Query T0630 NP_001128980.1, , 132 residues
Match_columns 132
No_of_seqs 106 out of 428
Neff 7.3
Searched_HMMs 15564
Date Thu Jul 22 14:58:48 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0630.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0630.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2evra2 d.3.1.16 (A:87-234) Ce 97.9 1.4E-05 9.3E-10 52.5 6.0 38 3-40 69-107 (148)
2 d2if6a1 d.3.1.21 (A:19-200) Hy 97.1 0.00036 2.3E-08 43.9 4.8 93 7-120 2-117 (182)
3 d1vrba1 b.82.2.11 (A:8-326) Pu 88.2 0.28 1.8E-05 26.1 3.9 29 7-36 202-230 (319)
4 d2io8a2 d.3.1.15 (A:10-200) Gl 80.9 0.91 5.8E-05 22.9 3.7 31 3-33 98-134 (191)
5 d2im9a1 d.3.1.13 (A:49-352) Hy 66.2 1.6 0.0001 21.4 2.0 32 6-37 214-257 (305)
6 d2phla2 b.82.1.2 (A:220-381) S 65.5 3.1 0.0002 19.6 3.4 31 6-37 73-103 (162)
7 g1dgw.1 b.82.1.2 (X:,Y:) Seed 54.6 7.2 0.00046 17.4 3.7 28 7-35 84-111 (168)
8 d1h2ka_ b.82.2.6 (A:) Hypoxia- 52.9 6.1 0.00039 17.8 3.1 23 7-30 250-272 (335)
9 d1uika2 b.82.1.2 (A:351-535) S 52.7 7.8 0.0005 17.2 3.7 30 6-36 102-131 (185)
10 d1o9ya_ b.139.1.1 (A:) Structu 51.7 8.1 0.00052 17.1 3.8 28 6-33 24-51 (71)
11 d1o6aa_ b.139.1.1 (A:) Putativ 49.9 6.9 0.00044 17.5 3.0 30 6-35 29-58 (87)
12 d1o6aa_ b.139.1.1 (A:) Putativ 48.7 7.4 0.00047 17.3 3.0 29 6-34 29-57 (87)
13 d1zrra1 b.82.1.6 (A:1-179) Aci 46.8 3.9 0.00025 19.0 1.3 17 7-24 125-141 (179)
14 d1vr3a1 b.82.1.6 (A:1-179) Aci 44.5 4.8 0.00031 18.4 1.5 17 8-25 119-135 (179)
15 d1wpga1 b.82.7.1 (A:125-239) C 35.6 7.8 0.0005 17.2 1.4 19 2-20 15-33 (115)
16 d1wpga1 b.82.7.1 (A:125-239) C 34.4 8.3 0.00053 17.0 1.4 19 2-20 15-33 (115)
17 d1knwa1 b.49.2.3 (A:2-31,A:279 32.5 12 0.0008 15.9 2.0 15 6-20 114-128 (174)
18 d1uika1 b.82.1.2 (A:148-350) S 30.3 17 0.0011 15.0 2.4 25 7-32 85-109 (203)
19 d1uija1 b.82.1.2 (A:6-175) See 27.0 20 0.0013 14.6 2.7 25 7-32 89-113 (170)
20 d2et1a1 b.82.1.2 (A:1-201) Ger 26.5 20 0.0013 14.6 3.6 30 6-36 121-150 (201)
21 d1fxza2 b.82.1.2 (A:297-470) S 25.5 21 0.0014 14.5 3.4 25 6-31 89-113 (174)
22 d1od5a2 b.82.1.2 (A:321-493) S 25.0 22 0.0014 14.4 2.9 21 6-27 94-114 (173)
23 d1dzfa2 d.78.1.1 (A:144-215) E 20.8 25 0.0016 14.0 1.8 13 7-19 46-58 (72)
No 1
>d2evra2 d.3.1.16 (A:87-234) Cell wall-associated hydrolase Spr C-terminal domain {Nostoc punctiforme [TaxId: 272131]}
Probab=97.87 E-value=1.4e-05 Score=52.54 Aligned_cols=38 Identities=29% Similarity=0.435 Sum_probs=31.0
Q ss_pred CCCCCCCCCCEEEEECC-CEEEEEEEECCCEEEEEECCC
Q ss_conf 88100577867987269-755899987791799852676
Q T0630 3 APIPEPKPGDLIEIFRP-FYRHWAIYVGDGYVVHLAPPS 40 (132)
Q Consensus 3 ~~~~~~k~GDlI~~~r~-~y~H~GIYvGdg~ViH~~~~~ 40 (132)
++..+++|||||.|.-. ...|.|||+|+|++||..+..
T Consensus 69 V~~~~l~pGDLvFf~~~~~~~HVgIyiG~g~~iha~~~~ 107 (148)
T d2evra2 69 ITIAELVAGDLVFFGTSQKATHVGLYLADGYYIHSSGKD 107 (148)
T ss_dssp ECGGGCCTTCEEEEECSSCEEEEEEECSTTEEEEEECTT
T ss_pred CCCCCCCCCEEEEECCCCCCCEEEEEECCCEEEEECCCC
T ss_conf 531135764067756999998858993699899967887
No 2
>d2if6a1 d.3.1.21 (A:19-200) Hypothetical protein YiiX {Escherichia coli [TaxId: 562]}
Probab=97.08 E-value=0.00036 Score=43.88 Aligned_cols=93 Identities=23% Similarity=0.270 Sum_probs=50.0
Q ss_pred CCCCCCEEEEECC-------------CEEEEEEEECCC-EEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCC
Q ss_conf 0577867987269-------------755899987791-79985267664346611331002678525787723353588
Q T0630 7 EPKPGDLIEIFRP-------------FYRHWAIYVGDG-YVVHLAPPSEVAGAGAASVMSALTDKAIVKKELLYDVAGSD 72 (132)
Q Consensus 7 ~~k~GDlI~~~r~-------------~y~H~GIYvGdg-~ViH~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~ 72 (132)
+||+||+|.+... .|+|.||+++.+ .+++.... ..|...+|.+|....
T Consensus 2 q~q~GDIlf~~~~s~~s~aI~~~T~s~~sHvgIv~~~~~~~~v~~a~------------------~~V~~~~l~~f~~~~ 63 (182)
T d2if6a1 2 QPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPYVFEAV------------------GPVKYTPLKQWIAHG 63 (182)
T ss_dssp CCCTTCEEEECCCSTTHHHHHHHHTSSCCEEEEEEEETTEEEEEEES------------------SSEEEEEHHHHHHTS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEC------------------CCEEEEECHHHHHHC
T ss_conf 98883589996798579999998289982599999759908997502------------------307986506756406
Q ss_pred ---CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE------CCHHHHHHHH
Q ss_conf ---27984343765378898999999999706887720434------2858999988
Q T0630 73 ---KYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTS------ENCEHFVNEL 120 (132)
Q Consensus 73 ---~~~v~n~~d~~~~~~~~~~iv~rA~~~lg~~~~Y~l~~------nNCEHFa~~c 120 (132)
.+.|.... ....+...+.+++.|++++|. +||+.. .=|=.|+..+
T Consensus 64 ~~~~~~v~R~~-~~~~~~~~~~~~~~a~~~lGk--pYd~~f~~~~~~~yCSelV~~a 117 (182)
T d2if6a1 64 EKGKYVVRRVE-GGLSVEQQQKLAQTAKRYLGK--PYDFSFSWSDDRQYCSEVVWKV 117 (182)
T ss_dssp GGGCEEEEEET-TCCCHHHHHHHHHHHGGGTTC--CBCTTCCSSSSSBCHHHHHHHH
T ss_pred CCCCEEEEEEC-CCCCHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCEEHHHHHHHH
T ss_conf 77778999816-888989999999999996599--8744544777737779999999
No 3
>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]}
Probab=88.18 E-value=0.28 Score=26.05 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=22.3
Q ss_pred CCCCCCEEEEECCCEEEEEEEECCCEEEEE
Q ss_conf 057786798726975589998779179985
Q T0630 7 EPKPGDLIEIFRPFYRHWAIYVGDGYVVHL 36 (132)
Q Consensus 7 ~~k~GDlI~~~r~~y~H~GIYvGdg~ViH~ 36 (132)
.++|||+|++|++.| |++.-.++.--+++
T Consensus 202 ~L~pGDvLYiP~gw~-H~v~s~~~sis~sv 230 (319)
T d1vrba1 202 NLTPGTMLYLPRGLW-HSTKSDQATLALNI 230 (319)
T ss_dssp EECTTCEEEECTTCE-EEEECSSCEEEEEE
T ss_pred EECCCCEEEECCCCE-EEEEECCCEEEEEE
T ss_conf 977987898279954-88575587279999
No 4
>d2io8a2 d.3.1.15 (A:10-200) Glutathionylspermidine synthase, amidase domain {Escherichia coli [TaxId: 562]}
Probab=80.86 E-value=0.91 Score=22.93 Aligned_cols=31 Identities=23% Similarity=0.119 Sum_probs=22.8
Q ss_pred CCCCCCCCCCEEEEECC----CEEEEEEEE--CCCEE
Q ss_conf 88100577867987269----755899987--79179
Q T0630 3 APIPEPKPGDLIEIFRP----FYRHWAIYV--GDGYV 33 (132)
Q Consensus 3 ~~~~~~k~GDlI~~~r~----~y~H~GIYv--Gdg~V 33 (132)
.+...|++||||-++++ .|-|.||.+ ++++|
T Consensus 98 g~~~~P~~Gdllv~~~~~~~~~~GHVavV~~v~~~~v 134 (191)
T d2io8a2 98 GSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKV 134 (191)
T ss_dssp TCSSCCCTTCEEEECSBTTBTTTCEEEEEEEECSSEE
T ss_pred CCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCEE
T ss_conf 9878999873999778888997106999998579989
No 5
>d2im9a1 d.3.1.13 (A:49-352) Hypothetical protein Lpg0564 {Legionella pneumophila [TaxId: 446]}
Probab=66.20 E-value=1.6 Score=21.44 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=22.9
Q ss_pred CCCCCCCEEEEECC------------CEEEEEEEECCCEEEEEE
Q ss_conf 00577867987269------------755899987791799852
Q T0630 6 PEPKPGDLIEIFRP------------FYRHWAIYVGDGYVVHLA 37 (132)
Q Consensus 6 ~~~k~GDlI~~~r~------------~y~H~GIYvGdg~ViH~~ 37 (132)
+.++.||+|.+-+. -.+|.||.+-.+.-+||-
T Consensus 214 ~~L~~GDiIai~t~~~~l~~~~~~GLDVtHvGi~i~~~~~l~l~ 257 (305)
T d2im9a1 214 SQIPNGAVIEIIRPNWDLRQQIGTELDISHLGFAIWINNELFFR 257 (305)
T ss_dssp TTSCTTCEEEEEEEEECCHHHHSSCEEEEEEEEEEEETTEEEEE
T ss_pred HCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCEEEEE
T ss_conf 41899778999926863222356898235578999979927999
No 6
>d2phla2 b.82.1.2 (A:220-381) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]}
Probab=65.46 E-value=3.1 Score=19.60 Aligned_cols=31 Identities=13% Similarity=0.024 Sum_probs=23.0
Q ss_pred CCCCCCCEEEEECCCEEEEEEEECCCEEEEEE
Q ss_conf 00577867987269755899987791799852
Q T0630 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLA 37 (132)
Q Consensus 6 ~~~k~GDlI~~~r~~y~H~GIYvGdg~ViH~~ 37 (132)
.++++||++.||++ +.||-+-.|+.+.+.+.
T Consensus 73 ~~l~~Gdv~vvP~G-~~~~~~n~~~~~~v~~~ 103 (162)
T d2phla2 73 AELSKDDVFVIPAA-YPVAIKATSNVNFTGFG 103 (162)
T ss_dssp EEEETTCEEEECTT-CCEEEEESSSEEEEEEE
T ss_pred EEECCCCEEEECCC-CEEEEEECCCCEEEEEE
T ss_conf 63059858998999-88999938995499999
No 7
>g1dgw.1 b.82.1.2 (X:,Y:) Seed storage 7S protein {Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId: 3823]}
Probab=54.61 E-value=7.2 Score=17.38 Aligned_cols=28 Identities=25% Similarity=0.143 Sum_probs=20.1
Q ss_pred CCCCCCEEEEECCCEEEEEEEECCCEEEE
Q ss_conf 05778679872697558999877917998
Q T0630 7 EPKPGDLIEIFRPFYRHWAIYVGDGYVVH 35 (132)
Q Consensus 7 ~~k~GDlI~~~r~~y~H~GIYvGdg~ViH 35 (132)
++++||++.+|++. .||-+=.|+...+-
T Consensus 84 ~l~~Gdv~~iP~G~-~~~~~n~~~~~~~~ 111 (168)
T g1dgw.1 84 TLSEGDIIVIPSSF-PVALKAASDLNMVG 111 (168)
T ss_dssp EECTTCEEEECTTC-CEEEEESSSEEEEE
T ss_pred EECCCCEEEECCCC-EEEEECCCCCEEEE
T ss_conf 73798699998998-89998089960899
No 8
>d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.94 E-value=6.1 Score=17.80 Aligned_cols=23 Identities=22% Similarity=0.270 Sum_probs=16.0
Q ss_pred CCCCCCEEEEECCCEEEEEEEECC
Q ss_conf 057786798726975589998779
Q T0630 7 EPKPGDLIEIFRPFYRHWAIYVGD 30 (132)
Q Consensus 7 ~~k~GDlI~~~r~~y~H~GIYvGd 30 (132)
.++|||+|++|.+.+ |+..-+.+
T Consensus 250 ~l~pGd~L~iP~~w~-H~V~~~~~ 272 (335)
T d1h2ka_ 250 VVGPGDVLYIPMYWW-HHIESLLN 272 (335)
T ss_dssp EECTTCEEEECTTCE-EEEEECTT
T ss_pred EECCCCEEEECCCCE-EEEEECCC
T ss_conf 988998786279970-89997589
No 9
>d1uika2 b.82.1.2 (A:351-535) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]}
Probab=52.70 E-value=7.8 Score=17.17 Aligned_cols=30 Identities=17% Similarity=0.035 Sum_probs=21.5
Q ss_pred CCCCCCCEEEEECCCEEEEEEEECCCEEEEE
Q ss_conf 0057786798726975589998779179985
Q T0630 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHL 36 (132)
Q Consensus 6 ~~~k~GDlI~~~r~~y~H~GIYvGdg~ViH~ 36 (132)
-++++||++.||++ +.||-+=-||...+-+
T Consensus 102 ~~l~~GDv~viP~G-~~~~~~n~~d~~~v~~ 131 (185)
T d1uika2 102 AELSEQDIFVIPAG-YPVVVNATSDLNFFAF 131 (185)
T ss_dssp EEECTTCEEEECTT-CCEEEEESSSEEEEEE
T ss_pred EEECCCCEEEECCC-CEEEEECCCCCCEEEE
T ss_conf 88648868998899-7899981899308999
No 10
>d1o9ya_ b.139.1.1 (A:) Structural protein HrcQ2, C-terminal domain {Pseudomonas syringae [TaxId: 317]}
Probab=51.70 E-value=8.1 Score=17.07 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=23.3
Q ss_pred CCCCCCCEEEEECCCEEEEEEEECCCEE
Q ss_conf 0057786798726975589998779179
Q T0630 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYV 33 (132)
Q Consensus 6 ~~~k~GDlI~~~r~~y~H~GIYvGdg~V 33 (132)
-++++||+|.+++..-.+.=+|+|+--+
T Consensus 24 ~~L~~G~vl~l~~~~~~~V~l~v~g~~i 51 (71)
T d1o9ya_ 24 RRLDAGTILEVTGISPGHATLCHGEQVV 51 (71)
T ss_dssp HTCCTTCEEEECSSCTTEEEEEETTEEE
T ss_pred HCCCCCCEEEECCCCCCCEEEEECCEEE
T ss_conf 5358999999187789979999998899
No 11
>d1o6aa_ b.139.1.1 (A:) Putative flagelar motor switch protein FliN {Thermotoga maritima [TaxId: 2336]} SCOP: d1yaba1 d1o6ab_ d1o9yd_ d1o9yc_ d1o9ya_
Probab=49.87 E-value=6.9 Score=17.49 Aligned_cols=30 Identities=20% Similarity=0.143 Sum_probs=24.6
Q ss_pred CCCCCCCEEEEECCCEEEEEEEECCCEEEE
Q ss_conf 005778679872697558999877917998
Q T0630 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVH 35 (132)
Q Consensus 6 ~~~k~GDlI~~~r~~y~H~GIYvGdg~ViH 35 (132)
-++++||.|.++...-.+.-|++++-.+.+
T Consensus 29 ~~L~~Gdvi~l~~~~~~~v~l~v~g~~~~~ 58 (87)
T d1o6aa_ 29 LEMIHGSIIELDKLTGEPVDILVNGKLIAR 58 (87)
T ss_dssp HHCCTTCEEEEEEETTCCEEEEETTEEEEE
T ss_pred HCCCCCCEEECCCCCCCCEEEEECCEEEEE
T ss_conf 445999788837899993289989979888
No 12
>d1o6aa_ b.139.1.1 (A:) Putative flagelar motor switch protein FliN {Thermotoga maritima [TaxId: 2336]}
Probab=48.74 E-value=7.4 Score=17.32 Aligned_cols=29 Identities=21% Similarity=0.141 Sum_probs=23.8
Q ss_pred CCCCCCCEEEEECCCEEEEEEEECCCEEE
Q ss_conf 00577867987269755899987791799
Q T0630 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVV 34 (132)
Q Consensus 6 ~~~k~GDlI~~~r~~y~H~GIYvGdg~Vi 34 (132)
-.+++||+|.++...-.+.-||+|+-.+.
T Consensus 29 ~~L~~Gdvi~L~~~~~~~v~l~v~g~~~~ 57 (87)
T d1o6aa_ 29 LEMIHGSIIELDKLTGEPVDILVNGKLIA 57 (87)
T ss_dssp HHCCTTCEEEEEEETTCCEEEEETTEEEE
T ss_pred HCCCCCCEEEECCCCCCCEEEEECCEEEE
T ss_conf 57999999991898999799999999999
No 13
>d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=46.85 E-value=3.9 Score=19.02 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=11.2
Q ss_pred CCCCCCEEEEECCCEEEE
Q ss_conf 057786798726975589
Q T0630 7 EPKPGDLIEIFRPFYRHW 24 (132)
Q Consensus 7 ~~k~GDlI~~~r~~y~H~ 24 (132)
++++||+|.+|.+.+ ||
T Consensus 125 ~~~~GDli~vPag~~-H~ 141 (179)
T d1zrra1 125 LCEKNDLISVPAHTP-HW 141 (179)
T ss_dssp ECCCSCEEEECTTCC-BC
T ss_pred EECCCCEEEECCCCE-EC
T ss_conf 974898899699996-81
No 14
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=44.50 E-value=4.8 Score=18.43 Aligned_cols=17 Identities=29% Similarity=0.470 Sum_probs=11.2
Q ss_pred CCCCCEEEEECCCEEEEE
Q ss_conf 577867987269755899
Q T0630 8 PKPGDLIEIFRPFYRHWA 25 (132)
Q Consensus 8 ~k~GDlI~~~r~~y~H~G 25 (132)
.++||+|.+|-+.| ||-
T Consensus 119 ~~~GDli~iPag~~-HwF 135 (179)
T d1vr3a1 119 MEKGDMITLPAGIY-HRF 135 (179)
T ss_dssp EETTEEEEECTTCC-EEE
T ss_pred EECCCEEEECCCCC-EEC
T ss_conf 83798899699952-802
No 15
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=35.58 E-value=7.8 Score=17.18 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=15.5
Q ss_pred CCCCCCCCCCCEEEEECCC
Q ss_conf 8881005778679872697
Q T0630 2 RAPIPEPKPGDLIEIFRPF 20 (132)
Q Consensus 2 ~~~~~~~k~GDlI~~~r~~ 20 (132)
+.|..++-|||+|.+.-+-
T Consensus 15 ~I~~~eLv~GDiv~l~~G~ 33 (115)
T d1wpga1 15 RIKARDIVPGDIVEVAVGD 33 (115)
T ss_dssp EEEGGGCCTTCEEEEETTC
T ss_pred EEEHHHCCCCCEEEECCCC
T ss_conf 9869998899899999999
No 16
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=34.40 E-value=8.3 Score=16.99 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=15.5
Q ss_pred CCCCCCCCCCCEEEEECCC
Q ss_conf 8881005778679872697
Q T0630 2 RAPIPEPKPGDLIEIFRPF 20 (132)
Q Consensus 2 ~~~~~~~k~GDlI~~~r~~ 20 (132)
+.|..++.|||+|.+.-+-
T Consensus 15 ~I~~~~Lv~GDii~i~~G~ 33 (115)
T d1wpga1 15 RIKARDIVPGDIVEVAVGD 33 (115)
T ss_dssp EEEGGGCCTTCEEEEETTC
T ss_pred EEEHHHCCCCCEEEECCCC
T ss_conf 9617783447789977898
No 17
>d1knwa1 b.49.2.3 (A:2-31,A:279-422) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]}
Probab=32.47 E-value=12 Score=15.92 Aligned_cols=15 Identities=33% Similarity=0.499 Sum_probs=9.1
Q ss_pred CCCCCCCEEEEECCC
Q ss_conf 005778679872697
Q T0630 6 PEPKPGDLIEIFRPF 20 (132)
Q Consensus 6 ~~~k~GDlI~~~r~~ 20 (132)
|++++||+|.|...+
T Consensus 114 p~l~~GD~l~i~~~G 128 (174)
T d1knwa1 114 PEVKAGDYLVLHDTG 128 (174)
T ss_dssp ECCCTTCEEEEESCS
T ss_pred CCCCCCCEEEEECCC
T ss_conf 778999999993151
No 18
>d1uika1 b.82.1.2 (A:148-350) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]}
Probab=30.30 E-value=17 Score=15.04 Aligned_cols=25 Identities=8% Similarity=0.137 Sum_probs=17.7
Q ss_pred CCCCCCEEEEECCCEEEEEEEECCCE
Q ss_conf 05778679872697558999877917
Q T0630 7 EPKPGDLIEIFRPFYRHWAIYVGDGY 32 (132)
Q Consensus 7 ~~k~GDlI~~~r~~y~H~GIYvGdg~ 32 (132)
.+++||++.+|.+. .||-+=.|+++
T Consensus 85 ~l~~GDv~~iP~G~-~~~~~N~~~~e 109 (203)
T d1uika1 85 NLQSGDALRVPAGT-TYYVVNPDNDE 109 (203)
T ss_dssp EEETTEEEEECTTC-EEEEEECCSSC
T ss_pred EECCCCEEEECCCC-EEEEEECCCCC
T ss_conf 84288789988997-69999779996
No 19
>d1uija1 b.82.1.2 (A:6-175) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]}
Probab=27.02 E-value=20 Score=14.63 Aligned_cols=25 Identities=20% Similarity=0.137 Sum_probs=15.5
Q ss_pred CCCCCCEEEEECCCEEEEEEEECCCE
Q ss_conf 05778679872697558999877917
Q T0630 7 EPKPGDLIEIFRPFYRHWAIYVGDGY 32 (132)
Q Consensus 7 ~~k~GDlI~~~r~~y~H~GIYvGdg~ 32 (132)
.+++||++.+|++.. ||-+=.|+++
T Consensus 89 ~l~~GDv~~vP~G~~-h~~~n~~~~~ 113 (170)
T d1uija1 89 NLHPGDAQRIPAGTT-YYLVNPHDHQ 113 (170)
T ss_dssp EECTTEEEEECTTCE-EEEEECCSSC
T ss_pred EECCCCEEEECCCCE-EEEEECCCCC
T ss_conf 832896899899972-8999759997
No 20
>d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=26.51 E-value=20 Score=14.57 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=20.4
Q ss_pred CCCCCCCEEEEECCCEEEEEEEECCCEEEEE
Q ss_conf 0057786798726975589998779179985
Q T0630 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHL 36 (132)
Q Consensus 6 ~~~k~GDlI~~~r~~y~H~GIYvGdg~ViH~ 36 (132)
.++++||++.||++. .||-.=.|+..-+-+
T Consensus 121 ~~l~~GDv~vvP~G~-~H~~~N~g~~~a~~i 150 (201)
T d2et1a1 121 RVVRAGETFVIPRGL-MHFQFNVGKTEAYMV 150 (201)
T ss_dssp EEECTTCEEEECTTC-CEEEEECSSSCEEEE
T ss_pred EEECCCCEEEECCCC-EEEEEECCCCCEEEE
T ss_conf 885599789988997-389997699978999
No 21
>d1fxza2 b.82.1.2 (A:297-470) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]}
Probab=25.52 E-value=21 Score=14.46 Aligned_cols=25 Identities=20% Similarity=0.139 Sum_probs=17.6
Q ss_pred CCCCCCCEEEEECCCEEEEEEEECCC
Q ss_conf 00577867987269755899987791
Q T0630 6 PEPKPGDLIEIFRPFYRHWAIYVGDG 31 (132)
Q Consensus 6 ~~~k~GDlI~~~r~~y~H~GIYvGdg 31 (132)
.++++||++.||++. .||=+=.+++
T Consensus 89 ~~l~~Gdv~vvP~G~-~h~~~n~~~~ 113 (174)
T d1fxza2 89 GELQEGRVLIVPQNF-VVAARSQSDN 113 (174)
T ss_dssp EEEETTCEEEECTTC-EEEEEECSTT
T ss_pred EEECCCCEEEECCCC-EEEEEECCCC
T ss_conf 997288499998998-8999937998
No 22
>d1od5a2 b.82.1.2 (A:321-493) Seed storage 7S protein {Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]}
Probab=24.98 E-value=22 Score=14.40 Aligned_cols=21 Identities=19% Similarity=0.132 Sum_probs=13.7
Q ss_pred CCCCCCCEEEEECCCEEEEEEE
Q ss_conf 0057786798726975589998
Q T0630 6 PEPKPGDLIEIFRPFYRHWAIY 27 (132)
Q Consensus 6 ~~~k~GDlI~~~r~~y~H~GIY 27 (132)
.++++||++.||++.. ||-+=
T Consensus 94 ~~l~~Gdv~~iP~G~~-h~~~n 114 (173)
T d1od5a2 94 GELRRGQLLVVPQNFV-VAEQG 114 (173)
T ss_dssp EEEETTCEEEECTTCE-EEEEE
T ss_pred EEECCCCEEEECCCCE-EEEEC
T ss_conf 7843982899889977-99972
No 23
>d1dzfa2 d.78.1.1 (A:144-215) Eukaryotic RPB5 C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} SCOP: d1eika_ d1hmja_
Probab=20.79 E-value=25 Score=14.02 Aligned_cols=13 Identities=31% Similarity=0.608 Sum_probs=8.7
Q ss_pred CCCCCCEEEEECC
Q ss_conf 0577867987269
Q T0630 7 EPKPGDLIEIFRP 19 (132)
Q Consensus 7 ~~k~GDlI~~~r~ 19 (132)
.++|||++++-|.
T Consensus 46 g~k~GdvikI~R~ 58 (72)
T d1dzfa2 46 GLKRGEVVKIIRK 58 (72)
T ss_dssp TCCTTCEEEEECT
T ss_pred CCCCCCEEEEEEC
T ss_conf 7998987889847
Done!