Query T0628 APC38818, Klebsiella pneumoniae, 295 residues
Match_columns 295
No_of_seqs 116 out of 235
Neff 5.7
Searched_HMMs 15564
Date Thu Jul 22 15:01:31 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0628.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0628.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zc6a1 c.55.1.5 (A:8-121) Pro 95.3 0.012 7.7E-07 34.3 4.5 34 3-37 2-36 (114)
2 d2p3ra1 c.55.1.4 (A:2-253) Gly 94.9 0.031 2E-06 31.7 5.7 35 5-39 2-37 (252)
3 d2ch5a2 c.55.1.5 (A:1-117) N-a 94.8 0.039 2.5E-06 31.0 5.9 71 4-74 1-80 (117)
4 d1r59o1 c.55.1.4 (O:5-256) Gly 93.1 0.039 2.5E-06 31.0 3.3 31 6-36 1-32 (252)
5 d2ap1a2 c.55.1.10 (A:1-117) Pu 88.5 0.79 5.1E-05 22.6 7.0 72 8-84 2-82 (117)
6 d2aa4a1 c.55.1.10 (A:1-119) N- 84.9 0.68 4.4E-05 23.0 4.4 71 7-78 2-75 (119)
7 d2gupa1 c.55.1.10 (A:1-114) Hy 81.7 1.6 0.00011 20.6 6.5 90 7-105 2-98 (114)
8 d1jcea1 c.55.1.1 (A:4-140) Pro 80.7 0.39 2.5E-05 24.6 1.8 24 8-31 2-25 (137)
9 d1bupa1 c.55.1.1 (A:4-188) Hea 77.0 0.68 4.4E-05 23.0 2.1 20 8-27 3-22 (185)
10 d1bupa1 c.55.1.1 (A:4-188) Hea 76.0 0.75 4.8E-05 22.7 2.1 21 8-28 3-23 (185)
11 d1q18a1 c.55.1.7 (A:2-111) Glu 70.9 3.2 0.00021 18.7 7.6 52 5-59 1-53 (110)
12 d1xc3a1 c.55.1.10 (A:1-118) Pu 69.6 3.4 0.00022 18.5 6.5 60 8-74 2-65 (118)
13 d1ig8a1 c.55.1.3 (A:18-224) He 68.6 3.2 0.00021 18.7 4.0 23 7-29 64-88 (207)
14 d1bdga1 c.55.1.3 (A:13-222) He 66.2 4 0.00026 18.1 4.4 18 7-24 67-84 (208)
15 d2yhxa_ i.12.1.1 (A:) Hexokina 65.7 4.1 0.00026 18.0 4.4 18 7-24 62-79 (457)
16 d1czan3 c.55.1.3 (N:466-670) M 65.0 3.5 0.00022 18.5 3.5 18 7-24 62-79 (205)
17 d1dkgd1 c.55.1.1 (D:3-185) Hea 64.5 1.7 0.00011 20.4 1.9 22 7-28 1-22 (183)
18 d1z05a3 c.55.1.10 (A:81-208) T 62.7 4.6 0.0003 17.7 5.1 32 4-35 2-34 (128)
19 d1czan1 c.55.1.3 (N:16-222) Ma 60.7 4.4 0.00028 17.8 3.4 19 6-24 63-81 (207)
20 d1z6ra2 c.55.1.10 (A:82-210) M 55.5 6.1 0.00039 16.9 4.8 96 6-105 4-112 (129)
21 d1kjqa2 c.30.1.1 (A:2-112) Gly 53.7 5.8 0.00038 17.0 3.1 35 245-279 9-43 (111)
22 d1woqa1 c.55.1.10 (A:11-139) I 53.1 6.7 0.00043 16.6 4.2 52 6-58 2-56 (129)
23 d1sz2a1 c.55.1.7 (A:3-321) Glu 52.2 6.9 0.00044 16.5 5.8 49 7-58 2-51 (319)
24 d3etja2 c.30.1.1 (A:1-78) N5-c 47.5 7.4 0.00048 16.3 2.8 32 249-280 3-34 (78)
25 d1v4sa1 c.55.1.3 (A:14-218) Gl 45.0 8.9 0.00057 15.8 4.9 19 6-24 59-77 (205)
26 d1zbsa2 c.55.1.5 (A:1-107) Hyp 42.1 9.2 0.00059 15.7 2.6 27 9-35 3-29 (107)
27 d1q1ra2 c.3.1.5 (A:115-247) Pu 41.2 10 0.00066 15.4 6.0 30 61-107 37-66 (133)
28 d1d7ya2 c.3.1.5 (A:116-236) NA 41.0 10 0.00066 15.4 5.6 15 92-106 46-60 (121)
29 d1nu0a_ c.55.3.8 (A:) Hypothet 38.2 11 0.00073 15.1 5.1 66 4-75 1-67 (138)
30 d1xhca2 c.3.1.5 (A:104-225) NA 30.0 15 0.00099 14.3 3.8 29 61-106 34-62 (122)
31 d3lada2 c.3.1.5 (A:159-277) Di 29.2 16 0.001 14.2 4.1 56 91-153 37-94 (119)
32 d1vhxa_ c.55.3.8 (A:) Hypothet 28.3 16 0.0011 14.1 4.5 62 7-74 3-67 (140)
33 d2ewsa1 c.55.1.14 (A:1-267) Ty 26.5 18 0.0011 13.9 4.6 25 4-31 1-26 (267)
34 d2d1pa1 c.114.1.1 (A:1-128) tR 25.0 15 0.00095 14.4 1.3 39 59-97 70-121 (128)
35 d1lssa_ c.2.1.9 (A:) Ktn Mja21 22.7 21 0.0013 13.5 3.0 17 261-277 102-118 (132)
36 d1h6va2 c.3.1.5 (A:171-292) Ma 22.5 21 0.0013 13.4 3.9 54 91-152 35-91 (122)
37 d1onfa2 c.3.1.5 (A:154-270) Gl 21.3 22 0.0014 13.3 3.9 58 91-155 37-106 (117)
38 d3bzka5 c.55.3.13 (A:325-473) 21.2 22 0.0014 13.3 2.5 23 139-161 10-35 (149)
No 1
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}
Probab=95.32 E-value=0.012 Score=34.34 Aligned_cols=34 Identities=24% Similarity=0.246 Sum_probs=27.0
Q ss_pred CCCCCEEEEECCCHHHEEEEECC-CCEEEECCCCCC
Q ss_conf 66754478862763146766407-844120012100
Q T0628 3 AMTARYIAIDWGSTNLRAWLYQG-EECLESRQSEAG 37 (295)
Q Consensus 3 ~m~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~G 37 (295)
.|+ ++|+||-|+|++|+-++|. ++++.+.+...+
T Consensus 2 sm~-y~lGID~GGT~tk~~l~d~~G~il~~~~~~~~ 36 (114)
T d1zc6a1 2 SIR-YLIGVDGGGTGTRIRLHASDGTPLAMAEGGAS 36 (114)
T ss_dssp CCC-EEEEEEECSSCEEEEEEETTCCEEEEEEESCC
T ss_pred CCC-EEEEEECCCCEEEEEEECCCCCEEEEEECCCC
T ss_conf 866-89999847010899999499989999972688
No 2
>d2p3ra1 c.55.1.4 (A:2-253) Glycerol kinase {Escherichia coli [TaxId: 562]}
Probab=94.93 E-value=0.031 Score=31.70 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=27.2
Q ss_pred CCCEEEEECCCHHHEEEEECC-CCEEEECCCCCCHH
Q ss_conf 754478862763146766407-84412001210022
Q T0628 5 TARYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVT 39 (295)
Q Consensus 5 ~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~ 39 (295)
+.++|+||-|||+.|+-++|. ++++++.+.+..+.
T Consensus 2 kky~lgiDiGTssvKa~l~d~~g~~~~~~~~~~~~~ 37 (252)
T d2p3ra1 2 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQI 37 (252)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCB
T ss_pred CEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCC
T ss_conf 749999982023456558929898999998617725
No 3
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.76 E-value=0.039 Score=31.02 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=47.4
Q ss_pred CCCCEEEEECCCHHHEEEEECC-CCEEEECCCCC-CHHHCCCCCHHHHHHHHHHHHCC-----C--CCCEEEECCCCCCC
Q ss_conf 6754478862763146766407-84412001210-02215875648999999986217-----8--98189975515512
Q T0628 4 MTARYIAIDWGSTNLRAWLYQG-EECLESRQSEA-GVTRLNGRSPAAVLAEITQHWRD-----G--ATPVVMAGMVGSNV 74 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~-Gv~~~~~~~f~~~l~~~~~~~~~-----~--~~PVi~~GMigS~~ 74 (295)
|+..|+.||-|-|.+|+-++|. ++++.+.+..- .......+...+.+.+.+.+.+. . .+..+..||.|...
T Consensus 1 m~~~~~GIDgGGTkT~~~l~d~~G~~l~~~~~g~~N~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~i~~i~~GlAG~~~ 80 (117)
T d2ch5a2 1 MAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQ 80 (117)
T ss_dssp SSCEEEEEEECTTCEEEEEEETTSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTC
T ss_pred CCCEEEEEECCHHHEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
T ss_conf 98589999848025799999899999999975788731100899999999999999987168877550389999633686
No 4
>d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]}
Probab=93.13 E-value=0.039 Score=31.04 Aligned_cols=31 Identities=32% Similarity=0.387 Sum_probs=24.8
Q ss_pred CCEEEEECCCHHHEEEEECC-CCEEEECCCCC
Q ss_conf 54478862763146766407-84412001210
Q T0628 6 ARYIAIDWGSTNLRAWLYQG-EECLESRQSEA 36 (295)
Q Consensus 6 ~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~ 36 (295)
+++|+||-|||+.|+-++|. ++++++.+.+.
T Consensus 1 nyvlgiDiGTtsvKa~l~D~~g~~~~~~~~~~ 32 (252)
T d1r59o1 1 NYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEF 32 (252)
T ss_dssp CEEEEEBCCSSBCBCCEECSSSCBCCCCCCBC
T ss_pred CEEEEEEECCCCEEEEEEECCCCEEEEEEEEC
T ss_conf 97999984223435358948798999999847
No 5
>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}
Probab=88.47 E-value=0.79 Score=22.61 Aligned_cols=72 Identities=18% Similarity=0.262 Sum_probs=45.4
Q ss_pred EEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHH---HHHHHHHHHCC-----CCCCEEEECCCCCCCCCCC
Q ss_conf 478862763146766407-84412001210022158756489---99999986217-----8981899755155124623
Q T0628 8 YIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAA---VLAEITQHWRD-----GATPVVMAGMVGSNVGWKI 78 (295)
Q Consensus 8 ~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~---~l~~~~~~~~~-----~~~PVi~~GMigS~~Gw~E 78 (295)
||+||-|.|+.|+=++|. ++++.+++-+ ++...++. .+.+++..+.. ..+=|-+.|.+-+..|.+.
T Consensus 2 yiGiDiGgT~i~~~l~d~~g~i~~~~~~~-----t~~~~~~~~~~~i~~~i~~~~~~~~~~~~igi~~pG~vd~~~g~i~ 76 (117)
T d2ap1a2 2 YYGFDIGGTKIALGVFDSTRRLQWEKRVP-----TPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGTLY 76 (117)
T ss_dssp EEEEEECSSEEEEEEEETTCCEEEEEEEE-----CCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTTSCCB
T ss_pred EEEEEECCCEEEEEEEECCCCEEEEEEEE-----ECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEE
T ss_conf 99999780109999996999999998774-----0245789999999999999886267412698723775434566660
Q ss_pred CCCCCC
Q ss_conf 785457
Q T0628 79 APYLPL 84 (295)
Q Consensus 79 apy~~~ 84 (295)
.++..-
T Consensus 77 ~~~~~~ 82 (117)
T d2ap1a2 77 AANVPA 82 (117)
T ss_dssp CTTCTT
T ss_pred CCCCCC
T ss_conf 467655
No 6
>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}
Probab=84.87 E-value=0.68 Score=23.01 Aligned_cols=71 Identities=17% Similarity=0.206 Sum_probs=41.2
Q ss_pred CEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCC--CCEEEECCCCCCCCCCC
Q ss_conf 4478862763146766407-844120012100221587564899999998621789--81899755155124623
Q T0628 7 RYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWRDGA--TPVVMAGMVGSNVGWKI 78 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~~~--~PVi~~GMigS~~Gw~E 78 (295)
+.|+||-|-|++|+-++|. ++++.+.+.+... .-.++.+...+.+++.++.... +-|-+.|++-...|...
T Consensus 2 ~~lgiDiGgT~i~~~l~d~~G~i~~~~~~~~~~-~~~~~~~~~~i~~~i~~~~~~~~~igI~~pG~v~~~~~~~~ 75 (119)
T d2aa4a1 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTPA-SQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLAL 75 (119)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECCS-SCCHHHHHHHHHHHHTTTGGGCSEEEEEESSEEETTEEECS
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEE
T ss_conf 099999686879999994999898767770366-67688999999999997533476389984326739986897
No 7
>d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=81.66 E-value=1.6 Score=20.56 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=47.0
Q ss_pred CEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCC---EEEECCCCCCCCCC-CCCC
Q ss_conf 4478862763146766407-84412001210022158756489999999862178981---89975515512462-3785
Q T0628 7 RYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWRDGATP---VVMAGMVGSNVGWK-IAPY 81 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~~~~P---Vi~~GMigS~~Gw~-Eapy 81 (295)
+.++||-|-|++|+-++|. ++++++.+.+ + +..++.....+.....+..+- |=+.|.+-...|-+ ..|.
T Consensus 2 ~i~~iDiGgT~i~~~l~d~~g~i~~~~~~~-----t-~~~~~~~~~~i~~~~~~~~i~gIGi~~pG~vd~~~g~i~~~~~ 75 (114)
T d2gupa1 2 TIATIDIGGTGIKFASLTPDGKILDKTSIS-----T-PENLEDLLAWLDQRLSEQDYSGIAMSVPGAVNQETGVIDGFSA 75 (114)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEEC-----C-CSSHHHHHHHHHHHHTTSCCSEEEEEESSEECTTTCBEESCCS
T ss_pred EEEEEEECCCCEEEEEECCCCCEEEEEEEC-----C-CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCC
T ss_conf 699999681039999990999799999971-----4-3559999999999861144535999656653577538974445
Q ss_pred CCC--CCCHHHHHHHHHCCCCCEEEE
Q ss_conf 457--889788635420479866883
Q T0628 82 LPL--PAAFSDIGQQLTAVGDNIWII 105 (295)
Q Consensus 82 ~~~--Pa~l~~l~~~~~~~~~~v~ii 105 (295)
++. ...+.++- .+++.||++-
T Consensus 76 l~~~~~~~l~~~l---~~~~~pV~ve 98 (114)
T d2gupa1 76 VPYIHGFSWYEAL---SSYQLPVHLE 98 (114)
T ss_dssp SGGGSSSBHHHHT---GGGCCCEEEE
T ss_pred CCCCCCCCHHHHH---HHCCCCEEEE
T ss_conf 6754588379999---8679979997
No 8
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}
Probab=80.68 E-value=0.39 Score=24.59 Aligned_cols=24 Identities=25% Similarity=0.306 Sum_probs=18.8
Q ss_pred EEEEECCCHHHEEEEECCCCEEEE
Q ss_conf 478862763146766407844120
Q T0628 8 YIAIDWGSTNLRAWLYQGEECLES 31 (295)
Q Consensus 8 ~IaiDwGTtnlR~~l~~~~~vl~~ 31 (295)
=|+||-||||..++..+.+.++.+
T Consensus 2 ~iGIDlGTtns~va~~~~~~v~~~ 25 (137)
T d1jcea1 2 DIGIDLGTANTLVFLRGKGIVVNE 25 (137)
T ss_dssp EEEEEECSSEEEEEETTTEEEEEE
T ss_pred EEEEECCHHHEEEEEECCCEEEEC
T ss_conf 389975756299999689989644
No 9
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}
Probab=76.97 E-value=0.68 Score=23.01 Aligned_cols=20 Identities=30% Similarity=0.330 Sum_probs=17.4
Q ss_pred EEEEECCCHHHEEEEECCCC
Q ss_conf 47886276314676640784
Q T0628 8 YIAIDWGSTNLRAWLYQGEE 27 (295)
Q Consensus 8 ~IaiDwGTtnlR~~l~~~~~ 27 (295)
-|+||.||||..+..++.+.
T Consensus 3 vvGIDfGTt~s~va~~~~g~ 22 (185)
T d1bupa1 3 AVGIDLGSTYSCVGVFQHGK 22 (185)
T ss_dssp CEEEEECSSEEEEEEEETTE
T ss_pred EEEEECCHHCEEEEEEECCE
T ss_conf 99998682308999998999
No 10
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} SCOP: d1hpma1 d3hsca1 d1atra1 d2bupa1 d1kaza1 d1ngba1 d1ngha1 d1kaxa1 d1ngaa1 d1hx1a1 d1kaya1 d1ngga1 d1qqoa1 d1ba1a1 d1qqma1 d1qqna1 d1s3xa1 d1hjoa1 d1dkgd1
Probab=75.99 E-value=0.75 Score=22.74 Aligned_cols=21 Identities=29% Similarity=0.314 Sum_probs=17.5
Q ss_pred EEEEECCCHHHEEEEECCCCE
Q ss_conf 478862763146766407844
Q T0628 8 YIAIDWGSTNLRAWLYQGEEC 28 (295)
Q Consensus 8 ~IaiDwGTtnlR~~l~~~~~v 28 (295)
-|+||+||||..+..++.+.+
T Consensus 3 viGIDfGTt~s~va~~~~g~~ 23 (185)
T d1bupa1 3 AVGIDLGSTYSCVGVFQHGKV 23 (185)
T ss_dssp CEEEEECSSEEEEEEEETTEE
T ss_pred EEEEEECCCCEEEEEEECCEE
T ss_conf 889861510559889768925
No 11
>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]}
Probab=70.89 E-value=3.2 Score=18.68 Aligned_cols=52 Identities=21% Similarity=0.107 Sum_probs=35.0
Q ss_pred CCCEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf 754478862763146766407-8441200121002215875648999999986217
Q T0628 5 TARYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWRD 59 (295)
Q Consensus 5 ~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~ 59 (295)
|.+.+++|=|-||.|.=+++. +.++...+... ......++..+...+.++..
T Consensus 1 t~~~L~~DIGGTn~r~alv~~~~~~l~~~~~~~---~~~~~~~~~~i~~~~~~~~~ 53 (110)
T d1q18a1 1 TKYALVGDVGGTNARLALCDIASGEISQAKTYS---GLDYPSLEAVIRVYLEEHKV 53 (110)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEE---GGGCSCHHHHHHHHHHHHTC
T ss_pred CCEEEEEEECCHHEEEEEEECCCCEEEEEEEEC---CCCHHHHHHHHHHHHHHCCC
T ss_conf 948999998800599999986998088888513---54324599999998763366
No 12
>d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]}
Probab=69.61 E-value=3.4 Score=18.51 Aligned_cols=60 Identities=12% Similarity=0.119 Sum_probs=35.7
Q ss_pred EEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCC---CEEEECCCCCCC
Q ss_conf 478862763146766407-8441200121002215875648999999986217898---189975515512
Q T0628 8 YIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWRDGAT---PVVMAGMVGSNV 74 (295)
Q Consensus 8 ~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~~~~---PVi~~GMigS~~ 74 (295)
+++||=|.|++|+=++|. ++++.+.+-+ ....+..+..+.....+..+ -|-++|.+....
T Consensus 2 ~~giDiGgT~i~~~l~d~~g~i~~~~~~~-------t~~~~~~~~~i~~~~~~~~~~~igi~~~G~v~~~~ 65 (118)
T d1xc3a1 2 LGGIEAGGTKFVCAVGREDGTIIDRIEFP-------TKMPDETIEKVIQYFSQFSLQAIGIGSFGPVDNDK 65 (118)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEE-------CCCHHHHHHHHHHHHTTSCCSEEEEEECSSBCCCT
T ss_pred EEEEEECCCEEEEEEECCCCCEEEEEEEC-------CCCHHHHHHHHHHHHHHCCCEECCEEEEEEEECCC
T ss_conf 99999664789999995999899999965-------89979999999999752144034466773234578
No 13
>d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]}
Probab=68.62 E-value=3.2 Score=18.66 Aligned_cols=23 Identities=43% Similarity=0.770 Sum_probs=18.2
Q ss_pred CEEEEECCCHHHEEEEEC--CCCEE
Q ss_conf 447886276314676640--78441
Q T0628 7 RYIAIDWGSTNLRAWLYQ--GEECL 29 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~--~~~vl 29 (295)
.++|+|-|-||||+-+++ +++..
T Consensus 64 ~flalDlGGTnlRv~~V~L~g~~~~ 88 (207)
T d1ig8a1 64 DFLAIDLGGTNLRVVLVKLGGDRTF 88 (207)
T ss_dssp EEEEEEECSSEEEEEEEEEESSSCE
T ss_pred EEEEEEECCCEEEEEEEEECCCCCE
T ss_conf 0899984286589999997699866
No 14
>d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]}
Probab=66.24 E-value=4 Score=18.07 Aligned_cols=18 Identities=33% Similarity=0.586 Sum_probs=16.2
Q ss_pred CEEEEECCCHHHEEEEEC
Q ss_conf 447886276314676640
Q T0628 7 RYIAIDWGSTNLRAWLYQ 24 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~ 24 (295)
.|+|+|-|-||+|+-+++
T Consensus 67 ~fLalDlGGTn~Rv~~V~ 84 (208)
T d1bdga1 67 NFLALDLGGTNYRVLSVT 84 (208)
T ss_dssp EEEEEEESSSSEEEEEEE
T ss_pred EEEEEEECCCEEEEEEEE
T ss_conf 289998427658999999
No 15
>d2yhxa_ i.12.1.1 (A:) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), BIII [TaxId: 4932]} SCOP: d1hkga_ d1ig8a2
Probab=65.69 E-value=4.1 Score=18.00 Aligned_cols=18 Identities=28% Similarity=0.455 Sum_probs=16.4
Q ss_pred CEEEEECCCHHHEEEEEC
Q ss_conf 447886276314676640
Q T0628 7 RYIAIDWGSTNLRAWLYQ 24 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~ 24 (295)
.|+|+|-|-||||+-+++
T Consensus 62 ~fLAlDlGGTNlRV~~V~ 79 (457)
T d2yhxa_ 62 SFLAIVMGGGDLEVILIS 79 (457)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEE
T ss_conf 699997378726999999
No 16
>d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.98 E-value=3.5 Score=18.46 Aligned_cols=18 Identities=39% Similarity=0.752 Sum_probs=16.0
Q ss_pred CEEEEECCCHHHEEEEEC
Q ss_conf 447886276314676640
Q T0628 7 RYIAIDWGSTNLRAWLYQ 24 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~ 24 (295)
.++|+|-|-||||+-+++
T Consensus 62 ~fLalDlGGTn~Rv~~V~ 79 (205)
T d1czan3 62 DFLALDLGGTNFRVLLVK 79 (205)
T ss_dssp EEEEEEESSSSEEEEEEE
T ss_pred EEEEEEECCCEEEEEEEE
T ss_conf 699997417568999999
No 17
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=64.49 E-value=1.7 Score=20.43 Aligned_cols=22 Identities=32% Similarity=0.424 Sum_probs=17.6
Q ss_pred CEEEEECCCHHHEEEEECCCCE
Q ss_conf 4478862763146766407844
Q T0628 7 RYIAIDWGSTNLRAWLYQGEEC 28 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~~~~v 28 (295)
+.|+||.||||..+-.++++.+
T Consensus 1 ~VvGIDfGTt~s~va~~~~~~~ 22 (183)
T d1dkgd1 1 KIIGIDLGTTNSCVAIMDGTTP 22 (183)
T ss_dssp CCCEEECCSSEEEEEEEETTEE
T ss_pred CEEEEECCHHCEEEEEEECCEE
T ss_conf 9999985820289999999998
No 18
>d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]}
Probab=62.71 E-value=4.6 Score=17.65 Aligned_cols=32 Identities=16% Similarity=0.203 Sum_probs=26.1
Q ss_pred CCCCEEEEECCCHHHEEEEECC-CCEEEECCCC
Q ss_conf 6754478862763146766407-8441200121
Q T0628 4 MTARYIAIDWGSTNLRAWLYQG-EECLESRQSE 35 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~ 35 (295)
|.-++|+||=|.+++++-++|- ++++.+.+-+
T Consensus 2 ~g~~~lgi~ig~~~i~~~l~d~~G~il~~~~~~ 34 (128)
T d1z05a3 2 LGWQFLSMRLGRGYLTIALHELGGEVLIDTKID 34 (128)
T ss_dssp TTEEEEEEEEETTEEEEEEEETTSCEEEEEEEE
T ss_pred CCCEEEEEEECCCEEEEEEECCCCCEEEEEEEC
T ss_conf 888999999899999999995989999999721
No 19
>d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.68 E-value=4.4 Score=17.80 Aligned_cols=19 Identities=32% Similarity=0.571 Sum_probs=16.5
Q ss_pred CCEEEEECCCHHHEEEEEC
Q ss_conf 5447886276314676640
Q T0628 6 ARYIAIDWGSTNLRAWLYQ 24 (295)
Q Consensus 6 ~~~IaiDwGTtnlR~~l~~ 24 (295)
-.|+|+|-|-||||+-+++
T Consensus 63 G~flalDlGGTn~Rv~~V~ 81 (207)
T d1czan1 63 GDFIALDLGGSSFRILRVQ 81 (207)
T ss_dssp EEEEEEEESSSSEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEE
T ss_conf 5589983277558999999
No 20
>d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]}
Probab=55.48 E-value=6.1 Score=16.86 Aligned_cols=96 Identities=9% Similarity=0.127 Sum_probs=51.0
Q ss_pred CCEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCC----CC-----CCEEEECCCCCCCC
Q ss_conf 54478862763146766407-8441200121002215875648999999986217----89-----81899755155124
Q T0628 6 ARYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWRD----GA-----TPVVMAGMVGSNVG 75 (295)
Q Consensus 6 ~~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~~----~~-----~PVi~~GMigS~~G 75 (295)
-++|++|-|.+++++-++|- ++++.+.+-+. ....+...-..+.+.+.+.+. .. +-|-+.|.+-+..|
T Consensus 4 ~~~l~i~i~~~~i~~~l~Dl~G~~l~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~gIgi~~pG~v~~~~~ 81 (129)
T d1z6ra2 4 WHYLSLRISRGEIFLALRDLSSKLVVEESQEL--ALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENG 81 (129)
T ss_dssp CEEEEEEEETTEEEEEEEETTCCEEEEEEEEC--CSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTT
T ss_pred EEEEEEEECCCEEEEEEECCCCCEEEEEEEEC--CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCC
T ss_conf 59999998999999999959999887877402--4554468999999999999985375433303688733112664046
Q ss_pred CC-CCCCCC--CCCCHHHHHHHHHCCCCCEEEE
Q ss_conf 62-378545--7889788635420479866883
Q T0628 76 WK-IAPYLP--LPAAFSDIGQQLTAVGDNIWII 105 (295)
Q Consensus 76 w~-Eapy~~--~Pa~l~~l~~~~~~~~~~v~ii 105 (295)
-. -.|+.+ ....+.+.-.. .++.||.+.
T Consensus 82 ~~~~~~~~~~w~~~~l~~~l~~--~~~~pV~~~ 112 (129)
T d1z6ra2 82 IVHRMPFYEDVKEMPLGEALEQ--HTGVPVYIQ 112 (129)
T ss_dssp EEEECTTCTTCSSBCHHHHHHH--HHSSCEEEE
T ss_pred CEECCCCCHHCCCCCHHHHHHH--HCCCCEEEE
T ss_conf 0304676111058336999998--619989998
No 21
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}
Probab=53.68 E-value=5.8 Score=17.01 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=27.9
Q ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCHH
Q ss_conf 79963899848589999999999809843433879
Q T0628 245 AGQQAISLVAGSSLTSRYQQAFAAIGREVSAVAGD 279 (295)
Q Consensus 245 ~~~~~v~LiG~~~L~~~Y~~AL~~~G~~~~~~d~d 279 (295)
.+...|.++|.+.|.+....|....|+.+...|.+
T Consensus 9 ~~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~ 43 (111)
T d1kjqa2 9 PAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY 43 (111)
T ss_dssp TTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 99979999937798999999999889989998499
No 22
>d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]}
Probab=53.07 E-value=6.7 Score=16.62 Aligned_cols=52 Identities=21% Similarity=0.211 Sum_probs=29.3
Q ss_pred CCEEEEECCCHHHEEEEECC--CCEEEEC-CCCCCHHHCCCCCHHHHHHHHHHHHC
Q ss_conf 54478862763146766407--8441200-12100221587564899999998621
Q T0628 6 ARYIAIDWGSTNLRAWLYQG--EECLESR-QSEAGVTRLNGRSPAAVLAEITQHWR 58 (295)
Q Consensus 6 ~~~IaiDwGTtnlR~~l~~~--~~vl~~~-~~~~Gv~~~~~~~f~~~l~~~~~~~~ 58 (295)
+..|+||-|-|++|+=++|. +.++.++ +.+. -....++.+...+..++..+.
T Consensus 2 ~~vlGiDiGgT~i~~~l~d~~~g~i~~~~~~~~t-~~~~~~~~~~~~i~~~~~~l~ 56 (129)
T d1woqa1 2 APLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPT-PQPATPESVAEAVALVVAELS 56 (129)
T ss_dssp CCEEEEEECSSEEEEEEEETTTTEEEEEEEEEEC-CSSCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCEEEEEEEECCCCEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHHH
T ss_conf 9889999883669999998999989999860142-467789999999999999987
No 23
>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]}
Probab=52.21 E-value=6.9 Score=16.53 Aligned_cols=49 Identities=20% Similarity=0.119 Sum_probs=33.5
Q ss_pred CEEEEECCCHHHEEEEECC-CCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHC
Q ss_conf 4478862763146766407-844120012100221587564899999998621
Q T0628 7 RYIAIDWGSTNLRAWLYQG-EECLESRQSEAGVTRLNGRSPAAVLAEITQHWR 58 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~~-~~vl~~~~~~~Gv~~~~~~~f~~~l~~~~~~~~ 58 (295)
+++++|=|-||.|.=++|. ++.+...+... .-..+.+..++.+++.++.
T Consensus 2 y~L~~DIGGT~ir~glvd~~~~~i~~~~~~~---~~~~~~~~~~i~~~~~~~~ 51 (319)
T d1sz2a1 2 YALVGDVGGTNARLALCDIASGEISQAKTYS---GLDYPSLEAVIRVYLEEHK 51 (319)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEE---GGGCSCHHHHHHHHHHHSC
T ss_pred EEEEEEECHHHEEEEEEECCCCEEEEEEEEC---CCCHHHHHHHHHHHHHHCC
T ss_conf 7999998811144379999999897888768---9987579999999998638
No 24
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}
Probab=47.51 E-value=7.4 Score=16.34 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=27.4
Q ss_pred EEEEECCHHHHHHHHHHHHHCCCCEEECCHHH
Q ss_conf 38998485899999999998098434338799
Q T0628 249 AISLVAGSSLTSRYQQAFAAIGREVSAVAGDT 280 (295)
Q Consensus 249 ~v~LiG~~~L~~~Y~~AL~~~G~~~~~~d~d~ 280 (295)
.|.++|++.|.+.-..|-...|+.+..+|.+.
T Consensus 3 ~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~ 34 (78)
T d3etja2 3 QVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDA 34 (78)
T ss_dssp EEEEEBCSHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 89997487899999999998699799986999
No 25
>d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.97 E-value=8.9 Score=15.81 Aligned_cols=19 Identities=32% Similarity=0.693 Sum_probs=16.2
Q ss_pred CCEEEEECCCHHHEEEEEC
Q ss_conf 5447886276314676640
Q T0628 6 ARYIAIDWGSTNLRAWLYQ 24 (295)
Q Consensus 6 ~~~IaiDwGTtnlR~~l~~ 24 (295)
-.++|+|-|-||||+-+++
T Consensus 59 G~flalDlGGTn~Rv~~V~ 77 (205)
T d1v4sa1 59 GDFLSLDLGGTNFRVMLVK 77 (205)
T ss_dssp EEEEEEEESSSEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEE
T ss_conf 4478871378669999999
No 26
>d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]}
Probab=42.14 E-value=9.2 Score=15.75 Aligned_cols=27 Identities=22% Similarity=0.135 Sum_probs=16.9
Q ss_pred EEEECCCHHHEEEEECCCCEEEECCCC
Q ss_conf 788627631467664078441200121
Q T0628 9 IAIDWGSTNLRAWLYQGEECLESRQSE 35 (295)
Q Consensus 9 IaiDwGTtnlR~~l~~~~~vl~~~~~~ 35 (295)
+.+|-|-|.+|+-+.|+++++.+.++.
T Consensus 3 livDgGgTKT~~vl~d~g~~i~~~~t~ 29 (107)
T d1zbsa2 3 LIGDSGSTKTDWCIAKEGKSLGRFQTS 29 (107)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEE
T ss_pred EEEEECCCCEEEEEECCCCEEEEEECC
T ss_conf 999954113899998799768999627
No 27
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}
Probab=41.22 E-value=10 Score=15.45 Aligned_cols=30 Identities=10% Similarity=0.202 Sum_probs=16.7
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECC
Q ss_conf 98189975515512462378545788978863542047986688354
Q T0628 61 ATPVVMAGMVGSNVGWKIAPYLPLPAAFSDIGQQLTAVGDNIWIIPG 107 (295)
Q Consensus 61 ~~PVi~~GMigS~~Gw~Eapy~~~Pa~l~~l~~~~~~~~~~v~iiPG 107 (295)
.+-||=+|.+|.. ++..+...+.+|+++=.
T Consensus 37 ~v~VIGgG~iG~E-----------------~A~~l~~~g~~Vtvie~ 66 (133)
T d1q1ra2 37 RLVVIGGGYIGLE-----------------VAATAIKANMHVTLLDT 66 (133)
T ss_dssp EEEEECCSHHHHH-----------------HHHHHHHTTCEEEEECS
T ss_pred EEEEECCCHHHHH-----------------HHHHHHHHCCCEEEEEE
T ss_conf 8999998337899-----------------98998762721036420
No 28
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=41.00 E-value=10 Score=15.42 Aligned_cols=15 Identities=7% Similarity=0.217 Sum_probs=7.8
Q ss_pred HHHHHCCCCCEEEEC
Q ss_conf 354204798668835
Q T0628 92 GQQLTAVGDNIWIIP 106 (295)
Q Consensus 92 ~~~~~~~~~~v~iiP 106 (295)
+..+...+.+|.+|-
T Consensus 46 A~~l~~~g~~Vtli~ 60 (121)
T d1d7ya2 46 AATARTAGVHVSLVE 60 (121)
T ss_dssp HHHHHHTTCEEEEEE
T ss_pred HHHHHCCCCEEEEEE
T ss_conf 888606661699996
No 29
>d1nu0a_ c.55.3.8 (A:) Hypothetical protein YqgF (RuvX) {Escherichia coli [TaxId: 562]}
Probab=38.16 E-value=11 Score=15.14 Aligned_cols=66 Identities=14% Similarity=0.279 Sum_probs=41.9
Q ss_pred CCCCEEEEECCCHHHEEEEECCCCEEEECCCCCCHHHCC-CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCC
Q ss_conf 675447886276314676640784412001210022158-756489999999862178981899755155124
Q T0628 4 MTARYIAIDWGSTNLRAWLYQGEECLESRQSEAGVTRLN-GRSPAAVLAEITQHWRDGATPVVMAGMVGSNVG 75 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~~~vl~~~~~~~Gv~~~~-~~~f~~~l~~~~~~~~~~~~PVi~~GMigS~~G 75 (295)
|+-.++++|.|+-+.=+-.-|..+.++ ++.++.... ....-..+..++.+|.. -.++.|+.-.-.|
T Consensus 1 m~griLgiD~G~kriGvAvsd~~~~~a---~pl~~i~~~~~~~~~~~l~~i~~e~~~---~~iVvG~P~~~~g 67 (138)
T d1nu0a_ 1 MSGTLMAFDFGTKSIGVAVGQRITGTA---RPLPAIKAQDGTPDWNIIERLLKEWQP---DEIIVGLPLNMDG 67 (138)
T ss_dssp CCCEEEEEECCSSEEEEEEEETTTTEE---EEEEEEEEETTEECHHHHHHHHHHHCC---SEEEEEEEECTTS
T ss_pred CCCCEEEEEECCCEEEEEEECCCCCCC---CCCEEEECCCCHHHHHHHHHHHHCCCC---CEEEEECCCCCCC
T ss_conf 997489999389989999937987742---542555503640569999987540476---3899614322355
No 30
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}
Probab=29.95 E-value=15 Score=14.29 Aligned_cols=29 Identities=17% Similarity=0.435 Sum_probs=16.3
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEC
Q ss_conf 9818997551551246237854578897886354204798668835
Q T0628 61 ATPVVMAGMVGSNVGWKIAPYLPLPAAFSDIGQQLTAVGDNIWIIP 106 (295)
Q Consensus 61 ~~PVi~~GMigS~~Gw~Eapy~~~Pa~l~~l~~~~~~~~~~v~iiP 106 (295)
.+-|+=.|.+|. +++..+...+.+|.+|-
T Consensus 34 ~vvIiGgG~iG~-----------------E~A~~l~~~g~~Vtlv~ 62 (122)
T d1xhca2 34 EAIIIGGGFIGL-----------------ELAGNLAEAGYHVKLIH 62 (122)
T ss_dssp EEEEEECSHHHH-----------------HHHHHHHHTTCEEEEEC
T ss_pred CEEEECCCHHHH-----------------HHHHHHHCCCCEEEEEE
T ss_conf 499999807899-----------------99998633662488870
No 31
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Probab=29.24 E-value=16 Score=14.22 Aligned_cols=56 Identities=7% Similarity=0.192 Sum_probs=31.6
Q ss_pred HHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHC--CCCCEEEECCCCCEEEEEECC
Q ss_conf 635420479866883541007888876522269999998723--889789844887216886288
Q T0628 91 IGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARAL--APSSVYVMPGTHCKWVLADRR 153 (295)
Q Consensus 91 l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~--~~~~~icLPGTHsKWv~v~~g 153 (295)
++..+...+.+|.++-- ...++++++-++...+.. ...++-.+.|++-+=+..+++
T Consensus 37 ~A~~l~~~G~~Vtiv~~-------~~~ll~~~d~ei~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~ 94 (119)
T d3lada2 37 LGSVWARLGAEVTVLEA-------MDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNK 94 (119)
T ss_dssp HHHHHHHTTCEEEEEES-------SSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSS
T ss_pred HHHHHHHCCCCEEEEEE-------ECCCCCCCCCHHHHHHHHHHHHCCCEEECCCEEEEEEEECC
T ss_conf 99999976993578876-------02247753100379999998755915104868999999099
No 32
>d1vhxa_ c.55.3.8 (A:) Hypothetical protein YrrK (RuvX) {Bacillus subtilis [TaxId: 1423]}
Probab=28.27 E-value=16 Score=14.11 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=36.9
Q ss_pred CEEEEECCCHHHEEEEECCCCEEEECCCCCCHHH---CCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC
Q ss_conf 4478862763146766407844120012100221---5875648999999986217898189975515512
Q T0628 7 RYIAIDWGSTNLRAWLYQGEECLESRQSEAGVTR---LNGRSPAAVLAEITQHWRDGATPVVMAGMVGSNV 74 (295)
Q Consensus 7 ~~IaiDwGTtnlR~~l~~~~~vl~~~~~~~Gv~~---~~~~~f~~~l~~~~~~~~~~~~PVi~~GMigS~~ 74 (295)
+++++|+|+.+.=+-+-|..+.+.. +.++.. ...+..-..|..++.+|. +-.++-|+.-...
T Consensus 3 riLgiD~G~kriGvAisd~~~~~a~---pl~~i~~~~~~~~~~~~~l~~ii~e~~---i~~iViGlP~~~d 67 (140)
T d1vhxa_ 3 RILGLDLGTKTLGVALSDEMGWTAQ---GIETIKINEAEGDYGLSRLSELIKDYT---IDKIVLGFPKNMN 67 (140)
T ss_dssp EEEEEEECSSEEEEEEECTTSSSEE---EEEEEECBGGGTBCCHHHHHHHHTTSE---EEEEEEECCCCBT
T ss_pred EEEEEEECCCEEEEEEECCCCCCCC---CEEEEEECCCCCCHHHHHHHHHHHHHC---CCEEEEECCCCCC
T ss_conf 1999982799899999459988225---516686125664168999999998516---5659983552247
No 33
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]}
Probab=26.53 E-value=18 Score=13.91 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=20.7
Q ss_pred CCCCEEEEECCCHHHEEEEECCC-CEEEE
Q ss_conf 67544788627631467664078-44120
Q T0628 4 MTARYIAIDWGSTNLRAWLYQGE-ECLES 31 (295)
Q Consensus 4 m~~~~IaiDwGTtnlR~~l~~~~-~vl~~ 31 (295)
|+ |+||-|.|+.++=++|.+ +++++
T Consensus 1 Mk---iGIDiGGT~ik~~lvd~~g~i~~~ 26 (267)
T d2ewsa1 1 MK---VGIDAGGTLIKIVQEQDNQRTFKT 26 (267)
T ss_dssp CE---EEEEECSSEEEEEEECSSCEEEEE
T ss_pred CE---EEEEECHHHEEEEEEECCCCEEEE
T ss_conf 98---999977203888999289968999
No 34
>d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]}
Probab=25.01 E-value=15 Score=14.41 Aligned_cols=39 Identities=3% Similarity=-0.068 Sum_probs=25.2
Q ss_pred CCCCCEEEECCCCCCCCCCCC--------CCCC-----CCCCHHHHHHHHHC
Q ss_conf 789818997551551246237--------8545-----78897886354204
Q T0628 59 DGATPVVMAGMVGSNVGWKIA--------PYLP-----LPAAFSDIGQQLTA 97 (295)
Q Consensus 59 ~~~~PVi~~GMigS~~Gw~Ea--------py~~-----~Pa~l~~l~~~~~~ 97 (295)
+..+++++|++-..+.|..+. ++.. ...++.+|...+..
T Consensus 70 ~~gv~l~vC~~~a~~RGi~~~~~~~~~~~~~~~l~~gf~i~gl~~L~e~~~~ 121 (128)
T d2d1pa1 70 QHGVALNICVAAALRRGVVDETEAGRLGLASSNLQQGFTLSGLGALAEASLT 121 (128)
T ss_dssp HHCCEEEEEHHHHHHTTCCCHHHHHHHTCSCCCBCTTEEEECTHHHHHHHHH
T ss_pred HCCCEEEEEHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHH
T ss_conf 6698399738999885998415577753431135677486289999999997
No 35
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=22.71 E-value=21 Score=13.45 Aligned_cols=17 Identities=24% Similarity=0.569 Sum_probs=10.1
Q ss_pred HHHHHHHHCCCCEEECC
Q ss_conf 99999998098434338
Q T0628 261 RYQQAFAAIGREVSAVA 277 (295)
Q Consensus 261 ~Y~~AL~~~G~~~~~~d 277 (295)
.|...|..+|.....-+
T Consensus 102 ~~~~~l~~~G~d~vi~p 118 (132)
T d1lssa_ 102 EYKDVFERLGVDVVVSP 118 (132)
T ss_dssp THHHHHHHTTCSEEECH
T ss_pred HHHHHHHHCCCCEEECH
T ss_conf 78999997799999998
No 36
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.51 E-value=21 Score=13.43 Aligned_cols=54 Identities=7% Similarity=0.083 Sum_probs=30.4
Q ss_pred HHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHC--CCCCEEEECCCCCEEE-EEEC
Q ss_conf 635420479866883541007888876522269999998723--8897898448872168-8628
Q T0628 91 IGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARAL--APSSVYVMPGTHCKWV-LADR 152 (295)
Q Consensus 91 l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~--~~~~~icLPGTHsKWv-~v~~ 152 (295)
++..+.+.+.+|.+|= . ..++|++.-++.-.+.. ...++=.+++++-+=+ ..++
T Consensus 35 ~A~~l~~lG~~Vtii~--~------~~~l~~~D~~~~~~l~~~l~~~Gv~i~~~~~v~~~~~~~~ 91 (122)
T d1h6va2 35 CAGFLAGIGLDVTVMV--R------SILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEA 91 (122)
T ss_dssp HHHHHHHTTCCEEEEE--S------SSSSTTSCHHHHHHHHHHHHHTTEEEEESCEEEEEEEEEC
T ss_pred HHHHHHHCCCEEEEEE--E------CHHHCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEEEECC
T ss_conf 9999861297699997--2------0242248999999999999977999998998999999438
No 37
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}
Probab=21.27 E-value=22 Score=13.27 Aligned_cols=58 Identities=7% Similarity=0.141 Sum_probs=28.2
Q ss_pred HHHHHHCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHC--CCCCEEEECCC----------CCEEEEEECCEE
Q ss_conf 635420479866883541007888876522269999998723--88978984488----------721688628868
Q T0628 91 IGQQLTAVGDNIWIIPGLCVSRDDNHNVMRGEETQLLGARAL--APSSVYVMPGT----------HCKWVLADRRQI 155 (295)
Q Consensus 91 l~~~~~~~~~~v~iiPGl~~~~~~~~DVMRGEEtqi~G~l~~--~~~~~icLPGT----------HsKWv~v~~g~I 155 (295)
++..+...+.+|+++=- ...+||+.+-++.-.+.. ...++-++.++ .++.+..++|+.
T Consensus 37 ~A~~l~~~g~~Vtlv~~-------~~~il~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~v~~~~G~~ 106 (117)
T d1onfa2 37 LINVIKRLGIDSYIFAR-------GNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRI 106 (117)
T ss_dssp HHHHHHTTTCEEEEECS-------SSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCE
T ss_pred HHHHHHHCCCCCEEEEH-------HCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCEEEEEECCCCE
T ss_conf 99999860655311101-------00213466699999999999867989997998999998699859999899999
No 38
>d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.23 E-value=22 Score=13.26 Aligned_cols=23 Identities=35% Similarity=0.442 Sum_probs=18.1
Q ss_pred EECC--CCCEEEEEE-CCEEEEEECC
Q ss_conf 8448--872168862-8868886302
Q T0628 139 VMPG--THCKWVLAD-RRQIHDFRTV 161 (295)
Q Consensus 139 cLPG--THsKWv~v~-~g~I~~f~T~ 161 (295)
.=|| |-+|||.++ +|++..+.++
T Consensus 10 ~DPg~r~gck~AvlD~~G~vld~~vi 35 (149)
T d3bzka5 10 LDPGLRTGVKVAVVDATGKLLDTATV 35 (149)
T ss_dssp EECCSTTCEEEEEECTTSCEEEEEEE
T ss_pred ECCCCCCCCEEEEECCCCCEEEEEEE
T ss_conf 78886566189999799998999998
Done!