Query T0628 APC38818, Klebsiella pneumoniae, 295 residues
Match_columns 295
No_of_seqs 116 out of 235
Neff 5.7
Searched_HMMs 22458
Date Thu Jul 22 14:59:36 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0628.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0628.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g25_A Glycerol kinase; IDP007 97.2 0.00058 2.6E-08 43.8 5.6 69 222-290 377-449 (501)
2 3l0q_A Xylulose kinase; xlylul 95.8 0.011 4.8E-07 35.7 4.8 66 225-290 419-487 (554)
3 3ifr_A Carbohydrate kinase, FG 95.3 0.032 1.4E-06 32.6 6.0 69 222-290 374-445 (508)
4 2zf5_O Glycerol kinase; hypert 95.2 0.031 1.4E-06 32.7 5.6 67 223-290 369-438 (497)
5 3ll3_A Gluconate kinase; xylul 95.1 0.027 1.2E-06 33.1 5.1 70 221-290 366-438 (504)
6 2gup_A ROK family protein; sug 94.9 0.072 3.2E-06 30.3 6.6 144 1-166 1-151 (292)
7 2qm1_A Glucokinase; alpha-beta 94.6 0.073 3.2E-06 30.3 6.1 154 1-166 1-167 (326)
8 3hz6_A Xylulokinase; xylulose, 94.5 0.12 5.4E-06 28.9 7.2 65 224-290 380-448 (511)
9 3h3n_X Glycerol kinase; ATP-bi 94.4 0.073 3.2E-06 30.3 5.7 70 221-290 375-448 (506)
10 3jvp_A Ribulokinase; PSI-II, N 94.4 0.021 9.5E-07 33.7 3.0 69 222-290 413-485 (572)
11 2dpn_A Glycerol kinase; thermu 93.9 0.071 3.2E-06 30.4 4.9 70 221-290 370-443 (495)
12 2p3r_A Glycerol kinase; glycer 93.8 0.15 6.5E-06 28.3 6.4 70 221-290 373-446 (510)
13 2d4w_A Glycerol kinase; alpha 93.5 0.17 7.7E-06 27.9 6.3 69 222-290 376-448 (504)
14 2w40_A Glycerol kinase, putati 93.2 0.097 4.3E-06 29.5 4.6 69 222-290 379-452 (503)
15 3i8b_A Xylulose kinase; strain 92.6 0.24 1.1E-05 27.0 5.9 68 223-290 399-469 (515)
16 2itm_A Xylulose kinase, xylulo 92.4 0.36 1.6E-05 25.8 6.6 68 222-289 360-431 (484)
17 3h6e_A Carbohydrate kinase, FG 92.4 0.19 8.3E-06 27.7 5.1 44 244-287 385-430 (482)
18 1zc6_A Probable N-acetylglucos 91.3 0.23 1E-05 27.1 4.6 50 4-56 9-59 (305)
19 2ap1_A Putative regulator prot 89.9 0.45 2E-05 25.2 5.1 148 2-169 23-182 (327)
20 2uyt_A Rhamnulokinase; rhamnos 89.9 0.13 5.8E-06 28.7 2.3 64 222-286 366-433 (489)
21 2ch5_A NAGK protein; transfera 89.3 0.38 1.7E-05 25.7 4.3 34 2-35 2-36 (347)
22 2e2o_A Hexokinase; acetate and 82.1 2.3 0.0001 20.7 5.3 124 7-158 3-131 (299)
23 3bex_A Type III pantothenate k 75.2 3 0.00013 19.9 4.2 230 4-291 1-247 (249)
24 3eo3_A Bifunctional UDP-N-acet 74.1 3.1 0.00014 19.8 4.1 137 6-166 20-180 (333)
25 3mcp_A Glucokinase; structural 74.1 3.9 0.00017 19.2 11.1 237 4-256 7-268 (366)
26 3lm2_A Putative kinase; struct 72.9 2.8 0.00013 20.1 3.6 209 6-291 6-220 (226)
27 1woq_A Inorganic polyphosphate 72.6 3.8 0.00017 19.2 4.2 56 2-58 8-66 (267)
28 2yhx_A Hexokinase B; transfera 69.4 5 0.00022 18.5 4.5 18 7-24 62-79 (457)
29 3h1q_A Ethanolamine utilizatio 66.9 5.6 0.00025 18.1 20.3 222 5-286 27-268 (272)
30 3d2f_A Heat shock protein homo 65.0 3.1 0.00014 19.8 2.5 43 248-290 336-380 (675)
31 2aa4_A Mannac kinase, putative 64.8 6.1 0.00027 17.9 5.2 145 7-168 2-156 (289)
32 1jce_A ROD shape-determining p 63.9 2.8 0.00012 20.1 2.1 41 249-289 280-322 (344)
33 1sz2_A Glucokinase, glucose ki 61.4 7.1 0.00031 17.5 5.9 64 4-71 12-76 (332)
34 1vhx_A Putative holliday junct 58.0 8.1 0.00036 17.1 4.5 66 4-75 1-69 (150)
35 1dkg_D Molecular chaperone DNA 57.3 4 0.00018 19.1 1.9 47 248-295 335-383 (383)
36 2v7y_A Chaperone protein DNAK; 57.1 5.5 0.00025 18.2 2.6 40 248-287 304-345 (509)
37 2kho_A Heat shock protein 70; 56.2 4.8 0.00021 18.6 2.2 41 247-287 334-376 (605)
38 3i33_A Heat shock-related 70 k 55.8 4.8 0.00022 18.6 2.1 46 248-294 353-401 (404)
39 1ig8_A Hexokinase PII, hexokin 55.8 6.2 0.00028 17.9 2.7 62 6-67 80-156 (486)
40 1zbs_A Hypothetical protein PG 49.5 11 0.00049 16.3 9.0 123 8-158 2-134 (291)
41 1bdg_A Hexokinase; phosphotran 48.4 11 0.00051 16.1 4.4 18 7-24 69-86 (451)
42 2dwc_A PH0318, 433AA long hypo 47.2 12 0.00053 16.0 3.4 19 88-106 145-163 (433)
43 3hm8_A Hexokinase-3; glucose, 46.6 12 0.00054 16.0 3.1 25 7-31 60-86 (445)
44 1yuw_A Heat shock cognate 71 k 46.1 11 0.00049 16.3 2.7 44 247-290 331-377 (554)
45 1z05_A Transcriptional regulat 45.4 13 0.00057 15.9 5.2 143 6-166 108-267 (429)
46 3f9m_A Glucokinase; hexokinase 42.2 9.8 0.00043 16.6 1.9 18 7-24 78-95 (470)
47 1cza_N Hexokinase type I; stru 41.3 15 0.00065 15.5 3.6 17 7-23 527-543 (917)
48 3epq_A Putative fructokinase; 40.5 15 0.00067 15.4 6.5 135 8-160 5-150 (302)
49 2zgy_A Plasmid segregation pro 39.0 15 0.00068 15.4 2.5 43 246-290 272-319 (320)
50 1zxo_A Conserved hypothetical 37.9 15 0.00068 15.3 2.4 127 9-158 3-132 (291)
51 1f0y_A HCDH, L-3-hydroxyacyl-C 31.5 21 0.00093 14.5 6.5 17 220-237 245-261 (302)
52 2vns_A Metalloreductase steap3 31.3 21 0.00094 14.4 3.9 29 247-275 162-191 (215)
53 3hwr_A 2-dehydropantoate 2-red 29.7 22 0.001 14.3 4.7 18 154-171 161-178 (318)
54 3aap_A Ectonucleoside triphosp 28.4 24 0.0011 14.1 3.9 126 7-149 3-156 (353)
55 2raf_A Putative dinucleotide-b 25.9 26 0.0012 13.8 4.1 27 60-86 41-67 (209)
56 1e4f_T Cell division protein F 25.3 27 0.0012 13.8 1.9 28 249-276 331-359 (419)
57 1nu0_A Hypothetical protein YQ 24.5 28 0.0012 13.7 5.1 66 4-75 1-67 (138)
58 3k5i_A Phosphoribosyl-aminoimi 24.0 28 0.0013 13.6 3.1 33 75-107 135-168 (403)
59 3fh1_A Uncharacterized NTF2-li 23.5 28 0.0013 13.6 1.7 18 147-164 112-129 (129)
No 1
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, structural genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=97.16 E-value=0.00058 Score=43.85 Aligned_cols=69 Identities=13% Similarity=0.083 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHC-CCCCEEEEECCHHHHHHHHHHH-HHCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 788999999999999--99999731-7996389984858999999999-980984343387999999999999
Q T0628 222 EQVSEFLSGLLIGAE--VATLSDTF-AGQQAISLVAGSSLTSRYQQAF-AAIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 222 ~~~~~~LsGlLIG~E--laa~~~~~-~~~~~v~LiG~~~L~~~Y~~AL-~~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
+-.++.+.|+-...- +..+.+.. ..-+.|.+.|...-.+++.+.+ +.+|.++...+..+++..|-..++
T Consensus 377 ~l~rAvlEgia~~~r~~~e~l~~~~g~~~~~i~~~GG~s~s~~~~Qi~Adv~g~pV~~~~~~ea~alGaA~la 449 (501)
T 3g25_A 377 HFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLA 449 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
T ss_conf 9999999999999999999999862999887999897123899999999997986895798847899999999
No 2
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.76 E-value=0.011 Score=35.66 Aligned_cols=66 Identities=15% Similarity=0.167 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHH--HHHHHHCCCCCEEEEECCHHHHHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 9999999999999--999973179963899848589999999999-80984343387999999999999
Q T0628 225 SEFLSGLLIGAEV--ATLSDTFAGQQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 225 ~~~LsGlLIG~El--aa~~~~~~~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
++-+.|+....-. ..++..-..-+.|.+.|...-+++..+.++ .+|.++.+.+..+++.-|-..+|
T Consensus 419 ra~lEgia~~~~~~~~~~~~~g~~~~~i~~~GG~s~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA 487 (554)
T 3l0q_A 419 LATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLGSAMMG 487 (554)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEESCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
T ss_conf 999999999999999999962989787999895234899999999987992596788747999999999
No 3
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural genomics, transferase, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum atcc 11170}
Probab=95.35 E-value=0.032 Score=32.61 Aligned_cols=69 Identities=19% Similarity=0.186 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHCCCCCEEEEECCHHHHHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 788999999999999--9999973179963899848589999999999-80984343387999999999999
Q T0628 222 EQVSEFLSGLLIGAE--VATLSDTFAGQQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 222 ~~~~~~LsGlLIG~E--laa~~~~~~~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
+-.++.+.|+....- +..++..-...+.|.+.|...-+++..+.++ .+|.++...+..+++..|-..++
T Consensus 374 ~l~ravlEgia~~~~~~~~~~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~~~~e~~a~GaA~lA 445 (508)
T 3ifr_A 374 HLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVWMGIMADVLQRPVQLLANPLGSAVGAAWVA 445 (508)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEECCSTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
T ss_conf 999999999999889999999971999777999893300799999999998983897687728999999999
No 4
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, glycerol metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis KOD1}
Probab=95.24 E-value=0.031 Score=32.73 Aligned_cols=67 Identities=10% Similarity=0.070 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHCCCCCEEEEECCHHHHHHHHHHH-HHCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 889999999999999--99997317996389984858999999999-980984343387999999999999
Q T0628 223 QVSEFLSGLLIGAEV--ATLSDTFAGQQAISLVAGSSLTSRYQQAF-AAIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 223 ~~~~~LsGlLIG~El--aa~~~~~~~~~~v~LiG~~~L~~~Y~~AL-~~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
-.++.+-|+....-. ..++. ...-+.|.++|...-.++..+.+ +.+|.++...+..+++..|-..++
T Consensus 369 l~rav~Egia~~~~~~~~~l~~-~~~~~~i~~~GG~s~s~~~~Qi~Adv~g~pV~~~~~~ea~a~GaA~la 438 (497)
T 2zf5_O 369 LARATLEAIAYLTRDVVDEMEK-LVQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLA 438 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-TSCCCCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEECCCHHCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
T ss_conf 9999999999999999999971-799887999897322689999999997994797788737999999999
No 5
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.13 E-value=0.027 Score=33.08 Aligned_cols=70 Identities=13% Similarity=0.095 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHH-H-HHHHHHCCCCCEEEEECCHHHHHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 8788999999999999-9-999973179963899848589999999999-80984343387999999999999
Q T0628 221 REQVSEFLSGLLIGAE-V-ATLSDTFAGQQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 221 ~~~~~~~LsGlLIG~E-l-aa~~~~~~~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
.+..++.+-|+.-..- + ..++........|.+.|...-.++..+.++ .+|.++...+..+++..|-..++
T Consensus 366 ~~~~rAvlEgia~~~~~~~~~l~~~~~~~~~I~v~GG~s~n~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~la 438 (504)
T 3ll3_A 366 PEMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTMKEQQSGTLAAMFLA 438 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
T ss_conf 9999999999999889999999973899758999895224699999999988990796788746999999999
No 6
>2gup_A ROK family protein; sugar kinase, APC80695, sucrose, structural genomics, PSI, protein structure initiative; HET: SUC; 2.01A {Streptococcus pneumoniae TIGR4} SCOP: c.55.1.10 c.55.1.10
Probab=94.86 E-value=0.072 Score=30.33 Aligned_cols=144 Identities=19% Similarity=0.141 Sum_probs=78.5
Q ss_pred CCCCCCCEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCEE---EECCCCCCCCC
Q ss_conf 9766754478862763146766407-8441200121002215875648999999986217898189---97551551246
Q T0628 1 SNAMTARYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWRDGATPVV---MAGMVGSNVGW 76 (295)
Q Consensus 1 ~~~m~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~~~~PVi---~~GMigS~~Gw 76 (295)
||+|. .++||+|-||+|+=++|. ++++++.+-+ .++.++..+..+........+--| +.|++-...|-
T Consensus 1 ~~~m~--i~~iDiGGT~i~~al~d~~g~ii~~~~~~------t~~~~~~~~~~i~~~l~~~~i~~Igia~pG~vd~~~g~ 72 (292)
T 2gup_A 1 SNAMT--IATIDIGGTGIKFASLTPDGKILDKTSIS------TPENLEDLLAWLDQRLSEQDYSGIAMSVPGAVNQETGV 72 (292)
T ss_dssp ---CC--EEEEEEETTEEEEEEECTTCCEEEEEEEC------CCSSHHHHHHHHHHHHTTSCCSEEEEEESSEECTTTCB
T ss_pred CCCCE--EEEEEECHHHEEEEEECCCCCEEEEEEEE------CCCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCC
T ss_conf 99888--99999771147999991999799999971------88779999999999865536765994338616465575
Q ss_pred CC-CCCCCCC--CCHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEECC
Q ss_conf 23-7854578--89788635420479866883541007888876522269999998723889789844887216886288
Q T0628 77 KI-APYLPLP--AAFSDIGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMPGTHCKWVLADRR 153 (295)
Q Consensus 77 ~E-apy~~~P--a~l~~l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLPGTHsKWv~v~~g 153 (295)
+. .|+++-= ..+.++.. ..+.||++.--.. .-. -|| ++.....++.+++..||-.--..+-+|
T Consensus 73 i~~~~~~~~~~~~~~~~~~~---~~~~pv~i~NDa~------a~a-~ae----~~~~~~~~~~~~v~~g~GvG~gi~~~g 138 (292)
T 2gup_A 73 IDGFSAVPYIHGFSWYEALS---SYQLPVHLENDAN------CVG-LSE----LLAHPELENAACVVIGTGIGGAMIING 138 (292)
T ss_dssp EESCCSSGGGSSSBHHHHTG---GGCCCEEEEEHHH------HHH-HHH----HHHCTTCSSEEEEEESSSEEEEEEETT
T ss_pred CCCCCCCCCCCCCCHHHHHH---HCCCCEEEECHHH------HHH-HHH----HHCCCCCEEEEEEEECCCCCCCCCCCC
T ss_conf 33432333346876899998---5099499933267------987-666----540664002558997465223310134
Q ss_pred EEEEEECCCHHHH
Q ss_conf 6888630201899
Q T0628 154 QIHDFRTVLTGEL 166 (295)
Q Consensus 154 ~I~~f~T~mTGEL 166 (295)
++..=.....||+
T Consensus 139 ~~~~G~~~~age~ 151 (292)
T 2gup_A 139 RLHRGRHGLGGEF 151 (292)
T ss_dssp EEECCTTSCTTCG
T ss_pred CEEECCCCCCCCC
T ss_conf 0330688766421
No 7
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis V583}
Probab=94.57 E-value=0.073 Score=30.31 Aligned_cols=154 Identities=20% Similarity=0.167 Sum_probs=73.6
Q ss_pred CCCCCCCEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHC----CCCCCEEEE-----CCC
Q ss_conf 9766754478862763146766407-844120012100221587564899999998621----789818997-----551
Q T0628 1 SNAMTARYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWR----DGATPVVMA-----GMV 70 (295)
Q Consensus 1 ~~~m~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~----~~~~PVi~~-----GMi 70 (295)
||+|+.+.|+||-|-|++|+-++|. ++++.+.+-+...... ...+-..+.+.+.+.. .....|+.. |-+
T Consensus 1 ~~~m~~~vlgiD~GGT~~~~~l~d~~G~i~~~~~~~~~~~~~-~~~~~~~i~~~i~~~l~~~~~~~~~i~~igv~~~G~v 79 (326)
T 2qm1_A 1 SNAMDKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILED-GKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSV 79 (326)
T ss_dssp CCGGGCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCTTT-TTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEE
T ss_pred CCCCCCEEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCC-HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEE
T ss_conf 997798599999871108999991999799999983798889-8999999999999999971566556113761578257
Q ss_pred CCCCCC-CCCCCCCCC--CCHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEE
Q ss_conf 551246-237854578--89788635420479866883541007888876522269999998723889789844887216
Q T0628 71 GSNVGW-KIAPYLPLP--AAFSDIGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMPGTHCKW 147 (295)
Q Consensus 71 gS~~Gw-~Eapy~~~P--a~l~~l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLPGTHsKW 147 (295)
....|- ...|.+..- ..+.+.-.. ..+.+|++.-..... -.||. .+|.-......+++..||.---
T Consensus 80 d~~~g~~~~~~~l~~~~~~~l~~~l~~--~~~~~v~v~ND~~a~-------a~~e~--~~g~~~~~~~~~~~~~gtGig~ 148 (326)
T 2qm1_A 80 DIEKGTVVGAYNLNWTTVQPVKEQIES--ALGIPFALDNDANVA-------ALGER--WKGAGENNPDVIFITLGTGVGG 148 (326)
T ss_dssp ETTTTEEECBGGGTBCSCBCHHHHHHH--HHCSCEEEEEHHHHH-------HHHHH--HHSTTTTCSCEEEEEESSSEEE
T ss_pred ECCCCEEEECCCCCCCCCCHHHHHHHH--HHCCCEEEECHHHHH-------HHHHH--HHCCCCCCCCEEEEECCCCCEE
T ss_conf 567785862123550003538999999--879988992638899-------99999--8277778873568725886489
Q ss_pred EEEECCEEEEEECCCHHHH
Q ss_conf 8862886888630201899
Q T0628 148 VLADRRQIHDFRTVLTGEL 166 (295)
Q Consensus 148 v~v~~g~I~~f~T~mTGEL 166 (295)
..+.+|++..=.....||+
T Consensus 149 ~~~~~g~~~~g~~~~~~e~ 167 (326)
T 2qm1_A 149 GIVAAGKLLHGVAGCAGEV 167 (326)
T ss_dssp EEEETTEECCCSSSCTTCG
T ss_pred EEEECCCCCCCCCCCCCEE
T ss_conf 9998981267888876400
No 8
>3hz6_A Xylulokinase; xylulose, structural genomic, manolate, transferase, structural genomics, PSI-2, protein structure initiative; HET: ADP XUL; 1.65A {Chromobacterium violaceum}
Probab=94.55 E-value=0.12 Score=28.87 Aligned_cols=65 Identities=11% Similarity=0.180 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHC--CCCCEEEEECCHHHHHHHHHHHH-HCCCCEEEC-CHHHHHHHHHHHHH
Q ss_conf 899999999999999999731--79963899848589999999999-809843433-87999999999999
Q T0628 224 VSEFLSGLLIGAEVATLSDTF--AGQQAISLVAGSSLTSRYQQAFA-AIGREVSAV-AGDTAFQTGIRSIA 290 (295)
Q Consensus 224 ~~~~LsGlLIG~Elaa~~~~~--~~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~-d~d~a~~~Gl~~ia 290 (295)
.++-|-|+....- ...... .+-+.|.++|...-..+..+.++ ..|.++... +.++++..|-..++
T Consensus 380 ~rAilEgia~~~~--~~~e~l~~~~~~~i~v~GG~akn~~~~Qi~Adv~~~~v~~~~~~~e~~a~GaA~la 448 (511)
T 3hz6_A 380 LLAVLEGAALSLR--WCAELLGMEKVGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALA 448 (511)
T ss_dssp HHHHHHHHHHHHH--HHHHHHTGGGCCEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHCCCCCEEEEECCHHHCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH
T ss_conf 9999999999999--99999607998879998255548999999999868985876888726999999999
No 9
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleotide-binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.38 E-value=0.073 Score=30.31 Aligned_cols=70 Identities=13% Similarity=0.073 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHH-CCCCCEEEEECCHHHHHHHHHHH-HHCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 87889999999999999--999973-17996389984858999999999-980984343387999999999999
Q T0628 221 REQVSEFLSGLLIGAEV--ATLSDT-FAGQQAISLVAGSSLTSRYQQAF-AAIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 221 ~~~~~~~LsGlLIG~El--aa~~~~-~~~~~~v~LiG~~~L~~~Y~~AL-~~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
.+-.++-+-|+....-. ..+... -..-+.|.+.|...-.++..+.+ +.+|.++...+..+++..|-..+|
T Consensus 375 ~~~~rAvlEgia~~~~~~~~~~~~~~g~~~~~i~v~GG~aks~~~~Qi~Adv~g~pV~~~~~~ea~a~GaA~lA 448 (506)
T 3h3n_X 375 EDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLA 448 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEESGGGGCHHHHHHHHHHHTSEEEECSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
T ss_conf 89999999999987545788888861999777999878424799999999997990595698857899999999
No 10
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans}
Probab=94.35 E-value=0.021 Score=33.74 Aligned_cols=69 Identities=17% Similarity=0.199 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHCCCCCEEEEECC-HHHHHHHHHHH-HHCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 788999999999999--9999973179963899848-58999999999-980984343387999999999999
Q T0628 222 EQVSEFLSGLLIGAE--VATLSDTFAGQQAISLVAG-SSLTSRYQQAF-AAIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 222 ~~~~~~LsGlLIG~E--laa~~~~~~~~~~v~LiG~-~~L~~~Y~~AL-~~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
+-.++-+-|+....- +..++........+.++|. +.-.++..+.+ +.+|.++.+.+..+++..|-..+|
T Consensus 413 ~~~rAvlEgia~~~~~~~e~l~~~~~~~~~i~~~GGg~~~n~~~~Qi~Advlg~pV~~~~~~e~~alGAA~lA 485 (572)
T 3jvp_A 413 EIYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVAASKQTPALGAAMFA 485 (572)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEBCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
T ss_conf 9999999999999999999999618997569996486200889999999988991795788752899999999
No 11
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=93.90 E-value=0.071 Score=30.36 Aligned_cols=70 Identities=10% Similarity=0.099 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHCC-CCCEEEEECCHHHHHHHHHHH-HHCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 87889999999999999--99997317-996389984858999999999-980984343387999999999999
Q T0628 221 REQVSEFLSGLLIGAEV--ATLSDTFA-GQQAISLVAGSSLTSRYQQAF-AAIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 221 ~~~~~~~LsGlLIG~El--aa~~~~~~-~~~~v~LiG~~~L~~~Y~~AL-~~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
.+-.++.+-|+.-..-. ..+..... .-++|.+.|...-..+..+.+ +.+|.++...+..+++..|-..++
T Consensus 370 ~~l~rai~Egia~~~~~~l~~~~~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pv~~~~~~e~~a~GaA~lA 443 (495)
T 2dpn_A 370 AHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMA 443 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
T ss_conf 99999999999999998765443303898667999781121799999999997992596688747999999999
No 12
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} SCOP: c.55.1.4 c.55.1.4 PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=93.85 E-value=0.15 Score=28.35 Aligned_cols=70 Identities=11% Similarity=0.087 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHC-CCCCEEEEECCHHHHHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 878899999999999999--999731-79963899848589999999999-80984343387999999999999
Q T0628 221 REQVSEFLSGLLIGAEVA--TLSDTF-AGQQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 221 ~~~~~~~LsGlLIG~Ela--a~~~~~-~~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
.+-.++-+-|+..+.... .++... ..-++|.+.|...-.++..+.++ .+|.++...+..+++..|-..++
T Consensus 373 ~~~~ra~lEgia~~~~~~~~~~~~~~g~~~~~i~~~GG~s~s~~~~Qi~Adv~g~pV~~~~~~e~~a~GaA~lA 446 (510)
T 2p3r_A 373 NHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLA 446 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
T ss_conf 89999999968999999999999864999787999783344899999999987992595798856999999999
No 13
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=93.53 E-value=0.17 Score=27.89 Aligned_cols=69 Identities=12% Similarity=0.044 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHCC-CCCEEEEECCHHHHHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 78899999999999999--9997317-9963899848589999999999-80984343387999999999999
Q T0628 222 EQVSEFLSGLLIGAEVA--TLSDTFA-GQQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 222 ~~~~~~LsGlLIG~Ela--a~~~~~~-~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
.-.++.+-|+....-.. .+..... .-++|.+.|...-.++..+.++ .+|.++...+..+++..|-..+|
T Consensus 376 ~~~ra~~Egia~~~~~~~~~l~~~~g~~~~~i~~~GG~sks~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA 448 (504)
T 2d4w_A 376 HIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAA 448 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
T ss_conf 9999988788999999999999863989787999895443699999999998990596798857999999999
No 14
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=93.21 E-value=0.097 Score=29.49 Aligned_cols=69 Identities=13% Similarity=0.167 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHCC--CCCEEEEECCHHHHHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 7889999999999999--99997317--9963899848589999999999-80984343387999999999999
Q T0628 222 EQVSEFLSGLLIGAEV--ATLSDTFA--GQQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 222 ~~~~~~LsGlLIG~El--aa~~~~~~--~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
+-.++.+-|+....-. ..++.... ..+.+.+.|...-.++..+.++ .+|.++...+..+++..|-..+|
T Consensus 379 ~l~rAilEgia~~~~~~~~~l~~~~g~~~~~~i~~~GGgsks~l~~Qi~Advlg~pV~~~~~~e~~alGaA~lA 452 (503)
T 2w40_A 379 HIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLA 452 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
T ss_conf 99999999999999999999999729897628999576320999999999988990794798866999999999
No 15
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=92.56 E-value=0.24 Score=26.96 Aligned_cols=68 Identities=21% Similarity=0.241 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHCCCCCEEEEECCHHHHHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHH
Q ss_conf 889999999999999--999973179963899848589999999999-80984343387999999999999
Q T0628 223 QVSEFLSGLLIGAEV--ATLSDTFAGQQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 223 ~~~~~LsGlLIG~El--aa~~~~~~~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~Gl~~ia 290 (295)
-.++-|-|+....-. ..++..-..-+.|.++|...-.+++.+.++ .+|.++.+.+..+.+..|-..+|
T Consensus 399 l~rA~lEgia~~~~~~~e~l~~~g~~~~~i~~~GG~s~s~~~~Qi~Adv~g~pV~~~~~~e~~a~GaA~lA 469 (515)
T 3i8b_A 399 LARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVAIGAARQA 469 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
T ss_conf 99999999999999999999970979787999895120889999999987994696788858999999999
No 16
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=92.40 E-value=0.36 Score=25.85 Aligned_cols=68 Identities=18% Similarity=0.262 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHCCCCCEEEEECCHHHHHHHHHHHH-HCCCCEEEC-CHHHHHHHHHHHH
Q ss_conf 7889999999999999--999973179963899848589999999999-809843433-8799999999999
Q T0628 222 EQVSEFLSGLLIGAEV--ATLSDTFAGQQAISLVAGSSLTSRYQQAFA-AIGREVSAV-AGDTAFQTGIRSI 289 (295)
Q Consensus 222 ~~~~~~LsGlLIG~El--aa~~~~~~~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~-d~d~a~~~Gl~~i 289 (295)
+-.++-+-|+....-. ..++..-..-+.|.++|...-.++..+.++ .+|.++... +.++++..|-..+
T Consensus 360 ~l~rAi~Egia~~~~~~~~~l~~~g~~~~~i~~~GG~s~s~~~~Qi~Adv~g~pV~~~~~~~~~~a~GaA~l 431 (484)
T 2itm_A 360 ELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
T ss_conf 999999988899999999999971998766999778502899999999987991585488745899999999
No 17
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain DSM 12444, SGX, transferase, structural genomics; 2.50A {Novosphingobium aromaticivorans DSM12444}
Probab=92.36 E-value=0.19 Score=27.69 Aligned_cols=44 Identities=11% Similarity=0.074 Sum_probs=31.7
Q ss_pred CCCCCEEEEECCHHHHHHHHHHHHH-C-CCCEEECCHHHHHHHHHH
Q ss_conf 1799638998485899999999998-0-984343387999999999
Q T0628 244 FAGQQAISLVAGSSLTSRYQQAFAA-I-GREVSAVAGDTAFQTGIR 287 (295)
Q Consensus 244 ~~~~~~v~LiG~~~L~~~Y~~AL~~-~-G~~~~~~d~d~a~~~Gl~ 287 (295)
.....+|.+.|...-.++..+.++- + |.++...+..+.+..|-.
T Consensus 385 ~~~~~~i~~~GG~s~s~~~~QilAdv~~~~~V~~~~~~e~ta~GAA 430 (482)
T 3h6e_A 385 IGSTGRILVEGRFAEADVFVRALASLRPDCAVYTANAHNDVSFGAL 430 (482)
T ss_dssp TTCCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEESSCCCTTGGGH
T ss_pred HCCCCEEEEECCCHHCHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
T ss_conf 2799869998886218999999998729987990797637999999
No 18
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, structural genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum atcc 12472} SCOP: c.55.1.5 c.55.1.5
Probab=91.29 E-value=0.23 Score=27.05 Aligned_cols=50 Identities=18% Similarity=0.119 Sum_probs=32.7
Q ss_pred CCCCEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHH
Q ss_conf 6754478862763146766407-8441200121002215875648999999986
Q T0628 4 MTARYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQH 56 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~ 56 (295)
|-.++|+||-|.|++|+-++|. ++++++.+.+... ...+++.++..++..
T Consensus 9 ~m~y~lGIDiGgT~~~~~l~d~~G~il~~~~~~~~~---~~~~~~~~~~~i~~~ 59 (305)
T 1zc6_A 9 SIRYLIGVDGGGTGTRIRLHASDGTPLAMAEGGASA---LSQGIAKSWQAVLST 59 (305)
T ss_dssp CCCEEEEEEECSSCEEEEEEETTCCEEEEEEESCCC---GGGCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCC---CCCCHHHHHHHHHHH
T ss_conf 887899999282218999998999899999956998---566999999999999
No 19
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein structure initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=89.95 E-value=0.45 Score=25.19 Aligned_cols=148 Identities=18% Similarity=0.201 Sum_probs=77.0
Q ss_pred CCCCCCEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHH---HHHHHCC--C-C--CCEEEECCCCC
Q ss_conf 766754478862763146766407-844120012100221587564899999---9986217--8-9--81899755155
Q T0628 2 NAMTARYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAE---ITQHWRD--G-A--TPVVMAGMVGS 72 (295)
Q Consensus 2 ~~m~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~---~~~~~~~--~-~--~PVi~~GMigS 72 (295)
|+| ||+||-|-|++|+-++|. ++++.+.+.+ ++...++..+.. .+.+... . . +-|-+.|.+-+
T Consensus 23 ~~~---yiGiDiGGT~i~~al~d~~g~i~~~~~~~-----t~~~~~~~~l~~i~~~i~~~~~~~~~~~~igi~~~g~vd~ 94 (327)
T 2ap1_A 23 NAM---YYGFDIGGTKIALGVFDSTRRLQWEKRVP-----TPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPET 94 (327)
T ss_dssp CCE---EEEEEECSSEEEEEEEETTCCEEEEEEEE-----CCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCC
T ss_pred CCE---EEEEEECCCEEEEEEEECCCCEEEEEEEE-----CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf 985---99999364669999990999899999997-----9999999999999999999888639972799996785433
Q ss_pred CCCCCCCCCCCCC--CCHH-HHHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEE
Q ss_conf 1246237854578--8978-863542047986688354100788887652226999999872388978984488721688
Q T0628 73 NVGWKIAPYLPLP--AAFS-DIGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMPGTHCKWVL 149 (295)
Q Consensus 73 ~~Gw~Eapy~~~P--a~l~-~l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLPGTHsKWv~ 149 (295)
..|-...+...-- ..+. .|.. .++.++.+.-.+ +.|---| ..+|.....++.++..-|+.---..
T Consensus 95 ~~g~i~~~~~~~~~~~~~~~~L~~---~~~~pv~~~nd~--------~~~a~~e-~~~g~~~~~~~~~~i~ig~gig~~~ 162 (327)
T 2ap1_A 95 EDGTLYAANVPAASGKPLRADLSA---RLDRDVRLDNDA--------NCFALSE-AWDDEFTQYPLVMGLILGTGVGGGL 162 (327)
T ss_dssp TTSCCBCTTCTTTTTSCHHHHHHH---HHTSCEEEEEHH--------HHHHHHH-HTSTTGGGCSEEEEEEESSSEEEEE
T ss_pred CCCCCCCCCCCHHHCCCHHHHHHH---HHCCCCCCCCCC--------CEEHHHH-HHCCCCCCCCCCCEEEEECCCCCCE
T ss_conf 433345531101101425767766---534652234321--------2000010-1001244456412599703322311
Q ss_pred EECCEEEEEECCCHHHHHHH
Q ss_conf 62886888630201899999
Q T0628 150 ADRRQIHDFRTVLTGELHHL 169 (295)
Q Consensus 150 v~~g~I~~f~T~mTGELf~~ 169 (295)
+.+|++..=.....||+-+.
T Consensus 163 i~~g~l~~G~~g~ageigh~ 182 (327)
T 2ap1_A 163 VLNGKPITGQSYITGEFGHM 182 (327)
T ss_dssp EETTEEECCTTSCTTCGGGS
T ss_pred ECCCCCCCCCCCCCCEEEEE
T ss_conf 00332234678877636678
No 20
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinase-HSP70- actin superfamily, L-rhamnulose kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=89.92 E-value=0.13 Score=28.69 Aligned_cols=64 Identities=19% Similarity=0.131 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHH-CCCCCEEEEECCHHHHHHHHHHHH-HCCCCEEECCHHHHHHHHH
Q ss_conf 788999999999999--9999973-179963899848589999999999-8098434338799999999
Q T0628 222 EQVSEFLSGLLIGAE--VATLSDT-FAGQQAISLVAGSSLTSRYQQAFA-AIGREVSAVAGDTAFQTGI 286 (295)
Q Consensus 222 ~~~~~~LsGlLIG~E--laa~~~~-~~~~~~v~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~Gl 286 (295)
+-.++-+.|+..+.- +..++.. ...-++|.+.|...-..+..+.++ ..|.++...+.+. +..|-
T Consensus 366 ~l~rAvlEgiaf~~~~~~~~l~~~~g~~~~~i~~~GG~a~s~~w~Qi~Adv~g~~V~~~~~e~-sa~Ga 433 (489)
T 2uyt_A 366 ELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEA-STLGN 433 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEESGGGGCHHHHHHHHHHHTSEEEECCTTH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCHHHHHHHHHHHCCEEEECCCCH-HHHHH
T ss_conf 999999999999999999999986098978899988713468999999998899068578647-89999
No 21
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, ribonuclease H fold, sugar kinase/HSP70/actin superfamily, domain rotation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=89.27 E-value=0.38 Score=25.67 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=28.9
Q ss_pred CCCCCCEEEEECCCHHHEEEEECC-CCEEEECCCC
Q ss_conf 766754478862763146766407-8441200121
Q T0628 2 NAMTARYIAIDWGSTNLRAWLYQG-EECLESRQSE 35 (295)
Q Consensus 2 ~~m~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~ 35 (295)
+-|+..+|.||-|-|++|+-++|. ++++.+.+.+
T Consensus 2 ~~m~~~~iGIDiGGTk~~~~l~d~~G~il~~~~~~ 36 (347)
T 2ch5_A 2 QFMAAIYGGVEGGGTRSEVLLVSEDGKILAEADGL 36 (347)
T ss_dssp CSSSCEEEEEEECTTCEEEEEEETTSCEEEEEEEC
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEC
T ss_conf 76487899999061102889995999999999936
No 22
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuclease-H fold, sugar kinase, glucose, conformational change; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=82.14 E-value=2.3 Score=20.70 Aligned_cols=124 Identities=19% Similarity=0.161 Sum_probs=58.9
Q ss_pred CEEEEECCCHHHEEEEECC-CCEEEECCCCCCH-HHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 4478862763146766407-8441200121002-2158756489999999862178981899755155124623785457
Q T0628 7 RYIAIDWGSTNLRAWLYQG-EECLESRQSEAGV-TRLNGRSPAAVLAEITQHWRDGATPVVMAGMVGSNVGWKIAPYLPL 84 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv-~~~~~~~f~~~l~~~~~~~~~~~~PVi~~GMigS~~Gw~Eapy~~~ 84 (295)
.+|+||=|.|++|+=++|. ++++++.+.+... .....+..-+.+.+.+.........++.-|..+.
T Consensus 3 ~~lGIDiGgT~i~~~l~D~~g~il~~~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~------------ 70 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGEADVVGMGVAGL------------ 70 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSCCSEEEEEETTC------------
T ss_pred EEEEEEECHHHEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC------------
T ss_conf 99999956002899999599989999995799975213999999999999974689865578823676------------
Q ss_pred CCCHHHH--HHHH-HCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCEEEEE
Q ss_conf 8897886--3542-047986688354100788887652226999999872388978984488721688628868886
Q T0628 85 PAAFSDI--GQQL-TAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMPGTHCKWVLADRRQIHDF 158 (295)
Q Consensus 85 Pa~l~~l--~~~~-~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLPGTHsKWv~v~~g~I~~f 158 (295)
...... ...+ .....+|.+..- ... .+-......+.+.+-.|+..+........+...
T Consensus 71 -~~~~~~~~~~~l~~~~~~~v~i~nd--------------~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (299)
T 2e2o_A 71 -DSKFDWENFTPLASLIAPKVIIQHD--------------GVI-ALFAETLGEPGVVVIAGTGSVVEGYNGKEFLRV 131 (299)
T ss_dssp -CSHHHHHHHHHHHTTSSSEEEEEEH--------------HHH-HHHHHHTTSCEEEEEESSSEEEEEECSSCEEEE
T ss_pred -CCCCCHHHHHHHHHHCCCCEEEECH--------------HHH-HHHHHCCCCCCEEEECCCCCEEEEEECCEEEEE
T ss_conf -7741058999998512897899611--------------889-987412455513785067525789843517998
No 23
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=75.19 E-value=3 Score=19.90 Aligned_cols=230 Identities=12% Similarity=0.145 Sum_probs=107.4
Q ss_pred CCCCEEEEECCCHHHEEEEECCCCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 67544788627631467664078441200121002215875648999999986217898189975515512462378545
Q T0628 4 MTARYIAIDWGSTNLRAWLYQGEECLESRQSEAGVTRLNGRSPAAVLAEITQHWRDGATPVVMAGMVGSNVGWKIAPYLP 83 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~~~~PVi~~GMigS~~Gw~Eapy~~ 83 (295)
|++=++.||.|-|++...++++++++...+...+... ..+++...+..++.........+++|.-+
T Consensus 1 m~~M~L~iDiGNT~~k~~l~~~~~~~~~~~~~~~~~~-t~d~~~~~l~~~~~~~~~~i~~~~issVv------------- 66 (249)
T 3bex_A 1 MDPMYLLVDVGNTHSVFSITEDGKTFRRWRLSTGVFQ-TEDELFSHLHPLLGDAMREIKGIGVASVV------------- 66 (249)
T ss_dssp CCCEEEEEEECSSEEEEEEESSSSSCEEEEEECCTTC-CHHHHHHHHHHHHGGGGGGEEEEEEEESC-------------
T ss_pred CCCEEEEEEECCCCEEEEEEECCEEEEEEEECCCCCC-CHHHHHHHHHHHHHCCHHHCCEEEECCCC-------------
T ss_conf 9962999992777128999989999999995378767-88999999999850104433335331258-------------
Q ss_pred CCCC---HHHHHHHHHCCCCCEEEEC---CEECCCCCCCCCCCCHH--HHHHHHHHCCC-CCEEEECCCCCEEEEEECCE
Q ss_conf 7889---7886354204798668835---41007888876522269--99999872388-97898448872168862886
Q T0628 84 LPAA---FSDIGQQLTAVGDNIWIIP---GLCVSRDDNHNVMRGEE--TQLLGARALAP-SSVYVMPGTHCKWVLADRRQ 154 (295)
Q Consensus 84 ~Pa~---l~~l~~~~~~~~~~v~iiP---Gl~~~~~~~~DVMRGEE--tqi~G~l~~~~-~~~icLPGTHsKWv~v~~g~ 154 (295)
|.. +..+...... -.++++-+ |+++...+ |.-+ |-. ..++|+.+..+ +.+++=-||....=.|++|+
T Consensus 67 -p~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~y~~-p~~L-G~DR~~~~~aa~~~~~~~~lViD~GTA~Tid~v~~g~ 142 (249)
T 3bex_A 67 -PTQNTVIERFSQKYFH-ISPIWVKAKNGCVKWNVKN-PSEV-GADRVANVVAFVKEYGKNGIIIDMGTATTVDLVVNGS 142 (249)
T ss_dssp -HHHHHHHHHHHHHHHS-CCCEECCCCSSSSEECSSC-GGGS-CHHHHHHHHHHHHHTCSCEEEEEESSEEEEEEEETTE
T ss_pred -CHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCC-HHHC-CHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCE
T ss_conf -5689999999999559-9659994677875525678-4542-4889999999999709988999759804799882880
Q ss_pred EEEEECCC-HHHHHHHHHCCCEECCCCCCCCC------C-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 88863020-18999998608500234787657------9-8999999999740610588999999999842689878899
Q T0628 155 IHDFRTVL-TGELHHLLLQLSLVGAGLPPQET------S-AAAFAAGLQRGINNPAVLPQLFEVRASHVLGALPREQVSE 226 (295)
Q Consensus 155 I~~f~T~m-TGELf~~L~~~siL~~~~~~~~~------d-~~aF~~gv~~~~~~~~l~~~LF~~Ra~~L~~~~~~~~~~~ 226 (295)
..+=.=.. -+-++..|.++|-.=+..+.... + .++...|+-.+.-.
T Consensus 143 ~~GG~I~PG~~l~~~aL~~~Ta~Lp~v~~~~~~~~~g~~T~~ai~~G~~~g~~~-------------------------- 196 (249)
T 3bex_A 143 YEGGAILPGFFMMVHSLFRGTAKLPLVEVKPADFVVGKDTEENIRLGVVNGSVY-------------------------- 196 (249)
T ss_dssp EEEEEEEECHHHHHHHHHHTCSSCCCCCCCCCCSSSBSSHHHHHHHHHHHHHHH--------------------------
T ss_pred EEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--------------------------
T ss_conf 787687857999999999757528876667765678889899999999999999--------------------------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
Q ss_conf 99999999999999973179963899848589999999999809843433879999999999999
Q T0628 227 FLSGLLIGAEVATLSDTFAGQQAISLVAGSSLTSRYQQAFAAIGREVSAVAGDTAFQTGIRSIAY 291 (295)
Q Consensus 227 ~LsGlLIG~Elaa~~~~~~~~~~v~LiG~~~L~~~Y~~AL~~~G~~~~~~d~d~a~~~Gl~~ia~ 291 (295)
.+.|++ ...++.+. ..+|++-|.++ ......+. ...++ +..+++||+...+
T Consensus 197 ~i~~~i-----~~~~~~~~-~~~vilTGG~a--~~l~~~l~-----~~~~~-~~Lvl~GL~~~~~ 247 (249)
T 3bex_A 197 ALEGII-----GRIKEVYG-DLPVVLTGGQS--KIVKDMIK-----HEIFD-EDLTIKGVYHFCF 247 (249)
T ss_dssp HHHHHH-----HHHHHHHC-CCCEEEESTTS--GGGGGGSC-----CSEEC-TTHHHHHHHHHHH
T ss_pred HHHHHH-----HHHHHHCC-CCCEEEECCCH--HHHHHHCC-----CCEEC-CCCHHHHHHHHHC
T ss_conf 999999-----99999839-98099968988--99986468-----78787-6818999999862
No 24
>3eo3_A Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-acetylmannosamine kinase; non-protein kinase, sialic acid biosynthesis; 2.84A {Homo sapiens}
Probab=74.12 E-value=3.1 Score=19.79 Aligned_cols=137 Identities=15% Similarity=0.144 Sum_probs=67.0
Q ss_pred CCEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHH---H----HHHHHHCCCCCCEEEECC--CCC---
Q ss_conf 54478862763146766407-8441200121002215875648999---9----999862178981899755--155---
Q T0628 6 ARYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVL---A----EITQHWRDGATPVVMAGM--VGS--- 72 (295)
Q Consensus 6 ~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l---~----~~~~~~~~~~~PVi~~GM--igS--- 72 (295)
..-|+||.|-|++|+-++|. ++++.+.+... +..++..+ . +.+.+......+++..|. .|.
T Consensus 20 ~~~lGIDiGGT~~~~al~D~~G~vl~~~~~~~------~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigia~pG~vd~ 93 (333)
T 3eo3_A 20 LSALAVDLGGTNLRVAIVSMKGEIVKKYTQFN------PKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNP 93 (333)
T ss_dssp CEEEEEEECSSEEEEEEEETTSCEEEEEEEEC------CSSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEC------
T ss_pred EEEEEEEECCCEEEEEEECCCCCEEEEEEECC------CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
T ss_conf 02899997711199999949997999999689------998789999999999999998621368456898415643212
Q ss_pred CC-----------CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEC
Q ss_conf 12-----------4623785457889788635420479866883541007888876522269999998723889789844
Q T0628 73 NV-----------GWKIAPYLPLPAAFSDIGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMP 141 (295)
Q Consensus 73 ~~-----------Gw~Eapy~~~Pa~l~~l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLP 141 (295)
.. +|.+.|- .+.|... .+.||.+.-... -.-.+|. .+|......+.+++.-
T Consensus 94 ~~g~i~~~~~~~~~~~~~~l------~~~l~~~---~~~pv~~~Nd~~-------a~a~aE~--~~g~~~~~~~~~~i~~ 155 (333)
T 3eo3_A 94 REGIVLHSTKLIQEWNSVDL------RTPLSDT---LHLPVWVDNDGN-------CAALAER--KFGQGKGLENFVTLIT 155 (333)
T ss_dssp ------------------CC------HHHHHHH---HCSCEEEECHHH-------HHHHHHH--HTSTTTTCSSEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCH------HHHHHHH---CCCCEEEECCCC-------CHHHHHH--HHCCCCCCCCCEEEEE
T ss_conf 33100133334554323311------6777650---278667404432-------1238998--6186558875249996
Q ss_pred CCCCEEEEEECCEEEEEECCCHHHH
Q ss_conf 8872168862886888630201899
Q T0628 142 GTHCKWVLADRRQIHDFRTVLTGEL 166 (295)
Q Consensus 142 GTHsKWv~v~~g~I~~f~T~mTGEL 166 (295)
|+..-...+.+|++..=.....||+
T Consensus 156 g~Gig~~~~~~g~~~~G~~~~~ge~ 180 (333)
T 3eo3_A 156 GTGIGGGIIHQHELIHGSSFCAAEL 180 (333)
T ss_dssp SSSEEEEEEETTEECCCTTSCCCCG
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 3565343012233345786664425
No 25
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=74.12 E-value=3.9 Score=19.16 Aligned_cols=237 Identities=15% Similarity=0.055 Sum_probs=109.4
Q ss_pred CCCCEEEEECCCHHHEEEEECCC-CEEEECCCCCCHHHCCCCCHHHHHHHHHHHHC---C---CCCC---EEEECCCCCC
Q ss_conf 67544788627631467664078-44120012100221587564899999998621---7---8981---8997551551
Q T0628 4 MTARYIAIDWGSTNLRAWLYQGE-ECLESRQSEAGVTRLNGRSPAAVLAEITQHWR---D---GATP---VVMAGMVGSN 73 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~~-~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~---~---~~~P---Vi~~GMigS~ 73 (295)
.....|++|=|-||+|+-++|.+ +++++.+.+ ...+.++..+..++.... . ..+- |-+.|.+-++
T Consensus 7 d~~~vlgiDIGGT~i~~alvd~~g~i~~~~~~~-----t~~~~~~~~l~~l~~~i~~~~~~~~~~i~gIGIa~pG~vd~~ 81 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQGGKEIADPVVLP-----ACADCLDKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQ 81 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEETTEECSCCEEEE-----CCTTCHHHHHHHHHHHHHHHHTTCSSCCCEEEEECCSSEETT
T ss_pred CCCEEEEEEECCCEEEEEEEECCCCEEEEEEEC-----CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECC
T ss_conf 998899999872139999990998599999975-----898899999999999999998547998767999925657689
Q ss_pred CCCCC-CCCCC---CCCCHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHH----HHHHCCCCCEEEECCCCC
Q ss_conf 24623-78545---78897886354204798668835410078888765222699999----987238897898448872
Q T0628 74 VGWKI-APYLP---LPAAFSDIGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLL----GARALAPSSVYVMPGTHC 145 (295)
Q Consensus 74 ~Gw~E-apy~~---~Pa~l~~l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~----G~l~~~~~~~icLPGTHs 145 (295)
.|-+. .|.++ -...+.+.-.. ..+.||++.--....--+..-..+..+.... |.-....+.+++-.||--
T Consensus 82 ~G~i~~~~nl~~~~~~~~L~~~l~~--~~g~PV~i~NDa~a~AlaE~~~~~~~~~~~~~~~~G~~~~~~~~~~i~iGtGi 159 (366)
T 3mcp_A 82 AGIIGDLPNFPSFRGGVALGPFLED--IFGIPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTGF 159 (366)
T ss_dssp TTEECCCTTCGGGTTCBCHHHHHHH--HHCSCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSSE
T ss_pred CCEEEECCCCHHHHCCCCHHHHHHH--HHCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
T ss_conf 9989827863275459748999999--87988686173889999998743453221000034556675868999868885
Q ss_pred EEEEEECCEEEEEECCCHHHHHHHHHCCCEECCC---CCCCCCCHHHHHHHHHHHHHCC-CH-HHHHHHHHHHHHHCCCC
Q ss_conf 1688628868886302018999998608500234---7876579899999999974061-05-88999999999842689
Q T0628 146 KWVLADRRQIHDFRTVLTGELHHLLLQLSLVGAG---LPPQETSAAAFAAGLQRGINNP-AV-LPQLFEVRASHVLGALP 220 (295)
Q Consensus 146 KWv~v~~g~I~~f~T~mTGELf~~L~~~siL~~~---~~~~~~d~~aF~~gv~~~~~~~-~l-~~~LF~~Ra~~L~~~~~ 220 (295)
-=..+.+|++..=.....||+-+. ..... .-+......+..+-........ .. ...+|.+-.. ...-+
T Consensus 160 G~giv~~G~l~~G~~g~aGeiGh~-----~~~~~~~gclE~~~S~~ai~~~~~~~~~~~~~~~~~~i~~l~~~--a~~gd 232 (366)
T 3mcp_A 160 GAGVVIDGELLRGDNAAGGYVWCL-----RNKKYPEYIVEESVSIRAVMRVYAERSGDAGARTPKEIFEIAEG--IRPGN 232 (366)
T ss_dssp EEEEEETTEECCCTTSCTTCCTTS-----BCSSCTTSBGGGTSSHHHHHHHHHHHSSCCSCCCHHHHHHHHHT--SSCSC
T ss_pred EEEEEECCEEEECCCCCCCEEEEE-----ECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH--HHCCC
T ss_conf 699999999966787768368878-----43778998631211299999999985087557887789999999--87199
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHCCCCCEEEEECCH
Q ss_conf 87889--9999999999999999731799638998485
Q T0628 221 REQVS--EFLSGLLIGAEVATLSDTFAGQQAISLVAGS 256 (295)
Q Consensus 221 ~~~~~--~~LsGlLIG~Elaa~~~~~~~~~~v~LiG~~ 256 (295)
...+. -.-.+-.+|.-++.+-..+. +.|+|-|.=
T Consensus 233 ~~~a~~i~~~~~~~Lg~~la~l~~lld--~~IViGGgi 268 (366)
T 3mcp_A 233 REAAIAAFEELGEMAGDALASAITLID--GLIVIGGGL 268 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC--SEEEEESGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC--CEEEEECHH
T ss_conf 399999999999999999999999769--969995848
No 26
>3lm2_A Putative kinase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, transferase; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=72.91 E-value=2.8 Score=20.08 Aligned_cols=209 Identities=13% Similarity=0.096 Sum_probs=93.6
Q ss_pred CCEEEEECCCHHHEEEEECCC-CEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCC---EEEECCCCCCCCCCCCCC
Q ss_conf 544788627631467664078-4412001210022158756489999999862178981---899755155124623785
Q T0628 6 ARYIAIDWGSTNLRAWLYQGE-ECLESRQSEAGVTRLNGRSPAAVLAEITQHWRDGATP---VVMAGMVGSNVGWKIAPY 81 (295)
Q Consensus 6 ~~~IaiDwGTtnlR~~l~~~~-~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~~~~P---Vi~~GMigS~~Gw~Eapy 81 (295)
...|++|.|-|+.|.=++|.+ .++.+... ....+..+..+..-..+.... |=+.|.+-...+-...|.
T Consensus 6 ~~vlgvDiGGT~i~~~l~d~~~~~~~~t~~--------~~~~~~~~~~i~~~i~~~~~~~IgI~~PG~Vd~~~~i~~~~n 77 (226)
T 3lm2_A 6 QTVLAIDIGGSHVKIGLSTDGEERKVESGK--------TMTGPEMVAAVTAMAKDMTYDVIAMGYPGPVVHNKPLREPVN 77 (226)
T ss_dssp CCEEEEEECSSEEEEEETTTCCEEEEECCT--------TCCHHHHHHHHHHHTTTCCCSEEEEEESSCEETTEECSCCTT
T ss_pred CEEEEEEECCCEEEEEEEECCCCEEEEECC--------CCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEECCC
T ss_conf 989999978855999999699879997079--------999799999999999747998399995769958938997887
Q ss_pred CCCCCCHH--HHHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCEEEEEE
Q ss_conf 45788978--8635420479866883541007888876522269999998723889789844887216886288688863
Q T0628 82 LPLPAAFS--DIGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMPGTHCKWVLADRRQIHDFR 159 (295)
Q Consensus 82 ~~~Pa~l~--~l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLPGTHsKWv~v~~g~I~~f~ 159 (295)
+. | ... +|.+. ++.||++.-- -....+|-. ...+.++.-.||=--=..+.+|++..
T Consensus 78 l~-~-~w~~~~L~~~---lg~pV~v~ND--------------an~aalgE~-~~~~~~~i~~GtGiG~gi~~~G~l~a-- 135 (226)
T 3lm2_A 78 LG-E-GWVGYDYEGA---FGRPVRIVND--------------ALMQAIGSY-NGGRMLFLGLGTGLGAAMIVENVAQP-- 135 (226)
T ss_dssp SC-S-CCTTCCHHHH---HTSCEEEEEH--------------HHHHHHHHC-CSSEEEEEEESSSEEEEEEETTEEEE--
T ss_pred CC-C-CCCCCCHHHH---CCCCEEEECH--------------HHHHHHHHH-HCCCEEEEEECCEEEEEEEECCEEEC--
T ss_conf 78-5-3458786782---6985899248--------------988897661-25969999965348899998996911--
Q ss_pred CCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 02018999998608500234787657989999999997406105889999999998426898788999999999999999
Q T0628 160 TVLTGELHHLLLQLSLVGAGLPPQETSAAAFAAGLQRGINNPAVLPQLFEVRASHVLGALPREQVSEFLSGLLIGAEVAT 239 (295)
Q Consensus 160 T~mTGELf~~L~~~siL~~~~~~~~~d~~aF~~gv~~~~~~~~l~~~LF~~Ra~~L~~~~~~~~~~~~LsGlLIG~Elaa 239 (295)
||+- |-.... ..+-+.+..+ .. |.+. .-.+-..|| +.-++.
T Consensus 136 ----gE~G-----h~~~~~-----~~~~E~~~s~-------~~--------~~~~-----~~~~~~~~l-----~~~i~~ 176 (226)
T 3lm2_A 136 ----MEIA-----HLPYRK-----GKTYEHYVSE-------AY--------REKK-----GNAKWQKRV-----QDVVER 176 (226)
T ss_dssp ----ECCT-----TSEEET-----TEEHHHHTCH-------HH--------HHHH-----CHHHHHHHH-----HHHHHH
T ss_pred ----CCCC-----CEECCC-----CCCHHHHCCH-------HH--------HHHH-----HHHHHHHHH-----HHHHHH
T ss_conf ----5232-----225689-----9859998298-------99--------9983-----579999999-----999999
Q ss_pred HHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
Q ss_conf 9973179963899848589999999999809843433879999999999999
Q T0628 240 LSDTFAGQQAISLVAGSSLTSRYQQAFAAIGREVSAVAGDTAFQTGIRSIAY 291 (295)
Q Consensus 240 ~~~~~~~~~~v~LiG~~~L~~~Y~~AL~~~G~~~~~~d~d~a~~~Gl~~ia~ 291 (295)
+...+.++ ++++|.+-. +.++.+--.+++++.+.. +.|-.++|+
T Consensus 177 l~~~~dPe--~ivlGGGis-----~~~~~~~~~v~~~~n~a~-~~ga~~lw~ 220 (226)
T 3lm2_A 177 LSAALEPD--EVVIGGGNV-----ERLENLPPKCRRGDNAMA-FEGGFRLWK 220 (226)
T ss_dssp HHHHHCCS--EEEEESGGG-----GGCCCCCTTEEECCTTHH-HHHHHHHHH
T ss_pred HHHHHCCC--EEEEECHHH-----HCHHHHHHHHEECCCCHH-HHHHHHHHH
T ss_conf 99997989--899918377-----171242466578486278-898999720
No 27
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=72.57 E-value=3.8 Score=19.25 Aligned_cols=56 Identities=20% Similarity=0.179 Sum_probs=32.7
Q ss_pred CCCCCCEEEEECCCHHHEEEEECC-C-CEEEECC-CCCCHHHCCCCCHHHHHHHHHHHHC
Q ss_conf 766754478862763146766407-8-4412001-2100221587564899999998621
Q T0628 2 NAMTARYIAIDWGSTNLRAWLYQG-E-ECLESRQ-SEAGVTRLNGRSPAAVLAEITQHWR 58 (295)
Q Consensus 2 ~~m~~~~IaiDwGTtnlR~~l~~~-~-~vl~~~~-~~~Gv~~~~~~~f~~~l~~~~~~~~ 58 (295)
+...+..|+||-|-|+.|+=++|. + .++.++. -+. -..-.++.+...+...+.++.
T Consensus 8 ~~~~~~viGiDIGGT~i~~~lvd~~~~~i~~~~~~~~t-~~~~~~~~~~~~i~~~i~~l~ 66 (267)
T 1woq_A 8 SHKNAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPT-PQPATPESVAEAVALVVAELS 66 (267)
T ss_dssp ---CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEEEC-CSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEECCCEEEEEEEECCCCEEEEEEEEECC-CCCCCHHHHHHHHHHHHHHHH
T ss_conf 38999899999776559999998999989999999678-999999999999999999986
No 28
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=69.41 E-value=5 Score=18.48 Aligned_cols=18 Identities=28% Similarity=0.455 Sum_probs=16.4
Q ss_pred CEEEEECCCHHHEEEEEC
Q ss_conf 447886276314676640
Q T0628 7 RYIAIDWGSTNLRAWLYQ 24 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~ 24 (295)
.|+|+|-|-||||+-+++
T Consensus 62 ~fLAlDlGGTN~RV~~V~ 79 (457)
T 2yhx_A 62 SFLAIVMGGGDLEVILIS 79 (457)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEECCCCEEEEEEE
T ss_conf 999997178857999999
No 29
>3h1q_A Ethanolamine utilization protein EUTJ; structural genomics, PSI-2, protein structure initiative; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-2901}
Probab=66.86 E-value=5.6 Score=18.15 Aligned_cols=222 Identities=11% Similarity=0.091 Sum_probs=106.1
Q ss_pred CCCEEEEECCCHHHEEEEECC-CCEEEE-CCCCCCHHHCCCCCHHH---HHHHHHHHH---CCCCCC-EEEECCCCCCCC
Q ss_conf 754478862763146766407-844120-01210022158756489---999999862---178981-899755155124
Q T0628 5 TARYIAIDWGSTNLRAWLYQG-EECLES-RQSEAGVTRLNGRSPAA---VLAEITQHW---RDGATP-VVMAGMVGSNVG 75 (295)
Q Consensus 5 ~~~~IaiDwGTtnlR~~l~~~-~~vl~~-~~~~~Gv~~~~~~~f~~---~l~~~~~~~---~~~~~P-Vi~~GMigS~~G 75 (295)
.|.+|+||-||||.-++..+. +.++.. .....++.+=...+|+. .|..+...- ....++ ++
T Consensus 27 ~~~~vgIDlGTs~~~~~v~~~~~~~v~~~~~~~~~v~~Gvi~d~~~a~~~l~~l~~~ae~~~g~~i~~~v---------- 96 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQEGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELFQAA---------- 96 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECTTCCEEEEEEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSCCCEEE----------
T ss_pred CCCEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCC----------
T ss_conf 8867999889883999999999978987524355787887964899999999999988641355577600----------
Q ss_pred CCCCCCCCCCCCHHHHH-----HHHHCCCC-CEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCC-CEEEECCCCCEEE
Q ss_conf 62378545788978863-----54204798-66883541007888876522269999998723889-7898448872168
Q T0628 76 WKIAPYLPLPAAFSDIG-----QQLTAVGD-NIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPS-SVYVMPGTHCKWV 148 (295)
Q Consensus 76 w~Eapy~~~Pa~l~~l~-----~~~~~~~~-~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~-~~icLPGTHsKWv 148 (295)
+++|+...+.. .+....+. .+++|+ |...+.......+ .++-+=|.++.-.
T Consensus 97 ------itvP~~~~~~~r~a~~~aa~~AGl~~~~li~----------------Ep~AAA~~~~~~~~lvvDiGggttdvs 154 (272)
T 3h1q_A 97 ------TAIPPGTVGRNAEACGHVVAGAGLELVTLVD----------------EPVAAARALGINDGIVVDIGGGTTGIA 154 (272)
T ss_dssp ------EECCSCC---CTTHHHHHHHHTTCEEEEEEC----------------HHHHHHHHHTCSSEEEEEECSSCEEEE
T ss_pred ------EEECCCCCHHHHHHHHHHHHHCCHHHHHCCC----------------HHHHHHHHCCCCCEEEEEECCCCEEEE
T ss_conf ------5429978778899999999842322420100----------------566665431355327997125520101
Q ss_pred EEECCEEEEEECCCHH-HHHHH-HHCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 8628868886302018-99999-860850023478765798999999999740610588999999999842689878899
Q T0628 149 LADRRQIHDFRTVLTG-ELHHL-LLQLSLVGAGLPPQETSAAAFAAGLQRGINNPAVLPQLFEVRASHVLGALPREQVSE 226 (295)
Q Consensus 149 ~v~~g~I~~f~T~mTG-ELf~~-L~~~siL~~~~~~~~~d~~aF~~gv~~~~~~~~l~~~LF~~Ra~~L~~~~~~~~~~~ 226 (295)
.++.|++....+...| +-|.- |..+ |.... ...+.++.-+++.. .+ .-.....+.
T Consensus 155 vi~~g~i~~~~~~~~GG~~~d~~I~~~--l~~~~--------~~AE~iK~~ls~~~---e~-~~ii~~~~e--------- 211 (272)
T 3h1q_A 155 VIEKGKITATFDEPTGGTHLSLVLAGS--YKIPF--------EEAETIKKDFSRHR---EI-MRVVRPVIE--------- 211 (272)
T ss_dssp EEETTEEEEECCBSCCHHHHHHHHHHH--HTCCH--------HHHHHHHHSSTTHH---HH-HHHHHHHHH---------
T ss_pred EEECCCCEEEHHHHHHHHHHHHHHHHH--HHHHH--------HCCCCCCCCCCCCC---CC-CEECHHHHH---------
T ss_conf 231465111113243202579999998--56433--------20124443221234---31-002116677---------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH-HHCCCCEEEC-CHHHHHHHHH
Q ss_conf 9999999999999997317996389984858999999999-9809843433-8799999999
Q T0628 227 FLSGLLIGAEVATLSDTFAGQQAISLVAGSSLTSRYQQAF-AAIGREVSAV-AGDTAFQTGI 286 (295)
Q Consensus 227 ~LsGlLIG~Elaa~~~~~~~~~~v~LiG~~~L~~~Y~~AL-~~~G~~~~~~-d~d~a~~~Gl 286 (295)
. |-..+...........+|.|+|.+.+...-...+ +.+|.+++.. +.+.++-.|.
T Consensus 212 ~-----i~~~i~~~l~~~~~~~~IvL~GG~s~ip~l~~~l~~~~g~~v~~~~nP~~avA~Ga 268 (272)
T 3h1q_A 212 K-----MALIVKEVIKNYDQTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGI 268 (272)
T ss_dssp H-----HHHHHHHHTTTSCSSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHH
T ss_pred H-----HHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHEEECCE
T ss_conf 7-----89999999961799887999898053012999999997899753799314000141
No 30
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, acetylation, ATP-binding, calmodulin-binding, chaperone, cytoplasm; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=64.95 E-value=3.1 Score=19.79 Aligned_cols=43 Identities=19% Similarity=0.399 Sum_probs=32.3
Q ss_pred CEEEEECCHHHHHHHHHHHH-HCCCC-EEECCHHHHHHHHHHHHH
Q ss_conf 63899848589999999999-80984-343387999999999999
Q T0628 248 QAISLVAGSSLTSRYQQAFA-AIGRE-VSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 248 ~~v~LiG~~~L~~~Y~~AL~-~~G~~-~~~~d~d~a~~~Gl~~ia 290 (295)
+.|.|+|.+.....-+..|. .+|.+ .+..+.|+++-.|-.-.+
T Consensus 336 ~~V~LvGGssriP~v~~~l~~~fg~~i~~~~n~deaVA~GAa~~a 380 (675)
T 3d2f_A 336 DFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFIC 380 (675)
T ss_dssp CEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 089996990665659999999849998778997059999999999
No 31
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=64.82 E-value=6.1 Score=17.90 Aligned_cols=145 Identities=16% Similarity=0.074 Sum_probs=69.4
Q ss_pred CEEEEECCCHHHEEEEEC-CCCEEEECCCCCCHHHCCCCC-H---HHHHHHHHHHHCCCC--CCEEEECCCCCCCC-CCC
Q ss_conf 447886276314676640-784412001210022158756-4---899999998621789--81899755155124-623
Q T0628 7 RYIAIDWGSTNLRAWLYQ-GEECLESRQSEAGVTRLNGRS-P---AAVLAEITQHWRDGA--TPVVMAGMVGSNVG-WKI 78 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~-~~~vl~~~~~~~Gv~~~~~~~-f---~~~l~~~~~~~~~~~--~PVi~~GMigS~~G-w~E 78 (295)
..|+||=|-||+|+=++| .++++.+.+-+ ++... + ...+..++.+..... +-|-+.|.+-+..+ +..
T Consensus 2 ~~igiDiGGT~~~~~l~d~~G~ii~~~~~~-----~~~~~~~~~i~~~i~~~~~~~~~~~~~igia~~G~i~~~~~~~~~ 76 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELP-----TPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALN 76 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEE-----CCSSCCHHHHHHHHHHHHTTTGGGCSEEEEEESSEEETTEEECSS
T ss_pred CEEEEEECHHHEEEEEECCCCCEEEEEEEE-----CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEE
T ss_conf 799999881048999997999799999997-----898889999999999999998764374146544555410110010
Q ss_pred CCCCCC--CCCHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCEEE
Q ss_conf 785457--889788635420479866883541007888876522269999998723889789844887216886288688
Q T0628 79 APYLPL--PAAFSDIGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMPGTHCKWVLADRRQIH 156 (295)
Q Consensus 79 apy~~~--Pa~l~~l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLPGTHsKWv~v~~g~I~ 156 (295)
.++.+. ...+...-.. ..+.||++.--. +.+--.|.. .|- ....+.++..-|+-.-=..+.+|++.
T Consensus 77 ~~~~~~~~~~~l~~~l~~--~~~~pv~~~ND~--------~~~a~~e~~-~~~-~~~~~~~~~~~~~~~g~~~~~~g~~~ 144 (289)
T 2aa4_A 77 PHNLGGLLHFPLVKTLEQ--LTNLPTIAINDA--------QAAAWAEFQ-ALD-GDITDMVFITVSTGVGGGVVSGCKLL 144 (289)
T ss_dssp GGGGGGGTTCCHHHHHHH--HHCSCEEEEEHH--------HHHHHHHHH-TSC-TTCCCEEEEEESSSEEEEEEETTEEE
T ss_pred CCCCCCCCCCCHHHHHHH--HHCCCCCCCCHH--------HHHHHHHHH-HCC-CCCCEEEEEECCCCCCCEEEECCCEE
T ss_conf 135553345524555556--541451123015--------565541330-024-65425999952676664133101100
Q ss_pred EEECCCHHHHHH
Q ss_conf 863020189999
Q T0628 157 DFRTVLTGELHH 168 (295)
Q Consensus 157 ~f~T~mTGELf~ 168 (295)
.......||+=+
T Consensus 145 ~g~~g~~ge~g~ 156 (289)
T 2aa4_A 145 TGPGGLAGHIGH 156 (289)
T ss_dssp CCTTSCCCCGGG
T ss_pred ECCCCCCCCCCC
T ss_conf 013688775453
No 32
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A*
Probab=63.91 E-value=2.8 Score=20.09 Aligned_cols=41 Identities=24% Similarity=0.228 Sum_probs=30.6
Q ss_pred EEEEECCHHHHHHHHHHH-HHCCCCEEEC-CHHHHHHHHHHHH
Q ss_conf 389984858999999999-9809843433-8799999999999
Q T0628 249 AISLVAGSSLTSRYQQAF-AAIGREVSAV-AGDTAFQTGIRSI 289 (295)
Q Consensus 249 ~v~LiG~~~L~~~Y~~AL-~~~G~~~~~~-d~d~a~~~Gl~~i 289 (295)
.|.|+|.......-+..+ +.+|.++... +.|+++-.|-..+
T Consensus 280 ~ViLvGGsSriP~v~~~i~~~fg~~v~~~~npdeaVA~GAA~~ 322 (344)
T 1jce_A 280 GIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMV 322 (344)
T ss_dssp CEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHG
T ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 4999895341247999999997859776888665999999999
No 33
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=61.44 E-value=7.1 Score=17.51 Aligned_cols=64 Identities=17% Similarity=0.042 Sum_probs=39.7
Q ss_pred CCCCEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 6754478862763146766407-8441200121002215875648999999986217898189975515
Q T0628 4 MTARYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWRDGATPVVMAGMVG 71 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~~~~PVi~~GMig 71 (295)
-+.+.+++|=|-||+|+=++|. ++.+.+.+... ......+.+.+.+++.+... ...-+.-|++|
T Consensus 12 ~~~y~L~~DIGGT~ir~gl~d~~~~~i~~~~~~~---~~~~~~~~~~l~~~~~~~~~-~i~~igi~~pG 76 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIASGEISQAKTYS---GLDYPSLEAVIRVYLEEHKV-EVKDGCIAIAC 76 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETTTCCEEEEEEEE---GGGCSCHHHHHHHHHHHSCC-CCCEEEEEESS
T ss_pred CCCEEEEEEECCHHHHHEEEECCCCEEEEEEEEC---CCCHHHHHHHHHHHHHHCCC-CCCEEEEEEEC
T ss_conf 4338999997805432546989999896888878---99876899999999986699-87658999346
No 34
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=58.03 E-value=8.1 Score=17.13 Aligned_cols=66 Identities=17% Similarity=0.254 Sum_probs=39.4
Q ss_pred CCCCEEEEECCCHHHEEEEECCCCEEEECCCCCCHHH---CCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCC
Q ss_conf 6754478862763146766407844120012100221---58756489999999862178981899755155124
Q T0628 4 MTARYIAIDWGSTNLRAWLYQGEECLESRQSEAGVTR---LNGRSPAAVLAEITQHWRDGATPVVMAGMVGSNVG 75 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~~~vl~~~~~~~Gv~~---~~~~~f~~~l~~~~~~~~~~~~PVi~~GMigS~~G 75 (295)
|+=+++++|+|+-+.=+-.-|..+.++. +..+.. ...+..-..+..++.+|. ...++-|+.-...|
T Consensus 1 ~~MriLgiD~G~kriGvAisD~~~~~a~---pl~~i~~~~~~~~~~~~~i~~iv~e~~---i~~iViGlP~~~~g 69 (150)
T 1vhx_A 1 MSLRILGLDLGTKTLGVALSDEMGWTAQ---GIETIKINEAEGDYGLSRLSELIKDYT---IDKIVLGFPKNMNG 69 (150)
T ss_dssp -CEEEEEEEECSSEEEEEEECTTSSSEE---EEEEEECBGGGTBCCHHHHHHHHTTSE---EEEEEEECCCCBTT
T ss_pred CCCEEEEEEECCCEEEEEEECCCCCCCC---CEEEEEECCCCCHHHHHHHHHHHHHHC---CCEEEECCCCCCCC
T ss_conf 9843999992799899999738988435---604465034562268999999997634---36288516423477
No 35
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=57.27 E-value=4 Score=19.11 Aligned_cols=47 Identities=26% Similarity=0.325 Sum_probs=33.0
Q ss_pred CEEEEECCHHHHHHHHHHHH-HCCCCE-EECCHHHHHHHHHHHHHHHHCC
Q ss_conf 63899848589999999999-809843-4338799999999999999709
Q T0628 248 QAISLVAGSSLTSRYQQAFA-AIGREV-SAVAGDTAFQTGIRSIAYAVAN 295 (295)
Q Consensus 248 ~~v~LiG~~~L~~~Y~~AL~-~~G~~~-~~~d~d~a~~~Gl~~ia~a~~~ 295 (295)
+.|.|+|........+..++ .+|.++ +..+.++++-.|. ++.-|++|
T Consensus 335 ~~V~lvGG~s~~p~l~~~i~~~f~~~~~~~~~~~~aVa~GA-A~~aa~ls 383 (383)
T 1dkg_D 335 DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGA-AVQGGVLT 383 (383)
T ss_dssp CEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHH-HHHTTTTC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HHHHHHCC
T ss_conf 99999895024589999999986889766898064699989-99987269
No 36
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=57.13 E-value=5.5 Score=18.18 Aligned_cols=40 Identities=28% Similarity=0.404 Sum_probs=31.0
Q ss_pred CEEEEECCHHHHHHHHHHHH-HCCCC-EEECCHHHHHHHHHH
Q ss_conf 63899848589999999999-80984-343387999999999
Q T0628 248 QAISLVAGSSLTSRYQQAFA-AIGRE-VSAVAGDTAFQTGIR 287 (295)
Q Consensus 248 ~~v~LiG~~~L~~~Y~~AL~-~~G~~-~~~~d~d~a~~~Gl~ 287 (295)
+.|.|+|.......-+..|. .+|.. .+.++.|+++-.|-.
T Consensus 304 d~V~lvGGssriP~v~~~l~~~fg~~~~~~~npdeaVA~GAA 345 (509)
T 2v7y_A 304 DKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAA 345 (509)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 589998872577789999999868997778791038999999
No 37
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=56.21 E-value=4.8 Score=18.59 Aligned_cols=41 Identities=27% Similarity=0.324 Sum_probs=32.8
Q ss_pred CCEEEEECCHHHHHHHHHHHH-HCCCC-EEECCHHHHHHHHHH
Q ss_conf 963899848589999999999-80984-343387999999999
Q T0628 247 QQAISLVAGSSLTSRYQQAFA-AIGRE-VSAVAGDTAFQTGIR 287 (295)
Q Consensus 247 ~~~v~LiG~~~L~~~Y~~AL~-~~G~~-~~~~d~d~a~~~Gl~ 287 (295)
-+.|.|||.+.....-+..|+ .+|.+ ...+++|+++-.|-.
T Consensus 334 I~~V~LvGGssRiP~Vq~~l~~~fg~~~~~~~n~deava~GAA 376 (605)
T 2kho_A 334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAA 376 (605)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 9889998874656799999999968885678797038998799
No 38
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide- binding, phosphoprotein, polymorphism; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3fzh_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 1ngh_A* 1ngd_A* 1ngf_A* 1bup_A* 1nga_A* ...
Probab=55.83 E-value=4.8 Score=18.56 Aligned_cols=46 Identities=28% Similarity=0.377 Sum_probs=31.5
Q ss_pred CEEEEECCHHHHHHHHHHHH-HCC-CCE-EECCHHHHHHHHHHHHHHHHC
Q ss_conf 63899848589999999999-809-843-433879999999999999970
Q T0628 248 QAISLVAGSSLTSRYQQAFA-AIG-REV-SAVAGDTAFQTGIRSIAYAVA 294 (295)
Q Consensus 248 ~~v~LiG~~~L~~~Y~~AL~-~~G-~~~-~~~d~d~a~~~Gl~~ia~a~~ 294 (295)
+.|.|+|........+..++ .++ .++ +..+.++++-.|..-.+ |++
T Consensus 353 ~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~np~~aVa~GAa~~a-a~L 401 (404)
T 3i33_A 353 QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA-AIL 401 (404)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHH-HHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH-HHH
T ss_conf 9899989300347999999997299988878881536999999997-877
No 39
>1ig8_A Hexokinase PII, hexokinase B; mixed alpha beta, two domains, cleft, transferase; 2.20A {Saccharomyces cerevisiae} SCOP: c.55.1.3 c.55.1.3 PDB: 3b8a_X*
Probab=55.83 E-value=6.2 Score=17.86 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=33.6
Q ss_pred CCEEEEECCCHHHEEEEECC--C----CEEEECCCCCCHH-HCCCCCHHHHHHHHHHHH--------CCCCCCEEEE
Q ss_conf 54478862763146766407--8----4412001210022-158756489999999862--------1789818997
Q T0628 6 ARYIAIDWGSTNLRAWLYQG--E----ECLESRQSEAGVT-RLNGRSPAAVLAEITQHW--------RDGATPVVMA 67 (295)
Q Consensus 6 ~~~IaiDwGTtnlR~~l~~~--~----~vl~~~~~~~Gv~-~~~~~~f~~~l~~~~~~~--------~~~~~PVi~~ 67 (295)
-+||++|-|-||+|+-+++= + ++-.+++-+.-|+ ..+++.|=....+.+... .+..+||=.|
T Consensus 80 GdylaiDlgGtnlrvvlV~l~~drs~d~tqs~~rqpd~~r~tQnpd~lf~aia~~l~af~d~q~~~g~d~~lpvGft 156 (486)
T 1ig8_A 80 GDFLAIDLGGTNLRVVLVKLGGDRTFDTTQSKYRLPDAMRTTQNPDELWEFIADSLKAFIDEQFPQGISEPIPLGFT 156 (486)
T ss_dssp EEEEEEEECSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGCSCTHHHHHHHHHHHHHHHHHHCTTCCCSCEEEEEE
T ss_pred CCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 65699941798369999830367773666656406314442278188999999999986453123476750000489
No 40
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein structure initiative; 2.30A {Porphyromonas gingivalis W83} SCOP: c.55.1.5 c.55.1.5
Probab=49.52 E-value=11 Score=16.26 Aligned_cols=123 Identities=15% Similarity=0.063 Sum_probs=63.5
Q ss_pred EEEEECCCHHHEEEEECCCCEEEECCCCCCHHHCCCCCHHHHHHHHH---HH-HCCC--CCCEEEECCCCCCCCCCCCCC
Q ss_conf 47886276314676640784412001210022158756489999999---86-2178--981899755155124623785
Q T0628 8 YIAIDWGSTNLRAWLYQGEECLESRQSEAGVTRLNGRSPAAVLAEIT---QH-WRDG--ATPVVMAGMVGSNVGWKIAPY 81 (295)
Q Consensus 8 ~IaiDwGTtnlR~~l~~~~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~---~~-~~~~--~~PVi~~GMigS~~Gw~Eapy 81 (295)
.++||-|-|.+|+-+.|+++++.+.++. |. +-...+++.+...+. .+ .... .+..+..|+.|...
T Consensus 2 iL~VDgGGTKT~~~l~~~g~~i~~~~~g-g~-N~~~~~~~~~~~~l~~~i~~~~~~~~~~i~~~~~~~ag~~~------- 72 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAKEGKSLGRFQTS-GI-NPFQQDRNEIDTALRSEVLPAIGQKASSIRAVYFYGAGCTP------- 72 (291)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEE-CC-CTTTSCHHHHHHHHTTTTHHHHTTSTTTCCEEEEEETTCCT-------
T ss_pred EEEEEECHHHEEEEEECCCCEEEEEECC-CC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC-------
T ss_conf 8999926104689998899789999768-78-83117999999999999999985367681037887404663-------
Q ss_pred CCCCCCHHHHHHHHHC---CCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEE-CCEEEE
Q ss_conf 4578897886354204---798668835410078888765222699999987238897898448872168862-886888
Q T0628 82 LPLPAAFSDIGQQLTA---VGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMPGTHCKWVLAD-RRQIHD 157 (295)
Q Consensus 82 ~~~Pa~l~~l~~~~~~---~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLPGTHsKWv~v~-~g~I~~ 157 (295)
.....+...+.. ....+.+.. | -+.-+.+. ....+|+++..||=|.-...+ +|++.+
T Consensus 73 ----~~~~~~~~~~~~~~~~~~~v~v~~----------D----~~~a~~~a-~~~~~Giv~i~GTGS~~~~~~~~g~~~r 133 (291)
T 1zbs_A 73 ----AKAPMLNEALDSMLPHCDRIEVAG----------D----MLGAARAL-CGDSEGIACILGTGSNSCLFDGREIKAN 133 (291)
T ss_dssp ----TTHHHHHHHHHHHSTTCSEEEEEC----------H----HHHHHHHH-TTTSCEEEEEESSSEEEEEECSSSEEEE
T ss_pred ----CCCHHHHHHHHHHCCCCCEEEEEC----------C----CHHHHHHH-CCCCCEEEEECCCCCEEEEEECCCCEEE
T ss_conf ----101578999997537887399963----------8----46888861-3678508998588834799968996776
Q ss_pred E
Q ss_conf 6
Q T0628 158 F 158 (295)
Q Consensus 158 f 158 (295)
+
T Consensus 134 ~ 134 (291)
T 1zbs_A 134 V 134 (291)
T ss_dssp C
T ss_pred C
T ss_conf 6
No 41
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=48.35 E-value=11 Score=16.15 Aligned_cols=18 Identities=33% Similarity=0.586 Sum_probs=16.5
Q ss_pred CEEEEECCCHHHEEEEEC
Q ss_conf 447886276314676640
Q T0628 7 RYIAIDWGSTNLRAWLYQ 24 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~ 24 (295)
.|+|+|-|-||||+-+++
T Consensus 69 ~~LAlDlGGTn~RV~~V~ 86 (451)
T 1bdg_A 69 NFLALDLGGTNYRVLSVT 86 (451)
T ss_dssp EEEEEEESSSSEEEEEEE
T ss_pred EEEEEEECCCCEEEEEEE
T ss_conf 999999189858999999
No 42
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide formyl transferase; purine ribonucleotide biosynthesis, PURT; HET: ADP; 1.70A {Pyrococcus horikoshii OT3} PDB: 2czg_A*
Probab=47.18 E-value=12 Score=16.03 Aligned_cols=19 Identities=5% Similarity=0.093 Sum_probs=7.9
Q ss_pred HHHHHHHHHCCCCCEEEEC
Q ss_conf 7886354204798668835
Q T0628 88 FSDIGQQLTAVGDNIWIIP 106 (295)
Q Consensus 88 l~~l~~~~~~~~~~v~iiP 106 (295)
++++.......+.|+.+=|
T Consensus 145 ~~e~~~~~~~ig~PvVvKp 163 (433)
T 2dwc_A 145 LDELYEACEKIGYPCHTKA 163 (433)
T ss_dssp HHHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEE
T ss_conf 9999999997099715640
No 43
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics, structural genomics consortium, SGC, allosteric enzyme; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=46.60 E-value=12 Score=15.97 Aligned_cols=25 Identities=32% Similarity=0.525 Sum_probs=19.1
Q ss_pred CEEEEECCCHHHEEEEEC--CCCEEEE
Q ss_conf 447886276314676640--7844120
Q T0628 7 RYIAIDWGSTNLRAWLYQ--GEECLES 31 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~--~~~vl~~ 31 (295)
.|+|+|-|-||||+-+++ ++..+.+
T Consensus 60 ~fLAlDlGGTnlRV~~v~L~~~~~~~~ 86 (445)
T 3hm8_A 60 DFLALDLGGTNFRVLLVRVTTGVQITS 86 (445)
T ss_dssp EEEEEEESSSSEEEEEEEESSSEEEEE
T ss_pred EEEEEEECCCCEEEEEEEECCCCEEEE
T ss_conf 899999689848999999779916888
No 44
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=46.14 E-value=11 Score=16.27 Aligned_cols=44 Identities=25% Similarity=0.304 Sum_probs=32.4
Q ss_pred CCEEEEECCHHHHHHHHHHHH-HCC-CC-EEECCHHHHHHHHHHHHH
Q ss_conf 963899848589999999999-809-84-343387999999999999
Q T0628 247 QQAISLVAGSSLTSRYQQAFA-AIG-RE-VSAVAGDTAFQTGIRSIA 290 (295)
Q Consensus 247 ~~~v~LiG~~~L~~~Y~~AL~-~~G-~~-~~~~d~d~a~~~Gl~~ia 290 (295)
-+.|.|+|.......-+..|+ .+| -. .+.++.|+++-.|-.-.+
T Consensus 331 Id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~n~deaVa~GAA~~a 377 (554)
T 1yuw_A 331 IHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 377 (554)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 97899989827447899999998199888888796256899899999
No 45
>1z05_A Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=45.38 E-value=13 Score=15.85 Aligned_cols=143 Identities=20% Similarity=0.209 Sum_probs=74.7
Q ss_pred CCEEEEECCCHHHEEEEEC-CCCEEEECCCCCCHHHCCCCCHHHHHHH---HHHHHCC----CCCCE-----EEECCCCC
Q ss_conf 5447886276314676640-7844120012100221587564899999---9986217----89818-----99755155
Q T0628 6 ARYIAIDWGSTNLRAWLYQ-GEECLESRQSEAGVTRLNGRSPAAVLAE---ITQHWRD----GATPV-----VMAGMVGS 72 (295)
Q Consensus 6 ~~~IaiDwGTtnlR~~l~~-~~~vl~~~~~~~Gv~~~~~~~f~~~l~~---~~~~~~~----~~~PV-----i~~GMigS 72 (295)
.+.|+||.|.+++++-++| .++++.+.+.+ ++...++.++.. .+.++.. ..-.+ -+.|.+-+
T Consensus 108 ~~~iGVdig~~~i~~~l~Dl~G~vl~~~~~~-----~~~~~~~~~l~~i~~~i~~~l~~~~~~~~~i~gIgia~pG~vd~ 182 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHELGGEVLIDTKID-----IHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNS 182 (429)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEEE-----CCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEET
T ss_pred EEEEEEEECCCEEEEEEECCCCCEEEEEEEC-----CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCC
T ss_conf 6999999899989999996999799999613-----45798789999999999999997076656246786532025447
Q ss_pred CCCCC-CCCCCCC-CCCHHH-HHHHHHCCCCCEEEECCEECCCCCCCCCC-CCHHHHHHHHHHCCCCCEEEECCCCCEEE
Q ss_conf 12462-3785457-889788-63542047986688354100788887652-22699999987238897898448872168
Q T0628 73 NVGWK-IAPYLPL-PAAFSD-IGQQLTAVGDNIWIIPGLCVSRDDNHNVM-RGEETQLLGARALAPSSVYVMPGTHCKWV 148 (295)
Q Consensus 73 ~~Gw~-Eapy~~~-Pa~l~~-l~~~~~~~~~~v~iiPGl~~~~~~~~DVM-RGEEtqi~G~l~~~~~~~icLPGTHsKWv 148 (295)
..|-. ..|...- ...+.+ |.. .++.||++.--. +.+ -||- .+|......+.+++..|+---=.
T Consensus 183 ~~g~v~~~~~~~w~~~~l~~~l~~---~~~~pv~v~NDa--------~aaalaE~--~~g~~~~~~~~v~i~~g~GiG~g 249 (429)
T 1z05_A 183 EQGIVLQMPHYNVKNLALGPEIYK---ATGLPVFVANDT--------RAWALAEK--LFGHSQDVDNSVLISIHHGLGAG 249 (429)
T ss_dssp TTTEEEECSSSBCSSBCHHHHHHH---HHCSCEEEEEHH--------HHHHHHHH--HHSTTTTCSSEEEEEESSSEEEE
T ss_pred CCCEECCCCCCCCCCCCHHHHHHH---HHHHHEEECCCC--------CHHHHHHH--HHHHCCCCCCCEEEEECCCCEEE
T ss_conf 776232577520100203888754---432201102651--------03445666--54312577541488841576023
Q ss_pred EEECCEEEEEECCCHHHH
Q ss_conf 862886888630201899
Q T0628 149 LADRRQIHDFRTVLTGEL 166 (295)
Q Consensus 149 ~v~~g~I~~f~T~mTGEL 166 (295)
.+.+|++..=.....||+
T Consensus 250 ii~~G~l~~G~~g~AGEi 267 (429)
T 1z05_A 250 IVLDGRVLQGRHGNIGEL 267 (429)
T ss_dssp EEETTEECCTTTTCTTBC
T ss_pred EEECCCCCCCCCCCCCCC
T ss_conf 464475210246665545
No 46
>3f9m_A Glucokinase; hexokinase IV, alternative splicing, ATP- binding, diabetes mellitus, disease mutation, glycolysis, nucleotide-binding, polymorphism; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=42.16 E-value=9.8 Score=16.59 Aligned_cols=18 Identities=33% Similarity=0.722 Sum_probs=16.4
Q ss_pred CEEEEECCCHHHEEEEEC
Q ss_conf 447886276314676640
Q T0628 7 RYIAIDWGSTNLRAWLYQ 24 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~ 24 (295)
.|+|+|-|-||||+-+++
T Consensus 78 ~fLAlDlGGTnlRV~~V~ 95 (470)
T 3f9m_A 78 DFLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp EEEEEEESSSEEEEEEEE
T ss_pred EEEEEEECCCCEEEEEEE
T ss_conf 999997389848999999
No 47
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=41.29 E-value=15 Score=15.45 Aligned_cols=17 Identities=41% Similarity=0.767 Sum_probs=8.4
Q ss_pred CEEEEECCCHHHEEEEE
Q ss_conf 44788627631467664
Q T0628 7 RYIAIDWGSTNLRAWLY 23 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~ 23 (295)
.|+|+|-|-||||+-++
T Consensus 527 ~fLAlDlGGTNlRV~~V 543 (917)
T 1cza_N 527 DFLALDLGGTNFRVLLV 543 (917)
T ss_dssp EEEEEEESSSSEEEEEE
T ss_pred EEEEEEECCCCEEEEEE
T ss_conf 89999957971899999
No 48
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A
Probab=40.49 E-value=15 Score=15.37 Aligned_cols=135 Identities=13% Similarity=0.063 Sum_probs=65.0
Q ss_pred EEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCC---EEEECCCCCCCCC------C
Q ss_conf 478862763146766407-84412001210022158756489999999862178981---8997551551246------2
Q T0628 8 YIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWRDGATP---VVMAGMVGSNVGW------K 77 (295)
Q Consensus 8 ~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~~~~P---Vi~~GMigS~~Gw------~ 77 (295)
+++||-|-||+|+-++|. ++++++.+.+ ...++..+..+.....+.... |=+.|.+-...+- .
T Consensus 5 ~~GIDiGgT~i~~~l~d~~G~il~~~~~~-------t~~~~~~~~~i~~~i~~~~~~~igi~~~G~vd~~~~~~~~g~i~ 77 (302)
T 3epq_A 5 LGGIEAGGTXFVCAVGREDGTIIDRIEFP-------TXMPDETIEXVIQYFSQFSLQAIGIGSFGPVDNDXTSQTYGTIT 77 (302)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEE-------CCCHHHHHHHHHHHHTTSCCSEEEEEECSSEECCTTSTTTTEEC
T ss_pred EEEEEECCCEEEEEEECCCCCEEEEEEEC-------CCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCEEE
T ss_conf 99999777779999996999599999965-------89979999999999987147655881014013566641111692
Q ss_pred CCCCCCCC-CCHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCEEE
Q ss_conf 37854578-89788635420479866883541007888876522269999998723889789844887216886288688
Q T0628 78 IAPYLPLP-AAFSDIGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMPGTHCKWVLADRRQIH 156 (295)
Q Consensus 78 Eapy~~~P-a~l~~l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLPGTHsKWv~v~~g~I~ 156 (295)
..|...-- ..+.+.-. ...+.||++.--.. . ..-||- .+|......+-++...||--==..+.+|++.
T Consensus 78 ~~~~~~w~~~~l~~~l~--~~~~~pv~v~NDa~------a-aalaE~--~~G~~~~~~~~~~l~igtGiG~gii~~g~l~ 146 (302)
T 3epq_A 78 ATPXAGWRHYPFLQTVX--NEMXIPVGFSTDVN------A-AALGEF--LFGEAXGLDSCLYITIGTGIGAGAIVEGRLL 146 (302)
T ss_dssp CCSSTTTBTCCHHHHHH--HHHCSCEEEEEHHH------H-HHHHHH--HHSTTTTCSCEEEEEESSSEEEEEEETTEEC
T ss_pred CCCCCCCCCCCHHHHHH--HCCCCCEEEECCHH------H-HHHHHH--HHCCCCCCCEEEEEEECCCEEEEEEECCCEE
T ss_conf 58986637885499897--53564579964578------8-899999--7166689970899993585246788658321
Q ss_pred EEEC
Q ss_conf 8630
Q T0628 157 DFRT 160 (295)
Q Consensus 157 ~f~T 160 (295)
.=..
T Consensus 147 ~G~~ 150 (302)
T 3epq_A 147 QGLS 150 (302)
T ss_dssp CSSS
T ss_pred CCCC
T ss_conf 2675
No 49
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=39.02 E-value=15 Score=15.35 Aligned_cols=43 Identities=12% Similarity=0.151 Sum_probs=27.1
Q ss_pred CCCEEEEECCHHHHHHHHHHHH-HCCCC---EEEC-CHHHHHHHHHHHHH
Q ss_conf 9963899848589999999999-80984---3433-87999999999999
Q T0628 246 GQQAISLVAGSSLTSRYQQAFA-AIGRE---VSAV-AGDTAFQTGIRSIA 290 (295)
Q Consensus 246 ~~~~v~LiG~~~L~~~Y~~AL~-~~G~~---~~~~-d~d~a~~~Gl~~ia 290 (295)
.-+.|+|+|.++ .++...++ .+|.+ +... ++.-++..|+..++
T Consensus 272 ~~~~Vvl~GGgs--~l~~~~l~~~~~~~~~~~~~~~~p~~a~a~G~~~~g 319 (320)
T 2zgy_A 272 GYTHVMVIGGGA--ELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCCEEEEESTTH--HHHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCCEEEEECCHH--HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHC
T ss_conf 698699999688--999999999968999877878996778999999854
No 50
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=37.93 E-value=15 Score=15.34 Aligned_cols=127 Identities=10% Similarity=-0.031 Sum_probs=61.5
Q ss_pred EEEECCCHHHEEEEECCCCEEEECCCC-CCHHHCCCCCHHHHHHHHHHHHC-CCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 788627631467664078441200121-00221587564899999998621-7898189975515512462378545788
Q T0628 9 IAIDWGSTNLRAWLYQGEECLESRQSE-AGVTRLNGRSPAAVLAEITQHWR-DGATPVVMAGMVGSNVGWKIAPYLPLPA 86 (295)
Q Consensus 9 IaiDwGTtnlR~~l~~~~~vl~~~~~~-~Gv~~~~~~~f~~~l~~~~~~~~-~~~~PVi~~GMigS~~Gw~Eapy~~~Pa 86 (295)
+.||-|-|.+|+-+.|+++++.+.++. ........+...+.+...+.+-. ...+..+.-|+.|... |-
T Consensus 3 L~IDgGgTKT~~vl~d~g~~i~~~~~~g~Np~~~~~~~~~~~i~~~i~~~~~~~~i~~~~~g~aG~~~----------~~ 72 (291)
T 1zxo_A 3 LIADSGSTKTDWCVVLNGAVIKRLGTKGINPFFQSEEEIQQKLTASLLPQLPEGKFNAVYFYGAGCTP----------EK 72 (291)
T ss_dssp -CEECCTTCEEEEEECSSSEEEEEEECCCCTTTSCSTTTTTTTTC-------------CEEECTTCCT----------TT
T ss_pred EEEEECHHHEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC----------HH
T ss_conf 99993532638999949978999965767812079999999999999985152688758887411476----------01
Q ss_pred CHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEE-CCEEEEE
Q ss_conf 97886354204798668835410078888765222699999987238897898448872168862-8868886
Q T0628 87 AFSDIGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALAPSSVYVMPGTHCKWVLAD-RRQIHDF 158 (295)
Q Consensus 87 ~l~~l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~~~~~icLPGTHsKWv~v~-~g~I~~f 158 (295)
.-.-+...+..... .....|.-=-+.-+.+. ..+++|++|.-||=|--..++ +|++..+
T Consensus 73 ~~~~~~~~l~~~~~------------~~~~~v~~D~~~a~~~~-~~~~~Giv~i~GTGS~~~~~~~~g~~~r~ 132 (291)
T 1zxo_A 73 APVLRRAIADSLPV------------IGNIKANSDMLAAAHGL-CGQKAGIACILGTGSNSCFYNGKEIVSNI 132 (291)
T ss_dssp THHHHHHHHHHSCC------------CSCCEEECSHHHHHHHT-TTTSCBEEEEESSSEEEEEECSSSEEEEC
T ss_pred HHHHHHHHHHHCCC------------CCEEEEECCCHHHHHHH-CCCCCEEEEEECCCEEEEEEECCCCEEEC
T ss_conf 58888877886288------------86299956837899974-38998499992688006999589987971
No 51
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=31.54 E-value=21 Score=14.47 Aligned_cols=17 Identities=12% Similarity=0.110 Sum_probs=6.7
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 987889999999999999
Q T0628 220 PREQVSEFLSGLLIGAEV 237 (295)
Q Consensus 220 ~~~~~~~~LsGlLIG~El 237 (295)
.|=+..++ .||=+...+
T Consensus 245 Gpf~~~D~-~Gld~~~~v 261 (302)
T 1f0y_A 245 GPFELLDY-VGLDTTKFI 261 (302)
T ss_dssp CHHHHHHH-HCHHHHHHH
T ss_pred CHHHHHHH-HCHHHHHHH
T ss_conf 59999999-764999999
No 52
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=31.27 E-value=21 Score=14.44 Aligned_cols=29 Identities=7% Similarity=0.069 Sum_probs=12.9
Q ss_pred CCEEEEECCHHH-HHHHHHHHHHCCCCEEE
Q ss_conf 963899848589-99999999980984343
Q T0628 247 QQAISLVAGSSL-TSRYQQAFAAIGREVSA 275 (295)
Q Consensus 247 ~~~v~LiG~~~L-~~~Y~~AL~~~G~~~~~ 275 (295)
...+.++|+++- .++-...++..|..+..
T Consensus 162 ~~~~~v~gg~~~a~~~v~~ll~~~G~~~v~ 191 (215)
T 2vns_A 162 NRQVPICGDQPEAKRAVSEMALAMGFMPVD 191 (215)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCCCEEE
T ss_conf 657999569999999999999985998397
No 53
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha JMP134}
Probab=29.73 E-value=22 Score=14.27 Aligned_cols=18 Identities=11% Similarity=-0.001 Sum_probs=6.2
Q ss_pred EEEEEECCCHHHHHHHHH
Q ss_conf 688863020189999986
Q T0628 154 QIHDFRTVLTGELHHLLL 171 (295)
Q Consensus 154 ~I~~f~T~mTGELf~~L~ 171 (295)
.+....+.-.-++.+++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~ 178 (318)
T 3hwr_A 161 ELVIEPTSHGANLAAIFA 178 (318)
T ss_dssp EEEECCCTTTHHHHHHHH
T ss_pred CEECCCCCCHHHHHHHHH
T ss_conf 322044210014555665
No 54
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=28.40 E-value=24 Score=14.12 Aligned_cols=126 Identities=19% Similarity=0.268 Sum_probs=62.3
Q ss_pred CE-EEEECCCHHHEEEEEC--C-C--C--EEEE---CCCCCCHHHCCCC--CHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 44-7886276314676640--7-8--4--4120---0121002215875--64899999998621789818997551551
Q T0628 7 RY-IAIDWGSTNLRAWLYQ--G-E--E--CLES---RQSEAGVTRLNGR--SPAAVLAEITQHWRDGATPVVMAGMVGSN 73 (295)
Q Consensus 7 ~~-IaiDwGTtnlR~~l~~--~-~--~--vl~~---~~~~~Gv~~~~~~--~f~~~l~~~~~~~~~~~~PVi~~GMigS~ 73 (295)
.+ |.+|-|.|..|++++. . + . ++++ .+...|+.....+ .-...|..++..-....+||.+-.=+|-|
T Consensus 3 ~~~vViDAGSTGtRv~VY~~~~~~~~~~~~~~~~~~~k~~PGlss~~~~~~~~~~~l~~ll~~a~~~~TPi~l~ATAGmR 82 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLTMLLADAPIHNIPVYFYATAGMR 82 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCSHHHHHHHHHHHHTTCSCCSEEEEEEECHHHH
T ss_pred CEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 28999978989875899997688888852001157604677701456798999999999987520126865863362110
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHCC---CCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHCC--------CC----CEE
Q ss_conf 2462378545788978863542047---98668835410078888765222699999987238--------89----789
Q T0628 74 VGWKIAPYLPLPAAFSDIGQQLTAV---GDNIWIIPGLCVSRDDNHNVMRGEETQLLGARALA--------PS----SVY 138 (295)
Q Consensus 74 ~Gw~Eapy~~~Pa~l~~l~~~~~~~---~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~~--------~~----~~i 138 (295)
. .|- ..-.++-..+... ..+ +.++. .-||=|+|==++|+++.| ++ +++
T Consensus 83 l----L~~----~~~~~il~~v~~~l~~~~~-f~~~~--------~~visG~eEG~y~WitvNYllg~l~~~~~~TvG~l 145 (353)
T 3aap_A 83 L----LPQ----SQQKKYYDELEYWFRQQSQ-WQLVE--------AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVM 145 (353)
T ss_dssp T----SCH----HHHHHHHHHHHHHHHTCSS-EEEEE--------EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEE
T ss_pred C----CCH----HHHHHHHHHHHHHHHCCCC-CCCCC--------CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 4----788----9999999999998515887-75677--------54215831237699999988711379887708999
Q ss_pred EECCCCCEEEE
Q ss_conf 84488721688
Q T0628 139 VMPGTHCKWVL 149 (295)
Q Consensus 139 cLPGTHsKWv~ 149 (295)
=|=|.-+-.+.
T Consensus 146 DlGGaStQIaf 156 (353)
T 3aap_A 146 DMGGASVQIVF 156 (353)
T ss_dssp EECSSEEEEEE
T ss_pred ECCCCEEEEEE
T ss_conf 73886047874
No 55
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=25.90 E-value=26 Score=13.84 Aligned_cols=27 Identities=11% Similarity=0.078 Sum_probs=11.7
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 898189975515512462378545788
Q T0628 60 GATPVVMAGMVGSNVGWKIAPYLPLPA 86 (295)
Q Consensus 60 ~~~PVi~~GMigS~~Gw~Eapy~~~Pa 86 (295)
...+|.+.+--.........-+..+|.
T Consensus 41 ~Gh~V~v~~r~~~a~~~~~~~~~a~~~ 67 (209)
T 2raf_A 41 AGHEVTYYGSKDQATTLGEIVIMAVPY 67 (209)
T ss_dssp TTCEEEEECTTCCCSSCCSEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHCCCCCCH
T ss_conf 799679845998999986521135625
No 56
>1e4f_T Cell division protein FTSA; bacterial cell division, actin family; 1.9A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1e4g_T*
Probab=25.29 E-value=27 Score=13.77 Aligned_cols=28 Identities=14% Similarity=0.188 Sum_probs=22.7
Q ss_pred EEEEECCHHHHHHHHHHH-HHCCCCEEEC
Q ss_conf 389984858999999999-9809843433
Q T0628 249 AISLVAGSSLTSRYQQAF-AAIGREVSAV 276 (295)
Q Consensus 249 ~v~LiG~~~L~~~Y~~AL-~~~G~~~~~~ 276 (295)
.|+|+|.+..-......+ +.+|.+++..
T Consensus 331 ~VvL~GG~s~lpgl~~~l~~~~g~pvrv~ 359 (419)
T 1e4f_T 331 GVVLTGGGAKIPRINELATEVFKSPVRTG 359 (419)
T ss_dssp CEEEESGGGGSTTHHHHHHHHHCSCEEEC
T ss_pred EEEEECCHHCCHHHHHHHHHHHCCCEEEE
T ss_conf 39998821042009999999978980893
No 57
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=24.46 E-value=28 Score=13.67 Aligned_cols=66 Identities=14% Similarity=0.279 Sum_probs=40.4
Q ss_pred CCCCEEEEECCCHHHEEEEECCCCEEEECCCCCCHHHCC-CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCC
Q ss_conf 675447886276314676640784412001210022158-756489999999862178981899755155124
Q T0628 4 MTARYIAIDWGSTNLRAWLYQGEECLESRQSEAGVTRLN-GRSPAAVLAEITQHWRDGATPVVMAGMVGSNVG 75 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~~~vl~~~~~~~Gv~~~~-~~~f~~~l~~~~~~~~~~~~PVi~~GMigS~~G 75 (295)
|+-.++++|.|+-+.=+-.-|..+.++ .+.++.... ....-..+..++.+|.. -.++.|+.-...|
T Consensus 1 m~griLgiD~G~kriGvAisd~~~~~a---~pl~~i~~~~~~~~~~~i~~ii~e~~i---~~iViG~P~~~~g 67 (138)
T 1nu0_A 1 MSGTLMAFDFGTKSIGVAVGQRITGTA---RPLPAIKAQDGTPDWNIIERLLKEWQP---DEIIVGLPLNMDG 67 (138)
T ss_dssp CCCEEEEEECCSSEEEEEEEETTTTEE---EEEEEEEEETTEECHHHHHHHHHHHCC---SEEEEEEEECTTS
T ss_pred CCCCEEEEEECCCEEEEEEECCCCCCC---CCEEEEECCCCCHHHHHHHHHHHHCCC---CEEEECCCCCCCC
T ss_conf 997689999179979999947998740---140789816772689999998642487---3899644347778
No 58
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=23.99 E-value=28 Score=13.61 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=15.9
Q ss_pred CCCCCCCCCCCC-CHHHHHHHHHCCCCCEEEECC
Q ss_conf 462378545788-978863542047986688354
Q T0628 75 GWKIAPYLPLPA-AFSDIGQQLTAVGDNIWIIPG 107 (295)
Q Consensus 75 Gw~Eapy~~~Pa-~l~~l~~~~~~~~~~v~iiPG 107 (295)
|.--+||..++. +.+++.......+.|+-+-|.
T Consensus 135 GiPt~~f~~~~~~~~~el~~~~~~ig~P~vlK~~ 168 (403)
T 3k5i_A 135 GIPMAEHRELVENTPAELAKVGEQLGYPLMLKSK 168 (403)
T ss_dssp TCCBCCEEEESSCCHHHHHHHHHHHCSSEEEEES
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE
T ss_conf 9997875413556699999898863897799984
No 59
>3fh1_A Uncharacterized NTF2-like protein; NP_108339.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=23.52 E-value=28 Score=13.63 Aligned_cols=18 Identities=11% Similarity=0.130 Sum_probs=15.3
Q ss_pred EEEEECCEEEEEECCCHH
Q ss_conf 688628868886302018
Q T0628 147 WVLADRRQIHDFRTVLTG 164 (295)
Q Consensus 147 Wv~v~~g~I~~f~T~mTG 164 (295)
...+++|+|+..++||-|
T Consensus 112 ~f~~~dGkI~~~r~Y~~~ 129 (129)
T 3fh1_A 112 LMRVQDGRIVEAMGYVKG 129 (129)
T ss_dssp EEEEETTEEEEEEEEECC
T ss_pred EEEEECCEEEEEEEEECC
T ss_conf 999979999999878369
Done!