Query T0627 NP_791563.1, Pseudomonas syringae pv. tomato str. DC3000, 261 residues
Match_columns 261
No_of_seqs 117 out of 602
Neff 8.6
Searched_HMMs 22458
Date Thu Jul 22 15:02:43 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0627.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0627.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qcx_A Transcriptional activat 100.0 1.8E-44 0 300.9 28.8 232 8-254 18-250 (263)
2 2gm8_A TENA homolog/THI-4 thia 100.0 1.4E-40 5.6E-45 276.2 26.2 218 11-246 2-220 (221)
3 1udd_A Transcriptional regulat 100.0 2E-40 8.4E-45 275.2 24.8 213 19-248 4-216 (226)
4 3ibx_A TENA, HP1287, putative 100.0 4.6E-40 2.1E-44 272.9 24.2 215 19-246 6-221 (221)
5 1rtw_A Transcriptional activat 100.0 2E-39 9.1E-44 268.7 22.8 209 20-249 2-211 (220)
6 2a2m_A Hypothetical protein BT 100.0 2.1E-38 9.2E-43 262.3 20.8 211 18-253 48-258 (258)
7 1z72_A Transcriptional regulat 100.0 2.1E-38 9.4E-43 262.3 19.7 210 19-246 15-225 (225)
8 2qzc_A Transcriptional activat 100.0 2.3E-37 1E-41 255.7 22.3 206 18-247 5-210 (214)
9 2f2g_A SEED maturation protein 100.0 7.3E-39 3.3E-43 265.2 13.8 215 19-247 5-221 (221)
10 3dde_A TENA/THI-4 protein, dom 100.0 1.8E-36 8.2E-41 249.9 25.5 226 22-260 8-236 (239)
11 3hlx_A Pyrroloquinoline-quinon 100.0 1.2E-35 5.2E-40 244.7 24.4 233 10-253 2-235 (258)
12 1rcw_A CT610, CADD; iron, DI-i 100.0 1E-35 4.6E-40 245.1 22.2 218 19-249 7-224 (231)
13 1wwm_A Hypothetical protein TT 100.0 1.4E-31 6.1E-36 218.8 17.2 186 20-243 4-189 (190)
14 3bjd_A Putative 3-oxoacyl-(acy 99.9 6.8E-26 3E-30 182.4 18.9 233 7-251 97-330 (332)
15 3b5o_A CADD-like protein of un 99.9 5.9E-21 2.6E-25 150.9 16.7 212 21-247 8-229 (244)
16 1wzd_A Heme oxygenase; electro 99.4 3.3E-11 1.5E-15 88.7 19.0 208 15-243 3-211 (215)
17 1n45_A Heme oxygenase 1, HO-1; 99.2 1.1E-09 5.1E-14 78.9 17.0 213 14-247 6-221 (233)
18 1we1_A Heme oxygenase 1; oxido 99.0 6.5E-08 2.9E-12 67.7 18.2 202 19-243 4-206 (240)
19 1wov_A Heme oxygenase 2; HOMO 99.0 2.3E-07 1E-11 64.2 20.2 210 18-246 2-212 (250)
20 1j02_A Heme oxygenase 1; alpha 99.0 6E-08 2.7E-12 68.0 15.8 208 19-247 12-221 (267)
21 2q32_A Heme oxygenase 2, HO-2; 98.8 1.1E-06 5E-11 59.8 18.2 208 19-246 32-240 (264)
22 1j77_A HEMO, heme oxygenase; p 98.2 0.00033 1.5E-08 44.1 16.7 191 18-251 9-199 (209)
23 1sk7_A Hypothetical protein PA 96.8 0.022 9.7E-07 32.5 19.7 190 12-244 6-197 (198)
24 3ge3_A Toluene-4-monooxygenase 95.2 0.13 5.9E-06 27.5 17.5 185 52-248 91-281 (500)
25 3dhz_A Ribonucleotide reductas 84.1 1.6 7.3E-05 20.5 22.9 213 18-245 26-252 (329)
26 3chh_A P-aminobenzoate N-oxyge 81.8 2 9E-05 19.9 18.6 194 33-247 66-279 (336)
27 1mty_D Methane monooxygenase h 78.4 2.6 0.00012 19.2 18.1 193 46-250 78-282 (512)
28 1syy_A Ribonucleoside-diphosph 71.7 3.8 0.00017 18.2 20.1 220 14-245 33-277 (346)
29 3ez0_A Uncharacterized protein 71.5 3.9 0.00017 18.1 16.7 133 67-225 30-162 (225)
30 2inc_A Toluene, O-xylene monoo 63.6 5.6 0.00025 17.1 18.6 116 127-248 164-280 (491)
31 2rcc_A Ribonucleoside-diphosph 56.2 7.5 0.00033 16.3 16.9 215 15-245 36-270 (346)
32 2inp_A Phenol hydroxylase comp 55.8 7.6 0.00034 16.3 18.6 181 52-249 90-280 (494)
33 1dvk_A PRP18; PRE-mRNA splicin 49.1 9.7 0.00043 15.6 3.6 42 39-80 67-114 (173)
34 2rqp_A Heterochromatin protein 43.9 12 0.00052 15.1 4.8 43 9-63 1-43 (88)
35 2gyq_A YCFI, putative structur 36.5 15 0.00067 14.3 12.7 85 50-144 13-97 (173)
36 2o1z_A Ribonucleotide reductas 29.3 20 0.00088 13.6 14.4 154 75-244 109-267 (311)
37 3fme_A Dual specificity mitoge 28.0 17 0.00077 14.0 1.3 17 202-218 240-256 (290)
38 1ezf_A Farnesyl-diphosphate fa 27.6 21 0.00094 13.4 6.3 60 86-145 178-239 (340)
39 1r2f_A Protein (ribonucleotide 25.6 23 0.001 13.2 22.1 212 19-245 17-242 (319)
40 2gol_A Matrix protein P17 (MA) 24.5 24 0.0011 13.0 7.2 53 103-158 33-89 (133)
41 3hiu_A Uncharacterized protein 23.5 25 0.0011 12.9 8.0 67 50-122 3-70 (166)
42 2jp7_A MRNA export factor MEX6 22.3 16 0.00071 14.2 0.2 34 19-55 22-55 (57)
43 2fzf_A Hypothetical protein; s 22.0 27 0.0012 12.7 6.9 49 66-120 33-81 (175)
44 1mxr_A Ribonucleotide reductas 20.2 29 0.0013 12.5 18.9 215 16-245 32-292 (375)
45 2dyl_A Dual specificity mitoge 20.0 27 0.0012 12.7 1.0 17 202-218 257-273 (318)
No 1
>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A
Probab=100.00 E-value=1.8e-44 Score=300.87 Aligned_cols=232 Identities=11% Similarity=0.042 Sum_probs=198.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 58877767762689999999999999987184789985689998999999999899999999999999872788766899
Q T0627 8 TGPLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGE 87 (261)
Q Consensus 8 ~g~~~~~~~~p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~ 87 (261)
-|+-.--.+-=.||++|+++++|+|+++++|||+++|++||||++.|++|++|||+||.+|+|+++++++|||+.+.+..
T Consensus 18 ~~~~~~~~~~M~Fse~L~~~~~~~W~~~~~HPFv~~L~~GtL~~e~f~~YL~QDy~Yl~~~~r~la~~~aka~~~e~~~~ 97 (263)
T 2qcx_A 18 AGSENLYFQGMKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGR 97 (263)
T ss_dssp --------CCSSHHHHHHHHTHHHHHHHHTCHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHH
T ss_pred CCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 68731220688299999987789999997899999976599999999999999999999999999999843999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999866432679999999998718998887204577789999999999742788999999999998501589999
Q T0627 88 DMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSA 167 (261)
Q Consensus 88 ~~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~ 167 (261)
+...+... ...+..+|+++++.+|++.+++.+.+|+|+|.+|++||+.++..+++.++++|++|| +|.|.+|+.
T Consensus 98 ~~~~~~~~-----~~~E~~l~~~~~~~~gi~~~~l~~~~~~p~~~aY~~~l~~~a~~g~~~e~laAllpc-~~~Y~~ig~ 171 (263)
T 2qcx_A 98 MASHAQGT-----YEAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSVLSGNFAEILAALLPC-YWLYYEVGE 171 (263)
T ss_dssp HHHHHHHH-----HHHHHHHHHHHHHHHTCCHHHHHSCCCCHHHHHHHHHHHHHHTTTCHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHH
T ss_conf 99999999-----999999999999984999889834776615558999999998469989999999999-999999999
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99876654203577665688999996248535689999-99999997537999899999999999999999999999988
Q T0627 168 VVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEA-LEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQL 246 (261)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~ 246 (261)
.+... ...+++|.+|++.|+++++....+. ..++++++.. .++.+++++.++|.+++++|+.||||||+.
T Consensus 172 ~l~~~--------~~~~~~Y~eWI~~y~~~~f~~~v~~l~~~ld~~a~~-~~~~~~~~l~~~F~~a~~lE~~FWd~Ay~~ 242 (263)
T 2qcx_A 172 KLLHC--------DPGHPIYQKWIGTYGGDWFRQQVEEQINRFDELAEN-STEEVRAKMKENFVISSYYEYQFWGMAYRK 242 (263)
T ss_dssp HHTTC--------CCCSHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHT-SCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHC--------CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98753--------787856899998728878999999999999999876-999999999999999999999999988427
Q ss_pred HHHCCCCC
Q ss_conf 75258888
Q T0627 247 DKVKSPRG 254 (261)
Q Consensus 247 e~~~~~~~ 254 (261)
|+|-.++-
T Consensus 243 e~W~~~~~ 250 (263)
T 2qcx_A 243 EGWSDSAI 250 (263)
T ss_dssp CCSCC---
T ss_pred CCCCCCHH
T ss_conf 89998313
No 2
>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum str} SCOP: a.132.1.3 PDB: 2gm7_A*
Probab=100.00 E-value=1.4e-40 Score=276.23 Aligned_cols=218 Identities=10% Similarity=0.030 Sum_probs=183.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 77767762689999999999999987184789985689998999999999899999999999999872788766899999
Q T0627 11 LMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMA 90 (261)
Q Consensus 11 ~~~~~~~p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~ 90 (261)
+|.+.-+|.|+++|++++.|+|+++++|||+++|++||||++.|++|++|||+||.+|+|+++.+++|+|+.+....+..
T Consensus 2 ~~~~~~~~g~~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~yl~QDy~yl~~~~r~la~~~~ka~~~~~~~~~~~ 81 (221)
T 2gm8_A 2 ALHHHHHHGVTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALE 81 (221)
T ss_dssp ---CTTCSSHHHHHHHHTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHH
T ss_pred CCHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 63100322189999997499999998898999977599999999999999899999999999999873998799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999866432679999999998718998887204577789999999999742788999999999998501589999998
Q T0627 91 RRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVC 170 (261)
Q Consensus 91 ~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~ 170 (261)
.+.. . ...+..+++++++.+|++.+++.+.+|+|+|.+|++|+++++.++++.++++|++|| +|.|..|+....
T Consensus 82 ~~~~--~---~~~E~~~~~~~~~~~gi~~~~~~~~~~~~~~~~y~~~l~~~a~~~~~~~~l~al~pc-~~~Y~~i~~~~~ 155 (221)
T 2gm8_A 82 LAYG--T---VTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALEGFYQCMAALLPC-FWSYAEIAERHG 155 (221)
T ss_dssp HHHH--H---HHTHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHH-HHHHHHHHHHHG
T ss_pred HHHH--H---HHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHHHHHHHH
T ss_conf 9999--9---999999999999981989889852375241479999999987059999999999788-879999999998
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7665420357766568899999624853568-999999999997537999899999999999999999999999988
Q T0627 171 STGVYAEAFAEETRKKSMKWLKMHAQYDDAH-PWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQL 246 (261)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h-~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~ 246 (261)
.... ...++++.+|++.|++.++.. +.....++ +.. +.+++++.++|.+++++|+.|||+||+.
T Consensus 156 ~~~~------~~~~~~y~~wi~~~~~~~~~~~v~~l~~~l----d~~--~~~~~~~~~~f~~a~~lE~~Fwd~ay~~ 220 (221)
T 2gm8_A 156 GKLR------ENPVHVYKKWASVYLSPEYRGLVERLRAVL----DSS--GLSAEELWPYFKEASLYELEFWQAAYEG 220 (221)
T ss_dssp GGGG------GCCCHHHHHHHHHHHSHHHHHHHHHHHHHH----HTS--SCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHCC------CCCCCCHHHHHHHCCCHHHHHHHHHHHHHH----HCC--HHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 5246------788985099999718888999999999998----458--4209999999999999999999997725
No 3
>1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii OT3} SCOP: a.132.1.3
Probab=100.00 E-value=2e-40 Score=275.18 Aligned_cols=213 Identities=12% Similarity=0.067 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999998718478998568999899999999989999999999999987278876689999999999866
Q T0627 19 AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNI 98 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (261)
-|+++|+++++|+|+++++|||+++|++||||++.|++|++|||+||.+|+|+++.+++++++.+.+..+. ...
T Consensus 4 ~fs~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~------~~~ 77 (226)
T 1udd_A 4 MITDKLRRDSEQIWKKIFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKAEYPLMAELIE------LAR 77 (226)
T ss_dssp CHHHHHHHTTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTHHHHHHH------HHH
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH------HHH
T ss_conf 79999998779999999889899997759999999999999999999999999999987167199999999------999
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 43267999999999871899888720457778999999999974278899999999999850158999999876654203
Q T0627 99 RVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEA 178 (261)
Q Consensus 99 ~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~ 178 (261)
.....|.++++++++.+|++.+++.+.+|+|+|.+|++||++++.++++.++++|++|| +|.|.+|+.......+
T Consensus 78 ~~~~~e~~~~~~~~~~~g~~~~~~~~~~~~~a~~~Y~~~l~~~a~~g~~~~~l~al~pc-~~~Y~~i~~~~~~~~~---- 152 (226)
T 1udd_A 78 DEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGNIIEGLTALLPC-FWSYAEIAEYHKDKLR---- 152 (226)
T ss_dssp HHTTHHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHH-HHHHHHHHHHTHHHHT----
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHC----
T ss_conf 99999999999899985999677530375435678999999987168808999999999-9999999999987305----
Q ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5776656889999962485356899999999999753799989999999999999999999999998875
Q T0627 179 FAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDK 248 (261)
Q Consensus 179 ~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~ 248 (261)
..++++|.+|++.|+++++.+..+. ++++++. .++++++++.++|.+++++|+.|||+||+.+-
T Consensus 153 --~~~~~~y~~Wi~~y~~~~f~~~v~~---l~~~~d~-~~~~~~~~~~~~F~~~~~lE~~Fwd~Ay~~~~ 216 (226)
T 1udd_A 153 --DNPIKIYREWGKVYLSNEYLNLVGR---LRKIIDS-SGHSGYDRLRRIFITGSKFELAFWEMAWRGGD 216 (226)
T ss_dssp --TCSCHHHHHHHHGGGSHHHHHHHHH---HHHHHHT-SCSSCHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred --CCCCCCHHHHHHHCCCHHHHHHHHH---HHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf --6887608999987378799999999---9999986-79899999999999999999999999876898
No 4
>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrolase; 2.40A {Helicobacter pylori} PDB: 2rd3_A
Probab=100.00 E-value=4.6e-40 Score=272.87 Aligned_cols=215 Identities=14% Similarity=0.084 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999998718478998568999899999999989999999999999987278876689999999999866
Q T0627 19 AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNI 98 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (261)
.||+.|++.++|+|+++++|||+++|++|+||++.|++|++|||+||.+|+|+++.++++||+.+....+...+...
T Consensus 6 ~~s~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~yl~QD~~yl~~~~r~~a~~~a~~~~~~~~~~~~~~~~~~--- 82 (221)
T 3ibx_A 6 QVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSNAIQDI--- 82 (221)
T ss_dssp CHHHHHHHHHHHHHHHHHTSHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---
T ss_conf 79999998589999999889999997759999999999999999999999999999875179889999999999999---
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 43267999999999871899888720457778999999999974278899999999999850158999999876654203
Q T0627 99 RVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEA 178 (261)
Q Consensus 99 ~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~ 178 (261)
...|..+|+++++.+|++.+++.+.+|+|+|++|+++++.++..+++.++++|+++| ||.|..++..+....
T Consensus 83 --~~~E~~~~~~~~~~~g~~~~~~~~~~p~~~~~~y~~~~~~~a~~~~~~~~l~al~~~-~~~y~~~~~~l~~~~----- 154 (221)
T 3ibx_A 83 --LNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGSIKEVAAAVLSC-GWSYLVIAQNLSQIP----- 154 (221)
T ss_dssp --HSCTTSHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHHHSCHHHHHHHTHHH-HHHHHHHHHHHTCSS-----
T ss_pred --HHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHHHHHHCC-----
T ss_conf --998778999999994998777741675177889999999998459848899999999-999999989998633-----
Q ss_pred CCCCCCHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 577665688999996248535-68999999999997537999899999999999999999999999988
Q T0627 179 FAEETRKKSMKWLKMHAQYDD-AHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQL 246 (261)
Q Consensus 179 ~~~~~~~~~~~w~~~h~~~D~-~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~ 246 (261)
....++++.+|++.|+++++ +++.....++++++. ..++++++++.++|.+++++|+.|||+||+.
T Consensus 155 -~~~~~~~~~~wi~~y~~~~~~~~v~~~~~~ld~~~~-~~~~~~~~~~~~~f~~~~~lE~~Fwd~ay~~ 221 (221)
T 3ibx_A 155 -NALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTL-ASSKQEIEKLKEIFITTSEYEYLFWDMAYQS 221 (221)
T ss_dssp -STTTCTTTHHHHHHTTSHHHHHHHHHHHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf -778885589999986792069999999999999987-5999999999999999999999999987529
No 5
>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein structure initiative; HET: MP5; 2.35A {Pyrococcus furiosus dsm 3638} SCOP: a.132.1.3
Probab=100.00 E-value=2e-39 Score=268.72 Aligned_cols=209 Identities=11% Similarity=0.100 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999987184789985689998999999999899999999999999872788766899999999998664
Q T0627 20 WAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIR 99 (261)
Q Consensus 20 ~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (261)
||++|+++++|+|+++++|||+++|++||||++.|++|++|||+||.+|+|+++.++++||+... ..+. ....
T Consensus 2 Fs~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~Yl~QDy~yl~~~~r~~~~~~~~a~~~~~-~~~~------~~~~ 74 (220)
T 1rtw_A 2 FSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLL-PFFA------ESIY 74 (220)
T ss_dssp HHHHHHHHSHHHHGGGTTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGH-HHHH------HHHH
T ss_pred HHHHHHHHCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH-HHHH------HHHH
T ss_conf 28999886899999998897999986299999999999999999999999999999866996999-9999------9988
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 32679999999998718998887204577789999999999742788999999999998501589999998766542035
Q T0627 100 VELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEAF 179 (261)
Q Consensus 100 ~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~~ 179 (261)
....|..++.++++.+|++.+ .+|.|+|++|++||++++..+++.++++|++|| ||+|..++.......
T Consensus 75 ~~~~El~~~~~~~~~~g~~~~----~~~~p~~~aY~~~l~~~a~~~~~~~~l~al~pc-e~~Y~~~~~~~~~~~------ 143 (220)
T 1rtw_A 75 YISKELEMFEKKAQELGISLN----GEIDWRAKSYVNYLLSVASLGSFLEGFTALYCE-EKAYYEAWKWVRENL------ 143 (220)
T ss_dssp HHHHHHHHHHHHHHHTTCCSS----SCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHH-HHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHCCCCCC----CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHHHHHHCC------
T ss_conf 899999999999998199633----323565799999999987459858899999999-999999998765326------
Q ss_pred CCCCCHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77665688999996248535689999-99999997537999899999999999999999999999988752
Q T0627 180 AEETRKKSMKWLKMHAQYDDAHPWEA-LEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDKV 249 (261)
Q Consensus 180 ~~~~~~~~~~w~~~h~~~D~~h~~e~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~~ 249 (261)
..++++.+|++.|+++++...... ..++++.+.. .++.+++++.++|++++++|+.|||+||+.|-+
T Consensus 144 --~~~~~y~~wi~~y~~~~f~~~v~~~~~~ld~~~~~-~~~~~~~~~~~~f~~~~~lE~~Fwd~ay~~e~~ 211 (220)
T 1rtw_A 144 --KERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEK-HGEFEKERAREVFKEVSKFELIFWDIAYGGEGN 211 (220)
T ss_dssp --SSCCTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-SCHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred --CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf --77886899999837867899999999999999987-899999999999999999999999999818975
No 6
>2a2m_A Hypothetical protein BT3146; NP_812058.1, structural genomics, joint center for structural genomics, JCSG; 1.88A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.132.1.3 PDB: 2a2o_A
Probab=100.00 E-value=2.1e-38 Score=262.30 Aligned_cols=211 Identities=7% Similarity=0.007 Sum_probs=177.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 26899999999999999871847899856899989999999998999999999999998727887668999999999986
Q T0627 18 PAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRN 97 (261)
Q Consensus 18 p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~ 97 (261)
-+|+++||+++.++|+++++|||+++|++|+||++.|++|++|||+||.+|+|+++.+++|+|+.+....+...+
T Consensus 48 ~~~~~~Lw~~~~~~~~~~~nh~Fv~~L~~GtL~~e~F~~YL~QDy~YL~~~~r~la~~~aka~~~~~~~~~~~~l----- 122 (258)
T 2a2m_A 48 DSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQDETLREFFKAKA----- 122 (258)
T ss_dssp TSHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-----
T ss_conf 559999999759999999788899998729999999999999869999999999999988499989999999999-----
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 64326799999999987189988872045777899999999997427889999999999985015899999987665420
Q T0627 98 IRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAE 177 (261)
Q Consensus 98 ~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~ 177 (261)
. .+.+++..+++.+|++.. .+.+|.|+|++|++||++++.++++.++++|++|| +|.|..|+..+...
T Consensus 123 -~---~e~~~~~~~~~~~gi~~~--~~~~~~pat~aY~~~L~~~a~~g~~~~~laAllpC-~~~Y~~igk~l~~~----- 190 (258)
T 2a2m_A 123 -K---SYDEYNETYHQTWHLREA--SGLIPGTDIKDYADYEAYVAGSLASPYMCVVMLPC-EYLWPWIANFLDGY----- 190 (258)
T ss_dssp -H---HHHHHHHHHHHTSCBCCG--GGBCCCHHHHHHHHHHHHHHHHSCTHHHHHHHHHH-HHHHHHHHHHHGGG-----
T ss_pred -H---HHHHHHHHHHHHCCCCHH--HCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHHHHHHC-----
T ss_conf -9---999999999998199803--10897747999999999998449999999999999-99999999998755-----
Q ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 3577665688999996248535689999999999975379998999999999999999999999999887525888
Q T0627 178 AFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDKVKSPR 253 (261)
Q Consensus 178 ~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~~~~~~ 253 (261)
...+++|.+|+..|.+ ..+++.....++++.+. +.+++++.++|++++++|+.|||+||..+.|..++
T Consensus 191 ---~~~~~~y~~WI~~y~~-f~~~~~~l~~~ld~~~~----~~~~~~~~~iF~~~~~lE~~Fwd~A~~~~~~~~~~ 258 (258)
T 2a2m_A 191 ---TPTNSLYRFWIEWNGG-TPNGAYQMGNMLEQYRD----KIDEDKAVEIFNTAMNYELKVFTSSTILTTIENGK 258 (258)
T ss_dssp ---SCTTSTTHHHHHHHCS-CCHHHHHHHHHHHTTGG----GSCHHHHHHHHHHHHHHHHHHHHHTTCCC------
T ss_pred ---CCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf ---7889718999884840-99999999999998638----34799999999999999999999898787685379
No 7
>1z72_A Transcriptional regulator, putative; structural genomics, PSI, protein structure initiative; 1.45A {Streptococcus pneumoniae TIGR4} SCOP: a.132.1.3 PDB: 2a6b_A
Probab=100.00 E-value=2.1e-38 Score=262.26 Aligned_cols=210 Identities=12% Similarity=0.154 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999998718478998568999899999999989999999999999987278876689999999999866
Q T0627 19 AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNI 98 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (261)
.++.+|+.++++.|+++++|||+++|.+|+||++.|+.|++|||+||.+|+|+++.+++++|+.+.+..+...+..
T Consensus 15 ~~~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~yl~Qdy~yv~~~~r~~a~~~~~~~~~~~~~~~~~~l~~---- 90 (225)
T 1z72_A 15 LTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKLRFAKQLGF---- 90 (225)
T ss_dssp HHHHHHHHTTHHHHHHHHTCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_conf 6999999968999999988999999756999999999999999999999999999998859898999999999999----
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 43267999999999871899888720457778999999999974278899999999999850158999999876654203
Q T0627 99 RVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEA 178 (261)
Q Consensus 99 ~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~ 178 (261)
.+..|..+++++++.+|++++++.+.+|+|+|++|+++|+.++..+++.++++|+++| +|.|..|+...
T Consensus 91 -~~~~e~~~~~~~~~~~gi~~~~~~~~~~~~~~~~y~~~l~~~a~~~~~~~~l~al~~~-~~~y~~~~~~~--------- 159 (225)
T 1z72_A 91 -LEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVASSDYAHLLVMLVIA-EGLYLDWGSKD--------- 159 (225)
T ss_dssp -HHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHHHHHHHTCS---------
T ss_pred -HHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHHHH---------
T ss_conf -9976678999999993959888731465235667999999987149879999999999-99779899899---------
Q ss_pred CCCCCCHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 577665688999996248535-68999999999997537999899999999999999999999999988
Q T0627 179 FAEETRKKSMKWLKMHAQYDD-AHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQL 246 (261)
Q Consensus 179 ~~~~~~~~~~~w~~~h~~~D~-~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~ 246 (261)
.....++++.+||+.|+++++ .|+.....+++.++. ++.+++++.++|++++++|+.|||+||+.
T Consensus 160 ~~~~~~~~~~~wi~~~~~~~~~~~~~~~~~~ld~~~~---~~~~~~~~~~~f~~a~~lE~~F~d~ay~l 225 (225)
T 1z72_A 160 LALPEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGK---NREDLTELQQRWNQAVALELAFFDIGYDV 225 (225)
T ss_dssp SCCCSSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHTTTTC--
T ss_pred HHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8863697420377734876599999999999998729---99999999999999999999999986478
No 8
>2qzc_A Transcriptional activator TENA-1; NP_343586.1, putative TENA-like thiaminase II, structural genomics; 1.50A {Sulfolobus solfataricus P2}
Probab=100.00 E-value=2.3e-37 Score=255.68 Aligned_cols=206 Identities=15% Similarity=0.093 Sum_probs=171.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 26899999999999999871847899856899989999999998999999999999998727887668999999999986
Q T0627 18 PAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRN 97 (261)
Q Consensus 18 p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~ 97 (261)
-.+.+.|++++.|+|+++++|||+++|++||||++.|++|++|||+||.+|+|+++.+++|+|+.+....+.. .
T Consensus 5 ~~~~e~L~~~~~~~W~~~~~HpFv~~l~~GtL~~~~f~~Yl~QD~~yl~~~~r~la~~~~k~~~~~~~~~l~~---~--- 78 (214)
T 2qzc_A 5 VGNVENLINGVGELWNKYVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDKVTKILNL---V--- 78 (214)
T ss_dssp CHHHHHHHHHTTTHHHHHHTCHHHHHHHTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH---H---
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH---H---
T ss_conf 5699999997299999987898999977199999999999999999999999999999874997999999999---9---
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 64326799999999987189988872045777899999999997427889999999999985015899999987665420
Q T0627 98 IRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAE 177 (261)
Q Consensus 98 ~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~ 177 (261)
......+..+|.++++.+|++++++.+++|.|+|.+|+++|+.++. +++.++++|+.|| +|.|.+++..+..
T Consensus 79 ~~~~~~E~~~~~~~~~~~gi~~~~~~~~~~~~~~~~y~~~l~~~a~-~~~~~~l~al~pc-~~~Y~~~~~~~~~------ 150 (214)
T 2qzc_A 79 FSSRDKGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYAN-LDWNKFLVAWTPC-MFGYSIVGDYVID------ 150 (214)
T ss_dssp TCC--CHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHH-HCHHHHHHHHHHH-HHHHHHHHHHHTT------
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHH-HHHHHHHHHHHHH------
T ss_conf 8899999999999999859798898652212488999999999874-8899899999999-9999999999874------
Q ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3577665688999996248535689999999999975379998999999999999999999999999887
Q T0627 178 AFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLD 247 (261)
Q Consensus 178 ~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e 247 (261)
..+++|.+|++.|+++++....+.+. ..++..+ .++++.++|++++++|+.|||+||++|
T Consensus 151 ----~~~~~y~~Wi~~y~~~ef~~~v~~l~---~~~d~~~---~~e~~~~iF~~~~~lE~~Fwd~Ay~~~ 210 (214)
T 2qzc_A 151 ----SPNEVYKTWASFYASTEYKKRIEAIL---YALDEVS---ITEDLLNIFINSVRFEIGFWDASLRKD 210 (214)
T ss_dssp ----CSCHHHHHHHHHHHSHHHHHHHHHHH---HHHTTSC---CCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ----CCCCCHHHHHHHCCCHHHHHHHHHHH---HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf ----65533888999719989999999999---9982134---599999999999999999999887468
No 9
>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, structural genomics; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A*
Probab=100.00 E-value=7.3e-39 Score=265.19 Aligned_cols=215 Identities=14% Similarity=0.086 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999998718478998568999899999999989999999999999987278876689999999999866
Q T0627 19 AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNI 98 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (261)
.++++|+++++++|+++++|||+++|++|+||.+.|++|++|||+||.+|+|++++++++|++.+.+..+... +....
T Consensus 5 ~~~~~l~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~yl~QD~~yl~~~~r~~a~~~~~a~~~~~~~~~~~~--l~~~~ 82 (221)
T 2f2g_A 5 GVIDTWIDKHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDMEV--VLGGI 82 (221)
T ss_dssp CHHHHHHHHTHHHHHHHTSCSCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTHHHH--HHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH--HHHHH
T ss_conf 1999999977999999988989999772999999999999999999999999999998858997999999999--99999
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 4326799999999987189988872045777899999999997427-889999999999985015899999987665420
Q T0627 99 RVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSS-DSLAVAMAATNYAIEGATGEWSAVVCSTGVYAE 177 (261)
Q Consensus 99 ~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~-~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~ 177 (261)
..+..|..+|.+++...|++.+ +.+|.|+|++|+++|..++.. +++.++++|+.|| +|.|++++..+.....
T Consensus 83 ~~~~~e~~~~~~~~~~~g~~~~---~~~~~~~~~~y~~~l~~~~~~~~~~~~~l~al~pc-~~~Y~~~~~~~~~~~~--- 155 (221)
T 2f2g_A 83 ASLNDEIEWFKREGSKWDVDFS---TVVPQRANQEYGRFLEDLMSSEVKYPVIMTAFWAI-EAVYQESFAHCLEDGN--- 155 (221)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGG---GCCCCHHHHHHHHHHHHTTSTTSCHHHHHHHHHHH-HHHHHHHTTTHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHCCCCHH---HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHHHHHHCCC---
T ss_conf 9999999999999765676242---06875558999999999987079889899999989-9999999999974467---
Q ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 357766568899999624853568999-9999999975379998999999999999999999999999887
Q T0627 178 AFAEETRKKSMKWLKMHAQYDDAHPWE-ALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLD 247 (261)
Q Consensus 178 ~~~~~~~~~~~~w~~~h~~~D~~h~~e-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e 247 (261)
..++++.+|++.|+++++.+..+ ...++++.+.. .++++++++.++|++++++|++|||+||..|
T Consensus 156 ----~~~~~y~~wi~~y~~~~~~~~~~~~~~~~d~~~~~-~s~e~~~~~~~~f~~~~~lE~~Fwd~Ay~~e 221 (221)
T 2f2g_A 156 ----KTPVELTGACHRWGNDGFKQYCSSVKNIAERCLEN-ASGEVLGEAEDVLVRVLELEVAFWEMSRGGQ 221 (221)
T ss_dssp ----TSSSCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred ----CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf ----55534999999718867999999999999999876-9999999999999999999999999861699
No 10
>3dde_A TENA/THI-4 protein, domain of unknown function with A heme oxygenase-like fold; YP_564736.1, structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=100.00 E-value=1.8e-36 Score=249.88 Aligned_cols=226 Identities=13% Similarity=0.097 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHH-HHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998-71847899856899989999999998999999999999998727887668999999999986643
Q T0627 22 QQLINDCSPAKARV-VEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIRV 100 (261)
Q Consensus 22 ~~L~~~~~~~w~~~-~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (261)
.+|++++.++|+.. .+|||+++|.+|+|+++.|+.|++|+|+|+++|+++++.+++++++..... +..+..++.+
T Consensus 8 ~~l~~~~~~~~~~~~~~hPf~~~l~~G~l~~~~~~~yl~q~y~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~ 83 (239)
T 3dde_A 8 TKLEQKVATMWDSILTNSPFIHEVLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPGKY----LSFCFHHAHE 83 (239)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHTTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSSCCHHH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH----HHHHHHHHHH
T ss_conf 999999999999999729799998659999999999999999999999999999987523111899----9999876266
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 26799999999987189988872045777899999999997427889999999999985015899999987665420357
Q T0627 101 ELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEAFA 180 (261)
Q Consensus 101 e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~~~ 180 (261)
|.+|..+++++++++|++++++.+.+|+|+|++|++++++++..+++..+++++. +.||.++.++..+...... ++
T Consensus 84 E~~h~~l~~~~l~~lGi~~~~l~~~~p~p~t~~~~~~l~~~~~~~~~~~~laa~~-~~E~~~~~~~~~~~~~~~~---~~ 159 (239)
T 3dde_A 84 EAGHELMALSDIASIGFDREDVLSSKPLPATETLIAYLYWISATGNPVQRLGYSY-WAENVYGYIDPVLKAIQST---LD 159 (239)
T ss_dssp HTTTHHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHHSSCGGGGHHHHH-HHHTCHHHHHHHHHHHHHH---TT
T ss_pred HCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHC---CC
T ss_conf 4037899999999969599998617998699999999999986699999999999-9998568899999999862---69
Q ss_pred CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCC
Q ss_conf 766568899999624853568999999999997537999899999999999999999999999988752--588886100
Q T0627 181 EETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDKV--KSPRGRVAA 258 (261)
Q Consensus 181 ~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~~--~~~~~~~~~ 258 (261)
.++....||+.|++.|.+|+.....++..++ .++++++++++++.+++++++.|||++|+..+. .+.++|.|-
T Consensus 160 --~~~~~~~~~~~h~~~d~~H~~~~~~ll~~~~---~s~e~~~~v~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~~~~~ 234 (239)
T 3dde_A 160 --LTPQSMKFFIAHSKIDAKHAEEVNEMLHEVC---KTQEDVDSVVAVMENSLVLTARILDDVWKEYQLFQSGASDRYAF 234 (239)
T ss_dssp --CCGGGGHHHHHHHHHHHHHHHHHHHHHHHHC---CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCSSCCCC
T ss_pred --CCCHHEEEEEHHHHHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf --8800013211008645999999999999884---99999999999999999999999999999988764355110130
Q ss_pred CC
Q ss_conf 14
Q T0627 259 LE 260 (261)
Q Consensus 259 ~~ 260 (261)
++
T Consensus 235 ~~ 236 (239)
T 3dde_A 235 LR 236 (239)
T ss_dssp --
T ss_pred HC
T ss_conf 30
No 11
>3hlx_A Pyrroloquinoline-quinone synthase; PQQC, PQQ biosynthesis, oxidase, complex, all helical, oxido; HET: PQQ; 1.30A {Klebsiella pneumoniae subsp} PDB: 3hml_A* 1otv_A 3hnh_A* 1otw_A*
Probab=100.00 E-value=1.2e-35 Score=244.74 Aligned_cols=233 Identities=10% Similarity=0.083 Sum_probs=199.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 87776776268999999999999998718478998568999899999999989999999999999987278876689999
Q T0627 10 PLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDM 89 (261)
Q Consensus 10 ~~~~~~~~p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~ 89 (261)
.++++.|..+|.++|..... +.-.+|||++.|.+|+|+++.|+.|+.|+|+|+++|+|++++++++||+.+.+..+.
T Consensus 2 ~~~~~m~~~~F~~~L~~~~~---~~h~~HPF~~~~~~G~ls~~~l~~~~~q~y~yv~~fpr~laai~s~~~d~~~r~~l~ 78 (258)
T 3hlx_A 2 LITDTLSPQAFEEALRAKGD---FYHIHHPYHIAMHNGNATREQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRRKWV 78 (258)
T ss_dssp CCSSCCCHHHHHHHHHHGGG---GSGGGSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH---HHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 76565899999999999877---634798699998779999999999999888999977999999998199889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC-CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999998664326799999999987189988872045-777899999999997427889999999999985015899999
Q T0627 90 ARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQR-VAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAV 168 (261)
Q Consensus 90 ~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~-p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~ 168 (261)
.++....+..++.+|.++|++|++++|++++++.+.. ++|+|+.+++++..++..+++.+++|++ ++|+++|.++..
T Consensus 79 ~nl~eE~g~~~~~~H~el~~~f~~alG~~~e~v~~~~~~lp~t~~~v~~~~~~~~~~~~~~~~Aa~--~~E~~~p~i~~~ 156 (258)
T 3hlx_A 79 QRILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRACWQEAACSS--LTELFAPQIHQS 156 (258)
T ss_dssp HHHHHHHCSSSSCHHHHHHHHHHHHTTCCHHHHHTCCSCCHHHHHHHHHHHHHHHHSCHHHHHHGG--GGGGTHHHHHHH
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH--HHHHHHHHHHHH
T ss_conf 999998666788737999999999919998884013458839999999999975136599999999--999980899999
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98766542035776656889999962485356899999999999753799989999999999999999999999998875
Q T0627 169 VCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDK 248 (261)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~ 248 (261)
.... +.. ++.+.++..++||+.|...|.+|++...+++..+| .++++|++++++++.++++.|.|||++|+.=.
T Consensus 157 ~i~g--l~~-~y~~~~~~~l~fF~~h~~~d~~h~e~~~~lv~~~a---~t~e~q~~~l~a~~~~~~~lw~flDgi~~aY~ 230 (258)
T 3hlx_A 157 RLDS--WPQ-HYPWIKEEGYFFFRSRLSQANRDVEHGLALAKAYC---DSAEKQNRMLEILQFKLDILWSMLDAMTMAYA 230 (258)
T ss_dssp HHHH--HHH-HCTTSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHC---CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHH--HHH-HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9998--998-63878867889999988622677999999999983---99999999999999999999999999999857
Q ss_pred HCCCC
Q ss_conf 25888
Q T0627 249 VKSPR 253 (261)
Q Consensus 249 ~~~~~ 253 (261)
-.-||
T Consensus 231 ~~~~~ 235 (258)
T 3hlx_A 231 LQRPP 235 (258)
T ss_dssp SSCCT
T ss_pred CCCCC
T ss_conf 89999
No 12
>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase, toxin; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4
Probab=100.00 E-value=1e-35 Score=245.09 Aligned_cols=218 Identities=17% Similarity=0.155 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999998718478998568999899999999989999999999999987278876689999999999866
Q T0627 19 AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNI 98 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (261)
.|.++|.+.+.+ +.+++|||+++|.+|+|+++.|++|++|||+||++|+|++++++++||+.+.+..+...+ .+..
T Consensus 7 ~f~~~l~~~~~~--~~~~~HPf~~~l~~G~l~~e~~~~yl~Q~y~~~~~f~r~la~~~~~~~~~~~~~~l~~~l--~~e~ 82 (231)
T 1rcw_A 7 NFLDQLDLIIQN--KHMLEHTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNL--MDEE 82 (231)
T ss_dssp CHHHHHHHHHHH--TCGGGSHHHHHHHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH--HHHH
T ss_pred HHHHHHHHHHHH--CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH--HHHH
T ss_conf 899999999965--502168699997769999999999999999999999999999977099716789999999--9986
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 43267999999999871899888720457778999999999974278899999999999850158999999876654203
Q T0627 99 RVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEA 178 (261)
Q Consensus 99 ~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~ 178 (261)
..+..|..+++++++.+|++++++.+.+|.|+|.+|++++++++.++++.+++|++++| ||.++.++..+.+.....
T Consensus 83 ~~~~~h~~l~~~~~~~~g~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~-e~~~~~~~~~~~~~~~~~-- 159 (231)
T 1rcw_A 83 NGYPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWCTGDSLAAGVAALYSY-ESQIPRIAREKIRGLTEY-- 159 (231)
T ss_dssp SSSSCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHHH-HTTHHHHHHHHHHHHHHH--
T ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHC--
T ss_conf 23352799999988874699999840242168899999999998132599999999999-999999999999877752--
Q ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57766568899999624853568999999999997537999899999999999999999999999988752
Q T0627 179 FAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDKV 249 (261)
Q Consensus 179 ~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~~ 249 (261)
..+.+.....||+.|.+.|.+|+..+.+++..++. ++++++.++|.++++++|.|||++|+..-.
T Consensus 160 -~~~~~~~~~~~f~~h~~~D~~H~~~~~~l~~~~~~-----e~~~~~~~~~~~~~~~~~~f~d~~y~~~~~ 224 (231)
T 1rcw_A 160 -FGFSNPEDYAYFTEHEEADVRHAREEKALIEMLLK-----DDADKVLEASQEVTQSLYGFLDSFLDPGTC 224 (231)
T ss_dssp -SCCCSGGGGHHHHHHHHHHHHHHHHHHHHHHHHCS-----SCHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf -79985678899899999989999999999987799-----999999999999999999999986676779
No 13
>1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structural genomics; 2.61A {Thermus thermophilus HB8} SCOP: a.132.1.3
Probab=100.00 E-value=1.4e-31 Score=218.79 Aligned_cols=186 Identities=12% Similarity=0.012 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999987184789985689998999999999899999999999999872788766899999999998664
Q T0627 20 WAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIR 99 (261)
Q Consensus 20 ~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (261)
+|..|++++.|+|+++..||| +|++++|++|++|||+||.+|+|+++.+++|+|+.+....+.... ++.
T Consensus 4 ~~~~l~~~~~~i~~~i~~~Pf-------~L~~e~F~~YL~QD~~YL~~yar~~a~~~~ka~~~~~~~~~~~~~----~~~ 72 (190)
T 1wwm_A 4 LGLDLLKEVPGLLEEIKALPL-------RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQAHRAPLVQALM----ATV 72 (190)
T ss_dssp -------CCSSHHHHHHHCCC-------CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHHHHHCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH----HHH
T ss_conf 169999874689999984887-------899999999999899999999999999998299899999999998----999
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 32679999999998718998887204577789999999999742788999999999998501589999998766542035
Q T0627 100 VELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEAF 179 (261)
Q Consensus 100 ~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~~ 179 (261)
.+..+|++++..+| .+|.|+|.+|++||++++. +++.++++|+.|| +|.|.+|+....+
T Consensus 73 ---~E~~~~~~~~~~~~--------~~~~p~~~aY~~~l~~~a~-~~~~e~laal~pc-~~~Y~~ig~~~~~-------- 131 (190)
T 1wwm_A 73 ---EELDWLLLQGASPS--------APVHPVRAGYIALLEEMGR-LPYAYRVVFFYFL-NGLFLEAWAHHVP-------- 131 (190)
T ss_dssp ---HHHHHHHTTTCCSS--------SCCCHHHHHHHHHHHHHHH-SCHHHHHHHHHHH-HHHHHHHHHHHSC--------
T ss_pred ---HHHHHHHHHHHHCC--------CCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHH-HHHHHHHHHHHHH--------
T ss_conf ---99999999887659--------9998358999999998747-7839999999999-9999999997522--------
Q ss_pred CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7766568899999624853568999999999997537999899999999999999999999999
Q T0627 180 AEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERC 243 (261)
Q Consensus 180 ~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~ 243 (261)
.+++|.+|++.|+++++......+..+.+.+....+++ ++.+.|++++++|++||||+
T Consensus 132 ---~~~py~eWI~~Y~~~ef~~~v~~l~~~vd~~~~~~~~e---~~~~~f~~~~~lE~~FW~M~ 189 (190)
T 1wwm_A 132 ---EEGPWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPE---VVRTYLRRILEAEKATWSLL 189 (190)
T ss_dssp ---SSSHHHHHHHHHSCTTHHHHHHHHHHHHHHHHTTSCHH---HHHHHHHHHHHHHHHHHHTT
T ss_pred ---CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHHC
T ss_conf ---47838999987199889999999999999986339999---99999999999999997504
No 14
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthase; structural genomics, APC5632, PSI-2, protein structure initiative; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=99.95 E-value=6.8e-26 Score=182.43 Aligned_cols=233 Identities=11% Similarity=0.063 Sum_probs=192.7
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 05887776776268999999999999998718478998568999899999999989999999999999987278876689
Q T0627 7 RTGPLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPG 86 (261)
Q Consensus 7 ~~g~~~~~~~~p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~ 86 (261)
-.+.....-|+++|.++|.+.... +...+|||++.|.+|++++++++.|+.|.|+|...|++..+..+++|++.+.+.
T Consensus 97 ~~~~~~~~ls~~~f~~~L~~~i~~--~~~~~HPf~~~~~~G~~s~eqlr~~~~~r~~y~~~~~~~~aa~~~~~~d~~~r~ 174 (332)
T 3bjd_A 97 PAADLSRALSEEDFQKRLEQEIAA--QSRERHPMSQYVFSGSASRAQLQVFLRHQWFRTFRLYRDAADLLVNLTDVDEAA 174 (332)
T ss_dssp CCCCCSSCCCHHHHHHHHHHHHHC--C--CCCHHHHHHHHTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHTCCSHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHH--HCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHH
T ss_conf 633356656889999999998742--025789499998769999999999999998875166760999982699889999
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999-98664326799999999987189988872045777899999999997427889999999999985015899
Q T0627 87 EDMARRWL-MRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEW 165 (261)
Q Consensus 87 ~~~~~~~~-~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~ 165 (261)
.+..+++- .++...+..|..+|.++++++|++++. ....++|+|+++++.+...+...++..++|++ .+.|.+.|.+
T Consensus 175 ~l~~~l~DE~G~g~~~~~H~~l~~rl~ealGl~~d~-~~~~~lp~t~a~vn~~~~~~~~~~~~~avg~~-~~tEl~~P~i 252 (332)
T 3bjd_A 175 ALARYLYGELGEEDEKGSHPRLLAKLLEAIGLEADF-QAVSTMPEEIAYLNNRARAFRHAEVGWGLAVF-YITELVVPGN 252 (332)
T ss_dssp HHHHHHHHHTTTTCGGGCHHHHHHHHHHHTTCCCCT-TCCCCCHHHHHHHHHHHHHHHCSSTHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHH-HHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHCCHH
T ss_conf 999999997189876663899999999992998233-21145789999999999998154489999999-9999955377
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998766542035776656889999962485356899999999999753799989999999999999999999999998
Q T0627 166 SAVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQ 245 (261)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~ 245 (261)
+.......... + .++...+||+.|.+.|..|+..++.++.+.| ++++.|++++.+....|+.+|.++|..|+
T Consensus 253 ~~~~i~gl~r~---g--l~~~~l~yF~~Hi~~d~~ha~~~~~lV~~~~---~t~e~q~~al~al~~~~~~l~~~lDal~~ 324 (332)
T 3bjd_A 253 HEKLYRALLQA---G--LSEDQAEYYKVHISLVPPRAKREWQLIARRI---PDVQFQNAFLTSLSQHFRVERAYYDAIWE 324 (332)
T ss_dssp HHHHHHHHHHT---T--CCTTTTHHHHHHHHHCC---CTTHHHHHTTT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC---C--CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999984---9--9978989999998827798999999998658---99999999999999999999999999999
Q ss_pred HHHHCC
Q ss_conf 875258
Q T0627 246 LDKVKS 251 (261)
Q Consensus 246 ~e~~~~ 251 (261)
.=|..+
T Consensus 325 ~~~~~~ 330 (332)
T 3bjd_A 325 EMQSVK 330 (332)
T ss_dssp HHHHC-
T ss_pred HHHHHC
T ss_conf 998540
No 15
>3b5o_A CADD-like protein of unknown function; ZP_00108531.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.35A {Nostoc punctiforme pcc 73102} PDB: 3b5p_A*
Probab=99.87 E-value=5.9e-21 Score=150.93 Aligned_cols=212 Identities=12% Similarity=0.039 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHH--HHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999--998718478998568999899999999989999999999999987278876689999999999866
Q T0627 21 AQQLINDCSPAK--ARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNI 98 (261)
Q Consensus 21 s~~L~~~~~~~w--~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (261)
+++|.+..+..+ -.+.+|||++.|++|++ ++++.|+.|+|+|+++|++++..++..++..+.. ..+..+..|+
T Consensus 8 ~~~l~~~l~~~~~~~~~~~hP~~~~l~~~s~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~---~~~~~L~~Nl 82 (244)
T 3b5o_A 8 TKQLNQLLAQDYVAFSITENPVVQMLSQASF--AQIAYVMQQYSIFPKELVGFTELARRKALGAGWN---GVAQELQENI 82 (244)
T ss_dssp HHHHHHHHHHHCGGGCTTTCTTGGGTTTCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH---HHHHHHHHHH
T ss_conf 5999999999999864004849999983679--9999999999999999999999999866446876---7999999999
Q ss_pred HHHH-------HHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4326-------799999999987189988872045777899999999997427889999999999985015899999987
Q T0627 99 RVEL-------NHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCS 171 (261)
Q Consensus 99 ~~e~-------~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~ 171 (261)
.+|. .|..+|++++++.|. +++.+.+|.|+|+.+++.+..++.++. ..+++|+ ++.|+..+.....+..
T Consensus 83 ~eE~G~g~~~~~H~~L~~~~l~~~~~--~~~~~~~p~p~T~~~i~~~~~l~~~~~-~~~lgA~-~a~E~~~i~~~~~l~~ 158 (244)
T 3b5o_A 83 DEEMGSTTGGISHYTLLADGLEEGLG--VAVKNTMPSVATSKLLRTVLSLFDRQV-DYVLGAT-YAIEATSIPELTLIVK 158 (244)
T ss_dssp HHHTTTTTTTCCHHHHHHHHHHHHHC--CCCTTCCCCHHHHHHHHHHHHHHTSCH-HHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHCC--CCHHHCCCCHHHHHHHHHHHHHHCCCH-HHHHHHH-HHHHHHHHHHHHHHHH
T ss_conf 99857898876689999999997278--433206898799999999999984780-9999999-9866321189999999
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6654203577665688999996248-535689999999999975379998999999999999999999999999887
Q T0627 172 TGVYAEAFAEETRKKSMKWLKMHAQ-YDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLD 247 (261)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~w~~~h~~-~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e 247 (261)
..... ...+..+..+.||..|.+ .|++|+..+++++...+. +++..++.+.++..+.....|||...+.-
T Consensus 159 g~~~~--~~~~~~~~~~~ff~~Hi~e~D~eHa~~~~~ll~~~~~----~e~~~~i~~g~~~~Ld~~~~fW~~L~~~~ 229 (244)
T 3b5o_A 159 LVEWL--HEGAIPKDLQYFFSKHLDEWEIEHEAGLRTSVAAYIQ----PEEFGEFAAGFRAMIDAMQVWWQELAQEA 229 (244)
T ss_dssp HHHHH--CSSCCCHHHHHHHHHHHC-------CHHHHHHHTTCC----GGGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99986--3577875343599987855517799999999999879----47899999999999999999999999988
No 16
>1wzd_A Heme oxygenase; electron-transfer, metal, artificial metalloprotein, oxidoreductase; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 1wnw_A* 1wnx_A* 1wnv_A*
Probab=99.44 E-value=3.3e-11 Score=88.74 Aligned_cols=208 Identities=9% Similarity=0.021 Sum_probs=148.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 77626899999999999999871847899856899989999999998999999999999998727887668999999999
Q T0627 15 SSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWL 94 (261)
Q Consensus 15 ~~~p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~ 94 (261)
|..++++.+|++++++.=+++-+|||++.+..|+++++.++.||.|.|++....-..+..........
T Consensus 3 t~~~~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~~s~~~Y~~~L~~~~~~y~~lE~~l~~~~~~~~~~------------ 70 (215)
T 1wzd_A 3 TATAGLAVELKQSTAQAHEKAEHSTFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAE------------ 70 (215)
T ss_dssp ----CHHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHC------------
T ss_conf 88268999999999999999982769999877999999999999999999999999999714472000------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98664326799999999987189988872045777899999999997427889999999999985015899999987665
Q T0627 95 MRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGV 174 (261)
Q Consensus 95 ~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~ 174 (261)
.....+..........+..+|.+.......+|+|++..|++++..++...+|...++.+ |+.|.-...-++.+.+...
T Consensus 71 -~~~~~~~~R~~~l~~DL~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~llg~~-Yv~e~G~~~GGq~i~k~l~ 148 (215)
T 1wzd_A 71 -SLLDPALNRAEVLARDLDKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVDGPALVAHH-YVRYLGDLSGGQVIARMMQ 148 (215)
T ss_dssp -TTSCGGGCCHHHHHHHHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHHHHTCHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHCHHHHHHHH
T ss_conf -22465666556689999997177321015777734999999999988238999999999-9998888720438999999
Q ss_pred HHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42035776656889999962485356899999-9999997537999899999999999999999999999
Q T0627 175 YAEAFAEETRKKSMKWLKMHAQYDDAHPWEAL-EIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERC 243 (261)
Q Consensus 175 ~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~-~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~ 243 (261)
+.++. ++....||..|...|..|-.+.+ ..+++. ..++.+++++++.+..+.++....++..
T Consensus 149 --~~l~l--~~~~~~fy~f~~~~d~~~~k~~~r~~l~~~---~~~~~~~~~ii~eA~~aF~~~~~lf~eL 211 (215)
T 1wzd_A 149 --RHYGV--DPEALGFYHFEGIAKLKVYKDEYREKLNNL---ELSDEQREHLLKEATDAFVFNHQVFADL 211 (215)
T ss_dssp --HHHCC--CGGGCGGGCCTTCSCHHHHHHHHHHHHHTC---CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHCCC--CCCCCCCEECCCCCCHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --84199--987761012788688899999999998646---7999999999999999999999999987
No 17
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* 1xk1_A* ...
Probab=99.24 E-value=1.1e-09 Score=78.92 Aligned_cols=213 Identities=8% Similarity=0.045 Sum_probs=137.1
Q ss_pred CCCCC-HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 67762-68999999999999998718478998568999899999999989999999999999987278876689999999
Q T0627 14 ASSYP-AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARR 92 (261)
Q Consensus 14 ~~~~p-~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~ 92 (261)
+.+.| .+|++|.+.+...=+.+-++||++.+..|+++++.+..||.|.|++....-..+...... +.....
T Consensus 6 ~~~~~~~ls~~Lr~~T~~~H~~~E~~~~~~~l~~g~~s~~~Y~~~L~~~~~vy~~lE~~l~~~~~~-~~~~~~------- 77 (233)
T 1n45_A 6 PDSMPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKES-PVFAPV------- 77 (233)
T ss_dssp ----CCSHHHHHHHHTHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTTGGG-------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCC-------
T ss_conf 777877799999999999999998676999987699899999999999999999899999873266-301121-------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99986643267999999999871-89988872045777899999999997427889999999999985015899999987
Q T0627 93 WLMRNIRVELNHADYWVNWCAAH-DVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCS 171 (261)
Q Consensus 93 ~~~~~~~~e~~h~~l~~~~~~~~-Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~ 171 (261)
...++..........+..+ |.+.. ...+|+|+|..|++++..++.. +|...+| .+|+.|.--..-++.+.+
T Consensus 78 ----~~~~~l~R~~~l~~Dl~~l~g~~~~--~~~~~~~a~~~yv~~i~~~~~~-~P~~lla-~~YV~y~g~l~GGq~i~k 149 (233)
T 1n45_A 78 ----YFPEELHRKAALEQDLAFWYGPRWQ--EVIPYTPAMQRYVKRLHEVGRT-EPELLVA-HAYTRYLGDLSGGQVLKK 149 (233)
T ss_dssp ----CCHHHHCCHHHHHHHHHHHHCTTGG--GTSCCCHHHHHHHHHHHHHHHH-CGGGHHH-HHHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHCCHHHHHHHHHHHCCCCCC--CCCCCCHHHHHHHHHHHHHHHC-CHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_conf ----5978750137789899987498520--2477876799999999998750-9999999-999999888608899999
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 665420357766568899999624853568999-9999999975379998999999999999999999999999887
Q T0627 172 TGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWE-ALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLD 247 (261)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e 247 (261)
.. ...++.+.+...+.||..|...|..|--. ....++.+ ..++.+++++++.+..+.++....++...+.-
T Consensus 150 ~~--~~~l~l~~~~~~~~f~~~~~~~d~~~~k~~~r~~ld~~---~l~~~~~~~ii~eA~~aF~~~~~lf~eL~~~~ 221 (233)
T 1n45_A 150 IA--QKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSL---EMTPAVRQRVIEEAKTAFLLNIQLFEELQELL 221 (233)
T ss_dssp HH--HHHHCCCSCSCSCGGGCCTTCSCHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HH--HHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99--99708999887600002787467999999999998735---69999999999999999999999999999987
No 18
>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1
Probab=99.03 E-value=6.5e-08 Score=67.73 Aligned_cols=202 Identities=8% Similarity=-0.024 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999998718478998568999899999999989999999999999987278876689999999999866
Q T0627 19 AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNI 98 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (261)
.++++|.+.+++.-+.+-++||++.+..|.++++.++.|+.|.|+.....-..+. +..+......+ .
T Consensus 4 ~ls~~Lre~T~~~H~~aE~~~f~~~l~~g~ls~e~Y~~~L~~~y~vY~~LE~~~~----~~~~~~~~~~~---------~ 70 (240)
T 1we1_A 4 NLASQLREGTKKSHSMAENVGFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEEMA----KFKDHPILSHI---------Y 70 (240)
T ss_dssp CHHHHHHHHTHHHHHHHHTSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH----HTTTSTTGGGG---------C
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH----HCCCCCCHHHC---------C
T ss_conf 7999999999999999976589999875899999999999999999999999998----62467200010---------0
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 43267999999999871899888720457778999999999974278899999999999850158999999876654203
Q T0627 99 RVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEA 178 (261)
Q Consensus 99 ~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~ 178 (261)
..+..........+..+|.+. .-...+|.|++..|++++..++.. +|...+| .+|+.|.--..-++.+.+.... .
T Consensus 71 ~~~l~R~~~i~~DL~~l~g~~-~~~~~~~~~a~~~yv~~i~~~~~~-~P~~lla-h~Yv~ylgdlsGGq~i~~~~~~--~ 145 (240)
T 1we1_A 71 FPELNRKQSLEQDLQFYYGSN-WRQEVKISAAGQAYVDRVRQVAAT-APELLVA-HSYTRYLGDLSGGQILKKIAQN--A 145 (240)
T ss_dssp CTTSCCHHHHHHHHHHHHCTT-HHHHCCCCHHHHHHHHHHHHHHHH-CGGGHHH-HHHHHHHHHHHHHHHHHHHHHH--H
T ss_pred HHHHHHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHHC-CHHHHHH-HHHHHHHHHHHHHHHHHHHHHH--H
T ss_conf 056778999997799874876-424689987799999988765313-9999999-9999998872231888787887--3
Q ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5776656889999962485356899999999999753-7999899999999999999999999999
Q T0627 179 FAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGN-KPSLQLQAELRQAVTKSYDYMYLFLERC 243 (261)
Q Consensus 179 ~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~s~~~e~~f~D~~ 243 (261)
++.. +....|+..+...|..|.-..+ ...++. ..++.+++++++-+..+.++-...++..
T Consensus 146 l~l~--~~~~~fy~f~~~~d~~~~k~~~---r~~l~~~~l~~~~~~~iI~EA~~aF~ln~~lf~eL 206 (240)
T 1we1_A 146 MNLH--DGGTAFYEFADIDDEKAFKNTY---RQAMNDLPIDQATAERIVDEANDAFAMNMKMFNEL 206 (240)
T ss_dssp HTCS--SSSCGGGCCTTCSSHHHHHHHH---HHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC--CCCCCEEECCCCCCHHHHHHHH---HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3899--9872113368878799999999---99986267999999999999999999999999998
No 19
>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A*
Probab=99.01 E-value=2.3e-07 Score=64.23 Aligned_cols=210 Identities=7% Similarity=-0.054 Sum_probs=128.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 26899999999999999871847899856899989999999998999999999999998727887668999999999986
Q T0627 18 PAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRN 97 (261)
Q Consensus 18 p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~ 97 (261)
+.+|++|.+.+++.=+.+-++||++.+..|.++++.+..||.|.|+.-...-..+. ....+.. .....
T Consensus 2 ~~ls~~Lre~T~~~H~~aE~~~f~~~ll~g~~~~~~Y~~~L~~~y~vY~aLE~~l~---~~~~~~~---------~~~~~ 69 (250)
T 1wov_A 2 TNLAQKLRYGTQQSHTLAENTAYMKCFLKGIVEREPFRQLLANLYYLYSALEAALR---QHRDNEI---------ISAIY 69 (250)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTTSHH---------HHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HCCCCCC---------CCCCC
T ss_conf 43899999989999999976678999875898999999999999999999999998---7579852---------00013
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 64326799999999987189988872045777899999999997427889999999999985015899999987665420
Q T0627 98 IRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAE 177 (261)
Q Consensus 98 ~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~ 177 (261)
..+...+..+..++..-+|-+.+.. ..|.|++..|++++..++.. +|.. +.|.+|+.|.--..-++.+.+... .
T Consensus 70 ~~~l~R~~~l~~DL~~l~g~~~~~~--~~~~~a~~~Yv~~i~~l~~~-~P~~-llah~Yv~ylGdlsGGQiI~r~l~--~ 143 (250)
T 1wov_A 70 FPELNRTDKLAEDLTYYYGPNWQQI--IQPTPCAKIYVDRLKTIAAS-EPEL-LIAHCYTRYLGDLSGGQSLKNIIR--S 143 (250)
T ss_dssp CGGGCCHHHHHHHHHHHHCTTHHHH--CCCCHHHHHHHHHHHHHHHH-CGGG-HHHHHHHHHHHHTTHHHHHHHHHH--H
T ss_pred CHHHCCHHHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHHHHHHH-CHHH-HHHHHHHHHHHHHCCCHHHHHHHH--H
T ss_conf 6221030459988998727770204--78886799999999999863-9798-999999999887211157777776--5
Q ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3577665688999996248535689999999999975-37999899999999999999999999999988
Q T0627 178 AFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVG-NKPSLQLQAELRQAVTKSYDYMYLFLERCIQL 246 (261)
Q Consensus 178 ~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~-~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~ 246 (261)
.++.+ +.....|++.+...+..+..+..+.....++ ...++.+++++++-+..+.++-...++.....
T Consensus 144 ~l~l~-~~~g~~fy~F~~~~~~~d~~~fK~~~r~~l~~~~l~~~~~~~iI~EA~~aF~ln~~lf~eL~~~ 212 (250)
T 1wov_A 144 ALQLP-EGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSLPLDEATINRIVEEANYAFSLNREVMHDLEDL 212 (250)
T ss_dssp HTTCC-TTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred HCCCC-CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11589-8776401324777636579999999999986267999999999999999999999999999999
No 20
>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A*
Probab=98.96 E-value=6e-08 Score=67.96 Aligned_cols=208 Identities=8% Similarity=0.033 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999998718478998568999899999999989999999999999987278876689999999999866
Q T0627 19 AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNI 98 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (261)
.+|++|.+.+++.=+.+-+.+|++.+..|+++++.|..||.|.|++....-..+... +.+......+ ..
T Consensus 12 ~ls~~LreaT~~~H~~aE~~~f~~~l~~g~~~~~~Y~~~L~~~y~vY~~LE~~~~~~---~~~~~~~~~~-----~p--- 80 (267)
T 1j02_A 12 DLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERN---KQNPVYAPLY-----FP--- 80 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TTCTTTGGGC-----CH---
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCC-----CH---
T ss_conf 799999999999999997566999987699899999999999999999999999871---2475111113-----86---
Q ss_pred HHHHHHHHHHHHHHHHC-CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 43267999999999871-89988872045777899999999997427889999999999985015899999987665420
Q T0627 99 RVELNHADYWVNWCAAH-DVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAE 177 (261)
Q Consensus 99 ~~e~~h~~l~~~~~~~~-Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~ 177 (261)
.+..........++.+ |-+ .....+|.|++..|++++..++.. +|...+ |.+|+.|.--..-++.+.+.. ..
T Consensus 81 -~el~R~~~l~~DL~~l~g~~--~~~~~~~~~a~~~yv~~i~~i~~~-~P~~ll-ah~YvrylGdlsGGq~I~k~~--~k 153 (267)
T 1j02_A 81 -EELHRRAALEQDMAFWYGPH--WQEAIPYTPATQHYVKRLHEVGGT-HPELLV-AHAYTRYLGDLSGGQVLKKIA--QK 153 (267)
T ss_dssp -HHHCCHHHHHHHHHHHHCTT--GGGTSCCCHHHHHHHHHHHHHHHH-CGGGHH-HHHHHHHHHHTTHHHHHHHHH--HH
T ss_pred -HHHHHHHHHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHHHHHHH-CHHHHH-HHHHHHHHHHHHHHHHHHHHH--HH
T ss_conf -76423267998999981764--324678867789999999876430-999999-999999989872689999999--99
Q ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35776656889999962485356899999999999753-79998999999999999999999999999887
Q T0627 178 AFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGN-KPSLQLQAELRQAVTKSYDYMYLFLERCIQLD 247 (261)
Q Consensus 178 ~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e 247 (261)
.++.+.+...+.||..+...|..+- ...+...++. ..++.+++++++-+..+.++-...++.....-
T Consensus 154 ~l~lp~~g~gl~fy~f~~~~d~~~~---K~~~r~~ld~l~l~~~e~~~iI~EA~~aF~~n~~lf~eL~~~~ 221 (267)
T 1j02_A 154 AMALPSSGEGLAFFTFPSIDNPTKF---KQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALL 221 (267)
T ss_dssp HHTCCTTCTTCGGGCCTTCSCHHHH---HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCEEEECCCCCCHHHH---HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7199987765102324786889999---9999999970679999999999999999999999999999999
No 21
>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure initiative, PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*
Probab=98.82 E-value=1.1e-06 Score=59.84 Aligned_cols=208 Identities=6% Similarity=0.026 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999998718478998568999899999999989999999999999987278876689999999999866
Q T0627 19 AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNI 98 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (261)
.+|+.|...+++.=+.+-++||++.+..|+++++.++.||.|.|++-...-..+.. ...++.....+. ...+
T Consensus 32 ~ls~~Lre~T~~~H~~aE~~~f~~~l~~G~l~~~~Y~~~L~~~y~vY~~LE~~l~~---~~~~~~~~~~~~-~~~L---- 103 (264)
T 2q32_A 32 DLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMER---NKDHPAFAPLYF-PMEL---- 103 (264)
T ss_dssp SHHHHHHHHSHHHHHHHHTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTTCTTTGGGCC-HHHH----
T ss_pred CHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCC-CHHH----
T ss_conf 49999999999999999746999998778989999999999999999999999986---457741000148-4655----
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 43267999999999871899888720457778999999999974278899999999999850158999999876654203
Q T0627 99 RVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEA 178 (261)
Q Consensus 99 ~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~ 178 (261)
..-..+..++..-.|-+.. ...+|.|+|..|++++..++.. +|...+| .+|+.|.--..-++.+.+.. ...
T Consensus 104 ---~R~~~l~~DL~~l~g~~~~--~~~~~~~at~~yv~~i~~i~~~-~P~~llA-h~YvrylGdlsGGQiI~k~l--~~~ 174 (264)
T 2q32_A 104 ---HRKEALTKDMEYFFGENWE--EQVQAPKAAQKYVERIHYIGQN-EPELLVA-HAYTRYMGDLSGGQVLKKVA--QRA 174 (264)
T ss_dssp ---CCHHHHHHHHHHHHCTTGG--GGCCCCHHHHHHHHHHHHHHHH-CGGGHHH-HHHHHHHHHHHHHHHHHHHH--HHH
T ss_pred ---HHHHHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHH-CHHHHHH-HHHHHHHHHHHHHHHHHHHH--HHH
T ss_conf ---6558789999985378843--4678887899999999998731-9999999-99999999964369999999--997
Q ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 577665688999996248535689999999999975-37999899999999999999999999999988
Q T0627 179 FAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVG-NKPSLQLQAELRQAVTKSYDYMYLFLERCIQL 246 (261)
Q Consensus 179 ~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~-~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~ 246 (261)
++.+.+...+.|+..+...|... ....+...++ -.-++.+++++++-+..+.++-...++..-+.
T Consensus 175 l~l~~~~~~~~Fy~f~~~~~~~~---~K~~~r~~ld~l~l~~~~~~~ii~EA~~aF~~n~~if~eL~~~ 240 (264)
T 2q32_A 175 LKLPSTGEGTQFYLFENVDNAQQ---FKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240 (264)
T ss_dssp HTCCTTCTTCGGGCCTTCSCHHH---HHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HCCCCCCCCEEEEECCCCCCHHH---HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999888501342677678999---9999999986057998999999999999999999999999875
No 22
>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*
Probab=98.16 E-value=0.00033 Score=44.06 Aligned_cols=191 Identities=11% Similarity=0.014 Sum_probs=116.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 26899999999999999871847899856899989999999998999999999999998727887668999999999986
Q T0627 18 PAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRN 97 (261)
Q Consensus 18 p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~ 97 (261)
..|+++|+.++++.=+++-+- ..+.+|.++++.++.||.+.|.+....-..+... ... . .+.
T Consensus 9 ~~~~~rLR~~Tr~~H~~le~~---~~~~~~~~~~~~Y~~~L~~~~~~y~~lE~~l~~~-------~~~----~--~~~-- 70 (209)
T 1j77_A 9 LTFAKRLKADTTAVHDSVDNL---VMSVQPFVSKENYIKFLKLQSVFHKAVDHIYKDA-------ELN----K--AIP-- 70 (209)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH---HHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHTCH-------HHH----H--HST--
T ss_pred CCHHHHHHHHHHHHHHHHHCC---HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-------CCC----C--CCC--
T ss_conf 789999999999999999874---8762567999999999999999999999999846-------556----4--445--
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 64326799999999987189988872045777899999999997427889999999999985015899999987665420
Q T0627 98 IRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAE 177 (261)
Q Consensus 98 ~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~ 177 (261)
...+........+.+..+|.++.......+. .++...++. +|+.|+...- ++.+.+....
T Consensus 71 ~~~~~~R~~~L~~DL~~lg~~~~~~~~~~~~----------------~~~a~~lG~-~YV~eGs~lG-Gq~i~r~~~~-- 130 (209)
T 1j77_A 71 ELEYMARYDAVTQDLKDLGEEPYKFDKELPY----------------EAGNKAIGW-LYCAEGSNLG-AAFLFKHAQK-- 130 (209)
T ss_dssp TGGGGCCHHHHHHHHHHTTCCCCCCSSCCCC----------------CCHHHHHHH-HHHHHHHHHT-THHHHHHHHT--
T ss_pred CHHHHCCHHHHHHHHHHHCCCHHHCCCCCCC----------------CCHHHHHHH-HHHHHHHHHH-HHHHHHHHHH--
T ss_conf 5665126699997899847882540557777----------------988999999-9999855889-9999999998--
Q ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 35776656889999962485356899999999999753799989999999999999999999999998875258
Q T0627 178 AFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDKVKS 251 (261)
Q Consensus 178 ~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~~~~ 251 (261)
... .+.....||..|...+..+-......+++ ...++.+++++++.+..+.+++...++..........
T Consensus 131 -~~~-~~~~~~~f~~~~~~~~~~~w~~f~~~Ld~---~~~~~~~~~~ii~~A~~aF~~~~~~l~e~~~~~a~~~ 199 (209)
T 1j77_A 131 -LDY-NGEHGARHLAPHPDGRGKHWRAFVEHLNA---LNLTPEAEAEAIQGAREAFAFYKVVLRETFGLAADAE 199 (209)
T ss_dssp -TTC-BTTBBCGGGSCCTTCHHHHHHHHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCC
T ss_pred -CCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC
T ss_conf -058-98400255425564668999999999974---8999999999999999999999999998612343203
No 23
>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidoreductase; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2
Probab=96.83 E-value=0.022 Score=32.48 Aligned_cols=190 Identities=12% Similarity=0.011 Sum_probs=113.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCHHHHHHHH
Q ss_conf 77677626899999999999999871847899856899989999999998999999999999998--7278876689999
Q T0627 12 MEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNL--TKTRFGRHPGEDM 89 (261)
Q Consensus 12 ~~~~~~p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~la~~~--~~~~~~~~~~~~~ 89 (261)
.+.+..+-+|++|...+++.=+++-+++... .+-.+++.++.||.+.|.+.+..-..+.... ...++.
T Consensus 6 p~~~~~~~~s~rLr~~T~~~H~~le~~~~~~---~~~~~~~~Y~~~L~~~~~~y~~lE~~~~~~~~~~~~~~~------- 75 (198)
T 1sk7_A 6 PESTRQNLRSQRLNLLTNEPHQRLESLVKSK---EPFASRDNFARFVAAQYLFQHDLEPLYRNEALARLFPGL------- 75 (198)
T ss_dssp ------CCHHHHHHHHTHHHHHHHHHHHHHH---CTTSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHSTTG-------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH---HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH-------
T ss_conf 8766642699999999999999998042232---213899999999999999999999999856446544540-------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986643267999999999871899888720457778999999999974278899999999999850158999999
Q T0627 90 ARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAVV 169 (261)
Q Consensus 90 ~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~~ 169 (261)
.+........+.+..+|......... +. ....++...++++ |++|+...- ++.+
T Consensus 76 ----------~~~~R~~~L~~DL~~L~~~~~~~~~~-~~-------------~~~~~~a~~lg~~-YV~eGs~lG-Gq~i 129 (198)
T 1sk7_A 76 ----------ASRARDDAARADLADLGHPVPEGDQS-VR-------------EADLSLAEALGWL-FVSEGSKLG-AAFL 129 (198)
T ss_dssp ----------GGGCCHHHHHHHHHHHTCCCCCCCCT-TT-------------TSCCCHHHHHHHH-HHHHHTTTT-HHHH
T ss_pred ----------HHHHHHHHHHHHHHHCCCCCCCCCCC-CC-------------CCCCCHHHHHHHH-HHHHHHHHH-HHHH
T ss_conf ----------78886799999998637998634678-88-------------6656889999999-999998866-8999
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 876654203577665688999996248535689999999999975379998999999999999999999999999
Q T0627 170 CSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCI 244 (261)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y 244 (261)
.+...... . .+.....||..+... ....|......+-....++.+++++++.+..+.++....++.+|
T Consensus 130 ~r~l~~~~---~-~~~~g~~ff~~~~~~---~~~~w~~f~~~L~~~~~~~~~~~~~i~~A~~~F~~~~~~~~e~~ 197 (198)
T 1sk7_A 130 FKKAAALE---L-DENFGARHLAEPEGG---RAQGWKSFVAILDGIELNEEEERLAAKGASDAFNRFGDLLERTF 197 (198)
T ss_dssp HHHHGGGT---C-BTTBBCGGGSCCTTC---HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHC---C-CCCCCCHHHCCCCCC---CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999816---9-996443221678766---48999999999875899999999999999999999999999973
No 24
>3ge3_A Toluene-4-monooxygenase system protein A; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} PDB: 3ge8_A 3dhi_A* 3dhh_A* 3dhg_A* 3i5j_A 3i63_A
Probab=95.18 E-value=0.13 Score=27.46 Aligned_cols=185 Identities=6% Similarity=-0.045 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-----CCC
Q ss_conf 999999999899999999999999872788766899999999998664326799999999987189988872-----045
Q T0627 52 QIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLH-----DQR 126 (261)
Q Consensus 52 e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~-----~~~ 126 (261)
+.++.++..--+.-..-.+..+.++..+|....+.- ..-..-.|.+|......++..++-...... ...
T Consensus 91 e~Lk~~l~~~~~~Ey~A~~~~A~l~r~ap~~~~R~a------aa~Q~~DElRHaQ~~~~l~~~~~~~~~~f~~a~k~~~~ 164 (500)
T 3ge3_A 91 STLKSHYGAIAVGEYAAVTGEGRMARFSKAPGNRNM------ATFGMMDELRHGQLQLFFPHEYCKKDRQFDWAWRAYHS 164 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHH------HHHHHHHHHHHHHHHHHHHHTTTTTCGGGGHHHHGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
T ss_conf 999999840328999999999999986798889999------99999999999999999999972336565567787642
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 77789999999999742788999999999998501589999-99876654203577665688999996248535689999
Q T0627 127 VAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSA-VVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEA 205 (261)
Q Consensus 127 p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~ 205 (261)
..|..+...+++-++....++.+.+.++..++|........ ....... .+.|....+.+..=.+..-+|..-.
T Consensus 165 ~~p~~q~~R~~fEd~l~~~dw~E~~valn~v~E~~~tnL~~v~f~~~Aa------~nGD~~~~tv~~siqsDEaRH~~~G 238 (500)
T 3ge3_A 165 NEWAAIAAKHFFDDIITGRDAISVAIMLTFSFETGFANMQFLGLAADAA------EAGDYTFANLISSIQTDESRHAQQG 238 (500)
T ss_dssp CCHHHHHHHHHHHHHTTSSCHHHHHHHTCCCCCCCCHHHHHTHHHHHHH------HTTCHHHHHHHHHHHHHHHHHGGGH
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4800689999998776138889998878765786443789988899998------7468769999999988999999858
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999753799989999999999999999999999998875
Q T0627 206 LEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDK 248 (261)
Q Consensus 206 ~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~ 248 (261)
...+..+++....+..|+.+-..|-++.++.-.+--..+.+-.
T Consensus 239 ~~~lk~l~e~~n~~~lQ~~vd~wfwr~~~~~~~l~G~~~dY~~ 281 (500)
T 3ge3_A 239 GPALQLLIENGKREEAQKKVDMAIWRAWRLFAVLTGPVMDYYT 281 (500)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999967766999999999999889999988888888448
No 25
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A 1uzr_A*
Probab=84.14 E-value=1.6 Score=20.51 Aligned_cols=213 Identities=9% Similarity=-0.070 Sum_probs=124.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHCHH---HHHHHCCCCCHHHHHHHHHHHHHHHHHHHH----HHH-HHHHHCCCHHHHHHHH
Q ss_conf 26899999999999999871847---899856899989999999998999999999----999-9987278876689999
Q T0627 18 PAWAQQLINDCSPAKARVVEHEL---YQQMRDAKLSPQIMRQYLIGGWPVVEQFAV----YMA-KNLTKTRFGRHPGEDM 89 (261)
Q Consensus 18 p~~s~~L~~~~~~~w~~~~~HPF---~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r----~la-~~~~~~~~~~~~~~~~ 89 (261)
-+|...||+......=.-.+.|| ++.+. +|+++.-..|.. -.-++...-. .+. ......+.++.+..+.
T Consensus 26 ~~~~~~ly~~~~~nfW~peEidls~D~~dw~--~Lt~~Er~~~~~-~l~~~~~~D~~v~~~~~~~~~~~~~~~e~~~~l~ 102 (329)
T 3dhz_A 26 DEKDLEVWDRLTGNFWLPEKIPVSNDIQSWN--KMTPQEQLATMR-VFTGLTLLDTIQGTVGAISLLPDAETMHEEAVYT 102 (329)
T ss_dssp SHHHHHHHHHHHHTCCCGGGSCGGGGHHHHH--TSCHHHHHHHHH-HHHHHHHHHHHHHHTHHHHTGGGCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--HCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 4889999999996799973458276599998--699999999999-9999999999998530888877658789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH---HHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986643267999999999871899888---720457778999999999974278899999999999850158999
Q T0627 90 ARRWLMRNIRVELNHADYWVNWCAAHDVTLED---LHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWS 166 (261)
Q Consensus 90 ~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~---l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~ 166 (261)
.....|..|.+.|...++.++.+++. .......|.....+.++.......++...+.|. .++|++.-..+
T Consensus 103 ------~q~~~E~iH~~sYs~il~~~~~~~~~~e~f~~~~~~~~l~~k~~~~~~~~~~~~~~~~~va~-~~lEGi~f~sg 175 (329)
T 3dhz_A 103 ------NIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYYNGDDPLKKKVAS-TLLESFLFYSG 175 (329)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHTSSCHHHHHHHH-HHHHHTTTHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHH
T ss_conf ------99999999999999999992997779999998731899999999999860583799999999-99999999889
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99987665420357766568899999624853568999999999997537999---899999999999999999999999
Q T0627 167 AVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSL---QLQAELRQAVTKSYDYMYLFLERC 243 (261)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~---~~~~~~~~~~~~s~~~e~~f~D~~ 243 (261)
-........++. . +-..+=++.=...+-.|..=...++..+....+.. +.++.+.+.++...+.|..|.+.+
T Consensus 176 F~~~~~l~~~g~--m---~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~e~~e~~~~e~~~~i~~~~~e~v~~E~~~~~~~ 250 (329)
T 3dhz_A 176 FYLPMYLSSRAK--L---TNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDI 250 (329)
T ss_dssp HHHHHHHHTTTS--S---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC--C---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999976798--8---62899999996205889999999999997638898899889999999999999999999988
Q ss_pred HH
Q ss_conf 98
Q T0627 244 IQ 245 (261)
Q Consensus 244 y~ 245 (261)
+.
T Consensus 251 ~~ 252 (329)
T 3dhz_A 251 YD 252 (329)
T ss_dssp HT
T ss_pred HC
T ss_conf 64
No 26
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=81.75 E-value=2 Score=19.92 Aligned_cols=194 Identities=13% Similarity=0.096 Sum_probs=103.1
Q ss_pred HHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9987184789985689998999999999899999999999--------99987278876689999999999866432679
Q T0627 33 ARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYM--------AKNLTKTRFGRHPGEDMARRWLMRNIRVELNH 104 (261)
Q Consensus 33 ~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~r~l--------a~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~h 104 (261)
....+||-++++. .+.=+.++.+-+.+.....-++ +..+.+-.-. .......+......+.+|-.|
T Consensus 66 vPf~~hP~~~al~-----~e~R~rll~~~~~~~n~~~i~~E~~iv~pa~~~i~~~~~~-~~~~~~~~~~a~q~lvDE~~H 139 (336)
T 3chh_A 66 VPFAEHPLFLAAE-----PHQRQRVLTGMWIGYNERVIATEQLIAEPAFDLVMHGVFP-GSDDPLIRKSVQQAIVDESFH 139 (336)
T ss_dssp CTTTTCHHHHTSC-----HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCST-TTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHH
T ss_conf 8766697777379-----9999999999999999879999999999999998713368-899889999999999999999
Q ss_pred HHHHHHHHHH----CCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999987----1899888720457778999999999974278899----9999999998501589999998766542
Q T0627 105 ADYWVNWCAA----HDVTLEDLHDQRVAPELHALSHWCWQTSSSDSLA----VAMAATNYAIEGATGEWSAVVCSTGVYA 176 (261)
Q Consensus 105 ~~l~~~~~~~----~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~~~----~~laA~~~~~E~~~~~~~~~~~~~~~~~ 176 (261)
..++.++++. .|+.+ .++.|....+-...-..+...... ..++..+ +.|.++......+.
T Consensus 140 tlm~~~~~~~~~~~~g~~~-----~~~~P~~~~~r~~~~~la~~~~~~er~l~~~a~~~-V~E~~I~~~l~~~~------ 207 (336)
T 3chh_A 140 TYMHMLAIDRTRELRKISE-----RPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGA-VAETCINALLALLA------ 207 (336)
T ss_dssp HHHHHHHHHHHHHHTTCCC-----CCCCCCCHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HHHHSBCHHHHHHH------
T ss_pred HHHHHHHHHHHHHHCCCCC-----CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHC------
T ss_conf 9999999999998507887-----77896136788889998634311332699999999-97578999999860------
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q ss_conf 035776656889999962485356899999999999753799989999999999999999----99999999887
Q T0627 177 EAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYM----YLFLERCIQLD 247 (261)
Q Consensus 177 ~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e----~~f~D~~y~~e 247 (261)
-+..+.+--..-.+.|..++-.|+.=+.+.+...... .++.++.-+...+-.++..+ ...|..+|+.-
T Consensus 208 --~D~~iqP~vr~v~~iH~~DEaRHisfare~lr~~~~~-l~~~~R~~~~~~l~~~l~~f~~~d~~~~~~v~~~~ 279 (336)
T 3chh_A 208 --RDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYAR-MNEQQRRALVRCLPIALEAFAEQDLSALLLELNAA 279 (336)
T ss_dssp --TCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHCCCTHHHHHHHHHH
T ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
T ss_conf --5876684999999999999999999999999999986-99999999999999999999861324779999886
No 27
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=78.40 E-value=2.6 Score=19.23 Aligned_cols=193 Identities=9% Similarity=-0.013 Sum_probs=102.1
Q ss_pred CCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCCCH
Q ss_conf 6899989---99999999899999999999999872788766899999999998664326799999999---98718998
Q T0627 46 DAKLSPQ---IMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIRVELNHADYWVNW---CAAHDVTL 119 (261)
Q Consensus 46 ~G~L~~e---~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~l~~~~---~~~~Gi~~ 119 (261)
..+++++ .++.++.|.-|--..-....|.++.-+|....+.-... ..-.|-+|.+....+ +..-+.++
T Consensus 78 ~~~~dprw~~~lk~~ls~~~hgE~gA~l~~A~l~~~apt~~ak~~aa~------Qt~DEaRH~q~~~~~~~~~~~~~~~~ 151 (512)
T 1mty_D 78 GVRVHPKWNETMKVVSNFLEVGEYNAIAATGMLWDSAQAAEQKNGYLA------QVLDEIRHTHQCAYVNYYFAKNGQDP 151 (512)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 002798999999998623157999999999999975786889999999------75579999999999999998548886
Q ss_pred HHHH----CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 8872----04577789999999999742788999999999998501589-999998766542035776656889999962
Q T0627 120 EDLH----DQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGE-WSAVVCSTGVYAEAFAEETRKKSMKWLKMH 194 (261)
Q Consensus 120 e~l~----~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~~h 194 (261)
.... --...|..++.-+.+-++...+++.+.+.++..++|...-. ........... +.|......+..=
T Consensus 152 ~~~~~~~~~~~~~Pi~~~lr~lfdd~l~~~Dw~e~~ial~~v~E~~ftnL~fvaf~~~Aa~------nGD~~~~tl~~Si 225 (512)
T 1mty_D 152 AGHNDARRTRTIGPLWKGMKRVFSDGFISGDAVECSLNLQLVGEACFTNPLIVAVTEWAAA------NGDEITPTVFLSI 225 (512)
T ss_dssp TTTTTHHHHGGGSSHHHHHHHHHTHHHHSSCHHHHHHHHTTTHHHHTHHHHHHHHHHHHHH------TTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH------CCCHHHHHHHHHH
T ss_conf 2256778972005157889999998875388899998776237750007899999999998------5893499999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 485356899999999999753799-98999999999999999999999999887525
Q T0627 195 AQYDDAHPWEALEIICTLVGNKPS-LQLQAELRQAVTKSYDYMYLFLERCIQLDKVK 250 (261)
Q Consensus 195 ~~~D~~h~~e~~~~i~~~~~~~~~-~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~~~ 250 (261)
.+.+-+|+.-+...|..++.+... +..|..+-.+|-++-++.-.+--..+.+-...
T Consensus 226 qsDEaRH~~~g~~tL~~~l~~~~n~~~~q~~id~aFWr~~r~~~~l~G~~mDY~tp~ 282 (512)
T 1mty_D 226 ETDELRHMANGYQTVVSIANDPASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKF 282 (512)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 988877643429999999856203799999999999988889999998887726886
No 28
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune evasion, replication; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 2ani_A
Probab=71.74 E-value=3.8 Score=18.15 Aligned_cols=220 Identities=12% Similarity=0.116 Sum_probs=113.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHC---CCCCHHHHHHHHHHHHHHHHH----HHHHHHHHHHHCCCHHHHH
Q ss_conf 677626899999999999999871847899856---899989999999998999999----9999999987278876689
Q T0627 14 ASSYPAWAQQLINDCSPAKARVVEHELYQQMRD---AKLSPQIMRQYLIGGWPVVEQ----FAVYMAKNLTKTRFGRHPG 86 (261)
Q Consensus 14 ~~~~p~~s~~L~~~~~~~w~~~~~HPF~~~l~~---G~L~~e~f~~yl~Qdy~yl~~----f~r~la~~~~~~~~~~~~~ 86 (261)
|--+|.+-+--.+...--| .-.+.||-+++.+ ++|+.+.-..+..--..+... ...+.......++.++...
T Consensus 33 PikYp~~~~~ykk~~~~fW-~peEi~ls~D~~dw~t~kL~~~Er~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~~E~~~ 111 (346)
T 1syy_A 33 PIKYKWAWEHYLNGCANNW-LPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQ 111 (346)
T ss_dssp SCCCHHHHHHHHHHHHTCC-CGGGSCCHHHHHHHHSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCC-CCHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 9877799999999997699-940027613498885489999999999999999998999998888998872178599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC-CCCHHHHHHHHHHHHHHC--------CCC------HHHHH
Q ss_conf 999999999866432679999999998718998887204-577789999999999742--------788------99999
Q T0627 87 EDMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQ-RVAPELHALSHWCWQTSS--------SDS------LAVAM 151 (261)
Q Consensus 87 ~~~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~-~p~p~t~ay~~~l~~~a~--------~~~------~~~~l 151 (261)
.+. ...-+|.-|.+.|...++.++.+++++.+. ...|....-.++....-. ... ....+
T Consensus 112 ~~~------~~~~~E~iHs~sYs~i~~~l~~d~~e~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (346)
T 1syy_A 112 YLL------RQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNL 185 (346)
T ss_dssp HHH------HHHHHHHHHHHHHHHHHHHHTCCHHHHTTHHHHCHHHHHHHHHHHHTTSGGGSTTCCSSSHHHHHHHHHHH
T ss_pred HHH------HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 999------99999888999999999984667899999983089999999999986641003331214445589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC---CHHHHHHHHHH
Q ss_conf 999999850158999999876654203577665688999996248535689999999999975379---99899999999
Q T0627 152 AATNYAIEGATGEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKP---SLQLQAELRQA 228 (261)
Q Consensus 152 aA~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~---~~~~~~~~~~~ 228 (261)
.+...+.|+..-..+-...-.....+.. ..-.....|+. .++-.|..-...++..+....+ ++..++++.+.
T Consensus 186 ~~~~~~lEgi~f~s~F~~~~~l~~~g~m--~g~~~~i~~I~---RDE~lH~~f~~~l~~~l~~e~~~~~~~~~~~~i~~~ 260 (346)
T 1syy_A 186 VGYYIIMEGIFFYSGFVMILSFHRQNKM--IGIGEQYQYIL---RDETIHLNFGIDLINGIKEENPEIWTPELQQEIVEL 260 (346)
T ss_dssp HHHHTTTTTTHHHHHHHHHHHHHHTTSS--HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999899985199999998744553--20799888885---215678889999999986500987521389999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998
Q T0627 229 VTKSYDYMYLFLERCIQ 245 (261)
Q Consensus 229 ~~~s~~~e~~f~D~~y~ 245 (261)
+..+++.|..|.+.++.
T Consensus 261 ~~eave~E~~~~~~~~~ 277 (346)
T 1syy_A 261 IKRAVDLEIEYAQDCLP 277 (346)
T ss_dssp HHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHCC
T ss_conf 99999999999999667
No 29
>3ez0_A Uncharacterized protein with ferritin-like fold; YP_832262.1, protein of unknown function with ferritin-like fold, structural genomics; HET: UNL TLA; 2.33A {Arthrobacter SP}
Probab=71.53 E-value=3.9 Score=18.12 Aligned_cols=133 Identities=13% Similarity=0.145 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999987278876689999999999866432679999999998718998887204577789999999999742788
Q T0627 67 QFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDS 146 (261)
Q Consensus 67 ~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~ 146 (261)
.|.| ++.-+.++|+.+.+.. +......+.+|...+.+.+..+|.++.+.... -+.+.+.+......++
T Consensus 30 ~~~R-lae~~~~AP~Lee~ia------la~~A~de~gh~~~l~~~l~~~g~d~~~~~~~-----~~~~~~~~~~~~~~~d 97 (225)
T 3ez0_A 30 AFER-FSADARYSPTLHDRAV------LGRIAVVEFRHYELVSARLEAMGIDAEDAMLP-----FQAAVDYFHSRTRPAD 97 (225)
T ss_dssp HHHH-HHHHHTTCSSSTTHHH------HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGG-----GHHHHHHHHHTCCCSS
T ss_pred HHHH-HHHHHHHCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH-----HHHHHHHHHHHCCCCC
T ss_conf 9999-9988854998788999------99999999999999999999849897999998-----7356889987289998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 9999999999985015899999987665420357766568899999624853568999999999997537999899999
Q T0627 147 LAVAMAATNYAIEGATGEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAEL 225 (261)
Q Consensus 147 ~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~ 225 (261)
+.+.++-. |...+........+ ..+.+.+...-+.-=.. +..|..-..+.+..+++.++ +.+.|+
T Consensus 98 W~e~lvk~-~l~d~~~~d~~~~l----------a~~~d~~la~i~~kvl~-E~~h~~~~~~~l~~~i~~d~--~~~~RL 162 (225)
T 3ez0_A 98 WYESLMKA-YVIDTVSADFYRAI----------SRYVDAGTRDVIEQIQA-SDETTEVLRERLRSALADDP--RLASRL 162 (225)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHH----------TTTSCHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHCT--THHHHH
T ss_pred HHHHHHHH-HHHHHHHHHHHHHH----------HHCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCC--HHHHHH
T ss_conf 89999999-99999999999999----------82688899999999863-43289999999999985481--367899
No 30
>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 2rdb_A*
Probab=63.59 E-value=5.6 Score=17.11 Aligned_cols=116 Identities=9% Similarity=0.022 Sum_probs=79.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 777899999999997427889999999999985015899999-9876654203577665688999996248535689999
Q T0627 127 VAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSAV-VCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEA 205 (261)
Q Consensus 127 p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~ 205 (261)
-.+.....-+++-++...+++.+.+.|+..++|.......-. +.+... ...|...-..+.+=.+...+|....
T Consensus 164 ~~~~~~~~R~~fEd~~~~~D~~E~~valn~vfE~~ftnllfv~~~~~Aa------~nGD~~t~t~~~S~QsDE~RH~~~g 237 (491)
T 2inc_A 164 NEWAAIAARSFFDDMMMTRDSVAVSIMLTFAFETGFTNMQFLGLAADAA------EAGDHTFASLISSIQTDESRHAQQG 237 (491)
T ss_dssp CCHHHHHHHHHHHHHTTSSCHHHHHHHCCCCCCCTTHHHHHHHHHHHHH------HTTCHHHHHHHHHHHHHHHHHHTTH
T ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHH------HCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 4368888999988764138889999999876886403044630417788------7364578999999862188887604
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999753799989999999999999999999999998875
Q T0627 206 LEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLDK 248 (261)
Q Consensus 206 ~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~e~~f~D~~y~~e~ 248 (261)
..++.-++++...+..|+-+-.+|-++-++...+--..+.+-.
T Consensus 238 ~~~l~~l~~~~~~~~~q~~ld~~fW~~~r~l~~lvG~~mDY~t 280 (491)
T 2inc_A 238 GPSLKILVENGKKDEAQQMVDVAIWRSWKLFSVLTGPIMDYYT 280 (491)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999848872889999999999998999999988887438
No 31
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=56.23 E-value=7.5 Score=16.30 Aligned_cols=215 Identities=9% Similarity=0.022 Sum_probs=110.2
Q ss_pred CCCCHHHHHHHHHHH-HHHHHHHHCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHH----HHHHHHHHHHCCCHHHHHHH
Q ss_conf 776268999999999-99999871847899856-8999899999999989999999----99999998727887668999
Q T0627 15 SSYPAWAQQLINDCS-PAKARVVEHELYQQMRD-AKLSPQIMRQYLIGGWPVVEQF----AVYMAKNLTKTRFGRHPGED 88 (261)
Q Consensus 15 ~~~p~~s~~L~~~~~-~~w~~~~~HPF~~~l~~-G~L~~e~f~~yl~Qdy~yl~~f----~r~la~~~~~~~~~~~~~~~ 88 (261)
..+| |.-.+++... -.| .-.+-||-++..+ -+|+.+.-. ++..-..++... ..+...++...+.++....+
T Consensus 36 ikY~-~~~~~y~k~~~~fW-~peEi~l~~D~~dw~~Lt~~Ek~-~~~~il~~f~~~D~~~~~~~~~~~~~~~~~E~~~~~ 112 (346)
T 2rcc_A 36 VRFS-WAYPLYKNMLANFW-TPFEINMSHDAKQFPTLTETEQE-AFKKIIGLLAFLDSVQTDYSMRAAEYLTDSSLAALM 112 (346)
T ss_dssp CSBT-THHHHHHHHHHTCC-CGGGSCCHHHHHHGGGSCHHHHH-HHHHHHHHHHHTTTTCCCHHHHHHTTBCCHHHHHHH
T ss_pred CCCH-HHHHHHHHHHHCCC-CCCCCCHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 5768-99999999997799-96430625218999879999999-999999999998876513689999866799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH--HH-HCCCCCHHHHHHHHHHH----HHHCCCC---HHHHHHHHHHHH
Q ss_conf 99999998664326799999999987189988--87-20457778999999999----9742788---999999999998
Q T0627 89 MARRWLMRNIRVELNHADYWVNWCAAHDVTLE--DL-HDQRVAPELHALSHWCW----QTSSSDS---LAVAMAATNYAI 158 (261)
Q Consensus 89 ~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e--~l-~~~~p~p~t~ay~~~l~----~~a~~~~---~~~~laA~~~~~ 158 (261)
.. ....|..|.+.|-..++.++.+++ ++ ......|..+....+.. ......+ +...+.+. .+.
T Consensus 113 ~~------~~~~E~iH~~~Ys~il~~l~~~~~~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~lv~~-~~l 185 (346)
T 2rcc_A 113 SV------LSFQEVVHNQSYSYVLSSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYD-VIL 185 (346)
T ss_dssp HH------HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHH-HHH
T ss_pred HH------HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH-HHH
T ss_conf 99------99999999999999999965761089999999862466778999999888530165578999999999-998
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHH
Q ss_conf 5015899999987665420357766568899999624853-5689999999999975379---99899999999999999
Q T0627 159 EGATGEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHAQYD-DAHPWEALEIICTLVGNKP---SLQLQAELRQAVTKSYD 234 (261)
Q Consensus 159 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D-~~h~~e~~~~i~~~~~~~~---~~~~~~~~~~~~~~s~~ 234 (261)
|++.-..+-.+.-.....+.. +....=++ ++.-| -.|..-...++.++....+ +...++.+.+.+..+++
T Consensus 186 EGi~f~ssFa~~~~l~~~g~m-----~g~~~~i~-~I~RDE~~H~~~~~~l~~~l~~e~p~~~~~~~~~~v~~~~~eave 259 (346)
T 2rcc_A 186 EGLNFYSGFAFFYNLARNQKM-----VSTSTMIN-YINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAAD 259 (346)
T ss_dssp HHTTTHHHHHHHHHHHHTTSS-----HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCC-----HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999889999998774525-----25999999-998548899999999999987637324457789999999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999998
Q T0627 235 YMYLFLERCIQ 245 (261)
Q Consensus 235 ~e~~f~D~~y~ 245 (261)
.|..|.+.++.
T Consensus 260 ~E~~~~~~~~~ 270 (346)
T 2rcc_A 260 LEKDWFRYIIG 270 (346)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHCC
T ss_conf 99999999807
No 32
>2inp_A Phenol hydroxylase component PHN; DIIRON, four-helix bundle, regulatory protein, oxidoreductase; 2.30A {Pseudomonas stutzeri} PDB: 2inn_A
Probab=55.82 E-value=7.6 Score=16.26 Aligned_cols=181 Identities=9% Similarity=-0.036 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHC-CCC--HHHHHC
Q ss_conf 999999999899999999999999872788766899999999998664326799999----9999871-899--888720
Q T0627 52 QIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIRVELNHADYW----VNWCAAH-DVT--LEDLHD 124 (261)
Q Consensus 52 e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~l~----~~~~~~~-Gi~--~e~l~~ 124 (261)
+.++.++..--+.-..-....+.+..-++....+.-.. -+.-.|.+|.... ..+.+.. |.+ .+-..+
T Consensus 90 ~~lk~~l~~~~~~EygA~~~~a~~~r~a~s~~irn~~~------~qa~DElRH~Q~~~~~~~~~~k~~~g~~~~~~~w~~ 163 (494)
T 2inp_A 90 NALKLFISGISPLEHAAFQGYSKVGRQFSGAGARVACQ------MQAIDELRHSQTQQHAMSHYNKHFNGLHDGPHMHDR 163 (494)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHCSSHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHTTSSSCTTHHHHHTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf 99999971214899999999999987578879999999------998899999999999999861125500367887344
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH
Q ss_conf 457778999999999974278899999999999850158999-9998766542035776656889999962485356899
Q T0627 125 QRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWS-AVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPW 203 (261)
Q Consensus 125 ~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~ 203 (261)
.+...+.+.+++-++ ++++.+.+.|+..++|....... ..+... .. ...|......+..=.+...+|..
T Consensus 164 ~p~~q~~R~~~E~~l----taDw~E~~valnlvfE~~ftnLlfv~l~~~---Aa---~nGD~~t~tl~~SiqsDe~RH~~ 233 (494)
T 2inp_A 164 VWYLSVPKSFFDDAR----SAGPFEFLTAISFSFEYVLTNLLFVPFMSG---AA---YNGDMATVTFGFSAQSDEARHMT 233 (494)
T ss_dssp SGGGHHHHHHHHHHH----HSCHHHHHHHHTTCCCCCSHHHHHHHHHHH---HH---TTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH---HCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 806787799999865----146899999998877864368999999999---99---87896689999999999999999
Q ss_pred HHHHHHHHHHHCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999975379998--99999999999999999999999988752
Q T0627 204 EALEIICTLVGNKPSLQ--LQAELRQAVTKSYDYMYLFLERCIQLDKV 249 (261)
Q Consensus 204 e~~~~i~~~~~~~~~~~--~~~~~~~~~~~s~~~e~~f~D~~y~~e~~ 249 (261)
....+|..+++.+++.. .|.-+-..|-++-++. .+.-.++.+-..
T Consensus 234 ~g~~~lk~lle~~~~N~~~lQ~wld~wfWr~~r~~-~l~g~~mDY~~p 280 (494)
T 2inp_A 234 LGLEVIKFILEQHEDNVPIVQRWIDKWFWRGFRLL-SLVSMMMDYMLP 280 (494)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTCS
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCC
T ss_conf 99999999986580107999999999989999999-988877651688
No 33
>1dvk_A PRP18; PRE-mRNA splicing factor, X-RAY crystallography, RNA binding protein; 2.15A {Saccharomyces cerevisiae} SCOP: a.72.1.1
Probab=49.12 E-value=9.7 Score=15.59 Aligned_cols=42 Identities=19% Similarity=0.277 Sum_probs=16.6
Q ss_pred HHHHHHHCCCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 4789985689998999999------99989999999999999987278
Q T0627 39 ELYQQMRDAKLSPQIMRQY------LIGGWPVVEQFAVYMAKNLTKTR 80 (261)
Q Consensus 39 PF~~~l~~G~L~~e~f~~y------l~Qdy~yl~~f~r~la~~~~~~~ 80 (261)
|.++.|..++|+.+.+..- +.|+-.|+++.-.|+-++++++|
T Consensus 67 PL~~~L~~~~l~~dil~~L~~Iv~~~~q~r~y~~And~Yl~LaIGNa~ 114 (173)
T 1dvk_A 67 PLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAVQSYMKLSIGNVA 114 (173)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHTSGGGHHHHHHHHHHHHHTBCC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
T ss_conf 999999868999999999999999998540089999999998723788
No 34
>2rqp_A Heterochromatin protein 1-binding protein 3; histone H1, alternative splicing, chromosomal protein, DNA-binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=43.92 E-value=12 Score=15.08 Aligned_cols=43 Identities=26% Similarity=0.414 Sum_probs=34.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 8877767762689999999999999987184789985689998999999999899
Q T0627 9 GPLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWP 63 (261)
Q Consensus 9 g~~~~~~~~p~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~~yl~Qdy~ 63 (261)
||.+...+||.+++-+.+.+..+-+ ..| -+......|+.+.|.
T Consensus 1 gp~~~~~~~P~y~~MI~eAI~al~e-----------r~G-sS~~AI~kyI~~~y~ 43 (88)
T 2rqp_A 1 GPGMASSPRPKMDAILTEAIKACFQ-----------KSG-ASVVAIRKYIIHKYP 43 (88)
T ss_dssp CCSSSCCCCCCHHHHHHHHHHHHHH-----------HTC-CCHHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCC-----------CCC-CCHHHHHHHHHHHCC
T ss_conf 9998899998989999999998499-----------999-699999999998868
No 35
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein structure initiative; 1.40A {Rhodopseudomonas palustris CGA009} SCOP: a.25.1.4
Probab=36.48 E-value=15 Score=14.35 Aligned_cols=85 Identities=8% Similarity=-0.013 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCH
Q ss_conf 98999999999899999999999999872788766899999999998664326799999999987189988872045777
Q T0627 50 SPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAP 129 (261)
Q Consensus 50 ~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~~p~p 129 (261)
..+.|...|..-|.--+.+.+.+...+.++.+++.+. .+...+.+.+.|.+-..+.++.+|.++. ..+++
T Consensus 13 l~dlfi~~L~d~y~aE~q~~~al~~m~~~a~~peLk~------~l~~H~~eT~~qi~rLe~if~~lg~~~~----~~~c~ 82 (173)
T 2gyq_A 13 MEDLLLHGLRDIYYAEQQITKALPKMIEQATNRDLSQ------GLTSHLEETQKQIERLDQVFKKLGQKPS----GVNCP 82 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHH------HHHHHHHHHHHHHHHHHHHHHHHTCCSC----SCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH------HHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCH
T ss_conf 9999999999999999999999999998858999999------9999999999999999999998398987----68668
Q ss_pred HHHHHHHHHHHHHCC
Q ss_conf 899999999997427
Q T0627 130 ELHALSHWCWQTSSS 144 (261)
Q Consensus 130 ~t~ay~~~l~~~a~~ 144 (261)
+...+++-.-.+...
T Consensus 83 ~m~gli~e~~~~~~~ 97 (173)
T 2gyq_A 83 AIDGLIKEADETAGE 97 (173)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999850
No 36
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=29.26 E-value=20 Score=13.60 Aligned_cols=154 Identities=13% Similarity=0.023 Sum_probs=85.8
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH----HCCCCCHHHHHHHHHHHHHHCCC-CHHH
Q ss_conf 987278876689999999999866432679999999998718998887----20457778999999999974278-8999
Q T0627 75 NLTKTRFGRHPGEDMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDL----HDQRVAPELHALSHWCWQTSSSD-SLAV 149 (261)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l----~~~~p~p~t~ay~~~l~~~a~~~-~~~~ 149 (261)
.....+.++.+..+ .....+|.-|.+.|...++.+|.++++. ....-.|.......++...-... ++..
T Consensus 109 ~~~~~~~pE~~~~~------~~q~~~E~iHs~sYs~ile~l~~d~~e~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 182 (311)
T 2o1z_A 109 FLRQVKITEAKKFY------AFQIAVENIHSETYSLLIDNYIKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNSFAE 182 (311)
T ss_dssp HHHHCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHTTSHHHHHHHHHHHHHSSTTSCHHH
T ss_pred HHCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 61238919999999------999999999999999999985356888889999985238999999998630233177999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 99999999850158999999876654203577665688999996248535689999999999975379998999999999
Q T0627 150 AMAATNYAIEGATGEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAV 229 (261)
Q Consensus 150 ~laA~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~~~~~~~~~~~~ 229 (261)
.+.+. .+.|++.-..+-.+.-.....+.. ..-....+|+. .++--|..-...++..+... .++ +.+.+.+
T Consensus 183 ~lv~~-~~lEGi~F~s~Fa~~~~l~~~~~m--~g~~~~i~~I~---RDE~lH~~f~~~l~~~l~~e-~~~---e~v~~~~ 252 (311)
T 2o1z_A 183 RIVAN-ACVEGILFSGSFCAIFWFKKQNKL--HGLTFSNELIS---RDEGLHTDFNCLIYSLLENK-LPE---EVVQNIV 252 (311)
T ss_dssp HHHHH-HHHHHTTTHHHHHHHHHHHHTTCC--HHHHHHHHHHH---HHHHHHHHHHHHHHHTCSSC-CCH---HHHHHHH
T ss_pred HHHHH-HHHHHHHHHCCHHHHHHHHHCCHH--HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHC-CCH---HHHHHHH
T ss_conf 99999-999889884229999998754810--66999999998---11989999999999998632-999---9999999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q T0627 230 TKSYDYMYLFLERCI 244 (261)
Q Consensus 230 ~~s~~~e~~f~D~~y 244 (261)
+.++++|..|.+.+.
T Consensus 253 ~eavelE~~~~~~~~ 267 (311)
T 2o1z_A 253 KEAVEVERSFICESL 267 (311)
T ss_dssp HHHHHHHHTTBTTTB
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999876
No 37
>3fme_A Dual specificity mitogen-activated protein kinase kinase 6; active mutant, structural genomics consortium, SCG, SGC, acetylation; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=28.02 E-value=17 Score=13.99 Aligned_cols=17 Identities=6% Similarity=0.089 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHCCCC
Q ss_conf 99999999999753799
Q T0627 202 PWEALEIICTLVGNKPS 218 (261)
Q Consensus 202 ~~e~~~~i~~~~~~~~~ 218 (261)
..+..+++...+..+|+
T Consensus 240 s~~~~~ll~~~l~~dP~ 256 (290)
T 3fme_A 240 SAEFVDFTSQCLKKNSK 256 (290)
T ss_dssp CHHHHHHHHHHTCSSGG
T ss_pred CHHHHHHHHHHCCCCHH
T ss_conf 99999999997668976
No 38
>1ezf_A Farnesyl-diphosphate farnesyltransferase; isoprenoid synthase fold, all alpha-helix; HET: IN0; 2.15A {Homo sapiens} SCOP: a.128.1.2
Probab=27.60 E-value=21 Score=13.41 Aligned_cols=60 Identities=7% Similarity=-0.069 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 999999999986643267999--999999871899888720457778999999999974278
Q T0627 86 GEDMARRWLMRNIRVELNHAD--YWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSD 145 (261)
Q Consensus 86 ~~~~~~~~~~~~~~~e~~h~~--l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~ 145 (261)
+...+..+++.++.+...... +=.+.+...|++++++.+....|.....++.|...+...
T Consensus 178 G~AlQltNIlRDv~eD~~~gR~YlP~e~l~~~g~~~~dl~~~~~~~~~~~~~~~l~~~A~~h 239 (340)
T 1ezf_A 178 GLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHH 239 (340)
T ss_dssp HHHHHHHHHHHTHHHHHHHTCCCSCHHHHTTTCSSGGGGGSGGGHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCEECCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999769899579756869999885999999857768899999999999999999
No 39
>1r2f_A Protein (ribonucleotide reductase R2); nucleotide metabolism, oxidoreductase; 2.10A {Salmonella typhimurium} SCOP: a.25.1.2 PDB: 2bq1_I* 2r2f_A
Probab=25.55 E-value=23 Score=13.18 Aligned_cols=212 Identities=11% Similarity=-0.061 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCHH---HHHHHCCCCCHHHHHHHHHHHHHHHHHHH----HHHH-HHHHHCCCHHHHHHHHH
Q ss_conf 6899999999999999871847---89985689998999999999899999999----9999-99872788766899999
Q T0627 19 AWAQQLINDCSPAKARVVEHEL---YQQMRDAKLSPQIMRQYLIGGWPVVEQFA----VYMA-KNLTKTRFGRHPGEDMA 90 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF---~~~l~~G~L~~e~f~~yl~Qdy~yl~~f~----r~la-~~~~~~~~~~~~~~~~~ 90 (261)
.|...|++......=.-.+.|+ ++.+. +|+++. +.++..-.-++...- +.++ .+....+.++.+..+.
T Consensus 17 ~~~~~ly~k~~~~fW~p~Ei~l~~D~~d~~--~l~~~e-r~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~pE~~~~~~- 92 (319)
T 1r2f_A 17 DKDLEVWNRLTSNFWLPEKVPLSNDIPAWQ--TLSAAE-QQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLS- 92 (319)
T ss_dssp HHHHHHHHHHHHTCCCGGGSCGGGGHHHHH--TSCHHH-HHHHHHHHHHHHHHHHHHHHTHHHHHHTTCSSHHHHHHHH-
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--HCCHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH-
T ss_conf 889999999996799964638375499886--399999-9999999999999999997464999977659899999999-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH---HHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999986643267999999999871899888---7204577789999999999742788999999999998501589999
Q T0627 91 RRWLMRNIRVELNHADYWVNWCAAHDVTLED---LHDQRVAPELHALSHWCWQTSSSDSLAVAMAATNYAIEGATGEWSA 167 (261)
Q Consensus 91 ~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~---l~~~~p~p~t~ay~~~l~~~a~~~~~~~~laA~~~~~E~~~~~~~~ 167 (261)
...-+|..|.+.|...++.++.+.+. .....-.|..+....++........+...+.+. .+.|++.-..+=
T Consensus 93 -----~q~~~E~iHs~sYs~il~~l~~~~e~~~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~i~~-~~lEGi~F~s~F 166 (319)
T 1r2f_A 93 -----NISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEPLKKKIAS-VFLESFLFYSGF 166 (319)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHSSCHHHHHHHH-HHHHHTTTHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHH
T ss_conf -----99999999999999999986013668999998614489999999999862420489999999-998799998879
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998766542035776656889999962485356899999999999753799---98999999999999999999999999
Q T0627 168 VVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPS---LQLQAELRQAVTKSYDYMYLFLERCI 244 (261)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~~~---~~~~~~~~~~~~~s~~~e~~f~D~~y 244 (261)
.+.-..+..+.. ..-....+|+. ..+--|..-...++..+....+. +.-...+.+.++.++++|..|-+.++
T Consensus 167 ~~~~~~~~~g~m--~g~~~~i~~I~---RDE~lH~~f~~~l~~~~~~e~~~~~~~~~~~~~~e~~~eav~~E~~~~~~l~ 241 (319)
T 1r2f_A 167 WLPMYFSSRGKL--TNTADLIRLII---RDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALY 241 (319)
T ss_dssp HHHHHHHHTTSS--HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCC--CCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998765878--44899999999---8898999999999999998544888878999999999999999999999874
Q ss_pred H
Q ss_conf 8
Q T0627 245 Q 245 (261)
Q Consensus 245 ~ 245 (261)
.
T Consensus 242 ~ 242 (319)
T 1r2f_A 242 A 242 (319)
T ss_dssp T
T ss_pred H
T ss_conf 3
No 40
>2gol_A Matrix protein P17 (MA); viral maturation, immature, GAG, HIV-1, viral protein; 2.20A {Human immunodeficiency virus 1} SCOP: a.61.1.1 PDB: 1hiw_A 2hmx_A 2h3f_A 2h3i_A* 2h3q_A* 2h3v_A* 2h3z_A* 1uph_A* 2nv3_A* 2jmg_A* 1tam_A
Probab=24.45 E-value=24 Score=13.05 Aligned_cols=53 Identities=11% Similarity=-0.021 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHH
Q ss_conf 79999999998718998887204577789999999999742788----999999999998
Q T0627 103 NHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDS----LAVAMAATNYAI 158 (261)
Q Consensus 103 ~h~~l~~~~~~~~Gi~~e~l~~~~p~p~t~ay~~~l~~~a~~~~----~~~~laA~~~~~ 158 (261)
.|..|--+-++.++++|.-++. ..+|+..+.-+.-.-.+|+ .+...+|++||.
T Consensus 33 KHlVWAsrELeRFalnp~LLeT---~EGC~qIl~qLqP~l~TGSE~LkSLfNtvavLyCV 89 (133)
T 2gol_A 33 KHIVWASRELERFAVNPGLLET---SEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCV 89 (133)
T ss_dssp HHHHHHHHHHHHTTBCGGGGGS---HHHHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHH---HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 6675676788877069311124---88999999985634554628888887637986212
No 41
>3hiu_A Uncharacterized protein; APC40011, XCC3681, xanthomonas campestris PV. campestris STR. ATCC 33913, structural genomics, PSI-2; HET: MSE; 1.85A {Xanthomonas campestris PV}
Probab=23.53 E-value=25 Score=12.94 Aligned_cols=67 Identities=6% Similarity=0.047 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 98999999999899999999999999872788-76689999999999866432679999999998718998887
Q T0627 50 SPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRF-GRHPGEDMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDL 122 (261)
Q Consensus 50 ~~e~f~~yl~Qdy~yl~~f~r~la~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l 122 (261)
.++.|.-+|..-|.--+...+.|...+.++.+ ++.+. .+...+.+.+.|.+-..+-+..+|.++..+
T Consensus 3 ~re~~id~LrD~y~aE~Q~~~aL~~~~~~a~~~peLk~------al~~Hl~eT~~qi~rLe~if~~lg~~ps~~ 70 (166)
T 3hiu_A 3 SRERLVKWLQDAYAMEKEAETMMAAMASRIEHYPELKR------RIEQHVEETQQQSAGVQRCLELLNGSIPTA 70 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH------HHHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 78899999989999999999999999988538999999------999999999999999999999839994533
No 42
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=22.33 E-value=16 Score=14.22 Aligned_cols=34 Identities=3% Similarity=0.003 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHH
Q ss_conf 6899999999999999871847899856899989999
Q T0627 19 AWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMR 55 (261)
Q Consensus 19 ~~s~~L~~~~~~~w~~~~~HPF~~~l~~G~L~~e~f~ 55 (261)
+||+.+++++.=-++++.. -|-+ ..|+||+++|.
T Consensus 22 e~s~~cLe~~~Wd~~~A~~-~F~~--~~~~IP~eAF~ 55 (57)
T 2jp7_A 22 EYTFMLAEQSNWNYEVAIK-GFQS--SMNGIPREAFV 55 (57)
T ss_dssp HHHHHHHHHTTTCSHHHHH-HHHH--STTTSCHHHHT
T ss_pred HHHHHHHHHCCCCHHHHHH-HHHH--HHCCCCHHHHC
T ss_conf 9999999985989999999-9999--77579989845
No 43
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=22.01 E-value=27 Score=12.75 Aligned_cols=49 Identities=8% Similarity=-0.131 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 9999999999872788766899999999998664326799999999987189988
Q T0627 66 EQFAVYMAKNLTKTRFGRHPGEDMARRWLMRNIRVELNHADYWVNWCAAHDVTLE 120 (261)
Q Consensus 66 ~~f~r~la~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e 120 (261)
..-..++..++.++++++.+..|. ....+|..|...+.+..+.+|.++.
T Consensus 33 ~~a~~~Y~~~a~~~~~~~~k~~f~------~la~eE~~H~~~l~~~~~~l~~~~~ 81 (175)
T 2fzf_A 33 IGAREFYKSLAEKIKIEALKEKIN------WLAEEEKKHEALLRKLYSQMFPGKE 81 (175)
T ss_dssp HHHHHHHHHHHHSCCCTTHHHHHH------HHHHHTHHHHHHHHHHHHHHSTTCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999998779978999999------9999999999999999987289966
No 44
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 1yfd_A 1piy_A 1r65_A 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A 1av8_A 1pfr_A ...
Probab=20.17 E-value=29 Score=12.50 Aligned_cols=215 Identities=11% Similarity=0.007 Sum_probs=100.4
Q ss_pred CCCHHHHHHHHHHH-HHHHHHHHCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHCCCHHHHHHH
Q ss_conf 76268999999999-99999871847899856-899989999999998999999999-----999998727887668999
Q T0627 16 SYPAWAQQLINDCS-PAKARVVEHELYQQMRD-AKLSPQIMRQYLIGGWPVVEQFAV-----YMAKNLTKTRFGRHPGED 88 (261)
Q Consensus 16 ~~p~~s~~L~~~~~-~~w~~~~~HPF~~~l~~-G~L~~e~f~~yl~Qdy~yl~~f~r-----~la~~~~~~~~~~~~~~~ 88 (261)
-||. .-.|++... --| .-.+.||-+++.+ -+|+.+. +.++..-.-++...=. .........+.++.+..
T Consensus 32 ky~~-~~~ly~~~~~~fW-~peEi~ls~D~~dw~~Lt~~E-r~~~~~~la~f~~~D~~v~~~~~~~~~~~~~~pE~~~~- 107 (375)
T 1mxr_A 32 KYDI-FEKLIEKQLSFFW-RPEEVDVSRDRIDYQALPEHE-KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETW- 107 (375)
T ss_dssp SCHH-HHHHHHHHHHTCC-CGGGSCCTTHHHHHHTSCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTGGGBCSHHHHHH-
T ss_pred CCHH-HHHHHHHHHHCCC-CCCCCCCHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH-
T ss_conf 5679-9999999986789-950227243189997799999-99999999999999999976629988423797799999-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC-CCCHHHHHHHHHHHH-------HHC-----------------
Q ss_conf 9999999866432679999999998718998887204-577789999999999-------742-----------------
Q T0627 89 MARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQ-RVAPELHALSHWCWQ-------TSS----------------- 143 (261)
Q Consensus 89 ~~~~~~~~~~~~e~~h~~l~~~~~~~~Gi~~e~l~~~-~p~p~t~ay~~~l~~-------~a~----------------- 143 (261)
+.....+|.-|.+.|...++.++.++++..+. .-.|..+.-..++.. ...
T Consensus 108 -----~~~q~~~E~iH~~sYs~il~tl~~d~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
T 1mxr_A 108 -----VETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 182 (375)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHCHHHHHHHTTHHHHHHHHHHHHHHHHHHCSEEEEETTEEE
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf -----999999999899999999998736828899999606988999999999866776667899861667543345433
Q ss_pred -------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf -------7889999999999985015899999987665420357766568899999624853568999999999997537
Q T0627 144 -------SDSLAVAMAATNYAIEGATGEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNK 216 (261)
Q Consensus 144 -------~~~~~~~laA~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~h~~~D~~h~~e~~~~i~~~~~~~ 216 (261)
...+...+++.+ +.|++.-..+-...-..+..+.. ..--...+|+. ..+-.|+.-+..++..+....
T Consensus 183 ~~~~~~~~~~~~~~lv~~~-~lEGi~f~s~Fa~~~~l~~~g~m--~g~~~~i~~I~---RDE~~H~~f~~~l~~~l~~~~ 256 (375)
T 1mxr_A 183 TVSLRELKKKLYLCLMSVN-ALEAIRFYVSFACSFAFAERELM--EGNAKIIRLIA---RDEALHLTGTQHMLNLLRSGA 256 (375)
T ss_dssp EECHHHHHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHTTCC--HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCC
T ss_conf 3230478999999999999-99899984308999987643868--54899999998---539999999999999998427
Q ss_pred CCH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999-------89999999999999999999999998
Q T0627 217 PSL-------QLQAELRQAVTKSYDYMYLFLERCIQ 245 (261)
Q Consensus 217 ~~~-------~~~~~~~~~~~~s~~~e~~f~D~~y~ 245 (261)
+.+ +.++++.+.++.++++|..|.+.++.
T Consensus 257 ~~~~~~~~~~e~~~~i~~~~~eav~~E~~~~~~~~~ 292 (375)
T 1mxr_A 257 DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFR 292 (375)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 963588988999999999999999999999999845
No 45
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=20.04 E-value=27 Score=12.74 Aligned_cols=17 Identities=0% Similarity=-0.078 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHCCCC
Q ss_conf 99999999999753799
Q T0627 202 PWEALEIICTLVGNKPS 218 (261)
Q Consensus 202 ~~e~~~~i~~~~~~~~~ 218 (261)
+.+..+++..++..+|+
T Consensus 257 s~~~~~li~~~L~~dp~ 273 (318)
T 2dyl_A 257 SGDFQSFVKDCLTKDHR 273 (318)
T ss_dssp CHHHHHHHHHHTCSCTT
T ss_pred CHHHHHHHHHHCCCCHH
T ss_conf 99999999998648976
Done!