCEEEE--EEGGGGGGEEEEEEECC-SSSSSCEEEEEEC
T ss_pred ECCCCCCCCCCCCCCCC-----CCEEEEEE--ECHHHHHHCEEEEECCC-CCCCCCCEEEEEC
T ss_conf 01478643332788997-----76367999--87189722408998999-7998101899959
No 6
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
Probab=99.90 E-value=4.9e-22 Score=143.45 Aligned_cols=173 Identities=17% Similarity=0.086 Sum_probs=96.3
Q ss_pred CEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCE-----
Q ss_conf 737999998615772770123455423210100134520578988999721478777899999999875317850-----
Q T0620 3 DMISVFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLD----- 77 (312)
Q Consensus 3 ~~l~v~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~~~~----- 77 (312)
++|| |+||||..+..+ +.++-....+.+.+.+.+...+||| |||||+..... .+.+...+.......
T Consensus 2 ~tl~--v~s~Nv~~~~~~--~~~~~~~~~r~~~i~~~i~~~~~DI--i~LQEv~~~~~--~~~~~~~l~~~~~~~~~~~~ 73 (299)
T d2ddra1 2 DTLK--VMTHNVYMLSTN--LYPNWGQTERADLIGAADYIKNQDV--VILNEVFDNSA--SDRLLGNLKKEYPNQTAVLG 73 (299)
T ss_dssp CEEE--EEEEEEEECCTT--TCTTSCHHHHHHHHHHCSTTCSCSE--EEEEEECCHHH--HHHHHHHHTTTCCEECCCTT
T ss_pred CCEE--EEEEECCCCCCC--CCCCCCHHHHHHHHHHHHHHCCCCE--EEEECCCCCCH--HHHHHHHHHHHCCCEEEECC
T ss_conf 9669--998778846546--6887278899999999987569988--99992677652--78888888875674033213
Q ss_pred ----------EEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCC
Q ss_conf ----------8998314754026788852532011244551321342687566878389999984828999971047787
Q T0620 78 ----------YRPIAMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGN 147 (312)
Q Consensus 78 ----------y~~~~~~~~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~~~~i~~in~hl~a~~ 147 (312)
+...........|+++++|.+.......... ..+.......++++.+.....+..++++|+|++++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~ 150 (299)
T d2ddra1 74 RSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQYVFA---KGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQAED 150 (299)
T ss_dssp SCCSTTSSEEEESCCTTCSSCCCCEEEESSCEEEEEEEECS---CCC----CCCCEEEEEEEEETTEEEEEEEEECCCC-
T ss_pred CCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEE---CCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCC
T ss_conf 45555554023012343102641699998611131345531---135755434206999998069808999972466787
Q ss_pred CCHHH------HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 40146------789999999873000344455665300464477545654546
Q T0620 148 EKTAR------RNQNYLDILRLLSLGDRQLNAFDISLRFTHLFWFGDLNYRLD 194 (312)
Q Consensus 148 ~~~~~------R~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~GD~N~~~~ 194 (312)
....+ |..+...+... ........+.++|+|||||.+..
T Consensus 151 ~~~~~~~~~~~r~~q~~~~~~~--------~~~~~~~~~~~vi~~GDfN~~~~ 195 (299)
T d2ddra1 151 SMCGKTSPASVRTNQLKEIQDF--------IKNKNIPNNEYVLIGGDMNVNKI 195 (299)
T ss_dssp ------CHHHHHHHHHHHHHHH--------HHHHTCCTTSCEEEEEECCCCCT
T ss_pred CCCCHHHHHHHHHHHHHHHHHH--------HHHHCCCCCCEEEEEECCCCCCC
T ss_conf 7531024688999999987656--------55420256651799723788865
No 7
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]}
Probab=99.89 E-value=4.8e-22 Score=143.52 Aligned_cols=174 Identities=17% Similarity=0.160 Sum_probs=96.7
Q ss_pred CCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCE----
Q ss_conf 9737999998615772770123455423210100134520578988999721478777899999999875317850----
Q T0620 2 PDMISVFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLD---- 77 (312)
Q Consensus 2 p~~l~v~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~~~~---- 77 (312)
|+.||| +||||...+.. +.+......+.+.+...+...+||| |||||+..... .+.+...+.......
T Consensus 2 ~~~lki--~s~Nv~~~~~~--~~~~~~~~~r~~~i~~~i~~~~~DV--i~LQEv~~~~~--~~~l~~~~~~~~~~~~~~~ 73 (293)
T d1zwxa1 2 PGNFKI--TSHNVYLFSRN--IYPNWGQMHRADLIAQADYMKNNDV--VILNEAFDTSA--SHRLLNNLREMYPHQTPVI 73 (293)
T ss_dssp CCSCEE--EEEEEEECCTT--TSTTSCHHHHHHHHHTSGGGSSCSE--EEEEEECSHHH--HHHHHHHTTTTCCEECCCT
T ss_pred CCCCEE--EEEECCCCCCC--CCCCCCHHHHHHHHHHHHHHCCCCE--EEEECCCCCCH--HHHHHHHHHHHCCCEEHHC
T ss_conf 997789--98846857655--5898278999999999997569988--99984677425--8999987765414000001
Q ss_pred ----------EEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCC
Q ss_conf ----------8998314754026788852532011244551321342687566878389999984828999971047787
Q T0620 78 ----------YRPIAMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGN 147 (312)
Q Consensus 78 ----------y~~~~~~~~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~~~~i~~in~hl~a~~ 147 (312)
+...........|+++++|.++......... ..+.......+|.+.+.+...+..+.++|+||+++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~g~~ilsr~pi~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~ 150 (293)
T d1zwxa1 74 GRSKHGWDKTEGNYSNFALEDGGVAVVSQWPIVEKSQHIFQ---RGGGADRLSNKGFAYVKIMKNGKPYHIIGTHTQADD 150 (293)
T ss_dssp TSCSTTCSEEEC-----CCBCCCCEEEESSCEEEEEEEECS---CCCGGGGGBCCEEEEEEEEETTEEEEEEEEECCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEE---CCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCC
T ss_conf 13454322111454432012662699964675442156520---245420013414899999639934799984410367
Q ss_pred CCHHHH------HHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 401467------89999999873000344455665300464477545654546
Q T0620 148 EKTARR------NQNYLDILRLLSLGDRQLNAFDISLRFTHLFWFGDLNYRLD 194 (312)
Q Consensus 148 ~~~~~R------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~GD~N~~~~ 194 (312)
...... ..+...+...+ .........++|++||||....
T Consensus 151 ~~~~~~~~~~~r~~~~~~~~~~~--------~~~~~~~~~~vil~GDfN~~~~ 195 (293)
T d1zwxa1 151 SLISKDTSRAIRAEQMQEIQTFI--------AKKNIPKDEIIFIGGDLNVNYG 195 (293)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHH--------HHHTCCTTSEEEEEEECCCCTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH--------HHHCCCCCCCEEEEEECCCCCC
T ss_conf 75303577999999898865455--------5403688984899806698988
No 8
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}
Probab=99.84 E-value=7.7e-20 Score=130.70 Aligned_cols=225 Identities=16% Similarity=0.080 Sum_probs=118.1
Q ss_pred EEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 79999986157727701234554232101001345205789889997214787778999999998753178508998314
Q T0620 5 ISVFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLDYRPIAMQ 84 (312)
Q Consensus 5 l~v~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~ 84 (312)
|| |+||||++.+.. ...+...+...+||| +||||++...... +....+..+......
T Consensus 3 ~r--V~~~Nv~~~~~~------------~~~l~~~i~~~~~DI--i~lQE~~~~~~~~-------~~~~~~~~~~~~~~~ 59 (228)
T d1wdua_ 3 YR--VLQANLQRKKLA------------TAELAIEAATRKAAI--ALIQEPYVGGAKS-------MKGFRGVRVFQSTAQ 59 (228)
T ss_dssp EE--EEEEECTTCHHH------------HHHHHHHHHHHTCSE--EEEESCCC-------------CCCSSCEEEECCCC
T ss_pred EE--EEEECCCCCHHH------------HHHHHHHHHHCCCCE--EEEECCCCCCCCC-------CCCCCCEEEEECCCC
T ss_conf 78--994203997678------------999999997369978--9998787489885-------311362378834577
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 75402678885253201124455132134268756687838999998482899997104778740146789999999873
Q T0620 85 SLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLL 164 (312)
Q Consensus 85 ~~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~~~~i~~in~hl~a~~~~~~~R~~~~~~i~~~~ 164 (312)
..++.|++++++++....... ......+.+.+.+...+..++++|+|+|.+... +.....+..+
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~~~~~~i~v~~~y~~~~~~~-~~~~~~l~~~---- 123 (228)
T d1wdua_ 60 GDGTVKAAIAVFDHDLDVIQY-----------PQLTTNNIVVVGIRTRAWEITLVSYYFEPDKPI-ESYLEQIKRV---- 123 (228)
T ss_dssp TTCCCCEEEEECCSSCEEEEC-----------TTTCCSSEEEEEEECSSCEEEEEEEECCTTSCS-HHHHHHHHHH----
T ss_pred CCCCCCEEEEEECCCCCEECC-----------CCCCCCCEEEEEEECCCCCEEEEEEEECCCCCC-HHHHHHHHHH----
T ss_conf 898762599998146404504-----------677889979999982880289999981874310-6899999999----
Q ss_pred CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00034445566530046447754565454677368998730246014667665679986254114332488853662476
Q T0620 165 SLGDRQLNAFDISLRFTHLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEISFPPTYRY 244 (312)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~GD~N~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~e~~i~F~ptyk~ 244 (312)
.......+++++||||.....- . ...... ....+........ + ..
T Consensus 124 ----------~~~~~~~~vIi~GDfN~~~~~~-------~-~~~~~~--~~~~l~~~~~~~~-~---~~----------- 168 (228)
T d1wdua_ 124 ----------ERKMGPKRLIFGGDANAKSTWW-------G-SKEDDA--RGDQLMGTLGELG-L---HI----------- 168 (228)
T ss_dssp ----------HHTTCSSSEEEEEECCCCCGGG-------T-CSSCCH--HHHHHHHHHHHHT-C---EE-----------
T ss_pred ----------HHHCCCCEEEEECCCCCCCHHH-------H-CCCCHH--HHHHHHHHHHHHC-C---CC-----------
T ss_conf ----------8745895399922535575667-------3-243205--7899999998607-5---31-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEE
Q ss_conf 48788865343456776666777230146664175440378740002776768985579999777
Q T0620 245 ERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPETHIICNSYGCTDDIVTSDHSPVFGTFEVG 309 (312)
Q Consensus 245 ~~~~~~~~t~~~~~~~~~~~r~p~w~DRIly~~~~~~~~~~~~y~~~~~~~~SDH~PV~a~f~l~ 309 (312)
......++|+..... .+.++++|+|++ ++....++.++.+.++..+|||.||.++++++
T Consensus 169 -~~~~~~~~~~~~~~~---~~~~~rID~~~~--s~~l~~~v~~~~v~~~~~~SDH~~v~~~l~~~ 227 (228)
T d1wdua_ 169 -LNEGDVPTFDTIRGG---KRYQSRVDVTFC--TEDMLDLIDGWRVDEDLVSSDHNGMVFNIRLQ 227 (228)
T ss_dssp -CCCSCCCSEEC--------CCEECCEEEEE--CGGGBTTEEEEEECTTSSSSSBCCEEEEECCC
T ss_pred -CCCCCCCCCCCCCCC---CCCCCCEEEEEE--CCHHHHHCEEEEECCCCCCCCCHHEEEEEEEE
T ss_conf -125773220035678---788854489997--80586213599998999999935769999971
No 9
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]}
Probab=99.83 E-value=5.3e-19 Score=125.86 Aligned_cols=253 Identities=15% Similarity=0.099 Sum_probs=116.0
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf 99986157727701234554232101001345205789889997214787778999999998753178508998314754
Q T0620 8 FIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLDYRPIAMQSLW 87 (312)
Q Consensus 8 ~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~ 87 (312)
.|+||||||++. +.+.+.+++...+||| |||||+++.+..+.... +...++.. ..... ...
T Consensus 2 ki~S~NvnG~r~------------r~~~i~~~i~~~~~DI--i~LQEv~~~~~~~~~~~---~~~~~~~~-~~~~~-~~~ 62 (268)
T d1akoa_ 2 KFVSFNINGLRA------------RPHQLEAIVEKHQPDV--IGLQETKVHDDMFPLEE---VAKLGYNV-FYHGQ-KGH 62 (268)
T ss_dssp EEEEEECSCGGG------------CHHHHHHHHHHHCCSE--EEEECCCCCGGGCCHHH---HHHTTCEE-EEEEE-TTE
T ss_pred EEEEEEECCHHH------------HHHHHHHHHHHCCCCE--EEEEEEECCHHHCCHHH---HHHCCCEE-EECCC-CCC
T ss_conf 899998079998------------4998999998779988--99985656811199888---86569625-53144-344
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCH-HHHHHHHHHHHHHHCC
Q ss_conf 026788852532011244551321342687566878389999984828999971047787401-4678999999987300
Q T0620 88 NIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGNEKT-ARRNQNYLDILRLLSL 166 (312)
Q Consensus 88 ~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~~~~i~~in~hl~a~~~~~-~~R~~~~~~i~~~~~~ 166 (312)
..+.....+........... ....................+.++..+...+.... ..+.........
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 130 (268)
T d1akoa_ 63 YGVALLTKETPIAVRRGFPG--------DDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPIKFPAKAQFYQ---- 130 (268)
T ss_dssp EEEEEEESSCCSEEEESSTT--------CCHHHHTTEEEEEEEETTEEEEEEEEECCCCCBTTCTTHHHHHHHHHH----
T ss_pred CCCCCCCCCCCHHCCCCCCC--------CCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH----
T ss_conf 33432112354000147400--------112354321000000136874799831015786310023167788999----
Q ss_pred CHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHH-----HH--HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 034445566530046447754565454677368-----99--87302460146676656799862541143324888536
Q T0620 167 GDRQLNAFDISLRFTHLFWFGDLNYRLDMDIQE-----IL--NYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEISFP 239 (312)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~GD~N~~~~~~~~~-----~~--~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~e~~i~F~ 239 (312)
.................+++++|......+.. .. .......+.. . ....+..+.+ ..+.
T Consensus 131 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~--~~~~ 196 (268)
T d1akoa_ 131 -NLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLP--E---------EREWMDRLMS--WGLV 196 (268)
T ss_dssp -HHHHHHHHHCCTTSCEEEEEECCCCCSGGGBCSCHHHHHHHHHHTBTTSCH--H---------HHHHHHHHHH--TTEE
T ss_pred -HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCH--H---------HHHHHHHHHC--CCCC
T ss_conf -999999987623886788740113763544432231241000246667898--9---------9999999970--8873
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEC----CCCCCCCCCCEEEEEE
Q ss_conf 62476487-88865343456776666777230146664175440378740002----7767689855799997
Q T0620 240 PTYRYERG-SRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPETHIICNSYGCT----DDIVTSDHSPVFGTFE 307 (312)
Q Consensus 240 ptyk~~~~-~~~~~t~~~~~~~~~~~r~p~w~DRIly~~~~~~~~~~~~y~~~----~~~~~SDH~PV~a~f~ 307 (312)
++|+...+ ....++|+..+..++.++.+.++|+|++ +++...++.++.+. ....+|||+||+|+|+
T Consensus 197 D~~~~~~~~~~~~~~~~~~~~~~~~~~~g~RIDyI~~--s~~l~~~~~~~~i~~~~~~~~~~SDH~PV~a~~~ 267 (268)
T d1akoa_ 197 DTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLA--SQPLAECCVETGIDYEIRSMEKPSDHAPVWATFR 267 (268)
T ss_dssp EHHHHHSTTCCSCCSBCCTTTTHHHHTCCBCCEEEEE--EHHHHTTEEEEEECHHHHTSSSCCSBCCEEEEEC
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE--CHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEE
T ss_conf 3010117876665413577666531799617789996--7289543149999421028999997225799997
No 10
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.72 E-value=3.7e-17 Score=115.16 Aligned_cols=167 Identities=14% Similarity=0.132 Sum_probs=73.8
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECC--
Q ss_conf 999986157727701234554232101001345205789889997214787778999999998753178508998314--
Q T0620 7 VFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDLDYRPIAMQ-- 84 (312)
Q Consensus 7 v~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~-- 84 (312)
+.|+||||+++...+... ......+.+.+ .+||| |||||++.........+...+.......+......
T Consensus 1 lrI~s~Ni~~~~~~~~~~-----~~~~~~l~~~i--~~~DI--i~LQEv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 71 (260)
T d2a40b1 1 LKIAAFNIRTFGETKMSN-----ATLASYIVRIV--RRYDI--VLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYVVSEPL 71 (260)
T ss_dssp CEEEEEEEEEESHHHHHS-----HHHHHHHHHHH--TTCSE--EEEEEECCTTSHHHHHHHHHHTSSSTTSCEEEECCCB
T ss_pred CEEEEEECCCCCCCCCCC-----HHHHHHHHHHC--CCCCE--EEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 989999688347786665-----99999999874--79998--9999623477416999998643114675036741567
Q ss_pred --CCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEC---CEEEEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf --754026788852532011244551321342687566878389999984---828999971047787401467899999
Q T0620 85 --SLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFN---GTSFGFVNCHLTSGNEKTARRNQNYLD 159 (312)
Q Consensus 85 --~~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~---~~~i~~in~hl~a~~~~~~~R~~~~~~ 159 (312)
...+.+.+++.+.................................... ...+.+++.|+.... ...|......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 149 (260)
T d2a40b1 72 GRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFSREPAVVKFSSHSTKVKEFAIVALHSAPSD--AVAEINSLYD 149 (260)
T ss_dssp CSSSCCBEEEEEECTTTCEEEEEEECCTTSTTTHHHHCSSCCEEEEEECTTSSSSEEEEEECCCCGGG--HHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCCCEECCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCH--HHHHHHHHHH
T ss_conf 77754310025412544201112000135556765433323102121103456247999864155430--3688888999
Q ss_pred HHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 99873000344455665300464477545654546
Q T0620 160 ILRLLSLGDRQLNAFDISLRFTHLFWFGDLNYRLD 194 (312)
Q Consensus 160 i~~~~~~~~~~~~~~~~~~~~~~v~~~GD~N~~~~ 194 (312)
+.+.+ .......+++++||||....
T Consensus 150 ~~~~~----------~~~~~~~~~iv~GDfN~~~~ 174 (260)
T d2a40b1 150 VYLDV----------QQKWHLNDVMLMGDFNADCS 174 (260)
T ss_dssp HHHHH----------HHHHCCCCEEEEEECCCSTT
T ss_pred HHHHH----------HHHCCCCCEEECCCCCCCCC
T ss_conf 99999----------86345788797665567865
No 11
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]}
Probab=99.66 E-value=3.1e-16 Score=109.83 Aligned_cols=155 Identities=13% Similarity=0.128 Sum_probs=71.6
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCC------------
Q ss_conf 99998615772770123455423210100134520578988999721478777899999999875317------------
Q T0620 7 VFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELT------------ 74 (312)
Q Consensus 7 v~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~------------ 74 (312)
+.|+||||++...... ..|-. .....+....++|| |||||++......... ...+...+
T Consensus 5 ~rv~TwNi~~~~~~~~-~~~~~-----~~~~~~~~~~~~DV--l~lQEv~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 75 (250)
T d2f1na1 5 FRVATWNLQGASATTE-SKWNI-----NVRQLISGENAVDI--LAVQEAGSPPSTAVDT-GRVIPSPGIPVRELIWNLST 75 (250)
T ss_dssp CCEEEEEEEECTTSCH-HHHHT-----HHHHHHSSTTCCSE--EEEEEECSCCTTCEEC-CCCCCCSSCCCEEEEEECCS
T ss_pred CEEEEEECCCCCCCCC-CCCHH-----HHHHHHHHCCCCCE--EEEECCCCCCCCCHHH-HHHHHHCCCCCEEEEECCCC
T ss_conf 8999994797757655-65559-----99999986689899--9998268633433667-65443027642002321344
Q ss_pred ----CCEEEEE--ECCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCC
Q ss_conf ----8508998--3147540267888525320112445513213426875668783899999848289999710477874
Q T0620 75 ----DLDYRPI--AMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGNE 148 (312)
Q Consensus 75 ----~~~y~~~--~~~~~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~~~~i~~in~hl~a~~~ 148 (312)
...|... .....+..|+++++|.++...... ... ....+..+...+ ..+.++|+|++++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~g~~i~s~~~~~~~~~~---------~~~--~~~~r~~~~~~~--~~~~v~n~Hl~~~~~ 142 (250)
T d2f1na1 76 NSRPQQVYIYFSAVDALGGRVNLALVSNRRADEVFVL---------SPV--RQGGRPLLGIRI--GNDAFFTAHAIAMRN 142 (250)
T ss_dssp SSSSCEEEEEEECSCSSSCSSCEEEEESSCCSEEEEE---------CCS--STTCCCEEEEEE--TTEEEEEEECCSSSS
T ss_pred CCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEC---------CCC--CCCCCCEEEEEE--CEEEEEEEECCCCCC
T ss_conf 5676326787511454465714599988753056751---------787--542211036763--208999998189995
Q ss_pred CHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 0146-7899999998730003444556653004644775456545
Q T0620 149 KTAR-RNQNYLDILRLLSLGDRQLNAFDISLRFTHLFWFGDLNYR 192 (312)
Q Consensus 149 ~~~~-R~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~GD~N~~ 192 (312)
.... +.+....+.+. .........+++++||||..
T Consensus 143 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~iv~GDfN~~ 178 (250)
T d2f1na1 143 NDAPALVEEVYNFFRD---------SRDPVHQALNWMILGDFNRE 178 (250)
T ss_dssp CSHHHHHHHHHHHHHT---------CSSHHHHTCEEEEEEECSSC
T ss_pred HHHHHHHHHHHHHHHH---------HHHHHCCCCCEEEECCCCCC
T ss_conf 6599999999999999---------87641468866873455768
No 12
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]}
Probab=99.58 E-value=7.1e-15 Score=101.92 Aligned_cols=158 Identities=12% Similarity=0.080 Sum_probs=70.0
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCC--EEEEE----
Q ss_conf 999861577277012345542321010013452057898899972147877789999999987531785--08998----
Q T0620 8 FIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDREWLDLLRGGLKELTDL--DYRPI---- 81 (312)
Q Consensus 8 ~i~TwNVng~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Di~vi~lQE~~~~~~~~~~~~~~~l~~~~~~--~y~~~---- 81 (312)
.|+||||++.....+- .|- ......++...+||| |||||++........ ........+.. .|...
T Consensus 6 rv~TwNi~~~~~~~~~-~~~-----~~~~~~~~~~~~~DI--i~LQEv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 76 (261)
T d1sr4b_ 6 KVATWNLQGSSAVNES-KWN-----INVRQLLSGEQGADI--LMVQEAGSLPSSAVR-TSRVIQHGGTPIEEYTWNLGTR 76 (261)
T ss_dssp CEEEEECCCCSSSSHH-HHH-----HHHHHHHCSTTCCSE--EEEESCCSCCTTCEE-CSCCCCCSSSCCEEEEEESSCS
T ss_pred EEEEEECCCCCCCCCC-CCC-----HHHHHHHHHCCCCCE--EEEECCCCCCCCCHH-HHHHHHHHCCCCEEEEECCCCC
T ss_conf 8999967968787555-544-----899999985579998--999856754563267-9988765076511443114666
Q ss_pred ------------ECCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCC
Q ss_conf ------------31475402678885253201124455132134268756687838999998482899997104778740
Q T0620 82 ------------AMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGNEK 149 (312)
Q Consensus 82 ------------~~~~~~~~gv~vf~r~~~~~~i~~~~~~~~~~g~~~~~~~kG~v~i~~~~~~~~i~~in~hl~a~~~~ 149 (312)
........|++++++.++....... .+.....++.++...+.. ..+++.|+.+....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~g~~~ls~~~~~~~~~~~---------~~~~~~~~r~~~~~~~~~--~~~~~~~~~~~~~~ 145 (261)
T d1sr4b_ 77 SRPNMVYIYYSRLDVGANRVNLAIVSRRQADEAFIVH---------SDSSVLQSRPAVGIRIGT--DVFFTVHALATGGS 145 (261)
T ss_dssp SSCCEEEEEEECCCTTTSCSCEEEEESSCCSEEEEEC---------CCCCSSCCCCEEEEEETT--EEEEEEECCTTTTT
T ss_pred CCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEECC---------CCCCCCCCCEEEEEEEEC--CCCEEEEEEECCCC
T ss_conf 6775368995044334530125999688750104536---------887666652279999841--55147999614775
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 1467899999998730003444556653004644775456545
Q T0620 150 TARRNQNYLDILRLLSLGDRQLNAFDISLRFTHLFWFGDLNYR 192 (312)
Q Consensus 150 ~~~R~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~GD~N~~ 192 (312)
.... ........+. ...........+++++||||..
T Consensus 146 ~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~iv~GDfN~~ 181 (261)
T d1sr4b_ 146 DAVS--LIRNIFTTFN-----SSSSPPERRVYSWMVVGDFNRA 181 (261)
T ss_dssp THHH--HHHHHHHHHH-----C---CGGGGGCEEEEEEECSSC
T ss_pred CCHH--HHHHHHHHHH-----HHHHHHHCCCCCEEEEEECCCC
T ss_conf 1279--9999999999-----9999863569977996332767
Done!