Query T0636 YP_108324.1, BURKHOLDERIA PSEUDOMALLEI, 336 residues
Match_columns 336
No_of_seqs 141 out of 7282
Neff 8.0
Searched_HMMs 22458
Date Thu Jul 22 15:14:32 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0636.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/pdb70_15May10_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/pdb70search/T0636.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ffh_A Histidinol-phosphate am 100.0 0 0 480.7 32.5 324 10-333 27-363 (363)
2 3get_A Histidinol-phosphate am 100.0 0 0 477.4 32.3 323 10-333 25-364 (365)
3 3ftb_A Histidinol-phosphate am 100.0 0 0 478.9 31.0 333 1-335 12-360 (361)
4 3hdo_A Histidinol-phosphate am 100.0 0 0 471.4 34.5 320 13-334 24-353 (360)
5 3cq5_A Histidinol-phosphate am 100.0 0 0 470.2 34.0 318 15-335 30-367 (369)
6 1fg7_A Histidinol phosphate am 100.0 0 0 470.9 28.9 315 10-330 24-352 (356)
7 3fkd_A L-threonine-O-3-phospha 100.0 0 0 466.2 28.1 319 12-335 12-341 (350)
8 3euc_A Histidinol-phosphate am 100.0 0 0 459.4 30.9 323 12-335 27-367 (367)
9 1lc5_A COBD, L-threonine-O-3-p 100.0 0 0 456.2 31.7 331 5-335 14-359 (364)
10 3ly1_A Putative histidinol-pho 100.0 0 0 456.5 29.5 325 11-336 12-352 (354)
11 1uu1_A Histidinol-phosphate am 100.0 0 0 453.7 26.3 317 7-333 11-335 (335)
12 1j32_A Aspartate aminotransfer 100.0 0 0 414.4 31.1 333 2-334 17-385 (388)
13 1b5p_A Protein (aspartate amin 100.0 0 0 403.9 30.7 334 3-336 19-385 (385)
14 3h14_A Aminotransferase, class 100.0 0 0 394.5 29.6 333 1-334 17-380 (391)
15 1o4s_A Aspartate aminotransfer 100.0 0 0 398.1 25.7 331 3-335 29-388 (389)
16 1xi9_A Putative transaminase; 100.0 0 0 392.4 27.1 333 3-335 26-402 (406)
17 3b46_A Aminotransferase BNA3; 100.0 0 0 382.2 26.8 327 9-335 51-446 (447)
18 2z61_A Probable aspartate amin 100.0 0 0 376.6 29.9 327 2-335 16-370 (370)
19 3fvs_A Kynurenine--oxoglutarat 100.0 0 0 371.2 33.0 322 14-335 27-421 (422)
20 3dyd_A Tyrosine aminotransfera 100.0 0 0 372.5 30.4 329 7-335 46-423 (427)
21 2gb3_A Aspartate aminotransfer 100.0 0 0 375.7 26.7 332 4-335 32-405 (409)
22 1d2f_A MALY protein; aminotran 100.0 0 0 366.7 31.9 323 12-334 25-387 (390)
23 2dou_A Probable N-succinyldiam 100.0 0 0 372.7 27.1 331 3-334 13-376 (376)
24 3ezs_A Aminotransferase ASPB; 100.0 0 0 372.7 26.6 328 4-335 12-374 (376)
25 1yiz_A Kynurenine aminotransfe 100.0 0 0 368.0 28.7 323 13-335 35-428 (429)
26 3ei9_A LL-diaminopimelate amin 100.0 0 0 365.9 29.1 326 10-335 51-427 (432)
27 3dzz_A Putative pyridoxal 5'-p 100.0 0 0 360.4 32.7 323 12-335 24-388 (391)
28 3fdb_A Beta C-S lyase, putativ 100.0 0 0 363.1 30.5 322 11-335 19-375 (377)
29 2o1b_A Aminotransferase, class 100.0 0 0 368.6 24.8 324 11-334 43-401 (404)
30 2o0r_A RV0858C (N-succinyldiam 100.0 0 0 363.2 28.8 324 12-335 22-395 (411)
31 1bw0_A TAT, protein (tyrosine 100.0 0 0 362.9 28.9 324 12-335 30-412 (416)
32 1gd9_A Aspartate aminotransfer 100.0 0 0 359.9 29.1 330 6-335 17-385 (389)
33 1v2d_A Glutamine aminotransfer 100.0 0 0 357.8 28.0 320 15-335 25-370 (381)
34 1m7y_A ACC synthase, 1-aminocy 100.0 0 0 358.3 27.7 321 14-335 37-431 (435)
35 3g0t_A Putative aminotransfera 100.0 0 0 357.5 26.0 324 12-335 41-436 (437)
36 3kax_A Aminotransferase, class 100.0 0 0 349.6 32.1 322 11-333 20-382 (383)
37 3e2y_A Kynurenine-oxoglutarate 100.0 0 0 350.6 30.4 320 13-332 21-409 (410)
38 1iay_A ACC synthase 2, 1-amino 100.0 0 0 352.4 28.3 322 12-334 33-425 (428)
39 1c7n_A Cystalysin; transferase 100.0 0 0 347.3 31.9 327 7-334 23-391 (399)
40 3jtx_A Aminotransferase; NP_28 100.0 0 0 349.0 27.4 320 13-332 28-394 (396)
41 1u08_A Hypothetical aminotrans 100.0 0 0 347.3 28.7 319 13-333 28-384 (386)
42 3ele_A Amino transferase; RER0 100.0 0 0 354.3 22.3 325 11-335 31-395 (398)
43 1wst_A MSAT, multiple substrat 100.0 0 0 340.5 29.3 320 13-334 39-413 (417)
44 2zyj_A Alpha-aminodipate amino 100.0 0 0 337.2 31.2 318 15-334 32-391 (397)
45 3if2_A Aminotransferase; YP_26 100.0 0 0 343.4 23.0 328 6-334 23-438 (444)
46 2zc0_A Alanine glyoxylate tran 100.0 0 0 334.8 28.8 333 2-335 21-403 (407)
47 3ihj_A Alanine aminotransferas 100.0 0 0 336.4 26.8 319 15-333 63-490 (498)
48 1vp4_A Aminotransferase, putat 100.0 0 0 334.2 27.4 321 12-334 40-420 (425)
49 2r2n_A Kynurenine/alpha-aminoa 100.0 0 0 330.1 24.8 328 5-335 21-423 (425)
50 3bwn_A AT1G70560, L-tryptophan 100.0 0 0 337.2 13.9 314 9-333 16-384 (391)
51 3f6t_A Aspartate aminotransfer 100.0 0 0 328.1 20.1 312 23-334 92-527 (533)
52 3ez1_A Aminotransferase MOCR f 100.0 0 0 323.6 20.7 325 5-332 16-411 (423)
53 2hox_A ALLIIN lyase 1; cystein 100.0 0 0 326.5 16.2 310 12-335 53-424 (427)
54 2zy4_A L-aspartate beta-decarb 100.0 0 0 322.6 18.9 287 45-333 132-519 (546)
55 3d6k_A Putative aminotransfera 100.0 0 0 316.9 22.8 328 3-333 21-415 (422)
56 3g7q_A Valine-pyruvate aminotr 100.0 0 0 315.7 23.4 322 13-335 29-412 (417)
57 7aat_A Aspartate aminotransfer 100.0 1.5E-44 0 306.8 20.0 319 4-333 19-400 (401)
58 2q7w_A Aspartate aminotransfer 100.0 1.1E-42 0 294.7 20.3 312 13-333 24-396 (396)
59 1ajs_A Aspartate aminotransfer 100.0 6E-42 0 290.0 20.5 317 10-335 25-410 (412)
60 3fsl_A Aromatic-amino-acid ami 100.0 8.1E-42 0 289.2 21.0 312 13-333 24-397 (397)
61 1yaa_A Aspartate aminotransfer 100.0 1.2E-41 0 288.0 20.0 315 11-334 25-409 (412)
62 2ay1_A Aroat, aromatic amino a 100.0 4E-40 1.8E-44 278.2 21.5 313 11-332 22-392 (394)
63 3meb_A Aspartate aminotransfer 100.0 2.1E-38 9.5E-43 267.0 23.0 322 4-335 40-443 (448)
64 1eg5_A Aminotransferase; PLP-d 100.0 1.9E-31 8.4E-36 222.0 27.5 315 18-335 3-375 (384)
65 2z9v_A Aspartate aminotransfer 100.0 2.9E-31 1.3E-35 220.8 25.6 308 22-334 13-369 (392)
66 1elu_A L-cysteine/L-cystine C- 100.0 1.1E-28 4.9E-33 204.1 27.2 312 13-332 13-388 (390)
67 2yrr_A Aminotransferase, class 100.0 4.3E-29 1.9E-33 206.8 23.6 311 20-335 2-352 (353)
68 3kki_A CAI-1 autoinducer synth 100.0 4.6E-27 2.1E-31 193.6 24.3 313 11-335 55-403 (409)
69 1svv_A Threonine aldolase; str 100.0 1.5E-27 6.6E-32 196.8 19.4 314 17-336 13-358 (359)
70 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 3E-26 1.3E-30 188.3 25.6 312 12-335 4-369 (371)
71 2aeu_A Hypothetical protein MJ 100.0 6.8E-27 3E-31 192.5 21.6 306 12-333 25-372 (374)
72 3f0h_A Aminotransferase; RER07 99.9 7.5E-24 3.3E-28 172.8 29.0 311 21-336 22-374 (376)
73 3lvm_A Cysteine desulfurase; s 99.9 3.2E-24 1.4E-28 175.2 25.1 312 17-335 23-398 (423)
74 1kmj_A Selenocysteine lyase; p 99.9 1.1E-21 4.8E-26 158.8 32.9 314 15-334 22-403 (406)
75 1jg8_A L-ALLO-threonine aldola 99.9 3.5E-24 1.6E-28 174.9 17.4 313 14-335 2-345 (347)
76 3cai_A Possible aminotransfera 99.9 8.9E-22 4E-26 159.3 29.4 312 15-332 25-405 (406)
77 1fc4_A 2-amino-3-ketobutyrate 99.9 1.7E-22 7.8E-27 163.9 24.9 317 13-335 43-396 (401)
78 1bs0_A Protein (8-amino-7-oxon 99.9 2.1E-22 9.4E-27 163.4 24.5 308 14-332 38-383 (384)
79 2w8t_A SPT, serine palmitoyltr 99.9 1.9E-22 8.3E-27 163.7 22.8 315 13-335 62-414 (427)
80 3a2b_A Serine palmitoyltransfe 99.9 2.9E-21 1.3E-25 156.0 27.5 315 13-335 41-391 (398)
81 3frk_A QDTB; aminotransferase, 99.9 2.2E-22 9.8E-27 163.3 21.5 302 25-334 3-366 (373)
82 2dr1_A PH1308 protein, 386AA l 99.9 1.7E-20 7.6E-25 151.0 29.5 310 20-335 22-378 (386)
83 3a9z_A Selenocysteine lyase; P 99.9 7.4E-21 3.3E-25 153.4 25.2 318 12-335 14-427 (432)
84 1t3i_A Probable cysteine desul 99.9 3.1E-19 1.4E-23 142.9 33.1 315 15-334 27-411 (420)
85 1v72_A Aldolase; PLP-dependent 99.9 1.7E-20 7.6E-25 151.0 25.3 312 15-335 7-352 (356)
86 3ffr_A Phosphoserine aminotran 99.9 1.7E-19 7.7E-24 144.5 25.5 308 20-333 6-361 (362)
87 3f9t_A TDC, L-tyrosine decarbo 99.9 3.7E-18 1.7E-22 135.9 26.5 302 29-335 42-397 (397)
88 3lws_A Aromatic amino acid bet 99.9 3.8E-20 1.7E-24 148.7 16.2 299 28-334 18-354 (357)
89 2huf_A Alanine glyoxylate amin 99.9 7.1E-19 3.2E-23 140.5 22.1 312 18-335 19-382 (393)
90 3b8x_A WBDK, pyridoxamine 5-ph 99.8 1.8E-17 8.1E-22 131.4 26.7 290 30-330 14-390 (390)
91 2bwn_A 5-aminolevulinate synth 99.8 2.5E-17 1.1E-21 130.5 26.4 313 14-334 45-398 (401)
92 3e9k_A Kynureninase; kynurenin 99.8 2.6E-17 1.1E-21 130.5 23.1 313 13-335 64-460 (465)
93 3kgw_A Alanine-glyoxylate amin 99.8 2E-17 9E-22 131.1 22.0 312 19-335 24-387 (393)
94 3ju7_A Putative PLP-dependent 99.8 2E-16 8.7E-21 124.7 26.9 300 27-333 12-372 (377)
95 1qz9_A Kynureninase; kynurenin 99.8 2.4E-17 1.1E-21 130.6 21.4 313 14-335 26-401 (416)
96 3ht4_A Aluminum resistance pro 99.8 7.9E-18 3.5E-22 133.8 16.9 260 31-294 38-339 (431)
97 3gbx_A Serine hydroxymethyltra 99.8 4.5E-16 2E-20 122.4 24.7 321 4-334 19-394 (420)
98 2bkw_A Alanine-glyoxylate amin 99.8 1.2E-15 5.1E-20 119.7 25.8 309 20-334 7-382 (385)
99 2ez2_A Beta-tyrosinase, tyrosi 99.8 2.3E-15 1E-19 117.8 25.9 309 17-335 44-430 (456)
100 1e5e_A MGL, methionine gamma-l 99.8 3E-15 1.3E-19 117.0 25.2 272 49-333 61-396 (404)
101 1vjo_A Alanine--glyoxylate ami 99.8 4E-15 1.8E-19 116.2 25.7 310 19-333 35-392 (393)
102 2z67_A O-phosphoseryl-tRNA(SEC 99.8 3.6E-15 1.6E-19 116.5 25.5 269 62-333 145-455 (456)
103 1iug_A Putative aspartate amin 99.8 7.8E-16 3.5E-20 120.9 21.5 307 22-335 5-347 (352)
104 1m32_A 2-aminoethylphosphonate 99.7 1.5E-15 6.7E-20 119.0 21.2 306 22-334 8-363 (366)
105 2oga_A Transaminase; PLP-depen 99.7 2.6E-14 1.1E-18 111.0 24.9 293 32-335 45-395 (399)
106 1mdo_A ARNB aminotransferase; 99.7 9.3E-14 4.1E-18 107.4 27.6 293 31-336 20-386 (393)
107 3cog_A Cystathionine gamma-lya 99.7 5E-15 2.2E-19 115.6 20.5 208 48-268 65-285 (403)
108 3dr4_A Putative perosamine syn 99.7 4.5E-14 2E-18 109.5 24.8 288 34-333 39-390 (391)
109 2po3_A 4-dehydrase; external a 99.7 1.8E-13 8E-18 105.5 27.3 312 11-334 10-384 (424)
110 1ax4_A Tryptophanase; tryptoph 99.7 1.8E-14 7.9E-19 112.0 21.8 285 45-335 70-440 (467)
111 2ch1_A 3-hydroxykynurenine tra 99.7 8.9E-15 3.9E-19 114.0 20.1 310 19-334 19-381 (396)
112 3jzl_A Putative cystathionine 99.7 1.6E-14 7E-19 112.4 21.1 258 32-294 33-333 (409)
113 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 4.7E-14 2.1E-18 109.3 22.9 279 56-335 104-442 (450)
114 2rfv_A Methionine gamma-lyase; 99.7 3.9E-13 1.7E-17 103.3 27.4 274 45-331 56-395 (398)
115 1ibj_A CBL, cystathionine beta 99.7 8.9E-14 4E-18 107.5 22.2 270 49-331 132-461 (464)
116 1bjn_A PSAT, phosphoserine ami 99.7 1.3E-15 5.6E-20 119.5 12.5 308 20-335 3-358 (360)
117 2eh6_A Acoat, acetylornithine 99.6 2.3E-13 1E-17 104.8 23.0 308 13-332 26-374 (375)
118 2c81_A Glutamine-2-deoxy-scyll 99.6 1.1E-12 5E-17 100.4 26.0 263 30-303 15-341 (418)
119 2cb1_A O-acetyl homoserine sul 99.6 7.6E-13 3.4E-17 101.5 24.9 272 46-330 49-410 (412)
120 3bv0_A Adenosylmethionine-8-am 99.6 1.7E-13 7.4E-18 105.8 21.1 312 13-335 53-432 (437)
121 1gc0_A Methionine gamma-lyase; 99.6 4.6E-13 2E-17 102.9 23.4 207 49-268 64-284 (398)
122 1qgn_A Protein (cystathionine 99.6 1.9E-13 8.6E-18 105.3 21.4 274 48-331 112-444 (445)
123 1cs1_A CGS, protein (cystathio 99.6 1.1E-12 4.7E-17 100.6 24.4 271 49-332 51-383 (386)
124 3i4j_A Aminotransferase, class 99.6 3.2E-12 1.4E-16 97.5 26.4 319 13-335 27-427 (430)
125 3e6g_A Xometc, cystathionine g 99.6 4.6E-13 2.1E-17 102.9 21.9 209 48-269 65-287 (400)
126 3i16_A Aluminum resistance pro 99.6 8.7E-14 3.9E-18 107.6 18.1 261 32-294 47-350 (427)
127 1b9h_A AHBA synthase, protein 99.6 5.3E-12 2.3E-16 96.0 26.0 296 30-336 16-388 (388)
128 1sff_A 4-aminobutyrate aminotr 99.6 3.8E-12 1.7E-16 96.9 24.5 317 13-335 39-423 (426)
129 2ord_A Acoat, acetylornithine 99.6 6.3E-13 2.8E-17 102.0 20.3 314 13-335 38-396 (397)
130 2oqx_A Tryptophanase; lyase, p 99.6 1.8E-12 7.8E-17 99.1 22.6 286 45-335 68-441 (467)
131 2c0r_A PSAT, phosphoserine ami 99.6 3.7E-14 1.6E-18 110.0 13.9 305 20-335 6-360 (362)
132 2pb2_A Acetylornithine/succiny 99.6 4.2E-12 1.9E-16 96.6 24.4 308 13-335 55-417 (420)
133 1w23_A Phosphoserine aminotran 99.6 2.3E-14 1E-18 111.4 12.5 306 21-336 6-360 (360)
134 3ecd_A Serine hydroxymethyltra 99.6 7.4E-12 3.3E-16 95.1 25.0 323 3-333 20-394 (425)
135 2vi8_A Serine hydroxymethyltra 99.6 3.3E-12 1.5E-16 97.4 22.4 323 3-334 11-385 (405)
136 2fq6_A Cystathionine beta-lyas 99.6 2.2E-12 9.7E-17 98.5 21.1 270 49-331 81-413 (415)
137 2fyf_A PSAT, phosphoserine ami 99.6 1E-12 4.5E-17 100.7 19.3 304 20-335 42-397 (398)
138 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.6 7E-12 3.1E-16 95.2 22.9 294 31-336 43-436 (437)
139 1pff_A Methionine gamma-lyase; 99.6 1.6E-11 7.3E-16 92.8 24.6 267 54-331 2-329 (331)
140 1s0a_A Adenosylmethionine-8-am 99.5 1.4E-11 6.4E-16 93.2 23.4 314 13-335 41-423 (429)
141 3ke3_A Putative serine-pyruvat 99.5 1.6E-11 7.1E-16 92.9 23.5 278 53-335 38-375 (379)
142 2dkj_A Serine hydroxymethyltra 99.5 1.6E-11 6.9E-16 93.0 23.2 322 3-333 11-385 (407)
143 2eo5_A 419AA long hypothetical 99.5 3.3E-11 1.5E-15 90.8 24.7 312 13-335 40-417 (419)
144 1zod_A DGD, 2,2-dialkylglycine 99.5 7.4E-11 3.3E-15 88.6 26.1 319 13-335 41-431 (433)
145 3hbx_A GAD 1, glutamate decarb 99.5 3E-11 1.3E-15 91.1 24.0 306 28-335 67-443 (502)
146 1z7d_A Ornithine aminotransfer 99.5 2.8E-11 1.3E-15 91.3 23.3 306 14-334 64-427 (433)
147 2oat_A Ornithine aminotransfer 99.5 3.4E-11 1.5E-15 90.8 23.6 311 13-334 74-437 (439)
148 3fq8_A Glutamate-1-semialdehyd 99.5 7.7E-12 3.4E-16 95.0 20.4 314 13-335 50-426 (427)
149 3l44_A Glutamate-1-semialdehyd 99.5 2.1E-11 9.3E-16 92.2 22.4 314 13-334 53-428 (434)
150 3m5u_A Phosphoserine aminotran 99.5 9.4E-13 4.2E-17 100.9 15.0 303 19-335 6-359 (361)
151 2dgk_A GAD-beta, GADB, glutama 99.5 7.7E-11 3.4E-15 88.5 24.6 305 29-334 54-432 (452)
152 1vef_A Acetylornithine/acetyl- 99.5 8.5E-11 3.8E-15 88.2 23.9 306 13-333 43-394 (395)
153 2a7v_A Serine hydroxymethyltra 99.5 2.5E-11 1.1E-15 91.6 21.2 321 3-331 42-436 (490)
154 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 6.5E-11 2.9E-15 89.0 23.1 278 55-334 121-459 (501)
155 3k28_A Glutamate-1-semialdehyd 99.5 4.5E-11 2E-15 90.0 21.9 313 13-335 51-426 (429)
156 3h7f_A Serine hydroxymethyltra 99.5 5.7E-11 2.5E-15 89.3 22.2 324 3-334 33-412 (447)
157 2ctz_A O-acetyl-L-homoserine s 99.5 3.7E-11 1.6E-15 90.6 20.8 275 45-331 50-418 (421)
158 1c4k_A Protein (ornithine deca 99.5 2.1E-10 9.2E-15 85.7 24.0 269 53-334 176-564 (730)
159 3a8u_X Omega-amino acid--pyruv 99.5 1.4E-10 6.1E-15 86.9 23.1 314 13-335 48-446 (449)
160 3dxv_A Alpha-amino-epsilon-cap 99.5 1.2E-10 5.4E-15 87.2 22.8 317 13-335 54-437 (452)
161 3i5t_A Aminotransferase; pyrid 99.4 2E-10 9E-15 85.8 23.4 312 13-334 52-452 (476)
162 3hvy_A Cystathionine beta-lyas 99.4 5.5E-11 2.4E-15 89.4 20.0 260 32-294 48-350 (427)
163 2fnu_A Aminotransferase; prote 99.4 1.6E-10 7.2E-15 86.4 22.4 294 30-335 12-371 (375)
164 2e7u_A Glutamate-1-semialdehyd 99.4 2.6E-11 1.1E-15 91.6 18.3 309 13-332 50-423 (424)
165 3gju_A Putative aminotransfera 99.4 9E-10 4E-14 81.6 26.1 314 14-334 50-454 (460)
166 2epj_A Glutamate-1-semialdehyd 99.4 2.9E-11 1.3E-15 91.2 18.2 313 13-334 54-429 (434)
167 1rv3_A Serine hydroxymethyltra 99.4 2.1E-10 9.3E-15 85.7 22.2 321 3-332 32-427 (483)
168 1n8p_A Cystathionine gamma-lya 99.4 1.1E-10 4.8E-15 87.6 20.1 270 49-332 54-391 (393)
169 2cy8_A D-phgat, D-phenylglycin 99.4 4.3E-10 1.9E-14 83.6 22.6 311 13-334 55-433 (453)
170 2vyc_A Biodegradative arginine 99.4 4.3E-10 1.9E-14 83.6 22.4 274 53-334 208-603 (755)
171 1o69_A Aminotransferase; struc 99.4 5E-10 2.2E-14 83.2 22.2 289 34-334 15-385 (394)
172 1js3_A DDC;, DOPA decarboxylas 99.4 6.4E-09 2.9E-13 76.0 27.2 278 55-335 118-473 (486)
173 3hmu_A Aminotransferase, class 99.4 8.5E-10 3.8E-14 81.7 22.0 313 14-334 54-450 (472)
174 2jis_A Cysteine sulfinic acid 99.3 2.3E-08 1E-12 72.4 28.4 279 55-335 153-514 (515)
175 1wyu_A Glycine dehydrogenase ( 99.3 3.7E-09 1.7E-13 77.6 23.9 297 29-333 78-437 (438)
176 2qma_A Diaminobutyrate-pyruvat 99.3 5.5E-09 2.5E-13 76.5 23.6 279 55-335 145-495 (497)
177 2okj_A Glutamate decarboxylase 99.3 6.1E-08 2.7E-12 69.7 28.9 279 55-335 137-501 (504)
178 3dod_A Adenosylmethionine-8-am 99.3 3.2E-09 1.4E-13 78.0 22.3 314 13-335 42-442 (448)
179 2cjg_A L-lysine-epsilon aminot 99.2 1.6E-09 7.1E-14 80.0 18.1 315 13-334 52-446 (449)
180 3k40_A Aromatic-L-amino-acid d 99.2 1.5E-07 6.6E-12 67.2 26.6 277 55-335 118-470 (475)
181 1wyu_B Glycine dehydrogenase s 99.1 1.6E-07 7.3E-12 66.9 23.5 300 30-335 79-440 (474)
182 1ohv_A 4-aminobutyrate aminotr 99.1 5.8E-08 2.6E-12 69.9 19.6 310 13-335 61-470 (472)
183 3e77_A Phosphoserine aminotran 98.8 9.5E-07 4.2E-11 62.0 17.1 304 17-335 10-374 (377)
184 1tg7_A Beta-galactosidase; TIM 51.7 6.1 0.00027 17.9 2.1 13 110-122 149-161 (971)
185 1ozh_A ALS, acetolactate synth 49.2 9.1 0.00041 16.7 2.7 21 67-87 74-96 (566)
186 2ez9_A Pyruvate oxidase; TPP e 44.1 13 0.00059 15.7 6.1 18 148-165 222-239 (603)
187 3kwm_A Ribose-5-phosphate isom 43.4 11 0.00049 16.2 2.4 111 52-171 9-126 (224)
188 1wi3_A DNA-binding protein SAT 37.8 16 0.00073 15.1 2.8 39 29-70 14-52 (71)
189 3dr5_A Putative O-methyltransf 35.6 18 0.00079 14.9 4.6 138 27-173 15-166 (221)
190 1ynf_A Succinylarginine dihydr 35.5 18 0.0008 14.8 3.8 30 306-335 371-411 (458)
191 3ec7_A Putative dehydrogenase; 32.4 20 0.00089 14.5 5.8 11 88-98 110-120 (357)
192 1a9x_B Carbamoyl phosphate syn 32.2 20 0.0009 14.5 3.5 13 322-334 366-378 (379)
193 3fym_A Putative uncharacterize 32.1 12 0.00055 15.9 1.1 42 27-70 26-68 (130)
194 1t9b_A Acetolactate synthase, 29.8 22 0.00099 14.2 3.7 18 44-61 100-117 (677)
195 3fk5_A 3-oxoacyl-synthase III; 28.6 23 0.001 14.1 6.1 34 48-81 93-128 (338)
196 1m0s_A Ribose-5-phosphate isom 27.7 24 0.0011 14.0 2.3 112 53-171 4-120 (219)
197 1uhs_A HOP, homeodomain only p 27.3 24 0.0011 14.0 3.1 36 32-70 11-46 (72)
198 1msk_A Cobalamin-dependent met 26.7 3 0.00013 19.8 -2.7 32 268-301 236-270 (331)
199 2o7r_A CXE carboxylesterase; a 23.7 28 0.0013 13.5 3.5 49 285-335 281-329 (338)
200 1q6z_A BFD, BFDC, benzoylforma 22.8 30 0.0013 13.4 3.1 19 311-334 494-512 (528)
201 1z6b_A Pffabz, fatty acid synt 21.4 26 0.0011 13.8 1.2 28 143-172 5-33 (154)
202 2kii_A Putative uncharacterize 21.3 30 0.0013 13.4 1.5 31 45-75 40-70 (181)
203 2zpa_A Uncharacterized protein 20.6 33 0.0015 13.1 5.6 63 54-117 179-245 (671)
204 2e8y_A AMYX protein, pullulana 20.3 33 0.0015 13.1 1.9 69 104-175 258-341 (718)
No 1
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria innocua CLIP11262, structural genomics, PSI-2, protein structure initiative; 2.31A {Listeria innocua}
Probab=100.00 E-value=0 Score=480.74 Aligned_cols=324 Identities=22% Similarity=0.356 Sum_probs=292.5
Q ss_pred HHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--
Q ss_conf 503665535735765488876899999999987500588986189999999984888543886077889999999984--
Q T0636 10 EVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-- 87 (336)
Q Consensus 10 ~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-- 87 (336)
+..+.+++|+|++|||||||||.++++++.+..++++|||+++.+||++||+|+++++|+|++|+|++++|.++++++
T Consensus 27 ~~~g~~~~i~l~~Nenp~gp~p~v~~al~~~~~~~~~YP~~~~~~Lr~~iA~~~~i~~d~I~~t~Ga~~~i~~~~~~l~~ 106 (363)
T 3ffh_A 27 AELGLTKITKLSSNENPLGTSKKVAAIQANSSVETEIYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLD 106 (363)
T ss_dssp HTTTCSCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCS
T ss_pred HHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHHC
T ss_conf 87499986995489999888899999999646751669998889999999999785879999828788999999999708
Q ss_pred CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHH---
Q ss_conf 699257638873569999998188036415543567788999730--002431330366332222237999999973---
Q T0636 88 SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQR--- 162 (336)
Q Consensus 88 ~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~--- 162 (336)
+||.|+++.|+|..|...++..|.+++.++++.++..+++++.+. .+++++++||||||||.+++.+++.++++.
T Consensus 107 ~gd~vi~~~P~y~~~~~~a~~~g~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~l~nPnNPtG~~~~~~el~~l~~~~~~ 186 (363)
T 3ffh_A 107 TTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPS 186 (363)
T ss_dssp TTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT
T ss_pred CCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 99989983686047789998659720132013454205899997567798389977998998710448999999997334
Q ss_pred CCCCCCCCCCCCCCC---CCC-CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf 787202521002588---662-0033245200120234652334345313117889999997337877877778999999
Q T0636 163 AGKLLIDETYVDYSS---FRA-RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEA 238 (336)
Q Consensus 163 ~~~~IvDeaY~~f~~---~~~-~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~aa~~ 238 (336)
+.++|+||.|.+|.. ... .....++|+++++||||.||+||+|+||+++++++++.+++...+|++|+++|.++.+
T Consensus 187 ~~~~iidD~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~gl~G~R~G~~~~~~~~~~~l~~~~~~~~~~~~~q~a~~~ 266 (363)
T 3ffh_A 187 DVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRPPFNTTSIGQKLAIE 266 (363)
T ss_dssp TSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCCSCCCBHHHHHHHHH
T ss_pred CCEEEEECHHHHHHCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 83899964026764257764212330367457622565321466544423459999999999740874445699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCCCEEEEECC-CHHHHHHHHHHCCCEEEECCCCCCCCEEEEEE
Q ss_conf 97459999999999999999999999858-97861698647886569-88999999987693896077888887478874
Q T0636 239 ALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVASSEANFVLVENA-AGERTLRFLRERGIQVKDAGQFGLHHHIRISI 316 (336)
Q Consensus 239 ~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~s~~~Fi~~~~~-~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~ 316 (336)
++++.+++.+.++.+...++++.+.++++ |++++||+|||+|++++ +++.+++.|.++||+||+|+.||+++|+|||+
T Consensus 267 al~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ps~a~fv~~~~~~~~~~l~~~L~~~gI~vr~g~~fg~~~~iRis~ 346 (363)
T 3ffh_A 267 AIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGIEAGTIFSYLEKNGYITRSGAALGFPTAVRITI 346 (363)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSEEEEECSSCHHHHHHHHHHTTEECEETTTTTCTTEEEEEC
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE
T ss_conf 98593999999999999888899999856997677898528999689999999999980997997688789999899970
Q ss_pred CCHHHHHHHHHHHHHHH
Q ss_conf 79899999999999998
Q T0636 317 GREEDNDRLLAALAEYS 333 (336)
Q Consensus 317 ~~~ee~~~l~~aL~~~~ 333 (336)
|+++||++++++|++++
T Consensus 347 ~~~ee~~~~i~al~~il 363 (363)
T 3ffh_A 347 GKEEDNSAVIALLEKLL 363 (363)
T ss_dssp CCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHC
T ss_conf 89999999999999869
No 2
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=0 Score=477.37 Aligned_cols=323 Identities=23% Similarity=0.337 Sum_probs=288.4
Q ss_pred HHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--
Q ss_conf 503665535735765488876899999999987500588986189999999984888543886077889999999984--
Q T0636 10 EVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-- 87 (336)
Q Consensus 10 ~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-- 87 (336)
+..+.+++|+|++|||||||||.+++|+++++.+.++||++++.+||++||++|++++|+|++|+|+++++.++++.+
T Consensus 25 ~~~g~~~~i~l~~nenp~~ppp~v~~al~~~~~~~~~YP~~g~~~Lr~aiA~~~~~~~~~i~it~G~~~~l~~~~~~~~~ 104 (365)
T 3get_A 25 KEYGVKEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLN 104 (365)
T ss_dssp HHTTCSCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred HHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCC
T ss_conf 98099988993398999889999999999877640769988889999999999788945299857758999988874049
Q ss_pred CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHH--HCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH---
Q ss_conf 69925763887356999999818803641554356778899973--0002431330366332222237999999973---
Q T0636 88 SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQ--VSRDDCVVLANPSNPTGQALSAGELDQLRQR--- 162 (336)
Q Consensus 88 ~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~--~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~--- 162 (336)
++|.|++++|+|+.|...++..+..+..++...++..+.+.+.+ ..+++++++||||||||.+++.++++++++.
T Consensus 105 ~~d~v~~~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~l~nP~NPtG~~~~~~~l~~l~~~~~~ 184 (365)
T 3get_A 105 SKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNE 184 (365)
T ss_dssp TTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCT
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 99879976676505789999874201224454334557999997454686089973899975210001689999985433
Q ss_pred CCCCCCCCCCCCCC---C-C---CC-CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 78720252100258---8-6---62-003324520012023465233434531311788999999733787787777899
Q T0636 163 AGKLLIDETYVDYS---S-F---RA-RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLH 234 (336)
Q Consensus 163 ~~~~IvDeaY~~f~---~-~---~~-~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~ 234 (336)
++.+|+||.|.+|. . . +. .....++|+|+++||||+||+||+|+||+++++++++.+++...+|++|.++|.
T Consensus 185 ~~~~ii~D~~~~~~~~~~~~~~~s~~~~~~~~~nvIvi~S~SK~~gl~GlR~G~~i~~~~~~~~~~~~~~~~~vs~~~~~ 264 (365)
T 3get_A 185 DCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPFNVSNLALK 264 (365)
T ss_dssp TSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSCTTCSCHHHHH
T ss_pred CCEEEEECCHHHHHHCCCCCCCCCHHHHHCCCCCEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 73799853036453135665654111110357977998037077425864444445999999999973176556799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECC--CHHHHHHHHHHCCCEEEECCCCCCCCEE
Q ss_conf 99999745999999999999999999999985897861698647886569--8899999998769389607788888747
Q T0636 235 ALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENA--AGERTLRFLRERGIQVKDAGQFGLHHHI 312 (336)
Q Consensus 235 aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~--~~~~~~~~L~~~gi~vr~~~~fg~~~~i 312 (336)
++.+++.+.+++.+.++.++++|+++.+.|+..|++++||+|||+|++.+ ++.++++.|+++||+||||+.||. +|+
T Consensus 265 ~a~~al~~~~~~~~~~~~~~~~r~~l~~~l~~~g~~v~~~~~~f~~~~~~~~~~~~~~~~L~~~gV~v~p~~~fg~-~~i 343 (365)
T 3get_A 265 AAVAAMDDDEFTEKTLENNFSQMELYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNLKSYGL-NAI 343 (365)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSSEEEEECSSSCHHHHHHHHHTTTEECEECGGGTC-SEE
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCC-CEE
T ss_conf 9999984652557999999987899999998589878889877899988999999999999858939982787891-969
Q ss_pred EEEECCHHHHHHHHHHHHHHH
Q ss_conf 887479899999999999998
Q T0636 313 RISIGREEDNDRLLAALAEYS 333 (336)
Q Consensus 313 Ris~~~~ee~~~l~~aL~~~~ 333 (336)
|||+|+++||++++++|++++
T Consensus 344 Ris~~~~ee~~~~l~al~~il 364 (365)
T 3get_A 344 RITIGTSYENEKFFTEFDKIL 364 (365)
T ss_dssp EEECCCHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHHH
T ss_conf 998599999999999999973
No 3
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=0 Score=478.91 Aligned_cols=333 Identities=20% Similarity=0.322 Sum_probs=299.3
Q ss_pred CCHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHH
Q ss_conf 95115789750366553573576548887689999999998750058898618999999998488854388607788999
Q T0636 1 MSVGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECF 80 (336)
Q Consensus 1 ~~~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i 80 (336)
||+|+.+++...++.++|||++|+|||||||.+++|+.+++.++++|||+++.+||++||+++++++++|++|+|+++++
T Consensus 12 ~hgg~~~~~~~~~g~~lid~s~n~Np~g~p~~~~~al~~~~~~~~~Yp~~~~~~Lr~~ia~~~~~~~~~I~~t~G~~~~~ 91 (361)
T 3ftb_A 12 IHGGDIYTEGVFKGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEII 91 (361)
T ss_dssp ----------------CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHH
T ss_pred CCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCHHHHH
T ss_conf 73988999676669966987899998787999999999998760369997699999999998694855199847299999
Q ss_pred HHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH-CCHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 9999984699257638873569999998188036415543567788999730-002431330366332222237999999
Q T0636 81 DRISAEFSSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV-SRDDCVVLANPSNPTGQALSAGELDQL 159 (336)
Q Consensus 81 ~~~~~~~~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~-~~~~~i~l~nPnNPTG~~~~~~~l~~l 159 (336)
.+++++ +|+|+++.|+|+.|...++..|++++.++.+++|.+|++++++. .+++++++||||||||.+++.+++.+|
T Consensus 92 ~~~~~~--~d~Vlv~~P~y~~~~~~~~~~g~~~v~~~~~~~~~~d~~~l~~~~~~~~~~ii~nP~NPtG~~~~~~~l~~i 169 (361)
T 3ftb_A 92 ELSISL--FEKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHV 169 (361)
T ss_dssp HHHHTT--CSEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTTCSEEEEETTBTTTTBCCCHHHHHHH
T ss_pred HHHHHH--CCEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 999985--898999079747899999987998999745988898999998626676689857998986867699999999
Q ss_pred ---HHHCCC-CCCCCCCCCCCCCCC----CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCC-HHHHHHHHHCCCCCCCCH
Q ss_conf ---973787-202521002588662----00332452001202346523343453131178-899999973378778777
Q T0636 160 ---RQRAGK-LLIDETYVDYSSFRA----RGLAYGENELVFRSFSKSYGLAGLRLGALFGP-SELIAAMKRKQWFCNVGT 230 (336)
Q Consensus 160 ---~~~~~~-~IvDeaY~~f~~~~~----~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~-~~~i~~l~~~~~~~~~~~ 230 (336)
+++++. +|+||+|.+|..... ..+..++|+++++||||+||+||+|+||++++ +.+.+.++....+|++|.
T Consensus 170 ~~~a~~~~~~vi~Deay~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~~v~~~~~i~~~~~~~~~~~~~~~ 249 (361)
T 3ftb_A 170 LKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINC 249 (361)
T ss_dssp HHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCH
T ss_pred HHHHHHCCEEEEEECCHHHHCCCCCCCCHHHHCCCCCEEEECCCHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCH
T ss_conf 99876348499996010442456565502220267855997345164247876504799782999999998508889659
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEECCCCCEEEEECC--CHHHHHHHHHHCCCEEEECCCC
Q ss_conf 789999999745999999999999999999999985897--861698647886569--8899999998769389607788
Q T0636 231 LDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY--RVASSEANFVLVENA--AGERTLRFLRERGIQVKDAGQF 306 (336)
Q Consensus 231 ~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~~~s~~~Fi~~~~~--~~~~~~~~L~~~gi~vr~~~~f 306 (336)
++|.++.+++++.+++++.++++.++|+++.+.|+++|+ .+.|++|||+|++++ +++++++.|.++||+|+||+.|
T Consensus 250 ~~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~fv~~~~~~~~~~~~~~~L~~~gI~v~~~~~f 329 (361)
T 3ftb_A 250 FAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLENISGEKLYDSLLKEDIVIRRCCNF 329 (361)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESSSCHHHHHHHHHTTTEECEECTTS
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEECCCC
T ss_conf 99999999853889999999999999999999997189975257998869999899999999999999789399957556
Q ss_pred C-C-CCEEEEEECCHHHHHHHHHHHHHHHHC
Q ss_conf 8-8-874788747989999999999999842
Q T0636 307 G-L-HHHIRISIGREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 307 g-~-~~~iRis~~~~ee~~~l~~aL~~~~e~ 335 (336)
+ . ++|+|||++++||+++|++||+++.++
T Consensus 330 ~~~~~~~iRis~~t~ee~~~li~aL~~i~~~ 360 (361)
T 3ftb_A 330 IGLDDSFVRFAIKDEKKNTKFLRALKGVENN 360 (361)
T ss_dssp TTCCTTEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHHHC
T ss_conf 8889997999728999999999999999951
No 4
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=0 Score=471.39 Aligned_cols=320 Identities=27% Similarity=0.411 Sum_probs=291.3
Q ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHH----HHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-
Q ss_conf 665535735765488876899999999987----500588986189999999984888543886077889999999984-
Q T0636 13 AAAQAVCLAFNENPEAVEPRVQAAIAAAAA----RINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF- 87 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~p~~~v~~al~~~~~----~~~~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~- 87 (336)
..++.|||++|||||||||.+++|+.+++. .+++|||+++.+||++||++||+++|+|++|+|+++++..+++++
T Consensus 24 ~~~~~i~L~~nenp~~p~p~v~~a~~~~l~~~~~~~~~Yp~~~~~~Lr~aiA~~~~~~~~~I~it~Ga~~ai~~~~~~~~ 103 (360)
T 3hdo_A 24 DIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFA 103 (360)
T ss_dssp CCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 25990786898989999999999999997506454220998767999999998853316531455541678888987424
Q ss_pred -CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf -6992576388735699999981880364155435677889997300024313303663322222379999999737872
Q T0636 88 -SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGKL 166 (336)
Q Consensus 88 -~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~ 166 (336)
+|+.|++++|+|..|...+...|.++..++.+.++... ...+..++|++++||||||||.+++.++|.+|+++++.+
T Consensus 104 ~~g~~V~~~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~kli~l~nP~NPtG~~~~~~ei~~la~~~~~~ 181 (360)
T 3hdo_A 104 AEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRIA--GFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGM 181 (360)
T ss_dssp CTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSBT--TCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSE
T ss_pred CCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHH--HHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 579668614330168889999729753234322111115--655400343221001367876768899999999876864
Q ss_pred -CCCCCCCCCCCCCCCH-HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf -0252100258866200-33245200120234652334345313117889999997337877877778999999974599
Q T0636 167 -LIDETYVDYSSFRARG-LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAALDNDR 244 (336)
Q Consensus 167 -IvDeaY~~f~~~~~~~-l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~aa~~~l~~~~ 244 (336)
|+||+|.+|....... +..++|+|+++||||+||+||+|+||+++++++++.+.+.+.+++++..+|.++.+++.+.+
T Consensus 182 ii~De~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~GlR~G~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 261 (360)
T 3hdo_A 182 LVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRDHYNLDRLAQAACVAALRDQA 261 (360)
T ss_dssp EEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCHH
T ss_pred CHHHHHHHHHCCCCCCCCHHHCCCEEEECCCCHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 01345555422332002432249789986483885087342113204604677765302232000012233333344235
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECC--CHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCHHHH
Q ss_conf 9999999999999999999985897861698647886569--88999999987693896077888887478874798999
Q T0636 245 AREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENA--AGERTLRFLRERGIQVKDAGQFGLHHHIRISIGREEDN 322 (336)
Q Consensus 245 ~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~--~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~~~ee~ 322 (336)
++.+.++.+.++|+++.+.++++|++++|++|+|+|++.+ +++++++.|.++||+||+++.|+.++|+|||+++++|+
T Consensus 262 ~~~~~~~~~~~~r~~l~~~l~~~g~~~~p~~~~fl~~~~~~~d~~~~~~~L~~~gI~v~~~~~~~~~~~lRis~~~~ee~ 341 (360)
T 3hdo_A 262 YLSECCRRIRETREWFTTELRSIGYDVIPSQGNYLFATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIGTREEM 341 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSSEEEEECTTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCHHHH
T ss_conf 67888879999989988888856975898988289898999989999999997892897088888899899983899999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999984
Q T0636 323 DRLLAALAEYSD 334 (336)
Q Consensus 323 ~~l~~aL~~~~e 334 (336)
++++++|+++.|
T Consensus 342 ~~l~~aL~~i~e 353 (360)
T 3hdo_A 342 EQTLAALKEIGE 353 (360)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999978
No 5
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=0 Score=470.23 Aligned_cols=318 Identities=26% Similarity=0.376 Sum_probs=286.0
Q ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHH----HHHCCCCCCHHHHHHHHHHHH------CCCHHHEEEECCHHHHHHHHH
Q ss_conf 5535735765488876899999999987----500588986189999999984------888543886077889999999
Q T0636 15 AQAVCLAFNENPEAVEPRVQAAIAAAAA----RINRYPFDAEPRVMRKLAEHF------SCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 15 ~~~i~L~~Nenp~~p~~~v~~al~~~~~----~~~~Ypd~~~~~Lr~aia~~~------~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
...|+|++|||||||||.+++++.+++. ++++|||+++.+||++||+++ ++++|+|++|+|++++|.+++
T Consensus 30 ~~~i~l~~nenp~~p~~~v~~a~~~~~~~~~~~~~~Yp~~~~~~Lr~aia~~~~~~~g~~~~~~~I~~t~G~~~~i~~~~ 109 (369)
T 3cq5_A 30 NVDIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLL 109 (369)
T ss_dssp CCSEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHH
T ss_conf 99677168999999899999999999975445217699998799999999998897588988314999059899999999
Q ss_pred HHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH---CCHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 984--699257638873569999998188036415543567788999730---002431330366332222237999999
Q T0636 85 AEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQL 159 (336)
Q Consensus 85 ~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~---~~~~~i~l~nPnNPTG~~~~~~~l~~l 159 (336)
+++ +||+|++++|+|..|...++..|++++.++.+++|.+|.+++.+. .+++++++||||||||.+++.+++.++
T Consensus 110 ~~~~~pGd~vl~~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~d~~~~~~~~~~~~~~~v~l~~P~NPtG~~~~~~el~~l 189 (369)
T 3cq5_A 110 QAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERI 189 (369)
T ss_dssp HHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 99728989899938971689999986595699931688878599999998524798489988999986542115799999
Q ss_pred HHHCCC-CCCCCCCCCCCCCCC--CHHH-HCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 973787-202521002588662--0033-245200120234652334345313117889999997337877877778999
Q T0636 160 RQRAGK-LLIDETYVDYSSFRA--RGLA-YGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHA 235 (336)
Q Consensus 160 ~~~~~~-~IvDeaY~~f~~~~~--~~l~-~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~a 235 (336)
++.++. +|+||+|.+|..... ..+. ..+++++++||||+||+||+|+||+++++++++.+.+.+.++++|.++|.+
T Consensus 190 ~~~~~~~vI~Deay~~~~~~~~~~~~~~~~~~~~iv~~S~SK~~~l~G~RvG~~~~~~~~i~~~~~~~~~~~~~~~~q~a 269 (369)
T 3cq5_A 190 INVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAA 269 (369)
T ss_dssp HHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCTTCSCHHHHHH
T ss_pred HHHCCCEEEEECCCHHHCCCCCCCHHHHHHCCCEEEECCCCHHHCCCCCEEEEEEECHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 99727689994470764234343415676248589952461432488744899986999999999864876788699999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEE-CCCHHHHHHHHHHCCCEEEECCCCCCCCEEEE
Q ss_conf 99997459999999999999999999999858978616986478865-69889999999876938960778888874788
Q T0636 236 LEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVE-NAAGERTLRFLRERGIQVKDAGQFGLHHHIRI 314 (336)
Q Consensus 236 a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~-~~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRi 314 (336)
+.++|++.+++.+.++++.++|+++.+.|+++|++++|++|+|+|+. .+++..+++.|+++||+||++ |.++|+||
T Consensus 270 ~~~al~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~g~f~~~~~~~~~~~~~~~L~~~gI~vr~~---~~~~~lRi 346 (369)
T 3cq5_A 270 AIVALRHSADTLGTVEKLSVERVRVAARLEELGYAVVPSESNFVFFGDFSDQHAAWQAFLDRGVLIRDV---GIAGHLRT 346 (369)
T ss_dssp HHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHHTCEEECCSSSEEEEECCSSHHHHHHHHHHTTEECBCC---SCTTEEEE
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCHHHHHHHHHHCCEEEECC---CCCCEEEE
T ss_conf 999986809999999999999999999998688988079967999995798999999999799699668---99997999
Q ss_pred EECCHHHHHHHHHHHHHHHHC
Q ss_conf 747989999999999999842
Q T0636 315 SIGREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 315 s~~~~ee~~~l~~aL~~~~e~ 335 (336)
|+|+++|+++++++|+++++.
T Consensus 347 s~~~~ee~~~li~aL~~ilk~ 367 (369)
T 3cq5_A 347 TIGVPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp ECCCHHHHHHHHHHHHHHHTT
T ss_pred EECCHHHHHHHHHHHHHHHHC
T ss_conf 958999999999999999971
No 6
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=0 Score=470.93 Aligned_cols=315 Identities=24% Similarity=0.363 Sum_probs=281.9
Q ss_pred HHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHC-
Q ss_conf 5036655357357654888768999999999875005889861899999999848885438860778899999999846-
Q T0636 10 EVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEFS- 88 (336)
Q Consensus 10 ~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~~- 88 (336)
+..++...|+|++||||+|+|+.+.++ .+++|||+++.+||++||+++|+++|+|++|+|++++|.++++++.
T Consensus 24 ~~~~~~~~i~L~~nenp~~~~~~~~~~------~~~~YPd~~~~~L~~~lA~~~gv~pe~I~~t~G~~eai~~~~~~~~~ 97 (356)
T 1fg7_A 24 RRLGGNGDVWLNANEYPTAVEFQLTQQ------TLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCE 97 (356)
T ss_dssp CCCTTTCSEECSSCCCSSCCCCCCCCC------CTTSCCCSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCC
T ss_pred HHCCCCCCEEEECCCCCCCCCHHHHHH------HHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHHC
T ss_conf 343999967832889789889899999------98439899899999999988784878899958899999999999856
Q ss_pred -C-CCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH-CCHHHHHHHCCCCCCCCCCCHHHHHHHHH---H
Q ss_conf -9-9257638873569999998188036415543567788999730-00243133036633222223799999997---3
Q T0636 89 -S-MRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV-SRDDCVVLANPSNPTGQALSAGELDQLRQ---R 162 (336)
Q Consensus 89 -~-~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~-~~~~~i~l~nPnNPTG~~~~~~~l~~l~~---~ 162 (336)
| |.|+++.|+|..|...++..|++++.+|++++|.+|++++++. .+++++++||||||||.+++.+++++|++ .
T Consensus 98 pG~d~Vl~~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~i~~~~~~ 177 (356)
T 1fg7_A 98 PGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRG 177 (356)
T ss_dssp TTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89839997898607899999983988999313888775999998527897599980898988887887899999999752
Q ss_pred CCCCCCCCCCCCCCCCCC--CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 787202521002588662--003324520012023465233434531311788999999733787787777899999997
Q T0636 163 AGKLLIDETYVDYSSFRA--RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAAL 240 (336)
Q Consensus 163 ~~~~IvDeaY~~f~~~~~--~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~aa~~~l 240 (336)
++++|+||+|.+|.+... ..+..++|+++++||||.||++|+|+||+++++++++.+++.+.+|++|+++|.++.+++
T Consensus 178 ~~~~ivDeay~~f~~~~~~~~~~~~~~~~i~~~s~SK~~gl~GlR~G~~~~~~~~i~~l~~~~~~~~v~~~~~~~a~~~l 257 (356)
T 1fg7_A 178 KAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQAL 257 (356)
T ss_dssp TCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSSCSCHHHHHHHHHHT
T ss_pred CCCEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 79522110487754200134400047871598305214558854404334799999999997287778889999999998
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHCCC--EEECCCCCEEEEECCCHHHHHHHHHHCCCEEEECCCC-CCCCEEEEE
Q ss_conf 459--99999999999999999999985897--8616986478865698899999998769389607788-888747887
Q T0636 241 DND--RAREAHIAKTLAQRRRVADALRGLGY--RVASSEANFVLVENAAGERTLRFLRERGIQVKDAGQF-GLHHHIRIS 315 (336)
Q Consensus 241 ~~~--~~~~~~~~~~~~~r~~l~~~l~~lg~--~~~~s~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~f-g~~~~iRis 315 (336)
.+. .++.+.++++.++|+++.+.|+++|. .++|++|||+|+++++++++++.|.++||+||+++.| ++++|+|||
T Consensus 258 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~~fv~~~~~~~~~~~~~L~~~gi~vr~~~~~~~~~~~lRis 337 (356)
T 1fg7_A 258 SPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRIT 337 (356)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEETTHHHHHHHHHHTTEECEECTTSTTCTTEEEEE
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCHHHHHHHHHHCCCEEECCCCCCCCCCEEEEE
T ss_conf 70587999999999999999999999838995134799874999967999999999996894996277778999989997
Q ss_pred ECCHHHHHHHHHHHH
Q ss_conf 479899999999999
Q T0636 316 IGREEDNDRLLAALA 330 (336)
Q Consensus 316 ~~~~ee~~~l~~aL~ 330 (336)
+||+|||++|+++||
T Consensus 338 ~gt~ee~~~l~~aLk 352 (356)
T 1fg7_A 338 VGTREESQRVIDALR 352 (356)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHH
T ss_conf 089999999999971
No 7
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=0 Score=466.23 Aligned_cols=319 Identities=21% Similarity=0.296 Sum_probs=283.3
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHCCCC
Q ss_conf 36655357357654888768999999999875005889861899999999848885438860778899999999846992
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEFSSMR 91 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~~~~~ 91 (336)
+..+++||+++|+||+|||+.+++++.++++.+++|||+++.+||++||+++|+++|+|++|+|++++|.+++++++||+
T Consensus 12 p~~~~i~dfs~n~~~~~~p~~~~~~l~~~~~~~~~YPd~~~~~Lr~aiA~~~~v~~d~I~it~G~~e~i~~~~~~~~gd~ 91 (350)
T 3fkd_A 12 PLSSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFRGSR 91 (350)
T ss_dssp ----CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTTTCE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHCCCC
T ss_conf 88676646678899999999999999998899742999988999999999978872419984579999999999858997
Q ss_pred EEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHC--CCCCCC
Q ss_conf 576388735699999981880364155435677889997300024313303663322222379999999737--872025
Q T0636 92 FVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRA--GKLLID 169 (336)
Q Consensus 92 vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~--~~~IvD 169 (336)
|++++|+|+.|...++..|..++.+|+++++.- ....+++++++||||||||.+++.+++.+++++. ..+|+|
T Consensus 92 vlv~~P~Y~~y~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~i~l~nPnNPtG~~~s~e~~~~i~~~~~~~~vi~D 166 (350)
T 3fkd_A 92 SLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE-----ADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLD 166 (350)
T ss_dssp EEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG-----SCCTTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEE
T ss_pred EEEECCCHHHHHHHHHHHCCCCEEECCHHHHHH-----HCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
T ss_conf 799678628899999982886413356888987-----423489889983899998664444215579997467628866
Q ss_pred CCCCCCCCCCCC---HHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 210025886620---03324520012023465233434531311788999999733787787777899999997459999
Q T0636 170 ETYVDYSSFRAR---GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAALDNDRAR 246 (336)
Q Consensus 170 eaY~~f~~~~~~---~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~aa~~~l~~~~~~ 246 (336)
|+|.+|...... .+..++|+++++||||+||+||+|+||+++++++++++.+.+.+|+++.+++.++..++.+.+++
T Consensus 167 e~y~~f~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~li~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~ 246 (350)
T 3fkd_A 167 QSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFILIHPAQF 246 (350)
T ss_dssp CTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCTTCSCHHHHHHHHHHHHCTTTT
T ss_pred EEEECCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCHHCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 53210134666660443045764784045321168622145512899999999996697663899999999975222999
Q ss_pred HHHHHHHHHHHHHHHHHHHHC-CCEEECCCCCEEEEECCC--HHHHH-HHHHHCCCEEEECCCCC--CCCEEEEEECCHH
Q ss_conf 999999999999999999858-978616986478865698--89999-99987693896077888--8874788747989
Q T0636 247 EAHIAKTLAQRRRVADALRGL-GYRVASSEANFVLVENAA--GERTL-RFLRERGIQVKDAGQFG--LHHHIRISIGREE 320 (336)
Q Consensus 247 ~~~~~~~~~~r~~l~~~l~~l-g~~~~~s~~~Fi~~~~~~--~~~~~-~~L~~~gi~vr~~~~fg--~~~~iRis~~~~e 320 (336)
.+.++++.++|+++.+.|.+. |++++|++|+|+|+++++ +.+++ +.|.++||+||||+.|+ .++|+|||+++++
T Consensus 247 ~~~~~~~~~~r~~~~~~l~~~~g~~v~p~~~~f~~~~~~~~~~~~~~~~~L~~~gV~v~pg~~f~~~~~~~iRis~~~~e 326 (350)
T 3fkd_A 247 TLPIRKWQRNTVDFITALNRLDGVEVHPSGTTFFLLRLKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQRPA 326 (350)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSTTEEECCCSSSEEEEEESSSCHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCHH
T ss_conf 99999999999999999740489688899855999989999999999999986999999787578889898999837999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999999842
Q T0636 321 DNDRLLAALAEYSDH 335 (336)
Q Consensus 321 e~~~l~~aL~~~~e~ 335 (336)
|+++++++|++++++
T Consensus 327 e~~~~i~aL~~~l~k 341 (350)
T 3fkd_A 327 QNQLFIKALETFLEK 341 (350)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999998
No 8
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134}
Probab=100.00 E-value=0 Score=459.38 Aligned_cols=323 Identities=26% Similarity=0.393 Sum_probs=289.8
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHCCCHH-HEEEECCHHHHHHHHHHHH-
Q ss_conf 36655357357654888768999999999875--0058898618999999998488854-3886077889999999984-
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPFDAEPRVMRKLAEHFSCPED-NLMLVRGIDECFDRISAEF- 87 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~--~~~Ypd~~~~~Lr~aia~~~~v~~d-~I~~t~Gs~~~i~~~~~~~- 87 (336)
.+...+|+|+.|||||||||.+++++.+++.+ +++||++++.+||++||++++.+++ +|++|+|++++|.++++++
T Consensus 27 ~~~~~~i~L~~nenp~~pp~~~~~al~~~~~~~~~~~YP~~~~~~Lr~aiA~~~~~~~~~~i~vt~Ga~~~i~~~~~~~~ 106 (367)
T 3euc_A 27 PDSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAA 106 (367)
T ss_dssp CCCTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTC
T ss_pred CCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHC
T ss_conf 99898189427899999899999999997332211479998689999999998689966516966886144688875214
Q ss_pred -CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHH---HCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH-
Q ss_conf -69925763887356999999818803641554356778899973---0002431330366332222237999999973-
Q T0636 88 -SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQ---VSRDDCVVLANPSNPTGQALSAGELDQLRQR- 162 (336)
Q Consensus 88 -~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~---~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~- 162 (336)
+||.|++++|+|+.|...++..|++++.+|+++++.++.+.+.+ ..+++++++||||||||.+++.+++.++++.
T Consensus 107 ~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~i~~P~NPtG~~~~~~~l~~l~~~~ 186 (367)
T 3euc_A 107 RPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAA 186 (367)
T ss_dssp CTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
T ss_conf 56624885576200110233227861686112444443211000110145542112455554546446888852011123
Q ss_pred --C--C-CCCCCCCCCCCCCCCCCHHH-HCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf --7--8-72025210025886620033-2452001202346523343453131178899999973378778777789999
Q T0636 163 --A--G-KLLIDETYVDYSSFRARGLA-YGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHAL 236 (336)
Q Consensus 163 --~--~-~~IvDeaY~~f~~~~~~~l~-~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~aa 236 (336)
+ . ++++||+|.+|...+...+. ..+++++++|||| ||+||+|+||+++++++++.+++...++.++.+++.++
T Consensus 187 ~~~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~i~~~s~sK-~~l~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~~~ 265 (367)
T 3euc_A 187 QGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSK-LGLAGIRLGYVAGDPQWLEQLDKVRPPYNVNVLTEATA 265 (367)
T ss_dssp BTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCC-TTSCSCCEEEEEECHHHHHHHGGGCCSSCCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 22323333202344320233312101112334322346665-66612001116537999999997336553312220123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCC--CCCEEE
Q ss_conf 9997459999999999999999999999858-9786169864788656988999999987693896077888--887478
Q T0636 237 EAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVASSEANFVLVENAAGERTLRFLRERGIQVKDAGQFG--LHHHIR 313 (336)
Q Consensus 237 ~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~s~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg--~~~~iR 313 (336)
.+++.+.+++++.++.++++|+++.+.|.+. |+++.|++|+|+|++++++.++.+.|+++||+|+||+.|+ .++|+|
T Consensus 266 ~~a~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~p~~~~fl~~~~~~~~~~~~~L~~~gi~v~~~~~f~~~~~~~iR 345 (367)
T 3euc_A 266 LFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLR 345 (367)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSEEEEECSCHHHHHHHHHTTTEECEECGGGCGGGTTEEE
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEE
T ss_conf 44320332222201345666667899999749978889986189996899999999999789289966767888989899
Q ss_pred EEECCHHHHHHHHHHHHHHHHC
Q ss_conf 8747989999999999999842
Q T0636 314 ISIGREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 314 is~~~~ee~~~l~~aL~~~~e~ 335 (336)
||+++++||++|+++|++++++
T Consensus 346 is~~~~~e~~~li~al~~~Lke 367 (367)
T 3euc_A 346 VTVSTPEENAQFLEAFAASLQD 367 (367)
T ss_dssp EECCCHHHHHHHHHHHHHHTCC
T ss_pred EEECCHHHHHHHHHHHHHHHCC
T ss_conf 9838989999999999998378
No 9
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase, cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=0 Score=456.24 Aligned_cols=331 Identities=26% Similarity=0.323 Sum_probs=287.2
Q ss_pred HHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 57897503665535735765488876899999999987500588986189999999984888543886077889999999
Q T0636 5 EAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 5 ~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
++...-..++.++|||+.||||+|||+.+++++.++++++++||++++.+||++||+++++++|+|++|+|+++++.+++
T Consensus 14 ~~~~~~g~~~~~iidls~n~np~~~p~~~~~a~~~~~~~~~~YP~~~~~~Lr~aiA~~~~v~~~~I~i~~gs~~~~~~~~ 93 (364)
T 1lc5_A 14 EPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAGNGETESIFTVA 93 (364)
T ss_dssp HHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHH
T ss_pred HHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHH
T ss_conf 99998098820158856999998889999999998777732799998499999999986978550998865999999985
Q ss_pred HHHCCCCEEECCCCCHHHHHHHHHHCCCEEEECCC--CCCCCCHHHHH-HHCCHHHHHHHCCCCCCCCCCCHHHHHHHH-
Q ss_conf 98469925763887356999999818803641554--35677889997-300024313303663322222379999999-
Q T0636 85 AEFSSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLA-QVSRDDCVVLANPSNPTGQALSAGELDQLR- 160 (336)
Q Consensus 85 ~~~~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~--~~~~~d~~~l~-~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~- 160 (336)
..+.++.++++.|+|+.|.......+..++.+|+. ++|.++.+... ...+++++++||||||||.+++.+++.+|+
T Consensus 94 ~~~~~~~~~i~~p~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~nPnNPtG~~~~~~~l~~l~~ 173 (364)
T 1lc5_A 94 SGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIAD 173 (364)
T ss_dssp HHHCCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred HCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCHHHCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 11489967996798447899999829835798565551789819999747899758998389898664344778777787
Q ss_pred --HHCCC-CCCCCCCCCCCCCCCC---HHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHH-HHHHHHHCCCCCCCCHHHH
Q ss_conf --73787-2025210025886620---033245200120234652334345313117889-9999973378778777789
Q T0636 161 --QRAGK-LLIDETYVDYSSFRAR---GLAYGENELVFRSFSKSYGLAGLRLGALFGPSE-LIAAMKRKQWFCNVGTLDL 233 (336)
Q Consensus 161 --~~~~~-~IvDeaY~~f~~~~~~---~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~-~i~~l~~~~~~~~~~~~~~ 233 (336)
++++. +|+||+|.+|...... .....+|+++++||||+||+||+|+||++++.+ +++.+++.+.+|+++.+++
T Consensus 174 ~a~~~~~~ii~De~y~~f~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~GlR~G~~i~~~~~~~~~~~~~~~~~~~~~~~~ 253 (364)
T 1lc5_A 174 RCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAA 253 (364)
T ss_dssp HHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCTTCSCHHHH
T ss_pred HHHCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCEEEECCCHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHH
T ss_conf 76315206997466553345653322023217752388334445337865238999785999999998518731008999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCCCEEEEECC-CHHHHHHHHHHCCCEEEECCCCCC--C
Q ss_conf 9999997459999999999999999999999858-97861698647886569-889999999876938960778888--8
Q T0636 234 HALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVASSEANFVLVENA-AGERTLRFLRERGIQVKDAGQFGL--H 309 (336)
Q Consensus 234 ~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~s~~~Fi~~~~~-~~~~~~~~L~~~gi~vr~~~~fg~--~ 309 (336)
.++.+++++.+++.+.++.++++|+++.+.|.++ |++++|++|||+|++.+ ++.++++.|+++||+|||++.|+. +
T Consensus 254 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~L~~~gi~v~~~~~f~~~~~ 333 (364)
T 1lc5_A 254 LAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCEREDIDLQRRLLTQRILIRSCANYPGLDS 333 (364)
T ss_dssp HHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESCTTCCHHHHHHTTTEECEECTTSTTCCT
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf 99999960989999999999999899999998569988889987799997899999999999978919984765789999
Q ss_pred CEEEEEECCHHHHHHHHHHHHHHHHC
Q ss_conf 74788747989999999999999842
Q T0636 310 HHIRISIGREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 310 ~~iRis~~~~ee~~~l~~aL~~~~e~ 335 (336)
+|+|||+++++|+++++++|++++++
T Consensus 334 ~~~Ris~~~~ee~~~~l~~L~~il~~ 359 (364)
T 1lc5_A 334 RYYRVAIRSAAQNERLLAALRNVLTG 359 (364)
T ss_dssp TEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHC
T ss_conf 98999838999999999999999866
No 10
>3ly1_A Putative histidinol-phosphate aminotransferase; structural genomics, joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=0 Score=456.49 Aligned_cols=325 Identities=22% Similarity=0.290 Sum_probs=289.0
Q ss_pred HCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--C
Q ss_conf 03665535735765488876899999999987500588986189999999984888543886077889999999984--6
Q T0636 11 VRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--S 88 (336)
Q Consensus 11 ~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~ 88 (336)
....++.|+|++|||||||||.+++|+.+++.++++||++++.+||++||++||+++|+|++|+|++++|..+++++ +
T Consensus 12 ~~~~~~~i~l~~nen~~g~~p~v~~a~~~~~~~~~~Yp~~~~~~Lr~aiA~~~~v~~~~I~it~Ga~~~i~~~~~al~~~ 91 (354)
T 3ly1_A 12 APSTDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASL 91 (354)
T ss_dssp CCCSSSCEECSSCCCSSCCCHHHHHHHHHTGGGTTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCT
T ss_pred CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHCCC
T ss_conf 99999807977899999999999999998667733799976899999999997858688999078999999999997289
Q ss_pred CCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH----CCHHHHHHHCCCCCCCCCCCHHHHHHHHH---
Q ss_conf 99257638873569999998188036415543567788999730----00243133036633222223799999997---
Q T0636 89 SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV----SRDDCVVLANPSNPTGQALSAGELDQLRQ--- 161 (336)
Q Consensus 89 ~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~----~~~~~i~l~nPnNPTG~~~~~~~l~~l~~--- 161 (336)
||.|+++.|+|+.|...++..|.+++.+|+++++++|++++++. .+++++++||||||||.+++.++++.+..
T Consensus 92 Gd~Vi~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~P~nptG~~~~~e~~~~~~~~~~ 171 (354)
T 3ly1_A 92 EAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKP 171 (354)
T ss_dssp TCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCC
T ss_pred CCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98898424446304678985485169973234567320123321135889879998899899987665211355788763
Q ss_pred HCCCCCCCCCCCCCCCCCC---C---HHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 3787202521002588662---0---033245200120234652334345313117889999997337877877778999
Q T0636 162 RAGKLLIDETYVDYSSFRA---R---GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHA 235 (336)
Q Consensus 162 ~~~~~IvDeaY~~f~~~~~---~---~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~a 235 (336)
.+..+|+||+|.+|..... . ....++++++++|+||.||+||+|+||+++++++++.+.+...+++++..++..
T Consensus 172 ~~~~ii~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~l~G~R~G~~i~~~~~i~~l~~~~~~~~~~~~a~~~ 251 (354)
T 3ly1_A 172 ANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDA 251 (354)
T ss_dssp TTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTCSCCCHHHHHH
T ss_pred CCCEEEECHHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 18556630215666437777872665310135604884145422578773479984999999999861789987999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECC-CHHHHHHHHHHCCCEEEECCCCCCCCEEEE
Q ss_conf 9999745999999999999999999999985897861698647886569-889999999876938960778888874788
Q T0636 236 LEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENA-AGERTLRFLRERGIQVKDAGQFGLHHHIRI 314 (336)
Q Consensus 236 a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~-~~~~~~~~L~~~gi~vr~~~~fg~~~~iRi 314 (336)
+.+.+.+..+..+.++.+..+|+++.+.|+++|++++|++|+|+|++.+ ++.++.+.|.++||+|+++.. +.++|+||
T Consensus 252 a~a~~~~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~p~~g~f~~~~~~~~~~~~~~~L~~~gI~v~~~~~-~~~~~lRi 330 (354)
T 3ly1_A 252 ALASMNDSAFITYSKKSNDVSRQILLKALEDLKLPYLPSEGNFVFHQLVVPLKDYQTHMADAGVLIGRAFP-PADNWCRI 330 (354)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCCSSEEEEECSSCHHHHHHHHHHTTEECCCCCT-TCTTEEEE
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEECCCCC-CCCCEEEE
T ss_conf 99982151899998999999999999999988994858986189996899999999999849989877878-99898999
Q ss_pred EECCHHHHHHHHHHHHHHHHCC
Q ss_conf 7479899999999999998429
Q T0636 315 SIGREEDNDRLLAALAEYSDHS 336 (336)
Q Consensus 315 s~~~~ee~~~l~~aL~~~~e~~ 336 (336)
|+++++|+++++++|++|.++|
T Consensus 331 s~~t~ee~~~l~~~l~~~~k~~ 352 (354)
T 3ly1_A 331 SLGTPQEMQWVADTMREFRKKS 352 (354)
T ss_dssp ECCCHHHHHHHHHHHHHHHHTT
T ss_pred EECCHHHHHHHHHHHHHHHHCC
T ss_conf 9389999999999999998512
No 11
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=0 Score=453.74 Aligned_cols=317 Identities=27% Similarity=0.391 Sum_probs=282.8
Q ss_pred HHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHC---CCHHHEEEECCHHHHHH
Q ss_conf 897503665535735765488876899999999987--5005889861899999999848---88543886077889999
Q T0636 7 MDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAA--RINRYPFDAEPRVMRKLAEHFS---CPEDNLMLVRGIDECFD 81 (336)
Q Consensus 7 ~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~--~~~~Ypd~~~~~Lr~aia~~~~---v~~d~I~~t~Gs~~~i~ 81 (336)
+......++++|+|++||||||+|+.+++++.+++. .++.||+.|.++||++||++++ +++|+|++|+|++++|.
T Consensus 11 ~~~~~~~~~d~~~L~~nenp~~~p~~~~~~~~~~~~~~~~~~yp~~g~~~lreaia~~~~~~~~~~d~I~it~Ga~~~l~ 90 (335)
T 1uu1_A 11 AYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIY 90 (335)
T ss_dssp SCCCCCCCCCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHH
T ss_pred CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHEEECCCCHHHHH
T ss_conf 67331168993089899998989999999999985012004789987199999999974556798899673465116777
Q ss_pred HHHHHHCCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99998469925763887356999999818803641554356778899973000243133036633222223799999997
Q T0636 82 RISAEFSSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQ 161 (336)
Q Consensus 82 ~~~~~~~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~ 161 (336)
+++++ +|+|++++|+|+.|...+++.|.+++.+|+++|+..+. ....+++++++||||||||.++++++|.++++
T Consensus 91 ~l~~~--~d~vl~~~P~y~~y~~~~~~~g~~~~~ip~~~d~~~~~---~~~~~~~~~~l~nP~NPtG~~~~~~~l~~~~~ 165 (335)
T 1uu1_A 91 VMMLM--FDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPE---VNVGEGDVVFIPNPNNPTGHVFEREEIERILK 165 (335)
T ss_dssp HHHHH--SSEEEECSSSCHHHHHHHHHHTCEEEECCCCTTSCCCC---CCCCTTEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred HHHHH--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCEEEEECCCCCCCCEEECHHHHHCCCC
T ss_conf 77640--34321112223211222002687422243332222211---24665448864155665322205788511345
Q ss_pred HCCCCCCCCCCCCCCCCCC-CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 3787202521002588662-003324520012023465233434531311788999999733787787777899999997
Q T0636 162 RAGKLLIDETYVDYSSFRA-RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAAL 240 (336)
Q Consensus 162 ~~~~~IvDeaY~~f~~~~~-~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~aa~~~l 240 (336)
.+..+|+||+|.+|..... .....++++++++||||+||+||+|+||+++++++++.++..+.++++|.++|.++.+++
T Consensus 166 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~i~~~~~~~~l~~~~~~~~~s~~~~~~~~~~l 245 (335)
T 1uu1_A 166 TGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVAL 245 (335)
T ss_dssp TTCEEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCTTCSCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf 30588504444100112211233457159999257122002222011102540567778877641032067777776312
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECC--CHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECC
Q ss_conf 45999999999999999999999985897861698647886569--8899999998769389607788888747887479
Q T0636 241 DNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENA--AGERTLRFLRERGIQVKDAGQFGLHHHIRISIGR 318 (336)
Q Consensus 241 ~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~--~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~~ 318 (336)
++.+++++.++.+.++|+++.+.|+++|++++||+|+|+|++.+ +++++.+.|+++||+||++ ++|+|||+|+
T Consensus 246 ~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~g~F~~~~~~~~~~~~~~~~l~~~gI~vr~~-----~~~iRis~g~ 320 (335)
T 1uu1_A 246 DHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSF-----REGVRITIGK 320 (335)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCCSSEEEEECCTHHHHHHHHHHHHHTEEEEEE-----TTEEEEECCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHHHHCCCEECCC-----CCEEEEEECC
T ss_conf 22221146899999989888999998898787898628999899987999999999778889879-----9979998089
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 899999999999998
Q T0636 319 EEDNDRLLAALAEYS 333 (336)
Q Consensus 319 ~ee~~~l~~aL~~~~ 333 (336)
++||++++++||+|+
T Consensus 321 ~~e~~~~~~~lk~fk 335 (335)
T 1uu1_A 321 REENDMILRELEVFK 335 (335)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999859
No 12
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=0 Score=414.38 Aligned_cols=333 Identities=20% Similarity=0.291 Sum_probs=277.5
Q ss_pred CHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCC-CHHHHHHHHHHHH----C--CCHHHEEEE
Q ss_conf 511578975036655357357654888768999999999875-0058898-6189999999984----8--885438860
Q T0636 2 SVGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFD-AEPRVMRKLAEHF----S--CPEDNLMLV 73 (336)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~-~~~~Lr~aia~~~----~--v~~d~I~~t 73 (336)
.+.+.+++....+.++|+|+.|++++++|+.+++++.+++++ .++|++. |.++||++|++++ | +++|+|++|
T Consensus 17 ~i~~~a~~~~~~G~dvi~l~~G~p~~~~p~~v~~a~~~a~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~i~it 96 (388)
T 1j32_A 17 IIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVT 96 (388)
T ss_dssp TTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 99999999987799848999998999988999999999985588778999889999999999988741768881229986
Q ss_pred CCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC--CCCCCCHHHHHHH--CCHHHHHHHCCCCCC
Q ss_conf 77889999999984--69925763887356999999818803641554--3567788999730--002431330366332
Q T0636 74 RGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPT 147 (336)
Q Consensus 74 ~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~--~~~~~d~~~l~~~--~~~~~i~l~nPnNPT 147 (336)
+|++++|.++++++ +||.|++++|+|+.|...++..|.+++.+|+. ++|.+|++++++. .+++++++|||||||
T Consensus 97 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~~v~v~~~~e~~~~~d~~~l~~~~~~~~~~~~l~~P~NPT 176 (388)
T 1j32_A 97 NGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPT 176 (388)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 87899999999998099898999189838799999984998999724555566889999997388898399989998987
Q ss_pred CCCCCHHHHHHH---HHHCCCCCC-CCCCCCCCC--CCCCHH-----HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHH
Q ss_conf 222237999999---973787202-521002588--662003-----324520012023465233434531311788999
Q T0636 148 GQALSAGELDQL---RQRAGKLLI-DETYVDYSS--FRARGL-----AYGENELVFRSFSKSYGLAGLRLGALFGPSELI 216 (336)
Q Consensus 148 G~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~~--~~~~~l-----~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i 216 (336)
|.+++.+++.+| +++++.+|| ||+|.+|.. ....++ ...+|+|+++||||.||+||+|+||++++++++
T Consensus 177 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~~~~~~~i 256 (388)
T 1j32_A 177 GMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLV 256 (388)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHCHHHHEEEEEECHHHH
T ss_conf 70189999999985211069779720310120258988878889588867848999776665248275628899889999
Q ss_pred HHHHHCCC--CCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCC-CCEEEEECC----CHH
Q ss_conf 99973378--77877778999999974-59999999999999999999999858-97861698-647886569----889
Q T0636 217 AAMKRKQW--FCNVGTLDLHALEAALD-NDRAREAHIAKTLAQRRRVADALRGL-GYRVASSE-ANFVLVENA----AGE 287 (336)
Q Consensus 217 ~~l~~~~~--~~~~~~~~~~aa~~~l~-~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~s~-~~Fi~~~~~----~~~ 287 (336)
+.+.+.+. .++++.++|.++..++. ..+++++.++.++++|+.+.+.|+++ |+.+.+++ |.|+|++++ ++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~q~aa~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~~~~~~~~~~~~ 336 (388)
T 1j32_A 257 KAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSL 336 (388)
T ss_dssp HHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGTCCHH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCCCCHH
T ss_conf 99988776336678779999999998645999999999999999999999974799775688835899897888799999
Q ss_pred HHHHHH-HHCCCEEEECCCCCCCCEEEEEECC-HHHHHHHHHHHHHHHH
Q ss_conf 999999-8769389607788888747887479-8999999999999984
Q T0636 288 RTLRFL-RERGIQVKDAGQFGLHHHIRISIGR-EEDNDRLLAALAEYSD 334 (336)
Q Consensus 288 ~~~~~L-~~~gi~vr~~~~fg~~~~iRis~~~-~ee~~~l~~aL~~~~e 334 (336)
++++.| .++||.|+||+.||.++|+|+|++. ++++++.++.|+++++
T Consensus 337 ~~~~~ll~~~gV~v~pG~~F~~~~~iRis~~~~~e~i~~a~~rl~~~l~ 385 (388)
T 1j32_A 337 DFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp HHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 9999999869999982643599996999980899999999999999999
No 13
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus HB8} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=0 Score=403.95 Aligned_cols=334 Identities=22% Similarity=0.294 Sum_probs=272.4
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCC-CHHHHHHHHHHHH------CCCHHHEEEEC
Q ss_conf 11578975036655357357654888768999999999875-0058898-6189999999984------88854388607
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFD-AEPRVMRKLAEHF------SCPEDNLMLVR 74 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~-~~~~Lr~aia~~~------~v~~d~I~~t~ 74 (336)
+.+.+.+....|.++|+|+.+++.+++||.+++++.+++.+ ..+||++ |.++||+++++++ ++++++|++|+
T Consensus 19 i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~ea~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~ 98 (385)
T 1b5p_A 19 VNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTV 98 (385)
T ss_dssp HHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEES
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECC
T ss_conf 99999999977998189999989999889999999999856887899998889999999875432145456833189878
Q ss_pred CHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC--CCCCCCHHHHHHH--CCHHHHHHHCCCCCCC
Q ss_conf 7889999999984--69925763887356999999818803641554--3567788999730--0024313303663322
Q T0636 75 GIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTG 148 (336)
Q Consensus 75 Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~--~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG 148 (336)
|+++++..+++++ +||.|++++|+|+.|...+...|.+++.+++. ++|.+|++++++. .+++++++||||||||
T Consensus 99 G~~~~l~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~i~~P~NPtG 178 (385)
T 1b5p_A 99 GGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178 (385)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTC
T ss_pred CHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 77999999999957996989986898477999999809878999613211457899999973788976999899989756
Q ss_pred CCCCHHHHHHH---HHHCCCCCC-CCCCCCCC--CCCCCHH-HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHH
Q ss_conf 22237999999---973787202-52100258--8662003-32452001202346523343453131178899999973
Q T0636 149 QALSAGELDQL---RQRAGKLLI-DETYVDYS--SFRARGL-AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKR 221 (336)
Q Consensus 149 ~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~--~~~~~~l-~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~ 221 (336)
.+++.+++.+| +++++.+|+ ||+|.+|. +....+. ...+|+|+++||||.||+||+|+||+++++++++.+.+
T Consensus 179 ~~~s~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR~G~~~~~~~~~~~~~~ 258 (385)
T 1b5p_A 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMAS 258 (385)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCHHHCCCCCEEEEECCHHHCCCHHHHEEEEEECHHHHHHHHH
T ss_conf 11799999999999998592899967578622799889977818997799956446433818575999989999999999
Q ss_pred CCC--CCCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCEEECC-CCCEEEEECC----CHHHHH
Q ss_conf 378--778777789999999745999----99999999999999999998589786169-8647886569----889999
Q T0636 222 KQW--FCNVGTLDLHALEAALDNDRA----REAHIAKTLAQRRRVADALRGLGYRVASS-EANFVLVENA----AGERTL 290 (336)
Q Consensus 222 ~~~--~~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~r~~l~~~l~~lg~~~~~s-~~~Fi~~~~~----~~~~~~ 290 (336)
.+. ..+.+.++|.++..++....+ ....++.+..+++.+.+.+...|+++.++ +|+|+|++++ ++..+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~g~~~~~p~gg~f~~~~~~~~~~d~~~~~ 338 (385)
T 1b5p_A 259 VSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAA 338 (385)
T ss_dssp HHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHH
T ss_pred HHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCCCCHHHHH
T ss_conf 98860468967888888887631220057899999999874477887511478557568950799684689999999999
Q ss_pred HHHHHCCCEEEECCCCCCCCEEEEEECC-HHHHHHHHHHHHHHHHCC
Q ss_conf 9998769389607788888747887479-899999999999998429
Q T0636 291 RFLRERGIQVKDAGQFGLHHHIRISIGR-EEDNDRLLAALAEYSDHS 336 (336)
Q Consensus 291 ~~L~~~gi~vr~~~~fg~~~~iRis~~~-~ee~~~l~~aL~~~~e~~ 336 (336)
+.|.++||.++||+.|+.++|+|+|+++ +++++..++.|++++.++
T Consensus 339 ~~L~e~gV~v~PG~~F~~~g~iRis~a~~~e~l~~al~rL~~~L~~a 385 (385)
T 1b5p_A 339 ERLLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGRA 385 (385)
T ss_dssp HHHHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGGC---
T ss_pred HHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 99997897999472258999799997599999999999999998439
No 14
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO2589, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=0 Score=394.51 Aligned_cols=333 Identities=21% Similarity=0.275 Sum_probs=274.8
Q ss_pred CCHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCC-CHHHHHHHHHHHH------CCCHHHEEE
Q ss_conf 9511578975036655357357654888768999999999875-0058898-6189999999984------888543886
Q T0636 1 MSVGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFD-AEPRVMRKLAEHF------SCPEDNLML 72 (336)
Q Consensus 1 ~~~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~-~~~~Lr~aia~~~------~v~~d~I~~ 72 (336)
|.|++++++...+++++|+|+.|+++||||+.+++|+.+++++ ..+||++ |.++||++||+++ .+++|+|++
T Consensus 17 ~~v~~~~~~~~~~g~~vi~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~iii 96 (391)
T 3h14_A 17 MDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVI 96 (391)
T ss_dssp HHHHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEE
T ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 99999999999779975889998899997899999999997469879989858999999999755431485666773599
Q ss_pred ECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCC--CCCHHHHHHHCCHHHHHHHCCCCCCC
Q ss_conf 077889999999984--69925763887356999999818803641554356--77889997300024313303663322
Q T0636 73 VRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDL--LLDPNDLAQVSRDDCVVLANPSNPTG 148 (336)
Q Consensus 73 t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~--~~d~~~l~~~~~~~~i~l~nPnNPTG 148 (336)
|+|+++++.+++.++ +||.|++++|+|+.|...++..|.+++.++.+++. ..+... ....+++++++||||||||
T Consensus 97 t~G~~~al~~~~~~l~~~Gd~Vii~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~~~~~~~l~l~~P~NPtG 175 (391)
T 3h14_A 97 TPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPAD-FAGLDLAGLMVASPANPTG 175 (391)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHH-HTTSCCSEEEEESSCTTTC
T ss_pred EEECCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-CCCCCCEEEEECCCCCCCC
T ss_conf 741200688889986089988999825316899999985998977640333231001222-2333213897336676544
Q ss_pred CCCCHHHHHHH---HHHCCCCCC-CCCCCCCC--CCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHC
Q ss_conf 22237999999---973787202-52100258--8662003324520012023465233434531311788999999733
Q T0636 149 QALSAGELDQL---RQRAGKLLI-DETYVDYS--SFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRK 222 (336)
Q Consensus 149 ~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~--~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~ 222 (336)
.+++.+++.++ +.+++.+|+ ||+|.++. +.....+...+++|+++||||.||+||+|+||+++++++++.+.+.
T Consensus 176 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~i~s~SK~~~~~GlRiG~~i~~~~~i~~~~~~ 255 (391)
T 3h14_A 176 TMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERI 255 (391)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHH
T ss_pred CCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHCEEEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHH
T ss_conf 32221210122012234686431002231012367543452330426898467767887766664112460455666665
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEECCC-CCEEEEECC----CHHHHHHHH-
Q ss_conf 78--778777789999999745999999999999999999999985-897861698-647886569----889999999-
Q T0636 223 QW--FCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRG-LGYRVASSE-ANFVLVENA----AGERTLRFL- 293 (336)
Q Consensus 223 ~~--~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~-lg~~~~~s~-~~Fi~~~~~----~~~~~~~~L- 293 (336)
+. ..+.+.+.|.++.+++.+..++.+.++.+..+++.+.+.+.+ .++.+.+++ |+|+|++++ ++..+++.|
T Consensus 256 ~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~Ll 335 (391)
T 3h14_A 256 AQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEIL 335 (391)
T ss_dssp HHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHH
T ss_conf 41000000017899999873032025789998765444444431112431755888347998989888889999999999
Q ss_pred HHCCCEEEECCCCCC---CCEEEEEECC-HHHHHHHHHHHHHHHH
Q ss_conf 876938960778888---8747887479-8999999999999984
Q T0636 294 RERGIQVKDAGQFGL---HHHIRISIGR-EEDNDRLLAALAEYSD 334 (336)
Q Consensus 294 ~~~gi~vr~~~~fg~---~~~iRis~~~-~ee~~~l~~aL~~~~e 334 (336)
.++||.|+||+.||. ++|+|||+++ +++++..++.|+++++
T Consensus 336 ~~~gV~v~PG~~Fg~~~~~~~iRis~~~~~e~l~ea~~rL~~~l~ 380 (391)
T 3h14_A 336 EKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQ 380 (391)
T ss_dssp HHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred HHCCEEEECCHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 849999984221199889998999973999999999999999999
No 15
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=0 Score=398.15 Aligned_cols=331 Identities=15% Similarity=0.202 Sum_probs=265.9
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCC-CHHHHHHHHHHHHC------CCHHHEEEEC
Q ss_conf 11578975036655357357654888768999999999875-0058898-61899999999848------8854388607
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFD-AEPRVMRKLAEHFS------CPEDNLMLVR 74 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~-~~~~Lr~aia~~~~------v~~d~I~~t~ 74 (336)
+...+++....|+++|+|+.|++.||||+.+++++.+++.+ ..+||++ |.++||++||++++ +++|+|++|+
T Consensus 29 ~~~~a~~~~~~G~dvI~l~~g~p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~it~ 108 (389)
T 1o4s_A 29 LDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTN 108 (389)
T ss_dssp HHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEES
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEC
T ss_conf 99999999977998589999989999889999999999855886889984779999999999999848999844389936
Q ss_pred CHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC--CCCCCCHHHHHHH--CCHHHHHHHCCCCCCC
Q ss_conf 7889999999984--69925763887356999999818803641554--3567788999730--0024313303663322
Q T0636 75 GIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTG 148 (336)
Q Consensus 75 Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~--~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG 148 (336)
|++++|.++++++ +||.|+++.|+|+.|...+...|..+..++.. .++.++.+.++.. .+++++++||||||||
T Consensus 109 G~~~ai~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG 188 (389)
T 1o4s_A 109 GAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTG 188 (389)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTC
T ss_pred CHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 77999999999981998989986897366899999817850024544222356168877653035642788359989888
Q ss_pred CCCCHHHHHHH---HHHCCCCCC-CCCCCCCCC--CCCCHH---HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
Q ss_conf 22237999999---973787202-521002588--662003---324520012023465233434531311788999999
Q T0636 149 QALSAGELDQL---RQRAGKLLI-DETYVDYSS--FRARGL---AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAM 219 (336)
Q Consensus 149 ~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~~--~~~~~l---~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l 219 (336)
.+++.+++.+| +++++.+|+ ||+|.++.. .....+ ..++|+|+++||||+||+||+|+||+++++++++.+
T Consensus 189 ~~~s~~~l~~i~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~ 268 (389)
T 1o4s_A 189 VVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAV 268 (389)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 87899999999998998292999730033101367777754524767868999414201068867665322311679999
Q ss_pred HHCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC-CHHHHHHH-HH
Q ss_conf 73378778--777789999999745999999999999999999999985897861698-647886569-88999999-98
Q T0636 220 KRKQWFCN--VGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA-AGERTLRF-LR 294 (336)
Q Consensus 220 ~~~~~~~~--~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~-~~~~~~~~-L~ 294 (336)
.+.+..++ .+...+.++...++. +.....+.+..+++.+.+.|+++|+++.+++ |+|+|++++ ++.+++.. |.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~gg~fl~~~~~~~~~~~~~~ll~ 346 (389)
T 1o4s_A 269 SKIQSHTTSCINTVAQYAALKALEV--DNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRGDDVKFCERLLE 346 (389)
T ss_dssp HHHHHHHTCSCCHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 9986035511338999999986420--08899999999999999999977976845894079999799997999999999
Q ss_pred HCCCEEEECCCCCCCCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf 769389607788888747887479-89999999999999842
Q T0636 295 ERGIQVKDAGQFGLHHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 295 ~~gi~vr~~~~fg~~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
++||.|+||+.|+.++|+|||+++ +|++++.++.|++++++
T Consensus 347 ~~gV~v~pG~~F~~~g~iRis~~~~~e~l~~al~rL~~~l~~ 388 (389)
T 1o4s_A 347 EKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLNS 388 (389)
T ss_dssp HHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred HCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHC
T ss_conf 699999967325899979999649899999999999999856
No 16
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg, hyperthermophIle; HET: PLP; 2.33A {Pyrococcus furiosus dsm 3638} SCOP: c.67.1.1
Probab=100.00 E-value=0 Score=392.38 Aligned_cols=333 Identities=17% Similarity=0.212 Sum_probs=262.0
Q ss_pred HHHHHHHHHCCCCCCEECCCCCC---CCCCCHHHHHHHHHHHHH-HHCCCCC-CHHHHHHHHHHHH------CCCHHHEE
Q ss_conf 11578975036655357357654---888768999999999875-0058898-6189999999984------88854388
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNEN---PEAVEPRVQAAIAAAAAR-INRYPFD-AEPRVMRKLAEHF------SCPEDNLM 71 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nen---p~~p~~~v~~al~~~~~~-~~~Ypd~-~~~~Lr~aia~~~------~v~~d~I~ 71 (336)
|...+++....|.++|+|+.+++ +|+||+.+++++.+++.+ .++||+. |.++||++||+++ .+++|+|+
T Consensus 26 i~~~a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~i~ 105 (406)
T 1xi9_A 26 VVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVR 105 (406)
T ss_dssp ---CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 99999999977996089989999978999979999999999963899889986799999999997776357765666304
Q ss_pred EECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECC--CCCCCCCHHHHHHH--CCHHHHHHHCCCC
Q ss_conf 6077889999999984--6992576388735699999981880364155--43567788999730--0024313303663
Q T0636 72 LVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL--TDDLLLDPNDLAQV--SRDDCVVLANPSN 145 (336)
Q Consensus 72 ~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~--~~~~~~d~~~l~~~--~~~~~i~l~nPnN 145 (336)
+|+|+++++.+++.++ +||.|++++|+|+.|...+...|.+++.+|+ +++|.+|.+++.+. .+++++++|||||
T Consensus 106 ~t~G~~~~l~~~~~~~~~~Gd~Vl~~~P~Y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~P~N 185 (406)
T 1xi9_A 106 VTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNN 185 (406)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCT
T ss_pred EECCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCC
T ss_conf 51231112101223203799989982783331077898739767997511345866577999997425765899818999
Q ss_pred CCCCCCCHHHHHHH---HHHCCCCCC-CCCCCCCC--CCCCC--HHHHCCCHHHHHHHHHHHCCCCCCCEEECC--CH--
Q ss_conf 32222237999999---973787202-52100258--86620--033245200120234652334345313117--88--
Q T0636 146 PTGQALSAGELDQL---RQRAGKLLI-DETYVDYS--SFRAR--GLAYGENELVFRSFSKSYGLAGLRLGALFG--PS-- 213 (336)
Q Consensus 146 PTG~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~--~~~~~--~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~--~~-- 213 (336)
|||.+++.+++++| +++++.+|+ ||+|.++. ..... .+...+|+|+++||||+|++||+|+||+++ +.
T Consensus 186 PTG~~~s~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~~~~ 265 (406)
T 1xi9_A 186 PTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENK 265 (406)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHCCCCCCCCCCHHHCCCCCCEEEEECCCHHCCCCCCCEECCCCCCHHHH
T ss_conf 74512308999999854422480111231011023334555702117888889995860324054000044112787999
Q ss_pred --HHHHHHHHC-CCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC-CCEEEEECC---
Q ss_conf --999999733-78778777789999999745-99999999999999999999998589-7861698-647886569---
Q T0636 214 --ELIAAMKRK-QWFCNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLG-YRVASSE-ANFVLVENA--- 284 (336)
Q Consensus 214 --~~i~~l~~~-~~~~~~~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~~lg-~~~~~s~-~~Fi~~~~~--- 284 (336)
.+.+.+.+. ...++.+.++|.++..++.+ .+|+++.++.++++|+.+.+.|++++ +.+.+++ |+|+|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~~l~~~L~~~~~~~~~~p~gg~~l~~~l~~~~ 345 (406)
T 1xi9_A 266 LSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGP 345 (406)
T ss_dssp THHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCS
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCC
T ss_conf 99999999997247878888999999998608699999999999999999999998669941048985479817778889
Q ss_pred --CHHHHH-HHHHHCCCEEEECCCCCC--CCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf --889999-999876938960778888--8747887479-89999999999999842
Q T0636 285 --AGERTL-RFLRERGIQVKDAGQFGL--HHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 --~~~~~~-~~L~~~gi~vr~~~~fg~--~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
++.+.+ +.|.++||+|+||+.||. ++|+|||+++ +++++..++.|++++++
T Consensus 346 ~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~iRis~~~~~e~l~~a~~rl~~~l~e 402 (406)
T 1xi9_A 346 WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp CSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 999999999999979999984734288998979999738999999999999999999
No 17
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=0 Score=382.24 Aligned_cols=327 Identities=17% Similarity=0.246 Sum_probs=261.0
Q ss_pred HHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH--HHHCCCCC-CHHHHHHHHHHHHC------CCHHHEEEECCHHHH
Q ss_conf 7503665535735765488876899999999987--50058898-61899999999848------885438860778899
Q T0636 9 TEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAA--RINRYPFD-AEPRVMRKLAEHFS------CPEDNLMLVRGIDEC 79 (336)
Q Consensus 9 ~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~--~~~~Ypd~-~~~~Lr~aia~~~~------v~~d~I~~t~Gs~~~ 79 (336)
+....++++|+|+.+++.|+||+.+++++.+++. ..++|++. |.++||++||++++ +++|+|++|+|++++
T Consensus 51 ~~~~~g~~vi~L~~G~pd~~~p~~~~~a~~~a~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~e~I~vt~G~~~a 130 (447)
T 3b46_A 51 NSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG 130 (447)
T ss_dssp C---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred HHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHH
T ss_conf 99976998688999989999999999999999758877888998476999999999998986889885439994799999
Q ss_pred HHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC------------CCCCCCHHHHHHH--CCHHHHHHHCC
Q ss_conf 99999984--69925763887356999999818803641554------------3567788999730--00243133036
Q T0636 80 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT------------DDLLLDPNDLAQV--SRDDCVVLANP 143 (336)
Q Consensus 80 i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~------------~~~~~d~~~l~~~--~~~~~i~l~nP 143 (336)
|.+++.++ +||+|++++|+|+.|...++..|.+++.+|++ ++|.+|++++++. .++++++++||
T Consensus 131 l~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~G~~~v~vpl~~~~~~~~~~~~~~~~~~d~e~le~~i~~~~~~ii~~~p 210 (447)
T 3b46_A 131 ILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTP 210 (447)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESS
T ss_pred HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCC
T ss_conf 99999997399698998689848999999980995899956753223322343334587999999752368828996899
Q ss_pred CCCCCCCCCHHHHHH---HHHHCCCCCC-CCCCCCCC--CCCC--CH--HHHCCCHHHHHHHHHHHCCCCCCCEEECC-C
Q ss_conf 633222223799999---9973787202-52100258--8662--00--33245200120234652334345313117-8
Q T0636 144 SNPTGQALSAGELDQ---LRQRAGKLLI-DETYVDYS--SFRA--RG--LAYGENELVFRSFSKSYGLAGLRLGALFG-P 212 (336)
Q Consensus 144 nNPTG~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~--~~~~--~~--l~~~~n~iv~~S~SK~~gl~GlRiG~~i~-~ 212 (336)
|||||.+++.+++.+ ++++++.+|| ||+|.+|. +... .. ....+++++++||||+||+||||+||+++ +
T Consensus 211 ~NPtG~~~~~~~~~~l~~~a~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ii~~~ 290 (447)
T 3b46_A 211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLN 290 (447)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECC
T ss_conf 89888543299999999975204125420012344214875531265334552169998557434568862213789668
Q ss_pred HHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC-CEEEEECC--
Q ss_conf 899999973378--7787777899999997459---999999999999999999999858978616986-47886569--
Q T0636 213 SELIAAMKRKQW--FCNVGTLDLHALEAALDND---RAREAHIAKTLAQRRRVADALRGLGYRVASSEA-NFVLVENA-- 284 (336)
Q Consensus 213 ~~~i~~l~~~~~--~~~~~~~~~~aa~~~l~~~---~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~-~Fi~~~~~-- 284 (336)
+++++.+.+... .++.+++.|.++..++.+. .++++.++.+.++|+.+.+.|+++|+++.+++| .|+|++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~r~~~~~r~~~l~~~L~~~g~~~~~p~gg~~~~~d~~~~ 370 (447)
T 3b46_A 291 AELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKV 370 (447)
T ss_dssp HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTC
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCC
T ss_conf 99999999998751357878999999999975225469999999999999999999986898465588324998866345
Q ss_pred ----------------CHHHHHHH-HHHCCCEEEECCCCCC-------CCEEEEEECCH-HHHHHHHHHHHHHHHC
Q ss_conf ----------------88999999-9876938960778888-------87478874798-9999999999999842
Q T0636 285 ----------------AGERTLRF-LRERGIQVKDAGQFGL-------HHHIRISIGRE-EDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 ----------------~~~~~~~~-L~~~gi~vr~~~~fg~-------~~~iRis~~~~-ee~~~l~~aL~~~~e~ 335 (336)
++.+++.. |.++||.+.||+.|+. ++|||||++++ ++++..++.|+.++|+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~Ll~e~gV~v~PGs~F~~~~~~~~~~~~iRis~~~~~e~l~~a~~rL~~l~~y 446 (447)
T 3b46_A 371 KIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLLKDY 446 (447)
T ss_dssp CCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHHGGGGGTT
T ss_pred CCCCCHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 8863113577761235489999999996899997435516788777779989999659899999999999999963
No 18
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=0 Score=376.64 Aligned_cols=327 Identities=17% Similarity=0.232 Sum_probs=263.8
Q ss_pred CHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCC-CHHHHHHHHHHHH------CCCHHHEEEE
Q ss_conf 511578975036655357357654888768999999999875-0058898-6189999999984------8885438860
Q T0636 2 SVGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFD-AEPRVMRKLAEHF------SCPEDNLMLV 73 (336)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~-~~~~Lr~aia~~~------~v~~d~I~~t 73 (336)
.+.+.+++....|..+|+|+.++++||+|+.+++|+.+++.+ .++||++ |.++||+++|+++ ++++|+|++|
T Consensus 16 ~~~~~a~~l~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~l~~~~~~Y~~~~G~~~lR~~ia~~~~~~~~~~~~~~~i~~t 95 (370)
T 2z61_A 16 DILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIIT 95 (370)
T ss_dssp HHHHHHHHHHHTTCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEE
T ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC
T ss_conf 99999999996699828999998999888999999999985488789999788999999999888745988994516865
Q ss_pred CCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCC
Q ss_conf 77889999999984--699257638873569999998188036415543567788999730--00243133036633222
Q T0636 74 RGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQ 149 (336)
Q Consensus 74 ~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~ 149 (336)
+|++++|.++++++ +||+|++++|+|+.|...++..|.+++.+++ |++++++. .+++++++||||||||.
T Consensus 96 ~G~~~al~~~~~~l~~pGd~vl~~~P~y~~~~~~~~~~g~~~~~~~~------d~e~l~~~l~~~~~~v~l~nP~NPtG~ 169 (370)
T 2z61_A 96 GGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCDF------TVESLEEALSDKTKAIIINSPSNPLGE 169 (370)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECS------SHHHHHHHCCSSEEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCC------CHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf 78899999999985799398998889827799999970871465679------999999861038838998299899987
Q ss_pred CCCHHHHHHHHHHCCCCC-CCCCCCCCCCCCC--CH---HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC
Q ss_conf 223799999997378720-2521002588662--00---33245200120234652334345313117889999997337
Q T0636 150 ALSAGELDQLRQRAGKLL-IDETYVDYSSFRA--RG---LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ 223 (336)
Q Consensus 150 ~~~~~~l~~l~~~~~~~I-vDeaY~~f~~~~~--~~---l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~ 223 (336)
+++.+ +.+++++++.+| .||+|.++..... .+ ....+|+++++||||+||+||+|+||+++++++++.+.+..
T Consensus 170 ~~s~e-~~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~~~~~~ 248 (370)
T 2z61_A 170 VIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQ 248 (370)
T ss_dssp CCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHH
T ss_pred CCHHH-HHHHHHHHCCCEEEEEEEEHHCCCCCCCCEEEECCCCCCEEEEECCCHHCCCCCCEEECCCCCHHHHHHHHHHH
T ss_conf 66289-99999850486799863110013788765023057778189994580324466022432325357789999987
Q ss_pred CC--CCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC-CHHHHHHH-HHHC
Q ss_conf 87--78777789999999745--999999999999999999999985897861698-647886569-88999999-9876
Q T0636 224 WF--CNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA-AGERTLRF-LRER 296 (336)
Q Consensus 224 ~~--~~~~~~~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~-~~~~~~~~-L~~~ 296 (336)
.. .+.+...+.++..++.. ..+....++.+.+.++.+.+.|++.|+++.+++ |+|+|++++ ++.++.+. |.++
T Consensus 249 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~gg~f~~~~~~~~~~~~~~~ll~~~ 328 (370)
T 2z61_A 249 QNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGEDGREFAYKLLKEK 328 (370)
T ss_dssp HHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSSCHHHHHHHHHHHH
T ss_pred HCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCCHHHHHHHHHHHC
T ss_conf 41233311599999999987065899999999998656789999986595762688038999858999999999999859
Q ss_pred CCEEEECCCCCC--CCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf 938960778888--8747887479-89999999999999842
Q T0636 297 GIQVKDAGQFGL--HHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 297 gi~vr~~~~fg~--~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
||.++||+.|+. ++|+|||+++ +|+++..++.|++++++
T Consensus 329 gV~v~pG~~F~~~~~~~iRis~~~~~e~l~~al~rL~~~l~k 370 (370)
T 2z61_A 329 FVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFLNK 370 (370)
T ss_dssp CEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHHHHHC-
T ss_pred CEEEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 999981522088998979999729899999999999999776
No 19
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, lyase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=0 Score=371.24 Aligned_cols=322 Identities=19% Similarity=0.276 Sum_probs=259.2
Q ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHH---HHCCCCC-CHHHHHHHHHHHH----C--CCH-HHEEEECCHHHHHHH
Q ss_conf 655357357654888768999999999875---0058898-6189999999984----8--885-438860778899999
Q T0636 14 AAQAVCLAFNENPEAVEPRVQAAIAAAAAR---INRYPFD-AEPRVMRKLAEHF----S--CPE-DNLMLVRGIDECFDR 82 (336)
Q Consensus 14 ~~~~i~L~~Nenp~~p~~~v~~al~~~~~~---~~~Ypd~-~~~~Lr~aia~~~----~--v~~-d~I~~t~Gs~~~i~~ 82 (336)
.+++|+|+.+++.++||+.+++++++++.+ .++|++. |+++||++||+++ | ++| ++|++|+|++++|.+
T Consensus 27 ~~dvI~l~~G~pd~~~p~~v~~a~~~a~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~p~~~I~it~G~~~al~~ 106 (422)
T 3fvs_A 27 EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFT 106 (422)
T ss_dssp TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHH
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHC
T ss_conf 99988888988999889999999999985797446889986789999999999999858998810116643586045303
Q ss_pred HHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC------------CCCCCCHHHHHHH--CCHHHHHHHCCCCC
Q ss_conf 99984--69925763887356999999818803641554------------3567788999730--00243133036633
Q T0636 83 ISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT------------DDLLLDPNDLAQV--SRDDCVVLANPSNP 146 (336)
Q Consensus 83 ~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~------------~~~~~d~~~l~~~--~~~~~i~l~nPnNP 146 (336)
++.++ +||.|++++|+|+.|...+...|..++.++.. ++|.+|.+++.+. .+++++++||||||
T Consensus 107 ~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~l~~p~NP 186 (422)
T 3fvs_A 107 AFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNP 186 (422)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTT
T ss_pred CHHHCCCCCCEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCC
T ss_conf 11210479973640455540168999974987501356654222344331121022344310100013441240577765
Q ss_pred CCCCCCHHHHHHH---HHHCCCCC-CCCCCCCCC--CCCCCHH---H-HCCCHHHHHHHHHHHCCCCCCCEEECCCHHHH
Q ss_conf 2222237999999---97378720-252100258--8662003---3-24520012023465233434531311788999
Q T0636 147 TGQALSAGELDQL---RQRAGKLL-IDETYVDYS--SFRARGL---A-YGENELVFRSFSKSYGLAGLRLGALFGPSELI 216 (336)
Q Consensus 147 TG~~~~~~~l~~l---~~~~~~~I-vDeaY~~f~--~~~~~~l---~-~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i 216 (336)
||.+++++++.+| +++++.+| +||+|.+|. +....++ . ..+|+++++||||.|++||+|+||++++++++
T Consensus 187 tG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~i~~~~~i 266 (422)
T 3fvs_A 187 LGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIM 266 (422)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCEECCCCCCCCC
T ss_conf 45668999999999998864975222335677615898987853355654661232557807889977540212444422
Q ss_pred HHHHHCC--CCCCCCHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC-
Q ss_conf 9997337--877877778999999974599--------9999999999999999999985897861698-647886569-
Q T0636 217 AAMKRKQ--WFCNVGTLDLHALEAALDNDR--------AREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA- 284 (336)
Q Consensus 217 ~~l~~~~--~~~~~~~~~~~aa~~~l~~~~--------~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~- 284 (336)
+.+.+.+ ..+++++++|.++..++.+.. ++...++.+.+.|+.+.+.|+++|+++.+++ |+|+|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~gg~f~~~~~~~ 346 (422)
T 3fvs_A 267 KHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISD 346 (422)
T ss_dssp HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECCC
T ss_conf 22232333332332210036789987622233333433223310110001103555555522644489832399897733
Q ss_pred ---------------CHHHHHH-HHHHCCCEEEECCCCC-------CCCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf ---------------8899999-9987693896077888-------88747887479-89999999999999842
Q T0636 285 ---------------AGERTLR-FLRERGIQVKDAGQFG-------LHHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 ---------------~~~~~~~-~L~~~gi~vr~~~~fg-------~~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
++.++++ .|+++||.+.||+.|+ .++|+|||+++ ++++++.+++|++|.++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~~~~e~l~~a~~rL~~~~~~ 421 (422)
T 3fvs_A 347 FKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 123320001345553599999999997999998454525787767779979999648999999999999999975
No 20
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalanine catabolism; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=0 Score=372.52 Aligned_cols=329 Identities=19% Similarity=0.248 Sum_probs=259.0
Q ss_pred HHHHHCCCCCCEECCCCCC----CCCCCHHHHHHHHHHHHH--HHCCCC-CCHHHHHHHHHHHHC-----CCHHHEEEEC
Q ss_conf 8975036655357357654----888768999999999875--005889-861899999999848-----8854388607
Q T0636 7 MDTEVRAAAQAVCLAFNEN----PEAVEPRVQAAIAAAAAR--INRYPF-DAEPRVMRKLAEHFS-----CPEDNLMLVR 74 (336)
Q Consensus 7 ~~~~~~~~~~~i~L~~Nen----p~~p~~~v~~al~~~~~~--~~~Ypd-~~~~~Lr~aia~~~~-----v~~d~I~~t~ 74 (336)
++....+.+++|+|+.+++ .|+|||.+++++.+++.+ .++|++ .|.++||++||++++ +++|+|++|+
T Consensus 46 ~~~~~~~~k~iI~l~~G~P~~~~d~~~~~~v~~a~~~a~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~I~it~ 125 (427)
T 3dyd_A 46 MKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTS 125 (427)
T ss_dssp -CCCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEES
T ss_pred HCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEC
T ss_conf 60677999985789488889878999999999999999738987888998670999999999973438998843499948
Q ss_pred CHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC--CCCCCCHHHHHHH--CCHHHHHHHCCCCCCC
Q ss_conf 7889999999984--69925763887356999999818803641554--3567788999730--0024313303663322
Q T0636 75 GIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTG 148 (336)
Q Consensus 75 Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~--~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG 148 (336)
|++++|.++++++ +||.|++++|+|+.|...++..|.+++.+++. ++|.+|++++++. .++++++++|||||||
T Consensus 126 G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~iil~~p~NPtG 205 (427)
T 3dyd_A 126 GCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCG 205 (427)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTC
T ss_pred CHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf 99999999999967896989991897389999999839857885156666767699999974225825886268889877
Q ss_pred CCCCHHHHHH---HHHHCCCCCC-CCCCCCCC--CCCCC---HHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHH-----
Q ss_conf 2223799999---9973787202-52100258--86620---033245200120234652334345313117889-----
Q T0636 149 QALSAGELDQ---LRQRAGKLLI-DETYVDYS--SFRAR---GLAYGENELVFRSFSKSYGLAGLRLGALFGPSE----- 214 (336)
Q Consensus 149 ~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~--~~~~~---~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~----- 214 (336)
.+++.+++.+ ++++++.+|+ ||+|.+|. +.... .+....++|+++||||.|++||+|+||++++++
T Consensus 206 ~~~s~~~l~~i~~la~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~R~G~~~~~~~~~~~~ 285 (427)
T 3dyd_A 206 SVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG 285 (427)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEECCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCEEEEEECCHHHHHH
T ss_conf 43307889999998752156500132211111289876707874334674178236556568350859999754788889
Q ss_pred --HHHHHHHCC-CCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEC-CCCCEEEEECC---
Q ss_conf --999997337-877877778999999974--59999999999999999999999858-978616-98647886569---
Q T0636 215 --LIAAMKRKQ-WFCNVGTLDLHALEAALD--NDRAREAHIAKTLAQRRRVADALRGL-GYRVAS-SEANFVLVENA--- 284 (336)
Q Consensus 215 --~i~~l~~~~-~~~~~~~~~~~aa~~~l~--~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~-s~~~Fi~~~~~--- 284 (336)
+.+.+.+.. ...+.+.+.|.++.+++. ..+++++.++.++++|+.+.+.|+++ |+++.. .+|+|+|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~P~g~~~~~~~i~~~~ 365 (427)
T 3dyd_A 286 NEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEH 365 (427)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGG
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCC
T ss_conf 99999999986422687469999999998658199999999999999999999997389967706897359988677444
Q ss_pred -----CHHHHHHHH-HHCCCEEEECCCCCCCCEEEEEECCH-HHHHHHHHHHHHHHHC
Q ss_conf -----889999999-87693896077888887478874798-9999999999999842
Q T0636 285 -----AGERTLRFL-RERGIQVKDAGQFGLHHHIRISIGRE-EDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 -----~~~~~~~~L-~~~gi~vr~~~~fg~~~~iRis~~~~-ee~~~l~~aL~~~~e~ 335 (336)
++.++++.| .++||.+.||+.|+.++|+|||++++ ++++..++.|++|+++
T Consensus 366 ~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~iRis~~~~~e~l~eal~rl~~~~~~ 423 (427)
T 3dyd_A 366 FPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp CTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 7888899999999999699999817757998979999648999999999999999997
No 21
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=0 Score=375.71 Aligned_cols=332 Identities=20% Similarity=0.213 Sum_probs=261.7
Q ss_pred HHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHH----C--CCHHHEEEECCH
Q ss_conf 15789750366553573576548887689999999998750058898-6189999999984----8--885438860778
Q T0636 4 GEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFD-AEPRVMRKLAEHF----S--CPEDNLMLVRGI 76 (336)
Q Consensus 4 ~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~-~~~~Lr~aia~~~----~--v~~d~I~~t~Gs 76 (336)
.+..++..+.+.++|+|+.+++.||||+.+++++.++..+..+||+. |.++||++||+|+ | +++|+|++|+|+
T Consensus 32 ~~~~~~~~~~g~~vi~l~~G~P~~~~p~~i~~al~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~d~Ivit~Gs 111 (409)
T 2gb3_A 32 VPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGG 111 (409)
T ss_dssp HHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHH
T ss_pred HHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCH
T ss_conf 99999999769987889898889998799999999607778789998678999999999999985899881019993880
Q ss_pred HHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHH-HHHH--HCCHHHHHHHCCCCCCCCCC
Q ss_conf 89999999984--6992576388735699999981880364155435677889-9973--00024313303663322222
Q T0636 77 DECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPN-DLAQ--VSRDDCVVLANPSNPTGQAL 151 (336)
Q Consensus 77 ~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~-~l~~--~~~~~~i~l~nPnNPTG~~~ 151 (336)
+++|.++++++ +||.|+++.|+|+.|...+...|..++.++.+++...+.+ .+.+ ..+++++++||||||||.++
T Consensus 112 ~~~l~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~NPtG~~~ 191 (409)
T 2gb3_A 112 SEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVY 191 (409)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf 48889998741689998997787653200000026841103453445554667999986314852999889989987442
Q ss_pred CHHHHHHH---HHHCCCCCC-CCCCCCCCC--CCCCHH-HHCCCHHHHHHHHHHHCCCCCCCEEECCCHH-HHHHHHHCC
Q ss_conf 37999999---973787202-521002588--662003-3245200120234652334345313117889-999997337
Q T0636 152 SAGELDQL---RQRAGKLLI-DETYVDYSS--FRARGL-AYGENELVFRSFSKSYGLAGLRLGALFGPSE-LIAAMKRKQ 223 (336)
Q Consensus 152 ~~~~l~~l---~~~~~~~Iv-DeaY~~f~~--~~~~~l-~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~-~i~~l~~~~ 223 (336)
+.+++.+| +++++.+|| ||+|.+|.. ...... ...+++++++|+||.|++||+|+||++++++ +++.+.+..
T Consensus 192 s~~~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~ivi~s~sK~~~~pGlRiG~~~~~~~~i~~~~~~~~ 271 (409)
T 2gb3_A 192 GKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLA 271 (409)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHC
T ss_conf 28999999999998891899967854224689877755542575179705776666888647999448799999998751
Q ss_pred -CCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCE-E-ECCCCCEEEEECC--CHHHHHHHHHH--
Q ss_conf -8778777789999999745-9999999999999999999999858978-6-1698647886569--88999999987--
Q T0636 224 -WFCNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLGYR-V-ASSEANFVLVENA--AGERTLRFLRE-- 295 (336)
Q Consensus 224 -~~~~~~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~~lg~~-~-~~s~~~Fi~~~~~--~~~~~~~~L~~-- 295 (336)
..++.+.+.|.++..++.. ..+++..++.++++|+.+.+.|+++|+. + .|++|+|+|++++ +++++.+.|.+
T Consensus 272 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~p~gg~fl~~~lp~~~~~~~~~~ll~e~ 351 (409)
T 2gb3_A 272 QGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAEEFARWMLTDF 351 (409)
T ss_dssp HHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 26777518999999999858836799999999999999999998669955258881269999589999999999999860
Q ss_pred ----CCCEEEECCCCCC-----CCEEEEEECCHHH-----HHHHHHHHHHHHHC
Q ss_conf ----6938960778888-----8747887479899-----99999999999842
Q T0636 296 ----RGIQVKDAGQFGL-----HHHIRISIGREED-----NDRLLAALAEYSDH 335 (336)
Q Consensus 296 ----~gi~vr~~~~fg~-----~~~iRis~~~~ee-----~~~l~~aL~~~~e~ 335 (336)
+||.|+|++.|+. ++|+|||++.+++ +++|.++|++|++.
T Consensus 352 ~l~~~~v~v~pg~~f~~~~~~g~~~iRis~~~~~e~l~~a~~rL~~~lk~~~~~ 405 (409)
T 2gb3_A 352 NMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCSS 405 (409)
T ss_dssp CBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 364297899947501568988899899996389999999999999999999984
No 22
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C- terminal domain, open alpha-beta structure.; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=0 Score=366.69 Aligned_cols=323 Identities=15% Similarity=0.164 Sum_probs=249.5
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHH------CCCHHHEEEECCHHHHHHHHH
Q ss_conf 36655357357654888768999999999875-00588986189999999984------888543886077889999999
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFDAEPRVMRKLAEHF------SCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~~~~~Lr~aia~~~------~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
.+.+.+|.|+..+..|||||.+++|+.+++.+ ..+||+.++++||++||+++ .+++|+|++|+|++++|.+++
T Consensus 25 ~~~~dvi~l~igd~df~~p~~i~~al~~a~~~~~~~Y~~~~g~~lr~aia~~~~~~~g~~~~~e~i~vt~G~~~al~~~~ 104 (390)
T 1d2f_A 25 FGTADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELI 104 (390)
T ss_dssp -----CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHH
T ss_conf 69998787258896999989999999999967998998998989999999999998688988213998744999999999
Q ss_pred HHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC---CCCCCCHHHHHHH---CCHHHHHHHCCCCCCCCCCCHHHH
Q ss_conf 984--69925763887356999999818803641554---3567788999730---002431330366332222237999
Q T0636 85 AEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT---DDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGEL 156 (336)
Q Consensus 85 ~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~---~~~~~d~~~l~~~---~~~~~i~l~nPnNPTG~~~~~~~l 156 (336)
+++ +||.|++++|+|+.|...++..|..+++++.+ ++|.+|.+++... .++|++++||||||||.+++.+++
T Consensus 105 ~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~~d~~~~~~~~~~~~~k~i~l~~P~NPTG~v~s~~~l 184 (390)
T 1d2f_A 105 RQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDEL 184 (390)
T ss_dssp HHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHH
T ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEECCHHHH
T ss_conf 99808998788668885025899997187588400136788765798999998617896699989987987665069999
Q ss_pred HHH---HHHCCCCCC-CCCCCCCC--CCCCCHHH--HCCCHHHHHHHHHHHCCCCCCCEEECCC-HHHHH-HHHHCCC--
Q ss_conf 999---973787202-52100258--86620033--2452001202346523343453131178-89999-9973378--
Q T0636 157 DQL---RQRAGKLLI-DETYVDYS--SFRARGLA--YGENELVFRSFSKSYGLAGLRLGALFGP-SELIA-AMKRKQW-- 224 (336)
Q Consensus 157 ~~l---~~~~~~~Iv-DeaY~~f~--~~~~~~l~--~~~n~iv~~S~SK~~gl~GlRiG~~i~~-~~~i~-~l~~~~~-- 224 (336)
.+| +++++.+|| ||+|.+|. +....++. ..+|+++++|+||+|++||+|+||++.+ +..+. .+.+.+.
T Consensus 185 ~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR~G~~~~~~~~~~~~~~~~~~~~~ 264 (390)
T 1d2f_A 185 EIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRD 264 (390)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTS
T ss_pred HHHHHCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCC
T ss_conf 98642000022367630553300005776451444201431430466655565756530278528689999999876504
Q ss_pred -CCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC--CCEEECCC-CCEEEEECC----CHHHHHHHH-H
Q ss_conf -778777789999999745-9999999999999999999999858--97861698-647886569----889999999-8
Q T0636 225 -FCNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGL--GYRVASSE-ANFVLVENA----AGERTLRFL-R 294 (336)
Q Consensus 225 -~~~~~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~~l--g~~~~~s~-~~Fi~~~~~----~~~~~~~~L-~ 294 (336)
..+.+..++.++..++.. ..++++.++.++++|+.+.+.|+.. |+.+.+++ |.|+|++++ ++.++.+.| .
T Consensus 265 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~gg~~~~~~l~~~~~d~~~~~~~ll~ 344 (390)
T 1d2f_A 265 GLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIE 344 (390)
T ss_dssp CCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHH
T ss_conf 67775389999999987344112223567799999999999996489872635884139989777899999999999998
Q ss_pred HCCCEEEECCCCCC--CCEEEEEECCH-HHHHHHHHHHHHHHH
Q ss_conf 76938960778888--87478874798-999999999999984
Q T0636 295 ERGIQVKDAGQFGL--HHHIRISIGRE-EDNDRLLAALAEYSD 334 (336)
Q Consensus 295 ~~gi~vr~~~~fg~--~~~iRis~~~~-ee~~~l~~aL~~~~e 334 (336)
++||.|+||+.||. ++|+|||++++ +++++.++.|+++.+
T Consensus 345 ~~gV~v~PG~~Fg~~~~~~iRis~~~~~e~l~~al~rl~~~l~ 387 (390)
T 1d2f_A 345 QEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIR 387 (390)
T ss_dssp TTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred HCCEEEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 6999998362318899987999973889999999999999999
No 23
>2dou_A Probable N-succinyldiaminopimelate aminotransferase; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus HB8}
Probab=100.00 E-value=0 Score=372.69 Aligned_cols=331 Identities=21% Similarity=0.234 Sum_probs=264.0
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH--HHCCCCC-CHHHHHHHHHHHH----CC---CHHHEEE
Q ss_conf 11578975036655357357654888768999999999875--0058898-6189999999984----88---8543886
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPFD-AEPRVMRKLAEHF----SC---PEDNLML 72 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~--~~~Ypd~-~~~~Lr~aia~~~----~v---~~d~I~~ 72 (336)
|.+..++....|+++|+|+.+++.++||+.+++++.+++.+ .++||++ |..++|++|++++ |+ ++++|++
T Consensus 13 i~~~~~~~~~~G~~ii~l~~G~p~~~~p~~v~~a~~~al~~~~~~~Y~~~~G~~~~r~aia~~~~~~~~~~~~~~~~i~~ 92 (376)
T 2dou_A 13 VDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALA 92 (376)
T ss_dssp HHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEE
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEE
T ss_conf 99999999977998398889999999899999999999858776687998799899999997567751865346730799
Q ss_pred ECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCC
Q ss_conf 077889999999984--699257638873569999998188036415543567788999730--0024313303663322
Q T0636 73 VRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTG 148 (336)
Q Consensus 73 t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG 148 (336)
|+|++++|..+++++ +||.|++++|+|..|...++..|.+.+.++.++++..|++.+++. .+++++++||||||||
T Consensus 93 t~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~l~nP~NPtG 172 (376)
T 2dou_A 93 LIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTG 172 (376)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTC
T ss_pred EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 50321014445566325544355764222222223311000122222223335637888887533552588414456512
Q ss_pred CCCCHHHHHHH---HHHCCCCC-CCCCCCCCCC--CCCC---HHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
Q ss_conf 22237999999---97378720-2521002588--6620---03324520012023465233434531311788999999
Q T0636 149 QALSAGELDQL---RQRAGKLL-IDETYVDYSS--FRAR---GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAM 219 (336)
Q Consensus 149 ~~~~~~~l~~l---~~~~~~~I-vDeaY~~f~~--~~~~---~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l 219 (336)
.+++++++.+| +++++.+| +||+|.+|.. .... .....+|+|+++||||+||+||+|+||+++++++++.+
T Consensus 173 ~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~ 252 (376)
T 2dou_A 173 AVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARL 252 (376)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCEEEEEECCHHHHCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44658889999998764427887520011113345677455431666768998269752648764544233432222210
Q ss_pred HHCCCCCC--CCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC---CHHHHHHH
Q ss_conf 73378778--77778999999974-5999999999999999999999985897861698-647886569---88999999
Q T0636 220 KRKQWFCN--VGTLDLHALEAALD-NDRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA---AGERTLRF 292 (336)
Q Consensus 220 ~~~~~~~~--~~~~~~~aa~~~l~-~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~---~~~~~~~~ 292 (336)
.+.+..++ .++..+.++...+. ...+..+..+.....+..+.+.|++. +.+.+++ |+|+|++++ ++.++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~p~gg~~~~~~~~~~~~~~~~~~~ 331 (376)
T 2dou_A 253 ERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV-LSLLPPRATMYLWGRLPEGVDDLEFGLR 331 (376)
T ss_dssp HHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT-SEECCCCBSSEEEEECCTTCCHHHHHHH
T ss_pred HHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCC-EEEECCCCEEEEEEECCCCCCHHHHHHH
T ss_conf 111101223322320234443024554332222222232210234553374-2685798127998989999799999999
Q ss_pred HHHCCCEEEECCCCCC--CCEEEEEECC-HHHHHHHHHHHHHHHH
Q ss_conf 9876938960778888--8747887479-8999999999999984
Q T0636 293 LRERGIQVKDAGQFGL--HHHIRISIGR-EEDNDRLLAALAEYSD 334 (336)
Q Consensus 293 L~~~gi~vr~~~~fg~--~~~iRis~~~-~ee~~~l~~aL~~~~e 334 (336)
|.++||.++||+.|+. ++|+|||+++ ++++++.+++|+++.|
T Consensus 332 l~e~gV~v~pg~~F~~~~~~~~Ris~~~~~e~l~~ai~rL~~~le 376 (376)
T 2dou_A 332 LVERGVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREALD 376 (376)
T ss_dssp HHHTTEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC-
T ss_pred HHHCCEEEEECHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC
T ss_conf 997998998341208999997999973899999999999999869
No 24
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.19A {Helicobacter pylori 26695}
Probab=100.00 E-value=0 Score=372.71 Aligned_cols=328 Identities=20% Similarity=0.214 Sum_probs=256.8
Q ss_pred HHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHH------CCCHHHEEEECCH
Q ss_conf 15789750366553573576548887689999999998750058898-6189999999984------8885438860778
Q T0636 4 GEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFD-AEPRVMRKLAEHF------SCPEDNLMLVRGI 76 (336)
Q Consensus 4 ~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~-~~~~Lr~aia~~~------~v~~d~I~~t~Gs 76 (336)
+.+.-+...+++++|+|+.|+++||+|+.+++++++..+..++||++ |.++||++||+++ .+++|+|++|+|+
T Consensus 12 l~~l~~~~~~~~~~I~l~~g~pd~~~p~~i~~a~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~it~G~ 91 (376)
T 3ezs_A 12 LRALLKEITPKKRGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGS 91 (376)
T ss_dssp HHHHHTTCCCSSCCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSS
T ss_pred HHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCH
T ss_conf 99998644589884779699998977799999999876377779988577999999999999985899975768974787
Q ss_pred HHHHHHHHHHH----CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCC--CCCCHHHHHHHCCHHHHHHHCCCCCCCCC
Q ss_conf 89999999984----6992576388735699999981880364155435--67788999730002431330366332222
Q T0636 77 DECFDRISAEF----SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD--LLLDPNDLAQVSRDDCVVLANPSNPTGQA 150 (336)
Q Consensus 77 ~~~i~~~~~~~----~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~--~~~d~~~l~~~~~~~~i~l~nPnNPTG~~ 150 (336)
++++..++..+ +++.|++++|+|..|...+...|...+.++.++. +..+.. .....+++++++||||||||.+
T Consensus 92 ~~al~~i~~~~~~~~~~~~Vl~p~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~il~nP~NPtG~~ 170 (376)
T 3ezs_A 92 REVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTPSLN-EKELQEVDLVILNSPNNPTGRT 170 (376)
T ss_dssp HHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCCCCC-HHHHHHCSEEEECSSCTTTCCC
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCHHH-HHHCCCCCEEEECCCCCCCCCC
T ss_conf 999999999986247999899788746203667876276045125433454430378-8750687389989997987745
Q ss_pred CCHHHHHHH---HHHCCCC-CCCCCCCCCCCCCCC-------H---HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHH
Q ss_conf 237999999---9737872-025210025886620-------0---3324520012023465233434531311788999
Q T0636 151 LSAGELDQL---RQRAGKL-LIDETYVDYSSFRAR-------G---LAYGENELVFRSFSKSYGLAGLRLGALFGPSELI 216 (336)
Q Consensus 151 ~~~~~l~~l---~~~~~~~-IvDeaY~~f~~~~~~-------~---l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i 216 (336)
++.+++.+| +++++.+ |+||+|.+|...... . ...++++|+++||||.||+||+|+||++++++++
T Consensus 171 ~s~~~l~~i~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR~G~~~~~~~~i 250 (376)
T 3ezs_A 171 LSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLL 250 (376)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHH
T ss_pred CCHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCHHHH
T ss_conf 30778999986221567489942762442068988733331101364456878999525324668764310000899999
Q ss_pred HHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHHHHHHHH-
Q ss_conf 9997337877--8777789999999745999999999999999999999985897861698647886569889999999-
Q T0636 217 AAMKRKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENAAGERTLRFL- 293 (336)
Q Consensus 217 ~~l~~~~~~~--~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~~~~~~~~~L- 293 (336)
+.+.+....+ +++++.+..+..+.....+.+..++.+.++++.+.+.+... ..|++|+|+|++.++++++.+.|
T Consensus 251 ~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~g~~~~~~~~~~~~~~~~~Ll 327 (376)
T 3ezs_A 251 EKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFKNT---LIYPYSFYVYLPVQNGENFAKTLY 327 (376)
T ss_dssp HHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHSTTC---CCCSBSSEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 99999998637756479999999997395889999999999999999975325---789955899964799999999999
Q ss_pred HHCCCEEEECCCCCC----CCEEEEEEC-CHHHHHHHHHHHHHHHHC
Q ss_conf 876938960778888----874788747-989999999999999842
Q T0636 294 RERGIQVKDAGQFGL----HHHIRISIG-REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 294 ~~~gi~vr~~~~fg~----~~~iRis~~-~~ee~~~l~~aL~~~~e~ 335 (336)
.++||++.||..||. ++|+|||++ +++++++.++.|++|+|+
T Consensus 328 ~e~gV~v~PG~~Fg~~~~g~~~iRis~~~~~e~l~~al~rl~~~~e~ 374 (376)
T 3ezs_A 328 QNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp HHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC
T ss_pred HHCCEEEECCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 85999998104428998889969999718899999999999999996
No 25
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=0 Score=367.98 Aligned_cols=323 Identities=19% Similarity=0.296 Sum_probs=258.9
Q ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHHH----HHCCCCC-CHHHHHHHHHHHH----C--CCH-HHEEEECCHHHHH
Q ss_conf 6655357357654888768999999999875----0058898-6189999999984----8--885-4388607788999
Q T0636 13 AAAQAVCLAFNENPEAVEPRVQAAIAAAAAR----INRYPFD-AEPRVMRKLAEHF----S--CPE-DNLMLVRGIDECF 80 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~----~~~Ypd~-~~~~Lr~aia~~~----~--v~~-d~I~~t~Gs~~~i 80 (336)
...++|+|+.++..|+||+.+++++.+++.+ .++|++. |.++||++||+++ | ++| |+|++|+|++++|
T Consensus 35 ~~~~~I~L~~G~Pd~~~p~~v~~a~~~a~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~I~it~G~~~al 114 (429)
T 1yiz_A 35 AQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEAL 114 (429)
T ss_dssp HHHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCHHH
T ss_conf 68996876687998988999999999998389966768999978999999999988998499888146089867871542
Q ss_pred HHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCC----------CCCCCHHHHHHH--CCHHHHHHHCCCCC
Q ss_conf 9999984--699257638873569999998188036415543----------567788999730--00243133036633
Q T0636 81 DRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD----------DLLLDPNDLAQV--SRDDCVVLANPSNP 146 (336)
Q Consensus 81 ~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~----------~~~~d~~~l~~~--~~~~~i~l~nPnNP 146 (336)
.++++++ +||.|++++|+|+.|...+...|..++.++++. .|.++.+++... .+++++++||||||
T Consensus 115 ~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~NP 194 (429)
T 1yiz_A 115 YATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNP 194 (429)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTT
T ss_pred CCCHHHHCCCCCCEEECCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf 23013200233201101233420367898639779998720355666305666666588765554035542211650224
Q ss_pred CCCCCCHHHHHHH---HHHCCCCCC-CCCCCCCC--CCCCCHH----HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHH
Q ss_conf 2222237999999---973787202-52100258--8662003----324520012023465233434531311788999
Q T0636 147 TGQALSAGELDQL---RQRAGKLLI-DETYVDYS--SFRARGL----AYGENELVFRSFSKSYGLAGLRLGALFGPSELI 216 (336)
Q Consensus 147 TG~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~--~~~~~~l----~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i 216 (336)
||.+++.+++.+| +++++.+|+ ||+|.+|. +....++ ...+++++++||||.||+||+|+||++++++++
T Consensus 195 tG~~~s~e~~~~l~~~~~~~~i~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~~~~~~~i 274 (429)
T 1yiz_A 195 LGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALL 274 (429)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 54331388888887640201335124544444330134553001576555402112157753168877545322320244
Q ss_pred HHHHHCC--CCCCCCHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC-
Q ss_conf 9997337--8778777789999999745--------999999999999999999999985897861698-647886569-
Q T0636 217 AAMKRKQ--WFCNVGTLDLHALEAALDN--------DRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA- 284 (336)
Q Consensus 217 ~~l~~~~--~~~~~~~~~~~aa~~~l~~--------~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~- 284 (336)
+.+.+.. ..++++++.|.++...+.+ ..+++..++.+..+|+.+.+.|+++|+++.+++ |+|+|++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~p~gg~fl~~~~~~ 354 (429)
T 1yiz_A 275 KNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSS 354 (429)
T ss_dssp HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCS
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
T ss_conf 44431022232445545665410033223333333013567788999998888888899739813479930399886244
Q ss_pred --------------CHHHHHHH-HHHCCCEEEECCCCCC-------CCEEEEEEC-CHHHHHHHHHHHHHHHHC
Q ss_conf --------------88999999-9876938960778888-------874788747-989999999999999842
Q T0636 285 --------------AGERTLRF-LRERGIQVKDAGQFGL-------HHHIRISIG-REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 --------------~~~~~~~~-L~~~gi~vr~~~~fg~-------~~~iRis~~-~~ee~~~l~~aL~~~~e~ 335 (336)
++.++++. ++++||.+.||+.|+. ++|+|||++ .++++++.+++|++|+.-
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PGs~F~~~~~~~~g~~~iRi~~~~~~e~l~~a~~rl~~~~gs 428 (429)
T 1yiz_A 355 LDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp SCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 66411101203446789999999997899997735648887766789989999648999999999999998724
No 26
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphate, external aldimine, chloroplast, plastid; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=0 Score=365.90 Aligned_cols=326 Identities=21% Similarity=0.302 Sum_probs=244.9
Q ss_pred HHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH------HCCCC-CCHHHHHHHHHHHH----CCCHHHEEEECCHHH
Q ss_conf 50366553573576548887689999999998750------05889-86189999999984----888543886077889
Q T0636 10 EVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARI------NRYPF-DAEPRVMRKLAEHF----SCPEDNLMLVRGIDE 78 (336)
Q Consensus 10 ~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~------~~Ypd-~~~~~Lr~aia~~~----~v~~d~I~~t~Gs~~ 78 (336)
...+++++|+|+.+++++|+|+.+++++.+++.+. ++|++ .|.++||++||+++ ++++|+|++|+|+++
T Consensus 51 ~~~~~~~vI~l~~G~p~~p~P~~i~~al~~~~~~~~~~~g~~~Y~~~~G~~~LR~aia~~~~~~~~v~~e~I~it~Ga~~ 130 (432)
T 3ei9_A 51 LKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKC 130 (432)
T ss_dssp HHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHH
T ss_pred HHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHH
T ss_conf 86899987979388898999999999999998534654587799975148999999999996589989433775577304
Q ss_pred HHHHHHHHH-CCCCEEECCCCCHHHHHHHHHHCCCEEEEC-CCCC-----CCCCHHH-----HHHHCCHHHHHHHCCCCC
Q ss_conf 999999984-699257638873569999998188036415-5435-----6778899-----973000243133036633
Q T0636 79 CFDRISAEF-SSMRFVTAWPGFDGYRARIAVSGLRHFEIG-LTDD-----LLLDPND-----LAQVSRDDCVVLANPSNP 146 (336)
Q Consensus 79 ~i~~~~~~~-~~~~vii~~P~y~~y~~~~~~~g~~~~~vp-~~~~-----~~~d~~~-----l~~~~~~~~i~l~nPnNP 146 (336)
+|.++...+ +||.|++++|+|+.|...+...|......+ ...+ +..+.+. .....+++++++||||||
T Consensus 131 al~~l~~l~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~l~nP~NP 210 (432)
T 3ei9_A 131 DISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNP 210 (432)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGCCCCSEEEEESSCTT
T ss_pred HHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCH
T ss_conf 23100001468974056421424158999971785226302100223422457966720023454146558997898754
Q ss_pred CCCCCCHHHHHHH---HHHCCCCCC-CCCCCCCCCC--CC--CHH-HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHH
Q ss_conf 2222237999999---973787202-5210025886--62--003-3245200120234652334345313117889999
Q T0636 147 TGQALSAGELDQL---RQRAGKLLI-DETYVDYSSF--RA--RGL-AYGENELVFRSFSKSYGLAGLRLGALFGPSELIA 217 (336)
Q Consensus 147 TG~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~~~--~~--~~l-~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~ 217 (336)
||.+++.+++.+| +++++.+|+ ||+|.++... .. ..+ ...+++++++||||.||+||+|+||++++++++.
T Consensus 211 TG~~~s~~~l~~l~~~a~~~~~~Ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~~i~ 290 (432)
T 3ei9_A 211 TGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLY 290 (432)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBC
T ss_pred HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHH
T ss_conf 55454320023322333322125530323431001466556210000002332345654233655444135981899999
Q ss_pred H--------HHH-CCCCC-CCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC
Q ss_conf 9--------973-37877-877778999999974--5999999999999999999999985897861698-647886569
Q T0636 218 A--------MKR-KQWFC-NVGTLDLHALEAALD--NDRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA 284 (336)
Q Consensus 218 ~--------l~~-~~~~~-~~~~~~~~aa~~~l~--~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~ 284 (336)
. ... ....+ ..+.+++..+..+.. ..+++.+.++.+.++|+.+.+.|+++|+++.+++ |+|+|++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~gg~f~w~~~p 370 (432)
T 3ei9_A 291 SDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFP 370 (432)
T ss_dssp TTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEEECT
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECC
T ss_conf 76311334444202122356514554432200102445579999999999999999999987977736997149999899
Q ss_pred --CHHHHH-HHHHHCCCEEEECCCCCC--CCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf --889999-999876938960778888--8747887479-89999999999999842
Q T0636 285 --AGERTL-RFLRERGIQVKDAGQFGL--HHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 --~~~~~~-~~L~~~gi~vr~~~~fg~--~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
++.+.+ +.|.++||.|+||+.||. ++|+|||+++ +|+++..++.|+++.++
T Consensus 371 ~~~~~e~~~~ll~~~gV~v~PG~~F~~~~~~~iRis~~~~~e~l~eal~Rl~~~~k~ 427 (432)
T 3ei9_A 371 NQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYKH 427 (432)
T ss_dssp TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHCCEEEEECHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 999899999999859999993522089998969999708999999999999998243
No 27
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S lyase; YP_813084.1, structural genomics, joint center for structural genomics; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp}
Probab=100.00 E-value=0 Score=360.43 Aligned_cols=323 Identities=18% Similarity=0.186 Sum_probs=247.7
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHH----C--CCHHHEEEECCHHHHHHHHH
Q ss_conf 36655357357654888768999999999875-00588986189999999984----8--88543886077889999999
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFDAEPRVMRKLAEHF----S--CPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~~~~~Lr~aia~~~----~--v~~d~I~~t~Gs~~~i~~~~ 84 (336)
+..+++|.|...+-.||+||.+++|+++++++ ..+||+ +..+||++||+++ | +++|+|++|+|++++|..++
T Consensus 24 ~~~~~~i~~~v~d~dfp~p~~v~~al~~~~~~~~~gY~~-~~~elReaia~~~~~~~g~~~~~e~I~it~G~~~al~~~~ 102 (391)
T 3dzz_A 24 VLKEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYES-VPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMV 102 (391)
T ss_dssp TCCTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBC-CCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHH
T ss_pred CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 789884305777889999999999999998579979789-5989999999999998689999476998888999999999
Q ss_pred HHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC---CCCCCCHHHHHH---HCCHHHHHHHCCCCCCCCCCCHHHH
Q ss_conf 984--69925763887356999999818803641554---356778899973---0002431330366332222237999
Q T0636 85 AEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT---DDLLLDPNDLAQ---VSRDDCVVLANPSNPTGQALSAGEL 156 (336)
Q Consensus 85 ~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~---~~~~~d~~~l~~---~~~~~~i~l~nPnNPTG~~~~~~~l 156 (336)
+++ +||.|++++|+|+.|...++..|.+++.+++. ++|.+|.+++.+ ..+++++++||||||||.+++.+++
T Consensus 103 ~~l~~pgd~vlv~~P~y~~~~~~~~~~g~~~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~e~~ 182 (391)
T 3dzz_A 103 RQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEV 182 (391)
T ss_dssp HHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHH
T ss_pred HHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHH
T ss_conf 99579989899827871778999986177325432147788888999999997178996699978996987765418999
Q ss_pred HHH---HHHCCCCCC-CCCCCCCC--CCCCCH-----HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHH-HHHCCC
Q ss_conf 999---973787202-52100258--866200-----332452001202346523343453131178899999-973378
Q T0636 157 DQL---RQRAGKLLI-DETYVDYS--SFRARG-----LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAA-MKRKQW 224 (336)
Q Consensus 157 ~~l---~~~~~~~Iv-DeaY~~f~--~~~~~~-----l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~-l~~~~~ 224 (336)
.+| +++++.+|+ ||+|.+|. +..... ....+++|+++||||.|++||+|+||++++...+.. +.+...
T Consensus 183 ~~l~~~~~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~ 262 (391)
T 3dzz_A 183 KRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFF 262 (391)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHH
T ss_conf 99999988660799994364321025876670665431243204540467303110113168998086999999864222
Q ss_pred ---CCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHC-CCEEECCCC-CEEEEECC----CHHHHHHHH
Q ss_conf ---778777789999999745-9999999999999999999999-858-978616986-47886569----889999999
Q T0636 225 ---FCNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADAL-RGL-GYRVASSEA-NFVLVENA----AGERTLRFL 293 (336)
Q Consensus 225 ---~~~~~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l-~~l-g~~~~~s~~-~Fi~~~~~----~~~~~~~~L 293 (336)
..+.+..++.++..++++ .++..+.++.++++++.+.+.+ ..+ |+++.+++| .|+|++++ +++++.+.|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~L 342 (391)
T 3dzz_A 263 LAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCKYL 342 (391)
T ss_dssp HHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHH
T ss_conf 03687557899999999975025678999999999999999975333788468268972499997888898999999999
Q ss_pred H-HCCCEEEECCCCCC--CCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf 8-76938960778888--8747887479-89999999999999842
Q T0636 294 R-ERGIQVKDAGQFGL--HHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 294 ~-~~gi~vr~~~~fg~--~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
. ++||.|+||+.|+. ++|+|||+++ +++++..++.|+++.++
T Consensus 343 l~~~gV~v~pG~~F~~~~~~~iRis~~~~~e~l~eal~rl~~~l~~ 388 (391)
T 3dzz_A 343 REKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp HHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 9849999966422188999979999708999999999999999997
No 28
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; NP_940074.1, structural genomics, joint center for structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=0 Score=363.10 Aligned_cols=322 Identities=16% Similarity=0.198 Sum_probs=255.5
Q ss_pred HCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHH----C--CCHHHEEEECCHHHHHHHH
Q ss_conf 036655357357654888768999999999875-00588986189999999984----8--8854388607788999999
Q T0636 11 VRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFDAEPRVMRKLAEHF----S--CPEDNLMLVRGIDECFDRI 83 (336)
Q Consensus 11 ~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~~~~~Lr~aia~~~----~--v~~d~I~~t~Gs~~~i~~~ 83 (336)
.+.++++|+|..+|..|||||.+++|+.+++++ .++||++.+ .||++||+++ | +++|+|++|+|++++|.++
T Consensus 19 ~~~~~~ii~l~igd~df~~p~~v~~al~~~~~~~~~gY~~~~g-~Lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~ 97 (377)
T 3fdb_A 19 TRYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQPDGS-LLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIA 97 (377)
T ss_dssp HSSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCCSSC-CHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred HHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
T ss_conf 8679982751137989987899999999998679978999840-999999999998729999965577525403444244
Q ss_pred HHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 9984--699257638873569999998188036415543567788999730--002431330366332222237999999
Q T0636 84 SAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQL 159 (336)
Q Consensus 84 ~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l 159 (336)
++++ +||+|++++|+|+.|...++..|+.++.++. ++++|++++++. .+++++++||||||||.+++.+++.+|
T Consensus 98 ~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~--~~~~d~~~l~~~~~~~~k~i~l~~P~NPTG~v~s~~~~~~l 175 (377)
T 3fdb_A 98 IDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDA--TGGINLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNEL 175 (377)
T ss_dssp HHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEEC--TTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHH
T ss_pred HHHCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHH
T ss_conf 4302454332321010000123333210123211122--24555310001223343310122355744303125443233
Q ss_pred ---HHHCCCCC-CCCCCCCCC--CCCCCH----HHHCCCHHHHHHHHHHHCCCCCCCEEECC-CHHHHHHHHHCCC--CC
Q ss_conf ---97378720-252100258--866200----33245200120234652334345313117-8899999973378--77
Q T0636 160 ---RQRAGKLL-IDETYVDYS--SFRARG----LAYGENELVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRKQW--FC 226 (336)
Q Consensus 160 ---~~~~~~~I-vDeaY~~f~--~~~~~~----l~~~~n~iv~~S~SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~--~~ 226 (336)
+++++.+| +||+|.++. +....+ ....+++++++||||.|+++|+|+||++. ++.+++.+.+... ..
T Consensus 176 ~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~ 255 (377)
T 3fdb_A 176 CDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKD 255 (377)
T ss_dssp HHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHHC
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
T ss_conf 20223345542040344432344332211122222233332102455444455433222345301111101132211123
Q ss_pred CCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHC-CCEEECCCCC-EEEEECCC----HHHHHHHHHHCCC
Q ss_conf 8777789999999745-9999999999999999999999-858-9786169864-78865698----8999999987693
Q T0636 227 NVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADAL-RGL-GYRVASSEAN-FVLVENAA----GERTLRFLRERGI 298 (336)
Q Consensus 227 ~~~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l-~~l-g~~~~~s~~~-Fi~~~~~~----~~~~~~~L~~~gi 298 (336)
+++.++|.++..+++. ..+..+..+.+.++|+.+.+.+ +.. |+++.+++|+ |+|+++++ .+.....|.++||
T Consensus 256 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~gV 335 (377)
T 3fdb_A 256 GASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIEGSPSEFFIEKAKV 335 (377)
T ss_dssp CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCCSCHHHHHHHHHCE
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCE
T ss_conf 21102267899986402122233322221023332012322344425417981589999788888868999999985999
Q ss_pred EEEECCCCCC--CCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf 8960778888--8747887479-89999999999999842
Q T0636 299 QVKDAGQFGL--HHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 299 ~vr~~~~fg~--~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
.|.||+.||. ++|+|+|+++ +|+++..++.|++++++
T Consensus 336 ~v~pG~~Fg~~~~~~iRls~~~~~e~l~~al~rL~~~l~~ 375 (377)
T 3fdb_A 336 AMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp ECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred EEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 9976644388998869999718999999999999999986
No 29
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=0 Score=368.61 Aligned_cols=324 Identities=19% Similarity=0.266 Sum_probs=255.6
Q ss_pred HCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH--HHHCCCCC-CHHHHHHHHHHHH----CC--C-HHHEEEECCHHHHH
Q ss_conf 03665535735765488876899999999987--50058898-6189999999984----88--8-54388607788999
Q T0636 11 VRAAAQAVCLAFNENPEAVEPRVQAAIAAAAA--RINRYPFD-AEPRVMRKLAEHF----SC--P-EDNLMLVRGIDECF 80 (336)
Q Consensus 11 ~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~--~~~~Ypd~-~~~~Lr~aia~~~----~v--~-~d~I~~t~Gs~~~i 80 (336)
..++..+|+|+.++..+|+|+.+++++.++++ +.++||+. |.++||++||+++ |+ . +++|++|+|++++|
T Consensus 43 ~~~~~~vI~l~~G~p~~p~p~~i~eal~~a~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~~I~it~Gs~~al 122 (404)
T 2o1b_A 43 EHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGL 122 (404)
T ss_dssp CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHH
T ss_pred HCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHH
T ss_conf 62999779831888999878999999999974876578898747899999999999986499999655799926989999
Q ss_pred HHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCC-CCCCHHHHH--HHCCHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 9999984--6992576388735699999981880364155435-677889997--3000243133036633222223799
Q T0636 81 DRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD-LLLDPNDLA--QVSRDDCVVLANPSNPTGQALSAGE 155 (336)
Q Consensus 81 ~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~-~~~d~~~l~--~~~~~~~i~l~nPnNPTG~~~~~~~ 155 (336)
.++++++ +||.|++++|+|+.|...+...|.+++.++.+++ +..|.++++ ...+++++++||||||||.+++.++
T Consensus 123 ~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~ 202 (404)
T 2o1b_A 123 VAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEV 202 (404)
T ss_dssp HHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHH
T ss_pred HHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEECHH
T ss_conf 99999972899989985687632578999759789852025876667889985320247549997899799871221213
Q ss_pred HHHH---HHHCCCCCC-CCCCCCCCCC--CCCHH---HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCC
Q ss_conf 9999---973787202-5210025886--62003---3245200120234652334345313117889999997337877
Q T0636 156 LDQL---RQRAGKLLI-DETYVDYSSF--RARGL---AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFC 226 (336)
Q Consensus 156 l~~l---~~~~~~~Iv-DeaY~~f~~~--~~~~l---~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~ 226 (336)
+.++ +++++.+|+ ||+|.++... ..... ...+++|+++||||+||+||+|+||+++++++++.+.+.+..+
T Consensus 203 ~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~~I~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~ 282 (404)
T 2o1b_A 203 FDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHT 282 (404)
T ss_dssp HHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCC
T ss_conf 34333211456714776531001034788877533356768779983685566687675222220215667888764013
Q ss_pred CCCHH--HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC---CHHHHHHHH-HHCCC
Q ss_conf 87777--8999999974-5999999999999999999999985897861698-647886569---889999999-87693
Q T0636 227 NVGTL--DLHALEAALD-NDRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA---AGERTLRFL-RERGI 298 (336)
Q Consensus 227 ~~~~~--~~~aa~~~l~-~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~---~~~~~~~~L-~~~gi 298 (336)
+.+.. .+.++..++. ..+++++..+.+.++|+.+.+.|++.|+.+.+++ |+|+|++++ ++.++++.| .++||
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~p~gg~f~~~~~~~~~d~~~~~~~ll~e~gV 362 (404)
T 2o1b_A 283 NAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSI 362 (404)
T ss_dssp CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCE
T ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCE
T ss_conf 45775699999998640203567899998998999999999748995675794269999899998999999999973999
Q ss_pred EEEECCCCCC--CCEEEEEECC-HHHHHHHHHHHHHHHH
Q ss_conf 8960778888--8747887479-8999999999999984
Q T0636 299 QVKDAGQFGL--HHHIRISIGR-EEDNDRLLAALAEYSD 334 (336)
Q Consensus 299 ~vr~~~~fg~--~~~iRis~~~-~ee~~~l~~aL~~~~e 334 (336)
.|+||+.|+. ++|+|||++. .+++++.++.|+|+.+
T Consensus 363 ~v~PG~~F~~~g~~~iRis~~~~~e~l~~a~~RL~~~~~ 401 (404)
T 2o1b_A 363 LVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAY 401 (404)
T ss_dssp ECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGGG
T ss_pred EEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 999265548899987999971999999999999999999
No 30
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransferase); PLP-binding enzyme, lysine biosynthesis, structural genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis H37RV}
Probab=100.00 E-value=0 Score=363.19 Aligned_cols=324 Identities=23% Similarity=0.332 Sum_probs=260.6
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCC-CHHHHHHHHHHH----HCC--CHH-HEEEECCHHHHHHH
Q ss_conf 36655357357654888768999999999875-0058898-618999999998----488--854-38860778899999
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFD-AEPRVMRKLAEH----FSC--PED-NLMLVRGIDECFDR 82 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~-~~~~Lr~aia~~----~~v--~~d-~I~~t~Gs~~~i~~ 82 (336)
....++|+|+.+++.+++|+.+++++.+++++ .++||+. |.++||++||++ +|+ +++ +|++|+|+++++.+
T Consensus 22 a~~~~~I~l~~G~Pd~~~p~~i~~al~~a~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~~I~vt~G~~~~l~~ 101 (411)
T 2o0r_A 22 ATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAA 101 (411)
T ss_dssp HHTTTCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHH
T ss_pred HCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHH
T ss_conf 06799278039899998889999999999856998989997889999999999999858999977779983780999999
Q ss_pred HHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCC---CCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 99984--699257638873569999998188036415543---567788999730--00243133036633222223799
Q T0636 83 ISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD---DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGE 155 (336)
Q Consensus 83 ~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~---~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~ 155 (336)
++.++ +||.|++++|+|+.|...+...|.+++.+++.. .+.+|++++++. .+++++++||||||||.+++.++
T Consensus 102 ~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~nP~NPtG~~~s~~~ 181 (411)
T 2o0r_A 102 AVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATE 181 (411)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHH
T ss_conf 99974489997997888773068999984995445655631246678899999727899749998999598774555554
Q ss_pred HHHH---HHHCCCCCC-CCCCCCCCC--CCCC----HHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCC-
Q ss_conf 9999---973787202-521002588--6620----0332452001202346523343453131178899999973378-
Q T0636 156 LDQL---RQRAGKLLI-DETYVDYSS--FRAR----GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW- 224 (336)
Q Consensus 156 l~~l---~~~~~~~Iv-DeaY~~f~~--~~~~----~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~- 224 (336)
+.+| +++++.+|+ ||+|.++.. .... .....+++++++|+||.+++||+|+||+++++++++.+++...
T Consensus 182 ~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlRiG~~~~~~~~~~~~~~~~~~ 261 (411)
T 2o0r_A 182 LAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQY 261 (411)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHH
T ss_pred CCCHHHHCCCCEEEEEEECCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHCCCHHHHHHHHHHHH
T ss_conf 02114312554258984412101115787777555521444454445576202468744536443023479999999864
Q ss_pred -CCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC-EEEEEC-----CCHHHHHHHH-HH
Q ss_conf -778777789999999745-99999999999999999999998589786169864-788656-----9889999999-87
Q T0636 225 -FCNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLGYRVASSEAN-FVLVEN-----AAGERTLRFL-RE 295 (336)
Q Consensus 225 -~~~~~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~-Fi~~~~-----~~~~~~~~~L-~~ 295 (336)
.++.+.+.|.++..++.+ .+++.+.++.+..+|+.+.+.|+++|+.+.+++|+ |+|++. .++.++++.| .+
T Consensus 262 ~~~~~~~~~q~a~~~~l~~~~~~l~~~r~~~~~~r~~l~~~L~~~g~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~Ll~e 341 (411)
T 2o0r_A 262 LSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEK 341 (411)
T ss_dssp HTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 36555469999999998486177999999999999999998886297871798069998845778999999999999986
Q ss_pred CCCEEEECCCCCC-------------CCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf 6938960778888-------------8747887479-89999999999999842
Q T0636 296 RGIQVKDAGQFGL-------------HHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 296 ~gi~vr~~~~fg~-------------~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
+||.|.||+.|+. .+|+|||++. ++++++.++.|+++.|+
T Consensus 342 ~gV~v~PG~~F~~~~~~~~~~~~~~~~~~iRis~~~~~~~l~ea~~rl~~~ler 395 (411)
T 2o0r_A 342 VGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp HSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC-
T ss_pred CCEEEECCHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 899997245758887775555545678879999649999999999999999851
No 31
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=0 Score=362.89 Aligned_cols=324 Identities=17% Similarity=0.222 Sum_probs=248.3
Q ss_pred CCCCCCEECCCCCCC----CCCCHHHHHHHHHHHH--HHHCCCC-CCHHHHHHHHHHHH------------CCCHHHEEE
Q ss_conf 366553573576548----8876899999999987--5005889-86189999999984------------888543886
Q T0636 12 RAAAQAVCLAFNENP----EAVEPRVQAAIAAAAA--RINRYPF-DAEPRVMRKLAEHF------------SCPEDNLML 72 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp----~~p~~~v~~al~~~~~--~~~~Ypd-~~~~~Lr~aia~~~------------~v~~d~I~~ 72 (336)
..++++|+|+.+++. +++++.+++++.++++ +.++|++ .|.++||++||+++ ++++++|++
T Consensus 30 ~~~~~vi~l~~G~p~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~~~~~~~I~i 109 (416)
T 1bw0_A 30 PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVL 109 (416)
T ss_dssp CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEE
T ss_pred CCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
T ss_conf 89998268858879999985320999999999862887778899857899999999999874475435688888041898
Q ss_pred ECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC--CCCCCCHHHHHHH--CCHHHHHHHCCCCC
Q ss_conf 077889999999984--69925763887356999999818803641554--3567788999730--00243133036633
Q T0636 73 VRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNP 146 (336)
Q Consensus 73 t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~--~~~~~d~~~l~~~--~~~~~i~l~nPnNP 146 (336)
|+|++++|.++++++ +||.|++++|+|+.|...++..|.+++.+|++ .+|.++++++.+. .+++++++||||||
T Consensus 110 t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~p~NP 189 (416)
T 1bw0_A 110 CSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNP 189 (416)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTT
T ss_pred CCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 76699999999999728999899804887403666642695667632554445422599999850455667886899698
Q ss_pred CCCCCCHHHHHHH---HHHCCC-CCCCCCCCCCC--CCCCCH-------HHHCCCHHHHHHHHHHHCCCCCCCEEECCCH
Q ss_conf 2222237999999---973787-20252100258--866200-------3324520012023465233434531311788
Q T0636 147 TGQALSAGELDQL---RQRAGK-LLIDETYVDYS--SFRARG-------LAYGENELVFRSFSKSYGLAGLRLGALFGPS 213 (336)
Q Consensus 147 TG~~~~~~~l~~l---~~~~~~-~IvDeaY~~f~--~~~~~~-------l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~ 213 (336)
||.+++.+++.++ +++++. +|+||+|.+|. +..... .....++++++||||.|++||+|+||+++++
T Consensus 190 tG~~~~~e~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~GlRvG~~v~~~ 269 (416)
T 1bw0_A 190 CGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVD 269 (416)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECC
T ss_conf 87464099999987567641964774010133302787887144320112344311134577666777865879999532
Q ss_pred ------HHHHHHHHCCC-CCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECC-CCCEEEEE
Q ss_conf ------99999973378-77877778999999974--59999999999999999999999858-9786169-86478865
Q T0636 214 ------ELIAAMKRKQW-FCNVGTLDLHALEAALD--NDRAREAHIAKTLAQRRRVADALRGL-GYRVASS-EANFVLVE 282 (336)
Q Consensus 214 ------~~i~~l~~~~~-~~~~~~~~~~aa~~~l~--~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~s-~~~Fi~~~ 282 (336)
++++.+.+... ..+.+...|..+..++. ..+++.+.++.+.++|+.+.+.|.+. |+.+..+ +|+|+|++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~gg~yl~~~ 349 (416)
T 1bw0_A 270 PHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSR 349 (416)
T ss_dssp TTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEE
T ss_conf 56667899998876422234772788888999875022221103568999999999999986589575178951599895
Q ss_pred CC--------CHHHHHHH-HHHCCCEEEECCCCCCCCEEEEEECCH-HHHHHHHHHHHHHHHC
Q ss_conf 69--------88999999-987693896077888887478874798-9999999999999842
Q T0636 283 NA--------AGERTLRF-LRERGIQVKDAGQFGLHHHIRISIGRE-EDNDRLLAALAEYSDH 335 (336)
Q Consensus 283 ~~--------~~~~~~~~-L~~~gi~vr~~~~fg~~~~iRis~~~~-ee~~~l~~aL~~~~e~ 335 (336)
++ ++.++++. |.++||.+.||+.|+.++|+|||++++ ++++..++.|++|+|+
T Consensus 350 ~~~~~~~~~~~~~e~~~~ll~~~gV~v~PG~~F~~~g~~Ris~~~~~e~l~eai~Rl~~~~~r 412 (416)
T 1bw0_A 350 IDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp ECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 782444788899999999999699999966214899949999648999999999999999996
No 32
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence of substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=0 Score=359.90 Aligned_cols=330 Identities=18% Similarity=0.291 Sum_probs=260.3
Q ss_pred HHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCC-CCHHHHHHHHHHHHC-------CCHHHEEEECCH
Q ss_conf 78975036655357357654888768999999999875-005889-861899999999848-------885438860778
Q T0636 6 AMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPF-DAEPRVMRKLAEHFS-------CPEDNLMLVRGI 76 (336)
Q Consensus 6 ~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd-~~~~~Lr~aia~~~~-------v~~d~I~~t~Gs 76 (336)
.+.+...+.+++|+|+.|++++|||+.+++++.+++++ .++||+ .|.++||++||+++. .++++|++|+|+
T Consensus 17 ~~~~~~~~~~~vI~l~~g~p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~~~~g~ 96 (389)
T 1gd9_A 17 KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGA 96 (389)
T ss_dssp HHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESST
T ss_pred HHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCH
T ss_conf 99999867999389999889998789999999999846887999986799999999999998729988983269984858
Q ss_pred HHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC--CCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCC
Q ss_conf 89999999984--69925763887356999999818803641554--3567788999730--002431330366332222
Q T0636 77 DECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQA 150 (336)
Q Consensus 77 ~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~--~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~ 150 (336)
++++..++.++ +||.|++++|+|+.|...++..|..++.+++. ++|.+|++.++.. .+++++++||||||||.+
T Consensus 97 ~~~~~~~~~~~~~~gd~vl~~~P~y~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~~p~NPtG~~ 176 (389)
T 1gd9_A 97 NQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAV 176 (389)
T ss_dssp THHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCC
T ss_conf 99999999984149998980588604789999984998999634500154457999962468784899978999987826
Q ss_pred CCHHHHHHH---HHHCCCCCCCCCC-CCCCC--CCCCHH----HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHH
Q ss_conf 237999999---9737872025210-02588--662003----3245200120234652334345313117889999997
Q T0636 151 LSAGELDQL---RQRAGKLLIDETY-VDYSS--FRARGL----AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMK 220 (336)
Q Consensus 151 ~~~~~l~~l---~~~~~~~IvDeaY-~~f~~--~~~~~l----~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~ 220 (336)
++.+++.+| +++++.+|+|++| .++.. .....+ ...+|+|+++||||.||+||+|+||++++++.++.+.
T Consensus 177 ~s~~~~~~i~~~~~~~~i~vidD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~i~~~~~~~~~~~ 256 (389)
T 1gd9_A 177 LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMV 256 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHH
T ss_conf 78999999998887769899504544322025667765676448888879997775024442422105566666666666
Q ss_pred HCCCCC--CCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC----CHHHHH
Q ss_conf 337877--87777899999997459---99999999999999999999985897861698-647886569----889999
Q T0636 221 RKQWFC--NVGTLDLHALEAALDND---RAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA----AGERTL 290 (336)
Q Consensus 221 ~~~~~~--~~~~~~~~aa~~~l~~~---~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~----~~~~~~ 290 (336)
.....+ +.+.+.+.++...+.+. .++.+..+.+.++|+.+.+.|...++.+.+++ |+|+|++++ +++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~ 336 (389)
T 1gd9_A 257 KFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFS 336 (389)
T ss_dssp HHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHH
T ss_conf 65530232101589999999986774248999999999999999999974113565389960699998888899999999
Q ss_pred HHH-HHCCCEEEECCCCCC--CCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf 999-876938960778888--8747887479-89999999999999842
Q T0636 291 RFL-RERGIQVKDAGQFGL--HHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 291 ~~L-~~~gi~vr~~~~fg~--~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
+.| .++||+|+||+.||. ++|+|||+++ ++++++.++.|++++++
T Consensus 337 ~~ll~e~gV~v~pG~~Fg~~~~~~iRis~~~~~e~i~~a~~rl~~~l~e 385 (389)
T 1gd9_A 337 ELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp HHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 9999859999983333088999979999728899999999999999997
No 33
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=0 Score=357.84 Aligned_cols=320 Identities=23% Similarity=0.289 Sum_probs=259.3
Q ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCC
Q ss_conf 553573576548887689999999998750058898-6189999999984888543886077889999999984--6992
Q T0636 15 AQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFD-AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMR 91 (336)
Q Consensus 15 ~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~-~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~ 91 (336)
.+.|+|+.|.+.+||||.+++++++++++.++||++ |..+||++||+++++++|+|++|+|++++|..++.++ +||.
T Consensus 25 ~~~i~l~~g~p~~~~p~~v~~al~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~I~it~G~~~ai~~~~~~l~~~gd~ 104 (381)
T 1v2d_A 25 LGAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDE 104 (381)
T ss_dssp HTCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCE
T ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 99778338899998899999999998524779899857699999999874999465431451478889888742244564
Q ss_pred EEECCCCCHHHHHHHHHHCCCEEEECCC---CCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHH---HHHHC
Q ss_conf 5763887356999999818803641554---3567788999730--00243133036633222223799999---99737
Q T0636 92 FVTAWPGFDGYRARIAVSGLRHFEIGLT---DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQ---LRQRA 163 (336)
Q Consensus 92 vii~~P~y~~y~~~~~~~g~~~~~vp~~---~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~---l~~~~ 163 (336)
|++++|+|..|.......|.+++.++++ +.+..|++..+.. .+++++++||||||||.+++.+++.+ +++++
T Consensus 105 v~~~~P~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~a~~~ 184 (381)
T 1v2d_A 105 VVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAH 184 (381)
T ss_dssp EEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 21358873010135775187556641264213344678899874055676154369887654449999999999999983
Q ss_pred CCCCC-CCCCCCCCCCCC---CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCC--CCCCCHHHHHHHH
Q ss_conf 87202-521002588662---00332452001202346523343453131178899999973378--7787777899999
Q T0636 164 GKLLI-DETYVDYSSFRA---RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW--FCNVGTLDLHALE 237 (336)
Q Consensus 164 ~~~Iv-DeaY~~f~~~~~---~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~--~~~~~~~~~~aa~ 237 (336)
+.+|+ ||+|..+..... ......+++++++|+||.+++||+|+||+++++++++.+...+. ..+.++++|.++.
T Consensus 185 ~~~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~ 264 (381)
T 1v2d_A 185 DLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVA 264 (381)
T ss_dssp TCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHH
T ss_pred CCEEEEEHHHHHHCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98799720332220344442011023344425733565566786642222243234442323322233333333322222
Q ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECCCHHHHHHHHHHCCCEEEECCCCCC----C
Q ss_conf 9974599---9999999999999999999985897861698-647886569889999999876938960778888----8
Q T0636 238 AALDNDR---AREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENAAGERTLRFLRERGIQVKDAGQFGL----H 309 (336)
Q Consensus 238 ~~l~~~~---~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~----~ 309 (336)
.++...+ ++++..+.+.++++.+.+.++..|+++.+++ |+|+|++++. .+..++|.++||+|+||..|+. +
T Consensus 265 ~~l~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~p~g~~f~~~~l~~-~~~~~ll~~~gV~v~pG~~F~~~~~~~ 343 (381)
T 1v2d_A 265 EALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPG-WDAFRLVEEARVALIPASAFYLEDPPK 343 (381)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTT-CCHHHHHHHTCEECEEGGGGCSSSCCT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC-HHHHHHHHHCCEEEEECHHCCCCCCCC
T ss_conf 2233322210245657999997778999861102543079832699996893-389999996999999623307899989
Q ss_pred CEEEEEEC-CHHHHHHHHHHHHHHHHC
Q ss_conf 74788747-989999999999999842
Q T0636 310 HHIRISIG-REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 310 ~~iRis~~-~~ee~~~l~~aL~~~~e~ 335 (336)
+|+|||++ ++|+++..++.|+++.++
T Consensus 344 ~~iRis~~~~~e~l~~al~rl~~~l~~ 370 (381)
T 1v2d_A 344 DLFRFAFCKTEEELHLALERLGRVVNS 370 (381)
T ss_dssp TEEEEECCSCHHHHHHHHHHHHHHC--
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 989999659999999999999999997
No 34
>1m7y_A ACC synthase, 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, pyridoxal phosphate, lyase; HET: PPG; 1.60A {Malus x domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=0 Score=358.30 Aligned_cols=321 Identities=18% Similarity=0.267 Sum_probs=243.1
Q ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHH-------------HHHHHCCCCC-CHHHHHHHHHHHHC--------CCHHHEE
Q ss_conf 655357357654888768999999999-------------8750058898-61899999999848--------8854388
Q T0636 14 AAQAVCLAFNENPEAVEPRVQAAIAAA-------------AARINRYPFD-AEPRVMRKLAEHFS--------CPEDNLM 71 (336)
Q Consensus 14 ~~~~i~L~~Nenp~~p~~~v~~al~~~-------------~~~~~~Ypd~-~~~~Lr~aia~~~~--------v~~d~I~ 71 (336)
+.++|.|+.+||++- .+.+.+-+.+. ..++..|||. |.++||++||++++ ++||+|+
T Consensus 37 p~G~I~l~~aen~l~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~~~~~~g~~~~~~pe~I~ 115 (435)
T 1m7y_A 37 TNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLV 115 (435)
T ss_dssp TTSBEECSSCCCCSC-HHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEE
T ss_pred CCCEEEECCCCCCCC-HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEE
T ss_conf 986799436767423-6778998861997666665455530886179498162999999999999985899998842199
Q ss_pred EECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHH-HCCCEEEECCC--CCCCCCHHHHHHH--------CCHHHH
Q ss_conf 6077889999999984--699257638873569999998-18803641554--3567788999730--------002431
Q T0636 72 LVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAV-SGLRHFEIGLT--DDLLLDPNDLAQV--------SRDDCV 138 (336)
Q Consensus 72 ~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~-~g~~~~~vp~~--~~~~~d~~~l~~~--------~~~~~i 138 (336)
+|+|++++|.+++.++ +||.|++++|+|+.|...+.. .|+++++++++ ++|.+|++++++. .+++++
T Consensus 116 it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~i 195 (435)
T 1m7y_A 116 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 195 (435)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_conf 84899999999999973898989990898610789999958966998515614214689999999988887615875899
Q ss_pred HHHCCCCCCCCCCCHHHHHHH---HHHCCC-CCCCCCCCCCC--CCCCCHH-------------HHCCCHHHHHHHHHHH
Q ss_conf 330366332222237999999---973787-20252100258--8662003-------------3245200120234652
Q T0636 139 VLANPSNPTGQALSAGELDQL---RQRAGK-LLIDETYVDYS--SFRARGL-------------AYGENELVFRSFSKSY 199 (336)
Q Consensus 139 ~l~nPnNPTG~~~~~~~l~~l---~~~~~~-~IvDeaY~~f~--~~~~~~l-------------~~~~n~iv~~S~SK~~ 199 (336)
++||||||||.++++++++++ +++++. +|+||+|.++. +....++ ...+++++++||||.|
T Consensus 196 ~l~nP~NPtG~~~s~~~l~~i~~~a~~~~i~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~l~s~SK~~ 275 (435)
T 1m7y_A 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL 275 (435)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSS
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCHHH
T ss_conf 97899998441200999999975221178799997223312346888778899742226432345661499994583222
Q ss_pred CCCCCCCEEECCCHHHHHH-HHHCCCCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCEEECC
Q ss_conf 3343453131178899999-97337877877778999999974599----999999999999999999998589786169
Q T0636 200 GLAGLRLGALFGPSELIAA-MKRKQWFCNVGTLDLHALEAALDNDR----AREAHIAKTLAQRRRVADALRGLGYRVASS 274 (336)
Q Consensus 200 gl~GlRiG~~i~~~~~i~~-l~~~~~~~~~~~~~~~aa~~~l~~~~----~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s 274 (336)
|++|+|+||++++++++.. +.+......++...+.++.+.+.+.+ ++.+.++.+.++|+.+.+.|++.|+++.++
T Consensus 276 ~~~G~R~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~r~~~l~~~L~~~gi~~~~p 355 (435)
T 1m7y_A 276 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNG 355 (435)
T ss_dssp CCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCC
T ss_pred HCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
T ss_conf 04575799985788999999999744255665579999999973312144456778999999999999986279777369
Q ss_pred C-CCEEEEECCC---------HHHHHHHH-HHCCCEEEECCCCCC--CCEEEEEECC--HHHHHHHHHHHHHHHHC
Q ss_conf 8-6478865698---------89999999-876938960778888--8747887479--89999999999999842
Q T0636 275 E-ANFVLVENAA---------GERTLRFL-RERGIQVKDAGQFGL--HHHIRISIGR--EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 275 ~-~~Fi~~~~~~---------~~~~~~~L-~~~gi~vr~~~~fg~--~~~iRis~~~--~ee~~~l~~aL~~~~e~ 335 (336)
+ |.|+|++++. +.++++.| .++||.++||+.|+. ++|+|||+++ +++++..++.|++++++
T Consensus 356 ~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~g~iRi~~a~~~~~~l~~al~Rl~~~l~e 431 (435)
T 1m7y_A 356 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 9505998988454466764379999999999789999805002899989799995859999999999999999997
No 35
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis W83}
Probab=100.00 E-value=0 Score=357.51 Aligned_cols=324 Identities=14% Similarity=0.108 Sum_probs=251.5
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH--HHCCCCC-CHHHHHHHHHHHH----C--CCHHHEEEECCHHHHHHH
Q ss_conf 36655357357654888768999999999875--0058898-6189999999984----8--885438860778899999
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPFD-AEPRVMRKLAEHF----S--CPEDNLMLVRGIDECFDR 82 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~--~~~Ypd~-~~~~Lr~aia~~~----~--v~~d~I~~t~Gs~~~i~~ 82 (336)
..+.++|+|+.+++.+|+|+.+++++.+++.+ .++||+. |.++||++||+++ | +++++|++|+|+++++..
T Consensus 41 ~~g~~vi~l~~G~pd~~~P~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~vt~G~~~~l~~ 120 (437)
T 3g0t_A 41 ATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFV 120 (437)
T ss_dssp HHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred HCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCCHHHHHH
T ss_conf 37996277899798998769999999999749987888997473999999999998986889867859984792899999
Q ss_pred HHHHH------CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCC--CCCCHHHHHH--HCCHHHHHHHCCCCCCCCCCC
Q ss_conf 99984------6992576388735699999981880364155435--6778899973--000243133036633222223
Q T0636 83 ISAEF------SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD--LLLDPNDLAQ--VSRDDCVVLANPSNPTGQALS 152 (336)
Q Consensus 83 ~~~~~------~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~--~~~d~~~l~~--~~~~~~i~l~nPnNPTG~~~~ 152 (336)
++.++ +||.|++++|+|+.|...++..|.+++.+|+.++ |.++.+..+. ..+++++++||||||||.+++
T Consensus 121 a~~~~~~~~~~~gd~vli~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~P~NPTG~~~s 200 (437)
T 3g0t_A 121 SFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMT 200 (437)
T ss_dssp HHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
T ss_conf 99999861789999899916974168999998177555677631001131588999851589559998699698775555
Q ss_pred HHHHHHH---HHHCCCCCC-CCCCCCC--CCCC--------CCH-HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHH
Q ss_conf 7999999---973787202-5210025--8866--------200-33245200120234652334345313117889999
Q T0636 153 AGELDQL---RQRAGKLLI-DETYVDY--SSFR--------ARG-LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIA 217 (336)
Q Consensus 153 ~~~l~~l---~~~~~~~Iv-DeaY~~f--~~~~--------~~~-l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~ 217 (336)
.+++.+| +++++.+|| ||+|.++ .... ... ....+|+|+++||||+||+||+|+||+++++++++
T Consensus 201 ~~~~~~i~~~a~~~~~~ii~De~Y~~l~f~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~i~~~~~~i~ 280 (437)
T 3g0t_A 201 DEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYE 280 (437)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCHHCCCCCCCEEEEEECHHHHH
T ss_conf 44147777653023464445433100002676677643211133405577699998581422893616699998899999
Q ss_pred HHHH--------CC------------CCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCCEEE-
Q ss_conf 9973--------37------------87787777899999997459----99999999999999999999985897861-
Q T0636 218 AMKR--------KQ------------WFCNVGTLDLHALEAALDND----RAREAHIAKTLAQRRRVADALRGLGYRVA- 272 (336)
Q Consensus 218 ~l~~--------~~------------~~~~~~~~~~~aa~~~l~~~----~~~~~~~~~~~~~r~~l~~~l~~lg~~~~- 272 (336)
++.. .+ .....+.++|.++.++|+.. .++++.+..+.++|+.+.+.|+++|+...
T Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~y~~rr~~l~~~L~~~g~~~~~ 360 (437)
T 3g0t_A 281 REYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVY 360 (437)
T ss_dssp CBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTTEEESS
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999987765540124234554312677599999999986440239999999999999999999999975985556
Q ss_pred -----CCCCCEEEEECC----CHHHHHHHHHHCCCEEEECCCCCC--CCEEEEEEC--CHHHHHHHHHHHHHHHHC
Q ss_conf -----698647886569----889999999876938960778888--874788747--989999999999999842
Q T0636 273 -----SSEANFVLVENA----AGERTLRFLRERGIQVKDAGQFGL--HHHIRISIG--REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 273 -----~s~~~Fi~~~~~----~~~~~~~~L~~~gi~vr~~~~fg~--~~~iRis~~--~~ee~~~l~~aL~~~~e~ 335 (336)
++.|+|+|++.+ +++++...|.++|+.+.|++.||. .+++|++++ ..++++.+.++|+.+..+
T Consensus 361 ~~~~~~~~g~~~~~~l~~~~~d~~e~~~~ll~~g~~~vp~~~~g~~~~~~lRi~~s~~~e~~i~~l~~rL~~L~~e 436 (437)
T 3g0t_A 361 DKDGNEPLADGFYFTVGYKGMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CEETTEECCSSSEEEEEETTCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 7777888558999987899989999999999709899817877888999799996789988999999999888738
No 36
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, structural genomics, center for structural genomics of infectious diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str}
Probab=100.00 E-value=0 Score=349.60 Aligned_cols=322 Identities=16% Similarity=0.226 Sum_probs=247.1
Q ss_pred HCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHH----C--CCHHHEEEECCHHHHHHHH
Q ss_conf 036655357357654888768999999999875-00588986189999999984----8--8854388607788999999
Q T0636 11 VRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFDAEPRVMRKLAEHF----S--CPEDNLMLVRGIDECFDRI 83 (336)
Q Consensus 11 ~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~~~~~Lr~aia~~~----~--v~~d~I~~t~Gs~~~i~~~ 83 (336)
..+++.+|.|...+..|+||+.+++|+.+++++ ..+|+. +.++||++||+++ | +++|+|++|+|++++|.++
T Consensus 20 ~~~~~dvi~l~v~d~Df~~p~~i~~al~~~~~~~~~gY~~-g~~~LR~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~ 98 (383)
T 3kax_A 20 TYKNEELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTL-PPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTS 98 (383)
T ss_dssp CCSSSCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCC-CCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred HCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
T ss_conf 0589980658887989998899999999999688968989-968999999999999709999977899936863267899
Q ss_pred HHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCC---CCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHH
Q ss_conf 9984--699257638873569999998188036415543---567788999730--002431330366332222237999
Q T0636 84 SAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD---DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGEL 156 (336)
Q Consensus 84 ~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~---~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l 156 (336)
++++ +||.|++++|+|+.|...+...|..++.+|.++ .|.+|++.+++. .+++++++||||||||.+++.+++
T Consensus 99 ~~~l~~pGd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~P~NPTG~v~s~e~~ 178 (383)
T 3kax_A 99 IQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEEL 178 (383)
T ss_dssp HHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHH
T ss_pred HHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEHHHH
T ss_conf 98762335426622667760889998863033100001111023235999753431323136632565665411107764
Q ss_pred HH---HHHHCCCCCC-CCCCCCCC--CCCCCH-----HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHH-HHHHHHHCCC
Q ss_conf 99---9973787202-52100258--866200-----33245200120234652334345313117889-9999973378
Q T0636 157 DQ---LRQRAGKLLI-DETYVDYS--SFRARG-----LAYGENELVFRSFSKSYGLAGLRLGALFGPSE-LIAAMKRKQW 224 (336)
Q Consensus 157 ~~---l~~~~~~~Iv-DeaY~~f~--~~~~~~-----l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~-~i~~l~~~~~ 224 (336)
.+ ++++++.+|+ ||+|.+|. +....+ ....+|+|+++||||+|++||+|+||++++.+ +.+.+.+++.
T Consensus 179 ~~l~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~g~~~~~~~~~~~~~~~~~~ 258 (383)
T 3kax_A 179 TKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQY 258 (383)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 44431245624559997764443458987787311123454217998505455666632322100111344455677764
Q ss_pred ---CCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC--CCEEECCC-CCEEEEECC----CHHHHHHHH
Q ss_conf ---778777789999999745-9999999999999999999999858--97861698-647886569----889999999
Q T0636 225 ---FCNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGL--GYRVASSE-ANFVLVENA----AGERTLRFL 293 (336)
Q Consensus 225 ---~~~~~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~~l--g~~~~~s~-~~Fi~~~~~----~~~~~~~~L 293 (336)
..+.+...+.++..++.+ ..++++.+..+++.++.+.+.++.. ++++.+++ |.|+|++++ +++.+.+.|
T Consensus 259 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gg~f~w~~~~~~~~~~~~~~~~L 338 (383)
T 3kax_A 259 RQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDERTKLL 338 (383)
T ss_dssp HTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCCCHHHHHHHH
T ss_pred HCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEEECCCCCCCHHHHHHHH
T ss_conf 12434332202577888764032234455666668899999986344787167068805799998888899999999999
Q ss_pred HH-CCCEEEECCCCCC--CCEEEEEECCH-HHHHHHHHHHHHHH
Q ss_conf 87-6938960778888--87478874798-99999999999998
Q T0636 294 RE-RGIQVKDAGQFGL--HHHIRISIGRE-EDNDRLLAALAEYS 333 (336)
Q Consensus 294 ~~-~gi~vr~~~~fg~--~~~iRis~~~~-ee~~~l~~aL~~~~ 333 (336)
.+ +||.+.||+.||. ++|+|||++++ ++++..++.|+++.
T Consensus 339 ~e~~~V~v~PG~~Fg~~~~~~iRis~a~~~e~l~eal~RL~~~f 382 (383)
T 3kax_A 339 EEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp HHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 97499999766542889999699997389999999999999985
No 37
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, alternative splicing, aminotransferase, lyase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=0 Score=350.62 Aligned_cols=320 Identities=18% Similarity=0.275 Sum_probs=254.7
Q ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHH--HHHCCCC-CCHHHHHHHHHHHH----C--CCH-HHEEEECCHHHHHHH
Q ss_conf 665535735765488876899999999987--5005889-86189999999984----8--885-438860778899999
Q T0636 13 AAAQAVCLAFNENPEAVEPRVQAAIAAAAA--RINRYPF-DAEPRVMRKLAEHF----S--CPE-DNLMLVRGIDECFDR 82 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~p~~~v~~al~~~~~--~~~~Ypd-~~~~~Lr~aia~~~----~--v~~-d~I~~t~Gs~~~i~~ 82 (336)
..+++|+|+.++..++||+.+++++.+++. +.++|++ .|.++||++||+++ | +++ |+|++|+|++++|.+
T Consensus 21 ~~~~~I~L~~G~P~~~~~~~v~~a~~~~a~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~I~it~G~~~al~~ 100 (410)
T 3e2y_A 21 ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFN 100 (410)
T ss_dssp TSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHH
T ss_conf 89995887288899977999999999997176878889997899999999999999968999987669991786999999
Q ss_pred HHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC-----------CCCCCCHHHHHHH--CCHHHHHHHCCCCCC
Q ss_conf 99984--69925763887356999999818803641554-----------3567788999730--002431330366332
Q T0636 83 ISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT-----------DDLLLDPNDLAQV--SRDDCVVLANPSNPT 147 (336)
Q Consensus 83 ~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~-----------~~~~~d~~~l~~~--~~~~~i~l~nPnNPT 147 (336)
+++++ +||.|++++|+|+.|...+...|..++.+|.. +.+..|++++++. .+++++++|||||||
T Consensus 101 ~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~v~vp~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~l~~p~NPt 180 (410)
T 3e2y_A 101 SIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPL 180 (410)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTT
T ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCC
T ss_conf 99998388974876225551178999972764798145434433334555344689999997545688668748995987
Q ss_pred CCCCCHHHHHH---HHHHCCCCCC-CCCCCCCC--CCCCCHH----HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHH
Q ss_conf 22223799999---9973787202-52100258--8662003----3245200120234652334345313117889999
Q T0636 148 GQALSAGELDQ---LRQRAGKLLI-DETYVDYS--SFRARGL----AYGENELVFRSFSKSYGLAGLRLGALFGPSELIA 217 (336)
Q Consensus 148 G~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~--~~~~~~l----~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~ 217 (336)
|.+++.+++.+ ++++++.+|| ||+|.+|. +.....+ ...+++++++|+||.|++||+|+||+++++++++
T Consensus 181 G~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~v~~~~~i~ 260 (410)
T 3e2y_A 181 GKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIK 260 (410)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHHH
T ss_conf 75640999999999999869812021246555338854353755444345201034576534566255352031589999
Q ss_pred HHHHCC--CCCCCCHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECCC-
Q ss_conf 997337--8778777789999999745--------999999999999999999999985897861698-6478865698-
Q T0636 218 AMKRKQ--WFCNVGTLDLHALEAALDN--------DRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENAA- 285 (336)
Q Consensus 218 ~l~~~~--~~~~~~~~~~~aa~~~l~~--------~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~~- 285 (336)
.+.+.+ ..++++++.|.++..++.. .+++...++.+..+|+++.+.|+++|+++.+++ |+|+|++++.
T Consensus 261 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~L~~~g~~~~~P~gg~fiw~~l~~~ 340 (410)
T 3e2y_A 261 HLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSL 340 (410)
T ss_dssp HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGG
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCC
T ss_conf 99999875025689899999999999878887531367899999999998899999986796763688011997988122
Q ss_pred -------------HHHHHHH-HHHCCCEEEECCCCCC-------CCEEEEEECC-HHHHHHHHHHHHHH
Q ss_conf -------------8999999-9876938960778888-------8747887479-89999999999999
Q T0636 286 -------------GERTLRF-LRERGIQVKDAGQFGL-------HHHIRISIGR-EEDNDRLLAALAEY 332 (336)
Q Consensus 286 -------------~~~~~~~-L~~~gi~vr~~~~fg~-------~~~iRis~~~-~ee~~~l~~aL~~~ 332 (336)
+.++++. |+++||.|.||+.|+. ++|+|||++. ++++++.++.|+.|
T Consensus 341 ~~~~~~~~~~~~~~~~f~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRls~a~~~e~l~~a~~~l~a~ 409 (410)
T 3e2y_A 341 GADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAW 409 (410)
T ss_dssp CCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHHHTC
T ss_pred CCCHHHCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 676011024445699999999996999998064546788877879979999659999999999999851
No 38
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, lyase; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=0 Score=352.43 Aligned_cols=322 Identities=15% Similarity=0.271 Sum_probs=245.2
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHH------------HHHHHHCCCCC-CHHHHHHHHHHHH--------CCCHHHE
Q ss_conf 3665535735765488876899999999------------98750058898-6189999999984--------8885438
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAA------------AAARINRYPFD-AEPRVMRKLAEHF--------SCPEDNL 70 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~------------~~~~~~~Ypd~-~~~~Lr~aia~~~--------~v~~d~I 70 (336)
..+.++|+|+.++|++.. +.+.+.+.. ...+...|++. |.++||++||+++ .+++|+|
T Consensus 33 ~~p~~~i~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~i~~~~e~I 111 (428)
T 1iay_A 33 KNPNGVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERV 111 (428)
T ss_dssp SSTTSBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSC
T ss_pred CCCCCEEEECCCCCCCCH-HHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHE
T ss_conf 089874771467875441-3456554048167899875417834258999837099999999999998599999875449
Q ss_pred EEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHH-HCCCEEEECCC--CCCCCCHHHHHHH--------CCHHH
Q ss_conf 86077889999999984--699257638873569999998-18803641554--3567788999730--------00243
Q T0636 71 MLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAV-SGLRHFEIGLT--DDLLLDPNDLAQV--------SRDDC 137 (336)
Q Consensus 71 ~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~-~g~~~~~vp~~--~~~~~d~~~l~~~--------~~~~~ 137 (336)
++|+|++++|..+++++ +||.|++++|+|+.|...+.. .|++++.++++ ++|.+|.+++.+. .++++
T Consensus 112 ~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~~g~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~k~ 191 (428)
T 1iay_A 112 VMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKG 191 (428)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred EEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
T ss_conf 99389999999999997599698998289818899999996797589863244457643510335677777523788269
Q ss_pred HHHHCCCCCCCCCCCHHHHHH---HHHHCCCCCC-CCCCCCCC--CCCCCHH-----------HHCCCHHHHHHHHHHHC
Q ss_conf 133036633222223799999---9973787202-52100258--8662003-----------32452001202346523
Q T0636 138 VVLANPSNPTGQALSAGELDQ---LRQRAGKLLI-DETYVDYS--SFRARGL-----------AYGENELVFRSFSKSYG 200 (336)
Q Consensus 138 i~l~nPnNPTG~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~--~~~~~~l-----------~~~~n~iv~~S~SK~~g 200 (336)
+++||||||||.+++.+++.+ ++++++.+|| ||+|.+|. .....++ ...+++++++||||+||
T Consensus 192 i~l~~P~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 271 (428)
T 1iay_A 192 LILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMG 271 (428)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSS
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCEEEECCCHHHCC
T ss_conf 99878999986024168899987324551699998444333334665676877736043200235774799802704107
Q ss_pred CCCCCCEEECCC-HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCEEECCC
Q ss_conf 343453131178-899999973378778777789999999745999----999999999999999999985897861698
Q T0636 201 LAGLRLGALFGP-SELIAAMKRKQWFCNVGTLDLHALEAALDNDRA----REAHIAKTLAQRRRVADALRGLGYRVASSE 275 (336)
Q Consensus 201 l~GlRiG~~i~~-~~~i~~l~~~~~~~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~ 275 (336)
+||+|+||++++ +.+.+.+++......++.++|.++.+++....+ +++.++.+.++|+.+.+.|+..|+++.+++
T Consensus 272 ~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~p~ 351 (428)
T 1iay_A 272 LPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNN 351 (428)
T ss_dssp CGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCS
T ss_pred CCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
T ss_conf 96613799997059999999997156888868999999999670327888999999999999999999861898883589
Q ss_pred -CCEEEEECC---------CHHHHHHHH-HHCCCEEEECCCCCC--CCEEEEEECC--HHHHHHHHHHHHHHHH
Q ss_conf -647886569---------889999999-876938960778888--8747887479--8999999999999984
Q T0636 276 -ANFVLVENA---------AGERTLRFL-RERGIQVKDAGQFGL--HHHIRISIGR--EEDNDRLLAALAEYSD 334 (336)
Q Consensus 276 -~~Fi~~~~~---------~~~~~~~~L-~~~gi~vr~~~~fg~--~~~iRis~~~--~ee~~~l~~aL~~~~e 334 (336)
|.|+|++++ ++.++++.| .++||.|.||+.||. ++|+|||+++ +++++..++.|+++..
T Consensus 352 gg~f~w~~l~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~iRis~~~~~~~~l~~al~ri~~~lg 425 (428)
T 1iay_A 352 AGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp SSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 63599897731004577889999999999869999982233089999979999567999999999999999967
No 39
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=0 Score=347.33 Aligned_cols=327 Identities=14% Similarity=0.182 Sum_probs=240.5
Q ss_pred HHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHH----C--CCHHHEEEECCHHHH
Q ss_conf 8975036655357357654888768999999999875-00588986189999999984----8--885438860778899
Q T0636 7 MDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFDAEPRVMRKLAEHF----S--CPEDNLMLVRGIDEC 79 (336)
Q Consensus 7 ~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~~~~~Lr~aia~~~----~--v~~d~I~~t~Gs~~~ 79 (336)
..+..+.++++|+|+.++..||||+.+++|+.+++++ ..+|++ +.++||++||+++ | +++++|++|+|++++
T Consensus 23 ~~~~~~~g~~vi~l~ig~pdf~~p~~v~~al~~~~~~~~~~Y~~-g~~~lR~aia~~~~~~~g~~~~~~~I~it~G~~~a 101 (399)
T 1c7n_A 23 YSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTG-PTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPA 101 (399)
T ss_dssp HHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBC-CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHH
T ss_pred HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHH
T ss_conf 98767549986883078989998899999999998589868999-87999999999999984899992559986888999
Q ss_pred HHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC---CCCCCCHHHHHHH---CCHHHHHHHCCCCCCCCCC
Q ss_conf 99999984--69925763887356999999818803641554---3567788999730---0024313303663322222
Q T0636 80 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT---DDLLLDPNDLAQV---SRDDCVVLANPSNPTGQAL 151 (336)
Q Consensus 80 i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~---~~~~~d~~~l~~~---~~~~~i~l~nPnNPTG~~~ 151 (336)
|.++++++ +||.|++++|+|..|...+...|...+.++.. ..+.+|.+.++.. .+++++++||||||||.++
T Consensus 102 l~~~~~a~~~~gd~vlv~~p~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~l~~P~NPTG~v~ 181 (399)
T 1c7n_A 102 VFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVW 181 (399)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCC
T ss_pred HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf 99999998278977999705633589999971781365204554444577899999971288965999799979978008
Q ss_pred CHHHHHHH---HHHCCCCCC-CCCCCCCC--CCCCCHH-----HHCCCHHHHHHHHHHHCCCCCCCEEECCCHH-HHHHH
Q ss_conf 37999999---973787202-52100258--8662003-----3245200120234652334345313117889-99999
Q T0636 152 SAGELDQL---RQRAGKLLI-DETYVDYS--SFRARGL-----AYGENELVFRSFSKSYGLAGLRLGALFGPSE-LIAAM 219 (336)
Q Consensus 152 ~~~~l~~l---~~~~~~~Iv-DeaY~~f~--~~~~~~l-----~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~-~i~~l 219 (336)
+++++.+| +++++.+|| ||+|.+|. ....... ...++++++.||||.|++||+|+||++++++ +.+.+
T Consensus 182 s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~i~~~~ 261 (399)
T 1c7n_A 182 KKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERF 261 (399)
T ss_dssp CHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHH
T ss_pred CHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCHHHCCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCHHHHHHH
T ss_conf 79999987504455236886134532033037887732220455541368546764330067756346416809999999
Q ss_pred HHCCCCC-CC--CHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC--CCEEECCC-CCEEEEECC----CHHH
Q ss_conf 7337877-87--77789999999745-9999999999999999999999858--97861698-647886569----8899
Q T0636 220 KRKQWFC-NV--GTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGL--GYRVASSE-ANFVLVENA----AGER 288 (336)
Q Consensus 220 ~~~~~~~-~~--~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~~l--g~~~~~s~-~~Fi~~~~~----~~~~ 288 (336)
.+..... +. +...+.++....+. ..+.++..+.+.+.++.+.+.|+.. ++++.+++ |.|+|++++ ++.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~ 341 (399)
T 1c7n_A 262 TKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKA 341 (399)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHH
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCHHH
T ss_conf 99840102332102689999997643022100024678899999999998509970340788525898977788999999
Q ss_pred HHHHHH-HCCCEEEECCCCCC--CCEEEEEECCHHH-HHHHHHHHHHHHH
Q ss_conf 999998-76938960778888--8747887479899-9999999999984
Q T0636 289 TLRFLR-ERGIQVKDAGQFGL--HHHIRISIGREED-NDRLLAALAEYSD 334 (336)
Q Consensus 289 ~~~~L~-~~gi~vr~~~~fg~--~~~iRis~~~~ee-~~~l~~aL~~~~e 334 (336)
+.+.|. ++||.+.||+.||. ++|+|||++++++ ++..++.|+++++
T Consensus 342 ~~~~ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~e~l~eal~ri~~~l~ 391 (399)
T 1c7n_A 342 MEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALK 391 (399)
T ss_dssp HHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 99999986999996523428899987999982899999999999999999
No 40
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=0 Score=349.00 Aligned_cols=320 Identities=17% Similarity=0.207 Sum_probs=252.4
Q ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHH-----CC---CHHHEEEECCHHHHHHHH
Q ss_conf 66553573576548887689999999998750058898-6189999999984-----88---854388607788999999
Q T0636 13 AAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFD-AEPRVMRKLAEHF-----SC---PEDNLMLVRGIDECFDRI 83 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~-~~~~Lr~aia~~~-----~v---~~d~I~~t~Gs~~~i~~~ 83 (336)
.+.++|+|+.+++.||+|+.+++++.+++.+.++||+. |.++||++||+++ ++ ++++|++|+|+++++.++
T Consensus 28 ~g~~vi~l~~g~p~~~~p~~i~~al~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~ 107 (396)
T 3jtx_A 28 EGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSF 107 (396)
T ss_dssp TTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHH
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHH
T ss_conf 89986878898899987899999999987517899998789999999999999860798799877799827879999999
Q ss_pred HHHH--CCC-----CEEECCCCCHHHHHHHHHHCCCEEEECCC-CCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCH
Q ss_conf 9984--699-----25763887356999999818803641554-3567788999730--002431330366332222237
Q T0636 84 SAEF--SSM-----RFVTAWPGFDGYRARIAVSGLRHFEIGLT-DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSA 153 (336)
Q Consensus 84 ~~~~--~~~-----~vii~~P~y~~y~~~~~~~g~~~~~vp~~-~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~ 153 (336)
+.++ +|| .++++.|+|+.+.......+.....++.. +++.+|.++++.. .+++++++||||||||.+++.
T Consensus 108 ~~~~~~pgd~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~k~~~l~~P~NPtG~~~s~ 187 (396)
T 3jtx_A 108 VQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDL 187 (396)
T ss_dssp HHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCH
T ss_conf 98623566666520597358644300000221266333467777677879999975421475599808986988771568
Q ss_pred HHHHHH---HHHCCCCCC-CCCCCCCC--CCCCCH--------HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
Q ss_conf 999999---973787202-52100258--866200--------3324520012023465233434531311788999999
Q T0636 154 GELDQL---RQRAGKLLI-DETYVDYS--SFRARG--------LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAM 219 (336)
Q Consensus 154 ~~l~~l---~~~~~~~Iv-DeaY~~f~--~~~~~~--------l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l 219 (336)
+++.+| +++++.+|+ ||+|.++. +....+ ....+++++++|+||.|++||+|+||+++++++++.+
T Consensus 188 e~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlR~G~~i~~~~~~~~~ 267 (396)
T 3jtx_A 188 DGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNF 267 (396)
T ss_dssp HHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHCCEEEEEECCHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHH
T ss_conf 99999999987536435762021002047887760443111035665126999157522068773116676499999999
Q ss_pred HHCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECC--CHHHHHHH-HH
Q ss_conf 73378--778777789999999745999999999999999999999985897861698647886569--88999999-98
Q T0636 220 KRKQW--FCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENA--AGERTLRF-LR 294 (336)
Q Consensus 220 ~~~~~--~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~--~~~~~~~~-L~ 294 (336)
.+... .++.+...|.++.+++....++...++.+.++|+++.+.|+++.-...|.+|+|+|++++ ++.++.+. |.
T Consensus 268 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~p~gg~~lw~~~~~~~~~~~~~~ll~ 347 (396)
T 3jtx_A 268 LLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPDGDDLAFARNLWQ 347 (396)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCSSSSEEEEECTTSCHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 99755302455599999999974222113333577799999999999865885588832189998999999999999999
Q ss_pred HCCCEEEECCCCCC--------CCEEEEEECCH-HHHHHHHHHHHHH
Q ss_conf 76938960778888--------87478874798-9999999999999
Q T0636 295 ERGIQVKDAGQFGL--------HHHIRISIGRE-EDNDRLLAALAEY 332 (336)
Q Consensus 295 ~~gi~vr~~~~fg~--------~~~iRis~~~~-ee~~~l~~aL~~~ 332 (336)
++||.|.||+.|+. ++|+|+|++.+ ++++..++.|+++
T Consensus 348 ~~gV~v~PG~~F~~~~~~g~~g~~~iRls~~~~~e~l~ea~~Ri~~~ 394 (396)
T 3jtx_A 348 KAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSL 394 (396)
T ss_dssp HHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHH
T ss_pred HCCEEEECCHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 78999976455267766688889979999748899999999999997
No 41
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=0 Score=347.35 Aligned_cols=319 Identities=21% Similarity=0.269 Sum_probs=252.2
Q ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCC-CHHHHHHHHHHHH----CC--CHH-HEEEECCHHHHHHHH
Q ss_conf 6655357357654888768999999999875-0058898-6189999999984----88--854-388607788999999
Q T0636 13 AAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRYPFD-AEPRVMRKLAEHF----SC--PED-NLMLVRGIDECFDRI 83 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-~~~Ypd~-~~~~Lr~aia~~~----~v--~~d-~I~~t~Gs~~~i~~~ 83 (336)
...++|+|+.+...||||+.+++++++++.+ .++|++. |.++||++||+++ |+ ++| +|++|+|+++++.++
T Consensus 28 ~~~~~i~L~~G~Pd~~~p~~l~~al~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~ 107 (386)
T 1u08_A 28 QQHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAA 107 (386)
T ss_dssp HHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHH
T ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
T ss_conf 58997886488899977899999999998549988989878899999999999997299999877699826616778899
Q ss_pred HHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC-CCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 9984--69925763887356999999818803641554-3567788999730--00243133036633222223799999
Q T0636 84 SAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT-DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQ 158 (336)
Q Consensus 84 ~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~-~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~ 158 (336)
+.++ +||.|++++|+|..|.......+..+...+.. .++..|.+++++. .+++++++||||||||++++.+++++
T Consensus 108 ~~~l~~~gd~vl~~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~~~~~~~~~~ 187 (386)
T 1u08_A 108 ITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAA 187 (386)
T ss_dssp HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 88762468559860354301567887641223333321322468999973221257318998789878854555421233
Q ss_pred H---HHHCCCCCC-CCCCCCC--CCCCC-CH---HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCC--CC
Q ss_conf 9---973787202-5210025--88662-00---332452001202346523343453131178899999973378--77
Q T0636 159 L---RQRAGKLLI-DETYVDY--SSFRA-RG---LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW--FC 226 (336)
Q Consensus 159 l---~~~~~~~Iv-DeaY~~f--~~~~~-~~---l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~--~~ 226 (336)
+ ++++..+++ ||.|..+ .+... .. ....+|+|+++||||.|++||+|+||+++++++++.+.+.+. .+
T Consensus 188 l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~v~p~~~~~~~~~~~~~~~~ 267 (386)
T 1u08_A 188 LWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTF 267 (386)
T ss_dssp HHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTS
T ss_pred HHHHCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 32210344320243022021024334554322345456743897414565457766532202330467888752022323
Q ss_pred CCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC-CEEEEECC-----CHHHHHHH-HHHCCC
Q ss_conf 8777789999999745-9999999999999999999999858978616986-47886569-----88999999-987693
Q T0636 227 NVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLGYRVASSEA-NFVLVENA-----AGERTLRF-LRERGI 298 (336)
Q Consensus 227 ~~~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~-~Fi~~~~~-----~~~~~~~~-L~~~gi 298 (336)
+.+.++|.++..++.+ .+++++.++.+.+.|+.+.+.+++.|+++.+++| .|+|++++ ++.++.+. |.++||
T Consensus 268 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p~Gg~~lwv~~~~~~~~~~~~~~~~ll~e~gV 347 (386)
T 1u08_A 268 SVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGV 347 (386)
T ss_dssp SCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCE
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCE
T ss_conf 45643332233222230677778999876533667888876386683689457998956888999999999999997999
Q ss_pred EEEECCCCCC----CCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 8960778888----8747887479899999999999998
Q T0636 299 QVKDAGQFGL----HHHIRISIGREEDNDRLLAALAEYS 333 (336)
Q Consensus 299 ~vr~~~~fg~----~~~iRis~~~~ee~~~l~~aL~~~~ 333 (336)
.|+||+.|+. ++|+|+|+++++| .+.+|++++.
T Consensus 348 ~v~PG~~Fg~~~~~~~~iRls~a~~~e--~l~eai~Rl~ 384 (386)
T 1u08_A 348 AAIPLSVFCADPFPHKLIRLCFAKKES--TLLAAAERLR 384 (386)
T ss_dssp ECEEGGGGCSSCCCSCEEEEECCSCHH--HHHHHHHHHT
T ss_pred EEECCHHHCCCCCCCCEEEEEECCCHH--HHHHHHHHHC
T ss_conf 998215637899989889999819999--9999999970
No 42
>3ele_A Amino transferase; RER070207001803, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=0 Score=354.28 Aligned_cols=325 Identities=19% Similarity=0.287 Sum_probs=252.1
Q ss_pred HCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-----HHCCCCC-CHHHHHHHHHHHH----C--CCHHHEEEECCHHH
Q ss_conf 036655357357654888768999999999875-----0058898-6189999999984----8--88543886077889
Q T0636 11 VRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-----INRYPFD-AEPRVMRKLAEHF----S--CPEDNLMLVRGIDE 78 (336)
Q Consensus 11 ~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~-----~~~Ypd~-~~~~Lr~aia~~~----~--v~~d~I~~t~Gs~~ 78 (336)
..+..++|+|+.+++++|+|+.+++++.+++.+ +++||+. |.++||++||+++ | +++|+|++|+|+++
T Consensus 31 ~~g~~~vi~ls~G~p~~~~p~~v~~a~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~~~~g~~~~~d~I~it~G~~~ 110 (398)
T 3ele_A 31 IVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAA 110 (398)
T ss_dssp HHCGGGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHH
T ss_pred HCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCH
T ss_conf 63999868999989999989999999999985765556669899878999999999999986397635552278621102
Q ss_pred HHHHHHHHHC--C-CCEEECCCCCHHHHHHHHHHCCCEEEECCC-CCCCCCHHHHHHHC--CHHHHHHHCCCCCCCCCCC
Q ss_conf 9999999846--9-925763887356999999818803641554-35677889997300--0243133036633222223
Q T0636 79 CFDRISAEFS--S-MRFVTAWPGFDGYRARIAVSGLRHFEIGLT-DDLLLDPNDLAQVS--RDDCVVLANPSNPTGQALS 152 (336)
Q Consensus 79 ~i~~~~~~~~--~-~~vii~~P~y~~y~~~~~~~g~~~~~vp~~-~~~~~d~~~l~~~~--~~~~i~l~nPnNPTG~~~~ 152 (336)
+|.++++++. | |.|+++.|+|+.|...+...|..+..++.. +++.+|++.+.+.. +++++++||||||||.+++
T Consensus 111 al~~~~~~l~~~g~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptg~~~~ 190 (398)
T 3ele_A 111 SLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYS 190 (398)
T ss_dssp HHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCC
T ss_pred HHCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 11101232012346644021011024567888736864145420222456889999875146643234544567754333
Q ss_pred HHHHHHH---HHHCC------C-CCCCCCCCCCCCCC--CCHH-HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
Q ss_conf 7999999---97378------7-20252100258866--2003-324520012023465233434531311788999999
Q T0636 153 AGELDQL---RQRAG------K-LLIDETYVDYSSFR--ARGL-AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAM 219 (336)
Q Consensus 153 ~~~l~~l---~~~~~------~-~IvDeaY~~f~~~~--~~~l-~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l 219 (336)
.+++.++ +++++ + +|.||+|.+|.... .... ...++.+|++|+||.|++||+|+||+++++++++.+
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~~i~ii~De~y~~~~~~~~~~~~~~~~~~~~iv~~s~sK~~~~~G~RiG~~~~~~~~~~~~ 270 (398)
T 3ele_A 191 EETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKA 270 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHH
T ss_pred CCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 33322210145565541465215663021202222334433333345664354056631146755531246889999877
Q ss_pred HHCCCCCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC--CHHHHHH
Q ss_conf 733787787777-----89999999745999999999999999999999985897861698-647886569--8899999
Q T0636 220 KRKQWFCNVGTL-----DLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA--AGERTLR 291 (336)
Q Consensus 220 ~~~~~~~~~~~~-----~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~--~~~~~~~ 291 (336)
...+..++.+.. .............++.+....+.+.|+.+.+.|+++|+++++++ |+|+|++.+ +++.+.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~ 350 (398)
T 3ele_A 271 ELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATGDINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALEDDSNAFCE 350 (398)
T ss_dssp HHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCCCHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSSSCHHHHHH
T ss_pred HHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCHHHHHH
T ss_conf 54421203441012010037788777765434567999999999999999866977636894189989799999999999
Q ss_pred HHHHCCCEEEECCCCCCCCEEEEEECC-HHHHHHHHHHHHHHHHC
Q ss_conf 998769389607788888747887479-89999999999999842
Q T0636 292 FLRERGIQVKDAGQFGLHHHIRISIGR-EEDNDRLLAALAEYSDH 335 (336)
Q Consensus 292 ~L~~~gi~vr~~~~fg~~~~iRis~~~-~ee~~~l~~aL~~~~e~ 335 (336)
.|+++||.++||+.||.++|+|+|++. ++++++.+++|++++++
T Consensus 351 ~l~~~gV~v~pG~~Fg~~~~vRls~~~~~e~i~~al~~l~~~l~~ 395 (398)
T 3ele_A 351 KAKEEDVLIVAADGFGCPGWVRISYCVDREMIKHSMPAFEKIYKK 395 (398)
T ss_dssp HHHTTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 999699999917757999949999828999999999999999998
No 43
>1wst_A MSAT, multiple substrate aminotransferase; alpha and beta; HET: PLP; 1.95A {Thermococcus profundus} SCOP: c.67.1.1 PDB: 1x0m_A
Probab=100.00 E-value=0 Score=340.50 Aligned_cols=320 Identities=17% Similarity=0.168 Sum_probs=238.7
Q ss_pred CCCCCEECCCCCCC--CCCCHHHHHHHHHHHH----HHHCCCCC-CHHHHHHHHHHHH----C--CCHHHEEEECCHHHH
Q ss_conf 66553573576548--8876899999999987----50058898-6189999999984----8--885438860778899
Q T0636 13 AAAQAVCLAFNENP--EAVEPRVQAAIAAAAA----RINRYPFD-AEPRVMRKLAEHF----S--CPEDNLMLVRGIDEC 79 (336)
Q Consensus 13 ~~~~~i~L~~Nenp--~~p~~~v~~al~~~~~----~~~~Ypd~-~~~~Lr~aia~~~----~--v~~d~I~~t~Gs~~~ 79 (336)
..+++|+|+.+.+. ..|++.+.+++.+++. ++.+|++. |.++||++||+++ | +++|+|++|+|++++
T Consensus 39 ~~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~it~G~~~a 118 (417)
T 1wst_A 39 ETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQA 118 (417)
T ss_dssp TSSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHHHHHCCCCTTCEEEEESSHHHH
T ss_pred CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHH
T ss_conf 89997889886789410699999999999997376002588998674999999999999984898764058853640278
Q ss_pred HHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHH----HH---H-CCH-HHHHHHCCCCCCC
Q ss_conf 99999984--699257638873569999998188036415543567788999----73---0-002-4313303663322
Q T0636 80 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDL----AQ---V-SRD-DCVVLANPSNPTG 148 (336)
Q Consensus 80 i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l----~~---~-~~~-~~i~l~nPnNPTG 148 (336)
|.+++.++ +||.|++++|+|+.|...++..|.+++.++.+++ ..+.+.. .. . .+. .+++++|||||||
T Consensus 119 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG 197 (417)
T 1wst_A 119 LDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDK-GMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAG 197 (417)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCCCEEEECCSSCTTTC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999998631234556688711335676412553025631533-23320000012222122333322233245688878
Q ss_pred CCCCHHHHHHH---HHHCCCCCC-CCCCCCCC--CCCCCHH---HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
Q ss_conf 22237999999---973787202-52100258--8662003---324520012023465233434531311788999999
Q T0636 149 QALSAGELDQL---RQRAGKLLI-DETYVDYS--SFRARGL---AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAM 219 (336)
Q Consensus 149 ~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~--~~~~~~l---~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l 219 (336)
.+++.+++++| +++++.+|| ||+|.+|. +....++ ...+|+++++||||+|+ ||+|+||+++++++++.+
T Consensus 198 ~~~s~e~l~~i~~la~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~-~G~RiG~~~~~~~~i~~~ 276 (417)
T 1wst_A 198 VTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILA-PGFRIGWVAAHPHLIRKM 276 (417)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCC-CCCCEECCCCHHHHHHHH
T ss_conf 7788999999998765058577445441331058898871013677863999876435638-878600011138899999
Q ss_pred HHCCC--CCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHC---CCEEECC-CCCEEEEECC---CHH
Q ss_conf 73378--778777789999999745---9999999999999999999999858---9786169-8647886569---889
Q T0636 220 KRKQW--FCNVGTLDLHALEAALDN---DRAREAHIAKTLAQRRRVADALRGL---GYRVASS-EANFVLVENA---AGE 287 (336)
Q Consensus 220 ~~~~~--~~~~~~~~~~aa~~~l~~---~~~~~~~~~~~~~~r~~l~~~l~~l---g~~~~~s-~~~Fi~~~~~---~~~ 287 (336)
.+... ....+...|.++..++.. ..++++.++.+..+++.+.+.+.+. |+++.++ +|+|+|++++ +++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~g~~~~~p~gg~f~~~~l~~~~d~~ 356 (417)
T 1wst_A 277 EIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTK 356 (417)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECCTTCCTT
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCHH
T ss_conf 99975301233430234455430244204778888999999999999998763668728816881369999899999999
Q ss_pred HHHHHHHHCCCEEEECCCCCC----CCEEEEEEC--CHHHHH----HHHHHHHHHHH
Q ss_conf 999999876938960778888----874788747--989999----99999999984
Q T0636 288 RTLRFLRERGIQVKDAGQFGL----HHHIRISIG--REEDND----RLLAALAEYSD 334 (336)
Q Consensus 288 ~~~~~L~~~gi~vr~~~~fg~----~~~iRis~~--~~ee~~----~l~~aL~~~~e 334 (336)
.+.+.|.++||+|+||+.|+. ++|+|||++ ++++++ +|.++|+|.++
T Consensus 357 ~~~~~l~~~gV~v~pG~~F~~~~~~~~~iRls~~~~~~e~l~~a~~rl~~~l~e~~k 413 (417)
T 1wst_A 357 LMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMK 413 (417)
T ss_dssp TTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999978979993367478999899799995669999999999999999999998
No 44
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus HB27} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=0 Score=337.19 Aligned_cols=318 Identities=17% Similarity=0.177 Sum_probs=246.1
Q ss_pred CCCEECCCCCC-C-CCCCHHHHHHHHHHHH----HHHCCCC-CCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH
Q ss_conf 55357357654-8-8876899999999987----5005889-86189999999984888543886077889999999984
Q T0636 15 AQAVCLAFNEN-P-EAVEPRVQAAIAAAAA----RINRYPF-DAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF 87 (336)
Q Consensus 15 ~~~i~L~~Nen-p-~~p~~~v~~al~~~~~----~~~~Ypd-~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~ 87 (336)
+++|+|+.++. | +.|++.+.+++.+++. ...+|++ .|.++||++||+++++++|+|++|+|+++++.+++.++
T Consensus 32 ~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~~ia~~~~~~~~~I~it~G~~~al~~~~~~l 111 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVF 111 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHH
T ss_pred CCCEECCCCCCCCHHCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHH
T ss_conf 99688999789911279899999999999717844237898737099999998204977789898378699999999996
Q ss_pred --CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHC---C-HHHHHHHCCCCCCCCCCCHHHHHHH--
Q ss_conf --6992576388735699999981880364155435677889997300---0-2431330366332222237999999--
Q T0636 88 --SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVS---R-DDCVVLANPSNPTGQALSAGELDQL-- 159 (336)
Q Consensus 88 --~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~---~-~~~i~l~nPnNPTG~~~~~~~l~~l-- 159 (336)
+||+|++++|+|+.|...++..|.+++.+|..++ ..+.+.+.... + ..+++++|||||||.+++.+++.++
T Consensus 112 ~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~NPtg~~~~~~~~~~~~~ 190 (397)
T 2zyj_A 112 LDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQ 190 (397)
T ss_dssp CCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHH
T ss_pred CCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCC-CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 289987875799732379999864973212216432-2234789999850668589996785245775566443211100
Q ss_pred -HHHCCC-CCCCCCCCCCC--CCCCCHH------HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCC--CCC
Q ss_conf -973787-20252100258--8662003------32452001202346523343453131178899999973378--778
Q T0636 160 -RQRAGK-LLIDETYVDYS--SFRARGL------AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW--FCN 227 (336)
Q Consensus 160 -~~~~~~-~IvDeaY~~f~--~~~~~~l------~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~--~~~ 227 (336)
++++.. +|+||+|.++. +....++ ...+|+++++||||.++ ||+|+||+++++++++.+.+... ..+
T Consensus 191 ~~~~~~~~li~dd~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~-~GlRiG~~i~~~~~i~~l~~~~~~~~~~ 269 (397)
T 2zyj_A 191 MVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQGADLH 269 (397)
T ss_dssp HHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHHHHSS
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 012038740122232101368888875888644531362489616775778-8887561467999999999998524467
Q ss_pred CCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEC-CCCCEEEEECC---CHHHHHHHHHHCCC
Q ss_conf 777789999999745--9999999999999999999999858---978616-98647886569---88999999987693
Q T0636 228 VGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL---GYRVAS-SEANFVLVENA---AGERTLRFLRERGI 298 (336)
Q Consensus 228 ~~~~~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~l---g~~~~~-s~~~Fi~~~~~---~~~~~~~~L~~~gi 298 (336)
.+.+.|.++..++.+ ..+++..++.+.+.|+.+.+.|+.. ++++.+ .+|+|+|++++ +++.+++.|.++||
T Consensus 270 ~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~L~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~~~~~~l~~~gV 349 (397)
T 2zyj_A 270 TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENV 349 (397)
T ss_dssp CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCE
T ss_conf 86699999999998187114999999999999999999997567771551799525999989999899999999997896
Q ss_pred EEEECCCCCC----CCEEEEEEC--CHHHHHHHHHHHHHHHH
Q ss_conf 8960778888----874788747--98999999999999984
Q T0636 299 QVKDAGQFGL----HHHIRISIG--REEDNDRLLAALAEYSD 334 (336)
Q Consensus 299 ~vr~~~~fg~----~~~iRis~~--~~ee~~~l~~aL~~~~e 334 (336)
.++||+.|+. ++|+|||++ +.++++..++.|+++.+
T Consensus 350 ~v~pg~~F~~~~~~~~~iRis~~~~~~e~l~~a~~rl~~~l~ 391 (397)
T 2zyj_A 350 AFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALK 391 (397)
T ss_dssp EEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 999446637899989989999576999999999999999999
No 45
>3if2_A Aminotransferase; YP_265399.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=0 Score=343.38 Aligned_cols=328 Identities=18% Similarity=0.206 Sum_probs=234.4
Q ss_pred HHHHHHCCCCCCEECCCCCC-CCCCCHHHHHHHHHHH-H-------------HHHCCCCC-CHHHHHHHHHHHH------
Q ss_conf 78975036655357357654-8887689999999998-7-------------50058898-6189999999984------
Q T0636 6 AMDTEVRAAAQAVCLAFNEN-PEAVEPRVQAAIAAAA-A-------------RINRYPFD-AEPRVMRKLAEHF------ 63 (336)
Q Consensus 6 ~~~~~~~~~~~~i~L~~Nen-p~~p~~~v~~al~~~~-~-------------~~~~Ypd~-~~~~Lr~aia~~~------ 63 (336)
.+......+.++|+|+.+.+ ++|.+..+..+..+.+ . .+.+|+++ |.++||++||+++
T Consensus 23 ~l~~~~~~~~~~i~l~~G~P~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~ 102 (444)
T 3if2_A 23 DLGDALKSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDW 102 (444)
T ss_dssp HHHHHHHSSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99878757998688999898889876799999999861754345554420321262899867999999999999998589
Q ss_pred CCCHHHEEEECCHHHHHHHHHHHHC-----------------CCCEEECCCCCHHHHHHHHHHCCCEEEECCCC------
Q ss_conf 8885438860778899999999846-----------------99257638873569999998188036415543------
Q T0636 64 SCPEDNLMLVRGIDECFDRISAEFS-----------------SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD------ 120 (336)
Q Consensus 64 ~v~~d~I~~t~Gs~~~i~~~~~~~~-----------------~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~------ 120 (336)
.+++|+|++|+|++++|.+++++++ ++.|++++|+|+.|...+...|..+..+|...
T Consensus 103 ~~~~e~I~it~G~~~al~~~~~~l~~~~~~~~~~~~~~~~~~~~~vl~~~P~y~~~~~~~~~~~~~~~~~p~~~~~~~~~ 182 (444)
T 3if2_A 103 NLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDG 182 (444)
T ss_dssp CCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETT
T ss_pred CCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 99810299968889999999999974202443222223479996899678765338999998698577523402456662
Q ss_pred -----CCCCCHHHHHH-----HCCHHHHHHHCCCCCCCCCCCHHHHHH---HHHHCCCCC-CCCCCCCCCCCCC---CHH
Q ss_conf -----56778899973-----000243133036633222223799999---997378720-2521002588662---003
Q T0636 121 -----DLLLDPNDLAQ-----VSRDDCVVLANPSNPTGQALSAGELDQ---LRQRAGKLL-IDETYVDYSSFRA---RGL 183 (336)
Q Consensus 121 -----~~~~d~~~l~~-----~~~~~~i~l~nPnNPTG~~~~~~~l~~---l~~~~~~~I-vDeaY~~f~~~~~---~~l 183 (336)
.|++|++++++ ..+++++++||||||||.+++.+++.+ +|++++.+| +||+|.+|..... ...
T Consensus 183 ~~~~~~~~~d~e~le~~~~~~~~~~k~i~l~nP~NPTG~~~s~~~l~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~ 262 (444)
T 3if2_A 183 EEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHL 262 (444)
T ss_dssp EEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCC
T ss_conf 12566432679999999971688965999899969968027899999998775404216886645443345541111001
Q ss_pred HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHHH---HHHHHHH-HHHHHH
Q ss_conf 324520012023465233434531311788999999733787--7877778999999974599---9999999-999999
Q T0636 184 AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF--CNVGTLDLHALEAALDNDR---AREAHIA-KTLAQR 257 (336)
Q Consensus 184 ~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~--~~~~~~~~~aa~~~l~~~~---~~~~~~~-~~~~~r 257 (336)
...+++|+++|||| |++||+|+||+++++++++.+.+.+.. ++.+.+.|.++..++.... +..+.++ .+.++|
T Consensus 263 ~~~~~vi~~~s~SK-~~~~G~RiG~~v~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (444)
T 3if2_A 263 NWDNNTILCFSLSK-IGLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQA 341 (444)
T ss_dssp CCCTTEEEEEESTT-TTCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHH
T ss_pred CCCCEEEEECCCCC-CCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 45640444125554-45677740054521999999997521036665569999999975201455668888998899999
Q ss_pred HHHHHHHHH----CCCEEEC-CCCCEEEEECC----CHHHHHHHHHHCCCEEEECCCCC----------CCCEEEEEECC
Q ss_conf 999999985----8978616-98647886569----88999999987693896077888----------88747887479
Q T0636 258 RRVADALRG----LGYRVAS-SEANFVLVENA----AGERTLRFLRERGIQVKDAGQFG----------LHHHIRISIGR 318 (336)
Q Consensus 258 ~~l~~~l~~----lg~~~~~-s~~~Fi~~~~~----~~~~~~~~L~~~gi~vr~~~~fg----------~~~~iRis~~~ 318 (336)
+.+.+.|++ .++.+.. .+|+|+|++++ ++.++++.|.++||.|+||+.|+ .++|+|+|++.
T Consensus 342 ~~~~~~l~~~~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~g~~~~~~~~~~~~vRls~~~ 421 (444)
T 3if2_A 342 TLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA 421 (444)
T ss_dssp HHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS
T ss_pred HHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 99999999752516836825894079999889999899999999996890999760027753335667789979999558
Q ss_pred -HHHHHHHHHHHHHHHH
Q ss_conf -8999999999999984
Q T0636 319 -EEDNDRLLAALAEYSD 334 (336)
Q Consensus 319 -~ee~~~l~~aL~~~~e 334 (336)
++++++.++.|+++.+
T Consensus 422 ~~e~l~~~i~~l~~~l~ 438 (444)
T 3if2_A 422 DEQTLIDGIKVIGEVVR 438 (444)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999
No 46
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=0 Score=334.76 Aligned_cols=333 Identities=15% Similarity=0.145 Sum_probs=249.9
Q ss_pred CHHHHHHHHHCCCCCCEECCCCC-CCCCCCHHHH-HHHHHHHH---HHHCCCCC-CHHHHHHHHHHHH------CCCHHH
Q ss_conf 51157897503665535735765-4888768999-99999987---50058898-6189999999984------888543
Q T0636 2 SVGEAMDTEVRAAAQAVCLAFNE-NPEAVEPRVQ-AAIAAAAA---RINRYPFD-AEPRVMRKLAEHF------SCPEDN 69 (336)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~L~~Ne-np~~p~~~v~-~al~~~~~---~~~~Ypd~-~~~~Lr~aia~~~------~v~~d~ 69 (336)
.|.+.+++.+..++++|+|+.++ +|..+|..+. +++.+.+. ..++|++. |.++||+++|+++ ++++|+
T Consensus 21 ~i~~~a~~~~~~G~~vi~l~~G~P~~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~ 100 (407)
T 2zc0_A 21 DVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELREELAAFLKKYDHLEVSPEN 100 (407)
T ss_dssp HHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGSCCCTTCCHHHHHHHHHHHHHHSCCCCCGGG
T ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99999999996799818788945896216899999999999855966677699856199999999999997299978668
Q ss_pred EEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHH-------HH--CCHHHH
Q ss_conf 886077889999999984--6992576388735699999981880364155435677889997-------30--002431
Q T0636 70 LMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLA-------QV--SRDDCV 138 (336)
Q Consensus 70 I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~-------~~--~~~~~i 138 (336)
|++|+|+++++..+++++ +|+.++++.|+|+.|.......|..+..+|++++. .+...+. .. ...+++
T Consensus 101 I~~~~G~~~~~~~~~~~~~~~g~~v~v~~p~~~~~~~~~~~~~~~~~~vp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 179 (407)
T 2zc0_A 101 IVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIY 179 (407)
T ss_dssp EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHCCCCEEEEEECCCC-CCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 8992789999999999845899842125887641456665237630346514665-542001346777764156644999
Q ss_pred HHHCCCCCCCCCCCHHHHHHH---HHHCCCCCC-CCCCCCCC--CCCCCHH--HHCCCHHHHHHHHHHHCCCCCCCEEEC
Q ss_conf 330366332222237999999---973787202-52100258--8662003--324520012023465233434531311
Q T0636 139 VLANPSNPTGQALSAGELDQL---RQRAGKLLI-DETYVDYS--SFRARGL--AYGENELVFRSFSKSYGLAGLRLGALF 210 (336)
Q Consensus 139 ~l~nPnNPTG~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~--~~~~~~l--~~~~n~iv~~S~SK~~gl~GlRiG~~i 210 (336)
++||||||||.+++.+++.+| +++++.+|| ||+|.+|. +....+. ...++.+++.|+||.+++||+|+||++
T Consensus 180 ~~~~p~NPtG~~~s~e~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlR~G~~v 259 (407)
T 2zc0_A 180 TIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWII 259 (407)
T ss_dssp ECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEE
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 76899998673068999999999999769189983531220358887664101362125455687778868987632253
Q ss_pred CCHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHC--CCEEE-CCCCCEEEE
Q ss_conf 788999999733787--78777789999999745999----9999999999999999999858--97861-698647886
Q T0636 211 GPSELIAAMKRKQWF--CNVGTLDLHALEAALDNDRA----REAHIAKTLAQRRRVADALRGL--GYRVA-SSEANFVLV 281 (336)
Q Consensus 211 ~~~~~i~~l~~~~~~--~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~r~~l~~~l~~l--g~~~~-~s~~~Fi~~ 281 (336)
+++++++.+.+.... .+++.++|.++..++.+..+ .+..+..++++++.+.+.|.+. ++.+. |..|+|+|+
T Consensus 260 ~~~~~i~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~p~gg~f~~~ 339 (407)
T 2zc0_A 260 AEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMF 339 (407)
T ss_dssp CCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEE
T ss_conf 58999999999977650368849999999999736335678888888999999999999983389856727997359999
Q ss_pred ECC---CHHHHHHHH-HHCCCEEEECCCCCC----CCEEEEEEC--CHHHHHHHHHHHHHHHHC
Q ss_conf 569---889999999-876938960778888----874788747--989999999999999842
Q T0636 282 ENA---AGERTLRFL-RERGIQVKDAGQFGL----HHHIRISIG--REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 282 ~~~---~~~~~~~~L-~~~gi~vr~~~~fg~----~~~iRis~~--~~ee~~~l~~aL~~~~e~ 335 (336)
+++ ++.++++.| .++||.++||+.|+. ++|+|||++ +++++++.+++|+++..+
T Consensus 340 ~l~~~~~~~~~~~~ll~~~gV~v~PGs~F~~~~~~~~~iRis~~~~~~e~l~~al~rl~~~~~e 403 (407)
T 2zc0_A 340 FLPEGADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp ECSTTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 8999989999999999979999992355278999899799995879999999999999999999
No 47
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, SGC, alternative splicing, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=0 Score=336.43 Aligned_cols=319 Identities=17% Similarity=0.205 Sum_probs=223.4
Q ss_pred CCCEECCCCCC-CCC--C----------------------CHHHHHHHHHHHH-----HHHCCCCC-CHHHHHHHHHHHH
Q ss_conf 55357357654-888--7----------------------6899999999987-----50058898-6189999999984
Q T0636 15 AQAVCLAFNEN-PEA--V----------------------EPRVQAAIAAAAA-----RINRYPFD-AEPRVMRKLAEHF 63 (336)
Q Consensus 15 ~~~i~L~~Nen-p~~--p----------------------~~~v~~al~~~~~-----~~~~Ypd~-~~~~Lr~aia~~~ 63 (336)
.++|+||.+++ ++| | |..+++++.+.+. ....|+++ |.++||++||+|+
T Consensus 63 ~~ii~~~iG~P~~~g~~p~~f~r~v~~~~~~p~l~~~~~~P~~~~~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~ 142 (498)
T 3ihj_A 63 TEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYI 142 (498)
T ss_dssp SSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHH
T ss_pred CCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 61678348785101799507999999861375557877898999999999998536999897599704299999999999
Q ss_pred -----C--CCHHHEEEECCHHHHHHHHHHHH--CCCC----EEECCCCCHHHHHHHHHHCCCEEEECCCC--CCCCCHHH
Q ss_conf -----8--88543886077889999999984--6992----57638873569999998188036415543--56778899
Q T0636 64 -----S--CPEDNLMLVRGIDECFDRISAEF--SSMR----FVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPND 128 (336)
Q Consensus 64 -----~--v~~d~I~~t~Gs~~~i~~~~~~~--~~~~----vii~~P~y~~y~~~~~~~g~~~~~vp~~~--~~~~d~~~ 128 (336)
| +++|+|++|+|++++|.++++++ +||+ |++++|+|+.|...++.+|..++.+++++ +|.+|+++
T Consensus 143 ~~r~~g~~~~pd~I~iT~Ga~~al~~~~~~l~~pGD~~~~~Vlvp~P~Y~~y~~~~~~~g~~~v~v~l~~e~~~~~d~~~ 222 (498)
T 3ihj_A 143 TRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNE 222 (498)
T ss_dssp HHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHH
T ss_pred HHHHCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCHHCCCCCCHHH
T ss_conf 98518999864539992888999999999725899766656999458716699999985988998402512076779999
Q ss_pred HHHH-------CCHHHHHHHCCCCCCCCCCCHHHHHHH---HHHCCCCCC-CCCCCCCC--CC-CCCHH-----------
Q ss_conf 9730-------002431330366332222237999999---973787202-52100258--86-62003-----------
Q T0636 129 LAQV-------SRDDCVVLANPSNPTGQALSAGELDQL---RQRAGKLLI-DETYVDYS--SF-RARGL----------- 183 (336)
Q Consensus 129 l~~~-------~~~~~i~l~nPnNPTG~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~--~~-~~~~l----------- 183 (336)
+.+. .+++++++||||||||.+++++++++| +++++.+|+ ||+|.++. +. ...++
T Consensus 223 l~~~~~~~~~~~~~k~lvl~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DEiY~~~~~~~~~~~~s~~~~~~~~~~~~ 302 (498)
T 3ihj_A 223 LRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEY 302 (498)
T ss_dssp HHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHCCHH
T ss_conf 98788876504782599977995864543228999999763015479999731563441078877775777544413000
Q ss_pred HHCCCHHHHHHHHHHH-CCCCCCCEEECC---CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH--------HHHHH----
Q ss_conf 3245200120234652-334345313117---8899999973378778777789999999745--------99999----
Q T0636 184 AYGENELVFRSFSKSY-GLAGLRLGALFG---PSELIAAMKRKQWFCNVGTLDLHALEAALDN--------DRARE---- 247 (336)
Q Consensus 184 ~~~~n~iv~~S~SK~~-gl~GlRiG~~i~---~~~~i~~l~~~~~~~~~~~~~~~aa~~~l~~--------~~~~~---- 247 (336)
....++++++||||.| |++|+|+||++. ..+.+..+.+.......+...+.++..++.. .+.+.
T Consensus 303 ~~~~~vi~~~S~SK~~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 382 (498)
T 3ihj_A 303 SSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKE 382 (498)
T ss_dssp HTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 25634652245542334577561102331211289999999741444566389999999986566768999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHC-CCEEECCCC-CEEEEECCC---------------HHHHHH-HHHHCCCEEEECCCCCC-
Q ss_conf 99999999999999999858-978616986-478865698---------------899999-99876938960778888-
Q T0636 248 AHIAKTLAQRRRVADALRGL-GYRVASSEA-NFVLVENAA---------------GERTLR-FLRERGIQVKDAGQFGL- 308 (336)
Q Consensus 248 ~~~~~~~~~r~~l~~~l~~l-g~~~~~s~~-~Fi~~~~~~---------------~~~~~~-~L~~~gi~vr~~~~fg~- 308 (336)
..+..+.+.|+.+.+.|.++ |+++.+++| .|+|++++. +...+. .|.++||+|.||+.||.
T Consensus 383 ~i~~~l~~r~~~~~~~l~~i~g~~~~~p~Ga~y~~~~l~~~~~~~~~~~~~~~~~d~~f~~~LL~~~gV~v~PGs~Fg~~ 462 (498)
T 3ihj_A 383 SVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQR 462 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCEEEECCHHHCCC
T ss_conf 87799999999999999748996862788168998966776441124442257877999999998699999740230999
Q ss_pred --CCEEEEEECCH-HHHHHHHHHHHHHH
Q ss_conf --87478874798-99999999999998
Q T0636 309 --HHHIRISIGRE-EDNDRLLAALAEYS 333 (336)
Q Consensus 309 --~~~iRis~~~~-ee~~~l~~aL~~~~ 333 (336)
++|+|||++.+ |+++..++.|++|.
T Consensus 463 ~g~~~~Ris~~~~~e~l~eal~Ri~~f~ 490 (498)
T 3ihj_A 463 EGTYHFRMTILPPVEKLKTVLQKVKDFH 490 (498)
T ss_dssp TTCCBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 9998699997489999999999999999
No 48
>1vp4_A Aminotransferase, putative; TM1131, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima MSB8} SCOP: c.67.1.1
Probab=100.00 E-value=0 Score=334.21 Aligned_cols=321 Identities=18% Similarity=0.222 Sum_probs=241.5
Q ss_pred CCCCCCEECCCCCC-C-CCCCHHHHHHHHHHHH----HHHCCCCC-CHHHHHHHHHHHH----C---CCHHHEEEECCHH
Q ss_conf 36655357357654-8-8876899999999987----50058898-6189999999984----8---8854388607788
Q T0636 12 RAAAQAVCLAFNEN-P-EAVEPRVQAAIAAAAA----RINRYPFD-AEPRVMRKLAEHF----S---CPEDNLMLVRGID 77 (336)
Q Consensus 12 ~~~~~~i~L~~Nen-p-~~p~~~v~~al~~~~~----~~~~Ypd~-~~~~Lr~aia~~~----~---v~~d~I~~t~Gs~ 77 (336)
...+++|+|+.++. | +.|++.+.+++.+++. +..+|+++ |.++||++||+++ | +++++|++|+|++
T Consensus 40 ~~~~~~I~l~~G~Pd~~~~P~~~l~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~it~G~~ 119 (425)
T 1vp4_A 40 AADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQ 119 (425)
T ss_dssp TTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHH
T ss_pred HCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHH
T ss_conf 57999788998588965389899999999998538743468899867799999999999998499999931599915414
Q ss_pred HHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHH-------H---CCH-HHHHHHCCC
Q ss_conf 9999999984--69925763887356999999818803641554356778899973-------0---002-431330366
Q T0636 78 ECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQ-------V---SRD-DCVVLANPS 144 (336)
Q Consensus 78 ~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~-------~---~~~-~~i~l~nPn 144 (336)
+++.+++.++ +||.|++++|+|+.|...++..|.+++.+|.+++ ..+++.+.. . .+. .+++++|||
T Consensus 120 ~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 198 (425)
T 1vp4_A 120 QALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFH 198 (425)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 6677777653113442333344443201345432011223345432-233102333234566776415764577606899
Q ss_pred CCCCCCCCHHHHHH---HHHHCCCCC-CCCCCCCCC--CCCCCH---HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHH
Q ss_conf 33222223799999---997378720-252100258--866200---332452001202346523343453131178899
Q T0636 145 NPTGQALSAGELDQ---LRQRAGKLL-IDETYVDYS--SFRARG---LAYGENELVFRSFSKSYGLAGLRLGALFGPSEL 215 (336)
Q Consensus 145 NPTG~~~~~~~l~~---l~~~~~~~I-vDeaY~~f~--~~~~~~---l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~ 215 (336)
||||.+++.+++.+ ++++++.+| +||+|.+|. +....+ ....+++|+++|+||.++ ||+|+||+++++++
T Consensus 199 NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~RiG~~~~~~~~ 277 (425)
T 1vp4_A 199 NPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEF 277 (425)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHH
T ss_pred CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCC-CCCCCCCCCCCCHH
T ss_conf 87505774003556555433024443334210200012345565322245653138840365556-64553323455303
Q ss_pred HHHHHHCCCC--CCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHC-----CCEEECCC-CCEEEEECC
Q ss_conf 9999733787--787777899999997459---999999999999999999999858-----97861698-647886569
Q T0636 216 IAAMKRKQWF--CNVGTLDLHALEAALDND---RAREAHIAKTLAQRRRVADALRGL-----GYRVASSE-ANFVLVENA 284 (336)
Q Consensus 216 i~~l~~~~~~--~~~~~~~~~aa~~~l~~~---~~~~~~~~~~~~~r~~l~~~l~~l-----g~~~~~s~-~~Fi~~~~~ 284 (336)
++.+.+.... ++.+.+.|.++..++.+. +++.+.+..+++.++.+.+.|.+. |+++.+++ |.|+|++++
T Consensus 278 i~~l~~~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~p~gg~f~~~~~p 357 (425)
T 1vp4_A 278 IRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLP 357 (425)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECC
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEECC
T ss_conf 22334332310246770456777776224542145667899988888887777765412478836617994479999899
Q ss_pred ---CHHHHHHHHHHCCCEEEECCCCCC----CCEEEEEEC--CHHHHH----HHHHHHHHHHH
Q ss_conf ---889999999876938960778888----874788747--989999----99999999984
Q T0636 285 ---AGERTLRFLRERGIQVKDAGQFGL----HHHIRISIG--REEDND----RLLAALAEYSD 334 (336)
Q Consensus 285 ---~~~~~~~~L~~~gi~vr~~~~fg~----~~~iRis~~--~~ee~~----~l~~aL~~~~e 334 (336)
++..+++.|.++||.++||+.|+. .+|+|+|++ +.|+++ +|.++++||..
T Consensus 358 ~~~d~~~~~~~l~~~gV~v~PG~~F~~~~~~~~~iRls~~~~~~e~l~~a~~rl~~~l~e~~k 420 (425)
T 1vp4_A 358 EGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK 420 (425)
T ss_dssp TTCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999979969981145288999899899995849999999999999999998517
No 49
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, alternative splicing, mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 2vgz_A*
Probab=100.00 E-value=0 Score=330.12 Aligned_cols=328 Identities=18% Similarity=0.213 Sum_probs=239.5
Q ss_pred HHHHHHHCCCCCCEECCCCC-CC--CCCCHHHHHH---------HHHHHHHHHCCCCC-CHHHHHHHHHHHH--------
Q ss_conf 57897503665535735765-48--8876899999---------99998750058898-6189999999984--------
Q T0636 5 EAMDTEVRAAAQAVCLAFNE-NP--EAVEPRVQAA---------IAAAAARINRYPFD-AEPRVMRKLAEHF-------- 63 (336)
Q Consensus 5 ~~~~~~~~~~~~~i~L~~Ne-np--~~p~~~v~~a---------l~~~~~~~~~Ypd~-~~~~Lr~aia~~~-------- 63 (336)
+..+...+.++++|+|+.++ +| +|. +....+ ......+..+|++. |.++||++||+++
T Consensus 21 ~~~~~~~~~~~~~I~l~~G~P~p~~~P~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~ 99 (425)
T 2r2n_A 21 TMTDILSRGPKSMISLAGGLPNPNMFPF-KTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPT 99 (425)
T ss_dssp GHHHHHHHSCTTCEECCCCCCCGGGCSE-EEEEEEETTSCCEEECHHHHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHCCCCEEECCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 9999997189990889997889410787-999999997677665665214304889874609999999999999718887
Q ss_pred -----CCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH----
Q ss_conf -----888543886077889999999984--699257638873569999998188036415543567788999730----
Q T0636 64 -----SCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV---- 132 (336)
Q Consensus 64 -----~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~---- 132 (336)
++++++|++|+|++++|.++++++ +||.|++++|+|+.|...++..|.+++.+|++++ +.+++.++..
T Consensus 100 ~~~~~~~~~~~I~vt~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~vv~v~~~~~-g~~~~~l~~~~~~~ 178 (425)
T 2r2n_A 100 IHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDES-GIVPDSLRDILSRW 178 (425)
T ss_dssp TTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEECEETT-EECHHHHHHHHTTS
T ss_pred CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCC-CCCHHHHHHHHHCC
T ss_conf 45587898785999138899999999997299898998668773147899863974789851444-45667898876303
Q ss_pred ----------CCHHHHH-HHCCCCCCCCCCCHHHHHH---HHHHCCCCCC-CCCCCCCC--CCCCCH---HHHCCCHHHH
Q ss_conf ----------0024313-3036633222223799999---9973787202-52100258--866200---3324520012
Q T0636 133 ----------SRDDCVV-LANPSNPTGQALSAGELDQ---LRQRAGKLLI-DETYVDYS--SFRARG---LAYGENELVF 192 (336)
Q Consensus 133 ----------~~~~~i~-l~nPnNPTG~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~--~~~~~~---l~~~~n~iv~ 192 (336)
.+.++++ ++|||||||.+++.+++++ ++++++.+|| ||+|.+|. +..... +...+++|++
T Consensus 179 ~~~~~~~~~~~~~~~l~~~p~p~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~ 258 (425)
T 2r2n_A 179 KPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRA 258 (425)
T ss_dssp CSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEE
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCEEEE
T ss_conf 76788752238985999968999981715779999999999987345764477777751489999634421466534896
Q ss_pred HHHHHHHCCCCCCCEEECCCHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02346523343453131178899999973378--778777789999999745------9999999999999999999999
Q T0636 193 RSFSKSYGLAGLRLGALFGPSELIAAMKRKQW--FCNVGTLDLHALEAALDN------DRAREAHIAKTLAQRRRVADAL 264 (336)
Q Consensus 193 ~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~--~~~~~~~~~~aa~~~l~~------~~~~~~~~~~~~~~r~~l~~~l 264 (336)
+||||.++ +|+|+||+++++++++.+.+.+. ..+.+++.|.++.+++.. .+++++.+..++++|+.+.+.+
T Consensus 259 ~s~sk~~~-~GlRvG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 337 (425)
T 2r2n_A 259 DSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAA 337 (425)
T ss_dssp EESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC-CCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56556668-82315555321999999999998632578808999999999863343200225899999999999999999
Q ss_pred HHC--C-CEEE-CCCCCEEEEECC---CHHHH-HHHHHHCCCEEEECCCCCC-----CCEEEEEEC--CHHHHHHHHHHH
Q ss_conf 858--9-7861-698647886569---88999-9999876938960778888-----874788747--989999999999
Q T0636 265 RGL--G-YRVA-SSEANFVLVENA---AGERT-LRFLRERGIQVKDAGQFGL-----HHHIRISIG--REEDNDRLLAAL 329 (336)
Q Consensus 265 ~~l--g-~~~~-~s~~~Fi~~~~~---~~~~~-~~~L~~~gi~vr~~~~fg~-----~~~iRis~~--~~ee~~~l~~aL 329 (336)
++. + +.+. |.+|+|+|++++ ++.+. .+.|.++||.++||+.|+. ++|+|||++ +++++++.+++|
T Consensus 338 ~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~~~~~~~l~~~gV~v~PG~~F~~~~~~~~~~~Rls~a~~~~~~l~~a~~rL 417 (425)
T 2r2n_A 338 DKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVL 417 (425)
T ss_dssp HHHCSSSEEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHH
T ss_pred HHHCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
T ss_conf 97567984460799326999989999999999999999789999943552789888999899995869999999999999
Q ss_pred HHHHHC
Q ss_conf 999842
Q T0636 330 AEYSDH 335 (336)
Q Consensus 330 ~~~~e~ 335 (336)
++++++
T Consensus 418 ~~~l~e 423 (425)
T 2r2n_A 418 AQLIKE 423 (425)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999995
No 50
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=0 Score=337.25 Aligned_cols=314 Identities=13% Similarity=0.105 Sum_probs=232.7
Q ss_pred HHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH-----HHHCCCCCCH------HHHHHHHHHHHC------CCHHHEE
Q ss_conf 7503665535735765488876899999999987-----5005889861------899999999848------8854388
Q T0636 9 TEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAA-----RINRYPFDAE------PRVMRKLAEHFS------CPEDNLM 71 (336)
Q Consensus 9 ~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~-----~~~~Ypd~~~------~~Lr~aia~~~~------v~~d~I~ 71 (336)
+..+.+.++|+|+.+++.+.||...+++..+++. .+..|++.++ ++||++|+++++ +++++|+
T Consensus 16 k~~~~~d~vi~l~~G~P~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~el~~~i~~~~~~~~~~~~~~~~I~ 95 (391)
T 3bwn_A 16 KNIPMSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIV 95 (391)
T ss_dssp --CCTTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEE
T ss_pred CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf 78999987078999799999857899999999736365665657898875544679999999999987469889969799
Q ss_pred EECCHHHHHHHHHHHH--CCCCE----EECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHCCCC
Q ss_conf 6077889999999984--69925----76388735699999981880364155435677889997300024313303663
Q T0636 72 LVRGIDECFDRISAEF--SSMRF----VTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSN 145 (336)
Q Consensus 72 ~t~Gs~~~i~~~~~~~--~~~~v----ii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnN 145 (336)
+|+|++++|+++++++ +||.| +++.|+|+.|.......+.....+ ..|.++ ....+++++++|||||
T Consensus 96 vt~Ga~~~i~~~~~~l~~~gd~v~~~~~~~~p~y~~~~~~~~~~~~~~~~~------~~d~~~-~~~~~~k~i~l~~P~N 168 (391)
T 3bwn_A 96 VGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKW------EGDAWG-FDKKGPYIELVTSPNN 168 (391)
T ss_dssp EEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEE------EEESTT-CCCCSCEEEEEESSCT
T ss_pred ECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCC------CCCHHH-HCCCCCEEEEECCCCC
T ss_conf 898889999999999853899744104526540887776775144767573------828896-1778976999889989
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECC-CHHHHHHHHHCC
Q ss_conf 32222237999999973787202-5210025886620033245200120234652334345313117-889999997337
Q T0636 146 PTGQALSAGELDQLRQRAGKLLI-DETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRKQ 223 (336)
Q Consensus 146 PTG~~~~~~~l~~l~~~~~~~Iv-DeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~-~~~~i~~l~~~~ 223 (336)
|||.++ +++.+++++++.+|| ||+|.++.-... ....+|+|+++||||.||+||+|+||+++ ++.+.+.+.+..
T Consensus 169 PTG~~~--~~i~~~a~~~~~~vi~De~y~~~~~~~~--~~~~~~~I~i~S~SK~~~l~GlRiG~~v~~~~~l~~~~~~~~ 244 (391)
T 3bwn_A 169 PDGTIR--ETVVNRPDDDEAKVIHDFAYYWPHYTPI--TRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYI 244 (391)
T ss_dssp TTCCCC--CCCC-----CCCEEEEECTTCSTTTSCC--CCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHH
T ss_pred CCCHHH--HHHHHHHHHCCCEEEECCCEECCCHHHC--CCCCCCEEEEECCCHHCCCCCCCEEEEEECHHHHHHHHHHHC
T ss_conf 986589--9999986741967995582422301002--346688899945830101744057999978299999999843
Q ss_pred --CCCCCCHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHCCCE---------------EECCC
Q ss_conf --8778777789999999745-----------9999999999999999999999858978---------------61698
Q T0636 224 --WFCNVGTLDLHALEAALDN-----------DRAREAHIAKTLAQRRRVADALRGLGYR---------------VASSE 275 (336)
Q Consensus 224 --~~~~~~~~~~~aa~~~l~~-----------~~~~~~~~~~~~~~r~~l~~~l~~lg~~---------------~~~s~ 275 (336)
...+++.++|.++.+++.. .++++..++.+.++|+++.+.|++.+.. ..++.
T Consensus 245 ~~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (391)
T 3bwn_A 245 IVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESY 324 (391)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEECCCC
T ss_conf 20567758999999999988689998766657999999999999999999999987699311355886058987524886
Q ss_pred CCEEEEECCCHHHHHHHHHHCCCEEEECCCCCC-CCEEEEEECC-HHHHHHHHHHHHHHH
Q ss_conf 647886569889999999876938960778888-8747887479-899999999999998
Q T0636 276 ANFVLVENAAGERTLRFLRERGIQVKDAGQFGL-HHHIRISIGR-EEDNDRLLAALAEYS 333 (336)
Q Consensus 276 ~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~-~~~iRis~~~-~ee~~~l~~aL~~~~ 333 (336)
++|.|++..+..++.+.|.++||.|+||+.||. ++|+|||+++ +|+++.++++|++++
T Consensus 325 ~~f~~~~~~~~~~~~~~L~~~gV~v~pG~~Fg~~~~~vRis~~~~~e~l~~~l~rL~~l~ 384 (391)
T 3bwn_A 325 PAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFNVFLERLANMK 384 (391)
T ss_dssp CSEEEEEESSSCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHHHHHHHHHSCC
T ss_pred CCHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 420004789899999999859999983400399969899997088999999999999977
No 51
>3f6t_A Aspartate aminotransferase; YP_194538.1, structural genomics, joint center for structural genomics, JCSG; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=0 Score=328.09 Aligned_cols=312 Identities=17% Similarity=0.251 Sum_probs=216.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHH-----------------HHCCCCC-CHHHHHHHHHHHH-------C---CCHHHEEEEC
Q ss_conf 654888768999999999875-----------------0058898-6189999999984-------8---8854388607
Q T0636 23 NENPEAVEPRVQAAIAAAAAR-----------------INRYPFD-AEPRVMRKLAEHF-------S---CPEDNLMLVR 74 (336)
Q Consensus 23 Nenp~~p~~~v~~al~~~~~~-----------------~~~Ypd~-~~~~Lr~aia~~~-------~---v~~d~I~~t~ 74 (336)
++|+.+|.+.+.+++.....+ -..||+| +...++|+|+++| + .++++|++|+
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~g~~YP~P~r~l~~~E~i~~~~l~~~~~~~~~~~~~~~i~~t~ 171 (533)
T 3f6t_A 92 DPDKNDEDKFLIDAVNYCHTELGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTE 171 (533)
T ss_dssp CTTTCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEE
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
T ss_conf 74877777799999999999868997889999997422688989446578899999999998612489999827499938
Q ss_pred CHHHHHHHHHHHH-------CCCCEEECCCCCHHHHHHHHHHCCCEEEECC----CCCCCCCHHHHHHH--CCHHHHHHH
Q ss_conf 7889999999984-------6992576388735699999981880364155----43567788999730--002431330
Q T0636 75 GIDECFDRISAEF-------SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL----TDDLLLDPNDLAQV--SRDDCVVLA 141 (336)
Q Consensus 75 Gs~~~i~~~~~~~-------~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~----~~~~~~d~~~l~~~--~~~~~i~l~ 141 (336)
|++++|..+++++ +||+|++++|+|+.|...+++.|.+++.+++ +++|++|++++++. .++|++++|
T Consensus 172 Ga~~ai~~~~~aL~~~~ll~pGD~Vli~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~~~d~~~L~~~~~~~~k~i~i~ 251 (533)
T 3f6t_A 172 GGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVV 251 (533)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEE
T ss_conf 88999999999988613679999579959987779999998699899972567755574789999997389998189981
Q ss_pred CCCCCCCCCCCHHHHHHH---HHHC-CCCCC-CCCCCCCCCCCCCH-HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHH
Q ss_conf 366332222237999999---9737-87202-52100258866200-332452001202346523343453131178899
Q T0636 142 NPSNPTGQALSAGELDQL---RQRA-GKLLI-DETYVDYSSFRARG-LAYGENELVFRSFSKSYGLAGLRLGALFGPSEL 215 (336)
Q Consensus 142 nPnNPTG~~~~~~~l~~l---~~~~-~~~Iv-DeaY~~f~~~~~~~-l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~ 215 (336)
|||||||.+++.+++.+| ++++ +++|| ||+|.+|....... ....+|+|+++||||.||+||||+||++++++.
T Consensus 252 nP~NPTG~~~s~e~l~~i~~~~~~~~~l~II~DevY~~~~~~~~s~~~~~~~~~i~v~SfSK~f~~~G~RlG~i~~~~~~ 331 (533)
T 3f6t_A 252 NPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEKN 331 (533)
T ss_dssp SSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHH
T ss_conf 89698899989999999999999779955953777641122467631133300111355554456621115754268899
Q ss_pred H-HHHH------------H------------------------C--CCCCCCCHHHHHHH-H----HHHH------HHHH
Q ss_conf 9-9997------------3------------------------3--78778777789999-9----9974------5999
Q T0636 216 I-AAMK------------R------------------------K--QWFCNVGTLDLHAL-E----AALD------NDRA 245 (336)
Q Consensus 216 i-~~l~------------~------------------------~--~~~~~~~~~~~~aa-~----~~l~------~~~~ 245 (336)
+ +.+. + . ...-+++++.|... . ..+. ...+
T Consensus 332 i~~~~~~~l~~~~~~~~~~~y~~~~~~P~~~~~idrlvadsr~~~l~htagls~pqqv~~al~~~~~~l~~~~~~~~~~y 411 (533)
T 3f6t_A 332 VFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPY 411 (533)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99999986427888899999988727833699999987666777887764026717899999999999998733430689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECC-------------------CHHHH-HHHHHHCCCEEEECCC
Q ss_conf 999999999999999999985897861698647886569-------------------88999-9999876938960778
Q T0636 246 REAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENA-------------------AGERT-LRFLRERGIQVKDAGQ 305 (336)
Q Consensus 246 ~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~-------------------~~~~~-~~~L~~~gi~vr~~~~ 305 (336)
++..++.++++++.|.+.|...+....|..+.|+|+++. ++.++ .+.+.++||.+.||+.
T Consensus 412 ~~~~r~~~~~R~~~L~~~L~~~~~~~~p~g~fY~~~dl~~~~~~~~g~~f~~~l~~~~~~~d~~~~Llee~gV~v~PG~~ 491 (533)
T 3f6t_A 412 IDIARKLVSERYDQLHDAMQAPKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVG 491 (533)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCEEEECCHH
T ss_conf 99999999999999999852667776898016998740663100245114421578999999999999868999978433
Q ss_pred CCC-CCEEEEEEC--CHHHH----HHHHHHHHHHHH
Q ss_conf 888-874788747--98999----999999999984
Q T0636 306 FGL-HHHIRISIG--REEDN----DRLLAALAEYSD 334 (336)
Q Consensus 306 fg~-~~~iRis~~--~~ee~----~~l~~aL~~~~e 334 (336)
||. ++|+|+|++ ++++. +++.+.|++|.+
T Consensus 492 Fg~~~g~iRiS~A~l~eed~~~i~~~i~~~l~e~~~ 527 (533)
T 3f6t_A 492 FGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp ECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 489989799994459999999999999999999999
No 52
>3ez1_A Aminotransferase MOCR family; YP_604413.1, structural genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=0 Score=323.64 Aligned_cols=325 Identities=15% Similarity=0.206 Sum_probs=226.0
Q ss_pred HHHHHHHCCCCCCEECCCCCCC---CCCCHHHHHHHHHH-----HHHHHCC--CCCCHHHHHHHHHHHHCCCHHHEEEEC
Q ss_conf 5789750366553573576548---88768999999999-----8750058--898618999999998488854388607
Q T0636 5 EAMDTEVRAAAQAVCLAFNENP---EAVEPRVQAAIAAA-----AARINRY--PFDAEPRVMRKLAEHFSCPEDNLMLVR 74 (336)
Q Consensus 5 ~~~~~~~~~~~~~i~L~~Nenp---~~p~~~v~~al~~~-----~~~~~~Y--pd~~~~~Lr~aia~~~~v~~d~I~~t~ 74 (336)
.+|++...++-+ |+|+.+++. +..+..+.+.+... -.++++| +..|.++||+++|+++++++|+|++|+
T Consensus 16 ~~~~~lk~~~~~-idls~G~P~~~~ld~~~~~~~~~~~~~~~~~~~d~~~y~g~~~G~pelR~~iA~~l~~~~~~i~v~~ 94 (423)
T 3ez1_A 16 QAYEAFKARGLN-LNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWN 94 (423)
T ss_dssp HHHHHHHHHTCC-EESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECS
T ss_pred HHHHHHHHCCCC-CCCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCHHCCCCCCCCCCHHHHHHHHHHHCCCHHHEEEEC
T ss_conf 999999975997-3677778991002776355606563211212622204889988709999999998687966799828
Q ss_pred CHHHHHHHHHHHH---------------CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHC-----C
Q ss_conf 7889999999984---------------6992576388735699999981880364155435677889997300-----0
Q T0636 75 GIDECFDRISAEF---------------SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVS-----R 134 (336)
Q Consensus 75 Gs~~~i~~~~~~~---------------~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~-----~ 134 (336)
|+++++..++.++ +||+|+++.|+|+.|...++.+|++++.+|++++ +.|++.+++.. +
T Consensus 95 gas~~l~~~~~~~~~~~g~~~~~~~~~~~Gd~vl~p~P~y~~~~~~~~~~G~~~~~vp~~~~-g~d~~~le~l~~~~~~~ 173 (423)
T 3ez1_A 95 NSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-GPDVDAVERLAGTDPSV 173 (423)
T ss_dssp SCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHHSCTTE
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCC-CCCHHHHHHHHHCCCCC
T ss_conf 94599999999999854545566444799998999799838999999986998999613799-99999999997279998
Q ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHH----HCCCCCC-CCCCCC--CCCCC---CCH---HH----HCCCHHHHHHHHH
Q ss_conf 243133036633222223799999997----3787202-521002--58866---200---33----2452001202346
Q T0636 135 DDCVVLANPSNPTGQALSAGELDQLRQ----RAGKLLI-DETYVD--YSSFR---ARG---LA----YGENELVFRSFSK 197 (336)
Q Consensus 135 ~~~i~l~nPnNPTG~~~~~~~l~~l~~----~~~~~Iv-DeaY~~--f~~~~---~~~---l~----~~~n~iv~~S~SK 197 (336)
+++++++|||||||.+++.+++.+|++ +++.+|+ ||+|.+ |.... +.. +. ...+++++.|+||
T Consensus 174 ~~~~~~~~p~NPTG~v~s~e~l~~l~~l~a~~~~~~Ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK 253 (423)
T 3ez1_A 174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK 253 (423)
T ss_dssp EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 29999598969728128999999999999862865899985015541477788881566665301699875999825644
Q ss_pred HHCCCCCCCEEECCCHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH----HHHHHHHHH
Q ss_conf 523343453131178899999973378--778777789999999745-----999999999999999----999999985
Q T0636 198 SYGLAGLRLGALFGPSELIAAMKRKQW--FCNVGTLDLHALEAALDN-----DRAREAHIAKTLAQR----RRVADALRG 266 (336)
Q Consensus 198 ~~gl~GlRiG~~i~~~~~i~~l~~~~~--~~~~~~~~~~aa~~~l~~-----~~~~~~~~~~~~~~r----~~l~~~l~~ 266 (336)
.+ +||+|+||+++++++++.+.+.+. .++.+.++|.++..++.+ ..++++.++.++..+ +.+.+.+.+
T Consensus 254 ~~-~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 332 (423)
T 3ez1_A 254 IT-FAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGE 332 (423)
T ss_dssp TS-CSSSSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 45-64001004250699999999997550258986999999999981333369999999999999999999999999875
Q ss_pred CC--CEEE-CCCCCEEEEECC--CHHHHHHHHHHCCCEEEECCCCC------CCCEEEEEEC--CHHHHHHHHHHHHHH
Q ss_conf 89--7861-698647886569--88999999987693896077888------8874788747--989999999999999
Q T0636 267 LG--YRVA-SSEANFVLVENA--AGERTLRFLRERGIQVKDAGQFG------LHHHIRISIG--REEDNDRLLAALAEY 332 (336)
Q Consensus 267 lg--~~~~-~s~~~Fi~~~~~--~~~~~~~~L~~~gi~vr~~~~fg------~~~~iRis~~--~~ee~~~l~~aL~~~ 332 (336)
.+ +.+. |..|.|+|++.+ .++.+.+.+.++||.+.||+.|. .++|+|+|++ ++|++++.++.|++.
T Consensus 333 ~~~~~~~~~P~gg~f~w~~~~~~~~~~~~~~l~~~gV~v~PG~~F~~~g~~~~~~~iRls~a~~~~e~l~eai~rL~~~ 411 (423)
T 3ez1_A 333 GGEYATWTLPKGGYFISLDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAAC 411 (423)
T ss_dssp TTSSEEECCCSBSSCEEEEESSSCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 5886057369812699997697679999999997895999652305788788899899984889999999999999999
No 53
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=0 Score=326.53 Aligned_cols=310 Identities=12% Similarity=0.108 Sum_probs=224.3
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHHHH--HH--HHCCC-CC----CHHHHHHHHHHHHCC------CHHHEEEECCH
Q ss_conf 366553573576548887689999999998--75--00588-98----618999999998488------85438860778
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAAAA--AR--INRYP-FD----AEPRVMRKLAEHFSC------PEDNLMLVRGI 76 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~~~--~~--~~~Yp-d~----~~~~Lr~aia~~~~v------~~d~I~~t~Gs 76 (336)
.-++-+++|+++++.+..|=..+.+-..+. .. -..|- ++ ..++|+++|++.|++ +..+|++|+|+
T Consensus 53 ~~~~~~~~~~~gdp~~~~~~~~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~I~~lh~~~gna~~d~~~IvvG~Gs 132 (427)
T 2hox_A 53 KIQGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGV 132 (427)
T ss_dssp ECTTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCH
T ss_conf 67875124788898766478884735312673044555410378766576899999999985106878889989989789
Q ss_pred HHHHHHHHHHH----------CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCC
Q ss_conf 89999999984----------699257638873569999998188036415543567788999730--002431330366
Q T0636 77 DECFDRISAEF----------SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPS 144 (336)
Q Consensus 77 ~~~i~~~~~~~----------~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPn 144 (336)
+|+|+++++++ +||+|+++.|+|+.|...+++.+..... |.+|.+.+.+. .++++++|||||
T Consensus 133 tqli~a~~~AL~~~~~~~~~~pgd~Vv~~~P~Y~~Y~~~~~~~~~~~~~------~~~d~~~~~~~~~~~~~ii~l~sPn 206 (427)
T 2hox_A 133 TQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVSNPEQYIEMVTSPN 206 (427)
T ss_dssp HHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSCGGGEEEEEESSC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCC------CCCCHHHHHHCCCCCCEEEEEECCC
T ss_conf 9999999998454123455799998999278716699999974997644------2699999985178996599997998
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEE-CCCHHHHHHHHHCC
Q ss_conf 33222223799999997378720252100258866200332452001202346523343453131-17889999997337
Q T0636 145 NPTGQALSAGELDQLRQRAGKLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGAL-FGPSELIAAMKRKQ 223 (336)
Q Consensus 145 NPTG~~~~~~~l~~l~~~~~~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~-i~~~~~i~~l~~~~ 223 (336)
||||++.. . +.....+|+||+|.+.. ........+|+|+++||||+||+||+|+||+ +.++++++.+.+..
T Consensus 207 NPTG~l~~--~----v~~~~~~I~DeaY~~~~--~~~i~~~~~~~Ivl~S~SK~fglaGlRlGwai~~~~~v~~~~~~~~ 278 (427)
T 2hox_A 207 NPEGLLRH--A----VIKGCKSIYDMVYYWPH--YTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYM 278 (427)
T ss_dssp TTTCCCCC--C----SSTTCEEEEECTTCSTT--TSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHH
T ss_pred CCHHHHHH--H----HHHCCEEEEECCCCCCC--CCCCCCCCCCEEEEEECHHHCCCCHHHEEEEEECCHHHHHHHHHHH
T ss_conf 94277578--7----87387899553231776--5763103688699975778613651332457848899999999861
Q ss_pred --CCCCCCHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHCCC----------------EEEC
Q ss_conf --877877778999999974599------------9999999999999999999985897----------------8616
Q T0636 224 --WFCNVGTLDLHALEAALDNDR------------AREAHIAKTLAQRRRVADALRGLGY----------------RVAS 273 (336)
Q Consensus 224 --~~~~~~~~~~~aa~~~l~~~~------------~~~~~~~~~~~~r~~l~~~l~~lg~----------------~~~~ 273 (336)
..+++|.++|.++.++|++.. +++..++.+.++++++.+.+.+.|. .+.+
T Consensus 279 ~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~l~~~~~f~l~~~p~~~~~~f~~~~~~ 358 (427)
T 2hox_A 279 TKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRP 358 (427)
T ss_dssp HHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCC
T ss_conf 22767767999999999985438999999999999999999999999999999986458611011687301144201358
Q ss_pred CCCCEEEEECC--CHHHHHHHHHHCCCEEEECCCCCC-CCEEEEEE-CCHHHHHHHHHHHHHHHHC
Q ss_conf 98647886569--889999999876938960778888-87478874-7989999999999999842
Q T0636 274 SEANFVLVENA--AGERTLRFLRERGIQVKDAGQFGL-HHHIRISI-GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 274 s~~~Fi~~~~~--~~~~~~~~L~~~gi~vr~~~~fg~-~~~iRis~-~~~ee~~~l~~aL~~~~e~ 335 (336)
++++|+|++.. +.+.+.+.|+++||.++||+.||. ++|+|||+ +++|++++++++|+++++.
T Consensus 359 ~~~~f~wlk~~~~~~~~~~~lL~e~gI~v~pG~~FG~~~~~vRisl~~~~e~l~~al~rL~~~v~~ 424 (427)
T 2hox_A 359 PSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp CCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCEEEEECHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 875435543699869999999986999999521018996979999569899999999999999997
No 54
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=0 Score=322.58 Aligned_cols=287 Identities=18% Similarity=0.270 Sum_probs=199.7
Q ss_pred HCCCCC-CHHHHHHHHHHHH--------CC--CHHHEEEECCHHHHHHHHHHHH-------CCCCEEECCCCCHHHHHHH
Q ss_conf 058898-6189999999984--------88--8543886077889999999984-------6992576388735699999
Q T0636 45 NRYPFD-AEPRVMRKLAEHF--------SC--PEDNLMLVRGIDECFDRISAEF-------SSMRFVTAWPGFDGYRARI 106 (336)
Q Consensus 45 ~~Ypd~-~~~~Lr~aia~~~--------~v--~~d~I~~t~Gs~~~i~~~~~~~-------~~~~vii~~P~y~~y~~~~ 106 (336)
.+||.+ +...+|++|++.| +. ++++|++|+|++++|..+++++ +||.|++++|+|+.|...+
T Consensus 132 ~~Yp~p~~~l~~~e~i~~~yl~~~~~~~~~p~~~~~i~~T~Gat~Al~~if~~l~~~~ll~pGD~Vli~~P~y~~y~~~~ 211 (546)
T 2zy4_A 132 CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP 211 (546)
T ss_dssp CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH
T ss_conf 88979986479999999999999717688989968599907879999999999988307298998998389848799999
Q ss_pred HHHCCCEEEECCC----CCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHH---HHHC--CCCCC-CCCCCC
Q ss_conf 9818803641554----3567788999730--002431330366332222237999999---9737--87202-521002
Q T0636 107 AVSGLRHFEIGLT----DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQL---RQRA--GKLLI-DETYVD 174 (336)
Q Consensus 107 ~~~g~~~~~vp~~----~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l---~~~~--~~~Iv-DeaY~~ 174 (336)
++.|..+..+++. .+|++|.+++++. .+++++++||||||||.+++.+++.+| ++++ +++|| ||+|.+
T Consensus 212 ~l~g~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~k~lil~nP~NPTG~~~s~~~l~~i~~i~~~~~~~l~II~DEvY~~ 291 (546)
T 2zy4_A 212 ELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGT 291 (546)
T ss_dssp HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGG
T ss_pred HHCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 98198479998416855588999999997289998689982897960434899999999987752289879997886544
Q ss_pred CCCCCCCHH-HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHH--H------------------------------
Q ss_conf 588662003-3245200120234652334345313117889999997--3------------------------------
Q T0636 175 YSSFRARGL-AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMK--R------------------------------ 221 (336)
Q Consensus 175 f~~~~~~~l-~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~--~------------------------------ 221 (336)
|........ ...+|+|+++||||+||+||||+||++++++++.... +
T Consensus 292 ~~~~~~s~~~~~~~~~I~v~S~SK~f~~~G~RlG~i~~~~~~I~~~~~~~l~~~~~~~l~~~y~~l~~~~~~~~fi~rlv 371 (546)
T 2zy4_A 292 FADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLV 371 (546)
T ss_dssp GSTTCCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHH
T ss_pred CCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 56788764341766779942361203785601699997689999999997153212017889988604520389999999
Q ss_pred --CC-----CCCCCCHHHHHH--H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE---CCCCCEEEEECCC-
Q ss_conf --37-----877877778999--9---999745999999999999999999999985897861---6986478865698-
Q T0636 222 --KQ-----WFCNVGTLDLHA--L---EAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVA---SSEANFVLVENAA- 285 (336)
Q Consensus 222 --~~-----~~~~~~~~~~~a--a---~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~---~s~~~Fi~~~~~~- 285 (336)
.+ ..-+++++.|.. . .+.++..+++.+.++.+.++|+.+. .+.+|+.+. +..+.|+|++++.
T Consensus 372 ad~r~~aln~~aglstP~q~q~a~~~~~al~d~~~~y~~~~k~~~~rR~~~l--~~~lg~~~~~~~~~~~fY~~~dl~~~ 449 (546)
T 2zy4_A 372 ADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTL--YRELGMPPLRDENAVDYYTLIDLQDV 449 (546)
T ss_dssp HHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH--HGGGTSSCCCCTTBCCSEEEEEHHHH
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCCCCCCEEEEEEEECCCC
T ss_conf 9888888761030368089999999999862217999999999999999999--98579986012898148999875000
Q ss_pred ------------------HHH-HHHHHHHCCCEEEECCCCCCC-CEEEEEEC--CHHHHHHHHHHHHHHH
Q ss_conf ------------------899-999998769389607788888-74788747--9899999999999998
Q T0636 286 ------------------GER-TLRFLRERGIQVKDAGQFGLH-HHIRISIG--REEDNDRLLAALAEYS 333 (336)
Q Consensus 286 ------------------~~~-~~~~L~~~gi~vr~~~~fg~~-~~iRis~~--~~ee~~~l~~aL~~~~ 333 (336)
+.+ +.+.+.++||.+.||+.||.+ +++|+|++ ++++.+++.++++++.
T Consensus 450 ~~~~~g~~f~~~l~~~~~~~~~~~~Llee~GV~vvPG~~FG~~~~~vRiS~Anl~e~~~~~I~~~ir~~~ 519 (546)
T 2zy4_A 450 TAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMA 519 (546)
T ss_dssp HHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 3444517788762258998999999998489999777445889897999948799789999999999999
No 55
>3d6k_A Putative aminotransferase; APC82464, structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=0 Score=316.91 Aligned_cols=328 Identities=16% Similarity=0.132 Sum_probs=230.7
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCC---CCCCHHHHHHHHHH-----HHHHHCCCCC-CHHHHHHHHHHHHCCCHHHEEEE
Q ss_conf 115789750366553573576548---88768999999999-----8750058898-61899999999848885438860
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENP---EAVEPRVQAAIAAA-----AARINRYPFD-AEPRVMRKLAEHFSCPEDNLMLV 73 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp---~~p~~~v~~al~~~-----~~~~~~Ypd~-~~~~Lr~aia~~~~v~~d~I~~t 73 (336)
|..+|++....+ ..|+|+.+++. ++.+.....+.... ..++++|+++ |.++||++||+++++++|+|++|
T Consensus 21 ~~~~~~~l~~~~-~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~iA~~l~~~~~~I~it 99 (422)
T 3d6k_A 21 VTAKYAELKAKN-LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQ 99 (422)
T ss_dssp HHHHHHHHHHTT-CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGGGEEEC
T ss_pred HHHHHHHHHHCC-CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCHHHEEEC
T ss_conf 999999998679-9576788799975579983588764467765249432079980303999999998878284769982
Q ss_pred CCHHHHHH--HHHHH--------------HCCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCC--H
Q ss_conf 77889999--99998--------------469925763887356999999818803641554356778899973000--2
Q T0636 74 RGIDECFD--RISAE--------------FSSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSR--D 135 (336)
Q Consensus 74 ~Gs~~~i~--~~~~~--------------~~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~--~ 135 (336)
+|+++++. ++.++ .+||+|++++|+|+.|...++..|.+++.+|++++ ++|++++++..+ +
T Consensus 100 ~Gs~~~l~~~l~~~~~~~~~~~~~~~~~~~pgd~Vlv~~P~Y~~~~~~~~~~G~~~~~vp~d~~-g~d~~~le~~~~~~~ 178 (422)
T 3d6k_A 100 DGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQ 178 (422)
T ss_dssp SSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHTSTT
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCC-CCCHHHHHHHHHCCC
T ss_conf 7879999999999997413443333233799998998389838999999986998999844788-789799999730589
Q ss_pred HHHHHHCC--CCCCCCCCCHHHHHHHHH---HC-CCCCC-CCCCCCCC--CCCCC------H---HHHCCCHHHHHHHHH
Q ss_conf 43133036--633222223799999997---37-87202-52100258--86620------0---332452001202346
Q T0636 136 DCVVLANP--SNPTGQALSAGELDQLRQ---RA-GKLLI-DETYVDYS--SFRAR------G---LAYGENELVFRSFSK 197 (336)
Q Consensus 136 ~~i~l~nP--nNPTG~~~~~~~l~~l~~---~~-~~~Iv-DeaY~~f~--~~~~~------~---l~~~~n~iv~~S~SK 197 (336)
+.+++||| |||||.+++.+++.++++ ++ +.+|+ ||+|.+|. +.... . ....+++|+++||||
T Consensus 179 ~~~i~~~P~~~NPTG~v~s~~~~~~i~~~a~~~~~i~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 258 (422)
T 3d6k_A 179 VKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSK 258 (422)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTT
T ss_pred CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 76999859999999771899999999998765598579963240254226667751445459872799880899824411
Q ss_pred HHCCCCCCCEEECCCHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHC
Q ss_conf 523343453131178899999973378--7787777899999997459999----999999999999999----999858
Q T0636 198 SYGLAGLRLGALFGPSELIAAMKRKQW--FCNVGTLDLHALEAALDNDRAR----EAHIAKTLAQRRRVA----DALRGL 267 (336)
Q Consensus 198 ~~gl~GlRiG~~i~~~~~i~~l~~~~~--~~~~~~~~~~aa~~~l~~~~~~----~~~~~~~~~~r~~l~----~~l~~l 267 (336)
.|+ ||+|+||+++++++++.+.+.+. .++.+.++|.++..++.+...+ ++.++.++++++++. +.|.+.
T Consensus 259 ~~~-~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 337 (422)
T 3d6k_A 259 ITH-AGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEY 337 (422)
T ss_dssp TSC-TTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCC-CHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 047-3021302248999999999998635778985999999999975411799999999999999999999999854005
Q ss_pred CC-EEE-CCCCCEEEEECC--CHHHHHHHHHHCCCEEE-ECCCCC-----CCCEEEEEEC--CHHHHHHHHHHHHHHH
Q ss_conf 97-861-698647886569--88999999987693896-077888-----8874788747--9899999999999998
Q T0636 268 GY-RVA-SSEANFVLVENA--AGERTLRFLRERGIQVK-DAGQFG-----LHHHIRISIG--REEDNDRLLAALAEYS 333 (336)
Q Consensus 268 g~-~~~-~s~~~Fi~~~~~--~~~~~~~~L~~~gi~vr-~~~~fg-----~~~~iRis~~--~~ee~~~l~~aL~~~~ 333 (336)
+. ++. |..|.|+|++++ .+.++++.|.++||.+. ++..|+ .++|||+|++ ++|++++.++.|....
T Consensus 338 ~~~~~~~P~gg~fl~~~l~~~~~~~~~~~l~~~gv~~v~~g~~f~~~~~~~~~~iRlsf~~~~~e~l~~a~~~la~~v 415 (422)
T 3d6k_A 338 GVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCV 415 (422)
T ss_dssp TCEEECCCSBSSCEEEEESTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHH
T ss_pred CCCEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 871442788205999988998599999999985988985853135898889998999848899999999999999999
No 56
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=0 Score=315.68 Aligned_cols=322 Identities=16% Similarity=0.160 Sum_probs=223.3
Q ss_pred CCCCCEECCCCCCC-CCCCH-HHHHHHHHHHH------HHHCCCCC-CHHHHHHHHHHHH------CCCHHHEEEECCHH
Q ss_conf 66553573576548-88768-99999999987------50058898-6189999999984------88854388607788
Q T0636 13 AAAQAVCLAFNENP-EAVEP-RVQAAIAAAAA------RINRYPFD-AEPRVMRKLAEHF------SCPEDNLMLVRGID 77 (336)
Q Consensus 13 ~~~~~i~L~~Nenp-~~p~~-~v~~al~~~~~------~~~~Ypd~-~~~~Lr~aia~~~------~v~~d~I~~t~Gs~ 77 (336)
..+++|+|+.+.+. +|+++ .+.+++.+.+. .+.+|+++ |.++||+++|+++ ++++|+|++|+|++
T Consensus 29 ~~p~~I~l~~G~P~~~p~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~ 108 (417)
T 3g7q_A 29 RTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQ 108 (417)
T ss_dssp ---CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHH
T ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEECCCHH
T ss_conf 89990899998899988758999999999986685566644989986729999999999998709998820099928889
Q ss_pred HHHHHHHHHHC-----CCCEEECCCCCHHHHHHHHHHCCCEE------EEC--CCCCCCCCHHHHH--HHCCHHHHHHHC
Q ss_conf 99999999846-----99257638873569999998188036------415--5435677889997--300024313303
Q T0636 78 ECFDRISAEFS-----SMRFVTAWPGFDGYRARIAVSGLRHF------EIG--LTDDLLLDPNDLA--QVSRDDCVVLAN 142 (336)
Q Consensus 78 ~~i~~~~~~~~-----~~~vii~~P~y~~y~~~~~~~g~~~~------~vp--~~~~~~~d~~~l~--~~~~~~~i~l~n 142 (336)
++|.++++++. ++.+.+..|+|+.|...+...+.... .++ .+++|.++++.++ ...+++++++||
T Consensus 109 ~al~~~~~~l~~~~~~g~~~~v~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~l~~ 188 (417)
T 3g7q_A 109 SAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSR 188 (417)
T ss_dssp HHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCCCCTTEEEEEEES
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC
T ss_conf 99999999985445567741586137624999999815571531256640256654678798899986789973999889
Q ss_pred CCCCCCCCCCHHHHHH---HHHHCCCC-CCCCCCCCCCCCCC-CHH--HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHH
Q ss_conf 6633222223799999---99737872-02521002588662-003--32452001202346523343453131178899
Q T0636 143 PSNPTGQALSAGELDQ---LRQRAGKL-LIDETYVDYSSFRA-RGL--AYGENELVFRSFSKSYGLAGLRLGALFGPSEL 215 (336)
Q Consensus 143 PnNPTG~~~~~~~l~~---l~~~~~~~-IvDeaY~~f~~~~~-~~l--~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~ 215 (336)
||||||.+++.+++.+ ++++++.+ |+||+|.++..... ..+ ...++++++.|+|| |++||+|+||+++++++
T Consensus 189 p~NPtG~~~s~e~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~vi~~~s~sk-~~~~G~RiG~~~~~~~~ 267 (417)
T 3g7q_A 189 PTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDKT 267 (417)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCC-CCCCCCCEEEEECCHHH
T ss_conf 98986755416889999887764368099988755423455323432113652456458777-77898866876389999
Q ss_pred HHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHH---HHHHHHH-HHHHHHHHHHHH----HCCCEEEC-CCCCEEEEECC
Q ss_conf 999973378--7787777899999997459999---9999999-999999999998----58978616-98647886569
Q T0636 216 IAAMKRKQW--FCNVGTLDLHALEAALDNDRAR---EAHIAKT-LAQRRRVADALR----GLGYRVAS-SEANFVLVENA 284 (336)
Q Consensus 216 i~~l~~~~~--~~~~~~~~~~aa~~~l~~~~~~---~~~~~~~-~~~r~~l~~~l~----~lg~~~~~-s~~~Fi~~~~~ 284 (336)
++.+.+.+. .++.+.++|.++...+.+.++. .+.++.. ++.++.+.+.++ ..++.+.. ..|+|+|++++
T Consensus 268 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~l~~~~~~~~~P~gg~f~~~~l~ 347 (417)
T 3g7q_A 268 ITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFK 347 (417)
T ss_dssp HHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECT
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECC
T ss_conf 99999998662244310578899988623057777777766421013789999999853526827847883279999889
Q ss_pred ----CHHHHHHHHHHCCCEEEECCCCC---------CCCEEEEEEC-CHHHHHHHHHHHHHHHHC
Q ss_conf ----88999999987693896077888---------8874788747-989999999999999842
Q T0636 285 ----AGERTLRFLRERGIQVKDAGQFG---------LHHHIRISIG-REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 ----~~~~~~~~L~~~gi~vr~~~~fg---------~~~~iRis~~-~~ee~~~l~~aL~~~~e~ 335 (336)
+.+.+.+.|.++||.|+||+.|+ .++|+|||++ ++|++++.+++|+++.++
T Consensus 348 ~~~~~~~~~~~~l~~~gV~v~pG~~F~~~~~~~~~~~~~~~Ris~~~~~e~l~~~l~rL~~~l~~ 412 (417)
T 3g7q_A 348 DLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIER 412 (417)
T ss_dssp TCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCEEEEECHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 99974999999999699799835442677556666779979999559999999999999999999
No 57
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A*
Probab=100.00 E-value=1.5e-44 Score=306.77 Aligned_cols=319 Identities=19% Similarity=0.199 Sum_probs=232.6
Q ss_pred HHHHHHHHCCCCCCEECCCC----CCC-CCCCHHHHHHHHHHHHH--HHCC-CCCCHHHHHHHHHHHHC------CCHHH
Q ss_conf 15789750366553573576----548-88768999999999875--0058-89861899999999848------88543
Q T0636 4 GEAMDTEVRAAAQAVCLAFN----ENP-EAVEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHFS------CPEDN 69 (336)
Q Consensus 4 ~~~~~~~~~~~~~~i~L~~N----enp-~~p~~~v~~al~~~~~~--~~~Y-pd~~~~~Lr~aia~~~~------v~~d~ 69 (336)
.+++++ .+.++.|+|+.+ ++- .+++|.|++|....+.+ .+.| |..|.++||++|++++. +++++
T Consensus 19 ~~~~~~--d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~lReaia~~~~~~~~~~~~~~~ 96 (401)
T 7aat_A 19 TEAFKR--DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGR 96 (401)
T ss_dssp HHHHHH--CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTC
T ss_pred HHHHHC--CCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999846--889995886377776888998998899999999963888899999887899999999998610588788676
Q ss_pred EEEECCHH-----HHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCC--CCCCCHHHHHHH-----CCH
Q ss_conf 88607788-----9999999984--699257638873569999998188036415543--567788999730-----002
Q T0636 70 LMLVRGID-----ECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV-----SRD 135 (336)
Q Consensus 70 I~~t~Gs~-----~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~--~~~~d~~~l~~~-----~~~ 135 (336)
|+++.|++ +++..++.++ +||.|++++|+|+.|...+...|.+++.+|+.+ .+..+.+.+.+. .++
T Consensus 97 i~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (401)
T 7aat_A 97 YVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKS 176 (401)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTC
T ss_pred EEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHCCCCC
T ss_conf 89945717789999999998741799998998169871178999985995799625314303569999999986278983
Q ss_pred HHHHHHCCCCCCCCCCCHHHHHH---HHHHCCCCCC-CCCCCCCCCCC--CCH------HHHCCCHHHHHHHHHHHCCCC
Q ss_conf 43133036633222223799999---9973787202-52100258866--200------332452001202346523343
Q T0636 136 DCVVLANPSNPTGQALSAGELDQ---LRQRAGKLLI-DETYVDYSSFR--ARG------LAYGENELVFRSFSKSYGLAG 203 (336)
Q Consensus 136 ~~i~l~nPnNPTG~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~~~~--~~~------l~~~~n~iv~~S~SK~~gl~G 203 (336)
+++++||||||||.+++++++.+ ++++++.+|+ ||+|.+|.-.. ... ....++.+++.|+||.|+++|
T Consensus 177 ~~ii~~~P~NPTG~v~s~e~~~~l~~~a~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 256 (401)
T 7aat_A 177 IILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYG 256 (401)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCC
T ss_conf 89997899999587789999999999876465799995471131048865446777666421564137731444566766
Q ss_pred CCCEEECCCHHHHHHHHHCC---------CCCCCCHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 45313117889999997337---------877877778999999974599-------99999999999999999999858
Q T0636 204 LRLGALFGPSELIAAMKRKQ---------WFCNVGTLDLHALEAALDNDR-------AREAHIAKTLAQRRRVADALRGL 267 (336)
Q Consensus 204 lRiG~~i~~~~~i~~l~~~~---------~~~~~~~~~~~aa~~~l~~~~-------~~~~~~~~~~~~r~~l~~~l~~l 267 (336)
+|+||++++.++++.+.+.. ...+.+.+.|.++...+.+.. +++..++++.+.|+.+.+.|+++
T Consensus 257 ~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 257 ERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp GCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77489983588899999999998763114424121899999998617878899999999999999999999999999984
Q ss_pred CC----EEE-CCCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC--CHHHHHHHHHHHHHHH
Q ss_conf 97----861-698647886569889999999876938960778888874788747--9899999999999998
Q T0636 268 GY----RVA-SSEANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYS 333 (336)
Q Consensus 268 g~----~~~-~s~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~--~~ee~~~l~~aL~~~~ 333 (336)
+. .++ |..|.|+|++++ .+.+.+.++++||.+.|| +|||++ ++++++++.+++++++
T Consensus 337 ~~~~~~~~~~~~gG~F~~~~ls-~e~~~~Ll~e~gV~~~~g--------~Ris~a~~~~~~i~~~a~ai~~v~ 400 (401)
T 7aat_A 337 GSSHNWQHITDQIGMFCFTGLK-PEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp TCCSCCHHHHHCCSSEEECCCC-HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred CCCCCCEEECCCCEEEEECCCC-HHHHHHHHHCCCEEECCC--------EEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 7988813767897699944989-999999998398996797--------089844598777999999999974
No 58
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 1ars_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* 1cq7_A* ...
Probab=100.00 E-value=1.1e-42 Score=294.69 Aligned_cols=312 Identities=19% Similarity=0.185 Sum_probs=224.2
Q ss_pred CCCCCEECCCC----CCC-CCCCHHHHHHHHHHHHH--HHCC-CCCCHHHHHHHHHHHHC----C--CHHHEE--EECCH
Q ss_conf 66553573576----548-88768999999999875--0058-89861899999999848----8--854388--60778
Q T0636 13 AAAQAVCLAFN----ENP-EAVEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHFS----C--PEDNLM--LVRGI 76 (336)
Q Consensus 13 ~~~~~i~L~~N----enp-~~p~~~v~~al~~~~~~--~~~Y-pd~~~~~Lr~aia~~~~----v--~~d~I~--~t~Gs 76 (336)
+.++.|+|+.+ +++ .++++.|++|+.+..++ .+.| |..|.++||+++++++. . .+++++ .+.|+
T Consensus 24 ~~~~~inL~iG~~~d~~~~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
T 2q7w_A 24 ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGG 103 (396)
T ss_dssp ----CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHH
T ss_pred CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH
T ss_conf 89996882277876888999988899999999962898898898777899999999999745798778873999547478
Q ss_pred HHHHHHH--HHH--HCCCCEEECCCCCHHHHHHHHHHCCCEEEECCCC--CCCCCHHHHHHH-----CCHHHHHHHCCCC
Q ss_conf 8999999--998--4699257638873569999998188036415543--567788999730-----0024313303663
Q T0636 77 DECFDRI--SAE--FSSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV-----SRDDCVVLANPSN 145 (336)
Q Consensus 77 ~~~i~~~--~~~--~~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~--~~~~d~~~l~~~-----~~~~~i~l~nPnN 145 (336)
..++.++ +.. -+||.|++++|+|+.|...++..|.+++.+|+.. ++.+|.+.+.+. .+++++++|||||
T Consensus 104 ~~~~~l~~~~~~~~~~gd~v~~p~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~p~N 183 (396)
T 2q7w_A 104 TGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHN 183 (396)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCT
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 99999999999742898579993778763899999869978973055212557788899999985478978999799999
Q ss_pred CCCCCCCHHHHHH---HHHHCCCCCC-CCCCCCCCCCCC--CH-----HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHH
Q ss_conf 3222223799999---9973787202-521002588662--00-----33245200120234652334345313117889
Q T0636 146 PTGQALSAGELDQ---LRQRAGKLLI-DETYVDYSSFRA--RG-----LAYGENELVFRSFSKSYGLAGLRLGALFGPSE 214 (336)
Q Consensus 146 PTG~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~~~~~--~~-----l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~ 214 (336)
|||.+++++++++ ++++++.+|+ ||+|.+|..... .. ....++++++.|+||.|+++|+|+||++++++
T Consensus 184 PTG~~~s~~~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~RvG~~~~~~~ 263 (396)
T 2q7w_A 184 PTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAA 263 (396)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEECCCCCCCEEEEECCH
T ss_conf 99877798999888876236613899871656344798665268775565066516873163100022577025896426
Q ss_pred HHHHHHHC--------CCC-CCCCHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHCCCE----E-EC
Q ss_conf 99999733--------787-7877778999999974599-------99999999999999999999858978----6-16
Q T0636 215 LIAAMKRK--------QWF-CNVGTLDLHALEAALDNDR-------AREAHIAKTLAQRRRVADALRGLGYR----V-AS 273 (336)
Q Consensus 215 ~i~~l~~~--------~~~-~~~~~~~~~aa~~~l~~~~-------~~~~~~~~~~~~r~~l~~~l~~lg~~----~-~~ 273 (336)
+++...+. +.. .+.+...|.++..++.+.. +++..++++.+.|+.+.+.|+++|.. + .+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~i~~ 343 (396)
T 2q7w_A 264 DSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIK 343 (396)
T ss_dssp SHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC
T ss_conf 79999999999998750323433268899999860686778999999999999999999999999998389877305648
Q ss_pred CCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC--CHHHHHHHHHHHHHHH
Q ss_conf 98647886569889999999876938960778888874788747--9899999999999998
Q T0636 274 SEANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYS 333 (336)
Q Consensus 274 s~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~--~~ee~~~l~~aL~~~~ 333 (336)
..|.|+|++++ .+.+.+.+.++||++.|++ |||++ ++++++++.+++++++
T Consensus 344 ~~G~F~~~~ls-~e~~~~L~~e~~V~~~~g~--------Ri~~agl~~~~i~~~~~ai~~V~ 396 (396)
T 2q7w_A 344 QNGMFSFSGLT-KEQVLRLREEFGVYAVASG--------RVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp CCSSEEECCCC-HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred CCEEEEEECCC-HHHHHHHHHHCCEEECCCC--------EEEECCCCHHHHHHHHHHHHHHC
T ss_conf 97189984949-9999999982899967998--------79963799888999999999869
No 59
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=6e-42 Score=290.01 Aligned_cols=317 Identities=16% Similarity=0.164 Sum_probs=222.9
Q ss_pred HHCCCCCCEECCCC----CCC-CCCCHHHHHHHHHHHHH---HHCC-CCCCHHHHHHHHHHHH----C--CCHHHEE--E
Q ss_conf 50366553573576----548-88768999999999875---0058-8986189999999984----8--8854388--6
Q T0636 10 EVRAAAQAVCLAFN----ENP-EAVEPRVQAAIAAAAAR---INRY-PFDAEPRVMRKLAEHF----S--CPEDNLM--L 72 (336)
Q Consensus 10 ~~~~~~~~i~L~~N----enp-~~p~~~v~~al~~~~~~---~~~Y-pd~~~~~Lr~aia~~~----~--v~~d~I~--~ 72 (336)
+..+.++.|+|+.+ ++. .+++|.|++|......+ .++| |..|.++||+++++++ + +.+++++ .
T Consensus 25 ~~~~~~~~InlsiG~~~d~~g~~p~~~~V~~A~~~i~~~~~~~~~Y~p~~G~p~lreaia~~~~~~~~~~~~~~~~~~~~ 104 (412)
T 1ajs_A 25 REDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQ 104 (412)
T ss_dssp HTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred HCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEC
T ss_conf 37899993884078876988999888999999999973788788889977629999999999732258421246513522
Q ss_pred ECCHHHH-------HHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC---CCCCCCHHHHHH-----HCCH
Q ss_conf 0778899-------99999984--69925763887356999999818803641554---356778899973-----0002
Q T0636 73 VRGIDEC-------FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT---DDLLLDPNDLAQ-----VSRD 135 (336)
Q Consensus 73 t~Gs~~~-------i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~---~~~~~d~~~l~~-----~~~~ 135 (336)
|.|...+ +...+.++ +||.|++++|+|+.|...++..|...+.++.. +.+..|.+.+.+ ..++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~pgd~Vl~~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (412)
T 1ajs_A 105 SLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFS 184 (412)
T ss_dssp EEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 76317777769999998777513898748956888723799999859812242135652346768899999986387883
Q ss_pred HHHHHHCCCCCCCCCCCHHHHHH---HHHHCCCCCC-CCCCCCCCCCC--CC--H----HHHCCCHHHHHHHHHHHCCCC
Q ss_conf 43133036633222223799999---9973787202-52100258866--20--0----332452001202346523343
Q T0636 136 DCVVLANPSNPTGQALSAGELDQ---LRQRAGKLLI-DETYVDYSSFR--AR--G----LAYGENELVFRSFSKSYGLAG 203 (336)
Q Consensus 136 ~~i~l~nPnNPTG~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~~~~--~~--~----l~~~~n~iv~~S~SK~~gl~G 203 (336)
+++++||||||||.+++.+++++ ++++++.+|+ ||+|.+|.-.. .. . ....++++++.|+||.|+++|
T Consensus 185 ~~il~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 264 (412)
T 1ajs_A 185 IFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYN 264 (412)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC
T ss_conf 89995799998898899999999999998749349973234665348977770766656530661369961231032467
Q ss_pred CCCEEECCCHHHHHHHHH---------CCCCCCCCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 453131178899999973---------3787787777899999997459-------999999999999999999999858
Q T0636 204 LRLGALFGPSELIAAMKR---------KQWFCNVGTLDLHALEAALDND-------RAREAHIAKTLAQRRRVADALRGL 267 (336)
Q Consensus 204 lRiG~~i~~~~~i~~l~~---------~~~~~~~~~~~~~aa~~~l~~~-------~~~~~~~~~~~~~r~~l~~~l~~l 267 (336)
+|+||+++++++++.+.. .....+.+..+|.++..++.+. +++...++++.++|+.+.+.|+++
T Consensus 265 ~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 344 (412)
T 1ajs_A 265 ERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEAL 344 (412)
T ss_dssp GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87202433726799999999899887523506446899999999963978899999999999999999999999999983
Q ss_pred CC----EEE-CCCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC--CHHHHHHHHHHHHHHHHC
Q ss_conf 97----861-698647886569889999999876938960778888874788747--989999999999999842
Q T0636 268 GY----RVA-SSEANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 268 g~----~~~-~s~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~--~~ee~~~l~~aL~~~~e~ 335 (336)
+. .++ |..|.|+|+++ +.+.+.+.+.++||++.||+ |||++ ++++++++.+++++.+++
T Consensus 345 ~~~~~~~~~~~~~G~F~~~~l-~~~~~~~L~~e~gV~~~pg~--------Ri~~a~~~~~~i~~la~~I~~~~~~ 410 (412)
T 1ajs_A 345 KTPGTWNHITDQIGMFSFTGL-NPKQVEYLINQKHIYLLPSG--------RINMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp TCSSCCHHHHHCCSSEEECCC-CHHHHHHHHHTTCEECCTTS--------EEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCEEEEECCC-CHHHHHHHHHCCCEEECCCC--------EEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 899871577799746984597-99999999981999981896--------4883269888899999999999996
No 60
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal aldimine, schiff base; HET: PLR; 2.35A {Escherichia coli k-12} PDB: 3tat_A*
Probab=100.00 E-value=8.1e-42 Score=289.17 Aligned_cols=312 Identities=18% Similarity=0.186 Sum_probs=217.9
Q ss_pred CCCCCEECCCC----CCC-CCCCHHHHHHHHHHHH---HHHCCC-CCCHHHHHHHHHHHHC------CCHHHEEEECCHH
Q ss_conf 66553573576----548-8876899999999987---500588-9861899999999848------8854388607788
Q T0636 13 AAAQAVCLAFN----ENP-EAVEPRVQAAIAAAAA---RINRYP-FDAEPRVMRKLAEHFS------CPEDNLMLVRGID 77 (336)
Q Consensus 13 ~~~~~i~L~~N----enp-~~p~~~v~~al~~~~~---~~~~Yp-d~~~~~Lr~aia~~~~------v~~d~I~~t~Gs~ 77 (336)
+.++.|+|+.+ |+. .+.+|.|++|...... ..+.|+ ..|.++||+++++++. +++++|+.+.|+.
T Consensus 24 ~~~~ki~l~iG~~~~~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~elr~aia~~~~~~~~~~~~~~~v~~~~~~~ 103 (397)
T 3fsl_A 24 PRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLG 103 (397)
T ss_dssp CCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESH
T ss_pred CCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCH
T ss_conf 99894885077772888998887899999999971865567789966689999999999851369766767589846643
Q ss_pred HH----HHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCC--CCCCHHHHHHH-----CCHHHHHHHCCC
Q ss_conf 99----99999984--6992576388735699999981880364155435--67788999730-----002431330366
Q T0636 78 EC----FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD--LLLDPNDLAQV-----SRDDCVVLANPS 144 (336)
Q Consensus 78 ~~----i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~--~~~d~~~l~~~-----~~~~~i~l~nPn 144 (336)
.+ +.+++..+ +||.|++++|+|+.|...++..|.+++.+|+.++ +.+|++++.+. .+++++++||||
T Consensus 104 ~~~~~~~~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 183 (397)
T 3fsl_A 104 GSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCH 183 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSC
T ss_pred HHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 47789999999886289983586489883047999985997999835244456766266677876178870899978997
Q ss_pred CCCCCCCCHHHHHH---HHHHCCCCCC-CCCCCCCCC--CCCC-HH----HHCCCHHHHHHHHHHHCCCCCCCEEECCCH
Q ss_conf 33222223799999---9973787202-521002588--6620-03----324520012023465233434531311788
Q T0636 145 NPTGQALSAGELDQ---LRQRAGKLLI-DETYVDYSS--FRAR-GL----AYGENELVFRSFSKSYGLAGLRLGALFGPS 213 (336)
Q Consensus 145 NPTG~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~~--~~~~-~l----~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~ 213 (336)
||||.+++.+++.+ ++++++.+|+ ||+|.+|.- .... .+ ...++++++.||||+|+++|+|+||++++.
T Consensus 184 NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~ 263 (397)
T 3fsl_A 184 NPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMC 263 (397)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEEC
T ss_pred CCCCHHHCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEECCCCCEEEEEECH
T ss_conf 98874107569999999873079889832020222368865531444333415641132046513423578668997161
Q ss_pred HHHHHHHHC---------CCCCCCCHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHCC----CEEEC
Q ss_conf 999999733---------78778777789999999745999999-------99999999999999998589----78616
Q T0636 214 ELIAAMKRK---------QWFCNVGTLDLHALEAALDNDRAREA-------HIAKTLAQRRRVADALRGLG----YRVAS 273 (336)
Q Consensus 214 ~~i~~l~~~---------~~~~~~~~~~~~aa~~~l~~~~~~~~-------~~~~~~~~r~~l~~~l~~lg----~~~~~ 273 (336)
.+++.+.+. ....+.+...|.++...+.+.++..+ ..+++...|+.+.+.|+..+ +.+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 343 (397)
T 3fsl_A 264 EDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLL 343 (397)
T ss_dssp SSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 77899999999999876513467727999999986089899999999999999999999999998889858998769966
Q ss_pred C-CCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC--CHHHHHHHHHHHHHHH
Q ss_conf 9-8647886569889999999876938960778888874788747--9899999999999998
Q T0636 274 S-EANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYS 333 (336)
Q Consensus 274 s-~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~--~~ee~~~l~~aL~~~~ 333 (336)
+ .|.|+|++++ .+.+.+.+.++||++.|++ |||++ ++++++++.+++++++
T Consensus 344 ~~~G~F~~~~ls-~e~~~~L~~e~gV~l~~g~--------Ri~~a~l~~~~i~~l~~ai~~v~ 397 (397)
T 3fsl_A 344 NQRGMFSYTGLS-AAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp HCCSSEEECCCC-HHHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred CCCCEEEEECCC-HHHHHHHHHHCCEEECCCC--------EEEECCCCHHHHHHHHHHHHHHC
T ss_conf 898328851829-9999999995999926972--------79845799889999999999869
No 61
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-41 Score=288.04 Aligned_cols=315 Identities=18% Similarity=0.159 Sum_probs=222.2
Q ss_pred HCCCCCCEECCCC----CCC-CCCCHHHHHHHHHHHH---HHHCCC-CCCHHHHHHHHHHHH----C--CCHHHE--EEE
Q ss_conf 0366553573576----548-8876899999999987---500588-986189999999984----8--885438--860
Q T0636 11 VRAAAQAVCLAFN----ENP-EAVEPRVQAAIAAAAA---RINRYP-FDAEPRVMRKLAEHF----S--CPEDNL--MLV 73 (336)
Q Consensus 11 ~~~~~~~i~L~~N----enp-~~p~~~v~~al~~~~~---~~~~Yp-d~~~~~Lr~aia~~~----~--v~~d~I--~~t 73 (336)
..+.++.|+|+.+ ++. .+++|.|++|...... ..+.|+ ..|.++||+++++++ + +.++++ ++|
T Consensus 25 ~d~~~~kInL~iG~y~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~~~~~~~~~~~~~ 104 (412)
T 1yaa_A 25 QDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQS 104 (412)
T ss_dssp TCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEE
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
T ss_conf 68898968830777748889999878999999999727665788999756099999999998400276533221100014
Q ss_pred CCHHHHHHHHHHH--H--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCC--CCCCCHHHHHHH-----CCHHHHHHHC
Q ss_conf 7788999999998--4--699257638873569999998188036415543--567788999730-----0024313303
Q T0636 74 RGIDECFDRISAE--F--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV-----SRDDCVVLAN 142 (336)
Q Consensus 74 ~Gs~~~i~~~~~~--~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~--~~~~d~~~l~~~-----~~~~~i~l~n 142 (336)
.|+..++.++... + +||.|++++|+|+.|...+...|..++.+|..+ .+..+.+.+.+. .+++++++||
T Consensus 105 ~~~~~~~~~~~~~~~~~~pgd~Vlip~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 184 (412)
T 1yaa_A 105 LSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSC 184 (412)
T ss_dssp EHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECS
T ss_pred CCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECC
T ss_conf 53056899999987424899988557877655178999759953135433345544221012322114787538999437
Q ss_pred CCCCCCCCCCHHHHHHH---HHHCCCCCC-CCCCCCCCCCCC--CH---------HHHCCCHHHHHHHHHHHCCCCCCCE
Q ss_conf 66332222237999999---973787202-521002588662--00---------3324520012023465233434531
Q T0636 143 PSNPTGQALSAGELDQL---RQRAGKLLI-DETYVDYSSFRA--RG---------LAYGENELVFRSFSKSYGLAGLRLG 207 (336)
Q Consensus 143 PnNPTG~~~~~~~l~~l---~~~~~~~Iv-DeaY~~f~~~~~--~~---------l~~~~n~iv~~S~SK~~gl~GlRiG 207 (336)
||||||.+++.+++.+| +++++.+|+ ||+|.+|.-... .. ....+++|+++||||.|+|+|+|+|
T Consensus 185 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG 264 (412)
T 1yaa_A 185 AHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVG 264 (412)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEE
T ss_conf 89983764899999999999864591462250244441388556414432323201357762999714776557777607
Q ss_pred EECCCHHHHHHHHH------------CCCC-CCCCHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 31178899999973------------3787-7877778999999974599-------99999999999999999999858
Q T0636 208 ALFGPSELIAAMKR------------KQWF-CNVGTLDLHALEAALDNDR-------AREAHIAKTLAQRRRVADALRGL 267 (336)
Q Consensus 208 ~~i~~~~~i~~l~~------------~~~~-~~~~~~~~~aa~~~l~~~~-------~~~~~~~~~~~~r~~l~~~l~~l 267 (336)
|+++++++++.+.+ .+.. .+.+...|.++...+.+.. ++++.++.+.+.|+.+.+.|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 344 (412)
T 1yaa_A 265 CFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKL 344 (412)
T ss_dssp EEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89964336677888998887767899998863477499999998517877899999999999999999999999999984
Q ss_pred C----CEEEC-CCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC--CHHHHHHHHHHHHHHHH
Q ss_conf 9----78616-98647886569889999999876938960778888874788747--98999999999999984
Q T0636 268 G----YRVAS-SEANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYSD 334 (336)
Q Consensus 268 g----~~~~~-s~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~--~~ee~~~l~~aL~~~~e 334 (336)
| +.+++ ..|.|+|+++. .+.+.+.+.++||++.|++ |||++ ++++++++.++|++++.
T Consensus 345 g~~~~~~~~~~~gG~F~~~~ls-~e~~~~L~~~~~V~~~~g~--------Ris~~g~~~~~i~~la~ai~~v~k 409 (412)
T 1yaa_A 345 GTPGNWDHIVNQCGMFSFTGLT-PQMVKRLEETHAVYLVASG--------RASIAGLNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp TCSSCCTHHHHCCSSEEECCCC-HHHHHHHHHHHCEECCTTS--------EEEGGGCCTTTHHHHHHHHHHHHH
T ss_pred CCCCCCCEECCCCEEEEECCCC-HHHHHHHHHHCCEEECCCC--------EEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 8988862568996179833989-9999999985988977988--------798513988889999999999998
No 62
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=4e-40 Score=278.18 Aligned_cols=313 Identities=18% Similarity=0.172 Sum_probs=218.6
Q ss_pred HCCCCCCEECCCC----CCC-CCCCHHHHHHHHHHHHH--HHCC-CCCCHHHHHHHHHHHH----CC--CHHH-EEEECC
Q ss_conf 0366553573576----548-88768999999999875--0058-8986189999999984----88--8543-886077
Q T0636 11 VRAAAQAVCLAFN----ENP-EAVEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHF----SC--PEDN-LMLVRG 75 (336)
Q Consensus 11 ~~~~~~~i~L~~N----enp-~~p~~~v~~al~~~~~~--~~~Y-pd~~~~~Lr~aia~~~----~v--~~d~-I~~t~G 75 (336)
+.+.++.|+|+.+ ++. .+++|.|++|+.+.+++ .+.| |..|.++||+++++++ +. .++. ++++.|
T Consensus 22 ~d~~~~kInl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~~~~~~~~ 101 (394)
T 2ay1_A 22 ADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGT 101 (394)
T ss_dssp HCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHH
T ss_pred CCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
T ss_conf 78999978850787748889989877999999998518878888997778999999999985545533355431046718
Q ss_pred HHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCC--CCCCHHHHHHH-----CCHHHHHHHCCCCC
Q ss_conf 889999999984--6992576388735699999981880364155435--67788999730-----00243133036633
Q T0636 76 IDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD--LLLDPNDLAQV-----SRDDCVVLANPSNP 146 (336)
Q Consensus 76 s~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~--~~~d~~~l~~~-----~~~~~i~l~nPnNP 146 (336)
++.++.+.+.++ +||.|++++|+|+.|...++..|.+++.+|+.++ +..+.+++.+. .++++++++|||||
T Consensus 102 ~~~~l~~~~~~~~~pgd~Vli~~P~y~~y~~~~~~~G~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~NP 181 (394)
T 2ay1_A 102 GALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNP 181 (394)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 89999998888737850799956532120799998599799953542103454304567776640368369982588898
Q ss_pred CCCCCCHHHHHH---HHHHCCCCCC-CCCCCCCCCC--CCCHH-----HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHH
Q ss_conf 222223799999---9973787202-5210025886--62003-----32452001202346523343453131178899
Q T0636 147 TGQALSAGELDQ---LRQRAGKLLI-DETYVDYSSF--RARGL-----AYGENELVFRSFSKSYGLAGLRLGALFGPSEL 215 (336)
Q Consensus 147 TG~~~~~~~l~~---l~~~~~~~Iv-DeaY~~f~~~--~~~~l-----~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~ 215 (336)
||.+++++++++ ++++++.+|+ ||+|.+|... ..... ....+.+++.|+||+++++|+|+||+++....
T Consensus 182 TG~~~s~e~~~~l~~~a~~~~i~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~g~r~g~~~~~~~~ 261 (394)
T 2ay1_A 182 TGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCAD 261 (394)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 88779999999999987525276246606545556886552166543320454310203434410245542120035477
Q ss_pred H-------HHHHHC--CCCCCCCHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHCC----CEEE-CC
Q ss_conf 9-------999733--7877877778999999974599-------999999999999999999998589----7861-69
Q T0636 216 I-------AAMKRK--QWFCNVGTLDLHALEAALDNDR-------AREAHIAKTLAQRRRVADALRGLG----YRVA-SS 274 (336)
Q Consensus 216 i-------~~l~~~--~~~~~~~~~~~~aa~~~l~~~~-------~~~~~~~~~~~~r~~l~~~l~~lg----~~~~-~s 274 (336)
. ..+... ....+.+...|.++...+.+.. +.+..++++.+.|+.+.+.|+++| +.++ |.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~ 341 (394)
T 2ay1_A 262 AATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEH 341 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 99999998777664022224551788888876305778999999999999999999999999999985898864687799
Q ss_pred CCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC--CHHHHHHHHHHHHHH
Q ss_conf 8647886569889999999876938960778888874788747--989999999999999
Q T0636 275 EANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEY 332 (336)
Q Consensus 275 ~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~--~~ee~~~l~~aL~~~ 332 (336)
.|.|+|++++ .+.+.+.+.++||.+.||+ |||++ ++++++++.+||.++
T Consensus 342 gG~F~~~~ls-~e~~~~L~~e~~V~~~~g~--------Ris~a~l~~~~i~~l~~ai~~v 392 (394)
T 2ay1_A 342 RGMFSRLGAT-PEQVKRIKEEFGIYMVGDS--------RINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp CSSEEECCCC-HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred CEEEEECCCC-HHHHHHHHHHCCEEECCCC--------EEEECCCCHHHHHHHHHHHHHH
T ss_conf 7069842959-9999999984998847985--------7995569988899999999982
No 63
>3meb_A Aspartate aminotransferase; pyridoxal phosphate, structural genomics, seattle structural genomics center for infectious disease; HET: PLP; 1.90A {Giardia lamblia atcc 50803}
Probab=100.00 E-value=2.1e-38 Score=267.03 Aligned_cols=322 Identities=16% Similarity=0.136 Sum_probs=218.2
Q ss_pred HHHHHHHHCCCCCCEECCCC----CCC-CCCCHHHHHHHHHHHHH----HHCC-CCCCHHHHHHHHHHHH-C-----CCH
Q ss_conf 15789750366553573576----548-88768999999999875----0058-8986189999999984-8-----885
Q T0636 4 GEAMDTEVRAAAQAVCLAFN----ENP-EAVEPRVQAAIAAAAAR----INRY-PFDAEPRVMRKLAEHF-S-----CPE 67 (336)
Q Consensus 4 ~~~~~~~~~~~~~~i~L~~N----enp-~~p~~~v~~al~~~~~~----~~~Y-pd~~~~~Lr~aia~~~-~-----v~~ 67 (336)
.+++++ ...++-|+|..+ |+- .+.+|.|++|......+ .+.| |-.|.++||+++++++ + +..
T Consensus 40 ~~~~~~--d~~~~kinL~iG~y~d~~G~~~v~~~Vk~A~~~l~~~~~~~~~~Y~p~~G~~~lreaia~~~~~~~~~~~~~ 117 (448)
T 3meb_A 40 TVLYNA--DTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQE 117 (448)
T ss_dssp HHHHHH--CCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTTCHHHHT
T ss_pred HHHHHC--CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf 999845--999786782156543889997887799999999972656678877986567999999999984146864334
Q ss_pred HH--EEEECCHHHHHHHHHHH----HCCCCEEECCCCCHHHHHHHHHHCCCEE----EE-C--CCCCCCCCHHHHHHH--
Q ss_conf 43--88607788999999998----4699257638873569999998188036----41-5--543567788999730--
Q T0636 68 DN--LMLVRGIDECFDRISAE----FSSMRFVTAWPGFDGYRARIAVSGLRHF----EI-G--LTDDLLLDPNDLAQV-- 132 (336)
Q Consensus 68 d~--I~~t~Gs~~~i~~~~~~----~~~~~vii~~P~y~~y~~~~~~~g~~~~----~v-p--~~~~~~~d~~~l~~~-- 132 (336)
++ ++.+.|++.++.+.+.. .+|++|++++|+|+.|...+...|.... .. . .+..+.+|.+.+.+.
T Consensus 118 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~v~ip~P~w~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 197 (448)
T 3meb_A 118 GRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQ 197 (448)
T ss_dssp TCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHH
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 51477525207889999998752038999899808986407999998557630256303565654444648899999886
Q ss_pred ---CCHHHHHHHCCCCCCCCCCCHHHHHHH---HHHCCCCC-CCCCCCCCCCCCC----CHH----HHCCCHHHHHHHHH
Q ss_conf ---002431330366332222237999999---97378720-2521002588662----003----32452001202346
Q T0636 133 ---SRDDCVVLANPSNPTGQALSAGELDQL---RQRAGKLL-IDETYVDYSSFRA----RGL----AYGENELVFRSFSK 197 (336)
Q Consensus 133 ---~~~~~i~l~nPnNPTG~~~~~~~l~~l---~~~~~~~I-vDeaY~~f~~~~~----~~l----~~~~n~iv~~S~SK 197 (336)
.+++++++++||||||.+++.+++++| +++++.++ +||+|.+|..... ..+ ...++++++.||||
T Consensus 198 ~~~~~~~vil~~~p~NPTG~~~s~e~~~~i~~~~~~~~~~ii~De~Y~~~~~~~~~~d~~~~~~~~~~~~~~iv~~s~SK 277 (448)
T 3meb_A 198 SAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSK 277 (448)
T ss_dssp HSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTT
T ss_pred HCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 27888789996899998983289999999999986559799965434543059967671655555422652000146555
Q ss_pred HHCCCCCCCEEECCCHHH---------------HHHHHH-CCCC-CCCCHHHHHHHHHHHHHHH-------HHHHHHHHH
Q ss_conf 523343453131178899---------------999973-3787-7877778999999974599-------999999999
Q T0636 198 SYGLAGLRLGALFGPSEL---------------IAAMKR-KQWF-CNVGTLDLHALEAALDNDR-------AREAHIAKT 253 (336)
Q Consensus 198 ~~gl~GlRiG~~i~~~~~---------------i~~l~~-~~~~-~~~~~~~~~aa~~~l~~~~-------~~~~~~~~~ 253 (336)
.|+++|+|+||++++.+. ...+.. .+.. .+.+...|.++..++.+.. ++.+.+.++
T Consensus 278 ~~~l~G~RvG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~q~~~~~~l~d~~~~~~w~~el~~~~~~l 357 (448)
T 3meb_A 278 NFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARI 357 (448)
T ss_dssp TSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 55665672489995417889988667788777888999998777477984999999997048177899999999999999
Q ss_pred HHHHHHHHHHHHHCCCEEECCCCC----------EEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC--CHHH
Q ss_conf 999999999998589786169864----------7886569889999999876938960778888874788747--9899
Q T0636 254 LAQRRRVADALRGLGYRVASSEAN----------FVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REED 321 (336)
Q Consensus 254 ~~~r~~l~~~l~~lg~~~~~s~~~----------Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~--~~ee 321 (336)
.+.|+.+.++|+++|+.+.++.|. |.|..+ +.+.+.+.+.++||++.|++ .|||++ +++.
T Consensus 358 ~~rR~~l~~~L~~~g~~~~~~~g~f~~i~~~~GmF~~~~l-s~e~~~~L~~e~~V~~vpg~-------gRis~a~l~~~~ 429 (448)
T 3meb_A 358 HRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGL-TPEHVDYLKEKWSIYLVKAG-------GRMSMCGLTESN 429 (448)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCC-CHHHHHHHHHHHCEEECSGG-------GEEEGGGCCTTT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC-CHHHHHHHHHCCCEEEECCC-------EEEEEECCCHHH
T ss_conf 9999999999997499777999763786057775314699-99999999983899993698-------599981188888
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999842
Q T0636 322 NDRLLAALAEYSDH 335 (336)
Q Consensus 322 ~~~l~~aL~~~~e~ 335 (336)
++++.+++++...+
T Consensus 430 i~~la~aI~~~v~~ 443 (448)
T 3meb_A 430 CDYVAEAIHDAVTK 443 (448)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999983
No 64
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S beta lyase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=1.9e-31 Score=222.03 Aligned_cols=315 Identities=16% Similarity=0.160 Sum_probs=218.6
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH----------HHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH
Q ss_conf 57357654888768999999999875005889861----------89999999984888543886077889999999984
Q T0636 18 VCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAE----------PRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF 87 (336)
Q Consensus 18 i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~----------~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~ 87 (336)
|+|+-+- --++|+.|++++...+.+....|+..+ .+.|+++|+++|.++++|++|+|+++++..++.++
T Consensus 3 iyld~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ar~~la~~~ga~~~~v~~~~g~t~al~~~~~~l 81 (384)
T 1eg5_A 3 VYFDNNA-TTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV 81 (384)
T ss_dssp EECBTTT-CCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred EEEECCC-CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf 9777842-266999999999999997379865210899999999999999999983989672999199899999999999
Q ss_pred ------CCCCEEECCCCCHHHHHH---HHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHH
Q ss_conf ------699257638873569999---998188036415543567788999730--002431330366332222237999
Q T0636 88 ------SSMRFVTAWPGFDGYRAR---IAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGEL 156 (336)
Q Consensus 88 ------~~~~vii~~P~y~~y~~~---~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l 156 (336)
+|+.|++..++|+.+... ....|.++..+|.++++.+|++++++. .+++++++++|+||||.+.+.++|
T Consensus 82 ~~~~~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~d~e~le~~i~~~t~~v~v~~~~n~tG~~~~l~~i 161 (384)
T 1eg5_A 82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDV 161 (384)
T ss_dssp HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHH
T ss_pred HHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHH
T ss_conf 98615899989988985277999999998649889997039988758999985336795699997764788850101379
Q ss_pred HHHHHHCCC-CCC--CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC-----CCCCC
Q ss_conf 999973787-202--5210025886620033245200120234652334345313117889999997337-----87787
Q T0636 157 DQLRQRAGK-LLI--DETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ-----WFCNV 228 (336)
Q Consensus 157 ~~l~~~~~~-~Iv--DeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~-----~~~~~ 228 (336)
.+++++++. +++ |.++ ..+..+..+...+--+++.|++|.+|.+|++++|+.....+...+.... ..++.
T Consensus 162 ~~la~~~g~~vl~~~D~a~--~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~g~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 239 (384)
T 1eg5_A 162 TRIVKKKNKETLVHVDAVQ--TIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLRSGTQ 239 (384)
T ss_dssp HHHHHHHCTTCEEEEECTT--TTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTSCCCCSBCSSCTTTTTBCSCC
T ss_pred HHHHHHCCCEEEEEECCCE--ECCEEEEEHHHCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCC
T ss_conf 9999972994999932311--22545665655398689956863248997736898265021145533787673036774
Q ss_pred CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC-C---CCEEEEEC--CCHHHHHHHHHHCCCEEE
Q ss_conf 7778999999974-599999999999999999999998589786169-8---64788656--988999999987693896
Q T0636 229 GTLDLHALEAALD-NDRAREAHIAKTLAQRRRVADALRGLGYRVASS-E---ANFVLVEN--AAGERTLRFLRERGIQVK 301 (336)
Q Consensus 229 ~~~~~~aa~~~l~-~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s-~---~~Fi~~~~--~~~~~~~~~L~~~gi~vr 301 (336)
+.....++.+.++ ..+.+.+...+..+.++++.+.|++++..++.+ + .+++.+.+ .+++.+...|.++||.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~ 319 (384)
T 1eg5_A 240 NVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVS 319 (384)
T ss_dssp CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCCEEEEEECCCCHHHHHHHHHHCCEEEE
T ss_conf 29999999999998763699999999999999999998569889168010579679998389799999999975992996
Q ss_pred ECCCC--------------CC-----CCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 07788--------------88-----874788747---989999999999999842
Q T0636 302 DAGQF--------------GL-----HHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 302 ~~~~f--------------g~-----~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
+|... |. ++++|+|++ |+||+++++++|+|..+.
T Consensus 320 ~G~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~edvd~~v~~l~~i~~~ 375 (384)
T 1eg5_A 320 TSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSF 375 (384)
T ss_dssp C------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 37110387642047999739984446967999647889999999999999999998
No 65
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=2.9e-31 Score=220.84 Aligned_cols=308 Identities=15% Similarity=0.159 Sum_probs=222.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCC-CCC--CHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECC
Q ss_conf 76548887689999999998750058-898--6189999999984888543886077889999999984--699257638
Q T0636 22 FNENPEAVEPRVQAAIAAAAARINRY-PFD--AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAW 96 (336)
Q Consensus 22 ~Nenp~~p~~~v~~al~~~~~~~~~Y-pd~--~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~ 96 (336)
+|.-|.+.+|.|++||.... ++.| |.- -..++++.+++++|+++++|++|+|++++|..++.++ +||+|++++
T Consensus 13 ~~pGP~~~~~~v~~A~~~~~--~~h~~~~~~~~~~~~~~~l~~~~~~~~~~i~~t~g~t~a~~~~~~~l~~pGD~vlv~~ 90 (392)
T 2z9v_A 13 LTAGPVNAYPEVLRGLGRTV--LYDYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLA 90 (392)
T ss_dssp CSSSCCCCCHHHHHHTTSCC--CCTTSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEE
T ss_pred ECCCCCCCCHHHHHHHCCCC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 13899898599999838602--4667899999999999999998588998799918699999999998538999899965
Q ss_pred CCCHH--HHHHHHHHCCCEEEECCCCCCCCCHHHHHHH----CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC-CCC
Q ss_conf 87356--9999998188036415543567788999730----0024313303663322222379999999737872-025
Q T0636 97 PGFDG--YRARIAVSGLRHFEIGLTDDLLLDPNDLAQV----SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKL-LID 169 (336)
Q Consensus 97 P~y~~--y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~----~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~-IvD 169 (336)
|+|.. +...++..|++++.++.+.++.+|++++++. .++++|++++|+||||...+.++|.++++.++.+ ++|
T Consensus 91 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~n~tG~~~~l~~i~~la~~~g~~~ivD 170 (392)
T 2z9v_A 91 SGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVD 170 (392)
T ss_dssp SSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEECCHHHHHHHHHHCCCCEEEC
T ss_conf 87137999999998097689715778997799999998851988057413478998848777999999975314312201
Q ss_pred CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC----------------------CC
Q ss_conf 21002588662003324520012023465233434531311788999999733787----------------------78
Q T0636 170 ETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF----------------------CN 227 (336)
Q Consensus 170 eaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~----------------------~~ 227 (336)
++|..+..... .... ..-+++.|.+|.++.+ -.+||++.+++.++.+...... .+
T Consensus 171 ~~~~~~~~~~~-~~~~-~~d~~~~s~~K~l~~~-~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (392)
T 2z9v_A 171 AVSSFGGMKTH-PEDC-KADIYVTGPNKCLGAP-PGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFT 247 (392)
T ss_dssp CTTTBTTBSCC-GGGG-TCSEEEECSSSTTCCC-SCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSC
T ss_pred CCCCCCCCCCC-CCCC-CCEEEEECCCCCCCCC-CCEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 20124676775-3356-9829996264524689-9769999868999875235767640111267775430235666778
Q ss_pred CCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC-----EEEEECC---CHHHHHHHHHH-C
Q ss_conf 777789999999745--99999999999999999999998589786169864-----7886569---88999999987-6
Q T0636 228 VGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGLGYRVASSEAN-----FVLVENA---AGERTLRFLRE-R 296 (336)
Q Consensus 228 ~~~~~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~-----Fi~~~~~---~~~~~~~~L~~-~ 296 (336)
.+...+.++..+++. ...++...++....++++.+.|+++|++++.+... -++++.+ +++++.+.|++ +
T Consensus 248 ~~~~~~~al~~al~~~~~~~~~~~~~~~~~~a~~~~~~l~~~G~~~~~~~~~~~~~~v~~~~~p~g~d~~~~~~~L~~~~ 327 (392)
T 2z9v_A 248 PSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARY 327 (392)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 88999999999999987645999999999999999999985698863788022087189998999989999999998549
Q ss_pred CCEEEECCCCCCCCEEEEE-EC---CHHHHHHHHHHHHHHHH
Q ss_conf 9389607788888747887-47---98999999999999984
Q T0636 297 GIQVKDAGQFGLHHHIRIS-IG---REEDNDRLLAALAEYSD 334 (336)
Q Consensus 297 gi~vr~~~~fg~~~~iRis-~~---~~ee~~~l~~aL~~~~e 334 (336)
||.|.||..+..++++||+ +| .++++.+.+++|++.+.
T Consensus 328 gI~v~pG~~~~~~~~~Ri~~~g~~~~~~~~~~~l~~l~~~L~ 369 (392)
T 2z9v_A 328 GVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp CEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999978865457987998166576999999999999999999
No 66
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocysteine, aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.97 E-value=1.1e-28 Score=204.10 Aligned_cols=312 Identities=16% Similarity=0.134 Sum_probs=212.6
Q ss_pred CCCCCEECCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCC----------HHHHHHHHHHHHCCCHHHEEEECCHHHHHH
Q ss_conf 6655357357654888-76899999999987500588986----------189999999984888543886077889999
Q T0636 13 AAAQAVCLAFNENPEA-VEPRVQAAIAAAAARINRYPFDA----------EPRVMRKLAEHFSCPEDNLMLVRGIDECFD 81 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~-p~~~v~~al~~~~~~~~~Ypd~~----------~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~ 81 (336)
..++.++||.+- .+ +|..+++++.+........+... -.++|+.+|+++|+++++|++|+|+++++.
T Consensus 13 ~~~~~~yln~a~--~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~iA~~~g~~~~~v~~~~~~T~a~~ 90 (390)
T 1elu_A 13 GLANKTYFNFGG--QGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCD 90 (390)
T ss_dssp GGTTSEECCTTT--CCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHH
T ss_pred CCCCCEEEECCC--CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHH
T ss_conf 889989976973--257999999999999997452787630567899999999999999980999673999898899999
Q ss_pred HHHHHH---CCCCEEECCCCCHHH----HHHHHHHCCCEEEECCCCC--CCCCHHHHHHH--CCHHHHHHHCCCCCCCCC
Q ss_conf 999984---699257638873569----9999981880364155435--67788999730--002431330366332222
Q T0636 82 RISAEF---SSMRFVTAWPGFDGY----RARIAVSGLRHFEIGLTDD--LLLDPNDLAQV--SRDDCVVLANPSNPTGQA 150 (336)
Q Consensus 82 ~~~~~~---~~~~vii~~P~y~~y----~~~~~~~g~~~~~vp~~~~--~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~ 150 (336)
+++.++ +||+|++.+..|+.. ...++..|+++..+|.+.+ ...+.+++++. .+|+++++++++||||.+
T Consensus 91 ~~~~~l~~~~gd~Vv~~~~~~~s~~~~~~~la~~~g~~v~~vp~~~~~~~~~~~~~l~~~~~~~t~lv~~~~~~n~tG~~ 170 (390)
T 1elu_A 91 IVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQV 170 (390)
T ss_dssp HHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCB
T ss_pred HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEE
T ss_conf 99981735898989988897875899999998718859998043035772217999997179993699997887788512
Q ss_pred CCHHHHHHHHHHCC-----CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC--
Q ss_conf 23799999997378-----72025210025886620033245200120234652334345313117889999997337--
Q T0636 151 LSAGELDQLRQRAG-----KLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ-- 223 (336)
Q Consensus 151 ~~~~~l~~l~~~~~-----~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~-- 223 (336)
++.++|.+++++++ .+++|+++.- +......-....+ +++.|..|.++.| ..+|+++.+++.++.+....
T Consensus 171 ~pi~~i~~l~~~~~~~~~~~~~vD~a~~~-g~~~~d~~~~~~D-~~~~s~hK~l~gp-~G~G~l~v~~~~~~~~~p~~~g 247 (390)
T 1elu_A 171 LPLAEIMAVCRRHQGNYPVRVLVDGAQSA-GSLPLDFSRLEVD-YYAFTGHKWFAGP-AGVGGLYIHGDCLGEINPTYVG 247 (390)
T ss_dssp CCHHHHHHHHHHCCSSSCCEEEEECTTTB-TTBCCCTTTSCCS-EEEEESSSTTCCC-TTCEEEEECTTTGGGCCCCSCC
T ss_pred CCHHHHHHHHHHHCCCCCCEEEEECCCCC-CCCCCCHHHHCCC-EEEECCCCCCCCC-CCCEEEEECHHHHHHCCCCCCC
T ss_conf 46898889999854678964999666556-6544674561898-9998780236788-9776689768899755863468
Q ss_pred ----------------------CCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEC---C
Q ss_conf ----------------------8778777789999999745---9999999999999999999999858-978616---9
Q T0636 224 ----------------------WFCNVGTLDLHALEAALDN---DRAREAHIAKTLAQRRRVADALRGL-GYRVAS---S 274 (336)
Q Consensus 224 ----------------------~~~~~~~~~~~aa~~~l~~---~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~---s 274 (336)
...+.+..+..+..++++- ....+...+++.+.++++.+.|+++ |++++. +
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~r~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 327 (390)
T 1elu_A 248 WRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAP 327 (390)
T ss_dssp TTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCC
T ss_pred CCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
T ss_conf 87534554356453233201114578879999999999999996283999999999999999999863998697688887
Q ss_pred CCCEEEEEC---CCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHH
Q ss_conf 864788656---9889999999876938960778888874788747---989999999999999
Q T0636 275 EANFVLVEN---AAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEY 332 (336)
Q Consensus 275 ~~~Fi~~~~---~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~---~~ee~~~l~~aL~~~ 332 (336)
.++++.+.. .+.+.+.+.|.++||.|+.+.. ++++|+|++ |++|+++|+++|+|+
T Consensus 328 ~~~iv~f~~~~~~~~~~~~~~L~~~gi~v~~~~~---~~~lRis~~~~nt~edid~l~~~L~e~ 388 (390)
T 1elu_A 328 QAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIAD---PDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp SSSEEEEEECSSSCHHHHHHHHHHTTEECEEETT---TTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHCCEEEEECCC---CCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 7428999808988999999999978918983489---998999767889999999999999976
No 67
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus HB8} PDB: 2yri_A*
Probab=99.97 E-value=4.3e-29 Score=206.77 Aligned_cols=311 Identities=21% Similarity=0.212 Sum_probs=215.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCC-CC--CCHHHHHHHHHHHHCCCHHHE-E-EECCHHHHHHHHHHHH-CCCCEE
Q ss_conf 3576548887689999999998750058-89--861899999999848885438-8-6077889999999984-699257
Q T0636 20 LAFNENPEAVEPRVQAAIAAAAARINRY-PF--DAEPRVMRKLAEHFSCPEDNL-M-LVRGIDECFDRISAEF-SSMRFV 93 (336)
Q Consensus 20 L~~Nenp~~p~~~v~~al~~~~~~~~~Y-pd--~~~~~Lr~aia~~~~v~~d~I-~-~t~Gs~~~i~~~~~~~-~~~~vi 93 (336)
|+|+.-|.|.||.|++|+.+.. .+.| |+ +...++|+++++++|++++++ + .++|+++++.+++..+ +++.++
T Consensus 2 ~~~~pgP~~~~~~v~~A~~~~~--~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~~~~~~s~t~a~~~~~~~~~~g~~vv 79 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPM--RGHLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDRGPVLV 79 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCC--CCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSCCCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEE
T ss_conf 4156898798599999841330--56560999999999999999984979988899968579999999998578982899
Q ss_pred ECCCCCHHHH-HHHHHHCCCEEEECCCCCCCCCHHHHHHH---CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC-CC
Q ss_conf 6388735699-99998188036415543567788999730---0024313303663322222379999999737872-02
Q T0636 94 TAWPGFDGYR-ARIAVSGLRHFEIGLTDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKL-LI 168 (336)
Q Consensus 94 i~~P~y~~y~-~~~~~~g~~~~~vp~~~~~~~d~~~l~~~---~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~-Iv 168 (336)
+.+++|..+. ..+...+..+..++.++++.+|++.+++. .+++++++++|+||||.+++.++|.+++++++.+ ++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ai~~~~~~~v~~~~~~n~tG~~~~l~~I~~~~~~~g~~~~v 159 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFL 159 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEE
T ss_pred EECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHCCCCCEEEE
T ss_conf 97874889999999982995354178979986999999973459964999978889756871599996563347937999
Q ss_pred CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHC-----------------CCCCCCCHH
Q ss_conf 521002588662003324520012023465233434531311788999999733-----------------787787777
Q T0636 169 DETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRK-----------------QWFCNVGTL 231 (336)
Q Consensus 169 DeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~-----------------~~~~~~~~~ 231 (336)
|++|....- .........+ +++.|..|.++ .+..+|+++.++++++.+... ......+..
T Consensus 160 D~~~~~~~~-~~~~~~~~~d-~~~~~~~K~l~-~~~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
T 2yrr_A 160 DAVTTLGML-PFSMRAMGVD-YAFTGSQKCLS-APPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVL 236 (353)
T ss_dssp ECTTTTTTS-CCCHHHHTCS-EEECCTTSTTC-CCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHH
T ss_pred EECCCCCEE-EEECCCCEEE-EEEECCCCCCC-CCCCEEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHH
T ss_conf 503333257-7622674578-99943877466-79987999984789887247877676888887665327766776357
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC---CEEEEECC---CHHHHHHHHHHCCCEEEEC
Q ss_conf 89999999745--9999999999999999999999858978616986---47886569---8899999998769389607
Q T0636 232 DLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGLGYRVASSEA---NFVLVENA---AGERTLRFLRERGIQVKDA 303 (336)
Q Consensus 232 ~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~---~Fi~~~~~---~~~~~~~~L~~~gi~vr~~ 303 (336)
...++.+++.. .+......++....++.+.+.|++.|+.+++++. +.+.+..+ +++++.+.|.++||.|++|
T Consensus 237 ~~~a~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~L~~~gI~v~~G 316 (353)
T 2yrr_A 237 LHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGG 316 (353)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEECC
T ss_conf 99999999999998679999999999999999999865976368755686599997899999999999998789599846
Q ss_pred CCCCCCCEEEEE-EC---CHHHHHHHHHHHHHHHHC
Q ss_conf 788888747887-47---989999999999999842
Q T0636 304 GQFGLHHHIRIS-IG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 304 ~~fg~~~~iRis-~~---~~ee~~~l~~aL~~~~e~ 335 (336)
......+++||| +| ++|++++|+++|++++.-
T Consensus 317 ~~~~~~~~iRvs~~g~~~t~edv~~~l~al~~~La~ 352 (353)
T 2yrr_A 317 IGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp CGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 501379989997888889999999999999999852
No 68
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, PLP, virulence, acyltransferase, aminotransferase, pyridoxal phosphate, transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.96 E-value=4.6e-27 Score=193.57 Aligned_cols=313 Identities=15% Similarity=0.175 Sum_probs=221.6
Q ss_pred HCCCCCCEECCCCCCCCCCC--HHHHHHHHHHHHHH--------HCC-CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHH
Q ss_conf 03665535735765488876--89999999998750--------058-89861899999999848885438860778899
Q T0636 11 VRAAAQAVCLAFNENPEAVE--PRVQAAIAAAAARI--------NRY-PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDEC 79 (336)
Q Consensus 11 ~~~~~~~i~L~~Nenp~~p~--~~v~~al~~~~~~~--------~~Y-pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~ 79 (336)
.+++.+.|.|+|| |-||.. |.+++++.+++.+. +.| .++...+|.+.+|+++|.+ +.+++++| +++
T Consensus 55 ~~~~~~~i~~~sn-dYLgl~~hp~v~~a~~~a~~~~g~~~~~s~~~~g~~~~~~~LE~~lA~~~G~E-~al~~~SG-~~A 131 (409)
T 3kki_A 55 KQASPDDIILQSN-DYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFD-ECLLSQSG-WNA 131 (409)
T ss_dssp CCCCTTSEECCCS-CTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCS-EEEEESCH-HHH
T ss_pred CCCCCCEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-EEEEECCH-HHH
T ss_conf 7799986885886-65576789999999999999828998766863688769999999999987898-29998788-999
Q ss_pred HHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHH---HHCCHHHHHHHCCCCCCCCCCCHH
Q ss_conf 99999984--6992576388735699999981880364155435677889997---300024313303663322222379
Q T0636 80 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLA---QVSRDDCVVLANPSNPTGQALSAG 154 (336)
Q Consensus 80 i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~---~~~~~~~i~l~nPnNPTG~~~~~~ 154 (336)
...++.++ +||.|++...++......+...+.+++.++.. |.++++ +..++++|++.++++++|.+.+.+
T Consensus 132 n~~~i~al~~~gd~Vi~d~~~H~s~~~~~~~~~~~~~~~~h~-----d~~~l~~~l~~~~~~~Ivve~~~s~~G~i~~L~ 206 (409)
T 3kki_A 132 NVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMHN-----NCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLA 206 (409)
T ss_dssp HHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECTT-----CHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHH
T ss_pred HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCEEEEECCC-----CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHH
T ss_conf 999999997389889953872587887787428805997899-----989999998625983898579878998754799
Q ss_pred HHHHHHHHCCC-CCCCCCCCCCC-CCCCCHH----HHC-CCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC--
Q ss_conf 99999973787-20252100258-8662003----324-520012023465233434531311788999999733787--
Q T0636 155 ELDQLRQRAGK-LLIDETYVDYS-SFRARGL----AYG-ENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF-- 225 (336)
Q Consensus 155 ~l~~l~~~~~~-~IvDeaY~~f~-~~~~~~l----~~~-~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~-- 225 (336)
++.+++++++. +++||++..+. +..-..+ ... ...+++.||||.||.+| ||+++++++++.++....+
T Consensus 207 ~i~~la~~~ga~livDeah~~g~~G~~g~G~~~~~~~~~~~di~~~tlsKalG~~g---G~v~~~~~~i~~l~~~~~~~~ 283 (409)
T 3kki_A 207 ELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNNEVNRCVPFISYPAI 283 (409)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESSSGGGTHHHHCHHHH
T ss_pred HHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCE---EEEECCHHHHHHHHHHCCCCC
T ss_conf 99999998584302115540466578887631002323333311013566776523---799626058999987265643
Q ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCC---HHHHHHHHHHCCCEE
Q ss_conf 7--87777899999997459999999999999999999999858978616986478865698---899999998769389
Q T0636 226 C--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENAA---GERTLRFLRERGIQV 300 (336)
Q Consensus 226 ~--~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~~---~~~~~~~L~~~gi~v 300 (336)
+ +.+.....++.++|+.-....+.++++.+..+++.+.|+++|+.+ +++++.+.+.+.+ +..+.+.|.++||++
T Consensus 284 ~s~~~~p~~aaa~~aaL~~l~~~~~~r~~l~~~~~~l~~~L~~~G~~i-~~~s~Iv~v~~g~~~~a~~~~~~L~e~GI~v 362 (409)
T 3kki_A 284 FSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLGLTI-RSESQIIGLETGDERNTEKVRDYLESNGVFG 362 (409)
T ss_dssp HSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTTCCC-CCSSSEEEEEEESHHHHHHHHHHHHHTTEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCEEEEEECCHHHHHHHHHHHHHCCCEE
T ss_conf 346778899999999899985288999999999999999999779987-9999979999698899999999999789638
Q ss_pred EECCCCCC---CCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 60778888---874788747---989999999999999842
Q T0636 301 KDAGQFGL---HHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 301 r~~~~fg~---~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
.+...+.. ...||+++. |+||+++++++|+|+.++
T Consensus 363 ~~i~~P~vp~g~~~lR~~~~~~~t~edId~~i~~l~e~l~~ 403 (409)
T 3kki_A 363 SVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp EEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 65799998999725999808889999999999999999963
No 69
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic protozoa, SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.96 E-value=1.5e-27 Score=196.78 Aligned_cols=314 Identities=14% Similarity=0.111 Sum_probs=204.0
Q ss_pred CEECCC-CCCCCCCCHHHHHHHHHHHH-HHHCC-CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCC
Q ss_conf 357357-65488876899999999987-50058-8986189999999984888543886077889999999984--6992
Q T0636 17 AVCLAF-NENPEAVEPRVQAAIAAAAA-RINRY-PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMR 91 (336)
Q Consensus 17 ~i~L~~-Nenp~~p~~~v~~al~~~~~-~~~~Y-pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~ 91 (336)
...++| |+||+|+.|.|++|+.++.. ....| +|+...+||+.||+++|.++++|++|+|++++...++.++ +|+.
T Consensus 13 ~~~~~f~nd~~~g~hP~v~eA~~~a~~~~~~~yg~d~~~~~lr~~ia~~~g~~~~~v~f~~~Gtean~~a~~~~~~~g~~ 92 (359)
T 1svv_A 13 PKPYSFVNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEA 92 (359)
T ss_dssp --CEECSCSCSSCCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCC
T ss_conf 88777566678888999999999886156778789989999999999985999625998386799999999972378884
Q ss_pred EEECCCCCHHHH--HHHHHHCCCEEEECCCCCCCCCHHHHHHHCC--------HHHHHHHCCCCCCCCCCCHHHHHH---
Q ss_conf 576388735699--9999818803641554356778899973000--------243133036633222223799999---
Q T0636 92 FVTAWPGFDGYR--ARIAVSGLRHFEIGLTDDLLLDPNDLAQVSR--------DDCVVLANPSNPTGQALSAGELDQ--- 158 (336)
Q Consensus 92 vii~~P~y~~y~--~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~--------~~~i~l~nPnNPTG~~~~~~~l~~--- 158 (336)
+++..+.+.... ......|..+...+ ..++..|++...+..+ ...+++++++|++|.+++.+++.+
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~i~~ 171 (359)
T 1svv_A 93 VIATQLGHISTHETGAIEATGHKVVTAP-CPDGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISA 171 (359)
T ss_dssp EEEETTSHHHHSSTTHHHHTTCCEEEEC-CTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCCCCCCEEEEEC-CCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 2223444224420134333551377411-444445688999975433204677611321012223333310677777888
Q ss_pred HHHHCCCC-CCCCCCCCCC---CCCCCHHHH--CCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH----HHCCCCCCC
Q ss_conf 99737872-0252100258---866200332--4520012023465233434531311788999999----733787787
Q T0636 159 LRQRAGKL-LIDETYVDYS---SFRARGLAY--GENELVFRSFSKSYGLAGLRLGALFGPSELIAAM----KRKQWFCNV 228 (336)
Q Consensus 159 l~~~~~~~-IvDeaY~~f~---~~~~~~l~~--~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l----~~~~~~~~~ 228 (336)
++++++.+ ++|++|..+. +........ ....+++.+++|.+++++ .++.+......... ......++.
T Consensus 172 l~~~~~~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T 1svv_A 172 SCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFG--EALIILNDALKPNARHLIKQRGALMAK 249 (359)
T ss_dssp HHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSC--EEEEECSGGGCTTHHHHHHHTTCCCTT
T ss_pred HHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCC--CCCCCCCCCCCCHHHHHCCCCCCCCCH
T ss_conf 876641431120001112661166433322455454146303555554543--332234410000012002465676331
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE-CCCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCC
Q ss_conf 77789999999745999999999999999999999985897861-69864788656988999999987693896077888
Q T0636 229 GTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVA-SSEANFVLVENAAGERTLRFLRERGIQVKDAGQFG 307 (336)
Q Consensus 229 ~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~-~s~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg 307 (336)
+.....++...+++ +......++....++++.+.|++.|+++. |+++||++++++. ...+.|.+++..........
T Consensus 250 ~~~~~aa~~~~~~~-~~~~~~~~~~~~~a~~l~~~l~~~g~~~~~p~~~n~v~~~~~~--~~~~~l~~~~~~~~i~~~~~ 326 (359)
T 1svv_A 250 GWLLGIQFEVLMKD-NLFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILEN--TMIAELNNDFDMYTVEPLKD 326 (359)
T ss_dssp THHHHHHHHHHTST-THHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEEH--HHHHHHTTTEECEEEEEETT
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCH--HHHHHHHHHHHHHCCCCCCC
T ss_conf 89999999997300-1567899999997777888886089777369977388785698--99999997124507355479
Q ss_pred CCCEEEEEEC---CHHHHHHHHHHHHHHHHCC
Q ss_conf 8874788747---9899999999999998429
Q T0636 308 LHHHIRISIG---REEDNDRLLAALAEYSDHS 336 (336)
Q Consensus 308 ~~~~iRis~~---~~ee~~~l~~aL~~~~e~~ 336 (336)
..+.+|+|++ |++|+++++++|++++..|
T Consensus 327 ~~~~iR~~~~~~~TeedId~~v~al~~~la~~ 358 (359)
T 1svv_A 327 GTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp TEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 98379998899999999999999999998500
No 70
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics, NPPSFA; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.96 E-value=3e-26 Score=188.34 Aligned_cols=312 Identities=16% Similarity=0.196 Sum_probs=206.1
Q ss_pred CCCCCCEECCCCCCCC----CCCHHHHHHHHHHHHHH--HCC---C--C-----CCHHHHHHHHHHHHCCCHHHEEEECC
Q ss_conf 3665535735765488----87689999999998750--058---8--9-----86189999999984888543886077
Q T0636 12 RAAAQAVCLAFNENPE----AVEPRVQAAIAAAAARI--NRY---P--F-----DAEPRVMRKLAEHFSCPEDNLMLVRG 75 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~----~p~~~v~~al~~~~~~~--~~Y---p--d-----~~~~~Lr~aia~~~~v~~d~I~~t~G 75 (336)
++.++.|.| ||+ ..+|.+++++.+..+.. ..| + | +-+..|++.+|+++|. |.+++|+|
T Consensus 4 ~~~~~~in~----~p~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ld~~~~~~~~~~le~~~a~~~g~--e~~~~~~~ 77 (371)
T 2e7j_A 4 RETKDFINI----DPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC--DVARVTNG 77 (371)
T ss_dssp ----CCEEC----CHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS--SEEEEESS
T ss_pred CCCCCCCCC----CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC--CEEEEECC
T ss_conf 542003257----853237968899999999983477400034667655456716999999999998688--97999895
Q ss_pred HHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC--CCCCCCHHHHHHHCC-------HHHHHHHCCC
Q ss_conf 889999999984--69925763887356999999818803641554--356778899973000-------2431330366
Q T0636 76 IDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQVSR-------DDCVVLANPS 144 (336)
Q Consensus 76 s~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~--~~~~~d~~~l~~~~~-------~~~i~l~nPn 144 (336)
+++++..++.++ +||.|+++.++|......++..|.+++.+|.. .++.+|++++++..+ ++++++++|+
T Consensus 78 ~~~a~~~~~~~~~~~gd~vi~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~lv~~~~~~ 157 (371)
T 2e7j_A 78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPD 157 (371)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 99999999999628999999807741999999998499899645545666777999999998754235783899995898
Q ss_pred CCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC
Q ss_conf 332222237999999973787-2025210025886620033245200120234652334345313117889999997337
Q T0636 145 NPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ 223 (336)
Q Consensus 145 NPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~ 223 (336)
||||.+.+.++|.+++++++. +++|++|.- +.... ......--+++.|++|.+|.+| ++||+++++++++.+.+..
T Consensus 158 ~~~G~~~~l~~i~~~~~~~~~~~~~D~a~~~-g~~~~-~~~~~g~D~~~~S~~K~l~~~g-~~G~l~~~~~~~~~~~~~~ 234 (371)
T 2e7j_A 158 GNYGNLPDVKKIAKVCSEYDVPLLVNGAYAI-GRMPV-SLKEIGADFIVGSGHKSMAASG-PIGVMGMKEEWAEIVLRRS 234 (371)
T ss_dssp TTTCCCCCHHHHHHHHHTTTCCEEEECTTTB-TTBCC-CHHHHTCSEEEEEHHHHSSCCS-SCEEEEECTTTTTTTTCBC
T ss_pred CCCCEEEHHHHHHHHHHCCCCEEEECCCCCC-CEEEE-CCCCCCCCCCCCCCCCCCCCCC-CEEEEEECHHHHHHHHHCC
T ss_conf 9985423199999986311642887354444-42421-1233102445677750137767-8899998779999987415
Q ss_pred CCC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC---CCCCEEEEECC------
Q ss_conf 877----------87777899999997459999999999999999999999858978616---98647886569------
Q T0636 224 WFC----------NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVAS---SEANFVLVENA------ 284 (336)
Q Consensus 224 ~~~----------~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~---s~~~Fi~~~~~------ 284 (336)
..+ ..+........++++......+...+..+..+++.++|+++|+..+. ...++++...+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 314 (371)
T 2e7j_A 235 EKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEIS 314 (371)
T ss_dssp SSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCHHHHH
T ss_conf 66666632221101453799999999999999999999999999999999985699655778887646985262036777
Q ss_pred -----CHHHHHHHHHHCCCEEEECCCCCCCCEEEEE-EC-CHHHHHHHHHHHHHHHHC
Q ss_conf -----8899999998769389607788888747887-47-989999999999999842
Q T0636 285 -----AGERTLRFLRERGIQVKDAGQFGLHHHIRIS-IG-REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 -----~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis-~~-~~ee~~~l~~aL~~~~e~ 335 (336)
........|.++++. +..++....+|++ ++ |+|++++++++|+++.++
T Consensus 315 ~~~~~~~~~~~~~l~~~~~~---~i~~g~~~~~~~~~~~~t~eeid~li~al~eI~~~ 369 (371)
T 2e7j_A 315 KKAKGGRFFLYRELKSRKIH---GIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp HHSSSGGGHHHHHHHHTTEE---CSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHCCCE---EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 77511536889888764853---67137762588845779999999999999999998
No 71
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.96 E-value=6.8e-27 Score=192.50 Aligned_cols=306 Identities=12% Similarity=0.103 Sum_probs=193.6
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHCCC-HHHEEEECCHHHHHHHHHHHH-C
Q ss_conf 366553573576548887689999999998750058-8986189999999984888-543886077889999999984-6
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRY-PFDAEPRVMRKLAEHFSCP-EDNLMLVRGIDECFDRISAEF-S 88 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Y-pd~~~~~Lr~aia~~~~v~-~d~I~~t~Gs~~~i~~~~~~~-~ 88 (336)
.+...++++..+.+.+++...+++++.. .| |..+.+++++.++++++.. .+++++|+|+++++...+.++ +
T Consensus 25 ~g~~~i~~~~gl~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~al~~ 98 (374)
T 2aeu_A 25 KGRDALYDLSGLSGGFLIDEKDKALLNT------YIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILALKP 98 (374)
T ss_dssp TCGGGCEECSSCCCCCCCCHHHHHHHTS------TTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHCC
T ss_pred HCCCHHHHCCCCCCCCCCHHHHHHHHHH------HCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCC
T ss_conf 2631353002788887644899999998------6086333389999999971579852399979849999999983289
Q ss_pred CCCEE-EC-CCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHC-CCCCCCCCCCHHHHHHHHHHC
Q ss_conf 99257-63-8873569999998188036415543567788999730--0024313303-663322222379999999737
Q T0636 89 SMRFV-TA-WPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLAN-PSNPTGQALSAGELDQLRQRA 163 (336)
Q Consensus 89 ~~~vi-i~-~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~n-PnNPTG~~~~~~~l~~l~~~~ 163 (336)
++.++ ++ .|+|+.|...++..|++++..+ |++++++. .+++++++++ ||||||...+.++|.++++++
T Consensus 99 ~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~i~~~tk~i~~~~~~~~~~~~~~~l~~i~~~a~~~ 171 (374)
T 2aeu_A 99 KKVIHYLPELPGHPSIERSCKIVNAKYFESD-------KVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTAKNK 171 (374)
T ss_dssp SEEEEECSSSSCCTHHHHHHHHTTCEEEEES-------CHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCEEECCC-------CHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 9849993378875238878864260577798-------599997327778469998148889832798899999998766
Q ss_pred CCC-CCCCCCCCC--C-CCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCC--CCCCCHHHHHHHH
Q ss_conf 872-025210025--8-866200332452001202346523343453131178899999973378--7787777899999
Q T0636 164 GKL-LIDETYVDY--S-SFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW--FCNVGTLDLHALE 237 (336)
Q Consensus 164 ~~~-IvDeaY~~f--~-~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~--~~~~~~~~~~aa~ 237 (336)
+.+ ++||+|..+ . ......+... --+++.|+||+ ++|+|+||+++++++++.++.... .++.+.+.|.++.
T Consensus 172 ~~~~i~Dea~~~~~~~~~~~~~~~~~~-~di~~~S~sK~--~~g~~~G~~~~~~~li~~~~~~~~~~~~~~~~~~~~aa~ 248 (374)
T 2aeu_A 172 EAIVFVDDASGARVRLLFNQPPALKLG-ADLVVTSTDKL--MEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIY 248 (374)
T ss_dssp TCCEEEECTTHHHHHHHTTCCCHHHHT-CSEEEEETTSS--SSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHH
T ss_pred EEEEEEECCCCCCCCCCCCCCCHHHCC-CEEEEECCCCC--CCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 279999445235311234789979929-64999658523--234521599852677999999974212135389999999
Q ss_pred HHHHHH--HHHHHHHHHHHH----HHHHHHHHHHHC-CC-E-EECC-CCCEEEEECC--------CHHHHH-HHHHHCCC
Q ss_conf 997459--999999999999----999999999858-97-8-6169-8647886569--------889999-99987693
Q T0636 238 AALDND--RAREAHIAKTLA----QRRRVADALRGL-GY-R-VASS-EANFVLVENA--------AGERTL-RFLRERGI 298 (336)
Q Consensus 238 ~~l~~~--~~~~~~~~~~~~----~r~~l~~~l~~l-g~-~-~~~s-~~~Fi~~~~~--------~~~~~~-~~L~~~gi 298 (336)
.+++.. ..+++..++.+. .++.+...+... +. . .... ...|++.... .+.++. ..|.++||
T Consensus 249 ~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~Ll~~~gV 328 (374)
T 2aeu_A 249 RALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGI 328 (374)
T ss_dssp HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHCCE
T ss_conf 99988508999999999999999998631222343677667540005303442366651343323689999999984988
Q ss_pred EEEECCCC-CCCCEEEEEECCHH----HH----HHHHHHHHHHH
Q ss_conf 89607788-88874788747989----99----99999999998
Q T0636 299 QVKDAGQF-GLHHHIRISIGREE----DN----DRLLAALAEYS 333 (336)
Q Consensus 299 ~vr~~~~f-g~~~~iRis~~~~e----e~----~~l~~aL~~~~ 333 (336)
.+.|+..| +..+++|||+++.+ +. +.+.++|++..
T Consensus 329 ~~ip~~~~p~~~~~lRis~~~~~~~~i~~e~l~~ai~~~lk~~f 372 (374)
T 2aeu_A 329 ITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp ECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99977988999885998527455423799999999999999996
No 72
>3f0h_A Aminotransferase; RER070207000802, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.95 E-value=7.5e-24 Score=172.78 Aligned_cols=311 Identities=13% Similarity=0.102 Sum_probs=205.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHCCCHH-H-EEEECCHHHHHHHHHHHH--CCCCEEE
Q ss_conf 576548887689999999998750058898--618999999998488854-3-886077889999999984--6992576
Q T0636 21 AFNENPEAVEPRVQAAIAAAAARINRYPFD--AEPRVMRKLAEHFSCPED-N-LMLVRGIDECFDRISAEF--SSMRFVT 94 (336)
Q Consensus 21 ~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~--~~~~Lr~aia~~~~v~~d-~-I~~t~Gs~~~i~~~~~~~--~~~~vii 94 (336)
+|..-|-..|+.|++|+....-. +|=|+- -..+.++.+.++++.+.+ + |++|.|+++++..++..+ +||+|++
T Consensus 22 ~f~pGP~~~~~~V~~a~~~~~~~-hr~~~f~~~~~~~~~~l~~~~~~~~~~~~i~~~gsgT~a~ea~~~~l~~~gd~vlv 100 (376)
T 3f0h_A 22 NFTVGPVMSSEEVRAIGAEQVPY-FRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLV 100 (376)
T ss_dssp ECSSSSCCCCHHHHHHHTSCCCC-CSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEE
T ss_pred EEECCCCCCCHHHHHHHCCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 85189988869999973777888-78889999999999999999589999759999087999999999984799598999
Q ss_pred CCCCCHHHH--HHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC-CCC
Q ss_conf 388735699--99998188036415543567788999730--0024313303663322222379999999737872-025
Q T0636 95 AWPGFDGYR--ARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKL-LID 169 (336)
Q Consensus 95 ~~P~y~~y~--~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~-IvD 169 (336)
..+++.+.. ..++.+|.+++.++.+.+..+|++++++. .+++++++++++||||.+.+.++|.+++++++.+ ++|
T Consensus 101 ~~~G~f~~~~~~ia~~~G~~v~~i~~~~g~~~d~e~i~~~i~~~~k~v~~~~~~t~TG~~~di~~I~~i~~~~~~~lvvD 180 (376)
T 3f0h_A 101 IDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCD 180 (376)
T ss_dssp EESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEE
T ss_pred EECCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 95988899999999981997446316899877989999872558848998346786540377367676664059558986
Q ss_pred CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCC-CCCCCEEECCCHHHHHHHHHCC-------------------CCCCCC
Q ss_conf 21002588662003324520012023465233-4345313117889999997337-------------------877877
Q T0636 170 ETYVDYSSFRARGLAYGENELVFRSFSKSYGL-AGLRLGALFGPSELIAAMKRKQ-------------------WFCNVG 229 (336)
Q Consensus 170 eaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl-~GlRiG~~i~~~~~i~~l~~~~-------------------~~~~~~ 229 (336)
+++.- +..... .....--+++.|--|.++. || +|+++.+++.+..+.... .+++.+
T Consensus 181 ~v~s~-g~~pi~-~~~~~id~~~~~~~K~l~~p~G--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~T~~ 256 (376)
T 3f0h_A 181 CVSAF-LADPFN-MNECGADVMITGSQKVLACPPG--ISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPA 256 (376)
T ss_dssp CTTTT-TTSCCC-HHHHTCSEEEEETTTTTCCCSS--CEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCC
T ss_pred CCCCC-CCCCCC-CCCEEEEEHHCCCCCEECCCCC--EEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 54335-676543-4322321001136621015896--0578747999997640588764220667654113457777654
Q ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCE---EEEECCCHHHHHHHHH-HCCCEEE
Q ss_conf 778999999974---5999999999999999999999985897861698-647---8865698899999998-7693896
Q T0636 230 TLDLHALEAALD---NDRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANF---VLVENAAGERTLRFLR-ERGIQVK 301 (336)
Q Consensus 230 ~~~~~aa~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~F---i~~~~~~~~~~~~~L~-~~gi~vr 301 (336)
.....+..++|+ +..-++...++.++.++.+.+.|+++|+++++.. ++. +..+..++.++.+.|. ++||.|.
T Consensus 257 ~~~i~al~~aL~~l~~e~g~~~~~~r~~~~~~~l~~~L~~lGl~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~gi~i~ 336 (376)
T 3f0h_A 257 VGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWIC 336 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECE
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEE
T ss_conf 46789999999998860339999999999999999999965986256677870899979999989999999970999997
Q ss_pred ECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHHCC
Q ss_conf 077888887478874---79899999999999998429
Q T0636 302 DAGQFGLHHHIRISI---GREEDNDRLLAALAEYSDHS 336 (336)
Q Consensus 302 ~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e~~ 336 (336)
++...--.+++|||. -+++++++|+++|+++..++
T Consensus 337 ~g~g~~~~~~~RI~~mg~~t~~di~~l~~al~~~l~~n 374 (376)
T 3f0h_A 337 PNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKRN 374 (376)
T ss_dssp ECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 78744479789996788699999999999999999727
No 73
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.94 E-value=3.2e-24 Score=175.18 Aligned_cols=312 Identities=15% Similarity=0.200 Sum_probs=201.3
Q ss_pred CEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--CC-H----------HHHHHHHHHHHCCCHHHEEEECCHHHHHHHH
Q ss_conf 357357654888768999999999875005889--86-1----------8999999998488854388607788999999
Q T0636 17 AVCLAFNENPEAVEPRVQAAIAAAAARINRYPF--DA-E----------PRVMRKLAEHFSCPEDNLMLVRGIDECFDRI 83 (336)
Q Consensus 17 ~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd--~~-~----------~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~ 83 (336)
.|.|+-+-. -|+|+.|++++.+.+...+.|.+ .+ + .+.|+.+|+++|.++++|++|+|+++++.++
T Consensus 23 pIYlD~aat-t~~~~~V~~~~~~~l~~~~~~gNp~s~~h~~~~~a~~~~e~aR~~iA~~lga~~~eI~ft~~~Tealn~~ 101 (423)
T 3lvm_A 23 PIYLDYSAT-TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLA 101 (423)
T ss_dssp SEECBTTTC-CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHH
T ss_pred CEEEECCCC-CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH
T ss_conf 788147334-7899999999999998647756874045099999999999999999998199978199979879999999
Q ss_pred HHHH------CCCCEEECCCCCHHHHH---HHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCC
Q ss_conf 9984------69925763887356999---9998188036415543567788999730--00243133036633222223
Q T0636 84 SAEF------SSMRFVTAWPGFDGYRA---RIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALS 152 (336)
Q Consensus 84 ~~~~------~~~~vii~~P~y~~y~~---~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~ 152 (336)
+..+ +||+|++..+.|+.... .++..|+++..+|.++++.+|++++++. .+|+++.++.++|+||.+.+
T Consensus 102 ~~~~~~~~~~~gd~vi~~~~eh~s~~~~~~~l~~~G~~v~~v~~~~~g~id~~~l~~~i~~~T~lv~~~~~sn~tG~i~p 181 (423)
T 3lvm_A 102 IKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQD 181 (423)
T ss_dssp HHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCC
T ss_pred HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEECCCCCCCCCCC
T ss_conf 98646742689998999557311579999999977978999778999808899999757999679999789888720069
Q ss_pred HHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHC---------
Q ss_conf 7999999973787-202521002588662003324520012023465233434531311788999999733---------
Q T0636 153 AGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRK--------- 222 (336)
Q Consensus 153 ~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~--------- 222 (336)
.++|.+++++++. +++|.+.. .+..+..+....--+++.|..|.+|-+| +|.++..++....+...
T Consensus 182 i~~I~~~~~~~g~~~~vDa~q~--~g~~~id~~~~~~D~~~~s~hK~~Gp~G--~G~l~v~~~~~~~~~p~~~gg~~~~~ 257 (423)
T 3lvm_A 182 IAAIGEMCRARGIIYHVDATQS--VGKLPIDLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMHGGGHERG 257 (423)
T ss_dssp HHHHHHHHHHHTCEEEEECTTT--TTTSCCCTTTSCCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSCSSCTTTT
T ss_pred HHHHHHHHHHCCCEEEEECCCC--CCCCCCCCCCCCCCCCCCCCCEECCCCC--CEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 9999999855398799735424--4873532010114411002300137897--08999836410257775348888677
Q ss_pred CCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEE-CCC---C-C-E-EEEECCCHHHHHHHHH
Q ss_conf 78778777789999999745-999999999999999999999985897861-698---6-4-7-8865698899999998
Q T0636 223 QWFCNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLGYRVA-SSE---A-N-F-VLVENAAGERTLRFLR 294 (336)
Q Consensus 223 ~~~~~~~~~~~~aa~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~-~s~---~-~-F-i~~~~~~~~~~~~~L~ 294 (336)
......+.....+...+++. .........+....+.++.+.|........ ... . . + +.++...++.+. +.
T Consensus 258 ~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~ 335 (423)
T 3lvm_A 258 MRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLI--MA 335 (423)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSCHHHHH--HH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHH--HH
T ss_conf 6579854678988999999999878999999999999999874115663336873457871899974899879999--87
Q ss_pred HCCCEEEECCCC--------------CC-----CCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 769389607788--------------88-----874788747---989999999999999842
Q T0636 295 ERGIQVKDAGQF--------------GL-----HHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 295 ~~gi~vr~~~~f--------------g~-----~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
.++|.++.+..- |. .+++|+|++ |.||+++|+++|++..++
T Consensus 336 ~~~i~v~~g~~c~~~~~~~~~vl~~~G~~~~~~~g~vRiS~~~~nT~edId~~i~aL~~~v~~ 398 (423)
T 3lvm_A 336 LKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR 398 (423)
T ss_dssp TTTEECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEECCHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 289889805011388665049999739983336988999668989999999999999999999
No 74
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural genomics, PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.93 E-value=1.1e-21 Score=158.78 Aligned_cols=314 Identities=17% Similarity=0.164 Sum_probs=212.8
Q ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-----------HHHHHHHHHHHHC-CCHHHEEEECCHHHHHHH
Q ss_conf 5535735765488876899999999987500588986-----------1899999999848-885438860778899999
Q T0636 15 AQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDA-----------EPRVMRKLAEHFS-CPEDNLMLVRGIDECFDR 82 (336)
Q Consensus 15 ~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~-----------~~~Lr~aia~~~~-v~~d~I~~t~Gs~~~i~~ 82 (336)
+..|+|+.+-.- ++|+.|++++.+...+...-|..+ ..+.|+.+|+++| .++++|++|+|+++++..
T Consensus 22 ~~~iYlD~aa~s-~~p~~v~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~~i~f~~~~T~a~n~ 100 (406)
T 1kmj_A 22 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL 100 (406)
T ss_dssp EECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred CCEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
T ss_conf 984997382006-8999999999999986679876303199999999999999999998189984305762657899999
Q ss_pred HHHHH------CCCCEEECCCCCHH----HHHHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCC
Q ss_conf 99984------69925763887356----9999998188036415543567788999730--002431330366332222
Q T0636 83 ISAEF------SSMRFVTAWPGFDG----YRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQA 150 (336)
Q Consensus 83 ~~~~~------~~~~vii~~P~y~~----y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~ 150 (336)
+...+ +||+|++..-.|+. +...++..|+++..+|.+++..+|++.+++. .+|+++.++.-+|.||..
T Consensus 101 ~~~~~~~~~~~~gd~iv~~~~eh~s~~~~~~~~a~~~G~~v~~~p~~~~g~~~~~~~~~~i~~~t~lv~i~~vsn~~G~~ 180 (406)
T 1kmj_A 101 VANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTE 180 (406)
T ss_dssp HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCB
T ss_pred HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEE
T ss_conf 99632012047898899970631226999999999749689998669998488999997457996699997788787505
Q ss_pred CCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHH-HCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHC------
Q ss_conf 237999999973787-2025210025886620033-24520012023465233434531311788999999733------
Q T0636 151 LSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLA-YGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRK------ 222 (336)
Q Consensus 151 ~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~-~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~------ 222 (336)
.+.++|.+++++.+. +++|.+-. .+..+..+. ...+ +++.|.-|.+|-.| +|++...++..+.+.-.
T Consensus 181 ~pv~~i~~~~~~~g~~~~vDa~q~--~g~~~id~~~~~~D-~~~~s~hK~~GP~G--~G~l~v~~~~~~~~~p~~~g~~~ 255 (406)
T 1kmj_A 181 NPLAEMITLAHQHGAKVLVDGAQA--VMHHPVDVQALDCD-FYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGGSM 255 (406)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTT--TTTSCCCHHHHTCS-EEEEEGGGTTSCTT--CEEEEECHHHHHHCCCSSCSTTS
T ss_pred CCHHHHHHHHHHCCCEEEEEECCE--ECEECCCCCCCCCC-EEEEEHHHCCCCCC--CCCEEECCCHHHHCCCCCCCCCC
T ss_conf 758999999987498699975233--01116862227987-89980265369997--61306652136307961168986
Q ss_pred ------------------CCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCC-EEECCC--CCEE
Q ss_conf ------------------78778777789999999745999--999999999999999999985897-861698--6478
Q T0636 223 ------------------QWFCNVGTLDLHALEAALDNDRA--REAHIAKTLAQRRRVADALRGLGY-RVASSE--ANFV 279 (336)
Q Consensus 223 ------------------~~~~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~r~~l~~~l~~lg~-~~~~s~--~~Fi 279 (336)
....+.|.++..+..++++.... ++...++...-.+++.+.++.++. ..+.+. ++-+
T Consensus 256 ~~~~~~~~~~~~~~~~~r~e~GT~n~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~iv 335 (406)
T 1kmj_A 256 IATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVI 335 (406)
T ss_dssp EEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEE
T ss_pred CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEE
T ss_conf 56645344555454256552778764359999999999997094999999999999999876218963525886667579
Q ss_pred --EEECCCHHHHHHHHHHCCCEEEECCC--------CCCCCEEEEEEC---CHHHHHHHHHHHHHHHH
Q ss_conf --86569889999999876938960778--------888874788747---98999999999999984
Q T0636 280 --LVENAAGERTLRFLRERGIQVKDAGQ--------FGLHHHIRISIG---REEDNDRLLAALAEYSD 334 (336)
Q Consensus 280 --~~~~~~~~~~~~~L~~~gi~vr~~~~--------fg~~~~iRis~~---~~ee~~~l~~aL~~~~e 334 (336)
.++..+++++.+.|.++||.++.|+. .+.++++|+|++ |.+|+++|+++|+++.+
T Consensus 336 sf~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~~~~g~vRiS~~~ynt~eDid~l~~~l~~i~k 403 (406)
T 1kmj_A 336 AFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHR 403 (406)
T ss_dssp EEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99738989999999997789599756032256788618997899978898999999999999999998
No 75
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.93 E-value=3.5e-24 Score=174.89 Aligned_cols=313 Identities=14% Similarity=0.144 Sum_probs=199.7
Q ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCC
Q ss_conf 6553573576548887689999999998750058-8986189999999984888543886077889999999984--699
Q T0636 14 AAQAVCLAFNENPEAVEPRVQAAIAAAAARINRY-PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSM 90 (336)
Q Consensus 14 ~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Y-pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~ 90 (336)
+.-.|+|+++ |--+|+|.+++||.++..+-..| |++...+|++++|+++|.+ .++++++++++...++.++ .|+
T Consensus 2 ~~~~~~~~~~-~~~~psp~~~~A~~~a~~g~~~yg~~p~~~~le~~lAe~~G~e--~~~~~~sGt~A~~~ai~a~~~~g~ 78 (347)
T 1jg8_A 2 PHMMIDLRSD-TVTKPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKE--AALFVPSGTMGNQVSIMAHTQRGD 78 (347)
T ss_dssp ---CEECSCG-GGCCCCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHCCTTC
T ss_pred CCCEEECCCC-CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC--CEEEECCHHHHHHHHHHHHHCCCC
T ss_conf 9721775667-3999999999999964547852489869999999999988899--199975889999999998644696
Q ss_pred CEEECCCCCHHHH---HHHHHHCCCEEEECCCCCCCCCHHHHHHHC--------CHHHHHHHCCCCCCC-CCCCHHHHHH
Q ss_conf 2576388735699---999981880364155435677889997300--------024313303663322-2223799999
Q T0636 91 RFVTAWPGFDGYR---ARIAVSGLRHFEIGLTDDLLLDPNDLAQVS--------RDDCVVLANPSNPTG-QALSAGELDQ 158 (336)
Q Consensus 91 ~vii~~P~y~~y~---~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~--------~~~~i~l~nPnNPTG-~~~~~~~l~~ 158 (336)
.+++..+.+..+. ......+..+..++.+. +..|++++.... +++.++++++.+++| ...+.+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 157 (347)
T 1jg8_A 79 EVILEADSHIFWYEVGAMAVLSGVMPHPVPGKN-GAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKE 157 (347)
T ss_dssp EEEEETTCHHHHSSTTHHHHHTCCEEEEECEET-TEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred EEEECCCCCEEEECCCCCCCCCCEEEECCCCCC-CCCCHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCEECCHHHHHH
T ss_conf 486336543032112321023540674556756-7669899999986642215664135522402025862225889999
Q ss_pred ---HHHHCCCC-CCCCCCCCCCCCCC-CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC--CCCCHH
Q ss_conf ---99737872-02521002588662-003324520012023465233434531311788999999733787--787777
Q T0636 159 ---LRQRAGKL-LIDETYVDYSSFRA-RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF--CNVGTL 231 (336)
Q Consensus 159 ---l~~~~~~~-IvDeaY~~f~~~~~-~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~--~~~~~~ 231 (336)
++++++.+ ++||++..+..... .............+++|..|..|.+.|+.+...+.+......+.. ++.+..
T Consensus 158 ~~~~~~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (347)
T 1jg8_A 158 ICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKMLGGGMRQA 237 (347)
T ss_dssp HHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHHTCCCSST
T ss_pred HHHHHHHCEEEEEEECCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCHHH
T ss_conf 99998752279984022102300356566676355320367536777777653132155988877762177777660567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE--EECCCCCEEEEECC----CHHHHHHHHHHCCCEEEECCC
Q ss_conf 899999997459999999999999999999999858978--61698647886569----889999999876938960778
Q T0636 232 DLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYR--VASSEANFVLVENA----AGERTLRFLRERGIQVKDAGQ 305 (336)
Q Consensus 232 ~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~--~~~s~~~Fi~~~~~----~~~~~~~~L~~~gi~vr~~~~ 305 (336)
...++. ............+...+.++++.+.|.+++.. ..++++|++|++.+ ++.++.+.|.++||++++..
T Consensus 238 ~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~l~~~L~~~Gi~v~~~~- 315 (347)
T 1jg8_A 238 GVLAAA-GIIALTKMVDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAVS- 315 (347)
T ss_dssp HHHHHH-HHHHHHHSSTTHHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEEE-
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEECCC-
T ss_conf 888989-998888778889999999987777888617776668987559999817975319999999997899895179-
Q ss_pred CCCCCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 888874788747---989999999999999842
Q T0636 306 FGLHHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 306 fg~~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
+.++|+++. |+||+++++++|+++.++
T Consensus 316 ---~~~iRl~~~~~~t~edid~~i~al~~v~~e 345 (347)
T 1jg8_A 316 ---DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp ---TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf ---898999889999999999999999999997
No 76
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=8.9e-22 Score=159.33 Aligned_cols=312 Identities=13% Similarity=0.103 Sum_probs=205.2
Q ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH----------HHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 55357357654888768999999999875005889861----------89999999984888543886077889999999
Q T0636 15 AQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAE----------PRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 15 ~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~----------~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
++.+.|+..- --++|..|++++.+...+...-|...+ .+.|+.+|+++|+++++|++++++++++.++.
T Consensus 25 ~~~~yld~a~-~~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~e~~R~~ia~llga~~~~i~f~~~~t~~l~~v~ 103 (406)
T 3cai_A 25 DGWVHFDAPA-GMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLA 103 (406)
T ss_dssp SSCEECBGGG-CCCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHH
T ss_pred CCCEEEECCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH
T ss_conf 9938744853-258999999999999986699976637999999999999999999980919555899189579999999
Q ss_pred HHH-----CCCCEEECCCCCHH----HHHHHHHHCCCEEEECCC-CCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCC
Q ss_conf 984-----69925763887356----999999818803641554-3567788999730--00243133036633222223
Q T0636 85 AEF-----SSMRFVTAWPGFDG----YRARIAVSGLRHFEIGLT-DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALS 152 (336)
Q Consensus 85 ~~~-----~~~~vii~~P~y~~----y~~~~~~~g~~~~~vp~~-~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~ 152 (336)
.++ +||+|++....|+. +...++..|..+..++.. +++..|++++++. .+++++.+++++|+||.+.+
T Consensus 104 ~~~~~~~~~gd~Vi~~~~e~~s~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~lv~i~~v~~~tG~~~~ 183 (406)
T 3cai_A 104 EASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTD 183 (406)
T ss_dssp HHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCC
T ss_pred HHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEECC
T ss_conf 87432259989899915700242208999998629558998415655877999999984589529984135567620056
Q ss_pred HHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHH-HCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC-CC----
Q ss_conf 7999999973787-2025210025886620033-245200120234652334345313117889999997337-87----
Q T0636 153 AGELDQLRQRAGK-LLIDETYVDYSSFRARGLA-YGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ-WF---- 225 (336)
Q Consensus 153 ~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~-~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~-~~---- 225 (336)
.++|.+++++++. +++|.+..- +.....+. ...+ +++.|..|.+| |+. -|.++..++.++.+.... .+
T Consensus 184 i~~I~~~a~~~g~~~~vD~aqa~--g~~~id~~~~~~D-~~~~s~hK~~g-p~~-g~l~~~~~~~~~~~~~~~~~~~~~~ 258 (406)
T 3cai_A 184 LRAMTKLVHDVGALVVVDHSAAA--PYRLLDIRETDAD-VVTVNAHAWGG-PPI-GAMVFRDPSVMNSFGSVSTNPYATG 258 (406)
T ss_dssp CHHHHHHHHHTTCEEEEECTTTT--TTCCCCHHHHCCS-EEEEEGGGGTS-CSC-EEEEESCHHHHHTSCCCCSCTTCCG
T ss_pred HHHHHHHHHHCCCCCCEEHHHHC--CCCCCCCCCCCCC-EEEECCCCCCC-CCE-EEEEEECHHHHHHHCCCCCCCCCCC
T ss_conf 99999887534633120623314--6766544443352-79721654158-973-7999975788522202565655678
Q ss_pred ---CC--CCHHHHHHHH-HH---HH---------HHHHH----HHHHHHHHHHHHHHHHHHHHC-CCEEECC---CCCEE
Q ss_conf ---78--7777899999-99---74---------59999----999999999999999999858-9786169---86478
Q T0636 226 ---CN--VGTLDLHALE-AA---LD---------NDRAR----EAHIAKTLAQRRRVADALRGL-GYRVASS---EANFV 279 (336)
Q Consensus 226 ---~~--~~~~~~~aa~-~~---l~---------~~~~~----~~~~~~~~~~r~~l~~~l~~l-g~~~~~s---~~~Fi 279 (336)
+. .......++. ++ +. ..+.+ +...+++..-.+++.+.|+++ +++++.+ .++-+
T Consensus 259 ~~~~e~gt~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~~~~L~~~l~~~L~~i~~v~l~~~~~~r~~~v 338 (406)
T 3cai_A 259 PARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVV 338 (406)
T ss_dssp GGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEE
T ss_conf 54321575441016448999999999779887667887666899999887777778886532256369957855465679
Q ss_pred --EEECCCHHHHHHHHHHCCCEEEECCCC------C---CCCEEEEEEC---CHHHHHHHHHHHHHH
Q ss_conf --865698899999998769389607788------8---8874788747---989999999999999
Q T0636 280 --LVENAAGERTLRFLRERGIQVKDAGQF------G---LHHHIRISIG---REEDNDRLLAALAEY 332 (336)
Q Consensus 280 --~~~~~~~~~~~~~L~~~gi~vr~~~~f------g---~~~~iRis~~---~~ee~~~l~~aL~~~ 332 (336)
.++..+++++.+.|.++||.++.+... | .++.+|+|++ |++|+++|+++|+++
T Consensus 339 sf~~~~~~~~~v~~~L~~~gi~~~~~~~~~~~~~lg~~~~~g~vRiS~~~ynt~~dId~li~aL~~l 405 (406)
T 3cai_A 339 SFAVHKVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp EEEETTBCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred EEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9983893999999999777999992847689997499998988999758989999999999999860
No 77
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, coenzyme A, transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=1.7e-22 Score=163.93 Aligned_cols=317 Identities=13% Similarity=0.160 Sum_probs=208.7
Q ss_pred CCCCCEECCCCCCCCCC--CHHHHHHHHHHHHHH-HCCC--------CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHH
Q ss_conf 66553573576548887--689999999998750-0588--------986189999999984888543886077889999
Q T0636 13 AAAQAVCLAFNENPEAV--EPRVQAAIAAAAARI-NRYP--------FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFD 81 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~p--~~~v~~al~~~~~~~-~~Yp--------d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~ 81 (336)
.+++.||+++| |.+|. -|.|++|+.+.+.+. ..|. .+...+|.+.+++++|. +.+++++|+++++.
T Consensus 43 dG~~~iDf~s~-~~LG~~~hP~V~~A~~~~l~~~~~~~~~sr~~~g~~~~~~~le~~la~~~g~--~~~~~~~sGt~A~~ 119 (401)
T 1fc4_A 43 DGSHVINFCAN-NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM--EDAILYSSCFDANG 119 (401)
T ss_dssp TSCEEEECCCS-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTC--SEEEEESCHHHHHH
T ss_pred CCCEEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC--CEEEEECCHHHHHH
T ss_conf 99899996146-8655659999999999999971977676453558809999999999888699--86999688999999
Q ss_pred HHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH----CCHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 999984--699257638873569999998188036415543567788999730----00243133036633222223799
Q T0636 82 RISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV----SRDDCVVLANPSNPTGQALSAGE 155 (336)
Q Consensus 82 ~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~----~~~~~i~l~nPnNPTG~~~~~~~ 155 (336)
.+++++ +++.|++..++|..+.......+.+...++..+ .....+.+... ....++.+.+|.+.+|......+
T Consensus 120 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (401)
T 1fc4_A 120 GLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANND-MQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKG 198 (401)
T ss_dssp TTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTC-HHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHH
T ss_pred HHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHH
T ss_conf 99998448998899768740789999986289753421487-78899998754541351467751266677575540889
Q ss_pred HHHHHHHCCC-CCCCCCCCC-CCCCCCCH----HHHCCC-HHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC----C
Q ss_conf 9999973787-202521002-58866200----332452-00120234652334345313117889999997337----8
Q T0636 156 LDQLRQRAGK-LLIDETYVD-YSSFRARG----LAYGEN-ELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ----W 224 (336)
Q Consensus 156 l~~l~~~~~~-~IvDeaY~~-f~~~~~~~----l~~~~n-~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~----~ 224 (336)
+.+++++++. +|+||++.. +....... ....+. .++..+++|.++ +...|++..+....+...... .
T Consensus 199 ~~~~~~~~g~~li~Dd~~~~g~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~g~~i~~~~~~~~~~~~~~~~~~~ 276 (401)
T 1fc4_A 199 VCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALG--GASGGYTAARKEVVEWLRQRSRPYLF 276 (401)
T ss_dssp HHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SSSCEEEEECHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHCCEEEEECHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCC--CCCEEEEECHHHHHHHHHCCCCCCCC
T ss_conf 9999998398899734232394557874300102665641178503445567--66302774137788874312223467
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCC---HHHHHHHHHHCCCEEE
Q ss_conf 7787777899999997459999999999999999999999858978616986478865698---8999999987693896
Q T0636 225 FCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENAA---GERTLRFLRERGIQVK 301 (336)
Q Consensus 225 ~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~~---~~~~~~~L~~~gi~vr 301 (336)
.++.+..+..++.+.++..+...+..+..+..++.+.+.+...|+.+.++.++++++.+++ +.++.+.|+++||+|+
T Consensus 277 ~~~~~~~a~~aa~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~i~~~d~~~a~~l~~~l~e~Gv~v~ 356 (401)
T 1fc4_A 277 SNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVT 356 (401)
T ss_dssp SCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTTCCBCCSSSSEEEEEEECHHHHHHHHHHHHHTTEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEE
T ss_conf 87505899999999997676689999999999999997505069622689987899995987899999999997897897
Q ss_pred ECCCCC---CCCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 077888---8874788747---989999999999999842
Q T0636 302 DAGQFG---LHHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 302 ~~~~fg---~~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
++..+. ..+.||++++ |+||+++++++|+++.++
T Consensus 357 ~~~~p~v~~g~~~iR~~~~~~~T~edid~~~~al~~v~~e 396 (401)
T 1fc4_A 357 GFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp EECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 6679877899835999748889999999999999999998
No 78
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-amino-7-ketopelargonate synthase, transferase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.92 E-value=2.1e-22 Score=163.40 Aligned_cols=308 Identities=18% Similarity=0.173 Sum_probs=209.1
Q ss_pred CCCCEECCCCCCCCC--CCHHHHHHHHHHHHHHH--------CC-CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHH
Q ss_conf 655357357654888--76899999999987500--------58-89861899999999848885438860778899999
Q T0636 14 AAQAVCLAFNENPEA--VEPRVQAAIAAAAARIN--------RY-PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDR 82 (336)
Q Consensus 14 ~~~~i~L~~Nenp~~--p~~~v~~al~~~~~~~~--------~Y-pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~ 82 (336)
+++.+++++|- =|| --|.+++++.+++.+.. .| ..+-+.+|.+.+|+++|. +..++++.+..+...
T Consensus 38 g~~~~~f~s~d-YLGL~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~LE~~lA~~~g~--e~al~~~SG~~an~~ 114 (384)
T 1bs0_A 38 DRQYLNFSSND-YLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGY--SRALLFISGFAANQA 114 (384)
T ss_dssp TEEEEECSCCC-TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHH
T ss_pred CEEEEEEECCC-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHCC--CCEEEECCCCHHHHH
T ss_conf 94899987654-135578989999999999983898765320126619999999999998399--838996054035789
Q ss_pred HHHHHC--CCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH-----CCHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 999846--99257638873569999998188036415543567788999730-----00243133036633222223799
Q T0636 83 ISAEFS--SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV-----SRDDCVVLANPSNPTGQALSAGE 155 (336)
Q Consensus 83 ~~~~~~--~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~-----~~~~~i~l~nPnNPTG~~~~~~~ 155 (336)
++.++. ++.+++..-.+......++..+.++..++.. |.+++++. .++++|++....+.+|.+.+.++
T Consensus 115 ~~~al~~~~~~i~~d~~~h~s~~~g~~~~~~~~~~~~hn-----d~~~le~~l~~~~~~~~~iv~e~v~sm~G~i~pl~~ 189 (384)
T 1bs0_A 115 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHN-----DVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE 189 (384)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTT-----CHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred HHHHHHCCCCCEECCCCCHHHHHHHHHCCCCEEEEECCC-----CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHH
T ss_conf 999972578721033200499986352278628995789-----899999875403899769998189888887416999
Q ss_pred HHHHHHHCCC-CCCCCCCCCCC-CCCCCHH---HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC--CC-
Q ss_conf 9999973787-20252100258-8662003---324520012023465233434531311788999999733787--78-
Q T0636 156 LDQLRQRAGK-LLIDETYVDYS-SFRARGL---AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF--CN- 227 (336)
Q Consensus 156 l~~l~~~~~~-~IvDeaY~~f~-~~~~~~l---~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~--~~- 227 (336)
+.+++++++. +++||++.-.. +..-... ......+++.||||.+|.+| |+++++.++++.+.....+ |+
T Consensus 190 l~~l~~~y~~~livDeAh~~gv~G~~g~G~~~~~~~~~~i~~~t~~ka~g~~g---g~v~~~~~~~~~l~~~~~~~~~s~ 266 (384)
T 1bs0_A 190 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYST 266 (384)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSSB
T ss_pred HHHHHHHCCCEEEEECCCEECEECCCCCCCHHHHCCCEEEEECCHHHHCCCCC---CEEECCCHHHHHHHHHCHHHHHCC
T ss_conf 99999975978998343111003688876087708730466435544056666---604345134799987153555434
Q ss_pred -CCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCC---HHHHHHHHHHCCCEEE
Q ss_conf -7777899999997459--999999999999999999999858978616986478865698---8999999987693896
Q T0636 228 -VGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENAA---GERTLRFLRERGIQVK 301 (336)
Q Consensus 228 -~~~~~~~aa~~~l~~~--~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~~---~~~~~~~L~~~gi~vr 301 (336)
.+.+...++.++++.- ....+..+++.+...++.+.|+++|+.+.+++++.+-+...+ +..+.+.|.++||+|.
T Consensus 267 ~~~p~~~aa~~~al~~l~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~~~~s~I~~v~~g~~~~a~~~~~~L~~~Gi~v~ 346 (384)
T 1bs0_A 267 SMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVT 346 (384)
T ss_dssp CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSCCSSBCCEEEESHHHHHHHHHHHHHTTEECC
T ss_pred CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEE
T ss_conf 74389999999999999846056789899999999987677539865799988799997988999999999997790699
Q ss_pred ECCCCCC---CCEEEEEEC---CHHHHHHHHHHHHHH
Q ss_conf 0778888---874788747---989999999999999
Q T0636 302 DAGQFGL---HHHIRISIG---REEDNDRLLAALAEY 332 (336)
Q Consensus 302 ~~~~fg~---~~~iRis~~---~~ee~~~l~~aL~~~ 332 (336)
+...|-. ..-+|+++. |++|+++++++|+..
T Consensus 347 ~i~~PtVp~g~~~lRi~i~a~ht~edId~l~~~L~~~ 383 (384)
T 1bs0_A 347 AIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp EECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 9768978999845999978779999999999999864
No 79
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A
Probab=99.92 E-value=1.9e-22 Score=163.73 Aligned_cols=315 Identities=16% Similarity=0.181 Sum_probs=208.4
Q ss_pred CCCCCEECCCCCCCCCC--CHHHHHHHHHHHHHH-H-----C--CC-CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHH
Q ss_conf 66553573576548887--689999999998750-0-----5--88-986189999999984888543886077889999
Q T0636 13 AAAQAVCLAFNENPEAV--EPRVQAAIAAAAARI-N-----R--YP-FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFD 81 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~p--~~~v~~al~~~~~~~-~-----~--Yp-d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~ 81 (336)
.+++.|.+++| |=||. -|.+++|..+++++. . + |. .+-+.+|.+++|+++|.+ +.+++.+| ..+..
T Consensus 62 ~g~~~~~f~s~-dYLGl~~~p~v~~a~~~a~~~~G~~~~~sR~~~G~~~~h~eLE~~LA~~~G~e-~al~~sSG-~~An~ 138 (427)
T 2w8t_A 62 RGKDTILLGTY-NYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT-GAIVFSTG-YMANL 138 (427)
T ss_dssp TTEEEEECSCC-CTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHH
T ss_pred CCEEEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-EEEEECCH-HHHHH
T ss_conf 99089998766-63354589999999999999838888776707488299999999999987899-69995789-99999
Q ss_pred HHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHH-HHHHC--CHHHHHHHCCCCCCCCCCCHHHH
Q ss_conf 999984--69925763887356999999818803641554356778899-97300--02431330366332222237999
Q T0636 82 RISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPND-LAQVS--RDDCVVLANPSNPTGQALSAGEL 156 (336)
Q Consensus 82 ~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~-l~~~~--~~~~i~l~nPnNPTG~~~~~~~l 156 (336)
.++.++ ++|.|++..-.+......+.+.+..+..++.. |+. +++. +.+.. ..+++++....+.+|.+.+.+++
T Consensus 139 ~ai~al~~~gd~vi~d~~~h~s~~~~~~ls~~~~~~~~h~-D~~-~l~~~l~~~~~~~~~~iv~e~v~s~~G~i~pl~~l 216 (427)
T 2w8t_A 139 GIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHN-SVE-DLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEM 216 (427)
T ss_dssp HHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECTT-CHH-HHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHCCCCCCCCCEEEECCC-CHH-HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHH
T ss_conf 9999997269469962675470221632357616994678-578-99999984434686168724665787766879999
Q ss_pred HHHHHHCCC-CCCCCCCCCCC-CCCCCHHH-----HCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC--C-
Q ss_conf 999973787-20252100258-86620033-----24520012023465233434531311788999999733787--7-
Q T0636 157 DQLRQRAGK-LLIDETYVDYS-SFRARGLA-----YGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF--C- 226 (336)
Q Consensus 157 ~~l~~~~~~-~IvDeaY~~f~-~~~~~~l~-----~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~--~- 226 (336)
.+++++++. +++||++.-.. +..-.... ..+-.+++.|+||.+|.+| |+++++.++++.++..... |
T Consensus 217 ~~l~~~~ga~livDeahs~G~~G~~g~g~~~~~g~~~~~dii~~t~sKa~g~~G---G~v~g~~~~i~~~~~~~~~~~~s 293 (427)
T 2w8t_A 217 VAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKFEAVRLACRPYIFT 293 (427)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTGGGGGGTCHHHHSS
T ss_pred HHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCHHHCCCCC---EEECCCCHHHHHHHHHCCCCEEC
T ss_conf 999997495415433202442467789848882888655468602410062152---36615622567777606762005
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE--CCCCCEEEEECCCHH---HHHHHHHHCCCEE
Q ss_conf -8777789999999745999999999999999999999985897861--698647886569889---9999998769389
Q T0636 227 -NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVA--SSEANFVLVENAAGE---RTLRFLRERGIQV 300 (336)
Q Consensus 227 -~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~--~s~~~Fi~~~~~~~~---~~~~~L~~~gi~v 300 (336)
+.+.....++.++|+.-....+.++++.++.+++.+.|+++|+.+. +++++.+-+.+.+.+ .+++.|.++||++
T Consensus 294 ~~~~p~~~aaa~~aL~~l~~~~~~~~~L~~~~~~l~~~L~~~G~~~~~~~~~s~Iv~v~vg~~~~a~~~~~~L~e~GI~v 373 (427)
T 2w8t_A 294 ASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYV 373 (427)
T ss_dssp CCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTTEEC
T ss_pred CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEE
T ss_conf 78981658999999999864999999999999999999996599768899999879999799999999999998389418
Q ss_pred EECCCCCCC---CEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 607788888---74788747---989999999999999842
Q T0636 301 KDAGQFGLH---HHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 301 r~~~~fg~~---~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
.+...+..+ .-+|+++. |+||+++++++|+++..+
T Consensus 374 ~~i~yPtvp~g~~rlRi~~sa~hT~edId~~v~~l~~v~k~ 414 (427)
T 2w8t_A 374 NMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp EEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 77899988999706999847558999999999999999998
No 80
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, pyridoxal phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.91 E-value=2.9e-21 Score=156.03 Aligned_cols=315 Identities=14% Similarity=0.146 Sum_probs=211.7
Q ss_pred CCCCCEECCCCCCCCCC--CHHHHHHHHHHHHHHH------C--CC-CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHH
Q ss_conf 66553573576548887--6899999999987500------5--88-986189999999984888543886077889999
Q T0636 13 AAAQAVCLAFNENPEAV--EPRVQAAIAAAAARIN------R--YP-FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFD 81 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~p--~~~v~~al~~~~~~~~------~--Yp-d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~ 81 (336)
.+++.+++++| |=||. -|.+++++.+++.+.. + +. .+-+.+|.+.+|+++|. +..++.+.+..+..
T Consensus 41 ~g~~~l~F~sn-dYLGL~~~p~v~~a~~~a~~~~G~~~~~Sr~~~G~~~~~~~lE~~la~~~g~--e~al~~~SG~~An~ 117 (398)
T 3a2b_A 41 DGRRVLMFGSN-SYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNL 117 (398)
T ss_dssp TTEEEEECSCS-CTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHH
T ss_pred CCEEEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHCC--CCEEEEECCHHHHH
T ss_conf 99699998653-4136789999999999999985899875844305859999999999998599--82798613223345
Q ss_pred HHHHHHC--CCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHH-HHHC--CHHHHHHHCCCCCCCCCCCHHHH
Q ss_conf 9999846--99257638873569999998188036415543567788999-7300--02431330366332222237999
Q T0636 82 RISAEFS--SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDL-AQVS--RDDCVVLANPSNPTGQALSAGEL 156 (336)
Q Consensus 82 ~~~~~~~--~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l-~~~~--~~~~i~l~nPnNPTG~~~~~~~l 156 (336)
.++.++. +|.++...-........+...+.+++.++..+. . +.+.. .+.. +.++|+.-...+-+|.+.+..+|
T Consensus 118 ~~i~~l~~~~d~v~~D~~~H~si~~g~~~s~~~~~~~~h~d~-~-~l~~~l~~~~~~~~~~iv~egv~Sm~G~~apL~~l 195 (398)
T 3a2b_A 118 GPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHNNM-E-DLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPEL 195 (398)
T ss_dssp HHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECTTCH-H-HHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHH
T ss_pred HHHHHCCCCCCEEEECHHCCHHHHHHHHHCCCCEEEECCCCH-H-HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHH
T ss_conf 554311567878986100039775026540685356458887-9-99988532012476058713666898876479999
Q ss_pred HHHHHHCCC-CCCCCCCCC--CCCC---CCCHHHHCCC-HHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC--C-
Q ss_conf 999973787-202521002--5886---6200332452-0012023465233434531311788999999733787--7-
Q T0636 157 DQLRQRAGK-LLIDETYVD--YSSF---RARGLAYGEN-ELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF--C- 226 (336)
Q Consensus 157 ~~l~~~~~~-~IvDeaY~~--f~~~---~~~~l~~~~n-~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~--~- 226 (336)
.+|+++++. ++|||++.- ++.. ........++ .+++.||||+||..| |++.++.++++.++....+ |
T Consensus 196 ~~L~~~y~~~LivDeAH~~Gv~G~~G~G~~e~~g~~~~idi~~gtlsKa~g~~G---g~v~g~~~~i~~l~~~~~~~~~s 272 (398)
T 3a2b_A 196 TSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNARSVMFS 272 (398)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHCHHHHSS
T ss_pred HHHHHHHCEEEEEECCCCCCEECCCCCCHHHHHCCCCCCEEEECCCCCCCCEEE---EEEEECHHHHHHHHHCCHHHHHC
T ss_conf 999997294899734110331147886669981898886699821224565145---79982689876767507113314
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHH---HHHHHHHHCCCEEEE
Q ss_conf -8777789999999745999999999999999999999985897861698647886569889---999999876938960
Q T0636 227 -NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENAAGE---RTLRFLRERGIQVKD 302 (336)
Q Consensus 227 -~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~~~~---~~~~~L~~~gi~vr~ 302 (336)
+.+.+...++.++++......+.++++.++.+++.+.|.+.|+.+.+++++.+-+...+.+ .+.+.|.++||++.+
T Consensus 273 ~~l~p~~~~aa~~al~~~~~~~~~~~~L~~n~~~~~~~l~~~g~~~~~~~spI~~v~ig~~~~~~~~~~~L~~~Gi~v~~ 352 (398)
T 3a2b_A 273 ASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDHGFDLGATESPILPIFIRSNEKTFWVTKMLQDDGVFVNP 352 (398)
T ss_dssp BCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHTTCCBCSCCSSEEEEECCCHHHHHHHHHHHHHTTEECEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEE
T ss_conf 78864888999999876204899999999888887754320388868999998999989889999999999978927988
Q ss_pred CCCCCC---CCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 778888---874788747---989999999999999842
Q T0636 303 AGQFGL---HHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 303 ~~~fg~---~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
...|.. ...+|+++. |++|+++++++|.++.++
T Consensus 353 i~~PtVp~g~~~lRi~l~a~hT~~dId~l~~~l~~v~~~ 391 (398)
T 3a2b_A 353 VVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp ECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 889988999806999988779999999999999999998
No 81
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.91 E-value=2.2e-22 Score=163.26 Aligned_cols=302 Identities=11% Similarity=0.149 Sum_probs=197.3
Q ss_pred CCCC-CCH---HHHHHHHHHHHHH---HCCCC-CCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCCCEE
Q ss_conf 4888-768---9999999998750---05889-86189999999984888543886077889999999984---699257
Q T0636 25 NPEA-VEP---RVQAAIAAAAARI---NRYPF-DAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSMRFV 93 (336)
Q Consensus 25 np~~-p~~---~v~~al~~~~~~~---~~Ypd-~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~~vi 93 (336)
.||- .+| .+.+.+...+.++ ..|.- +...+|++++|+++|. +++++++++++++.+++.++ +||+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~lE~~lA~~~g~--~~~i~~~sGt~Al~~al~al~~~~Gd~Vi 80 (373)
T 3frk_A 3 ISFASFKPMHDEIEYEIKFKFEEIYKRNWFILGDEDKKFEQEFADYCNV--NYCIGCGNGLDALHLILKGYDIGFGDEVI 80 (373)
T ss_dssp BCSCCCHHHHHHHHHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHTS--SEEEEESCHHHHHHHHHHHTTCCTTCEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 7877863106889999999999999759951498999999999998695--97999567999999999981789999899
Q ss_pred ECCCCCHHHHHHHHHHCCCEEEECCCCC-CCCCHHHHHHHC--CHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC-CCC
Q ss_conf 6388735699999981880364155435-677889997300--024313303663322222379999999737872-025
Q T0636 94 TAWPGFDGYRARIAVSGLRHFEIGLTDD-LLLDPNDLAQVS--RDDCVVLANPSNPTGQALSAGELDQLRQRAGKL-LID 169 (336)
Q Consensus 94 i~~P~y~~y~~~~~~~g~~~~~vp~~~~-~~~d~~~l~~~~--~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~-IvD 169 (336)
++.++|+.+...+...|.+++.++.+.+ +.+|++++++.. ++++++ |.||+|...+.++|.+++++++.+ |+|
T Consensus 81 ~~~~~~~~~~~a~~~~G~~~~~~~v~~~~~~~d~~~le~~i~~~t~~v~---~~~~~G~~~dl~~l~~ia~~~gi~li~D 157 (373)
T 3frk_A 81 VPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIED 157 (373)
T ss_dssp EETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEE
T ss_pred ECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEEE---CCCCCCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 4897228899999986998999752688677899999754367844773---2555466667999999999729879997
Q ss_pred CCCCCCCCCCCCHH-HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC------------CC--CCHHHHH
Q ss_conf 21002588662003-324520012023465233434531311788999999733787------------78--7777899
Q T0636 170 ETYVDYSSFRARGL-AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF------------CN--VGTLDLH 234 (336)
Q Consensus 170 eaY~~f~~~~~~~l-~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~------------~~--~~~~~~~ 234 (336)
++|.-......... ...+-.++..+.+|.++.+|..-+++..++++++.++..+.. ++ ++.+...
T Consensus 158 ~a~a~g~~~~~~~~~~~~d~~~~s~~~~K~~~~~g~gG~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~aa 237 (373)
T 3frk_A 158 AAQAHGSLYKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAG 237 (373)
T ss_dssp CTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHH
T ss_pred CHHHHCCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHH
T ss_conf 60120362588101356647999655984877777726998376999999999852688876322014767786789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE-ECCCCC-----EEEEECCCHHHHHHHHHHCCCEEEECCCC--
Q ss_conf 9999974599999999999999999999998589786-169864-----78865698899999998769389607788--
Q T0636 235 ALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRV-ASSEAN-----FVLVENAAGERTLRFLRERGIQVKDAGQF-- 306 (336)
Q Consensus 235 aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~-~~s~~~-----Fi~~~~~~~~~~~~~L~~~gi~vr~~~~f-- 306 (336)
.+...|+ .+++..++.++..+++.+.|+.++... .++.+. .+.+...+.+++.+.|.++||.++.+...
T Consensus 238 ~~~~~L~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~ 314 (373)
T 3frk_A 238 FLRVKLK---YLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSEKRDELQKYLNNNGIGTLIHYPIPI 314 (373)
T ss_dssp HHHHHHH---THHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEESSHHHHHHHHHHTTBCCBCSCSSCG
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 9999998---7999999999999999985768992236779988434589872365899999999967998862068752
Q ss_pred ---------CC------------CCEEEEEEC---CHHHHHHHHHHHHHHHH
Q ss_conf ---------88------------874788747---98999999999999984
Q T0636 307 ---------GL------------HHHIRISIG---REEDNDRLLAALAEYSD 334 (336)
Q Consensus 307 ---------g~------------~~~iRis~~---~~ee~~~l~~aL~~~~e 334 (336)
+. .+.+|+.+. +++|+++++++|++|.-
T Consensus 315 ~~~~~~~~~~~~~~~~~~a~~l~~~~l~LP~~~~lt~edid~iie~i~~~~~ 366 (373)
T 3frk_A 315 HLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp GGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred CCCHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 1075667459988998789999837498248999999999999999999985
No 82
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii OT3}
Probab=99.91 E-value=1.7e-20 Score=151.01 Aligned_cols=310 Identities=15% Similarity=0.200 Sum_probs=204.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCC-CC--CCHHHHHHHHHHHHCCCHHHE-EEECCHHHHHHHHHHHH--CCCCEE
Q ss_conf 3576548887689999999998750058-89--861899999999848885438-86077889999999984--699257
Q T0636 20 LAFNENPEAVEPRVQAAIAAAAARINRY-PF--DAEPRVMRKLAEHFSCPEDNL-MLVRGIDECFDRISAEF--SSMRFV 93 (336)
Q Consensus 20 L~~Nenp~~p~~~v~~al~~~~~~~~~Y-pd--~~~~~Lr~aia~~~~v~~d~I-~~t~Gs~~~i~~~~~~~--~~~~vi 93 (336)
+.+|.-|-+.+|.|++||.... ++.+ ++ .-..+.|+.+++.+|++++++ +++.|+++++..++..+ +||+++
T Consensus 22 ~lf~pGP~~v~~~V~~am~~~~--~~hr~~~f~~~~~~~r~~l~~~l~~~~~~~ii~~~sgT~~~~a~i~~l~~~g~~vl 99 (386)
T 2dr1_A 22 KLFTAGPVACFPEVLEIMKVQM--FSHRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVL 99 (386)
T ss_dssp EECCSSSCCCCHHHHHHTTSCC--CCTTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEE
T ss_pred CCCCCCCCCCCHHHHHHHCCCC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEE
T ss_conf 7873899488799999717657--88799899999999999999995979998899958589999999973022687458
Q ss_pred ECCCCCHH--HHHHHHHHCCCEEEECCCCCCCCCHHHHHHH----CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-C
Q ss_conf 63887356--9999998188036415543567788999730----002431330366332222237999999973787-2
Q T0636 94 TAWPGFDG--YRARIAVSGLRHFEIGLTDDLLLDPNDLAQV----SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-L 166 (336)
Q Consensus 94 i~~P~y~~--y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~----~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~ 166 (336)
+...++.. +...++..|..+..++.+++..++++.+++. .+++++.++..+|.||.+.+.++|.+++++++. +
T Consensus 100 v~~~g~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~t~tG~~~~i~~i~~~~~~~g~~~ 179 (386)
T 2dr1_A 100 VTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLV 179 (386)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEE
T ss_pred EEECHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCEEE
T ss_conf 85101211322121100122101234454433221100122112432000388753123555402498988765233179
Q ss_pred CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCC-CCCCCEEECCCHHHHHHHHH--------------------CCCC
Q ss_conf 02521002588662003324520012023465233-43453131178899999973--------------------3787
Q T0636 167 LIDETYVDYSSFRARGLAYGENELVFRSFSKSYGL-AGLRLGALFGPSELIAAMKR--------------------KQWF 225 (336)
Q Consensus 167 IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl-~GlRiG~~i~~~~~i~~l~~--------------------~~~~ 225 (336)
+||.+.. ++..+ ......+=-+++.|--|.+|. +| +|+++.+++.++.... ...+
T Consensus 180 ~vDa~qs-~g~~p-id~~~~~vD~~~~s~~K~l~~p~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (386)
T 2dr1_A 180 FVDAVSA-MGGAD-IKFDKWGLDVVFSSSQKAFGVPPG--LAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTP 255 (386)
T ss_dssp EEECTTT-BTTBC-CCTTTTTCSEEEEETTSTTCCCSS--CEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCS
T ss_pred EEECCCC-CCCCC-CCCCCCCCCEEECCCCCEECCCCC--EEEEEEEHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCC
T ss_conf 9860102-47566-433345641663144412307996--6999862555642023467754344412204443332345
Q ss_pred CCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC---C-EEEE---ECCCHHHHHHHHHH
Q ss_conf 78777789999999745---9999999999999999999999858978616986---4-7886---56988999999987
Q T0636 226 CNVGTLDLHALEAALDN---DRAREAHIAKTLAQRRRVADALRGLGYRVASSEA---N-FVLV---ENAAGERTLRFLRE 295 (336)
Q Consensus 226 ~~~~~~~~~aa~~~l~~---~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~---~-Fi~~---~~~~~~~~~~~L~~ 295 (336)
++.+.....+...+++. ........++....+..+.+.++.+|+..+...+ + -+.+ +..+++++.+.|.+
T Consensus 256 ~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~v~~~~~p~g~~~~~l~~~L~~ 335 (386)
T 2dr1_A 256 STPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGIKGDEVYEAMRK 335 (386)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 56780566678999999997656777899999875557776531300003676654981799968899999999999997
Q ss_pred CCCEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 6938960778888874788747---989999999999999842
Q T0636 296 RGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 296 ~gi~vr~~~~fg~~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
+||.+.+|...-..+.+|||+. +++|+++++++|+++.++
T Consensus 336 ~gi~i~~G~~~~~~~~iRis~~~~~t~edi~~lv~~l~~~l~~ 378 (386)
T 2dr1_A 336 RGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp TTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8949970766447987998687749999999999999999999
No 83
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.90 E-value=7.4e-21 Score=153.38 Aligned_cols=318 Identities=14% Similarity=0.134 Sum_probs=200.9
Q ss_pred CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH----------HHHHHHHHHHHCCCHHHEEEECCHHHHHH
Q ss_conf 36655357357654888768999999999875005889861----------89999999984888543886077889999
Q T0636 12 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAE----------PRVMRKLAEHFSCPEDNLMLVRGIDECFD 81 (336)
Q Consensus 12 ~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~~----------~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~ 81 (336)
.++++-|+|+.+-.- |+|+.+++++.+...+...=|.+.+ .+.|+.+|+++|.++++|++|+|+++++.
T Consensus 14 ~~~~~~IYlD~aatt-~~~~~v~~a~~~~~~~~~~Np~s~~~~~~~a~~~ie~aR~~ia~~lga~~~eIvft~~aTea~n 92 (432)
T 3a9z_A 14 SPPNRKVYMDYNATT-PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNN 92 (432)
T ss_dssp ----CCEECBTTTCC-CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHH
T ss_pred CCCCCEEEEECHHCC-CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHH
T ss_conf 999990982270217-1999999999999987379976421999999999999999999981999786899088799999
Q ss_pred HHHHHH-----------------------CCCCEEECCCCCHHH----HHHHHHHCCCEEEECCC-CCCCCCHHHHHHH-
Q ss_conf 999984-----------------------699257638873569----99999818803641554-3567788999730-
Q T0636 82 RISAEF-----------------------SSMRFVTAWPGFDGY----RARIAVSGLRHFEIGLT-DDLLLDPNDLAQV- 132 (336)
Q Consensus 82 ~~~~~~-----------------------~~~~vii~~P~y~~y----~~~~~~~g~~~~~vp~~-~~~~~d~~~l~~~- 132 (336)
+++..+ .+++|++..-.++.- ....+..|.++..+|.. .++.+|++.+++.
T Consensus 93 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~s~~Eh~s~~~~~~~~~~~~g~~v~~~~~~~~~g~id~~~l~~~i 172 (432)
T 3a9z_A 93 LVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAV 172 (432)
T ss_dssp HHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHC
T ss_conf 99999999875402434431000033237888799815532055579999986287399975643788828799999736
Q ss_pred -CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHC-----------CCCCCCCCCCCCCCCCCCHHH-HCCCHHHHHHHHHHH
Q ss_conf -0024313303663322222379999999737-----------872025210025886620033-245200120234652
Q T0636 133 -SRDDCVVLANPSNPTGQALSAGELDQLRQRA-----------GKLLIDETYVDYSSFRARGLA-YGENELVFRSFSKSY 199 (336)
Q Consensus 133 -~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~-----------~~~IvDeaY~~f~~~~~~~l~-~~~n~iv~~S~SK~~ 199 (336)
.+|+++.++..+|.||...+.++|.++++.. .++++|.+.. .+..+..+. ...+.+ +-|.-|.+
T Consensus 173 ~~~t~lv~~~~vsn~tG~~~pl~~I~~l~~~~~~~~~~~~~~gi~~~vDaaq~--~g~~~~d~~~~~~D~~-~~s~hK~~ 249 (432)
T 3a9z_A 173 RPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQA--LGKRRVDVEDLGVDFL-TIVGHKFY 249 (432)
T ss_dssp CTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTT--TTTSCCCHHHHCCSEE-EEEGGGTT
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHH--CCCCCCCHHHHCCCEE-EECCCEEC
T ss_conf 89952899866887876167999999999876555665068852899750332--5875657789089889-81165534
Q ss_pred CCCCCCCEEECCCHHHHHHHH---------HCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-C
Q ss_conf 334345313117889999997---------33787787777899999997459-999999999999999999999858-9
Q T0636 200 GLAGLRLGALFGPSELIAAMK---------RKQWFCNVGTLDLHALEAALDND-RAREAHIAKTLAQRRRVADALRGL-G 268 (336)
Q Consensus 200 gl~GlRiG~~i~~~~~i~~l~---------~~~~~~~~~~~~~~aa~~~l~~~-~~~~~~~~~~~~~r~~l~~~l~~l-g 268 (336)
| ||. .|..+........+. ....+.+.|.++..+..++++-. ..++....++...+.++.+.|+.. +
T Consensus 250 g-p~~-~gl~~~~~~~~~~l~p~~~~g~~~~~~e~GT~n~~~~~~l~~Al~~~~~g~~~i~~~~~~l~~~l~~~L~~~~~ 327 (432)
T 3a9z_A 250 G-PRI-GALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFG 327 (432)
T ss_dssp C-CSC-EEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred C-CCC-EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 8-982-49999711010457885668876677478885588999999999999988999999999999999999871469
Q ss_pred CEEE-----CCC---CCE--EEEECCCHHHHHHHHHHCCCEEEECCC---------------CCC-----CCEEEEEEC-
Q ss_conf 7861-----698---647--886569889999999876938960778---------------888-----874788747-
Q T0636 269 YRVA-----SSE---ANF--VLVENAAGERTLRFLRERGIQVKDAGQ---------------FGL-----HHHIRISIG- 317 (336)
Q Consensus 269 ~~~~-----~s~---~~F--i~~~~~~~~~~~~~L~~~gi~vr~~~~---------------fg~-----~~~iRis~~- 317 (336)
..++ +.. .+- +.++..+++.+...|..+||.++.|.. .|. .+.||+|++
T Consensus 328 ~~i~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~l~~~gI~v~~G~aC~~~~~~~~s~vL~~~g~~~~~~~g~vRvS~~~ 407 (432)
T 3a9z_A 328 KRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGR 407 (432)
T ss_dssp GGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCT
T ss_pred CEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEECCHHHCCCCCCCCCHHHHHCCCCHHHHCCEEEEECCC
T ss_conf 58995688865446587799996799989999983529979977132178998876699997599877819789997689
Q ss_pred --CHHHHHHHHHHHHHHHHC
Q ss_conf --989999999999999842
Q T0636 318 --REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 318 --~~ee~~~l~~aL~~~~e~ 335 (336)
|.+|+++|+++|++..++
T Consensus 408 ~nt~~dId~li~al~~~v~~ 427 (432)
T 3a9z_A 408 STTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998
No 84
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.90 E-value=3.1e-19 Score=142.91 Aligned_cols=315 Identities=17% Similarity=0.177 Sum_probs=209.0
Q ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-H----------HHHHHHHHHHHCCC-HHHEEEECCHHHHHHH
Q ss_conf 5535735765488876899999999987500588986-1----------89999999984888-5438860778899999
Q T0636 15 AQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDA-E----------PRVMRKLAEHFSCP-EDNLMLVRGIDECFDR 82 (336)
Q Consensus 15 ~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~-~----------~~Lr~aia~~~~v~-~d~I~~t~Gs~~~i~~ 82 (336)
++.|+|+-+-- =++|+.+++++.+...+...=|.++ + .+.|+.+|+++|.+ ++.+++++++++++.+
T Consensus 27 ~~~iYlD~aa~-~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~aR~~ia~~lga~~~~~ii~~~~tt~a~~~ 105 (420)
T 1t3i_A 27 HPLVYLDNAAT-SQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINL 105 (420)
T ss_dssp EECEECBTTTC-CCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred CCEEEEECCCC-CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH
T ss_conf 98598108400-67999999999999986689876225199999999999999999997097984356985261789999
Q ss_pred HHHHH------CCCCEEECCCCCHH----HHHHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCC
Q ss_conf 99984------69925763887356----9999998188036415543567788999730--002431330366332222
Q T0636 83 ISAEF------SSMRFVTAWPGFDG----YRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQA 150 (336)
Q Consensus 83 ~~~~~------~~~~vii~~P~y~~----y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~ 150 (336)
+...+ +|++|++..=.|+. ....++..|..+..+|.+.+...+.+++... .+++++.++.=+|-||..
T Consensus 106 ~~~~~~~~~~~~g~~i~~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~~~~G~~ 185 (420)
T 1t3i_A 106 VAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCV 185 (420)
T ss_dssp HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBB
T ss_pred HHHHCCCCCCCCCCEEEECCCCCCCEEEHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCC
T ss_conf 98640001268998677103555010110433220268257753121223104988744027895699997124565435
Q ss_pred CCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC------
Q ss_conf 237999999973787-2025210025886620033245200120234652334345313117889999997337------
Q T0636 151 LSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ------ 223 (336)
Q Consensus 151 ~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~------ 223 (336)
.+.++|.++++.++. +++|-+- ..+..+..+...+--+++.|.-|.+|-+| +|+++..++....+.-..
T Consensus 186 ~p~~~i~~~~~~~g~~~~vDaaq--~~g~~~ld~~~~~~D~~~~s~hK~~gp~G--~g~l~v~~~~~~~~~p~~~g~~~~ 261 (420)
T 1t3i_A 186 NPAEEIAQLAHQAGAKVLVDACQ--SAPHYPLDVQLIDCDWLVASGHKMCAPTG--IGFLYGKEEILEAMPPFFGGGEMI 261 (420)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTT--TTTTSCCCHHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHSCCCSCSTTSE
T ss_pred CHHHHHHHHHHCCCCCEEEEEEE--EEEEEEECCCCCCCCEEECCCCCCCCCCC--CCCEEEEHHHHHCCCCCCCCCCCC
T ss_conf 80888888875058636875211--30067642224687546423544558985--324001001342288532786555
Q ss_pred -----------------CCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHC-CCEEECC------CCC
Q ss_conf -----------------8778777789999999745999--9999999999999999999858-9786169------864
Q T0636 224 -----------------WFCNVGTLDLHALEAALDNDRA--REAHIAKTLAQRRRVADALRGL-GYRVASS------EAN 277 (336)
Q Consensus 224 -----------------~~~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~r~~l~~~l~~l-g~~~~~s------~~~ 277 (336)
...+.+.++..++..+++--.. +++..++.....+++.+.++++ ++..+.+ .+.
T Consensus 262 ~~~~~~~~~~~~~~~r~e~GT~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 341 (420)
T 1t3i_A 262 AEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAA 341 (420)
T ss_dssp EEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCS
T ss_pred CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE
T ss_conf 55445555467743432478578999999999999999708799999999888999876400211134357754467541
Q ss_pred EEE--EECCCHHHHHHHHHHCCCEEEECCC--------CCCCCEEEEEEC---CHHHHHHHHHHHHHHHH
Q ss_conf 788--6569889999999876938960778--------888874788747---98999999999999984
Q T0636 278 FVL--VENAAGERTLRFLRERGIQVKDAGQ--------FGLHHHIRISIG---REEDNDRLLAALAEYSD 334 (336)
Q Consensus 278 Fi~--~~~~~~~~~~~~L~~~gi~vr~~~~--------fg~~~~iRis~~---~~ee~~~l~~aL~~~~e 334 (336)
-+- ++..+++++.+.|.++||.++.|.. ++.++++|+|++ |.+|.++|+++|++..+
T Consensus 342 iv~f~~~~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRvS~~~ynt~~Did~lv~~L~~~l~ 411 (420)
T 1t3i_A 342 LASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIR 411 (420)
T ss_dssp EEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8999969989999999996699699667432558788606896299979899999999999999999999
No 85
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.90 E-value=1.7e-20 Score=151.03 Aligned_cols=312 Identities=17% Similarity=0.125 Sum_probs=186.8
Q ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHH-HHHCC-CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCC
Q ss_conf 5535735765488876899999999987-50058-8986189999999984888543886077889999999984--699
Q T0636 15 AQAVCLAFNENPEAVEPRVQAAIAAAAA-RINRY-PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSM 90 (336)
Q Consensus 15 ~~~i~L~~Nenp~~p~~~v~~al~~~~~-~~~~Y-pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~ 90 (336)
+..++.++ .|+.|+.|.|++||.++.. +...| +++...+||+.+|+++|.+ ..+++|+|++++...++.++ .|+
T Consensus 7 ~~~~~f~s-dn~~~~~P~Vi~A~~~~~~~~~~~yg~~~~~~~l~~~la~~~g~~-~~~~ft~sGteAn~~ai~~~~~~g~ 84 (356)
T 1v72_A 7 PPALGFSS-DNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERD-VEVFLVPTGTAANALCLSAMTPPWG 84 (356)
T ss_dssp CCCCBCSC-GGGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHTSC-CEEEEESCHHHHHHHHHHTSCCTTE
T ss_pred CCEEECCC-CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC-CEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf 87000106-888777999999999986648776688999999999999876999-6799899499999999999985388
Q ss_pred CEEECCCCCHHHH---HHHHHHCCCEEEECCCCCCCCCHHHHHHHCC--------HH-HHHHHCCCCCCCCCCCHHH---
Q ss_conf 2576388735699---9999818803641554356778899973000--------24-3133036633222223799---
Q T0636 91 RFVTAWPGFDGYR---ARIAVSGLRHFEIGLTDDLLLDPNDLAQVSR--------DD-CVVLANPSNPTGQALSAGE--- 155 (336)
Q Consensus 91 ~vii~~P~y~~y~---~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~--------~~-~i~l~nPnNPTG~~~~~~~--- 155 (336)
.+++..+.+..+. ......+..+..+....+...+++.+..... .. .++.+.++++++.+.+..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 164 (356)
T 1v72_A 85 NIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEA 164 (356)
T ss_dssp EEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHH
T ss_pred CCCCCCCCCEEEECCHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHH
T ss_conf 65435544237521122322122001012466434466777532320123233454413431112211232144787654
Q ss_pred HHHHHHHCCC-CCCCCCCCCCCC----CCC--CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHH---CCCC
Q ss_conf 9999973787-202521002588----662--00332452001202346523343453131178899999973---3787
Q T0636 156 LDQLRQRAGK-LLIDETYVDYSS----FRA--RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKR---KQWF 225 (336)
Q Consensus 156 l~~l~~~~~~-~IvDeaY~~f~~----~~~--~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~---~~~~ 225 (336)
+.+++++++. +++|+++..+.. ... ........ . .+++|.-+..+...++............. ....
T Consensus 165 i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (356)
T 1v72_A 165 IGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVD-A--LSFGATKNGVLAAEAIVLFNTSLATEMSYRRKRAGH 241 (356)
T ss_dssp HHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCC-E--EEECCGGGTCSSCEEEEESSGGGHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC-C--EEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf 5667776547776401000010233234543211344532-0--230456565314665432206766542201345445
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-CCCCCEEEEECCCHHHHHHHHHHCCCEEEEC
Q ss_conf 787777899999997459999999999999999999999858-97861-6986478865698899999998769389607
Q T0636 226 CNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEANFVLVENAAGERTLRFLRERGIQVKDA 303 (336)
Q Consensus 226 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~-~s~~~Fi~~~~~~~~~~~~~L~~~gi~vr~~ 303 (336)
.........++....................++++.+.++++ |+++. |+++|+++++++. .+.+.|+++|+.|..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~v~~~~~~--~~~~~L~~~Gi~v~~~ 319 (356)
T 1v72_A 242 LSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLDS--AMIDALLKAGFGFYHD 319 (356)
T ss_dssp CCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEECH--HHHHHHHHTTCBCBCS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCH--HHHHHHHHCCCCCCCC
T ss_conf 54411777766677777666543022101367888988763499176058974089998599--9999999779973133
Q ss_pred CCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 78888874788747---989999999999999842
Q T0636 304 GQFGLHHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 304 ~~fg~~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
. + .+++||+|++ |+||+++++++|++..|+
T Consensus 320 ~-~-~~~~iR~~~~~~~t~edId~~l~~lk~~~~~ 352 (356)
T 1v72_A 320 R-W-GPNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp S-S-STTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred C-C-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7-8-9997999899989899999999999999999
No 86
>3ffr_A Phosphoserine aminotransferase SERC; YP_677612.1, structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.88 E-value=1.7e-19 Score=144.50 Aligned_cols=308 Identities=14% Similarity=0.140 Sum_probs=204.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCC------CHHHHHHHHHHHHCCCHH-HEEEECCHHHHHHHHHHHHCCCC
Q ss_conf 357654888768999999999875005-8898------618999999998488854-38860778899999999846992
Q T0636 20 LAFNENPEAVEPRVQAAIAAAAARINR-YPFD------AEPRVMRKLAEHFSCPED-NLMLVRGIDECFDRISAEFSSMR 91 (336)
Q Consensus 20 L~~Nenp~~p~~~v~~al~~~~~~~~~-Ypd~------~~~~Lr~aia~~~~v~~d-~I~~t~Gs~~~i~~~~~~~~~~~ 91 (336)
+.|+.-|-+.||.|++++.+...+-.. ..+. -..+.|+.+++.++.+.+ .|++|.|+++++.+++..+.++.
T Consensus 6 ~~f~pGP~~~~~~V~~a~~~~~~~~~~~~~HRs~~f~~i~~~~r~~l~~ll~~~~~~~iif~~~gT~a~~~~~~~l~~~~ 85 (362)
T 3ffr_A 6 IYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEKK 85 (362)
T ss_dssp EEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSSE
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCC
T ss_conf 41017992889999999999877448987777889999999999999999679999789995876999999997200255
Q ss_pred EEECCCCCHHH--HHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHC-C-CCC
Q ss_conf 57638873569--9999981880364155435677889997300024313303663322222379999999737-8-720
Q T0636 92 FVTAWPGFDGY--RARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRA-G-KLL 167 (336)
Q Consensus 92 vii~~P~y~~y--~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~-~-~~I 167 (336)
+++...+.... ...++..|..+..+..+.+..++++++....+++++.++.-+|.||...+.++|.++++++ + +++
T Consensus 86 ~~~i~~g~~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~t~tG~~~pi~~I~~~~~k~~~~l~~ 165 (362)
T 3ffr_A 86 SFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADITVPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIF 165 (362)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCCCCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEE
T ss_pred EEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCEEECHHHHHHHHHCCCCCEEE
T ss_conf 05884681378999999751850048626767546876752377876588853458765463315441111025782475
Q ss_pred CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCC-CCCCCEEECCCHHHHHHHHHCC-----------------------
Q ss_conf 2521002588662003324520012023465233-4345313117889999997337-----------------------
Q T0636 168 IDETYVDYSSFRARGLAYGENELVFRSFSKSYGL-AGLRLGALFGPSELIAAMKRKQ----------------------- 223 (336)
Q Consensus 168 vDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl-~GlRiG~~i~~~~~i~~l~~~~----------------------- 223 (336)
+|.+- .++..... .... +++ +-|--|.++. +| +|+++.+++.++.+....
T Consensus 166 vDa~q-s~g~~~iD-~~~i-D~~-~~s~~K~l~~P~G--~g~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (362)
T 3ffr_A 166 VDAVS-SLPYPKFD-WTKI-DSV-FFSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQ 239 (362)
T ss_dssp EECTT-TTTSSCCC-TTSC-SEE-EEETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTC
T ss_pred ECCCC-CCCCCCCC-CHHC-CEE-EECCCCCCCCCCC--EEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 25654-43434532-0115-435-7236655668986--24789879999754312689876014466789998653157
Q ss_pred CCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCEEEC-------CCCCEEEEECCCHHHHHHHHH
Q ss_conf 877877778999999974599--99999999999999999999858978616-------986478865698899999998
Q T0636 224 WFCNVGTLDLHALEAALDNDR--AREAHIAKTLAQRRRVADALRGLGYRVAS-------SEANFVLVENAAGERTLRFLR 294 (336)
Q Consensus 224 ~~~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~r~~l~~~l~~lg~~~~~-------s~~~Fi~~~~~~~~~~~~~L~ 294 (336)
.+++-+..+..+..++++.-. -++...++..+..+.+.+.++++++..+. +-+++.+.+..+...+...|.
T Consensus 240 ~~~Tp~~~~i~~l~~al~~~~~~g~e~i~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~l~ 319 (362)
T 3ffr_A 240 TPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTMLPGEINKILE 319 (362)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESSCHHHHHHHHG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 77575799999999999988763622589999999999999999688911377882017668998999989899999999
Q ss_pred HCCCEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHH
Q ss_conf 76938960778888874788747---9899999999999998
Q T0636 295 ERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYS 333 (336)
Q Consensus 295 ~~gi~vr~~~~fg~~~~iRis~~---~~ee~~~l~~aL~~~~ 333 (336)
++||.++.|...-..+.+|||.. |.|++++|+++|+|.+
T Consensus 320 ~~~i~i~~g~g~~~~~~~Ris~~~~~t~edI~~lv~alke~l 361 (362)
T 3ffr_A 320 PFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp GGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 689652148856689899887589999999999999999974
No 87
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), structural genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.85 E-value=3.7e-18 Score=135.89 Aligned_cols=302 Identities=12% Similarity=0.102 Sum_probs=194.3
Q ss_pred CCHHHHHHHHHHHHHHHCC-CC--CCH----HHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--------------
Q ss_conf 7689999999998750058-89--861----89999999984888543886077889999999984--------------
Q T0636 29 VEPRVQAAIAAAAARINRY-PF--DAE----PRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-------------- 87 (336)
Q Consensus 29 p~~~v~~al~~~~~~~~~Y-pd--~~~----~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-------------- 87 (336)
++|.+.+++...... |.. |+ ++. .++++.+|+.+|.+.....+|+|++++..+.+.+.
T Consensus 42 ~~~~a~~~~~~~~~~-n~~~~~~~p~~~~le~~v~~~la~l~g~~~a~g~ftsGgT~an~~al~~ar~~~~~~~~~~~~~ 120 (397)
T 3f9t_A 42 VLPITRKIVDIFLET-NLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSK 120 (397)
T ss_dssp CCTHHHHHHHHHTTC-CTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 279999999999986-6998311788999999999999998299977079845762888999999887521222002257
Q ss_pred -CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCC---HHHHHHHCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf -69925763887356999999818803641554356778899973000---24313303663322222379999999737
Q T0636 88 -SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSR---DDCVVLANPSNPTGQALSAGELDQLRQRA 163 (336)
Q Consensus 88 -~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~---~~~i~l~nPnNPTG~~~~~~~l~~l~~~~ 163 (336)
..+.++++.-+-.....+++..|.+++.+|.++++.+|++++++..+ ..+++.+.++++||.+-+.++|.++++++
T Consensus 121 ~~~~~il~~~~~H~s~~kaa~~~G~~~~~v~~~~~~~id~~~l~~~~~~~~~~~vv~~~~~t~~G~~~~l~~I~~i~~~~ 200 (397)
T 3f9t_A 121 NEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKEN 200 (397)
T ss_dssp CSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCCCCCCCC
T ss_conf 86867998463166777777750861478730455446888875443101234210144315655122154221211233
Q ss_pred CC-CCCCCCCCCCC----CCCCC--HHHH----CCCH-HHHHHHHHHHCCCCCCCEEECC-CHHHHHHHHHCCC------
Q ss_conf 87-20252100258----86620--0332----4520-0120234652334345313117-8899999973378------
Q T0636 164 GK-LLIDETYVDYS----SFRAR--GLAY----GENE-LVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRKQW------ 224 (336)
Q Consensus 164 ~~-~IvDeaY~~f~----~~~~~--~l~~----~~n~-iv~~S~SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~------ 224 (336)
+. ++||.|+..+. ..... .+.. ..++ .+.-|..|..+.| ..+|+++. ++++.+.+.....
T Consensus 201 g~~l~vD~A~~~~~~~~~~~~~~~~g~~~~~~~~~~~D~~~~s~hK~l~~p-~g~g~~~~r~~~~~~~~~~~~~y~~~~~ 279 (397)
T 3f9t_A 201 NIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCP-IPSGGILFKDIGYKRYLDVDAPYLTETR 279 (397)
T ss_dssp TCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCC-SSCEEEEESSGGGGGGTCEECTTSSSSE
T ss_pred CHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC-CCCCCCEECCHHHHHHHHCCCCHHCCCC
T ss_conf 322211434215746554315551587323455678647994443234666-7875540167899997420564000234
Q ss_pred -CC---CCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEE-ECCCCCEEEEECCCHHHHHHHHHHCC
Q ss_conf -77---8777789999999745--99999999999999999999998589786-16986478865698899999998769
Q T0636 225 -FC---NVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGLGYRV-ASSEANFVLVENAAGERTLRFLRERG 297 (336)
Q Consensus 225 -~~---~~~~~~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~-~~s~~~Fi~~~~~~~~~~~~~L~~~g 297 (336)
.. +-+.....+..++++. .+-+++..++..+..+++.+.|++.|+.. .++..+++.++..+..++.+.|.++|
T Consensus 280 ~~~~~gsr~~~~~~~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~p~~~iv~~~~~~~~~l~~~L~~~G 359 (397)
T 3f9t_A 280 QATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDEDYKEVCKKLRDRG 359 (397)
T ss_dssp ECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTTHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCHHHHHHHHHHCC
T ss_conf 45533440444433788999876677799999999999999999987089989707954489835899999999999779
Q ss_pred CEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 38960778888874788747---989999999999999842
Q T0636 298 IQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 298 i~vr~~~~fg~~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
|.+.... .+..+|+++. |+|++++|+++|+++..+
T Consensus 360 i~v~~~~---~~~~lRi~~~~~~t~e~id~l~~~l~~i~ke 397 (397)
T 3f9t_A 360 IYVSVCN---CVKALRIVVMPHIKREHIDNFIEILNSIKRD 397 (397)
T ss_dssp CBCEECS---SSSEEEEECCTTCCHHHHHHHHHHHHHHC--
T ss_pred CEEECCC---CCCEEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf 8897278---9977999974999999999999999998658
No 88
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.85 E-value=3.8e-20 Score=148.75 Aligned_cols=299 Identities=14% Similarity=0.147 Sum_probs=178.9
Q ss_pred CCCHHHHHHHHHHHHHHH------CCC-CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCC
Q ss_conf 876899999999987500------588-986189999999984888543886077889999999984--69925763887
Q T0636 28 AVEPRVQAAIAAAAARIN------RYP-FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPG 98 (336)
Q Consensus 28 ~p~~~v~~al~~~~~~~~------~Yp-d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~ 98 (336)
|=.|.+.+++.++++.+. .|. ++...+|.+++|+++|.+ +-|++++| ++++..++.++ +||++++..+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yg~~p~v~~lE~~~A~~~G~e-~al~~~SG-t~An~~Al~al~~~Gd~viV~~~~ 95 (357)
T 3lws_A 18 GHGKRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVLGMD-DAVFFPSG-TMAQQVALRIWSDETDNRTVAYHP 95 (357)
T ss_dssp BSSCCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHHTCS-EEEEESCH-HHHHHHHHHHHHHHHTCCEEEECT
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CEEEECCH-HHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 6897789999999998547767883689989999999999986999-69993289-999999999982899848998555
Q ss_pred CHHHH-----HHHHHHCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCC-CCHHHH---HHHHHHCCC-CCC
Q ss_conf 35699-----99998188036415543567788999730002431330366332222-237999---999973787-202
Q T0636 99 FDGYR-----ARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQA-LSAGEL---DQLRQRAGK-LLI 168 (336)
Q Consensus 99 y~~y~-----~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~-~~~~~l---~~l~~~~~~-~Iv 168 (336)
|.... ......+..+..++.. +...+.+......+++.+++++|+||+|.. ++.++| .+++++++. +++
T Consensus 96 ~~h~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~l~~i~~~a~~~~~~li~ 174 (357)
T 3lws_A 96 LCHLEIHEQDGLKELHPIETILVGAA-DRLMTLDEIKALPDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHL 174 (357)
T ss_dssp TCHHHHSSTTHHHHHSSCEEEECSCT-TSCCCHHHHHTCCSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHCCHHHCCCEEEEEECCC-CCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 04799985000553366058863033-32233443014886316999801026787154399999988877654973132
Q ss_pred CCCCCCCCC--CCCCHH-HHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCC----CHHHHHHHHHHHH
Q ss_conf 521002588--662003-324520012023465233434531311788999999733787787----7778999999974
Q T0636 169 DETYVDYSS--FRARGL-AYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNV----GTLDLHALEAALD 241 (336)
Q Consensus 169 DeaY~~f~~--~~~~~l-~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~----~~~~~~aa~~~l~ 241 (336)
|++|..+.. ...... ......+++.|++|.++..| .|+++++.++++.++..+..++- ......+....+
T Consensus 175 D~a~~~g~~~~~~~~~~~~~~~~d~~~~~~~k~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~- 251 (357)
T 3lws_A 175 DGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIA--GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYY- 251 (357)
T ss_dssp EETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH-
T ss_pred CCHHHCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCC--EEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-
T ss_conf 22110465323455600024444069985047755565--399980489999999999982886567799999999898-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEC--CCCCEEEEECCC-----HHHHHHHHHHCCCEEEECCCCC-CCCEE
Q ss_conf 59999999999999999999999858-978616--986478865698-----8999999987693896077888-88747
Q T0636 242 NDRAREAHIAKTLAQRRRVADALRGL-GYRVAS--SEANFVLVENAA-----GERTLRFLRERGIQVKDAGQFG-LHHHI 312 (336)
Q Consensus 242 ~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~--s~~~Fi~~~~~~-----~~~~~~~L~~~gi~vr~~~~fg-~~~~i 312 (336)
+...++.++..++++++.+.|+++ |+++.+ +++|++|+.++. .+.+.+.|.++||.+.++..+. ....+
T Consensus 252 --~~~~~~~~~~~~~a~~la~~L~~~~gv~~~~~~~~t~~v~~~~~~~~~~~~~~l~~~L~~~GI~~~~~~~~~~~~~~~ 329 (357)
T 3lws_A 252 --ELRKDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCST 329 (357)
T ss_dssp --HHHTTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEE
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEE
T ss_conf --851577779999999999988647985406799986289999479568899999999984998996536899977999
Q ss_pred EEEECCH---HHHHHHHHHHHHHHH
Q ss_conf 8874798---999999999999984
Q T0636 313 RISIGRE---EDNDRLLAALAEYSD 334 (336)
Q Consensus 313 Ris~~~~---ee~~~l~~aL~~~~e 334 (336)
|++++.. .+.+.+.++++++.+
T Consensus 330 r~~v~~~~~~~~~e~~~~a~~rl~~ 354 (357)
T 3lws_A 330 EISVGDAYGELDQQTRDAGFARLRQ 354 (357)
T ss_dssp EEEBCTTGGGSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 9961653456679999999999999
No 89
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.85 E-value=7.1e-19 Score=140.53 Aligned_cols=312 Identities=13% Similarity=0.121 Sum_probs=198.3
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHCC-CC--CCHHHHHHHHHHHHCCCHHHE-EEECCHHHHHHHHHHHH--CCCC
Q ss_conf 573576548887689999999998750058-89--861899999999848885438-86077889999999984--6992
Q T0636 18 VCLAFNENPEAVEPRVQAAIAAAAARINRY-PF--DAEPRVMRKLAEHFSCPEDNL-MLVRGIDECFDRISAEF--SSMR 91 (336)
Q Consensus 18 i~L~~Nenp~~p~~~v~~al~~~~~~~~~Y-pd--~~~~~Lr~aia~~~~v~~d~I-~~t~Gs~~~i~~~~~~~--~~~~ 91 (336)
-+|-++.-|-+.+|.|++||.... ++.+ ++ .-..+.|+.+++.+|.+..++ +++.|++.++..++..+ +|++
T Consensus 19 ~~~l~~pGP~~v~~~V~~am~~~~--~~hr~~~f~~~~~~~r~~l~~ll~~~~~~~i~~~gsgT~a~~a~~~~~~~~g~~ 96 (393)
T 2huf_A 19 NKLLMGPGPSNAPQRVLDAMSRPI--LGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDV 96 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTSCC--CCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCE
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCE
T ss_conf 663231899789999999747677--887889999999999999999959999868999282899999999983689998
Q ss_pred EEECCCCCHH--HHHHHHHHCCCEEEECCCCCCCCCHHHHHH---HCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-
Q ss_conf 5763887356--999999818803641554356778899973---0002431330366332222237999999973787-
Q T0636 92 FVTAWPGFDG--YRARIAVSGLRHFEIGLTDDLLLDPNDLAQ---VSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK- 165 (336)
Q Consensus 92 vii~~P~y~~--y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~---~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~- 165 (336)
+++..-++.. ....++..|..+..++.+.+..+|.+.+++ ..+++++.++.-+|.||.+.+.++|.+++++++.
T Consensus 97 vl~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~h~~t~tG~i~pi~~I~~~~~~~g~~ 176 (393)
T 2huf_A 97 ILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCL 176 (393)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCE
T ss_pred EEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCE
T ss_conf 99960762888999999983991576303788865879999986338964999987677765427899999999866976
Q ss_pred CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH-CCCCCCCEEECCCHHHHHHHHHCCCC-------------------
Q ss_conf 2025210025886620033245200120234652-33434531311788999999733787-------------------
Q T0636 166 LLIDETYVDYSSFRARGLAYGENELVFRSFSKSY-GLAGLRLGALFGPSELIAAMKRKQWF------------------- 225 (336)
Q Consensus 166 ~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~-gl~GlRiG~~i~~~~~i~~l~~~~~~------------------- 225 (336)
+++|.+.. ++......-...-+. ++.|--|.+ |.+| +|+++..++.++.+......
T Consensus 177 ~~vDa~qs-~g~~pid~~~~g~D~-~~~s~~K~l~gp~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (393)
T 2huf_A 177 LIVDTVAS-LGGAPMFMDRWEIDA-MYTGSQKVLGAPPG--ITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFG 252 (393)
T ss_dssp EEEECTTT-BTTBCCCTTTTTCSE-EECCSSSTTCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSS
T ss_pred EEEECCHH-CCCCCCCHHCCCCCE-EEECCCCCCCCCCC--EEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 99875321-167532321157736-86035542579982--554203889998763048765301320666532001357
Q ss_pred ------CCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC---CC-EEEEEC---CCHHHHH
Q ss_conf ------78777789999999745--999999999999999999999985897861698---64-788656---9889999
Q T0636 226 ------CNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGLGYRVASSE---AN-FVLVEN---AAGERTL 290 (336)
Q Consensus 226 ------~~~~~~~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~---~~-Fi~~~~---~~~~~~~ 290 (336)
++.+.....+...++.. .+-++...++..+.++.+.+.|+++++..+... .+ -+.+.. .++..+.
T Consensus 253 ~~~~~~~t~~~~~~~~l~~a~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~g~~~~~~~ 332 (393)
T 2huf_A 253 RPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGVDWLKAA 332 (393)
T ss_dssp SCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTCCHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHCCCEEEEEECCCCCCHHHHH
T ss_conf 88755644516799999999999996169999999999999999999966984335957708728999899999999999
Q ss_pred HHHH-HCCCEEEECCCCCCCCEEEEE-EC---CHHHHHHHHHHHHHHHHC
Q ss_conf 9998-769389607788888747887-47---989999999999999842
Q T0636 291 RFLR-ERGIQVKDAGQFGLHHHIRIS-IG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 291 ~~L~-~~gi~vr~~~~fg~~~~iRis-~~---~~ee~~~l~~aL~~~~e~ 335 (336)
+.|. ++||.+..|...--.+.+||| +| |+|++++++++|+++.++
T Consensus 333 ~~l~~~~~i~v~~g~~~~~~~~~Ris~~G~~~t~edid~li~al~e~l~~ 382 (393)
T 2huf_A 333 QYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp HHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEECCCCHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99985499999766711029989983787779999999999999999998
No 90
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; X-RAY, aspartate aminotransferase, colitose, perosamine, O- antigen, PLP; HET: G4M; 1.70A {Escherichia coli O55} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.84 E-value=1.8e-17 Score=131.43 Aligned_cols=290 Identities=12% Similarity=0.109 Sum_probs=184.5
Q ss_pred CHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---------CCCCEEECCCCC
Q ss_conf 689999999998750058898-6189999999984888543886077889999999984---------699257638873
Q T0636 30 EPRVQAAIAAAAARINRYPFD-AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---------SSMRFVTAWPGF 99 (336)
Q Consensus 30 ~~~v~~al~~~~~~~~~Ypd~-~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---------~~~~vii~~P~y 99 (336)
.+..++++.+.+.. ..|... .-.+|.+++|+++|. +..+.++++++|+.++++++ +||+|+++.++|
T Consensus 14 ~~~~~~~v~~~l~~-~~~~~G~~~~~~E~~~A~~~g~--~~ai~~~sGt~A~~~al~al~~~~~~~l~~GD~Vi~~~~~~ 90 (390)
T 3b8x_A 14 DDLEYKAIQSVLDS-KMFTMGEYVKQYETQFAKTFGS--KYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSW 90 (390)
T ss_dssp CHHHHHHHHHHHHH-TCCSSCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSC
T ss_pred CHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
T ss_conf 99999999999977-9854787699999999998788--85999689999999999998754112789989999889861
Q ss_pred HHHHHHHHHHCCCEEEECCCC-CCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCCCCC
Q ss_conf 569999998188036415543-567788999730--0024313303663322222379999999737872-025210025
Q T0636 100 DGYRARIAVSGLRHFEIGLTD-DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKL-LIDETYVDY 175 (336)
Q Consensus 100 ~~y~~~~~~~g~~~~~vp~~~-~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~-IvDeaY~~f 175 (336)
......+...|.+++.++.+. ++.++++++++. .++++++++ +++|...+.++|.++|++++++ |+|+++.-+
T Consensus 91 ~~~~~~i~~~G~~~v~~dvd~~~~~~~~e~l~~~~~~~t~~v~~~---~~~g~~~dl~~I~~ia~~~gi~li~D~a~a~G 167 (390)
T 3b8x_A 91 STTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTV---NLLGNPNNFDEINKIIGGRDIILLEDNCESMG 167 (390)
T ss_dssp HHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTT
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCC---CCCCCCCCHHHHHHHHHHCCCCEEEECHHHCC
T ss_conf 999999998599899971587745579999997602453433233---46787337999999999769978944443305
Q ss_pred CCCCCCHHH-HCCCHHHHHHHHHHHCCCCCCCEEECC-CHHHHHHHHHCCCCC---------------------------
Q ss_conf 886620033-245200120234652334345313117-889999997337877---------------------------
Q T0636 176 SSFRARGLA-YGENELVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRKQWFC--------------------------- 226 (336)
Q Consensus 176 ~~~~~~~l~-~~~n~iv~~S~SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~~~--------------------------- 226 (336)
.......+. ..+-.++..+.+|.++ +-.-|+++. ++++.+.++..+...
T Consensus 168 ~~~~~~~~g~~~d~~~~s~~~~K~l~--~~~GG~i~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
T 3b8x_A 168 ATFNNKCAGTFGLMGTFSSFYSNHIA--TMEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFV 245 (390)
T ss_dssp CEETTEETTSSSSEEEEECCTTSSSC--SSSCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBC
T ss_pred CCCCCEECCCCCCEEEEEEECCCCCC--CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEEEE
T ss_conf 63588042467642678863577676--7881289818999999999988579676654334433334420111210221
Q ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EECC--CCC---E-EEEECC---CHHHHH
Q ss_conf ------87777899999997459999999999999999999999858978-6169--864---7-886569---889999
Q T0636 227 ------NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYR-VASS--EAN---F-VLVENA---AGERTL 290 (336)
Q Consensus 227 ------~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~-~~~s--~~~---F-i~~~~~---~~~~~~ 290 (336)
.++.+....+...+ ..+++..++.++..+++.+.|++++.. +.+. +.+ | +++... +.+.+.
T Consensus 246 ~~g~~~~~~~~~aa~~~~~l---~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 322 (390)
T 3b8x_A 246 LPGYNVRPLEMSGAIGIEQL---KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLV 322 (390)
T ss_dssp SCCCBCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHH
T ss_conf 13734687999999999861---556799999999999999996179982057899986148999998378887899999
Q ss_pred HHHHHCCCEEEECCCCC------------------C-------CCEEEEEEC---CHHHHHHHHHHHH
Q ss_conf 99987693896077888------------------8-------874788747---9899999999999
Q T0636 291 RFLRERGIQVKDAGQFG------------------L-------HHHIRISIG---REEDNDRLLAALA 330 (336)
Q Consensus 291 ~~L~~~gi~vr~~~~fg------------------~-------~~~iRis~~---~~ee~~~l~~aL~ 330 (336)
+.|.++||.++++.... + .+.+|+.+. |.+|+++++++||
T Consensus 323 ~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~a~~l~~~~l~lp~h~~~t~edid~i~~~lk 390 (390)
T 3b8x_A 323 ENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVLK 390 (390)
T ss_dssp HHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 99997799677546774543566787428777789979999971969821899999999999999739
No 91
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal phosphate dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.83 E-value=2.5e-17 Score=130.52 Aligned_cols=313 Identities=14% Similarity=0.136 Sum_probs=190.6
Q ss_pred CCCCEECCCCCCCCCC--CHHHHHHHHHHHHHHH------C--CCC-CCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHH
Q ss_conf 6553573576548887--6899999999987500------5--889-861899999999848885438860778899999
Q T0636 14 AAQAVCLAFNENPEAV--EPRVQAAIAAAAARIN------R--YPF-DAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDR 82 (336)
Q Consensus 14 ~~~~i~L~~Nenp~~p--~~~v~~al~~~~~~~~------~--Ypd-~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~ 82 (336)
..+++.+++| |=||. -|.++++..+++.+.. + +.. +-+.+|.+.||+++|. ++.+++.+|-...+..
T Consensus 45 ~~~~~~FsSn-dYLGL~~~p~v~~a~~~a~~~~G~g~~~Sr~~~G~~~~h~~LE~~lA~~~g~-e~al~~~sG~~an~~~ 122 (401)
T 2bwn_A 45 KQDITVWCGN-DYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-EAALVFSSAYNANDAT 122 (401)
T ss_dssp EEEEEECSCS-CTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-SEEEEESCHHHHHHHH
T ss_pred CEEEEEEECC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCCCCCCCHHHHHHH
T ss_conf 7489998852-0017689999999999999985898746523328857899999999997699-8501012214778889
Q ss_pred HHH---HHCCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCC--HH-HHHHHCCCCCCCCCCCHHHH
Q ss_conf 999---8469925763887356999999818803641554356778899973000--24-31330366332222237999
Q T0636 83 ISA---EFSSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSR--DD-CVVLANPSNPTGQALSAGEL 156 (336)
Q Consensus 83 ~~~---~~~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~--~~-~i~l~nPnNPTG~~~~~~~l 156 (336)
+.. ..++|-++...-.-......+++.+.++..++.. |.. |++.+.+..+ .+ +|++..-..-+|.+.+..+|
T Consensus 123 i~~l~~~~~~d~i~~D~~~HaSi~~g~~ls~a~~~~f~Hn-d~~-~l~~~~~~~~~~~~~~iv~egvySmdGdiapL~~l 200 (401)
T 2bwn_A 123 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-DVA-HLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEI 200 (401)
T ss_dssp HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-CHH-HHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHH
T ss_pred HHHHHHCCCCCCEECHHHHHHHCCHHHHHCCCCEEEEECC-CHH-HHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHH
T ss_conf 9988725689844435241441120443056853674067-267-66776664046565069997530576433643877
Q ss_pred HHHHHHCC-CCCCCCCCCC--CCCCCCCHHH-----HCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC--C
Q ss_conf 99997378-7202521002--5886620033-----24520012023465233434531311788999999733787--7
Q T0636 157 DQLRQRAG-KLLIDETYVD--YSSFRARGLA-----YGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF--C 226 (336)
Q Consensus 157 ~~l~~~~~-~~IvDeaY~~--f~~~~~~~l~-----~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~--~ 226 (336)
.+|+++++ .++||||+.- +++ .-.... ..+..+++.||||+||..| ||+.+++++++.++....+ |
T Consensus 201 ~~l~~~y~~~L~vDeAHs~Gv~G~-~G~G~~~~~g~~~~vdi~~~tlsKA~Gs~G---G~v~g~~~~i~~l~~~~~~~if 276 (401)
T 2bwn_A 201 CDIAEEFGALTYIDEVHAVGMYGP-RGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGFIF 276 (401)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSST-TSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHHHT
T ss_pred HHHHHCCCEEEEEECCEEEEEECC-CCCCCHHHCCCCCCCCEECCCCCCCCCCCC---CCCCHHHHHHHHHHHCCCHHHH
T ss_conf 665412532899843202441037-887404540985101200024555553356---4120037899998740313441
Q ss_pred CC--CHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCH---HHHHHH-HHHCCC
Q ss_conf 87--77789999999745--99999999999999999999998589786169864788656988---999999-987693
Q T0636 227 NV--GTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENAAG---ERTLRF-LRERGI 298 (336)
Q Consensus 227 ~~--~~~~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~~~---~~~~~~-L~~~gi 298 (336)
+. +.+...++.++++- .+...+.+.++....+++...++.+|+.+.+++++-+-+-+.+. ..+.+. |+++||
T Consensus 277 S~~lpp~~~aa~~~~l~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~spI~pi~~g~~~~~~~~~~~lL~e~Gi 356 (401)
T 2bwn_A 277 STSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGV 356 (401)
T ss_dssp SBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCE
T ss_conf 45687899999999876630311778888767899999999996799868999997999969999999999999996898
Q ss_pred EEEECCCCCC---CCEEEEEEC---CHHHHHHHHHHHHHHHH
Q ss_conf 8960778888---874788747---98999999999999984
Q T0636 299 QVKDAGQFGL---HHHIRISIG---REEDNDRLLAALAEYSD 334 (336)
Q Consensus 299 ~vr~~~~fg~---~~~iRis~~---~~ee~~~l~~aL~~~~e 334 (336)
++.+...|.. ...+||++. |++|+++++++|+++-.
T Consensus 357 ~v~~i~yPtVp~g~~rlRi~lsa~ht~~dId~l~~~L~~~~~ 398 (401)
T 2bwn_A 357 YVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWA 398 (401)
T ss_dssp ECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC-
T ss_pred EEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 999976897899972799974766899999999999999998
No 92
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippurate, 3-hydroxyhippuric acid; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.81 E-value=2.6e-17 Score=130.46 Aligned_cols=313 Identities=13% Similarity=0.092 Sum_probs=185.6
Q ss_pred CCCCCEECCCCCCCCCC-CHHHHHHHHHHHHHH-------HCCCC----CCHHHHHHHHHHHHCCCHHHEEEECCHHHHH
Q ss_conf 66553573576548887-689999999998750-------05889----8618999999998488854388607788999
Q T0636 13 AAAQAVCLAFNENPEAV-EPRVQAAIAAAAARI-------NRYPF----DAEPRVMRKLAEHFSCPEDNLMLVRGIDECF 80 (336)
Q Consensus 13 ~~~~~i~L~~Nenp~~p-~~~v~~al~~~~~~~-------~~Ypd----~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i 80 (336)
..++.|+|+.|. +|+ |+.+++++.+.+++- +.+.. ....++|+.+|+..|.++++|++|+|+++++
T Consensus 64 ~~~~~iYld~nS--lG~~p~~~~~~i~~~l~~w~~~~~~~~~~~~~~w~~~~e~~r~~iA~liGA~~~EVv~t~s~T~~l 141 (465)
T 3e9k_A 64 KDENAIYFLGNS--LGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNL 141 (465)
T ss_dssp TTCBCEECBTTT--SCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHH
T ss_pred CCCCEEEECCCC--CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
T ss_conf 899908936865--477888999999999999986364777667653557999999999887094978589978807999
Q ss_pred HHHHHHHC-----CCCEEECCCCCHHH----HHHHHHHCCCE----EEE-CCCCCCCCCHHH---HHH--HCCHHHHHHH
Q ss_conf 99999846-----99257638873569----99999818803----641-554356778899---973--0002431330
Q T0636 81 DRISAEFS-----SMRFVTAWPGFDGY----RARIAVSGLRH----FEI-GLTDDLLLDPND---LAQ--VSRDDCVVLA 141 (336)
Q Consensus 81 ~~~~~~~~-----~~~vii~~P~y~~y----~~~~~~~g~~~----~~v-p~~~~~~~d~~~---l~~--~~~~~~i~l~ 141 (336)
+.++.++. ++.|++.+-.|+.- ...++..|.++ +.+ +...+...+.++ +.. ..++++|.++
T Consensus 142 ~~~l~~~~~~~~~~~~Ii~~~~efps~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~~~~d~~~l~~~~~~~t~lV~ls 221 (465)
T 3e9k_A 142 HLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFS 221 (465)
T ss_dssp HHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEE
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEE
T ss_conf 99997424433788525531002653499999999980997513333147778766445541999996268997699995
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCHHHH-CCCHHHHHHHHHHHC-CCCCCCEEECCCHHHHHH
Q ss_conf 3663322222379999999737872-0252100258866200332-452001202346523-343453131178899999
Q T0636 142 NPSNPTGQALSAGELDQLRQRAGKL-LIDETYVDYSSFRARGLAY-GENELVFRSFSKSYG-LAGLRLGALFGPSELIAA 218 (336)
Q Consensus 142 nPnNPTG~~~~~~~l~~l~~~~~~~-IvDeaY~~f~~~~~~~l~~-~~n~iv~~S~SK~~g-l~GlRiG~~i~~~~~i~~ 218 (336)
.-||-||.+.+.++|.++++.++.+ ++|.+.. .+..+..+.. .-+ +++.|.-|.+. -||- +|++...+++.+.
T Consensus 222 ~V~~~tG~~~di~~I~~~a~~~g~~v~vD~aqa--~G~~pidv~~~~vD-f~~~s~hK~l~~GP~G-~g~lyv~~~~~~~ 297 (465)
T 3e9k_A 222 GVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHA--VGNVELYLHDWGVD-FACWCSYKYLNAGAGG-IAGAFIHEKHAHT 297 (465)
T ss_dssp SBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTT--TTTSCCCHHHHTCC-EEEECSSSTTCCCTTC-CCEEEECGGGTTT
T ss_pred CCCCCCCEECCHHHHHHHHHHCCCEEEEECCCC--CCCCCCCHHHHCCC-EEEEECCCCCCCCCCE-EEEEEECHHHHHH
T ss_conf 767777546769999999854596799987344--20026547774578-1897635563579973-8999845677765
Q ss_pred HHH---------------------------CCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHC--
Q ss_conf 973---------------------------378778777789999999745999--9999999999999999999858--
Q T0636 219 MKR---------------------------KQWFCNVGTLDLHALEAALDNDRA--REAHIAKTLAQRRRVADALRGL-- 267 (336)
Q Consensus 219 l~~---------------------------~~~~~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~r~~l~~~l~~l-- 267 (336)
+.. .....+.+..+..+..++++.... +.+..++...-.+++.+.++.+
T Consensus 298 ~~p~~~g~~~~~~~~~f~~~~~~~~~~~~~~~~~gt~~~~~~~~~~a~l~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~ 377 (465)
T 3e9k_A 298 IKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYG 377 (465)
T ss_dssp SCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 21356687653354000101345655304555405764014678999999987536999999999999999999875437
Q ss_pred ---------CCEEE-CCC----CCEEEEECCC-HHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC----CHHHHHHHHHH
Q ss_conf ---------97861-698----6478865698-89999999876938960778888874788747----98999999999
Q T0636 268 ---------GYRVA-SSE----ANFVLVENAA-GERTLRFLRERGIQVKDAGQFGLHHHIRISIG----REEDNDRLLAA 328 (336)
Q Consensus 268 ---------g~~~~-~s~----~~Fi~~~~~~-~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~----~~ee~~~l~~a 328 (336)
++++. |.. |..+-+.++. +..+.+.|.++||.+- +.-++.||+|++ |.+|+++++++
T Consensus 378 ~~~~~~~~~~~~i~tP~~~~~Rg~~vs~~~~~~~~~v~~~L~~~gIi~d----~R~~~~iRis~~~~Ynt~edId~~i~~ 453 (465)
T 3e9k_A 378 KDKAATKKPVVNIITPSHVEERGCQLTITFSVPNKDVFQELEKRGVVCD----KRNPNGIRVAPVPLYNSFHDVYKFTNL 453 (465)
T ss_dssp ---------CEEECSCSSGGGBCSCEEEEECCTTCCHHHHHHTTTEECE----EETTTEEEEBCCTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEECCCCHHHCCCEEEEECCCCHHHHHHHHHHCCCEEC----CCCCCEEEEECCCCCCCHHHHHHHHHH
T ss_conf 4223346786257467767353047999758987999999998798862----458897999689778999999999999
Q ss_pred HHHHHHC
Q ss_conf 9999842
Q T0636 329 LAEYSDH 335 (336)
Q Consensus 329 L~~~~e~ 335 (336)
|++++|+
T Consensus 454 L~~il~~ 460 (465)
T 3e9k_A 454 LTSILDS 460 (465)
T ss_dssp HHHHHTC
T ss_pred HHHHHHH
T ss_conf 9999850
No 93
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, joint center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} PDB: 3kgx_A 1h0c_A* 1j04_A*
Probab=99.81 E-value=2e-17 Score=131.11 Aligned_cols=312 Identities=14% Similarity=0.134 Sum_probs=194.9
Q ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHCC-CC--CCHHHHHHHHHHHHCCCHH-HEEEECCHHHHHHHHHHHH--CCCCE
Q ss_conf 73576548887689999999998750058-89--8618999999998488854-3886077889999999984--69925
Q T0636 19 CLAFNENPEAVEPRVQAAIAAAAARINRY-PF--DAEPRVMRKLAEHFSCPED-NLMLVRGIDECFDRISAEF--SSMRF 92 (336)
Q Consensus 19 ~L~~Nenp~~p~~~v~~al~~~~~~~~~Y-pd--~~~~~Lr~aia~~~~v~~d-~I~~t~Gs~~~i~~~~~~~--~~~~v 92 (336)
+|-++.-|-+.||.|++||... .++.+ ++ .-..+.|+.+++.++++.+ .|+++.|+++++..++..+ +++.+
T Consensus 24 ~~l~~PGP~~~~~~Vl~am~~~--~i~hrs~ef~~i~~~~r~~l~~l~~~~~~~~iif~gsgT~a~~a~~~~~~~~~~~v 101 (393)
T 3kgw_A 24 RLLLGPGPSNLAPRVLAAGSLR--MIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSF 101 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTCC--CCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred CCCCCCCCCCCCHHHHHHHCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEE
T ss_conf 7544289978999999974768--88878889999999999999999689998589977968999999999702778824
Q ss_pred EECCCCCHHH--HHHHHHHCCCEEEECCCCCCCCCHHHHHH---HCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-C
Q ss_conf 7638873569--99999818803641554356778899973---0002431330366332222237999999973787-2
Q T0636 93 VTAWPGFDGY--RARIAVSGLRHFEIGLTDDLLLDPNDLAQ---VSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-L 166 (336)
Q Consensus 93 ii~~P~y~~y--~~~~~~~g~~~~~vp~~~~~~~d~~~l~~---~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~ 166 (336)
++..-++... ...+...+..+..++.+....+|.+..+. ..++++++++.-+|.||...+.++|.++++.++. +
T Consensus 102 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~pi~~I~~~~~~~g~~~ 181 (393)
T 3kgw_A 102 LTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLL 181 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEE
T ss_pred EEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECEEEEEEECCCHHHHHHHHHHCCCEE
T ss_conf 43215514668999999809950220478888779899999874599738998331331231377999999998749807
Q ss_pred CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC-----------------------
Q ss_conf 025210025886620033245200120234652334345313117889999997337-----------------------
Q T0636 167 LIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ----------------------- 223 (336)
Q Consensus 167 IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~----------------------- 223 (336)
++|.+-. ++.. ...+....--+++.|--|.++.|+ -+|+++.++...+......
T Consensus 182 ~vD~~~s-~g~~-~~~~~~~~~d~~~~s~~K~l~~p~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (393)
T 3kgw_A 182 LVDSVAS-LGGV-PIYMDQQGIDIMYSSSQKVLNAPP-GISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGET 258 (393)
T ss_dssp EEECTTT-TTTS-CCCTTTTTCCEEEEESSSTTCCCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSC
T ss_pred EEEECCC-CCCE-EECCCCCCCCEEEECCHHHCCCCC-CEEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCC
T ss_conf 9971346-5500-000123687589743413227998-679999767887533201246743222011134443000246
Q ss_pred --CCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC----C-CEEEEECC---CHHHHHH
Q ss_conf --87787777899999997459--99999999999999999999985897861698----6-47886569---8899999
Q T0636 224 --WFCNVGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVASSE----A-NFVLVENA---AGERTLR 291 (336)
Q Consensus 224 --~~~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~----~-~Fi~~~~~---~~~~~~~ 291 (336)
.+++.+..+..++..++... .-.....++.....+.+.+.++..++..+..+ . .-+-+..+ ++.++.+
T Consensus 259 ~~~~~t~~~~~i~~~~~~l~~~~~~g~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~rs~~i~~~~~p~~~~~~~~~~ 338 (393)
T 3kgw_A 259 RVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYNWRDIVS 338 (393)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCEEEEECCCCCCHHHHHH
T ss_conf 76478773668989999999999703068999999999999999985587000588676588089998899989999999
Q ss_pred HHHH-CCCEEEECCCCCCCCEEEEE-EC---CHHHHHHHHHHHHHHHHC
Q ss_conf 9987-69389607788888747887-47---989999999999999842
Q T0636 292 FLRE-RGIQVKDAGQFGLHHHIRIS-IG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 292 ~L~~-~gi~vr~~~~fg~~~~iRis-~~---~~ee~~~l~~aL~~~~e~ 335 (336)
.|.+ +||.++.|...--.+.+||| +| ++|++++++++|++++++
T Consensus 339 ~l~~~~~I~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~alk~~l~~ 387 (393)
T 3kgw_A 339 YVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp HHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9974399899567723459989995775659999999999999999998
No 94
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, structural genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.81 E-value=2e-16 Score=124.72 Aligned_cols=300 Identities=13% Similarity=0.100 Sum_probs=189.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCCCEEECCCCCHH
Q ss_conf 8876899999999987500588986--189999999984888543886077889999999984---69925763887356
Q T0636 27 EAVEPRVQAAIAAAAARINRYPFDA--EPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSMRFVTAWPGFDG 101 (336)
Q Consensus 27 ~~p~~~v~~al~~~~~~~~~Ypd~~--~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~~vii~~P~y~~ 101 (336)
.+|....++++.+.+.. +.|...| ..++.+++|++++.....++.+++++.++.++++++ +||+|+++..+|..
T Consensus 12 ~~~~~~~~~~~~~~~~s-~~~~~~G~~~~~fE~~~a~~~~~~~~~~~~~~sgt~al~~al~~l~~~~gdeVi~p~~t~~a 90 (377)
T 3ju7_A 12 TVPVIEYLDELKEIDAS-HIYTNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPA 90 (377)
T ss_dssp CCCGGGGHHHHHHHHHH-TCCSSSCHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTH
T ss_pred CCCHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
T ss_conf 68669999999999966-98657997999999999997589999999812499999999998098989989984035632
Q ss_pred HHHHHHHHCCCEEEECCCC-CCCCCHHHHHHHC--CHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9999998188036415543-5677889997300--024313303663322222379999999737872025210025886
Q T0636 102 YRARIAVSGLRHFEIGLTD-DLLLDPNDLAQVS--RDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDYSSF 178 (336)
Q Consensus 102 y~~~~~~~g~~~~~vp~~~-~~~~d~~~l~~~~--~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~IvDeaY~~f~~~ 178 (336)
....+...|.+++.++.+. +|.+|++.+++.. +++.+.+..|.|+.|...+.++|.++++++..+|.|+|+.-.+..
T Consensus 91 ~~~~i~~~G~~pvfvDvd~~~~~id~~~l~~~I~~~t~~~~~ii~~~~~G~~~d~~~i~~i~k~~i~lIeD~a~a~g~~~ 170 (377)
T 3ju7_A 91 TPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPYATFGSWMNLEEYEELEKKGVPVVVDAAPGFGLMN 170 (377)
T ss_dssp HHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCBCGGGBCCCCHHHHHHHHTTCCBEEECTTCTTCEE
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCC
T ss_conf 10113453433211333333222222233332223334443333333332211002466541344332333220000133
Q ss_pred CCCHHH-HCCCHHHHHHHH--HHHCCCCCCCEEECC-CHHHHHHHHHCCCC--------------CCCCHHHHHHHHHHH
Q ss_conf 620033-245200120234--652334345313117-88999999733787--------------787777899999997
Q T0636 179 RARGLA-YGENELVFRSFS--KSYGLAGLRLGALFG-PSELIAAMKRKQWF--------------CNVGTLDLHALEAAL 240 (336)
Q Consensus 179 ~~~~l~-~~~n~iv~~S~S--K~~gl~GlRiG~~i~-~~~~i~~l~~~~~~--------------~~~~~~~~~aa~~~l 240 (336)
...... .+.+ +.+.||. |..+ +..-|.++. ++++.+.++..+.. +.++.+....+...|
T Consensus 171 ~~~~~g~~~gd-~~~fSf~~~K~l~--~g~GG~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~Aaigl~qL 247 (377)
T 3ju7_A 171 GGMHYGQDFSG-MIIYSFHATKPFG--IGEGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATM 247 (377)
T ss_dssp TTEETTTTCSS-EEEEECBTTSSSC--CBSCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHH-HHHCCCCHHHCCC--CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 22233431144-4311320000122--23432000220577766655301222332223344332111123310334467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE-----CCCC---CEEEEECC---CHHHHHHHHHHCCCEEEECCCCC--
Q ss_conf 45999999999999999999999985897861-----6986---47886569---88999999987693896077888--
Q T0636 241 DNDRAREAHIAKTLAQRRRVADALRGLGYRVA-----SSEA---NFVLVENA---AGERTLRFLRERGIQVKDAGQFG-- 307 (336)
Q Consensus 241 ~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~-----~s~~---~Fi~~~~~---~~~~~~~~L~~~gi~vr~~~~fg-- 307 (336)
+.-+.+.+.++++ .++..+.|+..++... .... .|+.+-.+ ..+.+.+.|.++||.+++...+.
T Consensus 248 ~~ld~~~~~R~~i---a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~~~~~y~p~~~ 324 (377)
T 3ju7_A 248 KKWDDKLKERTRI---SEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCH 324 (377)
T ss_dssp HTHHHHHHHHHHH---HHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGG
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 7677775444535---6677776530334321122232333333222223410565999999999879985655897200
Q ss_pred ------------CC-------CEEEEEE---CCHHHHHHHHHHHHHHH
Q ss_conf ------------88-------7478874---79899999999999998
Q T0636 308 ------------LH-------HHIRISI---GREEDNDRLLAALAEYS 333 (336)
Q Consensus 308 ------------~~-------~~iRis~---~~~ee~~~l~~aL~~~~ 333 (336)
++ +.+++-+ -+.+|+++.+++|+|..
T Consensus 325 ~~~~~~~~~~~~~p~a~~i~~~~l~LP~~~~lt~~di~~I~~~l~~~v 372 (377)
T 3ju7_A 325 QQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKV 372 (377)
T ss_dssp GSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC--
T ss_pred CCHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 178870699789989999984889887999989999999999999999
No 95
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'- phosphate, hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.80 E-value=2.4e-17 Score=130.64 Aligned_cols=313 Identities=14% Similarity=0.084 Sum_probs=181.2
Q ss_pred CCCCEECCCCCCCCC-CCHHHHHHHHHHHHHHHCCCC----------CCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHH
Q ss_conf 655357357654888-768999999999875005889----------861899999999848885438860778899999
Q T0636 14 AAQAVCLAFNENPEA-VEPRVQAAIAAAAARINRYPF----------DAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDR 82 (336)
Q Consensus 14 ~~~~i~L~~Nenp~~-p~~~v~~al~~~~~~~~~Ypd----------~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~ 82 (336)
.++.++|+.+- .+ +|+.|++++.+.+.+...-+. ....+.|+.+|+++|+++++|++|.|+++++..
T Consensus 26 ~~~~~YLd~as--~~~~p~~v~~a~~~~l~~~~~n~~~~~~~~~~~~~~~e~aR~~ia~ll~a~~~ei~~~~~~T~~~~~ 103 (416)
T 1qz9_A 26 PEGVIYLDGNS--LGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFK 103 (416)
T ss_dssp CTTCEECCTTT--SCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHH
T ss_pred CCCCEECCCCC--CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHH
T ss_conf 99999856850--0436799999999999998624575655513389999999999999819797588997585278777
Q ss_pred HHHHH--------CCCCEEECCCC-CHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHH--HCCHHHHHHHCCCCCCCCCC
Q ss_conf 99984--------69925763887-356999999818803641554356778899973--00024313303663322222
Q T0636 83 ISAEF--------SSMRFVTAWPG-FDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQ--VSRDDCVVLANPSNPTGQAL 151 (336)
Q Consensus 83 ~~~~~--------~~~~vii~~P~-y~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~--~~~~~~i~l~nPnNPTG~~~ 151 (336)
++..+ +++.+++..-. ++.... ....+.++..++...+...+++.+++ ..+|+++.++.-||-||.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~T~lV~v~~v~n~tG~~~ 182 (416)
T 1qz9_A 104 VLSAALRVQATRSPERRVIVTETSNFPTDLY-IAEGLADMLQQGYTLRLVDSPEELPQAIDQDTAVVMLTHVNYKTGYMH 182 (416)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEETTSCHHHHH-HHHHHHHHHCSSCEEEEESSGGGHHHHCSTTEEEEEEESBCTTTCBBC
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCHHHHH-HHHHCCCEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCEE
T ss_conf 7666787640468997799964430156799-997102232022113456899999974688835999975248877461
Q ss_pred CHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHC--------
Q ss_conf 3799999997378-7202521002588662003324520012023465233434531311788999999733--------
Q T0636 152 SAGELDQLRQRAG-KLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRK-------- 222 (336)
Q Consensus 152 ~~~~l~~l~~~~~-~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~-------- 222 (336)
+.++|.++++..+ .+++|-+.. .+.....+....--.+..|..|.++.+.--+|+.+..+.+.+.....
T Consensus 183 pi~~i~~~~~~~~~~~~vDa~q~--~g~~~~d~~~~~~d~~~~s~~K~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~ 260 (416)
T 1qz9_A 183 DMQALTALSHECGALAIWDLAHS--AGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHS 260 (416)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTT--TTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBC
T ss_pred CHHHHHHHHHHCCCEEEEECCCC--CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECHHHHHHCCCCCCCCCCCC
T ss_conf 69999988620574289851332--0124543324488677502335336799559999974787732778777678877
Q ss_pred -----------------CCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH-HHCCCEEECCC----
Q ss_conf -----------------78778777789999999745-----9999999999999999999999-85897861698----
Q T0636 223 -----------------QWFCNVGTLDLHALEAALDN-----DRAREAHIAKTLAQRRRVADAL-RGLGYRVASSE---- 275 (336)
Q Consensus 223 -----------------~~~~~~~~~~~~aa~~~l~~-----~~~~~~~~~~~~~~r~~l~~~l-~~lg~~~~~s~---- 275 (336)
....+.+.........+++. .+.+....+........+.+.+ ...+...+.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (416)
T 1qz9_A 261 RQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAK 340 (416)
T ss_dssp TTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGG
T ss_pred CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
T ss_conf 65212222100134023311583078999877678998740199999999999999999997412578825625887332
Q ss_pred -CCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC----CHHHHHHHHHHHHHHHHC
Q ss_conf -647886569889999999876938960778888874788747----989999999999999842
Q T0636 276 -ANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG----REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 276 -~~Fi~~~~~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~----~~ee~~~l~~aL~~~~e~ 335 (336)
+..+-+..++++.+.+.|.++||.+- +..+++||||++ |++|+++|+++|++++++
T Consensus 341 r~~~vs~~~~~~~~v~~~L~~~gI~~~----~r~~~~iRvS~~h~ynt~~dId~~i~~L~~~l~~ 401 (416)
T 1qz9_A 341 RGSHVSFEHPEGYAVIQALIDRGVIGD----YREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp BCSEEEEECTTHHHHHHHHHTTTEECE----EETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHCCCEEE----CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 246999837999999999987898973----2699879997997789999999999999999970
No 96
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.79 E-value=7.9e-18 Score=133.75 Aligned_cols=260 Identities=14% Similarity=0.159 Sum_probs=165.2
Q ss_pred HHHHHHHHHH-HHHH-----HC--CCCCCHHHHHHHHHHHHCCCHHHEE---EECCHHHHHHHHHHHH--CCCCEEEC-C
Q ss_conf 8999999999-8750-----05--8898618999999998488854388---6077889999999984--69925763-8
Q T0636 31 PRVQAAIAAA-AARI-----NR--YPFDAEPRVMRKLAEHFSCPEDNLM---LVRGIDECFDRISAEF--SSMRFVTA-W 96 (336)
Q Consensus 31 ~~v~~al~~~-~~~~-----~~--Ypd~~~~~Lr~aia~~~~v~~d~I~---~t~Gs~~~i~~~~~~~--~~~~vii~-~ 96 (336)
..|++|++++ +.+. .. |.|.+...|.+.+|+.+|-.. .++ +++| +.++..++.++ +||+|++. .
T Consensus 38 ~kVl~af~~~~vs~~~f~~s~GYgy~d~gre~LE~~~A~l~GaEa-Alvrp~f~SG-t~Ai~~al~alL~pGDeVI~~~g 115 (431)
T 3ht4_A 38 FRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEA-GLVRPQIISG-THAISTALFGILRPGDELLYITG 115 (431)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSE-ECCBTTSCSH-HHHHHHHHHTTCCTTCEEEECSS
T ss_pred HHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC-EEEECCCCCH-HHHHHHHHHHHCCCCCEEEEECC
T ss_conf 999999875531066505899987585149999999999729861-6763465776-99999999971789998999349
Q ss_pred CCCHHHHHHH----------HHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCC-CCCCCCCHHH---HHHHH
Q ss_conf 8735699999----------98188036415543567788999730--0024313303663-3222223799---99999
Q T0636 97 PGFDGYRARI----------AVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSN-PTGQALSAGE---LDQLR 160 (336)
Q Consensus 97 P~y~~y~~~~----------~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnN-PTG~~~~~~~---l~~l~ 160 (336)
+.|..+.... ...|+++..++...+...|++++++. .++|++++.+|+| +++..++.++ +.+++
T Consensus 116 ~~y~tl~~vig~~~~~~~~L~~~Gi~~~~v~~~~~~~~Dle~l~~aI~~~TklV~Ie~s~ny~~~p~~~i~dI~~I~~la 195 (431)
T 3ht4_A 116 KPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFV 195 (431)
T ss_dssp SCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred CCCCHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 87630210024101125668863944551145667744899999733887867999825776789977787799999999
Q ss_pred HHC--C-CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCE-EECCCHHHHHHHHHCCCCCCCCH---HHH
Q ss_conf 737--8-7202521002588662003324520012023465233434531-31178899999973378778777---789
Q T0636 161 QRA--G-KLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLG-ALFGPSELIAAMKRKQWFCNVGT---LDL 233 (336)
Q Consensus 161 ~~~--~-~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG-~~i~~~~~i~~l~~~~~~~~~~~---~~~ 233 (336)
+.+ + ++++|++|.+|..... ++...- -++++|+||.+|..|.++| |+++++++++++.......++.. .+.
T Consensus 196 k~~~~~viv~vDn~~g~~~~~~~-Pl~~Ga-Div~~SlsK~lgG~gap~GG~I~G~keLIe~~~~~ltapg~g~~~g~~~ 273 (431)
T 3ht4_A 196 KEIKPDVVVFVDNCYGEFIEEQE-PCHVGA-DLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASL 273 (431)
T ss_dssp HHHCTTCEEEEECTTCTTSSSCC-GGGTTC-SEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCC
T ss_pred HHHCCCCEEEEECCCCCCCCCCC-CHHHCC-CEEEEEEHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 97589988995466555322456-076477-7799970341677766655999828999999999842887554431377
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC-E--E--EEECCCHHHHHHHHH
Q ss_conf 99999974599999999999999999999998589786169864-7--8--865698899999998
Q T0636 234 HALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEAN-F--V--LVENAAGERTLRFLR 294 (336)
Q Consensus 234 ~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~-F--i--~~~~~~~~~~~~~L~ 294 (336)
......++.-....+...+..+.+..+.+.|+++|++|+|+.+. . + -+.+.+.+.+..+++
T Consensus 274 ~~~~~~~~gl~~ap~~~~~a~k~a~~~a~~le~lG~~v~P~~~~~~~dii~~~~~~~~~~~~~f~~ 339 (431)
T 3ht4_A 274 YSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQ 339 (431)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCEEECCCHHHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEECCCHHHHHHHHH
T ss_conf 899998615788999999999989999999997698307999998886589997599899999999
No 97
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, cytoplasm, one-carbon metabolism, pyridoxal phosphate; HET: MSE; 1.80A {Salmonella typhimurium} PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.78 E-value=4.5e-16 Score=122.38 Aligned_cols=321 Identities=16% Similarity=0.197 Sum_probs=195.1
Q ss_pred HHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCC----CCC----C--H-HH----HHHHHHHHHCCCHH
Q ss_conf 15789750366553573576548887689999999998750058----898----6--1-89----99999998488854
Q T0636 4 GEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRY----PFD----A--E-PR----VMRKLAEHFSCPED 68 (336)
Q Consensus 4 ~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Y----pd~----~--~-~~----Lr~aia~~~~v~~d 68 (336)
.++++++...-..-|.|--.||. ++|.+++++...+. ++| |.. | + .+ .++..++.+|.++.
T Consensus 19 ~~~~~~~~~r~~~~l~l~asen~--~s~~~~~~~~~~~~--~~y~~g~~~~r~~~G~~~~~~~E~la~e~~~~lfga~~a 94 (420)
T 3gbx_A 19 WQAMEQEKVRQEEHIELIASENY--TSPRVMQAQGSQLT--NKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYA 94 (420)
T ss_dssp HHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGG--GCCC--------------CHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHCCEEEECCCCC--CCHHHHHHHHHHHH--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 99999999998658578606887--99999999857762--536688997635576487999999999999998399964
Q ss_pred HEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHH---HHHHC--CCEEEECCCCCCCCCHHHHHHHC--CHHHHH
Q ss_conf 3886077889999999984--699257638873569999---99818--80364155435677889997300--024313
Q T0636 69 NLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRAR---IAVSG--LRHFEIGLTDDLLLDPNDLAQVS--RDDCVV 139 (336)
Q Consensus 69 ~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~---~~~~g--~~~~~vp~~~~~~~d~~~l~~~~--~~~~i~ 139 (336)
+|.+++|++. ...++.++ +||.|++.......+... +...+ .+++..+..+++.+|++++++.. .+..++
T Consensus 95 ~v~~~SGt~A-n~~~~~al~~pgd~il~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~~~l~~~~~~~~~~vi 173 (420)
T 3gbx_A 95 NVQPHSGSQA-NFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMI 173 (420)
T ss_dssp ECCCSSHHHH-HHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEE
T ss_pred EEEECCHHHH-HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEE
T ss_conf 8981888999-999999970899825446624799999999997548745786579772235389999985443698799
Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCCCC---CCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCC---
Q ss_conf 303663322222379999999737872-02521002---58866200332452001202346523343453131178---
Q T0636 140 LANPSNPTGQALSAGELDQLRQRAGKL-LIDETYVD---YSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGP--- 212 (336)
Q Consensus 140 l~nPnNPTG~~~~~~~l~~l~~~~~~~-IvDeaY~~---f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~--- 212 (336)
++.++|..+ ..+.++|.+++++++.+ ++|+++.- +.+....+.. .-+ +++.|++|+++-|| -|.++..
T Consensus 174 i~~~s~~~~-~~dl~~i~~ia~~~g~~l~~D~Ah~~G~~~~~~~~~~~~-~aD-i~s~s~hK~l~~~~--Gg~i~~~~~~ 248 (420)
T 3gbx_A 174 IGGFSAYSG-VVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAH-VVTTTTHKTLAGPR--GGLILAKGGD 248 (420)
T ss_dssp EECCTTCCS-CCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSS-EEEEESSGGGCSCS--CEEEEESSCC
T ss_pred EECCCCCCC-CCCHHHHHHHHHHCCCEEECCHHHHCCCCCCCCCCCCCC-EEE-EEEEECCCCCCCCC--CEEEEEECHH
T ss_conf 964787887-528999997787769789801233314514687788633-346-99932642357997--5699982508
Q ss_pred HHHHHHHHHCCCCC---CCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC--CCCCEEEEEC--
Q ss_conf 89999997337877---877778999999974--59999999999999999999999858978616--9864788656--
Q T0636 213 SELIAAMKRKQWFC---NVGTLDLHALEAALD--NDRAREAHIAKTLAQRRRVADALRGLGYRVAS--SEANFVLVEN-- 283 (336)
Q Consensus 213 ~~~i~~l~~~~~~~---~~~~~~~~aa~~~l~--~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~--s~~~Fi~~~~-- 283 (336)
.......+....+. +.......+...++. ..+...+..++.....+++.+.+...|+.+.+ ++.+.+|+.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~iaa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~~~~~~~v~~~~~~ 328 (420)
T 3gbx_A 249 EELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVD 328 (420)
T ss_dssp HHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGG
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
T ss_conf 89988740451673337856999999999999984744899999999999999988875497646899877489998378
Q ss_pred --CCHHHHHHHHHHCCCEEEECCCCC------CCCEEEEEEC-------CHHHHHHHHHHHHHHHH
Q ss_conf --988999999987693896077888------8874788747-------98999999999999984
Q T0636 284 --AAGERTLRFLRERGIQVKDAGQFG------LHHHIRISIG-------REEDNDRLLAALAEYSD 334 (336)
Q Consensus 284 --~~~~~~~~~L~~~gi~vr~~~~fg------~~~~iRis~~-------~~ee~~~l~~aL~~~~e 334 (336)
.+++.+.+.|.++||.+.....++ .+..+||++. +++|++++.+.+.++.+
T Consensus 329 ~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~lRig~~~~tt~G~~e~d~~~ia~~i~~~l~ 394 (420)
T 3gbx_A 329 KNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLD 394 (420)
T ss_dssp GTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEECCCHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 898999999999977898875777798677667774240460654079998999999999999996
No 98
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.78 E-value=1.2e-15 Score=119.75 Aligned_cols=309 Identities=14% Similarity=0.130 Sum_probs=184.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCC-CC--CCHHHHHHHHHHHHCC----CHHHEEEECCHHHHHHHHHHHH-----
Q ss_conf 3576548887689999999998750058-89--8618999999998488----8543886077889999999984-----
Q T0636 20 LAFNENPEAVEPRVQAAIAAAAARINRY-PF--DAEPRVMRKLAEHFSC----PEDNLMLVRGIDECFDRISAEF----- 87 (336)
Q Consensus 20 L~~Nenp~~p~~~v~~al~~~~~~~~~Y-pd--~~~~~Lr~aia~~~~v----~~d~I~~t~Gs~~~i~~~~~~~----- 87 (336)
.=++.-|.+.|+.|++||... .++.+ |+ .-..++++.+.+.++. +.+.|++|.++++++..++..+
T Consensus 7 ~l~~PGP~~v~~~V~~Am~~~--~~~hr~~ef~~~~~~~~~~lr~~~~~~~~~~~~~v~~tgsgT~a~e~~~~~l~~~~~ 84 (385)
T 2bkw_A 7 TLLIPGPIILSGAVQKALDVP--SLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKA 84 (385)
T ss_dssp EECSSSSCCCCHHHHHTTSCC--CCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTC
T ss_pred CCCCCCCCCCCHHHHHHHCCC--CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC
T ss_conf 121489978889999974746--889788999999999999999998201588872999938689999999998632237
Q ss_pred CCCCEEECCCCCHHH--HHHHHHHCCCEEEECC-CCCCCCCHHHHHHH---CCHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 699257638873569--9999981880364155-43567788999730---00243133036633222223799999997
Q T0636 88 SSMRFVTAWPGFDGY--RARIAVSGLRHFEIGL-TDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQ 161 (336)
Q Consensus 88 ~~~~vii~~P~y~~y--~~~~~~~g~~~~~vp~-~~~~~~d~~~l~~~---~~~~~i~l~nPnNPTG~~~~~~~l~~l~~ 161 (336)
+||+|++..=++.+. ...++.+|.++..+.. +....+|++++++. .+++++.++..+|.||...+.++|.++++
T Consensus 85 ~gd~vlv~~~g~~~~~~~~~a~~~g~~~~~v~~~~~g~~~~~~~l~~~i~~~~~~~v~~~h~etstG~~~pi~~I~~~~~ 164 (385)
T 2bkw_A 85 PNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIK 164 (385)
T ss_dssp SCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 99826898420355677777665431133322345787576467999740577439999622112220367202345554
Q ss_pred HCC---CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHC-CCCCCCEEECCCHHHHHHHHH----------------
Q ss_conf 378---720252100258866200332452001202346523-343453131178899999973----------------
Q T0636 162 RAG---KLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYG-LAGLRLGALFGPSELIAAMKR---------------- 221 (336)
Q Consensus 162 ~~~---~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~g-l~GlRiG~~i~~~~~i~~l~~---------------- 221 (336)
+++ +++||.+- .++..+...-.+.-+ +++.|--|.++ -|| +|+++.+++.++.+..
T Consensus 165 ~~g~~~l~vvDa~~-s~G~~pid~~~~~iD-~~~~s~~K~l~gP~G--~g~l~~s~~~~~~~~~~~~~~~~~~~~~~l~~ 240 (385)
T 2bkw_A 165 QTSPETFFVVDAVC-SIGCEEFEFDEWGVD-FALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRR 240 (385)
T ss_dssp HHCTTSEEEEECTT-TTTTSCCCTTTTTCS-EEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHH
T ss_pred HCCCCEEEEEECCC-CHHEEECCCCCCCEE-EEEECCCCCCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 04760367730223-200232035555338-999547764457875--00677429987422201358888742010100
Q ss_pred ------------CCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH-CCCEEE---CCC--CC-EEE
Q ss_conf ------------37877877778999999974599--9999999999999999999985-897861---698--64-788
Q T0636 222 ------------KQWFCNVGTLDLHALEAALDNDR--AREAHIAKTLAQRRRVADALRG-LGYRVA---SSE--AN-FVL 280 (336)
Q Consensus 222 ------------~~~~~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~r~~l~~~l~~-lg~~~~---~s~--~~-Fi~ 280 (336)
...+++.+.....+..++|+.-. =++...++....++++.+.|.+ +++... ++. .+ ..-
T Consensus 241 ~~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~i~~~G~~~~~~r~~~l~~~l~~~L~~~l~~~~~~~~~~~~~~~~v~~ 320 (385)
T 2bkw_A 241 WTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTA 320 (385)
T ss_dssp HHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEE
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
T ss_conf 35777642025677777788799999999999998666677659999999999973332035433235854456775698
Q ss_pred EECCCHHHHHHHHHHCCCEEEECCCCCC-CCEEEEE-EC---CHHHHHHHH---HHHHHHHH
Q ss_conf 6569889999999876938960778888-8747887-47---989999999---99999984
Q T0636 281 VENAAGERTLRFLRERGIQVKDAGQFGL-HHHIRIS-IG---REEDNDRLL---AALAEYSD 334 (336)
Q Consensus 281 ~~~~~~~~~~~~L~~~gi~vr~~~~fg~-~~~iRis-~~---~~ee~~~l~---~aL~~~~e 334 (336)
+..+++.++.++|+++||.+.+|....+ .+.+||+ +| +.+++++++ ++|++-++
T Consensus 321 ~~~p~~~d~~~~L~~~gi~i~~G~~~~~~~~~~RIg~mG~~~~~~~i~~~~~~l~~l~~~L~ 382 (385)
T 2bkw_A 321 VYVADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp EECSCHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred EECCCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 71798799999999789399766760017998988188588857799999999999999997
No 99
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain closure; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 1tpl_A 2tpl_A* 1c7g_A*
Probab=99.77 E-value=2.3e-15 Score=117.77 Aligned_cols=309 Identities=15% Similarity=0.117 Sum_probs=180.8
Q ss_pred CEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHC--CCCEE
Q ss_conf 35735765488876899999999987500588-9861899999999848885438860778899999999846--99257
Q T0636 17 AVCLAFNENPEAVEPRVQAAIAAAAARINRYP-FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEFS--SMRFV 93 (336)
Q Consensus 17 ~i~L~~Nenp~~p~~~v~~al~~~~~~~~~Yp-d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~~--~~~vi 93 (336)
.|||-+-.-.-++++....++. +. -..|. |++..+|.+++|+++|. +.++.+++++.+.+++++++. |+.|+
T Consensus 44 ~iDl~sDs~t~am~~~~~aa~~--~G-Dd~Y~~dpt~~~Le~~va~l~G~--e~al~~~sGt~An~~a~~~l~~~gd~Vi 118 (456)
T 2ez2_A 44 YIDLLTDSGTNAMSDKQWAGMM--MG-DEAYAGSENFYHLERTVQELFGF--KHIVPTHQGRGAENLLSQLAIKPGQYVA 118 (456)
T ss_dssp SEECSCSSSCCCCCHHHHHHHT--TC-CCCSSSCHHHHHHHHHHHHHHCC--SEEEEESSHHHHHHHHHHHHCCTTCEEE
T ss_pred EEECCCCCCCCCCCHHHHHHHH--CC-CCCCCCCCCHHHHHHHHHHHHCC--CEEEECCCHHHHHHHHHHHHCCCCCEEC
T ss_conf 5776347896556698999987--17-84306895299999999998699--8699899879999999998258997772
Q ss_pred ECCCCCHHHHHHHHHHCCCEEEECCC----------CCCCCCHHHHHHHCC------HHHHHHHCCCCCC-CCCCCHHHH
Q ss_conf 63887356999999818803641554----------356778899973000------2431330366332-222237999
Q T0636 94 TAWPGFDGYRARIAVSGLRHFEIGLT----------DDLLLDPNDLAQVSR------DDCVVLANPSNPT-GQALSAGEL 156 (336)
Q Consensus 94 i~~P~y~~y~~~~~~~g~~~~~vp~~----------~~~~~d~~~l~~~~~------~~~i~l~nPnNPT-G~~~~~~~l 156 (336)
... .|..+.......|...+.+... .++.+|++++++..+ ..++++.++||.. |++++.++|
T Consensus 119 ~~~-~f~~t~~~i~~~g~~~~~~~~~~~~~~~~~~~~~g~~d~~~l~~~i~~~~~~~~~~v~~~~~~n~~gG~~~~~~~l 197 (456)
T 2ez2_A 119 GNM-YFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANM 197 (456)
T ss_dssp ESS-CCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHH
T ss_pred CCC-CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCHHHH
T ss_conf 672-5588899999779748988733332566556888881999999985033876235899610112486320799999
Q ss_pred H---HHHHHCCCC-CCCCCCC------------CCCCCCCCHHH----HCCCHHHHHHHHHHHCCCCCCCEEECCC-HHH
Q ss_conf 9---999737872-0252100------------25886620033----2452001202346523343453131178-899
Q T0636 157 D---QLRQRAGKL-LIDETYV------------DYSSFRARGLA----YGENELVFRSFSKSYGLAGLRLGALFGP-SEL 215 (336)
Q Consensus 157 ~---~l~~~~~~~-IvDeaY~------------~f~~~~~~~l~----~~~n~iv~~S~SK~~gl~GlRiG~~i~~-~~~ 215 (336)
. ++|+++++. ++|+|-. .|.+.+...+. .+-+ ++..|++|.++ |.+.|+++.+ +++
T Consensus 198 ~~i~~ia~~~gi~l~~D~ar~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~d-~~s~s~~K~~~--~~~GG~l~~~~~~~ 274 (456)
T 2ez2_A 198 RAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYAD-GCTMSGKKDCL--VNIGGFLCMNDDEM 274 (456)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS-EEEEETTTTTC--CSSCEEEEESCHHH
T ss_pred HHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC-EEEEECCCCCC--CCCCEEEEECCHHH
T ss_conf 9999999975986998727764125553035544479867665555404676-89983775534--67521798378999
Q ss_pred HHHHHHCC---CCC---C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC-CCCCEEEEEC----
Q ss_conf 99997337---877---8-7777899999997459999999999999999999999858978616-9864788656----
Q T0636 216 IAAMKRKQ---WFC---N-VGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVAS-SEANFVLVEN---- 283 (336)
Q Consensus 216 i~~l~~~~---~~~---~-~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~-s~~~Fi~~~~---- 283 (336)
.++++... ..+ + .......++...|... ..++.+++..+..++|.+.|++.|+.+.+ .++++++++.
T Consensus 275 ~~~~r~~~~~~~g~~~~g~~~~~~~~a~avgl~e~-~~~~~l~~r~~~~~~L~~~L~~~g~~~v~p~g~~~v~vd~~~~~ 353 (456)
T 2ez2_A 275 FSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREA-MQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFC 353 (456)
T ss_dssp HHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHT
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHC
T ss_conf 99997335523687632078888999999899885-05999999999999999999856996115788743566415445
Q ss_pred C---C----HHH-HHHHHHHCCCEEEECCC-------------CCCCCEEEEEEC----CHHHHHHHHHHHHHHHHC
Q ss_conf 9---8----899-99999876938960778-------------888874788747----989999999999999842
Q T0636 284 A---A----GER-TLRFLRERGIQVKDAGQ-------------FGLHHHIRISIG----REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 284 ~---~----~~~-~~~~L~~~gi~vr~~~~-------------fg~~~~iRis~~----~~ee~~~l~~aL~~~~e~ 335 (336)
+ . +.. +...+.+.||...+... +...+.+|+|+. |.++++..+++|+++.++
T Consensus 354 ~~i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLalpr~~~T~e~IDyVve~l~~v~~~ 430 (456)
T 2ez2_A 354 EHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp TTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 89861113478999999996394323576665675777677777754517975788889999999999999999972
No 100
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase, propargylglycine; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.76 E-value=3e-15 Score=117.03 Aligned_cols=272 Identities=14% Similarity=0.161 Sum_probs=162.0
Q ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHH----HHHHHHCCCEEEECCCCCC
Q ss_conf 986189999999984888543886077889999999984--6992576388735699----9999818803641554356
Q T0636 49 FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYR----ARIAVSGLRHFEIGLTDDL 122 (336)
Q Consensus 49 d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~----~~~~~~g~~~~~vp~~~~~ 122 (336)
.|....|.+++|+..|-. .-++++.++.++..++.++ +||+|++....|.... ..+...|+++..++..
T Consensus 61 nPt~~~LE~~lA~leg~e--~al~~sSGmaAi~~al~all~~GD~vv~~~~~~~~t~~~~~~~~~~~gv~v~~~d~~--- 135 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA--- 135 (404)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT---
T ss_pred CHHHHHHHHHHHHHHCCC--EEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCC---
T ss_conf 868999999999986998--299977999999999999857999899827975068999998763468699975999---
Q ss_pred CCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHH-CCCC-CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHH
Q ss_conf 7788999730--002431330366332222237999999973-7872-02521002588662003324520012023465
Q T0636 123 LLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQR-AGKL-LIDETYVDYSSFRARGLAYGENELVFRSFSKS 198 (336)
Q Consensus 123 ~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~-~~~~-IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~ 198 (336)
|++++++. .++++|++-+|.||||.+.+.++|.+++++ ++.+ ++|..+...... .++...-+ +++.|+||.
T Consensus 136 --d~e~i~~ai~~~tklV~~E~psnp~~~v~Di~~ia~iA~~~~g~~vvvD~t~a~~~~~--~p~~~GaD-ivv~S~tK~ 210 (404)
T 1e5e_A 136 --IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMIT--NPVDFGVD-VVVHSATKY 210 (404)
T ss_dssp --STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTC--CGGGGTCS-EEEEETTTT
T ss_pred --CHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEC--CCCCCCEE-EEECCCCCC
T ss_conf --9999997467788689996898988751489999999634269589997897875212--54301337-998257333
Q ss_pred HCCC-CCCCEEECCCHHHHHHHHHC--CCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EE
Q ss_conf 2334-34531311788999999733--78778--777789999999745999999999999999999999985897--86
Q T0636 199 YGLA-GLRLGALFGPSELIAAMKRK--QWFCN--VGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY--RV 271 (336)
Q Consensus 199 ~gl~-GlRiG~~i~~~~~i~~l~~~--~~~~~--~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~ 271 (336)
+|-. +.--|+++++++.++.++.. +...+ ++..........++ -+..+.++..++-.++.+.|++... +|
T Consensus 211 l~Gh~d~~gG~v~~~~~~i~~~r~~~~~~~~G~~l~p~~A~ll~rgl~---tl~~R~~~~~~nA~~la~~L~~~p~V~~V 287 (404)
T 1e5e_A 211 INGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLS---TLNIRMKAESENAMKVAEYLKSHPAVEKV 287 (404)
T ss_dssp TTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred CCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 678888435897242315999999998636688589899999980589---78999999999999999999849993167
Q ss_pred E-CC----------------CCCEEEEECCCHHH-HHHHHHHCCCE------------EE-ECC------------CCCC
Q ss_conf 1-69----------------86478865698899-99999876938------------96-077------------8888
Q T0636 272 A-SS----------------EANFVLVENAAGER-TLRFLRERGIQ------------VK-DAG------------QFGL 308 (336)
Q Consensus 272 ~-~s----------------~~~Fi~~~~~~~~~-~~~~L~~~gi~------------vr-~~~------------~fg~ 308 (336)
+ |+ .|..+-+.+.++.+ ..+++..-.++ +- |.. ..|+
T Consensus 288 ~yp~l~s~p~~~~~~~~~~g~g~~~sf~~~~~~~~a~~f~~~l~l~~~~~slG~~~sLi~~~a~~~h~~~~~~~~~~~Gi 367 (404)
T 1e5e_A 288 YYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGI 367 (404)
T ss_dssp ECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTC
T ss_pred ECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCC
T ss_conf 46888888319999975668986138887686999999997288554855677775044486200553389999997698
Q ss_pred -CCEEEEEECCH--HH-HHHHHHHHHHHH
Q ss_conf -87478874798--99-999999999998
Q T0636 309 -HHHIRISIGRE--ED-NDRLLAALAEYS 333 (336)
Q Consensus 309 -~~~iRis~~~~--ee-~~~l~~aL~~~~ 333 (336)
++.||||+|.+ ++ .+.|.+||+..+
T Consensus 368 ~~~liRlSvGlE~~~dLi~Dl~~AL~a~~ 396 (404)
T 1e5e_A 368 TDGMIRLSVGIEDADELIADFKQGLDALL 396 (404)
T ss_dssp CTTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 93949999256999999999999999998
No 101
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, structural genomics, JCSG, PSI, protein structure initiative; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.76 E-value=4e-15 Score=116.23 Aligned_cols=310 Identities=16% Similarity=0.152 Sum_probs=180.1
Q ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHCC-CC--CCHHHHHHHHHHHHCCCHH-HEEEECCHHHHHHHHHHHH--CCCCE
Q ss_conf 73576548887689999999998750058-89--8618999999998488854-3886077889999999984--69925
Q T0636 19 CLAFNENPEAVEPRVQAAIAAAAARINRY-PF--DAEPRVMRKLAEHFSCPED-NLMLVRGIDECFDRISAEF--SSMRF 92 (336)
Q Consensus 19 ~L~~Nenp~~p~~~v~~al~~~~~~~~~Y-pd--~~~~~Lr~aia~~~~v~~d-~I~~t~Gs~~~i~~~~~~~--~~~~v 92 (336)
++-++.-|-+.||.|++||... .++.+ ++ .-..+.|+.+++.+|++.+ .|+++.|+++++..++..+ +++.+
T Consensus 35 ~~l~~PGP~~~~~~Vl~Am~~~--~~~HR~~~f~~l~~ear~~L~~ll~~~~~~~i~~~g~gT~a~~a~i~~l~~~~~~~ 112 (393)
T 1vjo_A 35 RLLLGPGPSNAHPSVLQAMNVS--PVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVV 112 (393)
T ss_dssp CEECSSSCCCCCHHHHHHHSSC--CCCTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred CEECCCCCCCCCHHHHHHHCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCC
T ss_conf 6501389988989999975768--99978689999999999999999589998289988829999999999764035664
Q ss_pred EECCCCCHHHH--HHHHHHCCCEEEECCCCCCCCCHHHHH---HHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-C
Q ss_conf 76388735699--999981880364155435677889997---30002431330366332222237999999973787-2
Q T0636 93 VTAWPGFDGYR--ARIAVSGLRHFEIGLTDDLLLDPNDLA---QVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-L 166 (336)
Q Consensus 93 ii~~P~y~~y~--~~~~~~g~~~~~vp~~~~~~~d~~~l~---~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~ 166 (336)
++..-++.... ......+..+..+....+...+.+... ...+++++.+++-+|.||...+.+++.+++++.+. +
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~ 192 (393)
T 1vjo_A 113 LIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLL 192 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEE
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCEE
T ss_conf 53101100001245665422221000357787441135567650686400266664320223465365432342056507
Q ss_pred CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC---------------------
Q ss_conf 02521002588662003324520012023465233434531311788999999733787---------------------
Q T0636 167 LIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF--------------------- 225 (336)
Q Consensus 167 IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~--------------------- 225 (336)
++|.+.. ++ .....+...+--++..|--|.++.|+ =+|+++..+..++.+......
T Consensus 193 ivDa~~s-~g-~~~~~~d~~~~D~~~~s~~K~~~gp~-G~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (393)
T 1vjo_A 193 LVDTVTS-LG-GVPIFLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVY 269 (393)
T ss_dssp EEECTTT-TT-TSCCCTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCC
T ss_pred EEEECCC-CC-CEEECCCCCCCCEEEECCCCCCCCCC-EEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 8970135-54-01001224567256302222457997-478342304577654214788664330134444311545666
Q ss_pred -CCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC-----CCCC-EEEE-ECCCHHHHHHHHH-
Q ss_conf -78777789999999745--9999999999999999999999858978616-----9864-7886-5698899999998-
Q T0636 226 -CNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGLGYRVAS-----SEAN-FVLV-ENAAGERTLRFLR- 294 (336)
Q Consensus 226 -~~~~~~~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~-----s~~~-Fi~~-~~~~~~~~~~~L~- 294 (336)
.+.+.....+...++.. ..-.+...++.......+.+.+...|+.... |.++ .+.+ +..++.++.+.|.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~~~~~~l~~~L~~ 349 (393)
T 1vjo_A 270 HHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLN 349 (393)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHH
T ss_pred CCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf 88763432333678888776426335544201133434545423781682683870975999989999899999999986
Q ss_pred HCCCEEEECCCCCCCCEEEEE-EC---CHHHHHHHHHHHHHHH
Q ss_conf 769389607788888747887-47---9899999999999998
Q T0636 295 ERGIQVKDAGQFGLHHHIRIS-IG---REEDNDRLLAALAEYS 333 (336)
Q Consensus 295 ~~gi~vr~~~~fg~~~~iRis-~~---~~ee~~~l~~aL~~~~ 333 (336)
++||.++.|...--.+.+||| +| |+|++++|+++|++++
T Consensus 350 ~~gI~v~~G~~~~~g~~~Ris~~g~~~t~edv~~lv~aL~~vL 392 (393)
T 1vjo_A 350 EHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp HHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 4998996686122699899836667899999999999999985
No 102
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, pyridoxal-5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis S2} SCOP: c.67.1.9
Probab=99.76 E-value=3.6e-15 Score=116.52 Aligned_cols=269 Identities=10% Similarity=0.021 Sum_probs=164.8
Q ss_pred HHCCCHHHEEEECCHH-HHHHHHHHHH----CCCCEEECCCCCHHHHHHHHHHCCCEEEECC---CCCCCCCHHHHHHHC
Q ss_conf 8488854388607788-9999999984----6992576388735699999981880364155---435677889997300
Q T0636 62 HFSCPEDNLMLVRGID-ECFDRISAEF----SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL---TDDLLLDPNDLAQVS 133 (336)
Q Consensus 62 ~~~v~~d~I~~t~Gs~-~~i~~~~~~~----~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~---~~~~~~d~~~l~~~~ 133 (336)
..|.+...+++ +|++ ..+.+++.++ +++.|+++.-.-.....++..+|.+.+.++. ++.+.+|++++++..
T Consensus 145 ~~g~~~~~~~~-~~~tG~~~~l~l~a~~~~~~~~~Vi~~~~~H~S~~kai~~aG~~~v~v~~~~~~~~~~~d~~~le~~i 223 (456)
T 2z67_A 145 QLGLNVHAIAT-PISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAI 223 (456)
T ss_dssp HTTCCCEEEEE-SSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHH
T ss_pred HHCCCCCEEEC-CCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEECEECCCCCCCCHHHHHHHH
T ss_conf 84899607874-76749999999999631689998997262167799999986997999836223623576999999999
Q ss_pred C--H--HH---HHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHH--CCC-HHHHHHHHHHHCCC
Q ss_conf 0--2--43---1330366332222237999999973787-20252100258866200332--452-00120234652334
Q T0636 134 R--D--DC---VVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAY--GEN-ELVFRSFSKSYGLA 202 (336)
Q Consensus 134 ~--~--~~---i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~--~~n-~iv~~S~SK~~gl~ 202 (336)
+ + +. ++.++|++++|..-+.++|.+|+++++. +++|+||..+.......+.. ..+ -+++.|+.|.++.|
T Consensus 224 ~~~~~~~~i~~v~~t~~~~~~g~~ddi~eIa~l~~~~gi~livD~A~g~~~~~~~~~~~~~~~~gvD~vv~S~hK~l~~p 303 (456)
T 2z67_A 224 KKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTP 303 (456)
T ss_dssp HHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCC
T ss_pred HHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCHHCCCCCCCCCCHHHCCCCEEEECCCCCCCCC
T ss_conf 85735482699982689878886247999999999809979998987100103444541022168758997187666678
Q ss_pred CCCCEEECCCHHHHHHHHHCCCCCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCEEECCCC
Q ss_conf 34531311788999999733787787777899--99999745999999999999999999999985----8978616986
Q T0636 203 GLRLGALFGPSELIAAMKRKQWFCNVGTLDLH--ALEAALDNDRAREAHIAKTLAQRRRVADALRG----LGYRVASSEA 276 (336)
Q Consensus 203 GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~--aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~----lg~~~~~s~~ 276 (336)
.-.-++.+.+++.++.+.+....+..+++... +....+. .+-+++..++..+.++++.+.|++ .|+++.+...
T Consensus 304 ~G~g~v~~~~~~~~~~v~~~~~~~~~~s~~~~~~a~l~~~g-~~~~~~~~~~~~~~~~~l~~~L~~l~~~~g~~i~~~~~ 382 (456)
T 2z67_A 304 IGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-SKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVES 382 (456)
T ss_dssp SSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCCC
T ss_pred CCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
T ss_conf 78139997787799999987226888727999999999998-86105689999999999999997403447805367888
Q ss_pred C---EEEEECCCHHHHHHHHHHCCCEEE----ECCC-------CCCCCEEEEEEC---CHHHHHHHHHHHHHHH
Q ss_conf 4---788656988999999987693896----0778-------888874788747---9899999999999998
Q T0636 277 N---FVLVENAAGERTLRFLRERGIQVK----DAGQ-------FGLHHHIRISIG---REEDNDRLLAALAEYS 333 (336)
Q Consensus 277 ~---Fi~~~~~~~~~~~~~L~~~gi~vr----~~~~-------fg~~~~iRis~~---~~ee~~~l~~aL~~~~ 333 (336)
. ++.. ..+...+...|.+.||... +... +....|+|++.+ |+||+++|+++|++++
T Consensus 383 ~i~~~i~~-~~d~~~l~~~L~~~gVsG~~v~~~~~~~g~~~~~~~~~~yl~~~~sig~T~eDId~~v~~L~kiL 455 (456)
T 2z67_A 383 PIASCISV-NSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp SSEEEEEC-SSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred CCEEEEEC-CCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 75010112-66889999999975981578876321048068521577808998248999999999999998975
No 103
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.75 E-value=7.8e-16 Score=120.86 Aligned_cols=307 Identities=14% Similarity=0.087 Sum_probs=189.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCC-CC--CCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECC
Q ss_conf 76548887689999999998750058-89--86189999999984888543886077889999999984--699257638
Q T0636 22 FNENPEAVEPRVQAAIAAAAARINRY-PF--DAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAW 96 (336)
Q Consensus 22 ~Nenp~~p~~~v~~al~~~~~~~~~Y-pd--~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~ 96 (336)
++.-|.+.|+.|++|+.... ++.+ ++ .-..+.++.+++.++.+.+.|+++.|+++++..++..+ +|+++++..
T Consensus 5 ~~PGP~~~~~~V~~Am~~~~--~~hr~~~f~~~~~~~~~~l~~ll~~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vl~~~ 82 (352)
T 1iug_A 5 LTPGPVRLHPKALEALARPQ--LHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPV 82 (352)
T ss_dssp CSSSSCCCCHHHHHHHHSCC--CCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHCCCC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 77999999899999866787--8978899999999999999999689996899968469999999997435688569984
Q ss_pred CCCHH--HHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC---CCCCCCC
Q ss_conf 87356--999999818803641554356778899973000243133036633222223799999997378---7202521
Q T0636 97 PGFDG--YRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAG---KLLIDET 171 (336)
Q Consensus 97 P~y~~--y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~---~~IvDea 171 (336)
=+..+ ....++.+|..+..+..+.+..++.++++ ..+++.++++...+.||...+.+++..+++.++ ++++|.+
T Consensus 83 ~G~fg~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~v~~~h~etstG~~~~i~~i~~~~~~~~~~~l~~vDav 161 (352)
T 1iug_A 83 YGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVA-KEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMV 161 (352)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSC-CSSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHC-CCCCCEEEEEECCCCCEEECCHHHHHHHHHHHCCCCCEECHHH
T ss_conf 271487899999980886422312257655413303-6788748999316864133437889998763000233100011
Q ss_pred CCCCCCCCCCHHHHCCCHHHHHHHHHHH-CCCCCCCEEECCCHHHHHHHHH----------------CCCCCCCCHHHHH
Q ss_conf 0025886620033245200120234652-3343453131178899999973----------------3787787777899
Q T0636 172 YVDYSSFRARGLAYGENELVFRSFSKSY-GLAGLRLGALFGPSELIAAMKR----------------KQWFCNVGTLDLH 234 (336)
Q Consensus 172 Y~~f~~~~~~~l~~~~n~iv~~S~SK~~-gl~GlRiG~~i~~~~~i~~l~~----------------~~~~~~~~~~~~~ 234 (336)
- .|+......-.+.-++ ++.|--|.+ |.||+ |+++.+++.++++.. -..+++.+.....
T Consensus 162 s-s~g~~~~~~d~~~iD~-~~~s~qK~l~gp~G~--~~v~~s~~~le~~~~~~~~~dl~~~~~~~~~g~~~~Tp~v~~i~ 237 (352)
T 1iug_A 162 T-SLLVGEVALEAMGVDA-AASGSQKGLMCPPGL--GFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVL 237 (352)
T ss_dssp T-TBTTBCCCSGGGTCSE-EEEESSSTTCCCSCE--EEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHH
T ss_pred C-CCCCCCCCCCCCCCCE-EEECCCCCCCCCCCC--CCHHCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 1-4433321024668887-996576642469970--21005899998620777767799998654348988767537999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CC-EEEEECC---CHHHHHHHHHHCCCEEEECCCCCC
Q ss_conf 999997459-99999999999999999999985897861698-64-7886569---889999999876938960778888
Q T0636 235 ALEAALDND-RAREAHIAKTLAQRRRVADALRGLGYRVASSE-AN-FVLVENA---AGERTLRFLRERGIQVKDAGQFGL 308 (336)
Q Consensus 235 aa~~~l~~~-~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~-Fi~~~~~---~~~~~~~~L~~~gi~vr~~~~fg~ 308 (336)
+..++|+.. +...++.+.....++.+.+.....|++..+.. ++ -..+..| ++.++.+.|.++||.+.+|...--
T Consensus 238 al~~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~s~~v~~~~~p~g~~~~~~~~~l~~~gi~i~~G~~~l~ 317 (352)
T 1iug_A 238 AVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGPLK 317 (352)
T ss_dssp HHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCC
T ss_conf 99999999998868999999998877777998568665753469946999799999999999999977929976773137
Q ss_pred CCEEEEE-EC--CHHHHHHHHHHHHHHHHC
Q ss_conf 8747887-47--989999999999999842
Q T0636 309 HHHIRIS-IG--REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 309 ~~~iRis-~~--~~ee~~~l~~aL~~~~e~ 335 (336)
.+.+||+ +| +++++++++++|++.+++
T Consensus 318 ~~~~RIg~mG~~~~~di~~~~~~l~~~l~~ 347 (352)
T 1iug_A 318 GKVFRLSLMGAYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp TTEEEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 968988689999999999999999999999
No 104
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.74 E-value=1.5e-15 Score=118.97 Aligned_cols=306 Identities=16% Similarity=0.196 Sum_probs=182.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCC-C--CCCHHHHHHHHHHHHCCCHHH--EEEECCHHHHHHHHHHHH--CCCCEEE
Q ss_conf 76548887689999999998750058-8--986189999999984888543--886077889999999984--6992576
Q T0636 22 FNENPEAVEPRVQAAIAAAAARINRY-P--FDAEPRVMRKLAEHFSCPEDN--LMLVRGIDECFDRISAEF--SSMRFVT 94 (336)
Q Consensus 22 ~Nenp~~p~~~v~~al~~~~~~~~~Y-p--d~~~~~Lr~aia~~~~v~~d~--I~~t~Gs~~~i~~~~~~~--~~~~vii 94 (336)
+..-|-+.++.|++||.... .+.+ + ..-..+.|+.+++++|++++. |++|.|+++++.+++..+ +++.+++
T Consensus 8 ~~PGP~~v~~~V~~Am~~~~--~~~~s~~~~~~~~~~r~~l~~ll~~~~~~~~v~~t~s~T~a~~~~~~~l~~~~~~~~~ 85 (366)
T 1m32_A 8 LTPGPLTTSRTVKEAMLFDS--CTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLI 85 (366)
T ss_dssp CSSSSCCCCHHHHHTTCCCC--CTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEE
T ss_pred ECCCCCCCCHHHHHHHCHHC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEE
T ss_conf 47898878899999855533--6988689999999999999998098999889998987999999999987752352135
Q ss_pred -CCCCCHH-HHHHHHHHCCCEEEECCCCCCCCCHHHHH----HHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CC
Q ss_conf -3887356-99999981880364155435677889997----30002431330366332222237999999973787-20
Q T0636 95 -AWPGFDG-YRARIAVSGLRHFEIGLTDDLLLDPNDLA----QVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LL 167 (336)
Q Consensus 95 -~~P~y~~-y~~~~~~~g~~~~~vp~~~~~~~d~~~l~----~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~I 167 (336)
..-.|.. ........+..............+.+... ...+++++.++.=+|-||...+.+++.+++++++. ++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~v~~i~~~~~~~g~~~~ 165 (366)
T 1m32_A 86 VSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYI 165 (366)
T ss_dssp EESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEE
T ss_pred EECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECEECHHCEEEEHHHHHHHHHCCCCEEE
T ss_conf 54262166899999984777534445778777702678886069881599996503310353411134443313697068
Q ss_pred CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH-CCCCCCCEEECCCHHHHHHHHH--------------------CCCCC
Q ss_conf 25210025886620033245200120234652-3343453131178899999973--------------------37877
Q T0636 168 IDETYVDYSSFRARGLAYGENELVFRSFSKSY-GLAGLRLGALFGPSELIAAMKR--------------------KQWFC 226 (336)
Q Consensus 168 vDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~-gl~GlRiG~~i~~~~~i~~l~~--------------------~~~~~ 226 (336)
+|.+..- +..+.. +....--++..|--|.+ |-+| +|++..+++..+.... ....+
T Consensus 166 vDa~qs~-G~~~~d-~~~~~~D~~~~~~~K~l~gP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (366)
T 1m32_A 166 VDAMSSF-GGIPMD-IAALHIDYLISSANKCIQGVPG--FAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRF 241 (366)
T ss_dssp EECTTTT-TTSCCC-TTTTTCSEEEEESSSTTCCCSS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSS
T ss_pred EECCCCC-CCCCEE-EECCCCHHHHHHCCCCCCCCCC--EEEEHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCC
T ss_conf 8631245-763201-1001000211221567789998--88613049999844056898663112222012235676567
Q ss_pred CCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-----C--CEEEEEC--CCHHHHHHHHH
Q ss_conf 877778999999974---5999999999999999999999985897861698-----6--4788656--98899999998
Q T0636 227 NVGTLDLHALEAALD---NDRAREAHIAKTLAQRRRVADALRGLGYRVASSE-----A--NFVLVEN--AAGERTLRFLR 294 (336)
Q Consensus 227 ~~~~~~~~aa~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-----~--~Fi~~~~--~~~~~~~~~L~ 294 (336)
+.+.....+...++. +........++.....+.+.+.++..|+...... + .|.+-+. .+...+.+.|.
T Consensus 242 t~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~s~~v~~~~~p~~~~~~~~~~~~~L~ 321 (366)
T 1m32_A 242 TSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLK 321 (366)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 67426778999999999984359999999999998888788715986357835539967999899988878999999999
Q ss_pred HCCCEEEECCCCCCCCEEEEEE-C--CHHHHHHHHHHHHHHHH
Q ss_conf 7693896077888887478874-7--98999999999999984
Q T0636 295 ERGIQVKDAGQFGLHHHIRISI-G--REEDNDRLLAALAEYSD 334 (336)
Q Consensus 295 ~~gi~vr~~~~fg~~~~iRis~-~--~~ee~~~l~~aL~~~~e 334 (336)
++||.+..|.. ...+.+|||. | +++|+++++++|++.+.
T Consensus 322 ~~giiv~~G~~-~~~~~~Ris~~g~~~~~di~~~~~al~~~L~ 363 (366)
T 1m32_A 322 EQGFVIYPGKV-SQSDCFRIGNIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp HTTEECEECCC-SSSCEEEEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred HCCEEEECCCC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 78909978986-8899899837888999999999999999844
No 105
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.72 E-value=2.6e-14 Score=111.01 Aligned_cols=293 Identities=16% Similarity=0.201 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCCCEEECCCCCHHHHHHHH
Q ss_conf 9999999998750058898-6189999999984888543886077889999999984---69925763887356999999
Q T0636 32 RVQAAIAAAAARINRYPFD-AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSMRFVTAWPGFDGYRARIA 107 (336)
Q Consensus 32 ~v~~al~~~~~~~~~Ypd~-~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~~vii~~P~y~~y~~~~~ 107 (336)
.+.+++.+.+.. ..|-.. .-.++.+.+|+++|.. ..+.++.++.||.+++.++ +||+|+++.-+|......+.
T Consensus 45 ~~~~~~~~vl~s-g~~~~G~~v~~fE~~~a~~~g~k--~ai~v~SGT~AL~lal~al~i~~gdeVi~p~~t~~at~~ai~ 121 (399)
T 2oga_A 45 ETDAAIARVLDS-GRYLLGPELEGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAVS 121 (399)
T ss_dssp HHHHHHHHHHHH-TCCSSSHHHHHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHCCC--EEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH
T ss_conf 999999999857-99778976999999999997869--699967889999999998699993999979957375688999
Q ss_pred HHCCCEEEECCCC-CCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCHH
Q ss_conf 8188036415543-567788999730--002431330366332222237999999973787202-521002588662003
Q T0636 108 VSGLRHFEIGLTD-DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLI-DETYVDYSSFRARGL 183 (336)
Q Consensus 108 ~~g~~~~~vp~~~-~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~Iv-DeaY~~f~~~~~~~l 183 (336)
..|..++.+..++ .+.+|++.+++. .++++|++. +.-|...+.++|.++++++++.|| |.|-.-.+...-...
T Consensus 122 ~~g~~pvf~Di~~~t~~id~~~l~~~i~~~tkaIi~v---hl~G~~~d~~~i~~i~~~~~i~vIEDaAqa~Ga~~~gk~~ 198 (399)
T 2oga_A 122 ATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALLPV---HLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRI 198 (399)
T ss_dssp HTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEET
T ss_pred HHCCCEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEE---CCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHCCCCEEC
T ss_conf 7157718721432212588899998727665189850---7779834538999989874977999686655510364414
Q ss_pred HHCCCHHHHHHH--HHHHCCCCCCCEEECC-CHHHHHHHHHCCCC----------CC----CCHHHHHHHHHHHHHHHHH
Q ss_conf 324520012023--4652334345313117-88999999733787----------78----7777899999997459999
Q T0636 184 AYGENELVFRSF--SKSYGLAGLRLGALFG-PSELIAAMKRKQWF----------CN----VGTLDLHALEAALDNDRAR 246 (336)
Q Consensus 184 ~~~~n~iv~~S~--SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~~----------~~----~~~~~~~aa~~~l~~~~~~ 246 (336)
..+.+ +-+.|| +|.++..|- =|.++. ++++.+.++..+.. ++ ++.+....+...|+.-
T Consensus 199 G~~gd-~~~fSF~~~K~l~~~Ge-GG~i~t~d~~l~~~~~~lr~~G~~~~~~~~~~G~N~rm~~lqAAigl~qL~~l--- 273 (399)
T 2oga_A 199 GAGSS-VAAFSFYPGKNLGCFGD-GGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHL--- 273 (399)
T ss_dssp TCTTC-EEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTH---
T ss_pred CCCCC-CEEEECCCCCCCCCCCC-CEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
T ss_conf 77443-01351368851443588-44662599999999999998099866575567751367689999999999998---
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCC-EEEC--CCC--C--EEEEECCCHHHHHHHHHHCCCEEEECCCC-----------C-
Q ss_conf 99999999999999999985897-8616--986--4--78865698899999998769389607788-----------8-
Q T0636 247 EAHIAKTLAQRRRVADALRGLGY-RVAS--SEA--N--FVLVENAAGERTLRFLRERGIQVKDAGQF-----------G- 307 (336)
Q Consensus 247 ~~~~~~~~~~r~~l~~~l~~lg~-~~~~--s~~--~--Fi~~~~~~~~~~~~~L~~~gi~vr~~~~f-----------g- 307 (336)
++..++-+...++..+.|+.... ...+ ... + ++.+...+-+.+.+.|.++||-++..... +
T Consensus 274 d~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~~l~~~L~~~GI~t~~~y~~plh~~p~~~~~~~ 353 (399)
T 2oga_A 274 DSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAP 353 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECSSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHCHHHHHCCC
T ss_conf 99999999999999984646787006766874321000000234319999999997799865517860443988773599
Q ss_pred ----CC-------CEEEEEE---CCHHHHHHHHHHHHHHHHC
Q ss_conf ----88-------7478874---7989999999999999842
Q T0636 308 ----LH-------HHIRISI---GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 308 ----~~-------~~iRis~---~~~ee~~~l~~aL~~~~e~ 335 (336)
++ +.+.+-+ -+.+|+++.++++++|.++
T Consensus 354 ~~~~~p~ae~l~~~~l~LP~~~~Lt~~di~~Ii~~I~~f~~k 395 (399)
T 2oga_A 354 PEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp CTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 879998999998497978589998999999999999999998
No 106
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.71 E-value=9.3e-14 Score=107.38 Aligned_cols=293 Identities=14% Similarity=0.172 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCCCEEECCCCCHHHHHHH
Q ss_conf 89999999998750058898-6189999999984888543886077889999999984---6992576388735699999
Q T0636 31 PRVQAAIAAAAARINRYPFD-AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSMRFVTAWPGFDGYRARI 106 (336)
Q Consensus 31 ~~v~~al~~~~~~~~~Ypd~-~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~~vii~~P~y~~y~~~~ 106 (336)
+.-++++.+.+.. ..|... .-.++.+.+|+++|. +..+.++.++.|+.+++.++ +||+|+++.-+|..-...+
T Consensus 20 ~~e~~~v~~~l~s-g~~~~G~~v~~fE~~~a~~~g~--~~av~~~Sgt~Al~~al~al~~~~gdeVi~p~~t~~~~~~ai 96 (393)
T 1mdo_A 20 AEELAAVKTVLDS-GWITTGPKNQELEAAFCRLTGN--QYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMI 96 (393)
T ss_dssp HHHHHHHHHHHHH-TCCSSSHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHCCCCCCCEEECCCCEEHHHHHHH
T ss_conf 9999999999975-9876898899999999999782--959996788999999999819999898957996403310365
Q ss_pred HHHCCCEEEECCCC-CCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCH
Q ss_conf 98188036415543-567788999730--002431330366332222237999999973787202-52100258866200
Q T0636 107 AVSGLRHFEIGLTD-DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLI-DETYVDYSSFRARG 182 (336)
Q Consensus 107 ~~~g~~~~~vp~~~-~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~Iv-DeaY~~f~~~~~~~ 182 (336)
...|..++.+..+. .+.+|++++++. .++++|+++ +..|...+.++|.++++++++.|| |.|-.-.+......
T Consensus 97 ~~~g~~pv~~Di~~~~~~~d~~~l~~~i~~~tkaIi~~---h~~G~~~d~~~i~~i~~~~~i~lIeD~a~a~g~~~~~~~ 173 (393)
T 1mdo_A 97 VLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRH 173 (393)
T ss_dssp HHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEE
T ss_pred HHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEE---CCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
T ss_conf 33598889941433234688999997517785089702---785872148899999997497699758320267008921
Q ss_pred HHHCCCHHHHHHH--HHHHCCCCCCCEEECC-CHHHHHHHHHCCCC--------------------------CCCCHHHH
Q ss_conf 3324520012023--4652334345313117-88999999733787--------------------------78777789
Q T0636 183 LAYGENELVFRSF--SKSYGLAGLRLGALFG-PSELIAAMKRKQWF--------------------------CNVGTLDL 233 (336)
Q Consensus 183 l~~~~n~iv~~S~--SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~~--------------------------~~~~~~~~ 233 (336)
....+. -+.|| +|.++ +| .=|.++. ++++.+.++..+.. +.++.+..
T Consensus 174 ~g~~g~--~~fSf~~~K~l~-~g-eGG~i~t~~~~l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~G~N~rmsel~A 249 (393)
T 1mdo_A 174 IGARGT--AIFSFHAIKNIT-CA-EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNA 249 (393)
T ss_dssp TTSSSE--EEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHH
T ss_pred CCCCCE--EEEECCCCCCCC-CC-CCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 478871--898698866787-88-96189951299999999877559775435332333332112356875646325788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC-CC-C---CE--EEEECC------CHHHHHHHHHHCCCEE
Q ss_conf 9999997459999999999999999999999858978616-98-6---47--886569------8899999998769389
Q T0636 234 HALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVAS-SE-A---NF--VLVENA------AGERTLRFLRERGIQV 300 (336)
Q Consensus 234 ~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~-s~-~---~F--i~~~~~------~~~~~~~~L~~~gi~v 300 (336)
..+...|+. +++.+++.+....++.+.|+++.....+ .. . +| +.+... +-+.+.+.|.++||.+
T Consensus 250 aig~~qL~~---l~~~i~~R~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~gI~~ 326 (393)
T 1mdo_A 250 AIALAQLQK---LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGT 326 (393)
T ss_dssp HHHHHHHHT---HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCC
T ss_pred HHHHCCCCC---HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHCCCCE
T ss_conf 775200100---48999999999999999860589865666321243210454220432224135999999999879982
Q ss_pred EECCCC--------------CC-------CCEEEEEEC---CHHHHHHHHHHHHHHHHCC
Q ss_conf 607788--------------88-------874788747---9899999999999998429
Q T0636 301 KDAGQF--------------GL-------HHHIRISIG---REEDNDRLLAALAEYSDHS 336 (336)
Q Consensus 301 r~~~~f--------------g~-------~~~iRis~~---~~ee~~~l~~aL~~~~e~~ 336 (336)
++...+ .+ .+.+.+-+. |.+|+++.+++|+++.++.
T Consensus 327 ~~~y~pl~~~~~~~~~~~~~~~p~ae~~~~~~l~LP~~~~lt~~di~~Ii~~i~~i~~~~ 386 (393)
T 1mdo_A 327 GLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp BCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred EEECCCHHCCHHHHHHCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 215851231899896387789989999984979864899999999999999999999665
No 107
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genomics, SGC stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.71 E-value=5e-15 Score=115.63 Aligned_cols=208 Identities=15% Similarity=0.141 Sum_probs=133.4
Q ss_pred CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-CCCCEEECCCCCHHHHHHH----HHHCCCEEEECCCCCC
Q ss_conf 8986189999999984888543886077889999999984-6992576388735699999----9818803641554356
Q T0636 48 PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRARI----AVSGLRHFEIGLTDDL 122 (336)
Q Consensus 48 pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-~~~~vii~~P~y~~y~~~~----~~~g~~~~~vp~~~~~ 122 (336)
..|.-..|.+++|+..|-. +.+++.+| ..++..++..+ +||+|+++...|....... ...|+++..++.
T Consensus 65 ~nPt~~~LE~~lA~leg~e-~al~~sSG-mAA~~ail~ll~~GD~VI~~~~~y~~t~~~~~~~~~~~gv~v~~~d~---- 138 (403)
T 3cog_A 65 GNPTRNCLEKAVAALDGAK-YCLAFASG-LAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC---- 138 (403)
T ss_dssp -CHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT----
T ss_pred CCHHHHHHHHHHHHHHCCC-EEEEECCH-HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECC----
T ss_conf 8866999999999984998-39996649-99999999985799989992786358999999998606859998599----
Q ss_pred CCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC-CC-CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHH
Q ss_conf 7788999730--00243133036633222223799999997378-72-02521002588662003324520012023465
Q T0636 123 LLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAG-KL-LIDETYVDYSSFRARGLAYGENELVFRSFSKS 198 (336)
Q Consensus 123 ~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~-~~-IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~ 198 (336)
.|++.+++. .++|+|++-+|.||||.+.+.+.|.+++++++ ++ |+|..+.. +....++...-+ +|+.|+||.
T Consensus 139 -~D~~~le~ai~~~tklV~vEspsNp~g~v~Di~~I~~ia~~~G~i~lvvDnt~a~--~~~~~pl~~GAD-ivv~S~tKy 214 (403)
T 3cog_A 139 -SKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMS--PYFQRPLALGAD-ISMYSATKY 214 (403)
T ss_dssp -TSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTC--TTTCCTTTTTCS-EEEEETTTT
T ss_pred -CCHHHHHHHCCCCCCEEEEECCCCCCCEECCHHHHHHHHHHCCCCEEEEECCCCC--CCCCCCCCCCEE-EEEEECCCC
T ss_conf -9899999746568868999788898886376799999998718971762045336--400235445646-998503134
Q ss_pred HCCCC-CCCEEECC-CHHHHHHHHHCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 23343-45313117-8899999973378778--77778999999974599999999999999999999998589
Q T0636 199 YGLAG-LRLGALFG-PSELIAAMKRKQWFCN--VGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLG 268 (336)
Q Consensus 199 ~gl~G-lRiG~~i~-~~~~i~~l~~~~~~~~--~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg 268 (336)
+|-.| .-.|.++. ++++.++++..+..++ ++.........-++ -+..+.++..++..++.+.|+...
T Consensus 215 l~Gh~d~~gG~vv~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~---Tl~~R~~~~~~nA~~lA~~L~~~p 285 (403)
T 3cog_A 215 MNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLK---TLHVRMEKHFKNGMAVAQFLESNP 285 (403)
T ss_dssp TTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 45788720053147859999999988743577489999999975698---578899999999999999999689
No 108
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.70 E-value=4.5e-14 Score=109.46 Aligned_cols=288 Identities=14% Similarity=0.129 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCCCEEECCCCCHHHHHHHHH
Q ss_conf 999999987500588986--189999999984888543886077889999999984---699257638873569999998
Q T0636 34 QAAIAAAAARINRYPFDA--EPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSMRFVTAWPGFDGYRARIAV 108 (336)
Q Consensus 34 ~~al~~~~~~~~~Ypd~~--~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~~vii~~P~y~~y~~~~~~ 108 (336)
++++.+.+.. +.+...| -.++.+.+|+++|+ +..+.++.++.|+.+++.++ +||+|+++..+|......+..
T Consensus 39 ~~~~~~~~~~-~~~~~~G~~~~~fE~~~a~~~g~--~~av~~~SGT~Al~lal~~l~~~~gdeVI~~~~~~~~~~~~~~~ 115 (391)
T 3dr4_A 39 RDYVLECMDT-TWISSVGRFIVEFEKAFADYCGV--KHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTY 115 (391)
T ss_dssp HHHHHHHHHH-TCCSSCSHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHHHH
T ss_pred HHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHH
T ss_conf 9999999975-97178997999999999998696--95999668999999999982889979899831433222210111
Q ss_pred HCCCEEEECCCC-CCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCHHH
Q ss_conf 188036415543-567788999730--002431330366332222237999999973787202-5210025886620033
Q T0636 109 SGLRHFEIGLTD-DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLI-DETYVDYSSFRARGLA 184 (336)
Q Consensus 109 ~g~~~~~vp~~~-~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~Iv-DeaY~~f~~~~~~~l~ 184 (336)
.|..++.++.++ ++.+|++++++. .+|++|+++ |+.|...+.++|.++|+++++.|+ |+|..-.+........
T Consensus 116 ~g~~~v~~Di~~~~~~id~~~le~~i~~ktkaIi~v---h~~G~~~d~~~i~~iakk~~i~lIeD~A~a~G~~~~~~~~g 192 (391)
T 3dr4_A 116 CGATPVLVDNDPRTFNLDAAKLEALITPRTKAIMPV---HLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSG 192 (391)
T ss_dssp TTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEECCB---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEE---CCCCCHHCHHHHHHHHHHCCCEEEEECHHHHCCCCCCEECC
T ss_conf 003896135775346889999998458998199997---98777107999999999849999997711207763881134
Q ss_pred HCCCHHHHHHHH--HHHCCCCCCCEEECC-CHHHHHHHHHCCCC--------------CC--CCHHHHHHHHHHHHHHHH
Q ss_conf 245200120234--652334345313117-88999999733787--------------78--777789999999745999
Q T0636 185 YGENELVFRSFS--KSYGLAGLRLGALFG-PSELIAAMKRKQWF--------------CN--VGTLDLHALEAALDNDRA 245 (336)
Q Consensus 185 ~~~n~iv~~S~S--K~~gl~GlRiG~~i~-~~~~i~~l~~~~~~--------------~~--~~~~~~~aa~~~l~~~~~ 245 (336)
...+ +.+.||. |... .|- -|.++. +.++.+.++..+.. ++ .+.+....+...++.
T Consensus 193 ~~gd-~~~~Sf~~~k~~~-~g~-GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~n~r~s~i~Aaigl~ql~~--- 266 (391)
T 3dr4_A 193 SLGD-CATFSFFGNAIIT-TGE-GGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLER--- 266 (391)
T ss_dssp SSSS-EEEEECBTTSSSC-CBS-CEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHT---
T ss_pred CCCC-CEEECCCCCCEEE-CCC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---
T ss_conf 5787-0585367752132-267-663023302222110122246663212332123787766777999998998875---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCC-CEEECC---C--CC---E-EEEEC---CCHHHHHHHHHHCCCEEEECCCC------
Q ss_conf 99999999999999999998589-786169---8--64---7-88656---98899999998769389607788------
Q T0636 246 REAHIAKTLAQRRRVADALRGLG-YRVASS---E--AN---F-VLVEN---AAGERTLRFLRERGIQVKDAGQF------ 306 (336)
Q Consensus 246 ~~~~~~~~~~~r~~l~~~l~~lg-~~~~~s---~--~~---F-i~~~~---~~~~~~~~~L~~~gi~vr~~~~f------ 306 (336)
+++.+++-+...+++.+.|+++. +...+. . .+ | +.++. .+-+.+.+.|.++||.+|+...+
T Consensus 267 l~~~~~~R~~i~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~rd~l~~~L~~~GI~~r~~~~plh~~~~ 346 (391)
T 3dr4_A 267 VDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPP 346 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGG
T ss_pred HCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCHH
T ss_conf 14421123121123322233333334576422222220011000233323455999999999879976773856454977
Q ss_pred ----C---CC-------CEEEEEEC---CHHHHHHHHHHHHHHH
Q ss_conf ----8---88-------74788747---9899999999999998
Q T0636 307 ----G---LH-------HHIRISIG---REEDNDRLLAALAEYS 333 (336)
Q Consensus 307 ----g---~~-------~~iRis~~---~~ee~~~l~~aL~~~~ 333 (336)
. ++ +.+.+-+. |.+|+++.+++|++++
T Consensus 347 ~~~~~~~~~p~ae~i~~~~i~LP~~~~lt~~di~~Ii~~ik~iL 390 (391)
T 3dr4_A 347 YAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp GGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred HHHCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 77468899979999982989915889999999999999999985
No 109
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.70 E-value=1.8e-13 Score=105.53 Aligned_cols=312 Identities=15% Similarity=0.125 Sum_probs=189.6
Q ss_pred HCCCCCCEECC--CCCCCCCCCHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHH
Q ss_conf 03665535735--765488876899999999987500588986--18999999998488854388607788999999998
Q T0636 11 VRAAAQAVCLA--FNENPEAVEPRVQAAIAAAAARINRYPFDA--EPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAE 86 (336)
Q Consensus 11 ~~~~~~~i~L~--~Nenp~~p~~~v~~al~~~~~~~~~Ypd~~--~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~ 86 (336)
..|++.+++-- .....++....+.+++.+.++. +.|...| -.++.+++|+|+|.. ..+.++.++.|+.+++.+
T Consensus 10 ~~gg~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~s-~~~s~~G~~v~~fE~~~a~~~g~k--~av~~~SGT~AL~lal~a 86 (424)
T 2po3_A 10 FFGGPAAFDQPLLVGRPNRIDRARLYERLDRALDS-QWLSNGGPLVREFEERVAGLAGVR--HAVATCNATAGLQLLAHA 86 (424)
T ss_dssp GGTCCCSCSSCEETTCCCCCCHHHHHHHHHHHHHH-TCCSSSCHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHCCC--EEEEECCHHHHHHHHHHH
T ss_conf 43898576787676799999789999999999966-986789978999999999997849--299967779999999997
Q ss_pred H-CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC-CCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 4-69925763887356999999818803641554-3567788999730--002431330366332222237999999973
Q T0636 87 F-SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT-DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQR 162 (336)
Q Consensus 87 ~-~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~-~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~ 162 (336)
+ .+|+|+++.-+|......+...|..++.++.+ +.|.+|++.+++. .++++|++. +.-|...+.++|.+++++
T Consensus 87 l~~~deVivps~t~~at~~ai~~~G~~pvfvDid~~t~~~d~~~i~~~it~~tkaIi~v---h~~G~~~d~~~i~~i~k~ 163 (424)
T 2po3_A 87 AGLTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGV---HLWGRPCAADQLRKVADE 163 (424)
T ss_dssp HTCCSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEE---CGGGCCCCHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEE---CCCCCCCCHHHHHHHHHH
T ss_conf 79979899889741823999997799899997523423588999987523575399984---577876530455546775
Q ss_pred CCCCCC-CCCCCCCCCCCCCHHHHCCCHHHHHHH--HHHHCCCCCCCEEECC-CHHHHHHHHHCCCC-------------
Q ss_conf 787202-521002588662003324520012023--4652334345313117-88999999733787-------------
Q T0636 163 AGKLLI-DETYVDYSSFRARGLAYGENELVFRSF--SKSYGLAGLRLGALFG-PSELIAAMKRKQWF------------- 225 (336)
Q Consensus 163 ~~~~Iv-DeaY~~f~~~~~~~l~~~~n~iv~~S~--SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~~------------- 225 (336)
+++.|| |.|..-.+...-..+..+.+ +.+.|| +|.++. | -=|.++. ++++.+.++..+..
T Consensus 164 ~~i~lIEDaA~a~Ga~~~gk~~Gs~Gd-~~~fSF~~~K~itt-G-eGG~i~t~d~~l~~~~r~~r~~G~~~~~~~~~~g~ 240 (424)
T 2po3_A 164 HGLRLYFDAAHALGCAVDGRPAGSLGD-AEVFSFHATKAVNA-F-EGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGT 240 (424)
T ss_dssp TTCEEEEECTTCTTCEETTEETTSSSS-EEEEECCTTSSSCC-S-SCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCC
T ss_pred CCCEEEEECHHHHCCCCCCEEECCCCC-EEEECCHHHCCCCC-C-CCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 297699603143166329988434644-22155411033651-7-98924057999999999987268675655445674
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECC----CCC--EEEEECC------CHHHHHH
Q ss_conf -7877778999999974599999999999999999999998589-786169----864--7886569------8899999
Q T0636 226 -CNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLG-YRVASS----EAN--FVLVENA------AGERTLR 291 (336)
Q Consensus 226 -~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg-~~~~~s----~~~--Fi~~~~~------~~~~~~~ 291 (336)
+.++.+....+...|+. +++.+++-++..+++.+.|+++. +.+.+. ..+ |+.+... +-+.+.+
T Consensus 241 n~rmsel~Aaigl~qL~~---l~~~~~~R~~~a~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~Rd~l~~ 317 (424)
T 2po3_A 241 NAKMSEAAAAMGLTSLDA---FPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVME 317 (424)
T ss_dssp BCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
T ss_conf 220069999999998736---48999999999999999873389843667765676423689999612125246999999
Q ss_pred HHHHCCCEEEECCCCC--------------CC-------CEEEEEE---CCHHHHHHHHHHHHHHHH
Q ss_conf 9987693896077888--------------88-------7478874---798999999999999984
Q T0636 292 FLRERGIQVKDAGQFG--------------LH-------HHIRISI---GREEDNDRLLAALAEYSD 334 (336)
Q Consensus 292 ~L~~~gi~vr~~~~fg--------------~~-------~~iRis~---~~~ee~~~l~~aL~~~~e 334 (336)
.|.++||-++....+. ++ +.+.+-+ -+.+|+++.+++||+...
T Consensus 318 ~L~~~GI~~~~~y~p~l~~~~~y~~~~~~~~P~ae~l~~~~l~LP~~~~Lt~~di~~Ii~~IK~~~~ 384 (424)
T 2po3_A 318 VLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCAT 384 (424)
T ss_dssp HHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9998799885026973000977618998999899999859798978999899999999999999986
No 110
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.69 E-value=1.8e-14 Score=112.04 Aligned_cols=285 Identities=16% Similarity=0.180 Sum_probs=164.7
Q ss_pred HCCC-CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHC--CC-------CEEECCCCCHHHHHHHHHHCCCEE
Q ss_conf 0588-9861899999999848885438860778899999999846--99-------257638873569999998188036
Q T0636 45 NRYP-FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEFS--SM-------RFVTAWPGFDGYRARIAVSGLRHF 114 (336)
Q Consensus 45 ~~Yp-d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~~--~~-------~vii~~P~y~~y~~~~~~~g~~~~ 114 (336)
..|. +++..+|++++++++|. +.++++++++++...++.++. ++ .++...+.|..+.......|...+
T Consensus 70 ~~y~~~~~~~~l~~~~a~~~g~--e~~~~~~sG~~A~~~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~~~~ 147 (467)
T 1ax4_A 70 EAYAGSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAI 147 (467)
T ss_dssp CCSSSCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCC--CEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHCCCCEE
T ss_conf 4226782399999999999799--96998998599999999999975676089987489547765421799986698032
Q ss_pred EECCC----------CCCCCCHHHHHHHCCH------HHHHHHCCCCCCC-CCCCHHHH---HHHHHHCCC-CCCCCCCC
Q ss_conf 41554----------3567788999730002------4313303663322-22237999---999973787-20252100
Q T0636 115 EIGLT----------DDLLLDPNDLAQVSRD------DCVVLANPSNPTG-QALSAGEL---DQLRQRAGK-LLIDETYV 173 (336)
Q Consensus 115 ~vp~~----------~~~~~d~~~l~~~~~~------~~i~l~nPnNPTG-~~~~~~~l---~~l~~~~~~-~IvDeaY~ 173 (336)
.++.. .++.+|++++++..+. .++++.+++|..| .+++.+.+ .++|++++. +++||+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~~~~~~~D~~~~ 227 (467)
T 1ax4_A 148 NIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARF 227 (467)
T ss_dssp ECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTH
T ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 14345556776678877771999999998644876177887305536662353899999999999998399999965425
Q ss_pred C----CC--------CCCCCHHH----HCCCHHHHHHHHHHHCCCCCCCEEECCC--HHHHHHHHHC----CCC---CCC
Q ss_conf 2----58--------86620033----2452001202346523343453131178--8999999733----787---787
Q T0636 174 D----YS--------SFRARGLA----YGENELVFRSFSKSYGLAGLRLGALFGP--SELIAAMKRK----QWF---CNV 228 (336)
Q Consensus 174 ~----f~--------~~~~~~l~----~~~n~iv~~S~SK~~gl~GlRiG~~i~~--~~~i~~l~~~----~~~---~~~ 228 (336)
. +. ........ ...+ ++..|++|..+.+ +.|+++.+ .++.+..+.. ... .+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~t~s~~K~~~~~--~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (467)
T 1ax4_A 228 CENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLN--IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGL 304 (467)
T ss_dssp HHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCS--SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTC
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC-EEEEECCCCCCCC--CCEEEECCCHHHHHHHHHCCCCCEECCCCCCCH
T ss_conf 5424212456710047743023333225577-5899544677778--750786076188998753246622157766317
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC-CCEEEEECC------------CHHHHHHHHHH
Q ss_conf 77789999999745999999999999999999999985897861698-647886569------------88999999987
Q T0636 229 GTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSE-ANFVLVENA------------AGERTLRFLRE 295 (336)
Q Consensus 229 ~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~-~~Fi~~~~~------------~~~~~~~~L~~ 295 (336)
...+..++...+. ....++..++.....+++.+.|+++|..+.++. +.+++++.. ........|.+
T Consensus 305 ~~~a~~a~~~~l~-e~~~~~~~~~r~~~~~~L~~~L~~~g~~~~~~~g~~~~~~d~~~~~~~~~~~~~~~~~~~~~Ll~~ 383 (467)
T 1ax4_A 305 AGRDMAAMVQGLE-EGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLE 383 (467)
T ss_dssp CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 8999999999869-987699999999999999999986699714467763146423342578765454247899999986
Q ss_pred CCCEEEECCC-------------CCCCCEEEEEEC----CHHHHHHHHHHHHHHHHC
Q ss_conf 6938960778-------------888874788747----989999999999999842
Q T0636 296 RGIQVKDAGQ-------------FGLHHHIRISIG----REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 296 ~gi~vr~~~~-------------fg~~~~iRis~~----~~ee~~~l~~aL~~~~e~ 335 (336)
.||.....+. +...+.+|+++. |.|++++++++|+++.++
T Consensus 384 ~GV~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~e~iD~v~eal~~i~e~ 440 (467)
T 1ax4_A 384 SGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK 440 (467)
T ss_dssp HCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 290785064003456777887566766715885588999999999999999999999
No 111
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.69 E-value=8.9e-15 Score=114.00 Aligned_cols=310 Identities=12% Similarity=0.144 Sum_probs=175.9
Q ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHCC-CC--CCHHHHHHHHHHHHCCCHHH-EEEECCHHHHHHHHHHHH--CCCCE
Q ss_conf 73576548887689999999998750058-89--86189999999984888543-886077889999999984--69925
Q T0636 19 CLAFNENPEAVEPRVQAAIAAAAARINRY-PF--DAEPRVMRKLAEHFSCPEDN-LMLVRGIDECFDRISAEF--SSMRF 92 (336)
Q Consensus 19 ~L~~Nenp~~p~~~v~~al~~~~~~~~~Y-pd--~~~~~Lr~aia~~~~v~~d~-I~~t~Gs~~~i~~~~~~~--~~~~v 92 (336)
++-++.-|-+.++.|++||... .++.+ ++ .-..+.|+.+++.++++.+. |+++.|++.++..++..+ .++++
T Consensus 19 ~~l~~PGP~~v~~~V~~Am~~~--~~~Hrs~ef~~~~~~~r~~L~~ll~~~~~~~v~~~gsgT~a~ea~~~~~~~~~~~~ 96 (396)
T 2ch1_A 19 KIMMGPGPSNCSKRVLTAMTNT--VLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRV 96 (396)
T ss_dssp CBCCSSSSCCCCHHHHHHTTSC--CCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCCCCCCCCCHHHHHHHCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEE
T ss_conf 7110089978999999975767--78878999999999999999999689997199976848999999999745578701
Q ss_pred EECCCCCHH--HHHHHHHHCCCEEEECCCCCCCCCHHHHHHH---CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-C
Q ss_conf 763887356--9999998188036415543567788999730---002431330366332222237999999973787-2
Q T0636 93 VTAWPGFDG--YRARIAVSGLRHFEIGLTDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-L 166 (336)
Q Consensus 93 ii~~P~y~~--y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~---~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~ 166 (336)
++..-+... ....+..++..+..+....+...+.+.+... .+++.+.+++-+|.||...+.+++..+++.++. +
T Consensus 97 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tg~~~~~~~i~~~~~~~~~~~ 176 (396)
T 2ch1_A 97 LIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLL 176 (396)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEE
T ss_pred EEECCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEE
T ss_conf 11013201100124555532033334565456631000001013687510465411125332320233421120367449
Q ss_pred CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHC-CCCCCCEEECCCHHHHHHHHHCCCCC-------------------
Q ss_conf 0252100258866200332452001202346523-34345313117889999997337877-------------------
Q T0636 167 LIDETYVDYSSFRARGLAYGENELVFRSFSKSYG-LAGLRLGALFGPSELIAAMKRKQWFC------------------- 226 (336)
Q Consensus 167 IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~g-l~GlRiG~~i~~~~~i~~l~~~~~~~------------------- 226 (336)
++|.+.. ++......-...-..+ +-|--|.++ .+| +|+++.+++.++.+......+
T Consensus 177 ~vDavss-~g~~~id~~~~~iD~~-~~s~~K~l~gp~G--~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (396)
T 2ch1_A 177 IVDAVAS-LCGVPFYMDKWEIDAV-YTGAQKVLGAPPG--ITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDE 252 (396)
T ss_dssp EEECTTT-BTTBCCCTTTTTCCEE-ECCCC-CCCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSS
T ss_pred EEECHHH-HCCCCCCHHCCCCEEE-EECCCCCCCCCCE--EEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 9984243-1156500112466489-9448765369987--9874456789987653024543112535767664201110
Q ss_pred ------CCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC----C-CEEEEECC---CHHHHH
Q ss_conf ------8777789999999745--999999999999999999999985897861698----6-47886569---889999
Q T0636 227 ------NVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGLGYRVASSE----A-NFVLVENA---AGERTL 290 (336)
Q Consensus 227 ------~~~~~~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~----~-~Fi~~~~~---~~~~~~ 290 (336)
+.......+...++.. ........++.......+...+...+....... . ..+.+.+| ++.++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~v~s~~~p~~~~~~~l~ 332 (396)
T 2ch1_A 253 PKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVDWWKVS 332 (396)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCCHHHHH
T ss_conf 01234532467888888788899876434689999998888887654201233357746519848999899999999999
Q ss_pred HHHHH-CCCEEEECCCCCCCCEEEEE-EC---CHHHHHHHHHHHHHHHH
Q ss_conf 99987-69389607788888747887-47---98999999999999984
Q T0636 291 RFLRE-RGIQVKDAGQFGLHHHIRIS-IG---REEDNDRLLAALAEYSD 334 (336)
Q Consensus 291 ~~L~~-~gi~vr~~~~fg~~~~iRis-~~---~~ee~~~l~~aL~~~~e 334 (336)
..|.+ +||.|+.|...--.+.+||| +| ++|++++++++|++.++
T Consensus 333 ~~L~~~~gI~i~~G~~~~~~~~~RIs~~g~~~~~edId~l~~al~e~L~ 381 (396)
T 2ch1_A 333 QYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLK 381 (396)
T ss_dssp HHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9996159989968876656988997077077999999999999999999
No 112
>3jzl_A Putative cystathionine beta-lyase involved in aluminum resistance; YP_013912.1, structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.69 E-value=1.6e-14 Score=112.37 Aligned_cols=258 Identities=12% Similarity=0.160 Sum_probs=158.4
Q ss_pred HHHHHHHHH-HHH--HH---CC--CCCCHHHHHHHHHHHHCCCHHHEE---EECCHHHHHHHHHHHH--CCCCEEECC-C
Q ss_conf 999999999-875--00---58--898618999999998488854388---6077889999999984--699257638-8
Q T0636 32 RVQAAIAAA-AAR--IN---RY--PFDAEPRVMRKLAEHFSCPEDNLM---LVRGIDECFDRISAEF--SSMRFVTAW-P 97 (336)
Q Consensus 32 ~v~~al~~~-~~~--~~---~Y--pd~~~~~Lr~aia~~~~v~~d~I~---~t~Gs~~~i~~~~~~~--~~~~vii~~-P 97 (336)
.|++|++++ +.+ ++ .| -|++...|.+.+|+.+|-. +.++ +++| +.++..++.++ +||++++.. +
T Consensus 33 kvl~Af~~~~v~~~~f~~stGYgy~D~gr~~LE~~~A~LfGaE-aALvrp~fsSG-T~Ai~~AL~all~PGDeVI~~~g~ 110 (409)
T 3jzl_A 33 KVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKTE-AALVRPQIISG-THAISTVLFGILRPDDELLYITGQ 110 (409)
T ss_dssp HHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTCS-EEEEETTSCSH-HHHHHHHHHHHCCTTCEEEECSSS
T ss_pred HHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC-EEEEECCCCCH-HHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 9999998708453215887777878776999999999883982-06863687669-999999999856899989984699
Q ss_pred CCHHHHHH----------HHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHH-CCCCCCCCCCCHHHHH---HHHH
Q ss_conf 73569999----------998188036415543567788999730--002431330-3663322222379999---9997
Q T0636 98 GFDGYRAR----------IAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLA-NPSNPTGQALSAGELD---QLRQ 161 (336)
Q Consensus 98 ~y~~y~~~----------~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~-nPnNPTG~~~~~~~l~---~l~~ 161 (336)
.|...... +..+|+.+..+++.++..+|++++++. +++|++++- ++++|++.+++.++|. ++++
T Consensus 111 ~Y~tl~~vig~~~~~~~sL~~~GV~~~~v~l~~~g~id~e~ie~aI~p~TKlV~Ie~S~~y~~~p~l~i~dI~~I~~lak 190 (409)
T 3jzl_A 111 PYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVK 190 (409)
T ss_dssp CCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 63779998655412243588739563524887656458999997446767379999447888999775999999999987
Q ss_pred HC--C-CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCC-EEECCCHHHHHHHHHCC-CCCCCCH---HHH
Q ss_conf 37--8-720252100258866200332452001202346523343453-13117889999997337-8778777---789
Q T0636 162 RA--G-KLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRL-GALFGPSELIAAMKRKQ-WFCNVGT---LDL 233 (336)
Q Consensus 162 ~~--~-~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRi-G~~i~~~~~i~~l~~~~-~~~~~~~---~~~ 233 (336)
.+ + ++++|+.|.+|..... ++...-+ +++.|+||.+|-.+..+ ||+++++++|++...+. .| ++.. .+.
T Consensus 191 ~~~~~viv~vDn~yg~~v~~~~-P~~~GAD-lV~~SltK~LGG~~ap~GG~IaGkkelIe~a~~rltap-g~g~~~ga~~ 267 (409)
T 3jzl_A 191 NINPEVIVFVDNCYGEFVEYQE-PPEVGAD-IIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTP-GIGREAGASL 267 (409)
T ss_dssp HHCTTCEEEEECTTCTTTSSCC-SGGGTCS-EEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCT-TTGGGCCCCT
T ss_pred HCCCCCEEEEECCCCCHHHCCC-HHHHCCC-EEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCC-CCCCCCCCCC
T ss_conf 6189988998588754342068-6785878-89999851268987765789971899999999887289-6433347585
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC----CCE-EEEECCCHHHHHHHHH
Q ss_conf 999999745999999999999999999999985897861698----647-8865698899999998
Q T0636 234 HALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSE----ANF-VLVENAAGERTLRFLR 294 (336)
Q Consensus 234 ~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~----~~F-i~~~~~~~~~~~~~L~ 294 (336)
......++.-......+.+-.+.+......|+++|+++.|.- +-. --+++.+.+.+..+++
T Consensus 268 ~~~~~~~qG~f~ap~~v~~a~k~~~~~a~~l~~~g~~v~P~~~~~r~d~i~~~~~~~~~~~~~f~~ 333 (409)
T 3jzl_A 268 YSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHNKEKMVAFAQ 333 (409)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCCEEECSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 524798644244079999999999999999996799658998898761799986899799999999
No 113
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate- loop, pyridoxal phosphate, selenocysteine synthase (SECS; HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.69 E-value=4.7e-14 Score=109.33 Aligned_cols=279 Identities=10% Similarity=0.002 Sum_probs=163.5
Q ss_pred HHHHHHHHCCCHH-HEEEECCHHH-HHHHHHHHH-----CCCCEEECCCCCHHHHHHHHHHCCCEEEECC---CCCCCCC
Q ss_conf 9999998488854-3886077889-999999984-----6992576388735699999981880364155---4356778
Q T0636 56 MRKLAEHFSCPED-NLMLVRGIDE-CFDRISAEF-----SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL---TDDLLLD 125 (336)
Q Consensus 56 r~aia~~~~v~~d-~I~~t~Gs~~-~i~~~~~~~-----~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~---~~~~~~d 125 (336)
...+++..|.+.. ..++++|+++ .+..++.++ ..+.|+++..........+..+|..++.|+. ++.+.+|
T Consensus 104 ~~~~~~~~g~~~~~~~~~~~~~tg~~~~~~l~a~~~~~~~~~~vi~~~~~h~s~~k~~~~~g~~~~~v~~~~~~~~~~~d 183 (450)
T 3bc8_A 104 VLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTD 183 (450)
T ss_dssp HHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECC
T ss_pred HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCC
T ss_conf 99999852997456654607337999999999999837999989987411699999999849968999755047445659
Q ss_pred HHHHHHHCC---H---HHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHH---HCCC-HHHHHH
Q ss_conf 899973000---2---431330366332222237999999973787-2025210025886620033---2452-001202
Q T0636 126 PNDLAQVSR---D---DCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLA---YGEN-ELVFRS 194 (336)
Q Consensus 126 ~~~l~~~~~---~---~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~---~~~n-~iv~~S 194 (336)
++++++..+ . -+++.++|+|++|..-+.++|.+++++++. +++|+||.-+......... .... -++..|
T Consensus 184 ~~~l~~~i~~~~~~~~~~v~~~~~~~~~g~~~~l~~i~~i~~~~~~~l~vD~A~g~~~~~~~~~~~~~~~~~~~d~~~~s 263 (450)
T 3bc8_A 184 LKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQS 263 (450)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEC
T ss_conf 99999999874556707999807988886142699999999985987999657677755403126455664761289952
Q ss_pred HHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCC
Q ss_conf 346523343453131178899999973378778777--78999999974599999999999999999999998----589
Q T0636 195 FSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGT--LDLHALEAALDNDRAREAHIAKTLAQRRRVADALR----GLG 268 (336)
Q Consensus 195 ~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~--~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~lg 268 (336)
..|.++.|+-..+.+..++++++.+......+.... ..+.++...+.. .-+...+.+.....+++.+.|+ ..+
T Consensus 264 ~hK~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lg~-~~~~~~~~~~~~~a~~l~~~L~~l~~~~~ 342 (450)
T 3bc8_A 264 LDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGC-SGYRKLLKERKEMFVYLSTQLKKLAEAHN 342 (450)
T ss_dssp HHHHHSCCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 87656679885158866989999999871676667624899999999988-63178999999999999999998887518
Q ss_pred CEEECCCCC----EEEEE------CCCHHHHHHHHHHCCCEEE----EC----------CCCCC------CCEEEEEEC-
Q ss_conf 786169864----78865------6988999999987693896----07----------78888------874788747-
Q T0636 269 YRVASSEAN----FVLVE------NAAGERTLRFLRERGIQVK----DA----------GQFGL------HHHIRISIG- 317 (336)
Q Consensus 269 ~~~~~s~~~----Fi~~~------~~~~~~~~~~L~~~gi~vr----~~----------~~fg~------~~~iRis~~- 317 (336)
..+.....+ .+.+. ..+...+...|.+.||... +. ..|+. ..++|++.+
T Consensus 343 ~~~l~~~~~~~s~~~~l~~~~~~~~~~~~~l~~~L~~~gI~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~s~ 422 (450)
T 3bc8_A 343 ERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAI 422 (450)
T ss_dssp CCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCT
T ss_pred CEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCHHHCEECCEEECCCCCCCCCCCCCEEEEECCC
T ss_conf 25357877764268998740677877999999999953975023321120161243542034555666778769998348
Q ss_pred --CHHHHHHHHHHHHHHHHC
Q ss_conf --989999999999999842
Q T0636 318 --REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 318 --~~ee~~~l~~aL~~~~e~ 335 (336)
|+||+++++++|+++.++
T Consensus 423 ~~T~edID~~v~~L~kvl~~ 442 (450)
T 3bc8_A 423 GMKMQDVDLFIKRLDKCLNI 442 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999
No 114
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A*
Probab=99.68 E-value=3.9e-13 Score=103.35 Aligned_cols=274 Identities=18% Similarity=0.240 Sum_probs=171.5
Q ss_pred HCCCCCC---HHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHH----HHHHHCCCEEE
Q ss_conf 0588986---189999999984888543886077889999999984--69925763887356999----99981880364
Q T0636 45 NRYPFDA---EPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA----RIAVSGLRHFE 115 (336)
Q Consensus 45 ~~Ypd~~---~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~----~~~~~g~~~~~ 115 (336)
..|.-.+ ...|.+++|+..|- +.-++++.+..||..++.++ +||+|+++...|..-.. .+..+|+++..
T Consensus 56 ~~YsR~gnPT~~~LE~~la~LEg~--~~a~~~sSGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~~~~~~l~~~Gi~~~~ 133 (398)
T 2rfv_A 56 YIYTRLGNPTTDALEKKLAVLERG--EAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRF 133 (398)
T ss_dssp CSBTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEE
T ss_pred CEEECCCCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 665289887899999999998698--406666678999999996256899989985312430457777652138747873
Q ss_pred ECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHH
Q ss_conf 15543567788999730--002431330366332222237999999973787-202521002588662003324520012
Q T0636 116 IGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVF 192 (336)
Q Consensus 116 vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~ 192 (336)
+... |++.+++. .++|+||+=+|.|||..+.+.+.+.++++.++. +|||..++ +|.-..++...-+ ||+
T Consensus 134 ~d~~-----d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~g~~~vvDNT~a--tP~~~~Pl~~GaD-ivi 205 (398)
T 2rfv_A 134 VDAA-----KPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFM--SPYCQQPLQLGAD-IVV 205 (398)
T ss_dssp ECTT-----SHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTT--CTTTCCGGGGTCS-EEE
T ss_pred CCCC-----CHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCC--CCEECCCHHCCCC-EEE
T ss_conf 2899-----9999997477776089942899985652565999998732297697148631--7313231322898-899
Q ss_pred HHHHHHHC-CCCCCCEEECCCHHHHHHHH--HCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 02346523-34345313117889999997--337877--87777899999997459999999999999999999999858
Q T0636 193 RSFSKSYG-LAGLRLGALFGPSELIAAMK--RKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL 267 (336)
Q Consensus 193 ~S~SK~~g-l~GlRiG~~i~~~~~i~~l~--~~~~~~--~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l 267 (336)
.|.||.+| ...+=.|.++++.+.+.+.+ ..+... .++......+..-|+. +.-++++..++...+.+.|++.
T Consensus 206 hS~TKyi~GhsD~l~G~v~~~~~~~~~~r~~~~r~~~G~~~~p~~a~l~~rgL~T---L~lRm~~~~~nA~~lA~~L~~h 282 (398)
T 2rfv_A 206 HSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT---LGIRMERHCENALKIARFLEGH 282 (398)
T ss_dssp EETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred EECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC---HHHHHHHHHHHHHHHHHHHHHC
T ss_conf 8144342688754543234789999999999999833898898999999768175---8999999999999999999749
Q ss_pred CC--EE-EC---C-------------CCCEEEEECCCH-HHHHHHHHHCCCEE-------------EECC----------
Q ss_conf 97--86-16---9-------------864788656988-99999998769389-------------6077----------
Q T0636 268 GY--RV-AS---S-------------EANFVLVENAAG-ERTLRFLRERGIQV-------------KDAG---------- 304 (336)
Q Consensus 268 g~--~~-~~---s-------------~~~Fi~~~~~~~-~~~~~~L~~~gi~v-------------r~~~---------- 304 (336)
.- +| || + .|..+-+.+..+ +...+++..-.++- .|.+
T Consensus 283 p~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~l~~~~e~~~~f~~~L~l~~~a~SlGg~eSLi~~pa~~~h~~~~~e~ 362 (398)
T 2rfv_A 283 PSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEE 362 (398)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHH
T ss_pred CCCCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCCHHH
T ss_conf 99676737886788325566521789885999996698999999997188250313637523053475312665699999
Q ss_pred --CCCC-CCEEEEEECCH--HHH-HHHHHHHHH
Q ss_conf --8888-87478874798--999-999999999
Q T0636 305 --QFGL-HHHIRISIGRE--EDN-DRLLAALAE 331 (336)
Q Consensus 305 --~fg~-~~~iRis~~~~--ee~-~~l~~aL~~ 331 (336)
..|. ++.||+|+|.+ +|. +.|.+||++
T Consensus 363 r~~~Gi~~~liRlSvGlEd~~DLi~Dl~~AL~~ 395 (398)
T 2rfv_A 363 RLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp HHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 996597929699985009999999999999997
No 115
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfuration; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.66 E-value=8.9e-14 Score=107.50 Aligned_cols=270 Identities=17% Similarity=0.162 Sum_probs=163.2
Q ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-CCCCEEECCCCCHHHHHHHH----HHCCCEEEECCCCCCC
Q ss_conf 986189999999984888543886077889999999984-69925763887356999999----8188036415543567
Q T0636 49 FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRARIA----VSGLRHFEIGLTDDLL 123 (336)
Q Consensus 49 d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-~~~~vii~~P~y~~y~~~~~----~~g~~~~~vp~~~~~~ 123 (336)
.|....|.++||+..+- +..++++.+..||..++..+ +||+|+++...|.+-...++ .+|+++..+...
T Consensus 132 nPT~~~LE~~la~LE~g--~~allfsSGMAAIsall~ll~~Gd~vv~~~~~YggT~~l~~~~l~~~Gv~~~f~d~~---- 205 (464)
T 1ibj_A 132 NPTRDALESLLAKLDKA--DRAFCFTSGMAALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT---- 205 (464)
T ss_dssp CHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT----
T ss_pred CHHHHHHHHHHHHHHCC--CCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC----
T ss_conf 87899999999998599--709995569999999999857999999968979718999999985158752015321----
Q ss_pred CCHHHHHH--HCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHC
Q ss_conf 78899973--0002431330366332222237999999973787-20252100258866200332452001202346523
Q T0636 124 LDPNDLAQ--VSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYG 200 (336)
Q Consensus 124 ~d~~~l~~--~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~g 200 (336)
|++.+++ ..++++||+-+|.|||+.+.+.+.+.+++++++. +|||..++. +.-..++..+-+ ||+.|.||.++
T Consensus 206 -d~e~~e~~i~~~tklI~~EspsNP~l~v~Di~~ia~iA~~~gi~vVVDNT~at--P~~~~Pl~~GAD-IVihS~TKYi~ 281 (464)
T 1ibj_A 206 -KLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMS--PVLSRPLELGAD-IVMHSATKFIA 281 (464)
T ss_dssp -SHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTC--TTTCCGGGTTCS-EEEEETTTTTT
T ss_pred -CHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCC--CCEECCCCCCCC-EEEEECCCCCC
T ss_conf -13566640376714999658898644446668999874226513998466445--324203445887-89831454222
Q ss_pred CCC-CCCEEECC-CHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EE-EC
Q ss_conf 343-45313117-889999997337877--8777789999999745999999999999999999999985897--86-16
Q T0636 201 LAG-LRLGALFG-PSELIAAMKRKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY--RV-AS 273 (336)
Q Consensus 201 l~G-lRiG~~i~-~~~~i~~l~~~~~~~--~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~-~~ 273 (336)
--| .=.|.++. ++.+.+.++..+..+ .++......+...++ -+..+.++..++..++.+.|+.... +| ||
T Consensus 282 GhsDv~~G~vv~~~~~~~~~l~~~~~~~G~~lsP~dA~Ll~RGL~---TL~lRm~~~~~NA~~vA~~L~~hp~V~~V~YP 358 (464)
T 1ibj_A 282 GHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIK---TMALRIEKQQENARKIAMYLSSHPRVKKVYYA 358 (464)
T ss_dssp CSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTCTTCCEEECT
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 575555864762617777888763157788489899999984157---89999999999999999998608976265566
Q ss_pred C----------------CCCEEEEECCCHHHHHHHHHHCCCE------------E-EECC------------CCCC-CCE
Q ss_conf 9----------------8647886569889999999876938------------9-6077------------8888-874
Q T0636 274 S----------------EANFVLVENAAGERTLRFLRERGIQ------------V-KDAG------------QFGL-HHH 311 (336)
Q Consensus 274 s----------------~~~Fi~~~~~~~~~~~~~L~~~gi~------------v-r~~~------------~fg~-~~~ 311 (336)
+ .|.-+-+...+.+...+++..-.++ + -|.. ..|. ++.
T Consensus 359 gL~s~p~~~~a~~~~~G~GgmlSf~~~~~e~a~~f~d~L~lf~~a~SlGg~eSLi~~pas~th~~~~~e~r~~~Gi~~~l 438 (464)
T 1ibj_A 359 GLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDL 438 (464)
T ss_dssp TSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTC
T ss_pred CCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCE
T ss_conf 53310359999856999408999996999999999970691646235787540323762113624899999975979695
Q ss_pred EEEEECCH--HH-HHHHHHHHHH
Q ss_conf 78874798--99-9999999999
Q T0636 312 IRISIGRE--ED-NDRLLAALAE 331 (336)
Q Consensus 312 iRis~~~~--ee-~~~l~~aL~~ 331 (336)
||+|+|.+ || .+.|.+||+.
T Consensus 439 iRlSVGLEd~eDLi~DL~qALk~ 461 (464)
T 1ibj_A 439 VRISAGIEDVDDLISDLDIAFKT 461 (464)
T ss_dssp EEEECCSSCHHHHHHHHHHHHHS
T ss_pred EEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99985239999999999999966
No 116
>1bjn_A PSAT, phosphoserine aminotransferase; L-serine biosynthesis; HET: LLP; 2.30A {Escherichia coli} SCOP: c.67.1.4 PDB: 1bjo_A*
Probab=99.66 E-value=1.3e-15 Score=119.49 Aligned_cols=308 Identities=11% Similarity=0.013 Sum_probs=165.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHH-------CCCCCC------HHHHHHHHHHHHCCCHH-HEEEECCHHHHHHHHHH
Q ss_conf 35765488876899999999987500-------588986------18999999998488854-38860778899999999
Q T0636 20 LAFNENPEAVEPRVQAAIAAAAARIN-------RYPFDA------EPRVMRKLAEHFSCPED-NLMLVRGIDECFDRISA 85 (336)
Q Consensus 20 L~~Nenp~~p~~~v~~al~~~~~~~~-------~Ypd~~------~~~Lr~aia~~~~v~~d-~I~~t~Gs~~~i~~~~~ 85 (336)
.||+.-|-..||.|++++.+.+.+.+ .+.+.+ ..+.|+.++++++++.+ .|++++|++++...+..
T Consensus 3 ~~F~pGP~~~p~~V~~a~~~~~~~~~~~~~s~~~~~HRs~~f~~l~~~~r~~l~~ll~~~~~~~v~~~~gs~~~~~~a~~ 82 (360)
T 1bjn_A 3 FNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVP 82 (360)
T ss_dssp EECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 77469883889999999999976212578654445767889999999999999999689999789997880899999999
Q ss_pred H-H-C-CCCEEECCCCCHHHH--HHHHHHCCCEEEECCCCCCCCCHHHHHH--HCCHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 8-4-6-992576388735699--9999818803641554356778899973--000243133036633222223799999
Q T0636 86 E-F-S-SMRFVTAWPGFDGYR--ARIAVSGLRHFEIGLTDDLLLDPNDLAQ--VSRDDCVVLANPSNPTGQALSAGELDQ 158 (336)
Q Consensus 86 ~-~-~-~~~vii~~P~y~~y~--~~~~~~g~~~~~vp~~~~~~~d~~~l~~--~~~~~~i~l~nPnNPTG~~~~~~~l~~ 158 (336)
. + . ++.+++..-++.... ..++..|..++.+....+...+.+.+++ ..+++++.++..||-||...+..++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~tg~~~~~~~i~~ 162 (360)
T 1bjn_A 83 LNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPD 162 (360)
T ss_dssp HHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCSSCSCEEECSEETTTTEECCCCCC
T ss_pred HHCCCCCCCCEEECCCCEEEEHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 85024654313530560353236667762661133203566776511447760668876999931466553541020013
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHH------------HHHHHHHCCCCC
Q ss_conf 99737872025210025886620033245200120234652334345313117889------------999997337877
Q T0636 159 LRQRAGKLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSE------------LIAAMKRKQWFC 226 (336)
Q Consensus 159 l~~~~~~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~------------~i~~l~~~~~~~ 226 (336)
.+.+..++||.+= -++... ...... -+.+.++||..++++.=.+++..... .-..........
T Consensus 163 -~~~~~~~~VDavq-s~g~~~-idv~~~--~~d~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T 1bjn_A 163 -FGADVVVAADFSS-TILSRP-IDVSRY--GVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFN 237 (360)
T ss_dssp -CCTTCCEEEECTT-TTTSSC-CCGGGC--SEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSCGGGCHHHHHHTTTCSS
T ss_pred -CCCCCEEEEEEEC-CCCCCC-CCCCCC--EEEEEECCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCHHHHHHHCCCCC
T ss_conf -5665326886502-333111-100332--48998424444678875213525545531022222210345543011367
Q ss_pred CCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE-C-----CCCCEEEEECC---CHHHHHHHHH
Q ss_conf 877778999999974---5999999999999999999999985897861-6-----98647886569---8899999998
Q T0636 227 NVGTLDLHALEAALD---NDRAREAHIAKTLAQRRRVADALRGLGYRVA-S-----SEANFVLVENA---AGERTLRFLR 294 (336)
Q Consensus 227 ~~~~~~~~aa~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~-~-----s~~~Fi~~~~~---~~~~~~~~L~ 294 (336)
.........+..... .........++.....+.+...+...+.... + |.+. +-+.++ +...+.+.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v-v~f~~~~~~~~~~~~~~l~ 316 (360)
T 1bjn_A 238 TPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMN-VPFQLADSALDKLFLEESF 316 (360)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSE-EEEEESSGGGHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHCCCEE-EEEECCCCCCHHHHHHHHH
T ss_conf 887640466778888888611189999999999999999853267431588821008359-9997899635999999999
Q ss_pred HCCCEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 76938960778888874788747---989999999999999842
Q T0636 295 ERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 295 ~~gi~vr~~~~fg~~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
++||.++.|. +.-+.+|||+. |+||+++|+++|+||.++
T Consensus 317 ~~Gi~~~~Gh--~~~g~~Ris~~~~~t~edi~~Li~~l~e~~~~ 358 (360)
T 1bjn_A 317 AAGLHALKGH--RVVGGMRASIYNAMPLEGVKALTDFMVEFERR 358 (360)
T ss_dssp HTTEECCBCC--TTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEECCC--CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7899874287--75575889845899999999999999999996
No 117
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus VF5}
Probab=99.65 E-value=2.3e-13 Score=104.79 Aligned_cols=308 Identities=15% Similarity=0.204 Sum_probs=186.2
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHC----CCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHH
Q ss_conf 66553573576--54888-768999999999875005----889861899999999848885438860778899999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINR----YPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISA 85 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~----Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~ 85 (336)
.+++.||+.++ -+.+| -.|.+.+|+.+.++++.. |+.+...+|.+.+.+.+.- .+.+..+++++|+....+.
T Consensus 26 dG~~yiD~~~g~g~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~f~~sGseA~e~Aik 104 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIK 104 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSS-CEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEECCCCCCHHHHHHH
T ss_conf 989999865288862017895999999999986537766542576999998742212653-2201223786326999999
Q ss_pred HH--------CC-CCEEECCCCCHHHHHH-HHHHCCCEEEE---CC----CCCCCCCHHHHHHHCCHH-HHHHHCC-CCC
Q ss_conf 84--------69-9257638873569999-99818803641---55----435677889997300024-3133036-633
Q T0636 86 EF--------SS-MRFVTAWPGFDGYRAR-IAVSGLRHFEI---GL----TDDLLLDPNDLAQVSRDD-CVVLANP-SNP 146 (336)
Q Consensus 86 ~~--------~~-~~vii~~P~y~~y~~~-~~~~g~~~~~v---p~----~~~~~~d~~~l~~~~~~~-~i~l~nP-nNP 146 (336)
.. .+ ..|+..+.+|-+.... ....|.....- |. .....-+.+.+.+....+ +.+|..| ..-
T Consensus 105 la~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iAavi~Epv~g~ 184 (375)
T 2eh6_A 105 LARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGE 184 (375)
T ss_dssp HHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETT
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 99999985089967899988986997455523568813345778999983322344799999964898369999644677
Q ss_pred CCCCCC-H---HHHHHHHHHCCCC-CCCCCCCCCCCCC----CCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHH
Q ss_conf 222223-7---9999999737872-0252100258866----20033245200120234652334345313117889999
Q T0636 147 TGQALS-A---GELDQLRQRAGKL-LIDETYVDYSSFR----ARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIA 217 (336)
Q Consensus 147 TG~~~~-~---~~l~~l~~~~~~~-IvDeaY~~f~~~~----~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~ 217 (336)
.|.... . +++.++|++++.+ |+||++..|+..- .......|+++ ++||.+| .|+.+|.+++.+++.+
T Consensus 185 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~gRtG~~~a~~~~gv~PDi~---~~gK~l~-~G~p~~a~~~~~~~~~ 260 (375)
T 2eh6_A 185 GGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI---ALAKGLG-GGVPIGAILAREEVAQ 260 (375)
T ss_dssp TTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSCCEEEEEEHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCEE---EECCCCC-CCCEEEEEEECHHHHH
T ss_conf 89747998999999999998198899665640876554774044429984301---1042345-6741366886288762
Q ss_pred HHHHCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECC-CHHHHHHHHH
Q ss_conf 997337--8778777789999999745999999999999999999999985897861698647886569-8899999998
Q T0636 218 AMKRKQ--WFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVENA-AGERTLRFLR 294 (336)
Q Consensus 218 ~l~~~~--~~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~~-~~~~~~~~L~ 294 (336)
.+.... .+|+-+.++..++.+.++.. ++......+..+++.+.|+++...-....|.++-+++. ++.++...+.
T Consensus 261 ~~~~~~~~~T~~g~p~a~aaa~a~l~~~---e~~~~~~~~~~~~~~~~L~~l~~~~vrg~Gl~~~ie~~~~~~~~~~~~~ 337 (375)
T 2eh6_A 261 SFTPGSHGSTFGGNPLACRAGTVVVDEV---EKLLPHVREVGNYFKEKLKELGKGKVKGRGLMLGLELERECKDYVLKAL 337 (375)
T ss_dssp TCCTTSCCCSSTTCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHTTSSEEEEETTEEEEECSSCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHH---HCHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCHHHHHHHHH
T ss_conf 4268985647288927889999999999---6613678899999999988735797400236999996560799999999
Q ss_pred HCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHH
Q ss_conf 7693896077888887478874---7989999999999999
Q T0636 295 ERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEY 332 (336)
Q Consensus 295 ~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~ 332 (336)
++|+++++.. .+.+|++. -+++|+++++++|+|.
T Consensus 338 ~~Gv~~~~~~----~~~ir~~Ppl~it~~~id~~~~~l~~~ 374 (375)
T 2eh6_A 338 EKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 7892890289----998999589688999999999999986
No 118
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.64 E-value=1.1e-12 Score=100.36 Aligned_cols=263 Identities=11% Similarity=0.119 Sum_probs=162.9
Q ss_pred CHHHHHHHHHHHHH--HHC---CCCCC--HHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCCCEEECCCCC
Q ss_conf 68999999999875--005---88986--189999999984888543886077889999999984---699257638873
Q T0636 30 EPRVQAAIAAAAAR--INR---YPFDA--EPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSMRFVTAWPGF 99 (336)
Q Consensus 30 ~~~v~~al~~~~~~--~~~---Ypd~~--~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~~vii~~P~y 99 (336)
.+..++++.+.+.. ... |...| ..++.+++|+++|.. ..|.+ +.++.|+.+++.++ +||+|+++..+|
T Consensus 15 ~~~~~~~v~~~l~sg~~~~~~~~~~~g~~~~~fE~~~a~~~g~k-~ai~~-~sgT~Al~lal~~l~~~~gdeVi~p~~t~ 92 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP-YCVPT-TSGSTALMLALEALGIGEGDEVIVPSLTW 92 (418)
T ss_dssp CHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS-EEEEE-SCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-EEEEE-CCHHHHHHHHHHHCCCCCCCEEEECCCCC
T ss_conf 99999999999970980034740588979999999999987979-59997-68899999999985989849999699766
Q ss_pred HHHHHHHHHHCCCEEEECCCCC-CCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC-CCCCCCC
Q ss_conf 5699999981880364155435-67788999730--002431330366332222237999999973787202-5210025
Q T0636 100 DGYRARIAVSGLRHFEIGLTDD-LLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLI-DETYVDY 175 (336)
Q Consensus 100 ~~y~~~~~~~g~~~~~vp~~~~-~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~Iv-DeaY~~f 175 (336)
......+...|...+.+..+++ +.+|++.+++. .++++++ |-|..|...+.++|.++++++++.|+ |.+..-.
T Consensus 93 ~a~~~~i~~~g~~pv~~Di~~~~~~~~~~~~~~~~~~~t~ai~---~v~~~G~~~d~~~I~~ia~k~~i~vIeDaa~a~g 169 (418)
T 2c81_A 93 IATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAII---PVHLFGSMANMDEINEIAQEHNLFVIEDCAQSHG 169 (418)
T ss_dssp THHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEEC---CBCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCE---EEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCC
T ss_conf 6510222123333222343322123552023321255301213---4531765215999999998639668636431357
Q ss_pred CCCCCCHHHHCCCHHHHHHH--HHHHCCCCCCCEEECC-CHHHHHHHHHCCCC--------------------------C
Q ss_conf 88662003324520012023--4652334345313117-88999999733787--------------------------7
Q T0636 176 SSFRARGLAYGENELVFRSF--SKSYGLAGLRLGALFG-PSELIAAMKRKQWF--------------------------C 226 (336)
Q Consensus 176 ~~~~~~~l~~~~n~iv~~S~--SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~~--------------------------~ 226 (336)
+...-..+.... .+.+.|| +|..+ +-.-|.++. ++++.++++..+.. +
T Consensus 170 ~~~~~~~~g~~g-d~~~fSf~~~K~i~--~geGG~i~t~d~~l~~~~~~lr~~g~~~~~~~~~~~~~~~~~~~~~~~~G~ 246 (418)
T 2c81_A 170 SVWNNQRAGTIG-DIGAFSCQQGKVLT--AGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGS 246 (418)
T ss_dssp CEETTEETTSSS-SEEEEECCTTSSSC--SSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCC
T ss_pred CCCCCEECCCCC-EEEECCCCCCEEEE--ECCCCCCCCCCCCCCCCHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 515881424464-24202455645786--667732442232310010000423544566543223234443212100022
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEC--CC---CC-E---EEEEC-----CCHHHH
Q ss_conf --87777899999997459999999999999999999999858-978616--98---64-7---88656-----988999
Q T0636 227 --NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVAS--SE---AN-F---VLVEN-----AAGERT 289 (336)
Q Consensus 227 --~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~--s~---~~-F---i~~~~-----~~~~~~ 289 (336)
-++.+....+...|+. +++.+++-++..+++.+.|+++ ++.+.+ ++ .+ | +.++. .+-+.+
T Consensus 247 n~rm~~i~Aaig~~qL~~---l~~~~~~R~~~a~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~Rd~l 323 (418)
T 2c81_A 247 NYCLSEFQSAILLDQLQE---LDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQF 323 (418)
T ss_dssp BCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHH
T ss_pred CCCCCCCCHHHHHHHHHH---HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCHHHH
T ss_conf 223321202345545543---21210111014555543321343123444333334443037899984354166799999
Q ss_pred HHHHHHC----CCEEEEC
Q ss_conf 9999876----9389607
Q T0636 290 LRFLRER----GIQVKDA 303 (336)
Q Consensus 290 ~~~L~~~----gi~vr~~ 303 (336)
.+.|+++ ++..+|.
T Consensus 324 ~~~L~~~~~~~~~~~~~~ 341 (418)
T 2c81_A 324 CEILREKLNMGTFYLHPP 341 (418)
T ss_dssp HHHHHHHHTCCTTTEECC
T ss_pred HHHHHHCCCCCEEEECCC
T ss_conf 999983779981797877
No 119
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.64 E-value=7.6e-13 Score=101.49 Aligned_cols=272 Identities=18% Similarity=0.205 Sum_probs=159.2
Q ss_pred CCCCCC---HHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHH----HCCCEEEE
Q ss_conf 588986---189999999984888543886077889999999984--699257638873569999998----18803641
Q T0636 46 RYPFDA---EPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAV----SGLRHFEI 116 (336)
Q Consensus 46 ~Ypd~~---~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~----~g~~~~~v 116 (336)
.|.-.+ ...|.+++|+..|-. ..+++.+| ..||..++.++ +||++++..+.|......... .|..+..+
T Consensus 49 ~Y~R~~nPt~~~lE~~la~leg~~-~a~~~~SG-maAi~~~~~~~~~~gd~vv~~~~~y~~t~~~~~~~~~~~~~~~~~~ 126 (412)
T 2cb1_A 49 VYARQKDPTAKALEERLKALEGAL-EAVVLASG-QAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYV 126 (412)
T ss_dssp SBTTTCCHHHHHHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHHCCC-EEEEECCH-HHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCC
T ss_conf 340898878999999999985996-28997488-9999998753034553121157752302233100444334323114
Q ss_pred CCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHH
Q ss_conf 5543567788999730--002431330366332222237999999973787-2025210025886620033245200120
Q T0636 117 GLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFR 193 (336)
Q Consensus 117 p~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~ 193 (336)
. .|++.+++. .+||+||+-+|.|||+.+.+.+.|.+++++++. +|||..+.. ++....++..+-+ ||+.
T Consensus 127 d------~d~e~~~~ai~~~tk~i~~EspsNP~l~v~Di~~i~~~a~~~g~~~vvDnT~~a-tp~~~~Pl~~GaD-iVvh 198 (412)
T 2cb1_A 127 D------PEPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGA-AGALCRPLAWGAH-VVVE 198 (412)
T ss_dssp C------SSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGT-TTTSCCGGGGTCS-EEEE
T ss_pred C------CCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECCEEC-CCCCCCCCCCCCC-EEEE
T ss_conf 8------999999987544863999987886444444188887777760555145232420-3333665346887-8996
Q ss_pred HHHHHHCCC-CCCCEEECCCH-HHH--------------------------HHHHHC--CCC-CCCCHHHHHHHHHHHHH
Q ss_conf 234652334-34531311788-999--------------------------999733--787-78777789999999745
Q T0636 194 SFSKSYGLA-GLRLGALFGPS-ELI--------------------------AAMKRK--QWF-CNVGTLDLHALEAALDN 242 (336)
Q Consensus 194 S~SK~~gl~-GlRiG~~i~~~-~~i--------------------------~~l~~~--~~~-~~~~~~~~~aa~~~l~~ 242 (336)
|.||.++-- .+=.|.++++. ++. ++++.. +.. ..++.........-++.
T Consensus 199 S~TKyi~GhsDv~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~lrgl~T 278 (412)
T 2cb1_A 199 SLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET 278 (412)
T ss_dssp ETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG
T ss_pred CCEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHH
T ss_conf 23551256776224799807178776655530123234203776676778999998765015557887889999745076
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC--EE-ECC----------------CCCEEEEECCCHHHHHHHHHHCCCEE---
Q ss_conf 999999999999999999999985897--86-169----------------86478865698899999998769389---
Q T0636 243 DRAREAHIAKTLAQRRRVADALRGLGY--RV-ASS----------------EANFVLVENAAGERTLRFLRERGIQV--- 300 (336)
Q Consensus 243 ~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~-~~s----------------~~~Fi~~~~~~~~~~~~~L~~~gi~v--- 300 (336)
+..+.++..++...+.+.|++... +| +|+ .|..+.+.+.+.+...+++..-.++-
T Consensus 279 ---L~lRm~~~~~nA~~la~~L~~hp~V~~V~yPgl~~~~~~~~~~~~~~g~Gg~~sf~l~~~e~a~~f~~~l~l~~~~S 355 (412)
T 2cb1_A 279 ---VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDLGDLERASRFLGAIRLLKAAN 355 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEECSSHHHHHHHHHHCSSEECSC
T ss_pred ---HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCEEEEEE
T ss_conf ---51232110144666776424698565421233333223221233335667346899689999999996371888766
Q ss_pred ---------EECCC------------CCC-CCEEEEEECCH--HH-HHHHHHHHH
Q ss_conf ---------60778------------888-87478874798--99-999999999
Q T0636 301 ---------KDAGQ------------FGL-HHHIRISIGRE--ED-NDRLLAALA 330 (336)
Q Consensus 301 ---------r~~~~------------fg~-~~~iRis~~~~--ee-~~~l~~aL~ 330 (336)
-|... .|. ++.||+|+|.+ || .+.|.+||+
T Consensus 356 lGg~eSLi~~P~~~~h~~~~~e~r~~~Gi~~~lvRlSvGlEd~eDLi~Dl~~AL~ 410 (412)
T 2cb1_A 356 LGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALE 410 (412)
T ss_dssp CSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred ECCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 7576623557731033128999998669795969999720999999999999983
No 120
>3bv0_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; biotin biosynthesis, pyridoxal phosphate, S-adenosyl-L-methionine; HET: PLP; 2.21A {Mycobacterium tuberculosis}
Probab=99.64 E-value=1.7e-13 Score=105.77 Aligned_cols=312 Identities=11% Similarity=0.069 Sum_probs=181.5
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCCCCC-----CHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 66553573576--54888-7689999999998750058898-----6189999999984888543886077889999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRYPFD-----AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Ypd~-----~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
.+++.||..++ -+.+| -.|.+.+|+.+.+..+...+.. ...+|-+.+++...-.-++++.+++++|+....+
T Consensus 53 ~G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseA~e~Al 132 (437)
T 3bv0_A 53 QPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAA 132 (437)
T ss_dssp EEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHH
T ss_conf 99999875027897740899899999999999752786478757699999999999867755315872486028999999
Q ss_pred HHH---------CCC-CEEECCCCCHHHHH-HHHHHCC-------------CEEEECC-CCCCCC-CHHHHHH---HC--
Q ss_conf 984---------699-25763887356999-9998188-------------0364155-435677-8899973---00--
Q T0636 85 AEF---------SSM-RFVTAWPGFDGYRA-RIAVSGL-------------RHFEIGL-TDDLLL-DPNDLAQ---VS-- 133 (336)
Q Consensus 85 ~~~---------~~~-~vii~~P~y~~y~~-~~~~~g~-------------~~~~vp~-~~~~~~-d~~~l~~---~~-- 133 (336)
+.. ++. .++...-+|-+-.. .....+. .....|. ..++.. +.+.+++ ..
T Consensus 133 klAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 212 (437)
T 3bv0_A 133 KMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG 212 (437)
T ss_dssp HHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSSCCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999987528999977999828877776201121356677677788877776567889875434455789999986078
Q ss_pred CHHHHHHHCC-CCCCCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCC----CHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf 0243133036-633222223----79999999737872-02521002588662----00332452001202346523343
Q T0636 134 RDDCVVLANP-SNPTGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRA----RGLAYGENELVFRSFSKSYGLAG 203 (336)
Q Consensus 134 ~~~~i~l~nP-nNPTG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~----~~l~~~~n~iv~~S~SK~~gl~G 203 (336)
+..++++.-| .+.-|...+ .+++.++|++++.+ |+||++..|...-. ......|+++ +|||.+|-.+
T Consensus 213 ~iaAviiep~i~~~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv---t~~K~l~gG~ 289 (437)
T 3bv0_A 213 ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM---CVGKALTGGY 289 (437)
T ss_dssp GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE---EECGGGGTTS
T ss_pred CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHH---HHHCCCCCCC
T ss_conf 6459998556257899767997999999999997298489766776898877742010278688644---1102145677
Q ss_pred CCCEEECCCHHHHHHHHHCC-------CCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHC---CC-E
Q ss_conf 45313117889999997337-------87787777899999997459--999999999999999999999858---97-8
Q T0636 204 LRLGALFGPSELIAAMKRKQ-------WFCNVGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGL---GY-R 270 (336)
Q Consensus 204 lRiG~~i~~~~~i~~l~~~~-------~~~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~~~r~~l~~~l~~l---g~-~ 270 (336)
+-+|.+++.+++.+.+.... .+|+-|.++..++.+.|+-- +.+.+ +..+.-+++.+.|+.+ .. .
T Consensus 290 ~p~~av~~~~~i~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~p~V~ 366 (437)
T 3bv0_A 290 LSLAATLCTADVAHTISAGAAGALMRGPTFMANPLACAVSVASVELLLGQDWRT---RITELAAGLTAGLDTARALPAVT 366 (437)
T ss_dssp SCCEEEEEEHHHHHHHHCC--------CTTTTCHHHHHHHHHHHHHHHTTTHHH---HHHHHHHHHHHHHGGGGGCTTEE
T ss_pred CCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH---HHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 655888774999975146888762105656788799999999999996014999---99999999999999752499889
Q ss_pred EECCCCCEEEEEC---CCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHHC
Q ss_conf 6169864788656---988999999987693896077888887478874---7989999999999999842
Q T0636 271 VASSEANFVLVEN---AAGERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 271 ~~~s~~~Fi~~~~---~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e~ 335 (336)
-....|.|+.+++ .+...+.+.|.++||+++++ .+.+|++- -|++|+++++++|+|...+
T Consensus 367 ~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gvl~~~~-----~~~l~~~Ppl~it~~eid~~~~~l~e~l~~ 432 (437)
T 3bv0_A 367 DVRVCGAIGVIECDRPVDLAVATPAALDRGVWLRPF-----RNLVYAMPPYICTPAEITQITSAMVEVARL 432 (437)
T ss_dssp EEEEETTEEEEEESSCCCHHHHHHHHHTTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEECC-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 774145399999478131999999999699189416-----998999799889899999999999999998
No 121
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.64 E-value=4.6e-13 Score=102.89 Aligned_cols=207 Identities=14% Similarity=0.179 Sum_probs=141.8
Q ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHH----HHCCCEEEECCCCCC
Q ss_conf 986189999999984888543886077889999999984--69925763887356999999----818803641554356
Q T0636 49 FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIA----VSGLRHFEIGLTDDL 122 (336)
Q Consensus 49 d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~----~~g~~~~~vp~~~~~ 122 (336)
.|....|.++||+..|- +.-++++.+..||..++.++ +||+|++....|......++ .+|+++..+...
T Consensus 64 nPt~~~le~~la~Legg--~~a~~~sSGmaAi~~~l~~~~~~gd~vi~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~--- 138 (398)
T 1gc0_A 64 NPTLNLLEARMASLEGG--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA--- 138 (398)
T ss_dssp CHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT---
T ss_pred CHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC---
T ss_conf 86899999999998399--7079972635887744303478999799703567726899887653125544568977---
Q ss_pred CCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
Q ss_conf 7788999730--002431330366332222237999999973787-2025210025886620033245200120234652
Q T0636 123 LLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSY 199 (336)
Q Consensus 123 ~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~ 199 (336)
|++.+++. .++++||+=+|.|||..+.+.+.|.+++++++. +|||..++. +.-..++...-+ ||+.|.||.+
T Consensus 139 --d~~~~~~~i~~~tklI~~EspsNP~l~v~Di~~i~~iA~~~g~~lvVDnT~at--P~~~~Pl~~GaD-iVvhS~TKyi 213 (398)
T 1gc0_A 139 --DLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCT--PYLQRPLELGAD-LVVHSATKYL 213 (398)
T ss_dssp --CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTH--HHHCCGGGGTCS-EEEEETTTTT
T ss_pred --CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC--CCEECCCCCCCC-EEEEECCEEE
T ss_conf --89999986587761899946788665655769999999981992884055345--450056535577-7995032553
Q ss_pred CCCC-CCCEEECCCHHHHHHHHH--CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 3343-453131178899999973--3787--7877778999999974599999999999999999999998589
Q T0636 200 GLAG-LRLGALFGPSELIAAMKR--KQWF--CNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLG 268 (336)
Q Consensus 200 gl~G-lRiG~~i~~~~~i~~l~~--~~~~--~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg 268 (336)
|--| +=.|.++++.+.+.+++. .+.. ..++......+..-|+. +..++++..++...+.+.|++..
T Consensus 214 ~GhsDv~~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~da~ll~rgl~T---l~lR~~~~~~nA~~lA~~L~~hp 284 (398)
T 1gc0_A 214 SGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT---LNLRMDRHCANAQVLAEFLARQP 284 (398)
T ss_dssp TCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 146626876246778999999999999804887886888998707307---89999999888999999997476
No 122
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma- family, lyase; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.64 E-value=1.9e-13 Score=105.32 Aligned_cols=274 Identities=18% Similarity=0.191 Sum_probs=169.0
Q ss_pred CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHH----HHHCCCEEEECCCCC
Q ss_conf 8986189999999984888543886077889999999984--6992576388735699999----981880364155435
Q T0636 48 PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARI----AVSGLRHFEIGLTDD 121 (336)
Q Consensus 48 pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~----~~~g~~~~~vp~~~~ 121 (336)
..|....|.+.||+..|- +.-++++.+..||..++.++ +||+|++....|.+....+ ..+|+.+..+...++
T Consensus 112 ~NPT~~~LE~~lA~LEgg--~~al~fsSGMAAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~~~~~Gi~~~~~d~~~~ 189 (445)
T 1qgn_A 112 GNPTTVVLEEKISALEGA--ESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADV 189 (445)
T ss_dssp CCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCH
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCH
T ss_conf 886799999999998399--738996589999999999617899979975666424667775320246724653377742
Q ss_pred CCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHC
Q ss_conf 67788999730002431330366332222237999999973787-20252100258866200332452001202346523
Q T0636 122 LLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYG 200 (336)
Q Consensus 122 ~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~g 200 (336)
. +..+.....++++||+=+|.|||..+.+.+.|.+++++++. +|||..+.. +.-..++...-+ ||+.|.||.++
T Consensus 190 ~--~~~~~~~~~~t~lv~~EspsNP~l~v~Di~~ia~iA~~~g~~lvVDNT~at--P~~~~PL~~GAD-IVvhS~TKyi~ 264 (445)
T 1qgn_A 190 G--ALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFAT--PLNQKALALGAD-LVLHSATKFLG 264 (445)
T ss_dssp H--HHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTC--TTTCCTTTTTCS-EEEECTTTTTT
T ss_pred H--HHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCC--CCCCCCHHHCCC-EEEEEEEEECC
T ss_conf 7--788764046640899506899776556779999999872997998778426--155875231776-89986223047
Q ss_pred CCCC-CCEEECCCHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEE-CC
Q ss_conf 3434-5313117889999997337877--8777789999999745999999999999999999999985897--861-69
Q T0636 201 LAGL-RLGALFGPSELIAAMKRKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY--RVA-SS 274 (336)
Q Consensus 201 l~Gl-RiG~~i~~~~~i~~l~~~~~~~--~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~~-~s 274 (336)
-.|= =.|.+++++++++.++..+..+ .++.........-|+. +..++++..++...+.+.|++... +|+ |+
T Consensus 265 Ghsdv~gG~v~~~~~~~~~~~~~~~~~G~~lsp~da~lllrGL~T---L~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPg 341 (445)
T 1qgn_A 265 GHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEAHPKVRHVYYPG 341 (445)
T ss_dssp CSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG---HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTT
T ss_pred CCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHH---HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 887631231331145777887630566762798999999851538---99999999999999999996099852797887
Q ss_pred ----------------CCCEEEEECC-CHHHHHHHHHHCCCEE-------------EECC------------CCCC-CCE
Q ss_conf ----------------8647886569-8899999998769389-------------6077------------8888-874
Q T0636 275 ----------------EANFVLVENA-AGERTLRFLRERGIQV-------------KDAG------------QFGL-HHH 311 (336)
Q Consensus 275 ----------------~~~Fi~~~~~-~~~~~~~~L~~~gi~v-------------r~~~------------~fg~-~~~ 311 (336)
.|..+-+++. +.+...+++..-.++- -|.. ..|. ++.
T Consensus 342 L~s~p~~~la~~~~~G~Gg~lSf~l~g~~~~a~~f~d~Lklf~~a~SlGg~~SLi~~pa~~sh~~l~~eer~~~Gi~~~l 421 (445)
T 1qgn_A 342 LQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNL 421 (445)
T ss_dssp SSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSE
T ss_pred CCCCHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCE
T ss_conf 45765599998358998679999977999999999980884724426688751135751004422899999966989296
Q ss_pred EEEEECCH--HH-HHHHHHHHHH
Q ss_conf 78874798--99-9999999999
Q T0636 312 IRISIGRE--ED-NDRLLAALAE 331 (336)
Q Consensus 312 iRis~~~~--ee-~~~l~~aL~~ 331 (336)
||+|+|.+ ++ .+.|.+||++
T Consensus 422 iRlSVGLEd~eDLiaDL~qAL~~ 444 (445)
T 1qgn_A 422 VRFSFGVEDFDDLKADILQALDS 444 (445)
T ss_dssp EEEECCSSCHHHHHHHHHHHHHH
T ss_pred EEEEEEECCHHHHHHHHHHHHHC
T ss_conf 99986009999999999999843
No 123
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.63 E-value=1.1e-12 Score=100.55 Aligned_cols=271 Identities=18% Similarity=0.199 Sum_probs=167.6
Q ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHH----HHCCCEEEECCCCCC
Q ss_conf 986189999999984888543886077889999999984--69925763887356999999----818803641554356
Q T0636 49 FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIA----VSGLRHFEIGLTDDL 122 (336)
Q Consensus 49 d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~----~~g~~~~~vp~~~~~ 122 (336)
.|....|.++||+..|- +.-++++.+..||..++.++ +||+|++....|........ ..|+.+..+...
T Consensus 51 nPt~~~le~~la~LEg~--~~a~~fsSGMAAi~~~l~~ll~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~~--- 125 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG--- 125 (386)
T ss_dssp CHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT---
T ss_pred CHHHHHHHHHHHHHHCC--CCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCC---
T ss_conf 87899999999998399--8378835779999999997237998899616754754888752034654999970289---
Q ss_pred CCCHHHHHH--HCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
Q ss_conf 778899973--0002431330366332222237999999973787-2025210025886620033245200120234652
Q T0636 123 LLDPNDLAQ--VSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSY 199 (336)
Q Consensus 123 ~~d~~~l~~--~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~ 199 (336)
|.+.+++ ..++++||+=+|.|||..+.+.+.+.+++++++. +|||..++. +.-..++...-+ ||+.|.||.+
T Consensus 126 --d~~~~~~~~~~~t~~i~~EtpsNP~l~v~Di~~i~~ia~~~g~~~vVDnT~at--P~~~~Pl~~GaD-ivvhS~TKy~ 200 (386)
T 1cs1_A 126 --DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLS--PALQNPLALGAD-LVLHSCTKYL 200 (386)
T ss_dssp --CHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTC--TTTCCGGGGTCS-EEEEETTTTT
T ss_pred --CHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCC--CCCCCCCCCCCC-EEEECCCEEE
T ss_conf --88999986088860899716899754335589998889874986999788558--133444114898-9997255110
Q ss_pred CCCC-CCCEEECC-CHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EE-E
Q ss_conf 3343-45313117-889999997337877--8777789999999745999999999999999999999985897--86-1
Q T0636 200 GLAG-LRLGALFG-PSELIAAMKRKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY--RV-A 272 (336)
Q Consensus 200 gl~G-lRiG~~i~-~~~~i~~l~~~~~~~--~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~-~ 272 (336)
+--| +=.|.+++ ++++.+.+...+..+ .++......+...|+. +..+.++..++...+.+.|++... +| |
T Consensus 201 ~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~~~~p~da~ll~rgl~T---L~lRm~~~~~nA~~lA~~L~~hp~V~~V~y 277 (386)
T 1cs1_A 201 NGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---LVPRMELAQRNAQAIVKYLQTQPLVKKLYH 277 (386)
T ss_dssp TCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTTCTTEEEEEC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 68876556754568467665666654124654542328999742132---031899999999999999850898768857
Q ss_pred CC----------------CCCEEEEEC-CCHHHHHHHHHHCCCEE-------------EECC--C----------CCC-C
Q ss_conf 69----------------864788656-98899999998769389-------------6077--8----------888-8
Q T0636 273 SS----------------EANFVLVEN-AAGERTLRFLRERGIQV-------------KDAG--Q----------FGL-H 309 (336)
Q Consensus 273 ~s----------------~~~Fi~~~~-~~~~~~~~~L~~~gi~v-------------r~~~--~----------fg~-~ 309 (336)
|+ .|..+.+.+ .+.+.+.+++..-.++- -|.. . .|. +
T Consensus 278 Pgl~s~p~h~l~~~~~~g~gg~~sf~~~~~~~~a~~f~~~l~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~ 357 (386)
T 1cs1_A 278 PSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISE 357 (386)
T ss_dssp TTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCT
T ss_pred CCCCCCCCHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCC
T ss_conf 89888803777863158985277642059899999999708826456366876514306731245227999998669892
Q ss_pred CEEEEEECC--HHH-HHHHHHHHHHH
Q ss_conf 747887479--899-99999999999
Q T0636 310 HHIRISIGR--EED-NDRLLAALAEY 332 (336)
Q Consensus 310 ~~iRis~~~--~ee-~~~l~~aL~~~ 332 (336)
+.||+|+|. .+| .+.|.+||+..
T Consensus 358 ~liRlSvGlEd~eDLi~DL~~AL~aa 383 (386)
T 1cs1_A 358 TLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp TEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 96999970199999999999999986
No 124
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, pyridoxal phosphate, PSI-2, protein structure initiative; 1.70A {Deinococcus radiodurans}
Probab=99.62 E-value=3.2e-12 Score=97.47 Aligned_cols=319 Identities=15% Similarity=0.124 Sum_probs=180.9
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHC-----CCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 66553573576--54888-768999999999875005-----88986189999999984888543886077889999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINR-----YPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~-----Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
.+++.||..++ -+.+| -.|.+.+|+++.+.++.. ++.+...+|-+.+++..+-+.+.++.+++++|+...++
T Consensus 27 dG~~ylD~~~g~g~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~v~~~~sGseA~e~Ai 106 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAV 106 (430)
T ss_dssp TSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHH
T ss_conf 98999988633898870899699999999998656875667546099999999999866998145994286589999999
Q ss_pred HH---H------CCC-CEEECCCCCHHHHHHHH-HHCC--------------CEEEECCCCCCCC---CHHHHHHH---C
Q ss_conf 98---4------699-25763887356999999-8188--------------0364155435677---88999730---0
Q T0636 85 AE---F------SSM-RFVTAWPGFDGYRARIA-VSGL--------------RHFEIGLTDDLLL---DPNDLAQV---S 133 (336)
Q Consensus 85 ~~---~------~~~-~vii~~P~y~~y~~~~~-~~g~--------------~~~~vp~~~~~~~---d~~~l~~~---~ 133 (336)
+. + +|. .|+....+|-+....+. ..+. .+..+|....... +.+.+.+. .
T Consensus 107 klAr~~~~~~~~tgr~~Ii~~~~~yHG~t~~a~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
T 3i4j_A 107 KLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLERE 186 (430)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999788638999888999868868798886433688755555567666776677776410123135799999999972
Q ss_pred -CHH-HHHHHCC-C-CCCCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCC-CH----HHHCCCHHHHHHHHHHH
Q ss_conf -024-3133036-6-33222223----79999999737872-02521002588662-00----33245200120234652
Q T0636 134 -RDD-CVVLANP-S-NPTGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRA-RG----LAYGENELVFRSFSKSY 199 (336)
Q Consensus 134 -~~~-~i~l~nP-n-NPTG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~-~~----l~~~~n~iv~~S~SK~~ 199 (336)
..+ +.++..| - .-.|...+ .+++++++++++.+ |+||++..|..... .. ....|+++ ++||.+
T Consensus 187 ~~~~iaavi~Ep~~~~~~G~~~p~~~~l~~lr~lc~~~gillI~DEV~tGfgr~g~~~~~~~~~gv~PDiv---~~gK~l 263 (430)
T 3i4j_A 187 GPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIA---VLGKGL 263 (430)
T ss_dssp CGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEE---EECGGG
T ss_pred CCCCEEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCE---EECCHH
T ss_conf 99874799963545578986689879999999998525964885266436775776327888639898715---664300
Q ss_pred CCCC-CCCEEECCCHHHHHHHHHC------CCCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH-HHHHHHHHHHCCC
Q ss_conf 3343-4531311788999999733------787787777899999997459--9999999999999-9999999985897
Q T0636 200 GLAG-LRLGALFGPSELIAAMKRK------QWFCNVGTLDLHALEAALDND--RAREAHIAKTLAQ-RRRVADALRGLGY 269 (336)
Q Consensus 200 gl~G-lRiG~~i~~~~~i~~l~~~------~~~~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~~~-r~~l~~~l~~lg~ 269 (336)
| .| .-++.+++.+++.+.+..- ..+|+-+.++..++.+.|+.- +.+.+++++.-.. ++.+.+..++.++
T Consensus 264 ~-~G~~p~~~v~~~~~i~~~~~~~~~~~~h~~T~~g~pl~~aaa~a~L~~i~~~~~~~~v~~~g~~l~~~l~~l~~~~~~ 342 (430)
T 3i4j_A 264 A-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQ 342 (430)
T ss_dssp T-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred C-CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 3-676651123206999986447876664067889986999999999998524459999999977789999999976898
Q ss_pred EE-ECCCCCEEEEECC------------CHHHHHHHHHHCCCEEEECCCCC---CCCEEEEEEC---CHHHHHHHHHHHH
Q ss_conf 86-1698647886569------------88999999987693896077888---8874788747---9899999999999
Q T0636 270 RV-ASSEANFVLVENA------------AGERTLRFLRERGIQVKDAGQFG---LHHHIRISIG---REEDNDRLLAALA 330 (336)
Q Consensus 270 ~~-~~s~~~Fi~~~~~------------~~~~~~~~L~~~gi~vr~~~~fg---~~~~iRis~~---~~ee~~~l~~aL~ 330 (336)
.. ....|.++-+.+. .+..+.+.+.++|++++++.... ..++||++-. |++|++.++++++
T Consensus 343 i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~ir~~Ppl~it~~eid~~~~~l~ 422 (430)
T 3i4j_A 343 MMQVRGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLA 422 (430)
T ss_dssp EEEEEEETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 58995367599999732555755458899999999999789789425665667878889995898889999999999999
Q ss_pred HHHHC
Q ss_conf 99842
Q T0636 331 EYSDH 335 (336)
Q Consensus 331 ~~~e~ 335 (336)
+.+++
T Consensus 423 ~al~e 427 (430)
T 3i4j_A 423 GALED 427 (430)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99998
No 125
>3e6g_A Xometc, cystathionine gamma-lyase-like protein; bacterial blight, cystathionine lyase, reverse transsulfuration pathway; 2.80A {Xanthomonas oryzae PV}
Probab=99.62 E-value=4.6e-13 Score=102.86 Aligned_cols=209 Identities=17% Similarity=0.152 Sum_probs=137.6
Q ss_pred CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-CCCCEEECCCCCHHHHH-----HHHHHCCCEEEECCCCC
Q ss_conf 8986189999999984888543886077889999999984-69925763887356999-----99981880364155435
Q T0636 48 PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRA-----RIAVSGLRHFEIGLTDD 121 (336)
Q Consensus 48 pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-~~~~vii~~P~y~~y~~-----~~~~~g~~~~~vp~~~~ 121 (336)
..|....|.++||+..|- .+.++..+| ..++..++..+ +||++++..+.|.+... ..+..|+.+..+...
T Consensus 65 ~nPt~~~le~~la~Leg~-~~a~~~sSG-mAa~~~~l~~l~~Gd~vv~~~~~yg~t~~~~~~~~~~~~gi~~~~~d~~-- 140 (400)
T 3e6g_A 65 HNPTRFAYERCVAALEGG-TRAFAFASG-MAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT-- 140 (400)
T ss_dssp CCHHHHHHHHHHHHHHTC-SEEEEESSH-HHHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHHHHHHHCCEEEEECTT--
T ss_pred CCHHHHHHHHHHHHHHCC-CEEEECCCH-HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCEEEEEEECCC--
T ss_conf 887799999999997398-536653646-7799999875158988997479878710115000024641799981699--
Q ss_pred CCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHH
Q ss_conf 67788999730--002431330366332222237999999973787-202521002588662003324520012023465
Q T0636 122 LLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKS 198 (336)
Q Consensus 122 ~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~ 198 (336)
|++.+++. .++++||+=+|.|||..+.+.+.|.+++++++. +|||..++. +.-..++...-+ ||+.|+||.
T Consensus 141 ---d~~~~~~ai~~~t~li~~EspsNP~l~v~Di~~i~~iA~~~gi~~vVDnT~at--P~~~~Pl~~GaD-iVvhS~TKy 214 (400)
T 3e6g_A 141 ---DPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFAS--PMLQRPLSLGAD-LVVHSATKY 214 (400)
T ss_dssp ---CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECSSSC--TTTCCGGGGTCS-EEEEETTTT
T ss_pred ---CHHHHHHHCCCCCEEEEECCCCCCCEEECCHHHHHHHHHHCCCEEEEECCCCC--HHCCCCHHCCCC-EEEEECCCC
T ss_conf ---98999975376855999517899740005669999999875986998156443--000575020799-899955502
Q ss_pred HCCCCCCC-EEECC--CHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 23343453-13117--889999997337877--8777789999999745999999999999999999999985897
Q T0636 199 YGLAGLRL-GALFG--PSELIAAMKRKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY 269 (336)
Q Consensus 199 ~gl~GlRi-G~~i~--~~~~i~~l~~~~~~~--~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~ 269 (336)
++--|--+ |.++. ++.+.+.++..+..+ .++......+...|+. +..+.++..++...+.+.|+....
T Consensus 215 i~Gh~d~~~G~vv~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T---L~lRm~~~~~nA~~lA~~L~~hp~ 287 (400)
T 3e6g_A 215 LNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT---LPLRMRAHCENALALAQWLETHPA 287 (400)
T ss_dssp TTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred CCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 2688853212253177188899999999871786887899999854072---999999999999999999976888
No 126
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resistance, structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi NT} PDB: 3gwp_A*
Probab=99.62 E-value=8.7e-14 Score=107.59 Aligned_cols=261 Identities=11% Similarity=0.111 Sum_probs=152.6
Q ss_pred HHHHHHHHHH-HHH-----HCC--CCCCHHHHHHHHHHHHCCCHHHEEE-ECCHHHHHHHHHHHH--CCCCEEECCC-CC
Q ss_conf 9999999998-750-----058--8986189999999984888543886-077889999999984--6992576388-73
Q T0636 32 RVQAAIAAAA-ARI-----NRY--PFDAEPRVMRKLAEHFSCPEDNLML-VRGIDECFDRISAEF--SSMRFVTAWP-GF 99 (336)
Q Consensus 32 ~v~~al~~~~-~~~-----~~Y--pd~~~~~Lr~aia~~~~v~~d~I~~-t~Gs~~~i~~~~~~~--~~~~vii~~P-~y 99 (336)
.|++|+.++- .+. ..| .|.+...|.+.+|+.+|...--+.+ ...++.++..++.++ +||+|++.+. -|
T Consensus 47 ~Vl~a~~~~~~~~~~~~~~~Gy~y~d~~r~~LE~~~A~l~G~E~ALv~p~f~SGt~An~~aL~all~pGDeIl~~~~~~~ 126 (427)
T 3i16_A 47 KVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPY 126 (427)
T ss_dssp HHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 99999996565410167777888787538999999999849954673067650999999999983799998997778766
Q ss_pred HHHHH-----------HHHHHCCCEEEECCCCCCCCCHHHHHHHC--CHHHHHHHCCCCCCC---CCCCHHHHHHHHH--
Q ss_conf 56999-----------99981880364155435677889997300--024313303663322---2223799999997--
Q T0636 100 DGYRA-----------RIAVSGLRHFEIGLTDDLLLDPNDLAQVS--RDDCVVLANPSNPTG---QALSAGELDQLRQ-- 161 (336)
Q Consensus 100 ~~y~~-----------~~~~~g~~~~~vp~~~~~~~d~~~l~~~~--~~~~i~l~nPnNPTG---~~~~~~~l~~l~~-- 161 (336)
..+.. .+..+|+++..++..++..+|++++++.. +++.+++..++||.+ .+++.++|.++++
T Consensus 127 ~t~~~v~g~t~~~~~~~l~~~Gi~~~~vd~~~~~~~D~~~l~~aI~~~tk~~~v~~~~s~~~~~~~~~~i~dI~~i~~~~ 206 (427)
T 3i16_A 127 DTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCV 206 (427)
T ss_dssp GGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 52053044688999988987391799857987666699999987254577699997069876677742499999999999
Q ss_pred -H--CC-CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCC-EEECCCHHHHHHHHHCCCCCCCCH---HHH
Q ss_conf -3--78-720252100258866200332452001202346523343453-131178899999973378778777---789
Q T0636 162 -R--AG-KLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRL-GALFGPSELIAAMKRKQWFCNVGT---LDL 233 (336)
Q Consensus 162 -~--~~-~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRi-G~~i~~~~~i~~l~~~~~~~~~~~---~~~ 233 (336)
. .+ .+++|.+|..+..... ++...-+ +|++|+||.+|--|..+ ||++++++++++.+......++.. .+.
T Consensus 207 k~~~~~i~v~vDn~~g~~~~~~~-Pl~~GaD-iv~~SltK~lgG~~a~~GG~IaG~kelIe~a~~~l~a~g~~~~~g~~~ 284 (427)
T 3i16_A 207 KNIRKDIICFVDNCYGEFMDTKE-PTDVGAD-LIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTF 284 (427)
T ss_dssp HHHCTTSEEEEECTTTTTSSSSC-GGGGTCS-EEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCT
T ss_pred HHCCCCCEEEECCCCCCCCCCCC-CHHHCCC-EEEEEEHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 85146866982487665222445-4543788-799998101689867547999736999999877752887677642377
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC----C-EEEEECCCHHHHHHHHH
Q ss_conf 9999997459999999999999999999999858978616986----4-78865698899999998
Q T0636 234 HALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEA----N-FVLVENAAGERTLRFLR 294 (336)
Q Consensus 234 ~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~----~-Fi~~~~~~~~~~~~~L~ 294 (336)
......++.-......+.+-.+...++.+.|+++|+.++|... . ..-+.+.+.+.+..++.
T Consensus 285 ~~~r~~~qGl~~~p~~v~~a~k~a~~~a~~le~~g~~~~P~~~~~~~dii~~~~~g~~e~~~~F~~ 350 (427)
T 3i16_A 285 GVVRSMYQGLFLAPHISMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFNDKDKLIEFCK 350 (427)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCEEEECSSHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
T ss_conf 899999657225389999999999999999997699879999988763189996699799999999
No 127
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.60 E-value=5.3e-12 Score=96.04 Aligned_cols=296 Identities=14% Similarity=0.118 Sum_probs=181.6
Q ss_pred CHHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCCCEEECCCCCHHHHH
Q ss_conf 689999999998750058--8986189999999984888543886077889999999984---69925763887356999
Q T0636 30 EPRVQAAIAAAAARINRY--PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSMRFVTAWPGFDGYRA 104 (336)
Q Consensus 30 ~~~v~~al~~~~~~~~~Y--pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~~vii~~P~y~~y~~ 104 (336)
...-++++.+.+..-+.+ .-+.-.++.+.+|+++|.+ ..+.++.++.|+.+++.++ +||+|+++.-+|..-..
T Consensus 16 ~~~e~~~~~~~l~sg~~~~~~G~~v~~fE~~~a~~~g~k--~av~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~ 93 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAA--HALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQ 93 (388)
T ss_dssp CHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHH
T ss_pred CHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCC--EEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHH
T ss_conf 999999999999749924358989999999999997879--599957889999999998499983999978984734257
Q ss_pred HHHHHCCCEEEECCCC-CCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCC
Q ss_conf 9998188036415543-567788999730--002431330366332222237999999973787202-521002588662
Q T0636 105 RIAVSGLRHFEIGLTD-DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLI-DETYVDYSSFRA 180 (336)
Q Consensus 105 ~~~~~g~~~~~vp~~~-~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~Iv-DeaY~~f~~~~~ 180 (336)
.+...|..++.+..++ ++.+|++.+++. .+++++++ -+..|...+.+++.++++++++.++ |.+..-++...-
T Consensus 94 ~i~~~g~~pv~~Dv~~~~~~~d~~~~~~~~~~~tk~i~~---v~~~g~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g 170 (388)
T 1b9h_A 94 AAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIMP---VHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQG 170 (388)
T ss_dssp HHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECC---BCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETT
T ss_pred HHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCC---CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEECC
T ss_conf 897569889985044454568999999885056424534---35667654577889999980982331212113815899
Q ss_pred CHHHHCCCHHHHHHH--HHHHCCCCCCCEEECC-CHHHHHHHHHCCCC-----------------C--CCCHHHHHHHHH
Q ss_conf 003324520012023--4652334345313117-88999999733787-----------------7--877778999999
Q T0636 181 RGLAYGENELVFRSF--SKSYGLAGLRLGALFG-PSELIAAMKRKQWF-----------------C--NVGTLDLHALEA 238 (336)
Q Consensus 181 ~~l~~~~n~iv~~S~--SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~~-----------------~--~~~~~~~~aa~~ 238 (336)
..+..... +.+.|| +|..+ .| .=|.++. ++++.+.++..+.. + .++.+....+..
T Consensus 171 ~~~G~~gd-~~~~Sf~~~K~i~-~g-~GG~i~t~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rm~~l~Aaig~~ 247 (388)
T 1b9h_A 171 KRVGELDS-IATFSFQNGKLMT-AG-EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRA 247 (388)
T ss_dssp EEGGGSSS-CEEEECCTTSSSC-SS-SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHH
T ss_pred EEECCCCC-EEEECCCCCCCCC-CC-CCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHH
T ss_conf 87135534-2321366554676-76-781787289899999999997389978876420102366666642466999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEC--CC----CC--E-EEEECCCH---HHHHHHHHHCCCEEEECCC
Q ss_conf 97459999999999999999999999858-978616--98----64--7-88656988---9999999876938960778
Q T0636 239 ALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVAS--SE----AN--F-VLVENAAG---ERTLRFLRERGIQVKDAGQ 305 (336)
Q Consensus 239 ~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~--s~----~~--F-i~~~~~~~---~~~~~~L~~~gi~vr~~~~ 305 (336)
.|+.-+ +..++-++...++.+.|+++ ++.... .. .. | ++++.... +.+.+.|.++||-++....
T Consensus 248 qL~~l~---~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~L~~~gI~~~~~y~ 324 (388)
T 1b9h_A 248 QLARLD---EQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFR 324 (388)
T ss_dssp HHTTHH---HHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 999999---99999999999999970379984046657665520001000233012246899999999987998753684
Q ss_pred C----------C------------C-------CCEEEEEEC---C-HHHHHHHHHHHHHHHHCC
Q ss_conf 8----------8------------8-------874788747---9-899999999999998429
Q T0636 306 F----------G------------L-------HHHIRISIG---R-EEDNDRLLAALAEYSDHS 336 (336)
Q Consensus 306 f----------g------------~-------~~~iRis~~---~-~ee~~~l~~aL~~~~e~~ 336 (336)
+ + + ++.+.+-.. + ++|+++.+++|++...+|
T Consensus 325 plh~~~~f~~~~~~~~~~~~~~~~~Pna~~i~~~~l~LP~~~~Lt~e~di~~I~~~i~~~l~~~ 388 (388)
T 1b9h_A 325 AIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVARA 388 (388)
T ss_dssp CGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred CHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 2213978886498744443334679899999829898648999998999999999999999619
No 128
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.59 E-value=3.8e-12 Score=96.91 Aligned_cols=317 Identities=12% Similarity=0.111 Sum_probs=178.0
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCC-C----CCCHHHHHHHHHHHHCC-CHHHEEEECCHHHHHHHH
Q ss_conf 66553573576--54888-7689999999998750058-8----98618999999998488-854388607788999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRY-P----FDAEPRVMRKLAEHFSC-PEDNLMLVRGIDECFDRI 83 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Y-p----d~~~~~Lr~aia~~~~v-~~d~I~~t~Gs~~~i~~~ 83 (336)
.+++.||+..+ .+.+| -.|.+.+|+.+.++.+... + .+...+|-+.+.+...- ..+.++.+++++|+...+
T Consensus 39 dG~~ylD~~~g~g~~~lGh~~p~i~~av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~~~~sGseA~e~A 118 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENA 118 (426)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHH
T ss_pred CCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
T ss_conf 97999985728886400489699999999998646776665335607999999987554311453344214652034554
Q ss_pred HHH---HCCC-CEEECCCCCHHHHHHH-HHHCCC-------------EEEECCC-CCCCCCH-------HHHHHH--CCH
Q ss_conf 998---4699-2576388735699999-981880-------------3641554-3567788-------999730--002
Q T0636 84 SAE---FSSM-RFVTAWPGFDGYRARI-AVSGLR-------------HFEIGLT-DDLLLDP-------NDLAQV--SRD 135 (336)
Q Consensus 84 ~~~---~~~~-~vii~~P~y~~y~~~~-~~~g~~-------------~~~vp~~-~~~~~d~-------~~l~~~--~~~ 135 (336)
++. +.+. .++...-+|-+....+ ...+.. ....+.. ....... .++... ...
T Consensus 119 ik~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (426)
T 1sff_A 119 VKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPE 198 (426)
T ss_dssp HHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 34444342334168436887788542100014567765788988887535677621235321001467777776404677
Q ss_pred H-HHHHHCCCCC-CCCCCC-H---HHHHHHHHHCCCC-CCCCCCCCCCCCCCC----HHHHCCCHHHHHHHHHHHCCCCC
Q ss_conf 4-3133036633-222223-7---9999999737872-025210025886620----03324520012023465233434
Q T0636 136 D-CVVLANPSNP-TGQALS-A---GELDQLRQRAGKL-LIDETYVDYSSFRAR----GLAYGENELVFRSFSKSYGLAGL 204 (336)
Q Consensus 136 ~-~i~l~nPnNP-TG~~~~-~---~~l~~l~~~~~~~-IvDeaY~~f~~~~~~----~l~~~~n~iv~~S~SK~~gl~Gl 204 (336)
+ +.++..|=.- .|...+ . +.|.+++++++.+ |+||+...|...-.. .....|+++ ++||..| .|+
T Consensus 199 ~iaavivEpi~~~~G~~~~~~~~l~~lr~lc~~~gillI~DEV~tG~gRtg~~~~~~~~~v~PDi~---~~gK~lg-gG~ 274 (426)
T 1sff_A 199 DIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT---TFAKSIA-GGF 274 (426)
T ss_dssp GEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE---EECGGGG-TSS
T ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCHHHHCCCCCCCE---EECHHCC-CCC
T ss_conf 178999667537889605878999999999987193898544133566664431465569783130---0011115-886
Q ss_pred CCEEECCCHHHHHHHHHCC--CCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHH-HHHHHHHHHHHCCCE-EECCCCCE
Q ss_conf 5313117889999997337--8778777789999999745--9999999999999-999999999858978-61698647
Q T0636 205 RLGALFGPSELIAAMKRKQ--WFCNVGTLDLHALEAALDN--DRAREAHIAKTLA-QRRRVADALRGLGYR-VASSEANF 278 (336)
Q Consensus 205 RiG~~i~~~~~i~~l~~~~--~~~~~~~~~~~aa~~~l~~--~~~~~~~~~~~~~-~r~~l~~~l~~lg~~-~~~s~~~F 278 (336)
.+|.+++.+++.+.+.... .+|+-|.++..++.+.|+- .+.+.++.+..-. -++.+.+.+++.++. -....|.+
T Consensus 275 P~~av~~~~~i~~~~~~~~~~~T~~g~p~~~aAa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~i~~VrG~Gl~ 354 (426)
T 1sff_A 275 PLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAM 354 (426)
T ss_dssp CCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTE
T ss_pred CCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECEE
T ss_conf 52899982564303379999879898878999999999999872110122100123456667889868963789744549
Q ss_pred EEEEC--------CC---HHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHHC
Q ss_conf 88656--------98---8999999987693896077888887478874---7989999999999999842
Q T0636 279 VLVEN--------AA---GERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 279 i~~~~--------~~---~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e~ 335 (336)
+-+.+ ++ ...+.+.|.++||+++++.. ..+.+|++. -|++|++++++++++.+++
T Consensus 355 ~~ief~~~~~~~~~d~~~~~~~~~~l~~~Gll~~~~g~--~~n~ir~~PpL~it~~eid~~l~~l~~al~e 423 (426)
T 1sff_A 355 IAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEIISQCFDE 423 (426)
T ss_dssp EEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999426666775699999999999978988952478--8888999799888999999999999999999
No 129
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (acoat), structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.59 E-value=6.3e-13 Score=102.01 Aligned_cols=314 Identities=14% Similarity=0.116 Sum_probs=177.4
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC--CCHHHEEEECCHHHHHHHHHHHH
Q ss_conf 66553573576--54888-768999999999875005889861899999999848--88543886077889999999984
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFS--CPEDNLMLVRGIDECFDRISAEF 87 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~--v~~d~I~~t~Gs~~~i~~~~~~~ 87 (336)
.+++.||+.++ -+.+| -.|.+++|+.+.++++...+.....++...+|+.+. .+.+.+..+++++++....++..
T Consensus 38 dG~~yiD~~~g~g~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~SGseA~e~Aik~a 117 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIA 117 (397)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
T ss_conf 97999985538886101689799999999999745676674126699999999887588662887477628999999999
Q ss_pred ---C------CCCEEECCCCCHHHHH-HHHHHCCCEEEE------CCCCCC-CCCHHHHHHHCCHH-HHHHHCC-CCCCC
Q ss_conf ---6------9925763887356999-999818803641------554356-77889997300024-3133036-63322
Q T0636 88 ---S------SMRFVTAWPGFDGYRA-RIAVSGLRHFEI------GLTDDL-LLDPNDLAQVSRDD-CVVLANP-SNPTG 148 (336)
Q Consensus 88 ---~------~~~vii~~P~y~~y~~-~~~~~g~~~~~v------p~~~~~-~~d~~~l~~~~~~~-~i~l~nP-nNPTG 148 (336)
. ...++....+|-+... .....|.+.... |....+ .-+++++++....+ +.+|..| .+..|
T Consensus 118 r~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~sg~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~iaavIiEpv~~~~G 197 (397)
T 2ord_A 118 RKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESG 197 (397)
T ss_dssp HHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTT
T ss_pred HHHHCCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCC
T ss_conf 99737678776448831388778865540136884345788899998434486609999973689767999961567889
Q ss_pred CCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCCCH----HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
Q ss_conf 2223----79999999737872-0252100258866200----3324520012023465233434531311788999999
Q T0636 149 QALS----AGELDQLRQRAGKL-LIDETYVDYSSFRARG----LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAM 219 (336)
Q Consensus 149 ~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~~~----l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l 219 (336)
...+ .++|.++|++++.+ |+||+...|+..-... ....|+++ +|||..| .|+.+|-+++..++. .+
T Consensus 198 ~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~gv~PDi~---~~gK~lg-gg~p~~a~~~~~~~~-~~ 272 (397)
T 2ord_A 198 IVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL---TTAKGLG-GGVPIGAVIVNERAN-VL 272 (397)
T ss_dssp CEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEEEECSTTC-CC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCE---EECHHHC-CCCCEEEEEEHHHHH-CC
T ss_conf 770998999999999987296899713240786557452204789894413---3122435-997237888813453-17
Q ss_pred HHC--CCCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH-HHHHHHHHHHCCCEE-ECCCCCEEEEEC---CCHHHHH
Q ss_conf 733--787787777899999997459--9999999999999-999999998589786-169864788656---9889999
Q T0636 220 KRK--QWFCNVGTLDLHALEAALDND--RAREAHIAKTLAQ-RRRVADALRGLGYRV-ASSEANFVLVEN---AAGERTL 290 (336)
Q Consensus 220 ~~~--~~~~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~~~-r~~l~~~l~~lg~~~-~~s~~~Fi~~~~---~~~~~~~ 290 (336)
... ..+|+-+.++..++.+.|+.- +.+.+++++.-.. ++.+.+..++.++.. ....|.++-+.+ ....++.
T Consensus 273 ~~~~~~~T~~g~p~a~AAa~a~L~~i~~~~~~~~v~~~g~~l~~~l~~l~~~~~~v~~vrg~G~~~~i~~~~~~~~~~~~ 352 (397)
T 2ord_A 273 EPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEVSNREVA 352 (397)
T ss_dssp CTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTSCHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEEEECCCCCHHHHH
T ss_conf 78781878860699999999999999867869999999999999999999868984778775519999976877669999
Q ss_pred HHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHHC
Q ss_conf 99987693896077888887478874---7989999999999999842
Q T0636 291 RFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 291 ~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e~ 335 (336)
..+.++|+++++.. .+.+|++. -+++|++++++++++..++
T Consensus 353 ~~~~~~Gll~~~~g----~~~i~~~Ppl~it~~eid~~i~~l~~alk~ 396 (397)
T 2ord_A 353 TKCFENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp HHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99997898997279----998999798688999999999999999955
No 130
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.59 E-value=1.8e-12 Score=99.11 Aligned_cols=286 Identities=13% Similarity=0.116 Sum_probs=162.3
Q ss_pred HCCC-CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCC--------EEEC-CCCCHHHHHHHHHHCCC
Q ss_conf 0588-986189999999984888543886077889999999984--6992--------5763-88735699999981880
Q T0636 45 NRYP-FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMR--------FVTA-WPGFDGYRARIAVSGLR 112 (336)
Q Consensus 45 ~~Yp-d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~--------vii~-~P~y~~y~~~~~~~g~~ 112 (336)
..|. ++...+|.+++++++|. +.++.+++++++...++.++ +|+. +++. .-.|......+...|..
T Consensus 68 ~~y~~~~~~~~le~~~a~~~g~--~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 145 (467)
T 2oqx_A 68 EAYSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCT 145 (467)
T ss_dssp CCSSSCHHHHHHHHHHHHHHCC--SEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHCC--CEEEECCCCHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCCHHHHHHHCCCE
T ss_conf 1015893199999999998699--87999997199999999999861741447787757985077660237999981985
Q ss_pred EEEECCCC----------CCCCCHHHHHHHC------CHHHHHHHCCCCCCC-CCCCHHH---HHHHHHHCCC-CCCCCC
Q ss_conf 36415543----------5677889997300------024313303663322-2223799---9999973787-202521
Q T0636 113 HFEIGLTD----------DLLLDPNDLAQVS------RDDCVVLANPSNPTG-QALSAGE---LDQLRQRAGK-LLIDET 171 (336)
Q Consensus 113 ~~~vp~~~----------~~~~d~~~l~~~~------~~~~i~l~nPnNPTG-~~~~~~~---l~~l~~~~~~-~IvDea 171 (336)
.+.++.+. ...+|++++++.. +..++++.++||..| ...+.+. +.++|+++++ +++|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~a~~~~~~l~~D~a 225 (467)
T 2oqx_A 146 VRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSA 225 (467)
T ss_dssp EEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 52146523456654454456659999998863368664127998554202750447999999999999984998999674
Q ss_pred CCC------------CCCCCCCHHHH---CCCHHHHHHHHHHHCCCCCCCEEECCCHHHH-HHHH---HC---CC----C
Q ss_conf 002------------58866200332---4520012023465233434531311788999-9997---33---78----7
Q T0636 172 YVD------------YSSFRARGLAY---GENELVFRSFSKSYGLAGLRLGALFGPSELI-AAMK---RK---QW----F 225 (336)
Q Consensus 172 Y~~------------f~~~~~~~l~~---~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i-~~l~---~~---~~----~ 225 (336)
..- +.+.....+.. ..--++..|++|.+ .+.+-|+++.+.+.+ +..+ .. .. .
T Consensus 226 ~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~s~s~~K~~--~~~~gG~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 303 (467)
T 2oqx_A 226 RFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDA--MVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTY 303 (467)
T ss_dssp THHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTT--CCSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCC
T ss_pred CHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCC--CCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 5553001012454222687531114555567888994687766--66776513127177777776542036545665001
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEC-------C-----CHHHHHHHH
Q ss_conf 7877778999999974599999999999999999999998589786169864788656-------9-----889999999
Q T0636 226 CNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVEN-------A-----AGERTLRFL 293 (336)
Q Consensus 226 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~Fi~~~~-------~-----~~~~~~~~L 293 (336)
.+.+.....+....+.. ....+..++....-+++.+.|++.++.+.+..+++++++. + ........+
T Consensus 304 ~~~~~~~~~a~~~~l~~-~~~~~~~~~r~~~a~~L~~~L~~~~~~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~ 382 (467)
T 2oqx_A 304 GGLEGGAMERLAVGLYD-GMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELY 382 (467)
T ss_dssp CCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHTTCCEEEECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 13566799999999887-77779999999999999999986699545777641464237656887665542488999999
Q ss_pred HHCCCEEE-EC------------CCCCCCCEEEEEEC----CHHHHHHHHHHHHHHHHC
Q ss_conf 87693896-07------------78888874788747----989999999999999842
Q T0636 294 RERGIQVK-DA------------GQFGLHHHIRISIG----REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 294 ~~~gi~vr-~~------------~~fg~~~~iRis~~----~~ee~~~l~~aL~~~~e~ 335 (336)
.+.|+... .+ ..+...+.+|+|+. |+||+++++++|+++.++
T Consensus 383 ~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRl~ip~~~~T~eeiD~vve~l~~v~~~ 441 (467)
T 2oqx_A 383 KVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp HHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 97294201376654454555686566766607986788889999999999999999997
No 131
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.59 E-value=3.7e-14 Score=109.99 Aligned_cols=305 Identities=12% Similarity=0.113 Sum_probs=164.4
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHH-----------HCCCC--CCHHHHHHHHHHHHCCCHH-HEEEECCHHHHH-HHHH
Q ss_conf 3576548887689999999998750-----------05889--8618999999998488854-388607788999-9999
Q T0636 20 LAFNENPEAVEPRVQAAIAAAAARI-----------NRYPF--DAEPRVMRKLAEHFSCPED-NLMLVRGIDECF-DRIS 84 (336)
Q Consensus 20 L~~Nenp~~p~~~v~~al~~~~~~~-----------~~Ypd--~~~~~Lr~aia~~~~v~~d-~I~~t~Gs~~~i-~~~~ 84 (336)
.+||.-|-..|++|+++|.+.+.+. ||=|+ .-..+.|+.|++.++++.+ .|++++|+..+. ..+.
T Consensus 6 ~~F~PGP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~v~~~~gsgt~~~ea~~ 85 (362)
T 2c0r_A 6 YNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIP 85 (362)
T ss_dssp EECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
T ss_conf 57558988999999999999865220468643344778989999999999999999689998789996688418999998
Q ss_pred HHHC--CCCEEECCCCCHH--HHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCH-HHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 9846--9925763887356--9999998188036415543567788999730002-431330366332222237999999
Q T0636 85 AEFS--SMRFVTAWPGFDG--YRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRD-DCVVLANPSNPTGQALSAGELDQL 159 (336)
Q Consensus 85 ~~~~--~~~vii~~P~y~~--y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~-~~i~l~nPnNPTG~~~~~~~l~~l 159 (336)
..+. ++.+++..-+..+ +...++..|..+..+....+...+.+.+++..+. +.+. -+|-||...+..++..+
T Consensus 86 ~~l~~~~~~v~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~~~~~~~~i~~~ 162 (362)
T 2c0r_A 86 MNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAY---LHLTSNETIEGAQFKAF 162 (362)
T ss_dssp HHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEE---EEEESEETTTTEECSSC
T ss_pred HCCCCCCCCCEEEECCCEECHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCE---EEEECCCCCCCEEEEEE
T ss_conf 614567873226622620020267665327500110123333452342676513577506---99602544422168651
Q ss_pred HHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHH------------HHHHCC-CC
Q ss_conf 973787-2025210025886620033245200120234652334345313117889999------------997337-87
Q T0636 160 RQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIA------------AMKRKQ-WF 225 (336)
Q Consensus 160 ~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~------------~l~~~~-~~ 225 (336)
+++++. +++|.+-. +....... .. -+ +.+-|.+|.++.||. .++++.++++.+ ...+.. ..
T Consensus 163 ~~~~~~l~~vDa~ss-~~~~~id~-~~-~d-v~~~~sqK~~~~p~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (362)
T 2c0r_A 163 PDTGSVPLIGDMSSD-ILSRPFDL-NQ-FG-LVYAGAQKNLGPSGV-TVVIVREDLVAESPKHLPTMLRYDTYVKNNSLY 237 (362)
T ss_dssp CCCTTSCEEEECTTT-TTSSCCCG-GG-CS-EEEEETTTTTCCSSC-EEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCS
T ss_pred CCCCCCEEEEEECCC-CCCCCCCC-CC-CC-EEEEECCCCCCCCCC-CEEEEEHHHHHHCCCCCCCCCCHHHHHHCCCCC
T ss_conf 146783389852254-32103444-44-53-379960422003787-179977898751655532323035553100014
Q ss_pred CCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCC---EEEC----CCCCEEEEECC---CHHHHHHH
Q ss_conf 78777789999999745---999999999999999999999985897---8616----98647886569---88999999
Q T0636 226 CNVGTLDLHALEAALDN---DRAREAHIAKTLAQRRRVADALRGLGY---RVAS----SEANFVLVENA---AGERTLRF 292 (336)
Q Consensus 226 ~~~~~~~~~aa~~~l~~---~~~~~~~~~~~~~~r~~l~~~l~~lg~---~~~~----s~~~Fi~~~~~---~~~~~~~~ 292 (336)
.+.......+...++.. ..-.....++.+..+..+.......+. .... |.+. +-+.++ ++.++.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~v-~~f~~~~~~~~~~~~~~ 316 (362)
T 2c0r_A 238 NTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMN-ITFRLASEELEKEFVKA 316 (362)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSE-EEEECSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEE-EEEECCCCCCHHHHHHH
T ss_conf 55422011222136766640242889999888888766555421565434566843256438-99976882259999999
Q ss_pred HHHCCCEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 9876938960778888874788747---989999999999999842
Q T0636 293 LRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 293 L~~~gi~vr~~~~fg~~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
|.++||.++.| ++.-+-+|||+. +.||+++|+++|++|..+
T Consensus 317 l~~~Gi~~~~G--~~~~g~~Ris~~~~~t~edv~~Li~~l~~~~~~ 360 (362)
T 2c0r_A 317 SEQEGFVGLKG--HRSVGGLRASIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp HHHTTEESCBC--CTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEECCC--CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99788873269--885783889814889999999999999999996
No 132
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotransferase; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis; HET: PLP; 1.91A {Salmonella typhimurium LT2} PDB: 2pb0_A*
Probab=99.59 E-value=4.2e-12 Score=96.64 Aligned_cols=308 Identities=16% Similarity=0.158 Sum_probs=178.5
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHC----CCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHH
Q ss_conf 66553573576--54888-768999999999875005----889861899999999848885438860778899999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINR----YPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISA 85 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~----Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~ 85 (336)
.+++.||+..+ -+.+| -.|.+++|+++.+.++.. |+.+...+|-+.|.+..+ .+.+..+++++++.....+
T Consensus 55 dG~~ylD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~lae~L~~~~~--~~~~~f~~sGsea~e~a~~ 132 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANETAFK 132 (420)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC--CCCEEECCCCCHHHHHHHH
T ss_conf 97999995308887764589699999999998667777663138999999999861067--0006542565278789999
Q ss_pred H---H------C-CCCEEECCCCCHHHHHHH-HHHCCC------------EEEECCCCCCCCCHHHHHHHCCHH-HHHHH
Q ss_conf 8---4------6-992576388735699999-981880------------364155435677889997300024-31330
Q T0636 86 E---F------S-SMRFVTAWPGFDGYRARI-AVSGLR------------HFEIGLTDDLLLDPNDLAQVSRDD-CVVLA 141 (336)
Q Consensus 86 ~---~------~-~~~vii~~P~y~~y~~~~-~~~g~~------------~~~vp~~~~~~~d~~~l~~~~~~~-~i~l~ 141 (336)
. + . ...|+....+|-+....+ ...|.. +..+|. .|.+++++..+.+ +.++.
T Consensus 133 ~a~~~~~~~~~~~r~~ii~~~g~yHG~t~~~~~~tg~~~~~~~~~~~~~~~~~~p~-----~~~~~~~~~~~~~iAavii 207 (420)
T 2pb2_A 133 LARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMDDHTCAVVV 207 (420)
T ss_dssp HHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCCTTEEEEEE
T ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC-----CCHHHHHHHCCCCEEEEEE
T ss_conf 99987764279998679999688068855542467995445788899998699548-----8328999844897689999
Q ss_pred CCCCC-CCCCCC-H---HHHHHHHHHCCCCCC-CCCCCCCCCCCCCH----HHHCCCHHHHHHHHHHHCCCCCCCEEECC
Q ss_conf 36633-222223-7---999999973787202-52100258866200----33245200120234652334345313117
Q T0636 142 NPSNP-TGQALS-A---GELDQLRQRAGKLLI-DETYVDYSSFRARG----LAYGENELVFRSFSKSYGLAGLRLGALFG 211 (336)
Q Consensus 142 nPnNP-TG~~~~-~---~~l~~l~~~~~~~Iv-DeaY~~f~~~~~~~----l~~~~n~iv~~S~SK~~gl~GlRiG~~i~ 211 (336)
.|=-- .|.... + ++|.++|++++.++| ||++..|+..-... ....|+++ +|||.+| .|+.+|.+++
T Consensus 208 EPi~g~~G~~~~~~~yl~~l~~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~---~~gK~l~-gG~p~~av~~ 283 (420)
T 2pb2_A 208 EPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL---TSAKALG-GGFPVSAMLT 283 (420)
T ss_dssp CSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---EEEECCC-CCCCCCCEEC
T ss_conf 64568889816999999999999998499899615550778226765333677233447---8832035-8765543122
Q ss_pred CHHHHHHHHHCC--CCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHH-HHHHHHHHHHHHCCC-EEECCCCCEEEEECC-
Q ss_conf 889999997337--8778777789999999745--999999999999-999999999985897-861698647886569-
Q T0636 212 PSELIAAMKRKQ--WFCNVGTLDLHALEAALDN--DRAREAHIAKTL-AQRRRVADALRGLGY-RVASSEANFVLVENA- 284 (336)
Q Consensus 212 ~~~~i~~l~~~~--~~~~~~~~~~~aa~~~l~~--~~~~~~~~~~~~-~~r~~l~~~l~~lg~-~~~~s~~~Fi~~~~~- 284 (336)
.+++.+.+.... .+|+-+.++..++.+.|+. .+.+.++++++- .-++.+.+..++.++ .-....|.++-+++.
T Consensus 284 ~~~i~~~~~~~~~~~T~~g~pla~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~i~~Vrg~Glm~~i~~~~ 363 (420)
T 2pb2_A 284 TQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKP 363 (420)
T ss_dssp CHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECG
T ss_pred CHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEEEEEC
T ss_conf 37676244777767788998156666677788887557999999999999999999986489816776435499999847
Q ss_pred ----CHHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHHC
Q ss_conf ----88999999987693896077888887478874---7989999999999999842
Q T0636 285 ----AGERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 ----~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e~ 335 (336)
.+.++.+.+.++|++++++. .+.+|++- -+++|++++++++++..++
T Consensus 364 ~~~~~~~~~~~~~~e~Gll~~~~g----~~~ir~~PpL~it~~eId~~l~~l~~al~~ 417 (420)
T 2pb2_A 364 KYKGRARDFLYAGAEAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp GGTTCHHHHHHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 835799999999997894894279----998999389778999999999999999999
No 133
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.59 E-value=2.3e-14 Score=111.36 Aligned_cols=306 Identities=13% Similarity=0.096 Sum_probs=159.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHH-------CCCCCC------HHHHHHHHHHHHCCCHH-HEEEECCHHHHHHHHHHH
Q ss_conf 5765488876899999999987500-------588986------18999999998488854-388607788999999998
Q T0636 21 AFNENPEAVEPRVQAAIAAAAARIN-------RYPFDA------EPRVMRKLAEHFSCPED-NLMLVRGIDECFDRISAE 86 (336)
Q Consensus 21 ~~Nenp~~p~~~v~~al~~~~~~~~-------~Ypd~~------~~~Lr~aia~~~~v~~d-~I~~t~Gs~~~i~~~~~~ 86 (336)
|||.-|-..|+.|++++.+...+.. .+.+.+ +.+.|+.++++++++++ .|++++|+..+...+...
T Consensus 6 nF~pGP~~~p~~Vlea~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~e~r~~l~~~~~~~~~~~i~~~~gt~~~~~~~~~~ 85 (360)
T 1w23_A 6 NFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPM 85 (360)
T ss_dssp ECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
T ss_conf 70798858899999999999976404786544467678899999999999999996899987899948878999999976
Q ss_pred H---CCCCEEECCCCCHHH--HHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 4---699257638873569--99999818803641554356778899973000243133036633222223799999997
Q T0636 87 F---SSMRFVTAWPGFDGY--RARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQ 161 (336)
Q Consensus 87 ~---~~~~vii~~P~y~~y--~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~ 161 (336)
. .++.+++...+...- ...+...+..+.....+++-..+++.+.. +++...++.-+|-||.+.+..++.++++
T Consensus 86 ~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~n~tG~~~~i~~I~~i~~ 163 (360)
T 1w23_A 86 NLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSE--FQLNENDAYLHITSNNTIYGTQYQNFPE 163 (360)
T ss_dssp HHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGG--CCCCTTEEEEEEESEETTTTEECSSCCC
T ss_pred HHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC--CCCCCCCCCEEEECCEEECCCCEEEECC
T ss_conf 41257886515531204433478888764032110234457663000012--3433432100352667722431232013
Q ss_pred HCC-CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHH-------------HHHHHHCCCCCC
Q ss_conf 378-720252100258866200332452001202346523343453131178899-------------999973378778
Q T0636 162 RAG-KLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSEL-------------IAAMKRKQWFCN 227 (336)
Q Consensus 162 ~~~-~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~-------------i~~l~~~~~~~~ 227 (336)
+++ ++|||-+=. ++.. ++...+--+.+.+++|.++.||.= |.++..+.. ............
T Consensus 164 ~~~~l~ivDavqs-~g~~---~id~~~~~~d~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (360)
T 1w23_A 164 INHAPLIADMSSD-ILSR---PLKVNQFGMIYAGAQKNLGPSGVT-VVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNT 238 (360)
T ss_dssp CCSSCEEEECTTT-TTSS---CCCGGGCSEEEEETTTTTSCTTCE-EEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSC
T ss_pred CCCEEEEEEECCC-CCCC---CCCCCCCCEEEEECCCCCCCCCCC-CEEEECHHHHCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 4421587610113-3555---432234420354024333456654-0356013342246311221235667642100221
Q ss_pred CCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEC-----CCCCEEEEECCC---HHHHHHHHH
Q ss_conf 77778999999974---5999999999999999999999985897--8616-----986478865698---899999998
Q T0636 228 VGTLDLHALEAALD---NDRAREAHIAKTLAQRRRVADALRGLGY--RVAS-----SEANFVLVENAA---GERTLRFLR 294 (336)
Q Consensus 228 ~~~~~~~aa~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~~~-----s~~~Fi~~~~~~---~~~~~~~L~ 294 (336)
-......++...+. .........+.....+............ .... |.++ +.+.+++ .+.+...|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~v-v~f~~~~~~~~~~~~~~l~ 317 (360)
T 1w23_A 239 PPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMN-VTFNLRNEELNQQFLAKAK 317 (360)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSE-EEEECSSHHHHHHHHHHHH
T ss_pred CCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEE-EEEECCCCCCHHHHHHHHH
T ss_conf 001000113567766541100378999999998777888774455414778842361479-9998699746899999999
Q ss_pred HCCCEEEECCCCCCCCEEEEEE-C--CHHHHHHHHHHHHHHHHCC
Q ss_conf 7693896077888887478874-7--9899999999999998429
Q T0636 295 ERGIQVKDAGQFGLHHHIRISI-G--REEDNDRLLAALAEYSDHS 336 (336)
Q Consensus 295 ~~gi~vr~~~~fg~~~~iRis~-~--~~ee~~~l~~aL~~~~e~~ 336 (336)
++||.++.|. +.-+.+|+|+ . |.||+++|+++|+||.++.
T Consensus 318 ~~Gi~~~~Gh--r~~g~vRiS~~~~~t~e~v~~L~~~~~~~~~~~ 360 (360)
T 1w23_A 318 EQGFVGLNGH--RSVGGCRASIYNAVPIDACIALRELMIQFKENA 360 (360)
T ss_dssp HTTEESCBCC--TTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHC
T ss_pred HCCCEEECCC--CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 7898663077--766707899438999999999999999998569
No 134
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, cytoplasm, one-carbon metabolism, pyridoxal phosphate; 1.60A {Burkholderia pseudomallei}
Probab=99.58 E-value=7.4e-12 Score=95.07 Aligned_cols=323 Identities=17% Similarity=0.209 Sum_probs=204.8
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH--HHCCCCCCH-------HHH----HHHHHHHHCCCHHH
Q ss_conf 11578975036655357357654888768999999999875--005889861-------899----99999984888543
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPFDAE-------PRV----MRKLAEHFSCPEDN 69 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~--~~~Ypd~~~-------~~L----r~aia~~~~v~~d~ 69 (336)
|.++++.+...-..-|.|=-.||- .+|.|++++-..+.. .-.||..-+ +++ .+...+.++..--+
T Consensus 20 i~~~i~~E~~rq~~~l~LiaSEN~--~S~~v~~a~gS~l~nkYaeG~pg~ryy~G~~~iD~iE~la~~ra~~lF~a~~an 97 (425)
T 3ecd_A 20 VRGAILKELERQQSQVELIASENI--VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHAN 97 (425)
T ss_dssp HHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCCC--CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999768748637886--799999985684226466889996365887439999999999999854997536
Q ss_pred EEEECCHHHHHHHHHHHH-CCCCEEECCCCCHHHHHH-----HHHHCCCEEEECCCCC-CCCCHHHHHHH---CCHHHHH
Q ss_conf 886077889999999984-699257638873569999-----9981880364155435-67788999730---0024313
Q T0636 70 LMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRAR-----IAVSGLRHFEIGLTDD-LLLDPNDLAQV---SRDDCVV 139 (336)
Q Consensus 70 I~~t~Gs~~~i~~~~~~~-~~~~vii~~P~y~~y~~~-----~~~~g~~~~~vp~~~~-~~~d~~~l~~~---~~~~~i~ 139 (336)
|-.-+|++..+......+ +||+|+..++.-.++... ....+.+.+.++.+++ +.+|.+++++. .++|+|+
T Consensus 98 vqp~SGs~An~av~~all~pGD~il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~~~~~~~IDyd~~~~~a~~~kPklIi 177 (425)
T 3ecd_A 98 VQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLII 177 (425)
T ss_dssp CCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 76685599999999985699998998553458875756666654217887885452466750199999998651998799
Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCC-CC--CCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCC-HH
Q ss_conf 30366332222237999999973787-20252100-25--8866200332452001202346523343453131178-89
Q T0636 140 LANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DY--SSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGP-SE 214 (336)
Q Consensus 140 l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~-~f--~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~-~~ 214 (336)
+..=..| ..++-+++.++++..+. +++|-+.. .+ ++..+.++... + ||..|.-|++ +|=|-|.++.+ ++
T Consensus 178 ~G~S~y~--r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~pnPl~~a-D-vvt~tTHKTL--rGPrgGiIl~~~~~ 251 (425)
T 3ecd_A 178 AGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHA-H-VVTSTTHKTL--RGPRGGFVLTNDEE 251 (425)
T ss_dssp EECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC-S-EEEEESSGGG--CCCSCEEEEESCHH
T ss_pred ECCCCCC--CCCCHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCCCCCCC-C-EEECCCCCCC--CCCCCEEEEECCHH
T ss_conf 6762576--635799999778863967860345577775256789920024-0-5865245456--78884289846778
Q ss_pred HHHHHHHCCCCCCCCH--HHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC--CCCCEEEEECC---
Q ss_conf 9999973378778777--78999999-974--59999999999999999999999858978616--98647886569---
Q T0636 215 LIAAMKRKQWFCNVGT--LDLHALEA-ALD--NDRAREAHIAKTLAQRRRVADALRGLGYRVAS--SEANFVLVENA--- 284 (336)
Q Consensus 215 ~i~~l~~~~~~~~~~~--~~~~aa~~-~l~--~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~--s~~~Fi~~~~~--- 284 (336)
+.+++.+..-|...+. +...++++ ++. ....+.++.+++..+.+.|.+.|.+.|+++.. ++...+|+++.
T Consensus 252 ~~~kI~~avfPg~qggph~~~iAa~aval~Ea~~~~f~~Ya~qVv~NAkaLa~~L~~~G~~vv~ggTdnH~vlvd~~~~~ 331 (425)
T 3ecd_A 252 IAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKG 331 (425)
T ss_dssp HHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCC
T ss_conf 99998655196545671266799999999997088899999999999999998875189279717987656999706778
Q ss_pred -CHHHHHHHHHHCCCEEE----ECCC--CCCCCEEEEEE------C-CHHHHHHHHHHHHHHH
Q ss_conf -88999999987693896----0778--88887478874------7-9899999999999998
Q T0636 285 -AGERTLRFLRERGIQVK----DAGQ--FGLHHHIRISI------G-REEDNDRLLAALAEYS 333 (336)
Q Consensus 285 -~~~~~~~~L~~~gi~vr----~~~~--fg~~~~iRis~------~-~~ee~~~l~~aL~~~~ 333 (336)
++....+.|.+.||.+. |++. +..+..|||.. | .++||+.+.+.+.+..
T Consensus 332 ~~g~~a~~~Le~~gI~vNkn~iP~d~~~~~~~sGiRlGT~a~TtrG~~e~dm~~iA~lI~~~l 394 (425)
T 3ecd_A 332 LKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVF 394 (425)
T ss_dssp CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 879999999874898975785889998899998526577899848998899999999999999
No 135
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* 2vmr_A* 2vms_A* 2vmt_A* 2vmu_A* 2vmq_A* ...
Probab=99.57 E-value=3.3e-12 Score=97.35 Aligned_cols=323 Identities=18% Similarity=0.254 Sum_probs=205.7
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH--HHCCCC------CCHHHHHHHHH-----HHHCCCHHH
Q ss_conf 11578975036655357357654888768999999999875--005889------86189999999-----984888543
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPF------DAEPRVMRKLA-----EHFSCPEDN 69 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~--~~~Ypd------~~~~~Lr~aia-----~~~~v~~d~ 69 (336)
|.+.++++...-.+.|.|--.||. ++|.+++++...+.. .-.||. -.+..-.|.+| +.++..--+
T Consensus 11 i~~li~~e~~rq~~~l~LiaSEN~--~S~~v~~a~~S~l~nkYaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a~~an 88 (405)
T 2vi8_A 11 VFAAIEQERKRQHAKIELIASENF--VSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHAN 88 (405)
T ss_dssp HHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCCC--CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999749358727875--789999985574247676889983433776249999999999999981898555
Q ss_pred EEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHH-----HHHHHCCCEEEECCCC-CCCCCHHHHHHH---CCHHHH
Q ss_conf 886077889999999984--69925763887356999-----9998188036415543-567788999730---002431
Q T0636 70 LMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA-----RIAVSGLRHFEIGLTD-DLLLDPNDLAQV---SRDDCV 138 (336)
Q Consensus 70 I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~-----~~~~~g~~~~~vp~~~-~~~~d~~~l~~~---~~~~~i 138 (336)
|-..+|++..+.. +.++ +||+|+.+.+.-.++.. .........+.++.+. .+.+|.+++++. .|+|+|
T Consensus 89 vqp~SGs~An~av-~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~iD~d~~~~~a~~~kPklI 167 (405)
T 2vi8_A 89 VQPHSGAQANMAV-YFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLI 167 (405)
T ss_dssp CCCSSHHHHHHHH-HHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEE
T ss_pred CCCCCCHHHHHHH-HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECHHHHHHHHHHCCCCEE
T ss_conf 4467637889999-998607998799841577873345554555545788676555545583628999999984398457
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCC-CC--CCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHH
Q ss_conf 330366332222237999999973787-20252100-25--886620033245200120234652334345313117889
Q T0636 139 VLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DY--SSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSE 214 (336)
Q Consensus 139 ~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~-~f--~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~ 214 (336)
++..=..| ..++-+++.++++..+. +++|-+.. .+ ++..+.++... + +|..|.-|+| +|=|=|.+.++++
T Consensus 168 i~G~S~y~--~~~d~~~~~eiad~vga~l~~D~sHi~GLIa~g~~~~Pl~~a-d-vvt~sTHKTl--~GPrgGiI~~~~~ 241 (405)
T 2vi8_A 168 VAAAAAYP--RIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYA-H-FVTTTTHKTL--RGPRGGMILCQEQ 241 (405)
T ss_dssp EECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTC-S-EEEEESSSTT--CCCSCEEEEECHH
T ss_pred EECCCCCC--CCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCHHHHH-C-CEECCCCCCC--CCCCCCEEEECCH
T ss_conf 63134688--877899999998772969871034566653566439978761-5-2312125656--6888736885534
Q ss_pred HHHHHHHCCCCCCCCH--HHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC--CCCEEEEECC---
Q ss_conf 9999973378778777--78999999-9745--99999999999999999999998589786169--8647886569---
Q T0636 215 LIAAMKRKQWFCNVGT--LDLHALEA-ALDN--DRAREAHIAKTLAQRRRVADALRGLGYRVASS--EANFVLVENA--- 284 (336)
Q Consensus 215 ~i~~l~~~~~~~~~~~--~~~~aa~~-~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s--~~~Fi~~~~~--- 284 (336)
..+++.+..-|...+. +...++.+ ++.. ...+.++.+++..+.+.|.+.|.+.|+++... +...+|+++.
T Consensus 242 ~~~~i~~avfPg~qg~~h~~~iaa~aval~ea~~~~~~~Ya~qvv~NA~aLa~~L~~~G~~v~~ggTd~H~vlvdl~~~~ 321 (405)
T 2vi8_A 242 FAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQ 321 (405)
T ss_dssp HHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCC
T ss_conf 67888865087766774157789999999997186899999999999999999997389779718987746520023456
Q ss_pred -CHHHHHHHHHHCCCEEE----ECCC--CCCCCEEEEEE------C-CHHHHHHHHHHHHHHHH
Q ss_conf -88999999987693896----0778--88887478874------7-98999999999999984
Q T0636 285 -AGERTLRFLRERGIQVK----DAGQ--FGLHHHIRISI------G-REEDNDRLLAALAEYSD 334 (336)
Q Consensus 285 -~~~~~~~~L~~~gi~vr----~~~~--fg~~~~iRis~------~-~~ee~~~l~~aL~~~~e 334 (336)
++....+.|.+.||.+. |++. +..+..|||.. | .++||+++.+.+.+..+
T Consensus 322 ~~g~~a~~~Le~agI~vNkn~iP~d~~~~~~~sGiRiGT~~~T~rG~~e~dm~~iA~~I~~~l~ 385 (405)
T 2vi8_A 322 LTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK 385 (405)
T ss_dssp CCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 7399999999983928777858899999998872165688998489988999999999999995
No 136
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to P3F inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.57 E-value=2.2e-12 Score=98.51 Aligned_cols=270 Identities=14% Similarity=0.144 Sum_probs=168.2
Q ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHH----HHCCCEEEECCCCCC
Q ss_conf 986189999999984888543886077889999999984--69925763887356999999----818803641554356
Q T0636 49 FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIA----VSGLRHFEIGLTDDL 122 (336)
Q Consensus 49 d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~----~~g~~~~~vp~~~~~ 122 (336)
.|....|.++||+..|- +..++++.+..||..++.++ +||+|++..+.|.+....+. .+|+++..+...
T Consensus 81 nPt~~~le~~la~LE~~--~~a~~~sSGMaAI~~~~~~ll~~Gd~iv~~~~~Yg~T~~ll~~~l~~~Gi~~~~~d~~--- 155 (415)
T 2fq6_A 81 TLTHFSLQQAMCELEGG--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL--- 155 (415)
T ss_dssp CHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT---
T ss_pred CHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCC---
T ss_conf 86599999999998298--6189844879999999874057999476478786479999999877338044635999---
Q ss_pred CCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHH
Q ss_conf 7788999730--002431330366332222237999999973---78720252100258866200332452001202346
Q T0636 123 LLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQR---AGKLLIDETYVDYSSFRARGLAYGENELVFRSFSK 197 (336)
Q Consensus 123 ~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~---~~~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK 197 (336)
|.+++++. .+++++|+-+|.|||..+.+.+.+.++++. +..+|||..++. +.-..++...-+ ||+.|.+|
T Consensus 156 --d~e~~~~~i~~~t~~v~~EspsNP~l~v~Di~~i~~~a~~~~~g~~vvVDnT~at--p~~~~Pl~~GaD-ivvhS~TK 230 (415)
T 2fq6_A 156 --IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAA--GVLFKALDFGID-VSIQAATK 230 (415)
T ss_dssp --CGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTT--TTSSCGGGGTCS-EEEEETTT
T ss_pred --CHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCC--CEEEECCCCCCE-EEEEECCC
T ss_conf --9899997627551399972588876421362999999875057966999778655--101110248862-89970650
Q ss_pred HHCC-CCCCCEEECCCHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EE-
Q ss_conf 5233-4345313117889999997337877--8777789999999745999999999999999999999985897--86-
Q T0636 198 SYGL-AGLRLGALFGPSELIAAMKRKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY--RV- 271 (336)
Q Consensus 198 ~~gl-~GlRiG~~i~~~~~i~~l~~~~~~~--~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~- 271 (336)
.++- ..+=.|.++++++..+.++..+..+ .++.........-| +-+..++++..++..++.+.|+.... +|
T Consensus 231 y~~Ghsdv~gG~vv~~~~~~~~~~~~~~~~G~~~~p~~a~ll~rgl---~TL~~R~~r~~~nA~~vA~~L~~hp~V~~V~ 307 (415)
T 2fq6_A 231 YLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGL---RTLGVRLRQHHESSLKVAEWLAEHPQVARVN 307 (415)
T ss_dssp TTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred EECCCCCCCCCCEECCCHHHHHHHHHEECCCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 1268888878855003023332001101157667827899998447---6899999999999999999985189855456
Q ss_pred ECC-----------------CCCE-EEEEC-CCHHHHHHHHHHCCCEE------------E-E----------CCCCCC-
Q ss_conf 169-----------------8647-88656-98899999998769389------------6-0----------778888-
Q T0636 272 ASS-----------------EANF-VLVEN-AAGERTLRFLRERGIQV------------K-D----------AGQFGL- 308 (336)
Q Consensus 272 ~~s-----------------~~~F-i~~~~-~~~~~~~~~L~~~gi~v------------r-~----------~~~fg~- 308 (336)
||. .|.+ +.++. .+.+++.+++..-.++- - | -...|.
T Consensus 308 yPgl~s~p~~~~a~~~~~g~~G~~sf~l~~~~~~e~~~~f~~~L~lf~~a~SlG~~~SLi~~~~~~~~~~~~~~~~~gi~ 387 (415)
T 2fq6_A 308 HPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFS 387 (415)
T ss_dssp CTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCC
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCCCCCCCCCHHHCCCC
T ss_conf 77767886699998615799874478994368999999999728906586677887666407844354457923765999
Q ss_pred CCEEEEEECCH--HH-HHHHHHHHHH
Q ss_conf 87478874798--99-9999999999
Q T0636 309 HHHIRISIGRE--ED-NDRLLAALAE 331 (336)
Q Consensus 309 ~~~iRis~~~~--ee-~~~l~~aL~~ 331 (336)
++.||+|+|.+ ++ .+.|.+||++
T Consensus 388 ~~liRlSVGlEd~~DLi~DL~~AL~~ 413 (415)
T 2fq6_A 388 GTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp SCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 69799985429999999999999996
No 137
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis H37RV}
Probab=99.56 E-value=1e-12 Score=100.66 Aligned_cols=304 Identities=15% Similarity=0.136 Sum_probs=172.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHH----HCCCCC--CHHHHHHHHHHHHCCCHH-HEEEE-CCHHHHHHHHHHHHCCCC
Q ss_conf 3576548887689999999998750----058898--618999999998488854-38860-778899999999846992
Q T0636 20 LAFNENPEAVEPRVQAAIAAAAARI----NRYPFD--AEPRVMRKLAEHFSCPED-NLMLV-RGIDECFDRISAEFSSMR 91 (336)
Q Consensus 20 L~~Nenp~~p~~~v~~al~~~~~~~----~~Ypd~--~~~~Lr~aia~~~~v~~d-~I~~t-~Gs~~~i~~~~~~~~~~~ 91 (336)
.+|+--|-+.||.|++++...-..+ +|=|+- -..+.++.+++.++++.+ .|+++ .|++.++..+...+.+++
T Consensus 42 ~nF~~GPs~~p~~Vl~a~~~~~~~~~eisHRs~ef~~i~~~~~~~L~~l~~~p~~y~v~~~~GsgT~~~ea~~~nl~~~k 121 (398)
T 2fyf_A 42 GRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR 121 (398)
T ss_dssp CBCCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCC
T ss_conf 99689985889999999864276534577788799999999999999996899986799978808999999997404777
Q ss_pred EEECCCCCHHHH--HHHHHHCCCE--EEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC-CC
Q ss_conf 576388735699--9999818803--641554356778899973000243133036633222223799999997378-72
Q T0636 92 FVTAWPGFDGYR--ARIAVSGLRH--FEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAG-KL 166 (336)
Q Consensus 92 vii~~P~y~~y~--~~~~~~g~~~--~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~-~~ 166 (336)
+++..-++.+.+ ..++.++... ...+.+...... .....+.+.++++.-.+-||...+.+++ ++..+ ++
T Consensus 122 ~l~~~~G~fg~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~h~eTstGv~~~~~~i---~~~~~~l~ 195 (398)
T 2fyf_A 122 SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPE---PQTDPSVDVIAWAHNETSTGVAVAVRRP---EGSDDALV 195 (398)
T ss_dssp EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCC---CCCCTTCSEEEEESEETTTTEECCCCCC---TTCC-CEE
T ss_pred CEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC---CCCCCCCCEEEEEEECCCCCEEEEECCC---CCCCCCEE
T ss_conf 45987246887899877750653045662257666656---2236666716999623876403320200---36788269
Q ss_pred CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCC-CCCCCEEECCCHHHHHHHHHCC----------------------
Q ss_conf 02521002588662003324520012023465233-4345313117889999997337----------------------
Q T0636 167 LIDETYVDYSSFRARGLAYGENELVFRSFSKSYGL-AGLRLGALFGPSELIAAMKRKQ---------------------- 223 (336)
Q Consensus 167 IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl-~GlRiG~~i~~~~~i~~l~~~~---------------------- 223 (336)
++|.+-. +.+..... ... ++ ++.|-.|.++. || +|+++.+++.++++....
T Consensus 196 vvD~~ss-~~~~~id~-~~i-dv-~~~ssqK~l~~ppG--l~~v~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (398)
T 2fyf_A 196 VIDATSG-AGGLPVDI-AET-DA-YYFAPQKNFASDGG--LWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKN 269 (398)
T ss_dssp EEECTTT-TTTSCCCG-GGC-SE-EEECTTSTTCSCSS--EEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTT
T ss_pred EEECCCC-CCCCCCCC-CCE-EE-EEEECCCCCCCCCC--EEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC
T ss_conf 9842422-46755560-016-88-99751223546897--4999987899965440278877775101235676630237
Q ss_pred C-CCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCC-EEECC------CCCE-EEE-ECCCHHHHH
Q ss_conf 8-77877778999999974---5999999999999999999999985897-86169------8647-886-569889999
Q T0636 224 W-FCNVGTLDLHALEAALD---NDRAREAHIAKTLAQRRRVADALRGLGY-RVASS------EANF-VLV-ENAAGERTL 290 (336)
Q Consensus 224 ~-~~~~~~~~~~aa~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~~lg~-~~~~s------~~~F-i~~-~~~~~~~~~ 290 (336)
. +.+.+.....+...++. ...-++...++.....+++.+.+++.|+ ..++. .++. +.+ +..+.+++.
T Consensus 270 ~~~~Tp~~~~~~~~~~~l~~~~~~gg~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~rS~~v~~~~~p~~~~~~~~~ 349 (398)
T 2fyf_A 270 QTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVA 349 (398)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSCHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCCCHHHHH
T ss_conf 74788727899999999999987034379999999999999999986798324779987739718999768846999999
Q ss_pred HHHHHCCCEEEECCCCCCCCEEEEEE-C--CHHHHHHHHHHHHHHHHC
Q ss_conf 99987693896077888887478874-7--989999999999999842
Q T0636 291 RFLRERGIQVKDAGQFGLHHHIRISI-G--REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 291 ~~L~~~gi~vr~~~~fg~~~~iRis~-~--~~ee~~~l~~aL~~~~e~ 335 (336)
+.|.++||.++.|...-....+|+|. + +.+++++|+++|+.+.|+
T Consensus 350 ~~l~~~gi~~~~Gh~~l~~~~~Ris~~~~v~~edv~~Li~~le~~~~~ 397 (398)
T 2fyf_A 350 KILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp HHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEECCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 999978887602841028986999758989999999999999999973
No 138
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.55 E-value=7e-12 Score=95.23 Aligned_cols=294 Identities=14% Similarity=0.144 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-----------CCCCEEECCCC
Q ss_conf 89999999998750058898-6189999999984888543886077889999999984-----------69925763887
Q T0636 31 PRVQAAIAAAAARINRYPFD-AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-----------SSMRFVTAWPG 98 (336)
Q Consensus 31 ~~v~~al~~~~~~~~~Ypd~-~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-----------~~~~vii~~P~ 98 (336)
+.=++++.+.+.. ..+... .-.++.+.+|+|+|+ ...+.++.++.|+++++.++ +||+|+++.=|
T Consensus 43 ~~e~~~v~~~l~s-g~~~~G~~v~~fE~~~a~~~g~--k~~v~~~sgT~Al~lal~al~~~~~~~~gl~~gdeVi~p~~t 119 (437)
T 3bb8_A 43 TKELQLMVEASLD-GWLTTGRFNDAFEKKLGEYLGV--PYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAG 119 (437)
T ss_dssp HHHHHHHHHHHHH-CCCBSCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSS
T ss_pred HHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC
T ss_conf 9999999999975-9875798799999999999798--929995788999999999742121000367998999983974
Q ss_pred CHHHHHHHHHHCCCEEEECCCC-CCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC-CCCCCC
Q ss_conf 3569999998188036415543-567788999730--002431330366332222237999999973787202-521002
Q T0636 99 FDGYRARIAVSGLRHFEIGLTD-DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLI-DETYVD 174 (336)
Q Consensus 99 y~~y~~~~~~~g~~~~~vp~~~-~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~Iv-DeaY~~ 174 (336)
|..-...+...|..++.+..+. .|.+|++.+++. .++++|++. +--|...+.++|.++++++++.|| |.|..-
T Consensus 120 ~~at~~ai~~~G~~pvfvDid~~t~~~d~~~l~~~it~~tkaIi~v---h~~G~~~d~~~i~~i~~~~~i~vIED~A~a~ 196 (437)
T 3bb8_A 120 FPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIA---HTLGNLFDLAEVRRVADKYNLWLIEDCCDAL 196 (437)
T ss_dssp CHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEE---CGGGCCCCHHHHHHHHHHHTCEEEEECTTCT
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEE---CCCCCCCCHHHHHHHHHHCCCEEEECCHHHH
T ss_conf 7999999998599899970566632010999998723698389984---3777766608899999985974880331430
Q ss_pred CCCCCCCHHHHCCCHHHHHHHH--HHHCCCCCCCEEECC-CHHHHHHHHHCCCC--------------------------
Q ss_conf 5886620033245200120234--652334345313117-88999999733787--------------------------
Q T0636 175 YSSFRARGLAYGENELVFRSFS--KSYGLAGLRLGALFG-PSELIAAMKRKQWF-------------------------- 225 (336)
Q Consensus 175 f~~~~~~~l~~~~n~iv~~S~S--K~~gl~GlRiG~~i~-~~~~i~~l~~~~~~-------------------------- 225 (336)
.+...-..+..+.+ +-+.||. |.+...+ =|.++. ++++.+.++..+..
T Consensus 197 ga~~~g~~~G~~gd-~~~fSF~~~K~ittge--GG~i~tnd~~l~~~~~~lr~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (437)
T 3bb8_A 197 GSTYDGKMAGTFGD-IGTVSFYPAKHITMGE--GGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLP 273 (437)
T ss_dssp TCEETTEETTSSSS-EEEEECSTTSSSCCSS--CEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCC
T ss_pred CCEECCEECCCCCC-EEEEECCCCCCCCCCC--CCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77069986136766-3579676774245688--75464389999999999998483533332222200011233444333
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECC--CC---C---E-EE
Q ss_conf ---------------7877778999999974599999999999999999999998589-786169--86---4---7-88
Q T0636 226 ---------------CNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLG-YRVASS--EA---N---F-VL 280 (336)
Q Consensus 226 ---------------~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg-~~~~~s--~~---~---F-i~ 280 (336)
+.++-+....+...|+.-+ +.+++-++..+++.+.|..+. ....|. .. + | +.
T Consensus 274 ~~~~~ky~~~~~G~n~rmsei~Aaigl~QL~rl~---~~~~~Rr~~~~~y~~~l~~~~~~~~l~~~~~~~~~~~~~f~i~ 350 (437)
T 3bb8_A 274 FGYDHKYTYSHLGYNLKITDMQAACGLAQLERIE---EFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPIT 350 (437)
T ss_dssp TTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEE
T ss_pred CCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHH---HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEE
T ss_conf 6886226897438520476999975805664203---8999999999999998337888478256688986452478999
Q ss_pred EECC---CHHHHHHHHHHCCCEEEECCCCC-----------------CC-------CEEEEEE---CCHHHHHHHHHHHH
Q ss_conf 6569---88999999987693896077888-----------------88-------7478874---79899999999999
Q T0636 281 VENA---AGERTLRFLRERGIQVKDAGQFG-----------------LH-------HHIRISI---GREEDNDRLLAALA 330 (336)
Q Consensus 281 ~~~~---~~~~~~~~L~~~gi~vr~~~~fg-----------------~~-------~~iRis~---~~~ee~~~l~~aL~ 330 (336)
++.. +-+.+.++|.++||-+++..... ++ +.+.+-+ -+.+|+++.+++|+
T Consensus 351 l~~~~~~~Rd~l~~~L~~~gI~t~~~y~~~l~~~p~~~~~~~~~~~~lpna~~i~~~~l~LP~~~~Lt~~di~~Iv~~ik 430 (437)
T 3bb8_A 351 LKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFE 430 (437)
T ss_dssp ECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCCHHHHHCCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 83566011999999999779974552587133188888569887688989999983949863899999999999999999
Q ss_pred HHHHCC
Q ss_conf 998429
Q T0636 331 EYSDHS 336 (336)
Q Consensus 331 ~~~e~~ 336 (336)
+|...+
T Consensus 431 ~f~~~n 436 (437)
T 3bb8_A 431 EFFGLN 436 (437)
T ss_dssp HHTTTT
T ss_pred HHHCCC
T ss_conf 996607
No 139
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.55 E-value=1.6e-11 Score=92.83 Aligned_cols=267 Identities=16% Similarity=0.186 Sum_probs=162.3
Q ss_pred HHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHH----HHHHHCCCEEEECCCCCCCCCHH
Q ss_conf 9999999984888543886077889999999984--69925763887356999----99981880364155435677889
Q T0636 54 RVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA----RIAVSGLRHFEIGLTDDLLLDPN 127 (336)
Q Consensus 54 ~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~----~~~~~g~~~~~vp~~~~~~~d~~ 127 (336)
.|.+.+|...|- +..++++.++.||...+.++ +||+|++..+.|.+-.. .++.+|+++..++.. |++
T Consensus 2 aLE~~la~Leg~--~~a~~~sSGmaAi~~~l~~ll~~Gd~vv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~~-----d~~ 74 (331)
T 1pff_A 2 ALEGKIAKLEHA--EACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMA-----VPG 74 (331)
T ss_dssp HHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STT
T ss_pred HHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCC-----CHH
T ss_conf 789999998599--8699966789999999999729999999928980169999999987648689995568-----979
Q ss_pred HHHH--HCCHHHHHHHCCCCCCCCCCCHHHHHHHHH-HCC-CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCC-C
Q ss_conf 9973--000243133036633222223799999997-378-7202521002588662003324520012023465233-4
Q T0636 128 DLAQ--VSRDDCVVLANPSNPTGQALSAGELDQLRQ-RAG-KLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGL-A 202 (336)
Q Consensus 128 ~l~~--~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~-~~~-~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl-~ 202 (336)
.+++ ..+++++|+-+|.||+-.+.+.+.+.+++. .++ .+|||..++.+.. ..++...- -||+.|.||.++- .
T Consensus 75 ~~~~~i~~~t~~i~~Es~~np~l~v~dl~~~~~~~a~~~~~~~vvDnT~atp~~--~~Pl~~Ga-Divv~S~TKy~~Gh~ 151 (331)
T 1pff_A 75 NIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPIL--TNPLDLGV-DIVVHSATKYINGHT 151 (331)
T ss_dssp HHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHH--CCGGGGTC-SEEEEETTTTTSSSS
T ss_pred HHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECEEECCCC--CCCCCCCC-CEEEEECCEEECCCC
T ss_conf 999986138718984267787763121466666654037848998574987531--46652478-779860435644898
Q ss_pred CCCCEEECCCHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-EE-ECC---
Q ss_conf 34531311788999999733--7877877778999999974599999999999999999999998589-7-86-169---
Q T0636 203 GLRLGALFGPSELIAAMKRK--QWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLG-Y-RV-ASS--- 274 (336)
Q Consensus 203 GlRiG~~i~~~~~i~~l~~~--~~~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg-~-~~-~~s--- 274 (336)
..=.|.++++.+.....+.. +...+ +.++..-+...++.-+-+..+.++..++...+.+.|++.. + +| ||+
T Consensus 152 d~~~G~v~~~~~~~~~~~~~~~~~~~G-~~l~p~da~ll~rgl~Tl~~Rm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s 230 (331)
T 1pff_A 152 DVVAGLVCSRADIIAKVKSQGIKDITG-AIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPD 230 (331)
T ss_dssp SCCCEEEEECHHHHHHHHHTCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
T ss_conf 776774333305689998642010368-8689899999974552888999999999999999787589843411688778
Q ss_pred -------------CCCEEEEECCCHHHHHHHHHHCCCEE------------E-EC--CC----------CCC-CCEEEEE
Q ss_conf -------------86478865698899999998769389------------6-07--78----------888-8747887
Q T0636 275 -------------EANFVLVENAAGERTLRFLRERGIQV------------K-DA--GQ----------FGL-HHHIRIS 315 (336)
Q Consensus 275 -------------~~~Fi~~~~~~~~~~~~~L~~~gi~v------------r-~~--~~----------fg~-~~~iRis 315 (336)
.|..+-+.+.+.+...+++..-.++- - |. .. .|. ++.||+|
T Consensus 231 ~p~~~~~~~~~~~~g~~~sf~l~~~~~a~~f~d~l~l~~~~~SlG~~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~lvRlS 310 (331)
T 1pff_A 231 HPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLS 310 (331)
T ss_dssp STTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEE
T ss_pred CHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEE
T ss_conf 50789987413687604789848899999999837822451367877514657630153229999999669892969999
Q ss_pred ECC--HHH-HHHHHHHHHH
Q ss_conf 479--899-9999999999
Q T0636 316 IGR--EED-NDRLLAALAE 331 (336)
Q Consensus 316 ~~~--~ee-~~~l~~aL~~ 331 (336)
+|. ++| .+.|.+||+.
T Consensus 311 vGlE~~~DLi~Dl~~AL~~ 329 (331)
T 1pff_A 311 VGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp CCSSCHHHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHHHHHH
T ss_conf 7018999999999999997
No 140
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.54 E-value=1.4e-11 Score=93.23 Aligned_cols=314 Identities=16% Similarity=0.147 Sum_probs=181.2
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 66553573576--54888-7689999999998750058-----8986189999999984888543886077889999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRY-----PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Y-----pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
.+++.||+.++ -+.+| -.|.+++|+.+.+..+... +.+...+|.+.+.+...-.-+.+..+++++|+....+
T Consensus 41 dG~~ylD~~~g~g~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sGseA~e~A~ 120 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAM 120 (429)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHH
T ss_conf 97999987627987751589799999999999755675467767668899999986420467613663145541013445
Q ss_pred HHH---------CCCCEEECCCCCHHHHHHH-HHHC-------------CCEEEECCC---CC---CCCCHHHHHHH---
Q ss_conf 984---------6992576388735699999-9818-------------803641554---35---67788999730---
Q T0636 85 AEF---------SSMRFVTAWPGFDGYRARI-AVSG-------------LRHFEIGLT---DD---LLLDPNDLAQV--- 132 (336)
Q Consensus 85 ~~~---------~~~~vii~~P~y~~y~~~~-~~~g-------------~~~~~vp~~---~~---~~~d~~~l~~~--- 132 (336)
... ....++....+|-+....+ ...+ ......|.. .. ...+.+.+++.
T Consensus 121 k~ar~~~~~kg~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 200 (429)
T 1s0a_A 121 KMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAA 200 (429)
T ss_dssp HHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHH
T ss_pred HHHHHEEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 55431000024677679999787636651333305885233455554333442235763222210256788988889986
Q ss_pred CCHH-HHHHHCC--CCCCCCCC-CH---HHHHHHHHHCCCC-CCCCCCCCCCCCCCC----HHHHCCCHHHHHHHHHHHC
Q ss_conf 0024-3133036--63322222-37---9999999737872-025210025886620----0332452001202346523
Q T0636 133 SRDD-CVVLANP--SNPTGQAL-SA---GELDQLRQRAGKL-LIDETYVDYSSFRAR----GLAYGENELVFRSFSKSYG 200 (336)
Q Consensus 133 ~~~~-~i~l~nP--nNPTG~~~-~~---~~l~~l~~~~~~~-IvDeaY~~f~~~~~~----~l~~~~n~iv~~S~SK~~g 200 (336)
...+ +.++.-| .+--|... ++ +.|.+++++++.+ |+||++..|+..-.. .....|+++ ++||..+
T Consensus 201 ~~~~iaavivEPv~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~~~~~v~PDiv---~~gK~l~ 277 (429)
T 1s0a_A 201 HRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL---CLGKALT 277 (429)
T ss_dssp HTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG
T ss_pred CCCCCCEEEEECEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECEEECCCCCCCCCCCCCEEECCCCE---ECCCCCC
T ss_conf 5886221576120227787678998999999999998097887201111355022235442204346400---0013332
Q ss_pred CCCCCCEEECCCHHHHHHHHHCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CC-
Q ss_conf 34345313117889999997337-------87787777899999997459999999999999999999999858---97-
Q T0636 201 LAGLRLGALFGPSELIAAMKRKQ-------WFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL---GY- 269 (336)
Q Consensus 201 l~GlRiG~~i~~~~~i~~l~~~~-------~~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l---g~- 269 (336)
-.+.-+|.+++.+++.+.+.... .+|+-|.++..++.+.|+.-+ -++......+.-.++.+.|+++ .+
T Consensus 278 gG~~p~~~~~~~~~i~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~L~~l~-~~~~~~~~~~~g~~l~~~L~~l~~~~~v 356 (429)
T 1s0a_A 278 GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILE-SGDWQQQVADIEVQLREQLAPARDAEMV 356 (429)
T ss_dssp TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHGGGGGCTTE
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 100023211457999852378887633306877888755355310253211-3465312568999999999985469966
Q ss_pred EEECCCCCEEEEECC---CHHHHHHHHHHCCCEEEECCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHHHC
Q ss_conf 861698647886569---8899999998769389607788888747887---47989999999999999842
Q T0636 270 RVASSEANFVLVENA---AGERTLRFLRERGIQVKDAGQFGLHHHIRIS---IGREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 270 ~~~~s~~~Fi~~~~~---~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis---~~~~ee~~~l~~aL~~~~e~ 335 (336)
.-....|.+.-+++. ....+.+.+.++||+++++. +.||++ +-|++|+++++++|++.+++
T Consensus 357 ~~vrg~Gl~~~i~~~~~~~~~~l~~~~~~~Gll~~~~g-----n~i~l~Ppl~it~~eid~~i~~l~~al~e 423 (429)
T 1s0a_A 357 ADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFG-----KLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp EEEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCBT-----TEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred EEEEECCCEEEEEECCCCCHHHHHHHHHHCCCEEEECC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 77721262899991584659999999997897798549-----99999288478899999999999999976
No 141
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomics, joint center for structural genomics, JCSG; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.54 E-value=1.6e-11 Score=92.91 Aligned_cols=278 Identities=13% Similarity=0.137 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-CCCCEEECCC-CCHHH-HHHHHHH--CCCEEEECCCCC------
Q ss_conf 89999999984888543886077889999999984-6992576388-73569-9999981--880364155435------
Q T0636 53 PRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-SSMRFVTAWP-GFDGY-RARIAVS--GLRHFEIGLTDD------ 121 (336)
Q Consensus 53 ~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-~~~~vii~~P-~y~~y-~~~~~~~--g~~~~~vp~~~~------ 121 (336)
.++++.|.+.++.+ +.++++.|++.++..++..+ ++|++++..= .|+.- ...++.. +..+..++.+..
T Consensus 38 ~~~~~~L~~l~~t~-~~v~~~gsgT~a~ea~~~~l~~~d~~lv~~~G~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (379)
T 3ke3_A 38 NDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAP 116 (379)
T ss_dssp HHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSC
T ss_pred HHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
T ss_conf 99999999997899-77999687799999999971889857996677188999999997188861699702443224556
Q ss_pred --C-CCCHHHHHHH---CCHHHHHHHCCCCCCCCCCCHHHHHHHHH---HCCCCCCCCCCCCCCCCCCCHHHHCCCHHHH
Q ss_conf --6-7788999730---00243133036633222223799999997---3787202521002588662003324520012
Q T0636 122 --L-LLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQ---RAGKLLIDETYVDYSSFRARGLAYGENELVF 192 (336)
Q Consensus 122 --~-~~d~~~l~~~---~~~~~i~l~nPnNPTG~~~~~~~l~~l~~---~~~~~IvDeaY~~f~~~~~~~l~~~~n~iv~ 192 (336)
+ ..|++++.+. .++++++++.-++-||...+.+++.++++ .++.+++|.+.. .+......-.+.-+.+ +
T Consensus 117 ~~~~~~~~e~~~~~~~~~~~~~v~~~h~etstG~~~~~~~i~~~~~~~~~~~~~~v~~~~s-~g~~~~~~d~~~iD~~-~ 194 (379)
T 3ke3_A 117 KPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIA-SGCVWLDMKELGIDVL-I 194 (379)
T ss_dssp CCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTT-CTTCCCCHHHHTCSEE-E
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC-CCCCCCCHHHCCCEEE-E
T ss_conf 7788553899998623258608998321025540012444321001124556347873114-5533323100486499-9
Q ss_pred HHHHHHH-CCCCCCCEEECCCHHHHHHHHHCCCC-C-----------------------CCCHHHHHHHHHHHHH--HHH
Q ss_conf 0234652-33434531311788999999733787-7-----------------------8777789999999745--999
Q T0636 193 RSFSKSY-GLAGLRLGALFGPSELIAAMKRKQWF-C-----------------------NVGTLDLHALEAALDN--DRA 245 (336)
Q Consensus 193 ~S~SK~~-gl~GlRiG~~i~~~~~i~~l~~~~~~-~-----------------------~~~~~~~~aa~~~l~~--~~~ 245 (336)
.|--|.+ |.|| +|+++.+++.++.+...... + +.+.....+...+++. ..-
T Consensus 195 ~ssqK~l~gp~G--lg~~~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tp~~~~~~al~~~l~~~~~~g 272 (379)
T 3ke3_A 195 SAPQKGWSSTPC--AGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIG 272 (379)
T ss_dssp ECTTTTTCSCCC--EEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCCCCCC--EEEECCCHHHHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 826786438998--501004499996222569996402202013333310366533553056899999999898765434
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEECCC---C-CEEEEECCCHHH-HHHHHHHCCCEEEECCCC--C---CCCEEEEE
Q ss_conf 999999999999999999985897861698---6-478865698899-999998769389607788--8---88747887
Q T0636 246 REAHIAKTLAQRRRVADALRGLGYRVASSE---A-NFVLVENAAGER-TLRFLRERGIQVKDAGQF--G---LHHHIRIS 315 (336)
Q Consensus 246 ~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~---~-~Fi~~~~~~~~~-~~~~L~~~gi~vr~~~~f--g---~~~~iRis 315 (336)
++...++.....+++.+.+...++..+... . ..+.+..+++.. ....|.++||.++.|... | ..+.+|||
T Consensus 273 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~g~~~~~~~~RI~ 352 (379)
T 3ke3_A 273 FDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTERDDMHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLG 352 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSCHHHHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEE
T ss_conf 56668999998766542110134430348154097599980898879999999977979970765357866789999996
Q ss_pred E-C--CHHHHHHHHHHHHHHHHC
Q ss_conf 4-7--989999999999999842
Q T0636 316 I-G--REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 316 ~-~--~~ee~~~l~~aL~~~~e~ 335 (336)
. | +.+|+++++++|++.+++
T Consensus 353 ~~g~~t~~di~~~l~al~~~L~e 375 (379)
T 3ke3_A 353 LFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp CCSHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 76779999999999999999999
No 142
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics, NPPSFA; HET: PLP; 1.15A {Thermus thermophilus HB8}
Probab=99.53 E-value=1.6e-11 Score=92.98 Aligned_cols=322 Identities=17% Similarity=0.210 Sum_probs=202.5
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH--HHCCCC----CC--HHHHHHHH-----HHHHCCCHHH
Q ss_conf 11578975036655357357654888768999999999875--005889----86--18999999-----9984888543
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPF----DA--EPRVMRKL-----AEHFSCPEDN 69 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~--~~~Ypd----~~--~~~Lr~ai-----a~~~~v~~d~ 69 (336)
|.+.++++.+.-.+-|.|--.||- +||.|++++...+.. ...||. .| +..-.|.+ .+.++..--+
T Consensus 11 i~~~i~~e~~rq~~~l~LiaSEN~--~S~~v~~al~S~l~nkYaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a~~an 88 (407)
T 2dkj_A 11 LFELIALEEKRQREGLELIASENF--VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWAN 88 (407)
T ss_dssp HHHHHHHHHHHHHTSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCCC--CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEC
T ss_conf 999999999999779158706665--899999986170015376889985555666269999999999999971997333
Q ss_pred EEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHH-----HHHHHCCCEEEECCCCC-CCCCHHHHHHH---CCHHHH
Q ss_conf 886077889999999984--69925763887356999-----99981880364155435-67788999730---002431
Q T0636 70 LMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA-----RIAVSGLRHFEIGLTDD-LLLDPNDLAQV---SRDDCV 138 (336)
Q Consensus 70 I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~-----~~~~~g~~~~~vp~~~~-~~~d~~~l~~~---~~~~~i 138 (336)
|-..+|++..+. ++.++ +||+|+..++.-.++.. .......+.+.++.+.+ +.+|.+++++. .++|+|
T Consensus 89 Vqp~SGs~An~a-v~~all~pgd~il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~~~~~~~IDyd~~~~~a~~~kPklI 167 (407)
T 2dkj_A 89 VQPHSGSQANMA-VYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVI 167 (407)
T ss_dssp CCCSSHHHHHHH-HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEE
T ss_pred CCCCCCHHHHHH-HHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEE
T ss_conf 463233179999-9999738998787415667776444666665541542124366666774489999999986399989
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCC-CC--CCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCC-H
Q ss_conf 330366332222237999999973787-20252100-25--8866200332452001202346523343453131178-8
Q T0636 139 VLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DY--SSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGP-S 213 (336)
Q Consensus 139 ~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~-~f--~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~-~ 213 (336)
++.-=+.| ..++-+++.++++..+. +++|-+.. .+ ++....++... + ||..|.-|+| +|=|-|.+..+ +
T Consensus 168 i~G~S~y~--~~~d~~~~reiad~vga~l~~D~sH~~GLIa~g~~~~Pl~~a-D-vvt~sTHKTl--rGPrggiI~~~~~ 241 (407)
T 2dkj_A 168 VAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYA-H-VVTSTTHKTL--RGPRGGLILSNDP 241 (407)
T ss_dssp EECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTC-S-EEEEESSGGG--CCCSCEEEEESCH
T ss_pred EECCCCCC--CCCCHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCCCCC-C-EEEEECCCCC--CCCCCCCEEECCH
T ss_conf 82554565--555789999876311857871223244442045368855555-2-4885334335--6887650131547
Q ss_pred HHHHHHHHCCCCCCCCH--HHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC--CCCCEEEEECC--
Q ss_conf 99999973378778777--78999999-9745--9999999999999999999999858978616--98647886569--
Q T0636 214 ELIAAMKRKQWFCNVGT--LDLHALEA-ALDN--DRAREAHIAKTLAQRRRVADALRGLGYRVAS--SEANFVLVENA-- 284 (336)
Q Consensus 214 ~~i~~l~~~~~~~~~~~--~~~~aa~~-~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~--s~~~Fi~~~~~-- 284 (336)
++.+++.+..-|...+. +.+.++.+ ++.. ...+.++.+++..+.+.|.+.|.+.|+++.. ++...+|+++.
T Consensus 242 ~~~~kI~~avfPg~qggp~~~~iAa~aval~Ea~~~~fk~Ya~qVv~NA~~La~~L~~~G~~vv~ggTdnH~vlvdl~~~ 321 (407)
T 2dkj_A 242 ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPK 321 (407)
T ss_dssp HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGG
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEECCCCC
T ss_conf 89999998618634678527788999987888528789999999999998271278628974135888776365214456
Q ss_pred --CHHHHHHHHHHCCCEEE----ECCC-CC-CCCEEEEEEC-------CHHHHHHHHHHHHHHH
Q ss_conf --88999999987693896----0778-88-8874788747-------9899999999999998
Q T0636 285 --AGERTLRFLRERGIQVK----DAGQ-FG-LHHHIRISIG-------REEDNDRLLAALAEYS 333 (336)
Q Consensus 285 --~~~~~~~~L~~~gi~vr----~~~~-fg-~~~~iRis~~-------~~ee~~~l~~aL~~~~ 333 (336)
++..+.+.|.+.||.+. |+.. .+ .+..|||... .++||+.+.+.+.+..
T Consensus 322 g~~g~~a~~~Le~agI~vNkn~iP~d~~~~~~~sGiRiGT~a~TtrG~~e~dm~~ia~~i~~~l 385 (407)
T 2dkj_A 322 GLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385 (407)
T ss_dssp TCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 7519999999998093873574889999998897406477899857998899999999999999
No 143
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA; HET: PLP; 1.90A {Sulfolobus tokodaii str}
Probab=99.53 E-value=3.3e-11 Score=90.84 Aligned_cols=312 Identities=15% Similarity=0.136 Sum_probs=180.5
Q ss_pred CCCCCEECCCC--CCCCCC--CHHHHHHHHHHHHHHHC-----CCCCCHHHHHHHHHHHHCCC-HHHEEEECCHHHHHHH
Q ss_conf 66553573576--548887--68999999999875005-----88986189999999984888-5438860778899999
Q T0636 13 AAAQAVCLAFN--ENPEAV--EPRVQAAIAAAAARINR-----YPFDAEPRVMRKLAEHFSCP-EDNLMLVRGIDECFDR 82 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~p--~~~v~~al~~~~~~~~~-----Ypd~~~~~Lr~aia~~~~v~-~d~I~~t~Gs~~~i~~ 82 (336)
.+++.||+.++ -+.+|- -|.+.+|+.+.+.++.. |+.+...+|-+.+.+...-+ .+.+..+++++++...
T Consensus 40 dG~~ylD~~~g~g~~~lGh~~hP~v~~a~~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sgsea~~~ 119 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEA 119 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH
T ss_pred CCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHH
T ss_conf 97999986611898854887889999999999975256465643687999999998864787644079961784899999
Q ss_pred HHHHH---CCCCEEECCCCCHHHHH-HHHHHCC-------------CEEEECCCCC--------CCCCHHHHHH------
Q ss_conf 99984---69925763887356999-9998188-------------0364155435--------6778899973------
Q T0636 83 ISAEF---SSMRFVTAWPGFDGYRA-RIAVSGL-------------RHFEIGLTDD--------LLLDPNDLAQ------ 131 (336)
Q Consensus 83 ~~~~~---~~~~vii~~P~y~~y~~-~~~~~g~-------------~~~~vp~~~~--------~~~d~~~l~~------ 131 (336)
+...- ....++...-+|-+... .....|. .+..+|.... ...+.++...
T Consensus 120 a~k~a~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
T 2eo5_A 120 SIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFI 199 (419)
T ss_dssp HHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99975541466228886764686520344317963344567899999745678872000234566566676555677766
Q ss_pred --------HCCHH-HHHHHCCCCC-CCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCC----CHHHHCCCHHHH
Q ss_conf --------00024-3133036633-222223----79999999737872-02521002588662----003324520012
Q T0636 132 --------VSRDD-CVVLANPSNP-TGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRA----RGLAYGENELVF 192 (336)
Q Consensus 132 --------~~~~~-~i~l~nPnNP-TG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~----~~l~~~~n~iv~ 192 (336)
....+ +.++.-|=.- .|.... .+.|.+++++++.+ |+||++..|+..-. ......|+++
T Consensus 200 ~~~~~~~~~~~~~iaavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDiv-- 277 (419)
T 2eo5_A 200 EDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI-- 277 (419)
T ss_dssp HHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCE--
T ss_conf 778988633788656999788637888751899999999999998498886246654687666776201567542310--
Q ss_pred HHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 02346523343453131178899999973378778777789999999745999999999999999999999985897861
Q T0636 193 RSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVA 272 (336)
Q Consensus 193 ~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~ 272 (336)
+++|..+-.+.-+|.++..+++...-.....+|+-|.++..++.+.|+-- +....+....-+++.+.|+++.-.+
T Consensus 278 -~~gK~l~~g~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i---e~~~~~~~~~g~~l~~~L~~l~~~v- 352 (419)
T 2eo5_A 278 -TLAKALGGGIMPIGATIFRKDLDFKPGMHSNTFGGNALACAIGSKVIDIV---KDLLPHVNEIGKIFAEELQGLADDV- 352 (419)
T ss_dssp -EECGGGGTTTSCCEEEEEEGGGCCC------CCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHTTSSSEE-
T ss_pred -ECCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHH-
T ss_conf -01333457766337898722314577665878899961057899999999---7122679999999999999877663-
Q ss_pred CCCCCEEEEECCC---HHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHHC
Q ss_conf 6986478865698---8999999987693896077888887478874---7989999999999999842
Q T0636 273 SSEANFVLVENAA---GERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 273 ~s~~~Fi~~~~~~---~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e~ 335 (336)
...|.++-+.+.+ +..+.+.+.++||+++++. ++.||++- -|++|+++++++|++..++
T Consensus 353 rg~Gl~~~i~~~~~~~~~~~~~~~~~~Gll~~~~g----~~~ir~~Ppl~it~~~id~~l~~l~~~l~~ 417 (419)
T 2eo5_A 353 RGIGLAWGLEYNEKKVRDRIIGESFKRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp EEETTEEEEECSCHHHHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 60036999995777889999999997897996469----998999799788999999999999999997
No 144
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.52 E-value=7.4e-11 Score=88.60 Aligned_cols=319 Identities=15% Similarity=0.098 Sum_probs=177.6
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHC----CCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHH
Q ss_conf 66553573576--54888-768999999999875005----889861899999999848885438860778899999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINR----YPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISA 85 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~----Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~ 85 (336)
.+++.||+.++ -..+| -.|.+.+|+++.+.++.. |+.+...+|-+.+.+...-..+.+..+++++|+...+++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~sGseA~e~Alk 120 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIR 120 (433)
T ss_dssp TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
T ss_conf 96999985528886631689899999999998634554454116899999997887478441314530465520899999
Q ss_pred H---HCCC-CEEECCCCCHHHHHHH-HHHCCC-----------EEEECCCCCCC---------CCHHH---HH----HHC
Q ss_conf 8---4699-2576388735699999-981880-----------36415543567---------78899---97----300
Q T0636 86 E---FSSM-RFVTAWPGFDGYRARI-AVSGLR-----------HFEIGLTDDLL---------LDPND---LA----QVS 133 (336)
Q Consensus 86 ~---~~~~-~vii~~P~y~~y~~~~-~~~g~~-----------~~~vp~~~~~~---------~d~~~---l~----~~~ 133 (336)
. +.+. .++...-+|-+....+ ...+.. ...++....+. ..... .. ...
T Consensus 121 lAr~~t~r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (433)
T 1zod_A 121 MAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQS 200 (433)
T ss_dssp HHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99984299622203433454100000346762102457865674122322344665333443114677889888877514
Q ss_pred CHH-HHHHHCCCC-CCCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCC----CHHHHCCCHHHHHHHHHHHCCC
Q ss_conf 024-313303663-3222223----79999999737872-02521002588662----0033245200120234652334
Q T0636 134 RDD-CVVLANPSN-PTGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRA----RGLAYGENELVFRSFSKSYGLA 202 (336)
Q Consensus 134 ~~~-~i~l~nPnN-PTG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~----~~l~~~~n~iv~~S~SK~~gl~ 202 (336)
..+ +.++.-|=. --|.... .+++.++|++++.+ |+||+...|+..-. ......|+++ +++|..| .
T Consensus 201 ~~~iaavi~EPi~g~gG~~~~~~~yl~~l~~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDi~---~~gK~l~-~ 276 (433)
T 1zod_A 201 SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL---TLSKTLG-A 276 (433)
T ss_dssp CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECHHHH-T
T ss_pred CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHH---CCCCCCC-C
T ss_conf 66544324443226788767999999999999976485798435112675666876555689887631---0344345-6
Q ss_pred CCCCEEECCCHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHH-HHHHHHHHHHHCCCEE-ECC
Q ss_conf 345313117889999997337----8778777789999999745--9999999999999-9999999998589786-169
Q T0636 203 GLRLGALFGPSELIAAMKRKQ----WFCNVGTLDLHALEAALDN--DRAREAHIAKTLA-QRRRVADALRGLGYRV-ASS 274 (336)
Q Consensus 203 GlRiG~~i~~~~~i~~l~~~~----~~~~~~~~~~~aa~~~l~~--~~~~~~~~~~~~~-~r~~l~~~l~~lg~~~-~~s 274 (336)
|+-+|.+++.+++++.+.... .+++-|.++..++.+.++- .+.+.+++++.-. -++.+.+.+++.++-. ..+
T Consensus 277 G~p~~av~~~~~~~~~~~~~~~~~~~T~~~~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrG 356 (433)
T 1zod_A 277 GLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRG 356 (433)
T ss_dssp TSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 65322045531022234543333467767774066787776576520035566777655688887666650897478872
Q ss_pred CCCEEEEEC---C--------CHHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHHC
Q ss_conf 864788656---9--------88999999987693896077888887478874---7989999999999999842
Q T0636 275 EANFVLVEN---A--------AGERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 275 ~~~Fi~~~~---~--------~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e~ 335 (336)
.|.++-+++ . .+..+.+.+.++|+..+.....+..+.||++- -+++|++.++++|++.+++
T Consensus 357 ~Glm~~ie~~~d~~~~~~~~~~~~~l~~~~~~~gl~~~~~~~~~~~~~i~~~PpL~it~~eid~~~~~l~~al~~ 431 (433)
T 1zod_A 357 RGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp ETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 141899999237765672389999999999984721070640689998999799788999999999999999998
No 145
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.52 E-value=3e-11 Score=91.14 Aligned_cols=306 Identities=14% Similarity=0.067 Sum_probs=178.0
Q ss_pred CCCHHHHHHHHHHHHHHHCC-CCC--CHH----HHHHHHHHHHCCCHH----H-EEEECCHHHHHHHHHHHH--------
Q ss_conf 87689999999998750058-898--618----999999998488854----3-886077889999999984--------
Q T0636 28 AVEPRVQAAIAAAAARINRY-PFD--AEP----RVMRKLAEHFSCPED----N-LMLVRGIDECFDRISAEF-------- 87 (336)
Q Consensus 28 ~p~~~v~~al~~~~~~~~~Y-pd~--~~~----~Lr~aia~~~~v~~d----~-I~~t~Gs~~~i~~~~~~~-------- 87 (336)
.++|.+-+.+..+++. |.. ++. +.. ++.+.+++.+|.+.+ . =.+|.|+++++.+.+.+.
T Consensus 67 ~~~~~a~~~~~~~~~~-n~~~~~~~p~~~~lE~~~~~~la~l~g~p~~~~~~~~G~~t~Ggs~a~l~a~~aar~~~~~~~ 145 (502)
T 3hbx_A 67 WMEPECDKLIMSSINK-NYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (502)
T ss_dssp CCCHHHHHHHHHTTTC-BTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8899999999998526-888842067799999999999999868894325797557745279999999999999999987
Q ss_pred -------CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCC-CCCCHHHHHHHC--CHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf -------6992576388735699999981880364155435-677889997300--024313303663322222379999
Q T0636 88 -------SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD-LLLDPNDLAQVS--RDDCVVLANPSNPTGQALSAGELD 157 (336)
Q Consensus 88 -------~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~~-~~~d~~~l~~~~--~~~~i~l~nPnNPTG~~~~~~~l~ 157 (336)
....+++++=.=.....+++++|++++.+|.+++ +.+|++++++.. ++.+++++.++|+||.+-+.++|.
T Consensus 146 ~~~g~~~~~~~i~~s~~aH~s~~kaa~~~Gi~~~~V~~~~~~~~~D~~~L~~~i~~~t~~v~~~~~tt~tg~~d~i~~I~ 225 (502)
T 3hbx_A 146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLN 225 (502)
T ss_dssp HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHH
T ss_pred HHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHH
T ss_conf 62278877847997588777999999972896189987898873189999998515872699864660775434399999
Q ss_pred HHHHHCC-------CCCCCCCCCCCC----CCCCCHHHHCCCHH-HHHHHHHHHCCCCCCCEEECC-CHHHHH-HHHHC-
Q ss_conf 9997378-------720252100258----86620033245200-120234652334345313117-889999-99733-
Q T0636 158 QLRQRAG-------KLLIDETYVDYS----SFRARGLAYGENEL-VFRSFSKSYGLAGLRLGALFG-PSELIA-AMKRK- 222 (336)
Q Consensus 158 ~l~~~~~-------~~IvDeaY~~f~----~~~~~~l~~~~n~i-v~~S~SK~~gl~GlRiG~~i~-~~~~i~-~l~~~- 222 (336)
+++++.+ ++-+|-+|..+. ..........+++- +.-+.-|..+ +..-+|++.. ++.... .+...
T Consensus 226 ~i~~~~~~~~~~d~~~HvDaA~~g~~~~~~~~~~~~~~~~~~~dSi~~~~HK~~~-~p~g~g~~~~r~~~~l~~~~~~~~ 304 (502)
T 3hbx_A 226 DLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHI 304 (502)
T ss_dssp HHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEE
T ss_pred HHHHHHCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCC-CCCCEEEEEEECHHHCCCCCCCCC
T ss_conf 9999957543553221241321353124460022443478887768646532268-887858999977566022233467
Q ss_pred ------CCCCCC----CHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECC-C-CCEEEEECC---
Q ss_conf ------787787----7778999999974--59999999999999999999999858-9786169-8-647886569---
Q T0636 223 ------QWFCNV----GTLDLHALEAALD--NDRAREAHIAKTLAQRRRVADALRGL-GYRVASS-E-ANFVLVENA--- 284 (336)
Q Consensus 223 ------~~~~~~----~~~~~~aa~~~l~--~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~s-~-~~Fi~~~~~--- 284 (336)
...+++ +......+...+. ..+-+++..++.....+++.+.|++. +++++.. . .+-+-++.+
T Consensus 305 ~y~~~~~~~~~~~~sr~~~~~~~~~~~l~~lG~~G~~~~~~~~~~~A~yl~~~L~~~~~~el~~~p~~~~iV~F~~~~~~ 384 (502)
T 3hbx_A 305 NYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSS 384 (502)
T ss_dssp CSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCS
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCC
T ss_conf 75678777635677775466999999999957599999999999999999999974899599827998408999747998
Q ss_pred --CHHHHHHHHHHCCCEEEECCCC--CC-CCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf --8899999998769389607788--88-874788747---989999999999999842
Q T0636 285 --AGERTLRFLRERGIQVKDAGQF--GL-HHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 --~~~~~~~~L~~~gi~vr~~~~f--g~-~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
+..++.+.|.++|+.+-....+ +. ...+|+.+. |++++++|++.|++..++
T Consensus 385 ~~~~~dia~~L~~~G~~~~~~~~pp~~~~~~~lrv~~~~~~t~~~id~fv~dl~~i~~e 443 (502)
T 3hbx_A 385 CHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRE 443 (502)
T ss_dssp SCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 87899999999985987415778986456357888821899999999999999999999
No 146
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4
Probab=99.52 E-value=2.8e-11 Score=91.31 Aligned_cols=306 Identities=12% Similarity=0.118 Sum_probs=171.9
Q ss_pred CCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCCCCC-C--HHH-HHHHHHHHHCCCHHHEEEECCHHHHHHHHHHH
Q ss_conf 6553573576--54888-7689999999998750058898-6--189-99999998488854388607788999999998
Q T0636 14 AAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRYPFD-A--EPR-VMRKLAEHFSCPEDNLMLVRGIDECFDRISAE 86 (336)
Q Consensus 14 ~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Ypd~-~--~~~-Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~ 86 (336)
+++.||+..+ -+.+| -.|.+.+|+.+.+.++...+.. . ..+ +.+.++...+ .+.+..+++++++....++.
T Consensus 64 G~~yiD~~~g~~~~~lGh~hp~v~~Ai~~q~~~~~~~~~~~~~~~~~~~e~ll~~~~~--~~~v~f~~sGseA~e~a~kl 141 (433)
T 1z7d_A 64 DKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANETAYKL 141 (433)
T ss_dssp CCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC--CCEEEEEECCCCHHHHHHHH
T ss_conf 8999984418886714059899999999999855875465540799999997645678--64157741124215679999
Q ss_pred HC------------CCCEEECCCCCHHHHHHHH-HHCC------------CEEEECCCCCCCCCHHHHHHHCCH-H-HHH
Q ss_conf 46------------9925763887356999999-8188------------036415543567788999730002-4-313
Q T0636 87 FS------------SMRFVTAWPGFDGYRARIA-VSGL------------RHFEIGLTDDLLLDPNDLAQVSRD-D-CVV 139 (336)
Q Consensus 87 ~~------------~~~vii~~P~y~~y~~~~~-~~g~------------~~~~vp~~~~~~~d~~~l~~~~~~-~-~i~ 139 (336)
.. ...++...-+|-+...... ..+. .+..+|. -|.+++++..+. + +.+
T Consensus 142 ar~~~~~~~~~~~~~~~i~~~~~~yhG~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~-----~d~~~le~~l~~~~iAav 216 (433)
T 1z7d_A 142 CRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDPNVCAF 216 (433)
T ss_dssp HHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTSTTEEEE
T ss_pred HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC-----CHHHHHHHHCCCCCEEEE
T ss_conf 988763234433333432467632688743110267885556688888873012377-----759999986489986999
Q ss_pred HHCC-CCCCCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCCC----HHHHCCCHHHHHHHHHHHCCCC-CCCEE
Q ss_conf 3036-633222223----79999999737872-025210025886620----0332452001202346523343-45313
Q T0636 140 LANP-SNPTGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRAR----GLAYGENELVFRSFSKSYGLAG-LRLGA 208 (336)
Q Consensus 140 l~nP-nNPTG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~~----~l~~~~n~iv~~S~SK~~gl~G-lRiG~ 208 (336)
+..| ..-.|...+ .+.|.++|++++.+ |+||+...|+..-.. .....|+++ +++|..+ .| +-+|.
T Consensus 217 i~EPv~g~~G~~~~~~~~l~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~e~~gv~PDiv---~~gK~l~-gG~~p~~a 292 (433)
T 1z7d_A 217 IVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI---LLGKALS-GGHYPISA 292 (433)
T ss_dssp EECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSCCEE
T ss_pred EEEEECCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCEE---EECCCCC-CCCCCCCC
T ss_conf 9975748889850999999999999988196899945765888523433254439998788---7310034-88776421
Q ss_pred ECCCHHHHHHHHHCC--CCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHH-HHHHHHHHHHHHCCCE-EECCCCCEEEEE
Q ss_conf 117889999997337--8778777789999999745--999999999999-9999999999858978-616986478865
Q T0636 209 LFGPSELIAAMKRKQ--WFCNVGTLDLHALEAALDN--DRAREAHIAKTL-AQRRRVADALRGLGYR-VASSEANFVLVE 282 (336)
Q Consensus 209 ~i~~~~~i~~l~~~~--~~~~~~~~~~~aa~~~l~~--~~~~~~~~~~~~-~~r~~l~~~l~~lg~~-~~~s~~~Fi~~~ 282 (336)
+++.+++.+.+.... .+|+-|.++..++.+.|+- .+.+.+++++.. .-++.|.+.+++.++. -....|.++-+.
T Consensus 293 v~~~~~i~~~~~~~~~~~Tf~g~pl~~aAa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~~~~~~~~v~~vrg~Glm~~i~ 372 (433)
T 1z7d_A 293 VLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIE 372 (433)
T ss_dssp EEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEE
T ss_pred CCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEE
T ss_conf 14519886157899867788989245577676655553112577766535899999999975699707986158089999
Q ss_pred CC----CHHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHH
Q ss_conf 69----88999999987693896077888887478874---798999999999999984
Q T0636 283 NA----AGERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYSD 334 (336)
Q Consensus 283 ~~----~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e 334 (336)
+. ...++...|.++||++++.. .+.||++- -|++|+++++++|++..+
T Consensus 373 f~~~~~~~~~~~~~l~~~Gll~~~~~----~~~ir~~Ppl~it~~did~~~~~l~~alk 427 (433)
T 1z7d_A 373 FKNELVNVLDICLKLKENGLITRDVH----DKTIRLTPPLCITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp ECTTTCCHHHHHHHHHHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHCCEEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 74886689999999996994893279----99899979847899999999999999999
No 147
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent enzyme, pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.51 E-value=3.4e-11 Score=90.82 Aligned_cols=311 Identities=12% Similarity=0.051 Sum_probs=181.5
Q ss_pred CCCCCEECCCCC--CCCC-CCHHHHHHHHHHHHHHHCC----CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHH
Q ss_conf 665535735765--4888-7689999999998750058----89861899999999848885438860778899999999
Q T0636 13 AAAQAVCLAFNE--NPEA-VEPRVQAAIAAAAARINRY----PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISA 85 (336)
Q Consensus 13 ~~~~~i~L~~Ne--np~~-p~~~v~~al~~~~~~~~~Y----pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~ 85 (336)
.+++.+|+.++- +.+| -.|.+.+|+.+.++.+..+ ..+...+|.+.+++..+. +.++.+++++|+....+.
T Consensus 74 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~f~~SGseA~e~Aik 151 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNY--HKVLPMNTGVEAGETACK 151 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC--CEEEEECCCCHHHHHHHH
T ss_conf 989999815789877545799999999999987511467543446999999999862587--769970673235689999
Q ss_pred HH------------CCCCEEECCCCCHHHHHHHH-HHCCCEEE---ECCCCC---C-CCCHHHHHHHCC-HH-HHHHHCC
Q ss_conf 84------------69925763887356999999-81880364---155435---6-778899973000-24-3133036
Q T0636 86 EF------------SSMRFVTAWPGFDGYRARIA-VSGLRHFE---IGLTDD---L-LLDPNDLAQVSR-DD-CVVLANP 143 (336)
Q Consensus 86 ~~------------~~~~vii~~P~y~~y~~~~~-~~g~~~~~---vp~~~~---~-~~d~~~l~~~~~-~~-~i~l~nP 143 (336)
.. ....++...-+|-+....+. ..+..... -|..++ + .-|++++++..+ .+ +.++.-|
T Consensus 152 lar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~s~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~iAavi~EP 231 (439)
T 2oat_A 152 LARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEP 231 (439)
T ss_dssp HHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECS
T ss_pred HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCEEEEEECC
T ss_conf 99988875078677750267436787877643444778865555778888880574477799999854899869999788
Q ss_pred CCC-CCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCCC----HHHHCCCHHHHHHHHHHHCCCC-CCCEEECCC
Q ss_conf 633-222223----79999999737872-025210025886620----0332452001202346523343-453131178
Q T0636 144 SNP-TGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRAR----GLAYGENELVFRSFSKSYGLAG-LRLGALFGP 212 (336)
Q Consensus 144 nNP-TG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~~----~l~~~~n~iv~~S~SK~~gl~G-lRiG~~i~~ 212 (336)
=.= .|.+.+ .++++++|++++.+ |+||+...|+..-.. .....|+++ +|+|.+| .| +-+|.+++.
T Consensus 232 iqg~gG~~~p~~~fl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gv~PDiv---t~gK~l~-~G~~p~~av~~~ 307 (439)
T 2oat_A 232 IQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV---LLGKALS-GGLYPVSAVLCD 307 (439)
T ss_dssp SBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSCCEEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEE---EECCHHH-CCCCCCEEEECH
T ss_conf 328889843999999999999986383798335330668558851577649999999---9686656-898452135301
Q ss_pred HHHHHHHHHCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---EEECCCCCEEEEEC----
Q ss_conf 89999997337--8778777789999999745999999999999999999999985897---86169864788656----
Q T0636 213 SELIAAMKRKQ--WFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY---RVASSEANFVLVEN---- 283 (336)
Q Consensus 213 ~~~i~~l~~~~--~~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~---~~~~s~~~Fi~~~~---- 283 (336)
+++.+.++... .+|+-|.++..++.+.|+.-+. +...+...+.-+++.+.|+++.- .-....|.++-+++
T Consensus 308 ~~i~~~~~~~~~~~Tf~gnp~~~Aaa~a~l~~i~~-~~l~~~~~~~g~~l~~~L~~l~~~~v~~vRG~Gl~~~i~l~~~~ 386 (439)
T 2oat_A 308 DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE-ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETK 386 (439)
T ss_dssp HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCS
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCC
T ss_conf 88996347888677888798999989999999870-36116999999999999985523662220357628999982688
Q ss_pred -CCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHH
Q ss_conf -988999999987693896077888887478874---798999999999999984
Q T0636 284 -AAGERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYSD 334 (336)
Q Consensus 284 -~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e 334 (336)
.++..+.+.+.++|++++++. .+.||++- -+++|+++++++|++...
T Consensus 387 ~~~~~~~~~~~~~~Gll~~~~~----~~~irl~PpL~it~~eid~~~~~l~~al~ 437 (439)
T 2oat_A 387 DWDAWKVCLRLRDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp SCCHHHHHHHHHHTTEECCBSS----SSEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 6019999999996993893379----99899979968899999999999999997
No 148
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.51 E-value=7.7e-12 Score=94.96 Aligned_cols=314 Identities=15% Similarity=0.116 Sum_probs=172.5
Q ss_pred CCCCCEECCCC--CCCCCC-CHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHH-
Q ss_conf 66553573576--548887-6899999999987500588--98618999999998488854388607788999999998-
Q T0636 13 AAAQAVCLAFN--ENPEAV-EPRVQAAIAAAAARINRYP--FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAE- 86 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~p-~~~v~~al~~~~~~~~~Yp--d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~- 86 (336)
.+++.||..++ -+.+|- .|.+.+|+++.++....+. ......+.+.+.+..+ ..+.+..+++++++....++.
T Consensus 50 dG~~ylD~~~~~~~~~lGh~~p~v~~A~~~q~~~~~~~~~~~~~~~~la~~~~~~~~-~~~~v~f~~sGseAve~Alk~a 128 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLRIM 128 (427)
T ss_dssp TSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC-CCCCCEECCCCHHHHHHHHHHH
T ss_conf 889999706208977316895999999999998457655304579999998764087-6554401587068999999999
Q ss_pred --HCC-CCEEECCCCCHHHHHHH--------HHHCCCEEE-E--CCCC----CCCCCHHHHHHHCC---HH-HHHHHCCC
Q ss_conf --469-92576388735699999--------981880364-1--5543----56778899973000---24-31330366
Q T0636 87 --FSS-MRFVTAWPGFDGYRARI--------AVSGLRHFE-I--GLTD----DLLLDPNDLAQVSR---DD-CVVLANPS 144 (336)
Q Consensus 87 --~~~-~~vii~~P~y~~y~~~~--------~~~g~~~~~-v--p~~~----~~~~d~~~l~~~~~---~~-~i~l~nPn 144 (336)
+.+ ..|+...-+|-+....+ ...+..... + +... ...-|++++++..+ .+ +.+|..|=
T Consensus 129 r~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~~~~~~~~iaavi~Epi 208 (427)
T 3fq8_A 129 RAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPI 208 (427)
T ss_dssp HHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSS
T ss_pred HHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 98408987999946655787512210688643468998889876666631036710399999999738997699998023
Q ss_pred -CCCCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCCCHHH---HCCCHHHHHHHHHHHCCCCCCCEEECCCHHH
Q ss_conf -33222223----79999999737872-025210025886620033---2452001202346523343453131178899
Q T0636 145 -NPTGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRARGLA---YGENELVFRSFSKSYGLAGLRLGALFGPSEL 215 (336)
Q Consensus 145 -NPTG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~~~l~---~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~ 215 (336)
-=.|...+ .++|.+++++++.+ |+||+...|.....-... ..|+++ +++|..| .|+-+|.+++.+++
T Consensus 209 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~~~~~~~a~~~~gi~PDiv---~~gK~l~-gG~p~~av~~~~~i 284 (427)
T 3fq8_A 209 VGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLT---TLGKIIG-GGLPVGAYGGKREI 284 (427)
T ss_dssp BCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEE---EECGGGG-TTSSCEEEEECHHH
T ss_pred CCCCCCEECCHHHHHHHHHHHHHHCEEEEECCCCEECCCCCCCCHHHCCCCHHHH---HHHCCCC-CCCEEEEEEEHHHH
T ss_conf 6888856389999999999999754068844665231332467423238872776---6410357-97214666421999
Q ss_pred HHHHHHCC-----CCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHH-HHHHHHHHHHHCCCE--EECCCCC--EEEEEC
Q ss_conf 99997337-----877877778999999974599--99999999999-999999999858978--6169864--788656
Q T0636 216 IAAMKRKQ-----WFCNVGTLDLHALEAALDNDR--AREAHIAKTLA-QRRRVADALRGLGYR--VASSEAN--FVLVEN 283 (336)
Q Consensus 216 i~~l~~~~-----~~~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~-~r~~l~~~l~~lg~~--~~~s~~~--Fi~~~~ 283 (336)
.+.+.... .+|+-|.++..++.+.|+.-. .+.+.+++.-. -++.+.+..++.+.. +..-.+. +.|.+.
T Consensus 285 ~~~~~~~~~~~~~~T~~~npl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~v~~vg~m~gi~f~~~ 364 (427)
T 3fq8_A 285 MQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEG 364 (427)
T ss_dssp HTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSC
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECC
T ss_conf 97633146776667868883477777766555421146665011456666777877765599717755187689997246
Q ss_pred ----------CCH---HHHHHHHHHCCCEEEECCCCCCCCEEEEEE-CCHHHHHHHHHHHHHHHHC
Q ss_conf ----------988---999999987693896077888887478874-7989999999999999842
Q T0636 284 ----------AAG---ERTLRFLRERGIQVKDAGQFGLHHHIRISI-GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 284 ----------~~~---~~~~~~L~~~gi~vr~~~~fg~~~~iRis~-~~~ee~~~l~~aL~~~~e~ 335 (336)
.+. ..+...|.++||+++|+.. ..+ -+|. -|++|++++++++++.+++
T Consensus 365 ~v~~~~~~~~~d~~~~~~~~~~ll~~GI~l~p~~~---~~~-f~sl~~te~dId~~l~al~~al~~ 426 (427)
T 3fq8_A 365 PVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF---EAG-FTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp CCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT---SCE-ECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHCCCHHHHHHHHHHHHHCCEEECCCCC---CCE-ECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 77797886126499999999999979989888887---365-277778899999999999999973
No 149
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, csgid, cytoplasm, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis}
Probab=99.51 E-value=2.1e-11 Score=92.17 Aligned_cols=314 Identities=12% Similarity=0.152 Sum_probs=171.4
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCCCCCCHHH-HHHHHHHHHCCCHHHEEEECCHHHHHHHHHH---
Q ss_conf 66553573576--54888-76899999999987500588986189-9999999848885438860778899999999---
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRYPFDAEPR-VMRKLAEHFSCPEDNLMLVRGIDECFDRISA--- 85 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Ypd~~~~~-Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~--- 85 (336)
.+++.||+.++ -+.+| --|.+.+|+++.+++...+....... ....+.....-..+++..+++++|+....++
T Consensus 53 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~sGseA~e~AlklAr 132 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVAR 132 (434)
T ss_dssp TCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 88999985658987123479599999999999738854677257999999997526643046633884089999999998
Q ss_pred HHCC-CCEEECCCCCHHHHHHH-HHHCCC--EE------EECC--CC----CCCCCHHHHHHHC---CHH-HHHHHCC-C
Q ss_conf 8469-92576388735699999-981880--36------4155--43----5677889997300---024-3133036-6
Q T0636 86 EFSS-MRFVTAWPGFDGYRARI-AVSGLR--HF------EIGL--TD----DLLLDPNDLAQVS---RDD-CVVLANP-S 144 (336)
Q Consensus 86 ~~~~-~~vii~~P~y~~y~~~~-~~~g~~--~~------~vp~--~~----~~~~d~~~l~~~~---~~~-~i~l~nP-n 144 (336)
.+.+ ..|+...-+|-+....+ ...+.. .. .+|. .. ...-+.+.+++.. ..+ +.++..| .
T Consensus 133 ~~t~r~~vi~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~iaaviiEPi~ 212 (434)
T 3l44_A 133 AYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIV 212 (434)
T ss_dssp HHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSB
T ss_pred HHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 85299969999788668877575503798765799986799876566554677454999999998479974799968642
Q ss_pred CCCCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCC---CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHH
Q ss_conf 33222223----79999999737872-02521002588662---003324520012023465233434531311788999
Q T0636 145 NPTGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRA---RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELI 216 (336)
Q Consensus 145 NPTG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~---~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i 216 (336)
.-.|.+.+ .++|.++|++++.+ |+||++..|..... ......|+++ +|+|..| .|+-+|.+++.+++.
T Consensus 213 g~~G~~~p~~~yl~~lr~lc~~~gilLI~DEV~tG~~~g~~~~~~~~gv~PDiv---~~gK~lg-gG~p~~av~~~~~i~ 288 (434)
T 3l44_A 213 GNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLT---ALGKVIG-GGLPIGAYGGKKEIM 288 (434)
T ss_dssp CTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEE---EEEGGGG-TTSSCEEEEECHHHH
T ss_pred CCCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCHHH---EECCCCC-CCCCCEEEEEHHHHH
T ss_conf 669958898999999999998629779986573123443555455328883343---0103567-876311144529999
Q ss_pred HHHHHCC-----CCCCCCHHHHHHHHHHHHH--HHHHHHHHHHH-HHHHHHHHHHHHHCCCE--EECCCCCEE--EEEC-
Q ss_conf 9997337-----8778777789999999745--99999999999-99999999999858978--616986478--8656-
Q T0636 217 AAMKRKQ-----WFCNVGTLDLHALEAALDN--DRAREAHIAKT-LAQRRRVADALRGLGYR--VASSEANFV--LVEN- 283 (336)
Q Consensus 217 ~~l~~~~-----~~~~~~~~~~~aa~~~l~~--~~~~~~~~~~~-~~~r~~l~~~l~~lg~~--~~~s~~~Fi--~~~~- 283 (336)
+.+.... .+|+-|.++..++.+.|+- .+.+.++.++. ..-++.+.+.+++.+.. .....|.|- |.+.
T Consensus 289 ~~~~~~~~~~~~sT~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~v~~~~~~g~~~~~~~~~~ 368 (434)
T 3l44_A 289 EQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNT 368 (434)
T ss_dssp TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSC
T ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCC
T ss_conf 98612688746689998706668999999999716789999999999999999999877998899724877899980577
Q ss_pred C---------CH---HHHHHHHHHCCCEEEECCCCCCCCEEEEEE-CCHHHHHHHHHHHHHHHH
Q ss_conf 9---------88---999999987693896077888887478874-798999999999999984
Q T0636 284 A---------AG---ERTLRFLRERGIQVKDAGQFGLHHHIRISI-GREEDNDRLLAALAEYSD 334 (336)
Q Consensus 284 ~---------~~---~~~~~~L~~~gi~vr~~~~fg~~~~iRis~-~~~ee~~~l~~aL~~~~e 334 (336)
. +. ..++..|.++||+++|+. .+-+++|. -|++|++++++++++.++
T Consensus 369 v~~~~~~~~~~~~~~~~~~~~~l~~Gv~~~p~~----~~~~~is~~~t~eeid~~~~~l~~al~ 428 (434)
T 3l44_A 369 IEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEAVGRAFA 428 (434)
T ss_dssp CCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST----TCCEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHCCCHHHHHHHHHHHHHCCEEECCCC----CCCEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 678787613659999999999997993982689----842558888829999999999999999
No 150
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni}
Probab=99.50 E-value=9.4e-13 Score=100.87 Aligned_cols=303 Identities=15% Similarity=0.161 Sum_probs=166.0
Q ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHH-----------HCCCCC--CHHHHHHHHHHHHCCCHH-HEEEECCHHHHHHH-H
Q ss_conf 73576548887689999999998750-----------058898--618999999998488854-38860778899999-9
Q T0636 19 CLAFNENPEAVEPRVQAAIAAAAARI-----------NRYPFD--AEPRVMRKLAEHFSCPED-NLMLVRGIDECFDR-I 83 (336)
Q Consensus 19 ~L~~Nenp~~p~~~v~~al~~~~~~~-----------~~Ypd~--~~~~Lr~aia~~~~v~~d-~I~~t~Gs~~~i~~-~ 83 (336)
+++|+.-|-..|+.|++++.+...+. ||=|+- -..+.++.+.+.++++.+ .|++..|++.++.. +
T Consensus 6 ~~~F~pGP~~lp~~V~~~~~~~~~~~~~~~~~~leisHRs~eF~~l~~~~~~~L~~l~~~p~~y~v~~~~~g~t~~e~ai 85 (361)
T 3m5u_A 6 KINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMI 85 (361)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH
T ss_conf 67617899999999999999875321246863224476887899999999999999968999868999689569999999
Q ss_pred HHHH-CCCCEEECCCCCHHH--HHHHHHHCCCEEEECCCCCCCCCHHHHHHHC-CHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 9984-699257638873569--9999981880364155435677889997300-02431330366332222237999999
Q T0636 84 SAEF-SSMRFVTAWPGFDGY--RARIAVSGLRHFEIGLTDDLLLDPNDLAQVS-RDDCVVLANPSNPTGQALSAGELDQL 159 (336)
Q Consensus 84 ~~~~-~~~~vii~~P~y~~y--~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~-~~~~i~l~nPnNPTG~~~~~~~l~~l 159 (336)
...+ +++++++..=++.+- ...++.+|..+..+....+-.++++...... +...+.++.-+..||.....
T Consensus 86 ~~~~~~~~~vl~~~nG~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 159 (361)
T 3m5u_A 86 PMNLALNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRVEFSDNADYAYICSNNTIYGTQYQN------ 159 (361)
T ss_dssp HHHHCCSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCCCCCTTSSEEEEESEETTTTEECSS------
T ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCC------
T ss_conf 86456787058842775887999999872986300023445787760222046665079851334676765422------
Q ss_pred HHHC-CCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC-------------
Q ss_conf 9737-87202521002588662003324520012023465233434531311788999999733787-------------
Q T0636 160 RQRA-GKLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF------------- 225 (336)
Q Consensus 160 ~~~~-~~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~~~~~~------------- 225 (336)
++.+ ..+|||.+ ..|+...... .. -+ +.+-|-+|.++.||+ ++++.+++.++.......+
T Consensus 160 ~~~~~~l~ivDav-Ss~g~~~id~-~~-~d-v~~~s~qk~~~ppG~--~~v~~~~~ale~~~~~~~~~~~~~~~~~~~~~ 233 (361)
T 3m5u_A 160 YPKTKTPLIVDAS-SDFFSRKVDF-SN-IA-LFYGGVQKNAGISGL--SCIFIRKDMLERSKNKQIPSMLNYLTHAENQS 233 (361)
T ss_dssp CCCCSSCEEEECG-GGTTSSCCCC-TT-EE-EEEEETTTTSSCTTC--EEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTT
T ss_pred CCCCCCCEEEECC-CCCCCCCCCH-HH-CC-EEEEECCCCCCCCCH--HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCC
T ss_conf 5667875588645-3211455578-89-45-677762324688531--01210599997542456751767889876244
Q ss_pred --CCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEEC------CCCC--EEEEECCCHHH-HH
Q ss_conf --7877778999999974---599999999999999999999998589-78616------9864--78865698899-99
Q T0636 226 --CNVGTLDLHALEAALD---NDRAREAHIAKTLAQRRRVADALRGLG-YRVAS------SEAN--FVLVENAAGER-TL 290 (336)
Q Consensus 226 --~~~~~~~~~aa~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~~lg-~~~~~------s~~~--Fi~~~~~~~~~-~~ 290 (336)
.+.+.........+++ .....+...++..+.++.+...++..+ +...+ |.+. |.+.+..+.+. ..
T Consensus 234 ~~~t~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~tv~~~~~~~~~~~~~~f~ 313 (361)
T 3m5u_A 234 LFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFV 313 (361)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHH
T ss_conf 46688752188899999999871661789999999999999999727775446768765776279999389775899999
Q ss_pred HHHHHCCCEEEECCCCCCCCEEEEEE-C--CHHHHHHHHHHHHHHHHC
Q ss_conf 99987693896077888887478874-7--989999999999999842
Q T0636 291 RFLRERGIQVKDAGQFGLHHHIRISI-G--REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 291 ~~L~~~gi~vr~~~~fg~~~~iRis~-~--~~ee~~~l~~aL~~~~e~ 335 (336)
+.|.++|+.+..| ++.-+.+|||. + +.|++++|+++|+||.++
T Consensus 314 ~~l~~~Gi~~~~G--~~~~g~~RIs~~~~~~~e~v~~L~~~~~ef~~~ 359 (361)
T 3m5u_A 314 KEAEEAGMIGLKG--HRILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp HHHHHTTEECCBC--CTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEECC--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999889875217--775670488805889999999999999999986
No 151
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.50 E-value=7.7e-11 Score=88.50 Aligned_cols=305 Identities=16% Similarity=0.039 Sum_probs=176.7
Q ss_pred CCHHHHHHHHHHHHH-H---HCCCCCCH--HHHHHHHHHHHCCCHHH-----EEEECCHHHHHHHHHHHH----------
Q ss_conf 768999999999875-0---05889861--89999999984888543-----886077889999999984----------
Q T0636 29 VEPRVQAAIAAAAAR-I---NRYPFDAE--PRVMRKLAEHFSCPEDN-----LMLVRGIDECFDRISAEF---------- 87 (336)
Q Consensus 29 p~~~v~~al~~~~~~-~---~~Ypd~~~--~~Lr~aia~~~~v~~d~-----I~~t~Gs~~~i~~~~~~~---------- 87 (336)
+.|.+.+.+.+..+. + ..||-... .+..+.+++.+|.+... =..|.|+++++.+...+.
T Consensus 54 ~~~~a~~l~~~~~~~N~~~~~~~P~~~~lE~~v~~~la~L~g~p~~~~~~~~G~~t~G~sea~l~a~~aar~~~~~~~~~ 133 (452)
T 2dgk_A 54 DDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEA 133 (452)
T ss_dssp CCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999999999984378885437329999999999999970999532578657311436899999999999999877654
Q ss_pred ---C-CCCEEECCCCCHHHHHHHHHHCCCEEEECCCC-CCCCCHHHHHHHCC--HHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf ---6-99257638873569999998188036415543-56778899973000--24313303663322222379999999
Q T0636 88 ---S-SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD-DLLLDPNDLAQVSR--DDCVVLANPSNPTGQALSAGELDQLR 160 (336)
Q Consensus 88 ---~-~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~-~~~~d~~~l~~~~~--~~~i~l~nPnNPTG~~~~~~~l~~l~ 160 (336)
. ...++++...-.....+++.+|+++..+|.++ ++.+|++++++..+ +.+|+.+.++|.||.+-+.++|.+++
T Consensus 134 ~g~~~~~~~~~s~~~H~s~~Kaa~~~gi~~~~vp~~~~~~~~d~~~l~~~i~~~t~~vv~~~gtt~tG~~dpi~~i~~i~ 213 (452)
T 2dgk_A 134 AGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDAL 213 (452)
T ss_dssp TTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHH
T ss_conf 06887761799776319999999984995429845388873279999998653655357745760678757710567899
Q ss_pred H------HCC-CCCCCCCCCCCC-CCCCCHHH---HCCCH-HHHHHHHHHHCCCCCCCEEECC-CHHHHHHHHHC-----
Q ss_conf 7------378-720252100258-86620033---24520-0120234652334345313117-88999999733-----
Q T0636 161 Q------RAG-KLLIDETYVDYS-SFRARGLA---YGENE-LVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRK----- 222 (336)
Q Consensus 161 ~------~~~-~~IvDeaY~~f~-~~~~~~l~---~~~n~-iv~~S~SK~~gl~GlRiG~~i~-~~~~i~~l~~~----- 222 (336)
+ ..+ ++-||.||..|. +....... .-+++ .+.-|.-|.+. ...-+|+++. +++........
T Consensus 214 ~~~~~a~~~~i~~HVDaA~gg~~~~~~~~~~~~~~~~~~~DSi~~s~HK~~~-~P~g~g~l~~r~~~~~~~~~~~~~~yl 292 (452)
T 2dgk_A 214 DKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGL-APLGCGWVIWRDEEALPQELVFNVDYL 292 (452)
T ss_dssp HHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEECCT
T ss_pred HHHHHHHHCCCEEEEECHHCCCEEEEEHHHHHHHCCCCCCCEEECCCCCCCC-CCCCEEEEEECCHHHHHHHHCCCCCCC
T ss_conf 9998875059269986023043235322225554255466412136332478-888716888636455333212345644
Q ss_pred ---CCCCCC----CHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEE-CC---CC-CEEEEEC----
Q ss_conf ---787787----7778999999974--599999999999999999999998589-7861-69---86-4788656----
Q T0636 223 ---QWFCNV----GTLDLHALEAALD--NDRAREAHIAKTLAQRRRVADALRGLG-YRVA-SS---EA-NFVLVEN---- 283 (336)
Q Consensus 223 ---~~~~~~----~~~~~~aa~~~l~--~~~~~~~~~~~~~~~r~~l~~~l~~lg-~~~~-~s---~~-~Fi~~~~---- 283 (336)
...+++ +........+.+. ..+-+++.++......+++.+.|++++ +++. ++ .. +.+-++.
T Consensus 293 ~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~el~~~~~p~~~~~~v~f~~~~~~ 372 (452)
T 2dgk_A 293 GGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE 372 (452)
T ss_dssp TCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCC
T ss_conf 77777765556777301334456677615306899999999999999999986898499977888752589999545755
Q ss_pred ---CCHHHHHHHHHHCCCEEEECCCC---CCCCEEEEEEC---CHHHHHHHHHHHHHHHH
Q ss_conf ---98899999998769389607788---88874788747---98999999999999984
Q T0636 284 ---AAGERTLRFLRERGIQVKDAGQF---GLHHHIRISIG---REEDNDRLLAALAEYSD 334 (336)
Q Consensus 284 ---~~~~~~~~~L~~~gi~vr~~~~f---g~~~~iRis~~---~~ee~~~l~~aL~~~~e 334 (336)
.+..++.+.|.++|+.|.....+ .....+|++++ +.++.++|++.|++..+
T Consensus 373 ~~~~~~~~la~~L~~~G~~v~a~~~p~~~~~~~vlRv~v~~~~t~e~id~~v~dl~~~v~ 432 (452)
T 2dgk_A 373 DPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp CCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 689789999999997598322256787666857999984699999999999999999999
No 152
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.49 E-value=8.5e-11 Score=88.21 Aligned_cols=306 Identities=18% Similarity=0.157 Sum_probs=181.6
Q ss_pred CCCCCEECCC--CCCCCC-CCHHHHHHHHHHHHHHHCCCCCCHH----HHHHHHHHHHCCCHHHEEEECCHHHHHHHHHH
Q ss_conf 6655357357--654888-7689999999998750058898618----99999999848885438860778899999999
Q T0636 13 AAAQAVCLAF--NENPEA-VEPRVQAAIAAAAARINRYPFDAEP----RVMRKLAEHFSCPEDNLMLVRGIDECFDRISA 85 (336)
Q Consensus 13 ~~~~~i~L~~--Nenp~~-p~~~v~~al~~~~~~~~~Ypd~~~~----~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~ 85 (336)
.+++.||..+ +-+.+| -.|.+.+|+.+.+......+..... ++-+.+.....-.-+.+..+++++|+...+++
T Consensus 43 dG~~~iD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseAve~Alk 122 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALK 122 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
T ss_conf 97999985607876645179699999999999750324664564056676653033233444303421575348999999
Q ss_pred H---HCC-CCEEECCCCCHHHHHHHHHH-CC------------CEEEECCCCCCCCCHHHHHHHCCHHH-HHHHCC--CC
Q ss_conf 8---469-92576388735699999981-88------------03641554356778899973000243-133036--63
Q T0636 86 E---FSS-MRFVTAWPGFDGYRARIAVS-GL------------RHFEIGLTDDLLLDPNDLAQVSRDDC-VVLANP--SN 145 (336)
Q Consensus 86 ~---~~~-~~vii~~P~y~~y~~~~~~~-g~------------~~~~vp~~~~~~~d~~~l~~~~~~~~-i~l~nP--nN 145 (336)
. +.+ ..++...-+|-+....+... +. .+..+|. -|++.+++..+.+. .+|..| .+
T Consensus 123 ~ar~~t~r~~ii~~~~~yHG~t~~a~~~s~~~~~~~~~~p~~~~~~~~p~-----nd~~~l~~~~~~~iaavi~EPi~g~ 197 (395)
T 1vef_A 123 FARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEETAAVILEPVQGE 197 (395)
T ss_dssp HHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTTEEEEEECSEETT
T ss_pred HHHHHCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECC-----CCHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 98871334223122467899864337634786556788788998268678-----9799999756897479999787787
Q ss_pred CCCCCCC-H---HHHHHHHHHCCCCC-CCCCCCCCCCCCC----CHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHH
Q ss_conf 3222223-7---99999997378720-2521002588662----003324520012023465233434531311788999
Q T0636 146 PTGQALS-A---GELDQLRQRAGKLL-IDETYVDYSSFRA----RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELI 216 (336)
Q Consensus 146 PTG~~~~-~---~~l~~l~~~~~~~I-vDeaY~~f~~~~~----~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i 216 (336)
.|.... . ++++++++++++++ +||+...|...-. ......|+++ +++|..| .|+-++.++...+++
T Consensus 198 -~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tGfgRtG~~~~~~~~gv~PDi~---~~gK~l~-~G~~~~a~~~~~~~~ 272 (395)
T 1vef_A 198 -GGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL---TLAKALG-GGVPLGVAVMREEVA 272 (395)
T ss_dssp -TTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGG-TTSSCEEEEEEHHHH
T ss_pred -CCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---EEEECCC-CCCCCCCCCCCEEEE
T ss_conf -78854998999999999998691698411211577367775422578677778---9703477-867775433310232
Q ss_pred HHHHHCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE---ECCCCCEEEE--ECCCHHHH
Q ss_conf 9997337--877877778999999974599999999999999999999998589786---1698647886--56988999
Q T0636 217 AAMKRKQ--WFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRV---ASSEANFVLV--ENAAGERT 289 (336)
Q Consensus 217 ~~l~~~~--~~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~---~~s~~~Fi~~--~~~~~~~~ 289 (336)
+.+.... .+|+-|.++..++.+.|+--. -.+..++....-+++.+.|+++.-+. ....|.+.-+ +.+.+..+
T Consensus 273 ~~~~~~~~~~T~~gnpla~aAa~a~L~~i~-~~~~~~~~~~~g~~l~~~L~~l~~~~v~~vrg~G~m~~i~~~~~~~~~~ 351 (395)
T 1vef_A 273 RSMPKGGHGTTFGGNPLAMAAGVAAIRYLE-RTRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKEKAAPYI 351 (395)
T ss_dssp HTSCTTSSCCSSTTCHHHHHHHHHHHHHHH-HHTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESSCSHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCHHHHCCCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCHHHH
T ss_conf 022368735537998620021010122212-3220147999748999999961798579852454899999717756899
Q ss_pred HHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHH
Q ss_conf 999987693896077888887478874---79899999999999998
Q T0636 290 LRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYS 333 (336)
Q Consensus 290 ~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~ 333 (336)
.+.+.++|+++.+.. ++.+|++- -|.+|++++++++++.+
T Consensus 352 ~~~~~~~g~l~~~~g----~~~i~~~PpL~it~~eid~~l~~l~~aL 394 (395)
T 1vef_A 352 ARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp HHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 999997897699428----9999997972499999999999999985
No 153
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} SCOP: c.67.1.4
Probab=99.49 E-value=2.5e-11 Score=91.62 Aligned_cols=321 Identities=19% Similarity=0.192 Sum_probs=196.3
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH--HHCCCCC-CH-----HHH-----HHHHHHHHCCCHH-
Q ss_conf 11578975036655357357654888768999999999875--0058898-61-----899-----9999998488854-
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPFD-AE-----PRV-----MRKLAEHFSCPED- 68 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~--~~~Ypd~-~~-----~~L-----r~aia~~~~v~~d- 68 (336)
|.++++.+...-.+-|.|--.||- .+|.|++++...+.+ .-.||.. .| ..- .+...+.++.+..
T Consensus 42 i~~~i~~E~~rQ~~~l~LIaSEN~--~S~~v~~a~gS~ltnkYaEG~Pg~RyY~G~~~iD~iE~la~~ra~~lF~~~~a~ 119 (490)
T 2a7v_A 42 MWELLQREKDRQCRGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQ 119 (490)
T ss_dssp HHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTT
T ss_pred HHHHHHHHHHHHHCCCEEECCCCC--CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 999999999998668358767664--799999985682115444789985435776689999999999999984885001
Q ss_pred ---HEEEECCHHHHHHHHHHHH-CCCCEEECCCCCHHHHHH--------HHHHCC--CEEEECCC-CCCCCCHHHHHHH-
Q ss_conf ---3886077889999999984-699257638873569999--------998188--03641554-3567788999730-
Q T0636 69 ---NLMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRAR--------IAVSGL--RHFEIGLT-DDLLLDPNDLAQV- 132 (336)
Q Consensus 69 ---~I~~t~Gs~~~i~~~~~~~-~~~~vii~~P~y~~y~~~--------~~~~g~--~~~~vp~~-~~~~~d~~~l~~~- 132 (336)
||-.-+|++..+......+ +||+|+.++..-.++... ....|. +...++.+ +++.+|.+++++.
T Consensus 120 ~~vNVqp~SGs~AN~av~~all~pGD~im~l~l~~GGHlsHg~~~~~~~~~~~~~~~~~~~Y~~d~~~~~IDyd~l~~~a 199 (490)
T 2a7v_A 120 WGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTA 199 (490)
T ss_dssp EEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHH
T ss_conf 26687868728999999997617786598633666776545533566665214567666777532788858489999998
Q ss_pred --CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCC-CC--CCCCCCHHHHCCCHHHHHHHHHHHCCCCCCC
Q ss_conf --002431330366332222237999999973787-20252100-25--8866200332452001202346523343453
Q T0636 133 --SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DY--SSFRARGLAYGENELVFRSFSKSYGLAGLRL 206 (336)
Q Consensus 133 --~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~-~f--~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRi 206 (336)
.++|+|++..-..| ..++-+++.++++..+. +++|-+.. .+ ++....++... + ||..|.-|++ +|=|=
T Consensus 200 ~~~kPklIi~G~Say~--r~~d~~~~reIad~vgA~l~~D~aHiaGLIA~g~~~sPl~~a-D-vVtttTHKTl--rGPrg 273 (490)
T 2a7v_A 200 RLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHA-D-IVTTTTHKTL--RGARS 273 (490)
T ss_dssp HHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTC-S-EEEEESSGGG--CSCSC
T ss_pred HHHCCCEEEECCCCCC--CCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCHHHHH-C-EEEEEECCCC--CCCCC
T ss_conf 6407765884320033--446689999887404761882101112211165416866641-1-1222203211--58876
Q ss_pred EEECCCH---------------HHHHHHHHCCCCCCCCH--HHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1311788---------------99999973378778777--78999999-974--5999999999999999999999985
Q T0636 207 GALFGPS---------------ELIAAMKRKQWFCNVGT--LDLHALEA-ALD--NDRAREAHIAKTLAQRRRVADALRG 266 (336)
Q Consensus 207 G~~i~~~---------------~~i~~l~~~~~~~~~~~--~~~~aa~~-~l~--~~~~~~~~~~~~~~~r~~l~~~l~~ 266 (336)
|.+..++ ++.+++.+.--|...+. ....++++ ++. ....+.++.+++..+.+.|.+.|.+
T Consensus 274 GiI~~~~~~~~~~~~~~~~~~~~~~~kId~avFPg~qggph~h~iAa~Ava~~Ea~~~~fk~Ya~qVv~NAkaLA~~L~~ 353 (490)
T 2a7v_A 274 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE 353 (490)
T ss_dssp EEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 38997154222455457530256899887565853023432136889999998745806889999999999999999985
Q ss_pred CCCEEECCC--CCEEEEECC----CHHHHHHHHHHCCCEEE----ECCCCC-CCCEEEEEE------C-CHHHHHHHHHH
Q ss_conf 897861698--647886569----88999999987693896----077888-887478874------7-98999999999
Q T0636 267 LGYRVASSE--ANFVLVENA----AGERTLRFLRERGIQVK----DAGQFG-LHHHIRISI------G-REEDNDRLLAA 328 (336)
Q Consensus 267 lg~~~~~s~--~~Fi~~~~~----~~~~~~~~L~~~gi~vr----~~~~fg-~~~~iRis~------~-~~ee~~~l~~a 328 (336)
.|+++...+ ...+|+++. ++..+.+.|.+.||.+. |++... .+..|||.. | .++||+++.+.
T Consensus 354 ~G~~vv~ggTdnHlvlvdl~~~g~~G~~ae~~Le~~gI~vNkn~iP~D~s~~~~sGiRiGT~alTtrG~~e~dm~~IA~~ 433 (490)
T 2a7v_A 354 RGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDF 433 (490)
T ss_dssp TTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHH
T ss_pred CCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHH
T ss_conf 79723248888626998635568866899999998691778774789998899984476688998589988999999999
Q ss_pred HHH
Q ss_conf 999
Q T0636 329 LAE 331 (336)
Q Consensus 329 L~~ 331 (336)
|.+
T Consensus 434 I~~ 436 (490)
T 2a7v_A 434 IDE 436 (490)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 154
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.48 E-value=6.5e-11 Score=88.96 Aligned_cols=278 Identities=10% Similarity=0.047 Sum_probs=158.9
Q ss_pred HHHHHHHHHCCCHH--HEEEECCHHHHHHHHHHHH-----CCCCEEECCCCCHHHHHHHHHHCCCEEEECC---CCCCCC
Q ss_conf 99999998488854--3886077889999999984-----6992576388735699999981880364155---435677
Q T0636 55 VMRKLAEHFSCPED--NLMLVRGIDECFDRISAEF-----SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL---TDDLLL 124 (336)
Q Consensus 55 Lr~aia~~~~v~~d--~I~~t~Gs~~~i~~~~~~~-----~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~---~~~~~~ 124 (336)
+...+++.+|++.. .++++.|+...+.+++.++ .++.|+++.=.-.....++.+.|...+.++. ++.+..
T Consensus 121 ~v~~~~~l~g~~~~~~~~~~~~~t~~~l~~~l~a~~~~~~~~~~ii~~~~aH~S~~ka~~~~G~~~v~v~~~~~~~~~~~ 200 (501)
T 3hl2_A 121 LVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRT 200 (501)
T ss_dssp HHHHHHHHTTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEE
T ss_pred HHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEEEECCHHCCCC
T ss_conf 99999997199988865761662599999999999983889998999772148999999980994689973125010463
Q ss_pred CHHHHHHHCC---HH---HHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCC---CHH-HHCCCHHHHH
Q ss_conf 8899973000---24---31330366332222237999999973787-202521002588662---003-3245200120
Q T0636 125 DPNDLAQVSR---DD---CVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRA---RGL-AYGENELVFR 193 (336)
Q Consensus 125 d~~~l~~~~~---~~---~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~---~~l-~~~~n~iv~~ 193 (336)
|++++++..+ .+ +++.+.|+.+.|.+-+.++|.++++++++ +++|+||.-+..... ... ....=-+++.
T Consensus 201 d~~~le~~i~~~~~~~~~~v~~t~~~~~~g~~d~i~~I~~l~~~~~i~~~~d~a~g~~~~~~~~~~~~~~~~g~~D~v~~ 280 (501)
T 3hl2_A 201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQ 280 (501)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEE
T ss_pred CHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCHHHCCCCCCCEEEE
T ss_conf 89999999976134571799966899888666549999999999699599967757764201556332025688337980
Q ss_pred HHHHHHCCCCCCCEEEC-CCHHHHHHHHHCCCCCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q ss_conf 23465233434531311-788999999733787787777899--99999745999999999999999999999985----
Q T0636 194 SFSKSYGLAGLRLGALF-GPSELIAAMKRKQWFCNVGTLDLH--ALEAALDNDRAREAHIAKTLAQRRRVADALRG---- 266 (336)
Q Consensus 194 S~SK~~gl~GlRiG~~i-~~~~~i~~l~~~~~~~~~~~~~~~--aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~---- 266 (336)
|..|.++.| .-.|++. .++++++.+.+.......+.+... +....+. .+-+++..++.....+++.+.|++
T Consensus 281 s~hK~l~~p-~gg~il~~~~~~~~~~i~~~y~g~~s~~p~~~~~asl~~~g-~~~~~~~~~~~~~~~~~l~~~L~~i~~~ 358 (501)
T 3hl2_A 281 SLDKNFMVP-VGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLG-SNGYKKLLKERKEMFSYLSNQIKKLSEA 358 (501)
T ss_dssp EHHHHHCCC-SSCEEEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCC-CCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 288646678-88765522886788878753589876267799999999999-9889999999999999999999998764
Q ss_pred CCCEEECCCCCEEEE--EC--------CCHHHHHHHHHHCCCEE----EE----------CCCCCC------CCEEEE--
Q ss_conf 897861698647886--56--------98899999998769389----60----------778888------874788--
Q T0636 267 LGYRVASSEANFVLV--EN--------AAGERTLRFLRERGIQV----KD----------AGQFGL------HHHIRI-- 314 (336)
Q Consensus 267 lg~~~~~s~~~Fi~~--~~--------~~~~~~~~~L~~~gi~v----r~----------~~~fg~------~~~iRi-- 314 (336)
.|.++....+|.++. .+ .+...+...|.+.||.. .+ +..+|. ..|+.+
T Consensus 359 ~~~~~l~~~~n~~~~~i~~~~~~~~~~~d~~~l~~~L~~~gi~g~~v~~~~~~~~i~~~~~~~~g~~~e~~~~~~i~~~~ 438 (501)
T 3hl2_A 359 YNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAAS 438 (501)
T ss_dssp TTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEEC
T ss_pred CCCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEC
T ss_conf 28163357988526887313346555668899999999759876311046765420221000158655557776189980
Q ss_pred EEC-CHHHHHHHHHHHHHHHH
Q ss_conf 747-98999999999999984
Q T0636 315 SIG-REEDNDRLLAALAEYSD 334 (336)
Q Consensus 315 s~~-~~ee~~~l~~aL~~~~e 334 (336)
++| +++|+++|+++|++..+
T Consensus 439 siG~~kediD~~v~~L~ki~~ 459 (501)
T 3hl2_A 439 AIGMKMQDVDLFIKRLDRCLK 459 (501)
T ss_dssp CTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH
T ss_conf 278999999999999999999
No 155
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} PDB: 3bs8_A*
Probab=99.48 E-value=4.5e-11 Score=90.02 Aligned_cols=313 Identities=15% Similarity=0.145 Sum_probs=175.8
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHH-
Q ss_conf 66553573576--54888-7689999999998750058--898618999999998488854388607788999999998-
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRY--PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAE- 86 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Y--pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~- 86 (336)
.+++.||+.++ -+.+| -.|.+.+|+++.+.....+ +......|-+.+++... ..+.+..+++++|+...+++.
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~f~~sGseAvE~AlKlA 129 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVP-SIEIVRMVNSGTEATMSALRLA 129 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC-CCCEEEECCCCHHHHHHHHHHH
T ss_conf 579999844078750678797999999999997467666760478999999986488-7766986188438999999999
Q ss_pred --HCCC-CEEECCCCCHHHHHH-HHHHCCCEE--EECC--------C----CCCCCCHHHHHHHC---CHH-HHHHHCC-
Q ss_conf --4699-257638873569999-998188036--4155--------4----35677889997300---024-3133036-
Q T0636 87 --FSSM-RFVTAWPGFDGYRAR-IAVSGLRHF--EIGL--------T----DDLLLDPNDLAQVS---RDD-CVVLANP- 143 (336)
Q Consensus 87 --~~~~-~vii~~P~y~~y~~~-~~~~g~~~~--~vp~--------~----~~~~~d~~~l~~~~---~~~-~i~l~nP- 143 (336)
+.+. .|+....+|-+.... ....+-... ..|. . ....-+++.+.... ..+ +.++.-|
T Consensus 130 r~~tgr~~il~~~~~yHG~t~~~~~~t~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~EPi 209 (429)
T 3k28_A 130 RGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPV 209 (429)
T ss_dssp HHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSS
T ss_pred HHHHCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 87038985999979817986889984457643469999999988757776430122487767899854886438997731
Q ss_pred CCCCCCCCC----HHHHHHHHHHCCCCC-CCCCCCCCCCCCCCH---HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHH
Q ss_conf 633222223----799999997378720-252100258866200---332452001202346523343453131178899
Q T0636 144 SNPTGQALS----AGELDQLRQRAGKLL-IDETYVDYSSFRARG---LAYGENELVFRSFSKSYGLAGLRLGALFGPSEL 215 (336)
Q Consensus 144 nNPTG~~~~----~~~l~~l~~~~~~~I-vDeaY~~f~~~~~~~---l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~ 215 (336)
-.-.|...+ .+.|.++|++++.++ +||++..|....... ....|+++ ++||.+| .|+-++-+++.+++
T Consensus 210 ~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gr~~~~a~~~~~v~PDiv---~~gK~lg-gG~p~~av~~~~ei 285 (429)
T 3k28_A 210 AGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLT---CLGKVIG-GGLPVGAYGGKAEI 285 (429)
T ss_dssp BCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE---EECGGGG-TTSCCEEEEECHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEE---EEEEECC-CCCCCEEEEEHHHH
T ss_conf 3788865789899999999999829899981465445643335510159898668---8834515-87744014457999
Q ss_pred HHHHHHC-----CCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCC--EEECCCCCEEEEECC--
Q ss_conf 9999733-----78778777789999999745--999999999999999999999985897--861698647886569--
Q T0636 216 IAAMKRK-----QWFCNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGLGY--RVASSEANFVLVENA-- 284 (336)
Q Consensus 216 i~~l~~~-----~~~~~~~~~~~~aa~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~~~s~~~Fi~~~~~-- 284 (336)
.+.+..- ..+|+-|.++..++.+.|+- .+.+.+..+....-++.+.+.+++.++ .+. ..|.++-+.+.
T Consensus 286 ~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~Vr-G~Gl~~~ie~~~~ 364 (429)
T 3k28_A 286 MRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRKAAEKHGIPHHIN-RAGSMIGIFFTDE 364 (429)
T ss_dssp HTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE-EETTEEEEESSSS
T ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE-EECCEEEEEEECC
T ss_conf 997432477753578887869999999999997434268899999999999999997589976996-2462899998368
Q ss_pred -----------C---HHHHHHHHHHCCCEEEECCCCCCCCEEEEEE-CCHHHHHHHHHHHHHHHHC
Q ss_conf -----------8---8999999987693896077888887478874-7989999999999999842
Q T0636 285 -----------A---GERTLRFLRERGIQVKDAGQFGLHHHIRISI-GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 -----------~---~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~-~~~ee~~~l~~aL~~~~e~ 335 (336)
+ ...++..+.++||+++|+... .+.++. -|++|++.++++|++..++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~l~p~~~~----~~~~~l~it~~~id~~~~~l~~al~~ 426 (429)
T 3k28_A 365 PVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQFE----GLFLSTVHSDADIEATIAAAEIAMSK 426 (429)
T ss_dssp CCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTS----CBCCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHCCCHHHHHHHHHHHHHCCEEECCCCCE----EEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 777867760254999999999999799897788871----07667778799999999999999998
No 156
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.47 E-value=5.7e-11 Score=89.33 Aligned_cols=324 Identities=19% Similarity=0.216 Sum_probs=200.9
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH--HHCCCC------CCHHHHHHHH-----HHHHCCCHHH
Q ss_conf 11578975036655357357654888768999999999875--005889------8618999999-----9984888543
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPF------DAEPRVMRKL-----AEHFSCPEDN 69 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~--~~~Ypd------~~~~~Lr~ai-----a~~~~v~~d~ 69 (336)
|.++++.+...-.+-|.|=-.||. ++|.|++++...+.. .-.||. -.+..-.|.+ .+.++..--+
T Consensus 33 i~~~i~~E~~Rq~~~l~LIaSEN~--~S~~v~~a~~S~l~nkYaEG~pg~Ryy~G~~~iD~iE~la~~rak~lF~a~~an 110 (447)
T 3h7f_A 33 IAELLAKELGRQRDTLEMIASENF--VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFAN 110 (447)
T ss_dssp HHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCCC--CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999998779548757776--899999984673236466889985442675579999999999999983887534
Q ss_pred EEEECCHHHHHHHHHHHH-CCCCEEECCCCCHHHHH-----HHHHHCCCEEEECCCC-CCCCCHHHHHHH---CCHHHHH
Q ss_conf 886077889999999984-69925763887356999-----9998188036415543-567788999730---0024313
Q T0636 70 LMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRA-----RIAVSGLRHFEIGLTD-DLLLDPNDLAQV---SRDDCVV 139 (336)
Q Consensus 70 I~~t~Gs~~~i~~~~~~~-~~~~vii~~P~y~~y~~-----~~~~~g~~~~~vp~~~-~~~~d~~~l~~~---~~~~~i~ 139 (336)
|-..+|++..+...+..+ +||+|+.+.....++.. .......+...++.+. ++.+|.+++++. .++|+|+
T Consensus 111 Vqp~SGs~AN~av~~all~PGD~il~~~l~~GGHlshg~~~~~~~~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi 190 (447)
T 3h7f_A 111 VQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVII 190 (447)
T ss_dssp CCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEE
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 34575367899999986288970123304667744555544555553213445666034331046899997633675698
Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCC-CC--CCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHH
Q ss_conf 30366332222237999999973787-20252100-25--8866200332452001202346523343453131178899
Q T0636 140 LANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DY--SSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSEL 215 (336)
Q Consensus 140 l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~-~f--~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~ 215 (336)
+..=..| ..++-+++.++++..+. +++|-+.. .+ ++....++... -||..|.-|+| +|=|=|.+..++++
T Consensus 191 ~G~S~y~--r~~d~~~~reIad~vga~l~~D~aHi~GLIAgg~~~~Pl~~a--DvvT~sTHKTl--~GPrgGiI~~~~~~ 264 (447)
T 3h7f_A 191 AGWSAYP--RVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHA--DVVSTTVHKTL--GGGRSGLIVGKQQY 264 (447)
T ss_dssp EECSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTC--SEEEEESSGGG--CCCSCEEEEECGGG
T ss_pred ECCCCCE--ECCCHHHHHHHHHHCCCEEECCCCCCHHHEECCCCCCCCCCC--CEEEEEECCHH--CCCCCEEEEECCHH
T ss_conf 6564532--025689999987630415862342302311132125640110--44764302100--36775157625177
Q ss_pred HHHHHHCCCCCCCCH--HHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHHHH-----HHCCCEEECC--CCCEEEEEC
Q ss_conf 999973378778777--78999999-974--59999999999999999999999-----8589786169--864788656
Q T0636 216 IAAMKRKQWFCNVGT--LDLHALEA-ALD--NDRAREAHIAKTLAQRRRVADAL-----RGLGYRVASS--EANFVLVEN 283 (336)
Q Consensus 216 i~~l~~~~~~~~~~~--~~~~aa~~-~l~--~~~~~~~~~~~~~~~r~~l~~~l-----~~lg~~~~~s--~~~Fi~~~~ 283 (336)
.+.+.+..-|...+. +...++.+ ++. ....+.++.+++..+.+.|.+.| ...|+++... +..-+|+++
T Consensus 265 ~~~i~~avfPg~qg~~h~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAk~La~~L~~~~~~~~G~~vv~GgTdnH~vlvdl 344 (447)
T 3h7f_A 265 AKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDL 344 (447)
T ss_dssp HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEEC
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCC
T ss_conf 88887751866456525667888777764337731888999999999999998754578755914631888766350111
Q ss_pred C----CHHHHHHHHHHCCCEEE----ECCC--CCCCCEEEEEE------C-CHHHHHHHHHHHHHHHH
Q ss_conf 9----88999999987693896----0778--88887478874------7-98999999999999984
Q T0636 284 A----AGERTLRFLRERGIQVK----DAGQ--FGLHHHIRISI------G-REEDNDRLLAALAEYSD 334 (336)
Q Consensus 284 ~----~~~~~~~~L~~~gi~vr----~~~~--fg~~~~iRis~------~-~~ee~~~l~~aL~~~~e 334 (336)
. ++....+.|.+.||.+. |++. +-.+..|||.. | .++||+++.+.+.+...
T Consensus 345 ~~~g~~g~~a~~~Le~agI~vNkn~iP~D~~~~~~~SGIRlGT~alT~rG~~e~em~~IA~lI~~aL~ 412 (447)
T 3h7f_A 345 RDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALA 412 (447)
T ss_dssp TTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 23678789999999983918788889999999988985066888998589988999999999999985
No 157
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomics; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.47 E-value=3.7e-11 Score=90.58 Aligned_cols=275 Identities=17% Similarity=0.178 Sum_probs=159.9
Q ss_pred HCCC---CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHH----HHHHHCCCEEE
Q ss_conf 0588---986189999999984888543886077889999999984--69925763887356999----99981880364
Q T0636 45 NRYP---FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA----RIAVSGLRHFE 115 (336)
Q Consensus 45 ~~Yp---d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~----~~~~~g~~~~~ 115 (336)
..|. .|....|.++||+..+- +.-++++.+..||..++.++ +||+|++..+.|.+... .+..+|+.+..
T Consensus 50 ~~Y~R~~nPt~~~le~~la~Le~~--~~a~~fsSGMaAi~~~~l~l~~~Gd~ii~~~~~Yg~t~~l~~~~~~~~gi~~~~ 127 (421)
T 2ctz_A 50 NIYSRIMNPTVDVLEKRLAALEGG--KAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRF 127 (421)
T ss_dssp GSCBTTBCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEE
T ss_pred CEECCCCCHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 632289887899999999998399--738876176999999987505466621332666764268999987422301100
Q ss_pred ECCCCCCCCCHHHHH--HHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCHHHHCCCHHHH
Q ss_conf 155435677889997--30002431330366332222237999999973787-202521002588662003324520012
Q T0636 116 IGLTDDLLLDPNDLA--QVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVF 192 (336)
Q Consensus 116 vp~~~~~~~d~~~l~--~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~f~~~~~~~l~~~~n~iv~ 192 (336)
+...+ +.+..+ ...++++||+=+|.|||..+.+.+.+.+++++++. +|||..++- +|.-..++...-+ ||+
T Consensus 128 ~d~~~----~~~~~~~~~~~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vvDnT~a~-tP~~~~Pl~~GaD-iVv 201 (421)
T 2ctz_A 128 TSREE----RPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGM-GGYLLRPLAWGAA-LVT 201 (421)
T ss_dssp CCTTC----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGG-GGTSCCGGGGTCS-EEE
T ss_pred CCCCC----CCCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHCCCCEEECCCCCC-CCEECCHHHCCCC-EEE
T ss_conf 35555----73000022477624899714786436644489999998644973674253233-6201562341885-589
Q ss_pred HHHHHHHCCCC-CCCEEECCCHH-------------------------------HHHHHHH-C-CCCC-CCCHHHHHHHH
Q ss_conf 02346523343-45313117889-------------------------------9999973-3-7877-87777899999
Q T0636 193 RSFSKSYGLAG-LRLGALFGPSE-------------------------------LIAAMKR-K-QWFC-NVGTLDLHALE 237 (336)
Q Consensus 193 ~S~SK~~gl~G-lRiG~~i~~~~-------------------------------~i~~l~~-~-~~~~-~~~~~~~~aa~ 237 (336)
.|.||.++--| +=.|.++++.+ .+.+.+. . +... .++......+.
T Consensus 202 hS~TKyl~GHsDvl~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~sp~~a~lll 281 (421)
T 2ctz_A 202 HSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVL 281 (421)
T ss_dssp EETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHH
T ss_pred EEHHHHCCCCCCEEEEEEECCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 74033336888726788752773056533450210132000101499885227999999999998636879979989874
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EE-ECC-----------------CCCEEEEECCCHH-HHHHHHHHC
Q ss_conf 99745999999999999999999999985897--86-169-----------------8647886569889-999999876
Q T0636 238 AALDNDRAREAHIAKTLAQRRRVADALRGLGY--RV-ASS-----------------EANFVLVENAAGE-RTLRFLRER 296 (336)
Q Consensus 238 ~~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~-~~s-----------------~~~Fi~~~~~~~~-~~~~~L~~~ 296 (336)
.-|+. +.-++++..++..++.+.|++... +| ||+ .|.++.+.+..+. ...+++..-
T Consensus 282 RGL~T---L~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~a~~~~~g~~G~~~sf~l~~~~~~a~~f~d~L 358 (421)
T 2ctz_A 282 LGMET---LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRL 358 (421)
T ss_dssp HHHTT---HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTC
T ss_pred CCCCC---HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCC
T ss_conf 58983---477799999989999875513897359965875788139999863479963289999439999999999738
Q ss_pred CCE------------E-EECCC------------CCC-CCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 938------------9-60778------------888-87478874798999999999999
Q T0636 297 GIQ------------V-KDAGQ------------FGL-HHHIRISIGREEDNDRLLAALAE 331 (336)
Q Consensus 297 gi~------------v-r~~~~------------fg~-~~~iRis~~~~ee~~~l~~aL~~ 331 (336)
.++ + -|.+. .|. ++.||+|+|.+. .+.|++-|++
T Consensus 359 ~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~~~~~GI~~~liRlSvGlEd-~eDLi~DL~~ 418 (421)
T 2ctz_A 359 KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLEH-VEDLKAELKE 418 (421)
T ss_dssp SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred CCCEECCCCCCCCCEEECCCCCCCHHCCHHHHHHCCCCCCEEEEEECCCC-HHHHHHHHHH
T ss_conf 84766456653453302831023100899999866989397999752399-9999999998
No 158
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.46 E-value=2.1e-10 Score=85.71 Aligned_cols=269 Identities=12% Similarity=0.159 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCH-HHHHHHHHHCCCEEEECCC-CCC------
Q ss_conf 89999999984888543886077889999999984--6992576388735-6999999818803641554-356------
Q T0636 53 PRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFD-GYRARIAVSGLRHFEIGLT-DDL------ 122 (336)
Q Consensus 53 ~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~-~y~~~~~~~g~~~~~vp~~-~~~------ 122 (336)
.+..+..|+.||.+ ...+++||++.+...++.+. +||.|++..=+=- .|.....+.|...+.++.+ +.+
T Consensus 176 ~eAq~~aA~~fgAd-~t~FlvNGTS~~N~avi~al~~pGD~VLvdRn~HkSv~~~gl~LsGa~Pvyl~p~~n~~G~i~~i 254 (730)
T 1c4k_A 176 VAAEKHAARVYNAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGI 254 (730)
T ss_dssp HHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCEEEE
T ss_pred HHHHHHHHHHHCCC-CEEEECCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
T ss_conf 99999999984999-17998972899999999965698799998361479999999997799769958837666650798
Q ss_pred ---CCCHHHHHHH-----------C-CHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCC---CCCCCCCH-
Q ss_conf ---7788999730-----------0-0243133036633222223799999997378-7202521002---58866200-
Q T0636 123 ---LLDPNDLAQV-----------S-RDDCVVLANPSNPTGQALSAGELDQLRQRAG-KLLIDETYVD---YSSFRARG- 182 (336)
Q Consensus 123 ---~~d~~~l~~~-----------~-~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~-~~IvDeaY~~---f~~~~~~~- 182 (336)
.++.+.+... . ..+++++++|+- .|.+.+.++|.+++++++ .+++|||+.. |.+.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vvit~ptY-~G~i~dl~~I~~~~~~~~~~llvDeAhga~~~f~p~~~~~~ 333 (730)
T 1c4k_A 255 YDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTY-DGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSS 333 (730)
T ss_dssp CGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCT-TSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGC
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCC-CCCCCCHHHHHHHHHHCCCEEEEECHHCCCCCCCCCCCCCH
T ss_conf 82888489876132011488773348872899977988-75425999999999863997999301111310588887414
Q ss_pred --H--H---HCCCHHHHHHHHHHHCCCCCCCEEEC-C------------CHHHH-HHHHHCCCCCCCCHHHH---HHHHH
Q ss_conf --3--3---24520012023465233434531311-7------------88999-99973378778777789---99999
Q T0636 183 --L--A---YGENELVFRSFSKSYGLAGLRLGALF-G------------PSELI-AAMKRKQWFCNVGTLDL---HALEA 238 (336)
Q Consensus 183 --l--~---~~~n~iv~~S~SK~~gl~GlRiG~~i-~------------~~~~i-~~l~~~~~~~~~~~~~~---~aa~~ 238 (336)
. . ..+-.+++.|+.|+. +|+.-|-++ . +.+.+ +.+... .+.+-+.+.. .++..
T Consensus 334 ~~~~~d~~~~~~~d~vvqS~HKtL--~altQ~S~Lh~k~~~i~~~~~~~d~~r~~~a~~~~-~STSPsY~lmASLDva~~ 410 (730)
T 1c4k_A 334 PLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLF-MSTSPFYPMYAALDVNAA 410 (730)
T ss_dssp TTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHH-SCSSCCHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCEEEEECCCCC--CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCHHHHHHHHHHHH
T ss_conf 440022377666536997131025--55400068887376334411235789999987521-667876899999999999
Q ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCC--EE----------------------------ECC----------C
Q ss_conf 9745---999999999999999999999985897--86----------------------------169----------8
Q T0636 239 ALDN---DRAREAHIAKTLAQRRRVADALRGLGY--RV----------------------------ASS----------E 275 (336)
Q Consensus 239 ~l~~---~~~~~~~~~~~~~~r~~l~~~l~~lg~--~~----------------------------~~s----------~ 275 (336)
.+.. ...+++.++....-|+++ .+++. .. .|. .
T Consensus 411 ~~~~e~G~~l~~e~i~~a~~~R~~l----~~~~~~~~~~~~~~v~~~~~~~~~~e~~~~~~~~~~l~~g~~~~~f~~~~~ 486 (730)
T 1c4k_A 411 MQEGEAGRKLWHDLLITTIEARKKL----IKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGD 486 (730)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHH----HHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCEEEECCCCEECCCCCCCC
T ss_conf 9752456899999999999999999----855240014664324652002556877504653276458860114455576
Q ss_pred CCE------EEEEC--------------CCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHH
Q ss_conf 647------88656--------------9889999999876938960778888874788747---989999999999999
Q T0636 276 ANF------VLVEN--------------AAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEY 332 (336)
Q Consensus 276 ~~F------i~~~~--------------~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~---~~ee~~~l~~aL~~~ 332 (336)
+.| +++.. .++..+.++|.++||.+--++ .+.+++.++ |++++++|+++|.++
T Consensus 487 ~~~~~DP~Kl~l~t~gi~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d----~~~vl~l~s~g~t~~~~~~Lv~aL~~i 562 (730)
T 1c4k_A 487 NQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD----LNSILFLMTPAETPAKMNNLITQLLQL 562 (730)
T ss_dssp TCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC----SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHCCCEEEECC----CCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 5223478637999689676676324318768999999998799588668----982999966878999999999999999
Q ss_pred HH
Q ss_conf 84
Q T0636 333 SD 334 (336)
Q Consensus 333 ~e 334 (336)
.+
T Consensus 563 ~~ 564 (730)
T 1c4k_A 563 QR 564 (730)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 159
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridoxal phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.46 E-value=1.4e-10 Score=86.85 Aligned_cols=314 Identities=13% Similarity=0.151 Sum_probs=174.0
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHH-----CCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 66553573576--54888-76899999999987500-----588986189999999984888543886077889999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARIN-----RYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~-----~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
.+++.||+.++ -+.+| -.|.+.+|+.+.+.++. .|+.+...+|-+.+.+...-.-+.+..+++++|+...++
T Consensus 48 dG~~ylD~~~g~g~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~~~sGseA~e~Ai 127 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAV 127 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 89999985348987534799599999999999657875677558877999999776308876515762363367999999
Q ss_pred HHH---------CC-CCEEECCCCCHHHHH-HHHHHCC------------CEEEECCCCC---------CCCCH----HH
Q ss_conf 984---------69-925763887356999-9998188------------0364155435---------67788----99
Q T0636 85 AEF---------SS-MRFVTAWPGFDGYRA-RIAVSGL------------RHFEIGLTDD---------LLLDP----ND 128 (336)
Q Consensus 85 ~~~---------~~-~~vii~~P~y~~y~~-~~~~~g~------------~~~~vp~~~~---------~~~d~----~~ 128 (336)
+.. .+ ..|+...-+|-+... .....+. .+..+|.... ..... ..
T Consensus 128 klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (449)
T 3a8u_X 128 KMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADE 207 (449)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999987510567637999257878863331220578777666567788865555433334334544332037889999
Q ss_pred HHHH----CCHH-HHHHHCCC-CCCCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCCC----HHHHCCCHHHHH
Q ss_conf 9730----0024-31330366-33222223----79999999737872-025210025886620----033245200120
Q T0636 129 LAQV----SRDD-CVVLANPS-NPTGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRAR----GLAYGENELVFR 193 (336)
Q Consensus 129 l~~~----~~~~-~i~l~nPn-NPTG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~~----~l~~~~n~iv~~ 193 (336)
+.+. ...+ +.+|.-|= .-.|...+ .++|+++|++++.+ |+||+...|+..-.. .....|+++
T Consensus 208 ~~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~~~~~~gv~PDiv--- 284 (449)
T 3a8u_X 208 LLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--- 284 (449)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEECCCCCCCCCCCCHH---
T ss_conf 99999972788625999712457779813998999999999998399999823342346210025500379895154---
Q ss_pred HHHHHHCCCCCCCEEECCCHHHHHHHHHC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23465233434531311788999999733-----------7877877778999999974599999999999999999999
Q T0636 194 SFSKSYGLAGLRLGALFGPSELIAAMKRK-----------QWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVAD 262 (336)
Q Consensus 194 S~SK~~gl~GlRiG~~i~~~~~i~~l~~~-----------~~~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~ 262 (336)
+|+|..|-.+.-+|.+++.+++.+.+..- ..+|+-|.++..++.+.|+.-.. +...+++...-+++.+
T Consensus 285 ~~gK~l~gG~~p~a~~~~~~~i~~~~~~~~~~~~~~~~~h~~T~~gnpl~~aAa~atL~~l~~-~~~~~~~~~~g~~l~~ 363 (449)
T 3a8u_X 285 CIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK-ENLVQSVAEVAPHFEK 363 (449)
T ss_dssp EECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC-CCCHHHHHHHHHHHHH
T ss_conf 234331487364432235589998750377543245666565778986320024320111101-1200577889999999
Q ss_pred HHHHC----CCEEECCCCCEEEEECC--C------HHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHH
Q ss_conf 99858----97861698647886569--8------8999999987693896077888887478874---79899999999
Q T0636 263 ALRGL----GYRVASSEANFVLVENA--A------GERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLA 327 (336)
Q Consensus 263 ~l~~l----g~~~~~s~~~Fi~~~~~--~------~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~ 327 (336)
.|+++ ++.-....|.+.-+++. + ..+....|.++||+++++. +.||++- -+++|++++++
T Consensus 364 ~l~~l~~~~~V~~vrg~Glm~~i~~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~g-----n~i~~~PpL~~s~~did~~l~ 438 (449)
T 3a8u_X 364 ALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-----DTLQFGPTFNSKPQDLDRLFD 438 (449)
T ss_dssp HHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-----TEEEECCCTTCCHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCC-----CEEEEECCCCCCHHHHHHHHH
T ss_conf 999860589837860367199999955873699999999999998893881179-----989996985789999999999
Q ss_pred HHHHHHHC
Q ss_conf 99999842
Q T0636 328 ALAEYSDH 335 (336)
Q Consensus 328 aL~~~~e~ 335 (336)
++++.+++
T Consensus 439 ~l~~al~~ 446 (449)
T 3a8u_X 439 AVGEVLNK 446 (449)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 160
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyridoxal phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.46 E-value=1.2e-10 Score=87.22 Aligned_cols=317 Identities=15% Similarity=0.100 Sum_probs=173.3
Q ss_pred CCCCCEECCC--CCCCCC-CCHHHHHHHHHHHHHHHC-----CCCCCHHHHHHHHHHHHCC-CHHHEEEECCHHHHHHHH
Q ss_conf 6655357357--654888-768999999999875005-----8898618999999998488-854388607788999999
Q T0636 13 AAAQAVCLAF--NENPEA-VEPRVQAAIAAAAARINR-----YPFDAEPRVMRKLAEHFSC-PEDNLMLVRGIDECFDRI 83 (336)
Q Consensus 13 ~~~~~i~L~~--Nenp~~-p~~~v~~al~~~~~~~~~-----Ypd~~~~~Lr~aia~~~~v-~~d~I~~t~Gs~~~i~~~ 83 (336)
.+++.||+.. +-+.+| -.|.+.+|+++.+.++.. ++.+...+|-+.+.+.+.- ..++++.+++++|+....
T Consensus 54 dG~~ylD~~~g~~~~~lGh~hP~i~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGseAve~A 133 (452)
T 3dxv_A 54 NGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAA 133 (452)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH
T ss_conf 98999880221888985699789999999997420584468768889999999999867735789899859659999999
Q ss_pred HHH---HC-CCCEEECCCCCHHHHHHHHHH-C----------CCEEEECCCCCC---CCC------HHHHH----HHCCH
Q ss_conf 998---46-992576388735699999981-8----------803641554356---778------89997----30002
Q T0636 84 SAE---FS-SMRFVTAWPGFDGYRARIAVS-G----------LRHFEIGLTDDL---LLD------PNDLA----QVSRD 135 (336)
Q Consensus 84 ~~~---~~-~~~vii~~P~y~~y~~~~~~~-g----------~~~~~vp~~~~~---~~d------~~~l~----~~~~~ 135 (336)
++. +. ...|+..+-+|-+....+... + -.+..+|..+-+ ..+ .+.+. +....
T Consensus 134 lklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~ 213 (452)
T 3dxv_A 134 YRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAG 213 (452)
T ss_dssp HHHHHHHHSCCEEEEETTCCCCSSHHHHTTCC------------EEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 99999975899699963577887410244357876566667778322588987667788716899999999999723688
Q ss_pred H-HHHHHCCCCC-CCCCCC----HHHHHHHHHHCCCCC-CCCCCCCCCCCCC----CHHHHCCCHHHHHHHHHHHCCCCC
Q ss_conf 4-3133036633-222223----799999997378720-2521002588662----003324520012023465233434
Q T0636 136 D-CVVLANPSNP-TGQALS----AGELDQLRQRAGKLL-IDETYVDYSSFRA----RGLAYGENELVFRSFSKSYGLAGL 204 (336)
Q Consensus 136 ~-~i~l~nPnNP-TG~~~~----~~~l~~l~~~~~~~I-vDeaY~~f~~~~~----~~l~~~~n~iv~~S~SK~~gl~Gl 204 (336)
+ +.++..|=-- .|...+ .+.|.++|++++.++ +||+...|...-. ......|+++ +|+|..| .|+
T Consensus 214 ~iaAviiEPv~g~~G~~~p~~~~L~~l~~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDiv---~~gK~~~-gg~ 289 (452)
T 3dxv_A 214 SIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL---VLGKGLG-GGL 289 (452)
T ss_dssp CEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE---EECGGGG-TTS
T ss_pred CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEECCCCCCCEE---EECCCCC-CCC
T ss_conf 768999937457889537899999999999998094799546532477776832100069888778---7413466-777
Q ss_pred CCEEECCCHHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHH-HHHHHHHHHHHCCCE-EECCCCCEE
Q ss_conf 5313117889999997337-87787777899999997459--999999999999-999999999858978-616986478
Q T0636 205 RLGALFGPSELIAAMKRKQ-WFCNVGTLDLHALEAALDND--RAREAHIAKTLA-QRRRVADALRGLGYR-VASSEANFV 279 (336)
Q Consensus 205 RiG~~i~~~~~i~~l~~~~-~~~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~~-~r~~l~~~l~~lg~~-~~~s~~~Fi 279 (336)
-+|.+++.+++.+...... ..|+-|.++..++.+.|+.- +.+.++.+++-+ -++.|.+..++.++- -....|.++
T Consensus 290 Pi~av~~~~ei~~~~~~~~~~t~~g~p~~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~ 369 (452)
T 3dxv_A 290 PLSAVIAPAEILDCASAFAMQTLHGNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLAC 369 (452)
T ss_dssp CCEEEEEEHHHHTSCSSSSCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEE
T ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEE
T ss_conf 75122451887505676666767898699999999999998177799999999999999999997489868996113499
Q ss_pred EEEC--------CC---HHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHHHHC
Q ss_conf 8656--------98---8999999987693896077888887478874---7989999999999999842
Q T0636 280 LVEN--------AA---GERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 280 ~~~~--------~~---~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~~e~ 335 (336)
-+.+ ++ ...+...+.++|+++++... ..+.||+.. -|++|+++++++|++.+++
T Consensus 370 gie~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~ir~~Ppl~~t~~eid~~~~~l~~al~~ 437 (452)
T 3dxv_A 370 GMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLDRAFSE 437 (452)
T ss_dssp EEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999505665674489999999999978988832468--8999999698888999999999999999999
No 161
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.45 E-value=2e-10 Score=85.75 Aligned_cols=312 Identities=15% Similarity=0.115 Sum_probs=169.6
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 66553573576--54888-7689999999998750058-----8986189999999984888543886077889999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRY-----PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Y-----pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
.+++.||+.++ -+.+| -.|.+++|+++.+.++... +.+...+|-+.+.+...-+-+.++.+++++|+...++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseA~e~Al 131 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSAL 131 (476)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
T ss_conf 98999987630876662699599999999999755873678668889999999999857988586985087688999999
Q ss_pred HHH---------CCC-CEEECCCCCHHHHHHHH-HHCCC------------EEEECC--CC-CCCCC--------HHHHH
Q ss_conf 984---------699-25763887356999999-81880------------364155--43-56778--------89997
Q T0636 85 AEF---------SSM-RFVTAWPGFDGYRARIA-VSGLR------------HFEIGL--TD-DLLLD--------PNDLA 130 (336)
Q Consensus 85 ~~~---------~~~-~vii~~P~y~~y~~~~~-~~g~~------------~~~vp~--~~-~~~~d--------~~~l~ 130 (336)
+.- ++. .++...-+|-+...... ..+.. ...++. .. ..... .++++
T Consensus 132 klar~~~~~~g~~~~~~i~~~~~g~hG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 211 (476)
T 3i5t_A 132 RFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFE 211 (476)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99766788629975069999957987875300010366544345322222333445775223577761467888999999
Q ss_pred HH---CCHH--HHHHHCCC-CCCCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCC--CCHH---HHCCCHHHHHH
Q ss_conf 30---0024--31330366-33222223----79999999737872-0252100258866--2003---32452001202
Q T0636 131 QV---SRDD--CVVLANPS-NPTGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFR--ARGL---AYGENELVFRS 194 (336)
Q Consensus 131 ~~---~~~~--~i~l~nPn-NPTG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~--~~~l---~~~~n~iv~~S 194 (336)
.. ...+ +.++.-|= .-.|.+.. .+.+.++|++++++ |+||+...|+..- .... ...|+++ +
T Consensus 212 ~~i~~~~~~~iAavi~Epi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~~~~~~~gv~PDiv---~ 288 (476)
T 3i5t_A 212 DRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII---T 288 (476)
T ss_dssp HHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE---E
T ss_pred HHHHHCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHCCEEEECCCEECCCCCCCCCCHHHHCCCCCCEE---E
T ss_conf 9998549997699997762167854568899999999999997978885143112665778740343159898888---5
Q ss_pred HHHHHCCCC-CCCEEECCCHHHHHHHHHCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 346523343-45313117889999997337---------87787777899999997459999999999999999999999
Q T0636 195 FSKSYGLAG-LRLGALFGPSELIAAMKRKQ---------WFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADAL 264 (336)
Q Consensus 195 ~SK~~gl~G-lRiG~~i~~~~~i~~l~~~~---------~~~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l 264 (336)
+||..| .| .-+|.++..+++.+.+.... .+|+-|.++..++.+.|+.-+. +...+...+.-+++.+.|
T Consensus 289 ~gK~L~-~G~~p~~~~~~~~~v~~~~~~~~~~~~~~~~g~T~~gnpla~aaa~a~L~~i~~-~~~~~~~~~~g~~l~~~L 366 (476)
T 3i5t_A 289 FAKGVT-SGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER-EGIVDQAREMADYFAAAL 366 (476)
T ss_dssp ECGGGG-TTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred ECCCCC-CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_conf 211146-885630010113999965358775544355556889886999999999999997-137999999999999999
Q ss_pred HHC---CC-EEECCCCCEEEEEC--------CC------HHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHH
Q ss_conf 858---97-86169864788656--------98------8999999987693896077888887478874---7989999
Q T0636 265 RGL---GY-RVASSEANFVLVEN--------AA------GERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDND 323 (336)
Q Consensus 265 ~~l---g~-~~~~s~~~Fi~~~~--------~~------~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~ 323 (336)
+++ .. .-....|.++-+++ +. ...+.+.+.++||++++++ +.+|++- -|++|++
T Consensus 367 ~~L~~~~~i~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~l~~~~~~~Glli~~~G-----n~l~~~Ppl~it~~eid 441 (476)
T 3i5t_A 367 ASLRDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-----DLCVISPPLIISRAQID 441 (476)
T ss_dssp HTTTTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHH
T ss_pred HHHHCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC-----CEEEEECCCCCCHHHHH
T ss_conf 9871599746774266489999841455555552107999999999997892897549-----88999899578999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999984
Q T0636 324 RLLAALAEYSD 334 (336)
Q Consensus 324 ~l~~aL~~~~e 334 (336)
+++++|++..+
T Consensus 442 ~~~~~l~~al~ 452 (476)
T 3i5t_A 442 EMVAIMRQAIT 452 (476)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 162
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.subtilis ortholog; NP_348457.1; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.44 E-value=5.5e-11 Score=89.43 Aligned_cols=260 Identities=12% Similarity=0.098 Sum_probs=152.3
Q ss_pred HHHHHHHHH-HHH--H---HCC--CCCCHHHHHHHHHHHHCCCHHHEEE-ECCHHHHHHHHHHHH--CCCCEEEC-CCCC
Q ss_conf 999999999-875--0---058--8986189999999984888543886-077889999999984--69925763-8873
Q T0636 32 RVQAAIAAA-AAR--I---NRY--PFDAEPRVMRKLAEHFSCPEDNLML-VRGIDECFDRISAEF--SSMRFVTA-WPGF 99 (336)
Q Consensus 32 ~v~~al~~~-~~~--~---~~Y--pd~~~~~Lr~aia~~~~v~~d~I~~-t~Gs~~~i~~~~~~~--~~~~vii~-~P~y 99 (336)
.|++|++++ +.+ + ..| .+.|.+.|.+..|+.++...-.+.+ ++.++.|+..++.++ +||+++.. .+.|
T Consensus 48 kvl~Af~~~~~~~~~f~~~~GY~Y~r~Gnptle~l~A~l~g~E~Alv~~~f~SGtaAI~~aLlalLrPGDeIL~~~g~~Y 127 (427)
T 3hvy_A 48 KVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPY 127 (427)
T ss_dssp HHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCC
T ss_pred HHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 99999986151376548999988689999899999999856268703368658899999999997579998999148877
Q ss_pred HHHHHH-----------HHHHCCCEEEECCCCCCCCCHHHHHHHC--CHHHHHHHCCCCCCCC---CCCHHHHHH---HH
Q ss_conf 569999-----------9981880364155435677889997300--0243133036633222---223799999---99
Q T0636 100 DGYRAR-----------IAVSGLRHFEIGLTDDLLLDPNDLAQVS--RDDCVVLANPSNPTGQ---ALSAGELDQ---LR 160 (336)
Q Consensus 100 ~~y~~~-----------~~~~g~~~~~vp~~~~~~~d~~~l~~~~--~~~~i~l~nPnNPTG~---~~~~~~l~~---l~ 160 (336)
..+... +..+|+++..++.. |...|.+++++.. +++.+++..|+||.+. .++..+|.+ ++
T Consensus 128 dtl~~v~G~t~~~~~~~L~~~GI~~~~vd~~-d~~~d~~~i~~ai~~~tkt~lV~~e~~~~~~~~p~~~i~dI~~i~~~a 206 (427)
T 3hvy_A 128 DTLHDIIGMDDSKKVGSLREYGVKYKMVDLK-DGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSI 206 (427)
T ss_dssp GGGHHHHTCCTTCCSCCTGGGTCEEEECCCB-TTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHH
T ss_pred CCCEEEECHHHHHHHHHHHHCCEEEEECCCC-CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 5420230456677763688709177745988-734439999986165677499995788877778637799999999999
Q ss_pred HHC--C-CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCC-CEEECCCHHHHHHHHHCCCCCCCC--HHHHH
Q ss_conf 737--8-72025210025886620033245200120234652334345-313117889999997337877877--77899
Q T0636 161 QRA--G-KLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLR-LGALFGPSELIAAMKRKQWFCNVG--TLDLH 234 (336)
Q Consensus 161 ~~~--~-~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlR-iG~~i~~~~~i~~l~~~~~~~~~~--~~~~~ 234 (336)
+.+ + ++++|..|..+..... ++...-+ +|++|++|..|-.|-. -|+++++++++++.+.+...-++. ..+-.
T Consensus 207 k~~~~~viv~vDNt~~~p~~~~e-Pl~~GAD-iV~~SltK~lgGh~d~~GG~IvG~kelIe~~~~rl~~~G~g~~~g~~~ 284 (427)
T 3hvy_A 207 REVNENVIVFVDNCYGEFVEEKE-PTDVGAD-IIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTF 284 (427)
T ss_dssp HHHCSSSEEEEECTTCTTTSSSC-GGGGTCS-EEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCT
T ss_pred HHHCCCCEEEEECCCCCHHHCCC-CHHHCCC-EEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 98568988997167654110468-6220795-899973104788877647999828999999999974898677862489
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCEEECCCC-C----EEEEECCCHHHHHHHHH
Q ss_conf 999997459999-999999999999999999858978616986-4----78865698899999998
Q T0636 235 ALEAALDNDRAR-EAHIAKTLAQRRRVADALRGLGYRVASSEA-N----FVLVENAAGERTLRFLR 294 (336)
Q Consensus 235 aa~~~l~~~~~~-~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~-~----Fi~~~~~~~~~~~~~L~ 294 (336)
.....+....++ +.....-.+...++.+.|+++|+++.|... . .--+++.+.+.+..+++
T Consensus 285 ~~lRgl~tl~~r~~~~~~nA~k~A~flA~~~e~~g~~v~P~~~~~r~d~iq~~~~~~~~~~~~f~~ 350 (427)
T 3hvy_A 285 GVMRSLYEGLFMAPHVTIEAVKGAVFCARIMELAGFDVLPKYNDKRTDIIQAIKFNDEKKLIDFIK 350 (427)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 998787552644899999999999999999997598148999998650589886799799999999
No 163
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal- kingston bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori 26695} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.44 E-value=1.6e-10 Score=86.40 Aligned_cols=294 Identities=14% Similarity=0.131 Sum_probs=177.8
Q ss_pred CHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCC--CEEECCCCCHHHH
Q ss_conf 689999999998750058898-6189999999984888543886077889999999984---699--2576388735699
Q T0636 30 EPRVQAAIAAAAARINRYPFD-AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSM--RFVTAWPGFDGYR 103 (336)
Q Consensus 30 ~~~v~~al~~~~~~~~~Ypd~-~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~--~vii~~P~y~~y~ 103 (336)
...-++++.+.+.. ..+... .-.++.+.+|+++|. ...+.++.++.|+.++++++ +|| +|+++.=+|..-.
T Consensus 12 ~~~~~~~v~~~l~~-~~~~~G~~v~~fE~~~a~~~g~--~~ai~~~Sgt~Al~~al~~l~~~~~~~~eVi~p~~t~~a~~ 88 (375)
T 2fnu_A 12 DKEDKKAVLEVLNS-KQLTQGKRSLLFEEALCEFLGV--KHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATA 88 (375)
T ss_dssp CHHHHHHHHHHHTS-SCCSSSHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHH
T ss_pred CHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
T ss_conf 99999999999808-9867897799999999999780--95999737899999999984787899886982597337527
Q ss_pred HHHHHHCCCEEEECCCCCCCCCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCC
Q ss_conf 99998188036415543567788999730--002431330366332222237999999973787202-521002588662
Q T0636 104 ARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLI-DETYVDYSSFRA 180 (336)
Q Consensus 104 ~~~~~~g~~~~~vp~~~~~~~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~Iv-DeaY~~f~~~~~ 180 (336)
..+...|..++.+..+++...+.++++.. .+++++++. +.-|...+.+++.++++++++.|| |.+-.-.+...-
T Consensus 89 ~ai~~~G~~pvfvDid~~~~~~~~~~~~~~~~~tkaii~v---h~~G~~~d~~~i~~~~~~~~i~vIEDaa~a~Ga~~~~ 165 (375)
T 2fnu_A 89 NMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSV---DYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQN 165 (375)
T ss_dssp HHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEE---CGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETT
T ss_pred HHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEE---CCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCEECC
T ss_conf 9998579989996523335589899998648887399993---5755555678999998751531202534436963313
Q ss_pred CHHHHCCCHHHHHHH--HHHHCCCCCCCEEECC-CHHHHHHHHHCCCCC------------------CCCHHHHHHHHHH
Q ss_conf 003324520012023--4652334345313117-889999997337877------------------8777789999999
Q T0636 181 RGLAYGENELVFRSF--SKSYGLAGLRLGALFG-PSELIAAMKRKQWFC------------------NVGTLDLHALEAA 239 (336)
Q Consensus 181 ~~l~~~~n~iv~~S~--SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~~~------------------~~~~~~~~aa~~~ 239 (336)
..+..... +.+.|| +|..+. |- =|.++. ++++.+.++..+... -++.+....+...
T Consensus 166 ~~~G~~gd-~~~fSf~~~K~l~~-ge-GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~~el~Aai~~~q 242 (375)
T 2fnu_A 166 KKVGGFAL-ASVFSFHAIKPITT-AE-GGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQ 242 (375)
T ss_dssp EETTSSSS-EEEEECCTTSSSCC-SS-CEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHH
T ss_pred CCCCCCCC-CCEECCCCCCEECC-CC-CCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHH
T ss_conf 00766644-42212466600024-55-51377189999987768877355777665445333564101424678899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-EEE-CC---CCC---E-EEEECC---CHHHHHHHHHHCCCEEEECCCC-
Q ss_conf 745999999999999999999999985897-861-69---864---7-886569---8899999998769389607788-
Q T0636 240 LDNDRAREAHIAKTLAQRRRVADALRGLGY-RVA-SS---EAN---F-VLVENA---AGERTLRFLRERGIQVKDAGQF- 306 (336)
Q Consensus 240 l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~-~~~-~s---~~~---F-i~~~~~---~~~~~~~~L~~~gi~vr~~~~f- 306 (336)
|+.- .+.+++-++..++..+.|++++. ... +. +.+ | ++++.. .-+.+.+.|.++||-++....+
T Consensus 243 L~~l---~~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~y~pl 319 (375)
T 2fnu_A 243 LKKA---PFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPI 319 (375)
T ss_dssp HTTH---HHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCG
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCC
T ss_conf 8764---7999999999999998751288713466543334444058999932430448999999998799851446662
Q ss_pred -------------CCC-------CEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf -------------888-------74788747---989999999999999842
Q T0636 307 -------------GLH-------HHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 307 -------------g~~-------~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
.++ +.+.+-+. +.+|+++.++.++++.++
T Consensus 320 ~~~~~~~~~~~~~~~p~ae~l~~~~l~LP~~~~lt~~di~~I~~~I~~~~~~ 371 (375)
T 2fnu_A 320 YQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFES 371 (375)
T ss_dssp GGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 1189888416668998999998494989789998999999999999999998
No 164
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus HB8}
Probab=99.44 E-value=2.6e-11 Score=91.57 Aligned_cols=309 Identities=17% Similarity=0.172 Sum_probs=173.2
Q ss_pred CCCCCEECCCCC--CCCC-CCHHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHH--
Q ss_conf 665535735765--4888-768999999999875005--889861899999999848885438860778899999999--
Q T0636 13 AAAQAVCLAFNE--NPEA-VEPRVQAAIAAAAARINR--YPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISA-- 85 (336)
Q Consensus 13 ~~~~~i~L~~Ne--np~~-p~~~v~~al~~~~~~~~~--Ypd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~-- 85 (336)
.+++.+|+.++- +.+| -.|.+.+|+++.++.... ++.....+|-+.+++..+ ..+.++.+++++||...+++
T Consensus 50 dG~~ylD~~sg~~~~~lGh~~p~i~~ai~~ql~~~~~~~~~~~~~~~lae~l~~~~~-~~~~v~f~~SGseAvE~AiKlA 128 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATMSALRLA 128 (424)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC-CCCEEEECCCHHHHHHHHHHHH
T ss_conf 889999857088977107896999999999986326566640278999999997589-9897986396399999999999
Q ss_pred -HHCC-CCEEECCCCCHHHHHH-HHHHCCCEE--EE------CC-------CCCCCCCHHHHHHHCC---HH-HHHHHCC
Q ss_conf -8469-9257638873569999-998188036--41------55-------4356778899973000---24-3133036
Q T0636 86 -EFSS-MRFVTAWPGFDGYRAR-IAVSGLRHF--EI------GL-------TDDLLLDPNDLAQVSR---DD-CVVLANP 143 (336)
Q Consensus 86 -~~~~-~~vii~~P~y~~y~~~-~~~~g~~~~--~v------p~-------~~~~~~d~~~l~~~~~---~~-~i~l~nP 143 (336)
.+.+ ..|+...-+|-+.... ....|.... .+ |. ..++ -|++++++..+ .+ +.++.-|
T Consensus 129 r~~t~r~~ii~~~~~yHG~t~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~iaaii~Ep 207 (424)
T 2e7u_A 129 RGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-NDPEGLREVLKRRGEEIAAIIFEP 207 (424)
T ss_dssp HHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-TCHHHHHHHHHHHGGGEEEEEECS
T ss_pred HHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 7554779799996871788646777378864446899878998654565656576-899999999973799679999974
Q ss_pred CCC-CCCCCCHHH---HHHHHHHCCCC-CCCCCCCCCCCCCCCHHH---HCCCHHHHHHHHHHHCCCCCCCEEECCCHHH
Q ss_conf 633-222223799---99999737872-025210025886620033---2452001202346523343453131178899
Q T0636 144 SNP-TGQALSAGE---LDQLRQRAGKL-LIDETYVDYSSFRARGLA---YGENELVFRSFSKSYGLAGLRLGALFGPSEL 215 (336)
Q Consensus 144 nNP-TG~~~~~~~---l~~l~~~~~~~-IvDeaY~~f~~~~~~~l~---~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~ 215 (336)
--- .|...+.+. +.+++++++++ |+||++..|....-.... ..|+++ ++||.+| .|+-+|.+++.+++
T Consensus 208 v~g~gg~~~~~~~~~~~~~~c~~~gillI~DEv~tG~gr~~~~a~e~~gv~PDiv---~~gK~l~-gG~~~~av~~~~ei 283 (424)
T 2e7u_A 208 VVGNAGVLVPTEDFLKALHEAKAYGVLLIADEVMTGFRLAFGGATELLGLKPDLV---TLGKILG-GGLPAAAYAGRREI 283 (424)
T ss_dssp SBCTTSCBCCCHHHHHHHHHGGGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE---EECGGGG-TTSSCEEEEECHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHCCCCCEE---EEEHHHH-CCCCCEEEEEHHHH
T ss_conf 7888896368778988888764068699996586554301565346539998599---9703774-98310898896999
Q ss_pred HHHHHHCC-----CCCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHHHHHHHHHCCC--EEECCCCCEEEEECC
Q ss_conf 99997337-----87787777899999997459---9999999999999-9999999985897--861698647886569
Q T0636 216 IAAMKRKQ-----WFCNVGTLDLHALEAALDND---RAREAHIAKTLAQ-RRRVADALRGLGY--RVASSEANFVLVENA 284 (336)
Q Consensus 216 i~~l~~~~-----~~~~~~~~~~~aa~~~l~~~---~~~~~~~~~~~~~-r~~l~~~l~~lg~--~~~~s~~~Fi~~~~~ 284 (336)
++.+.... .+|+-|.++..++.+.|+-- +.+.+..++.-.. +..+.+.+++.++ .+ ...|.++-+.+.
T Consensus 284 ~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~~~e~~~l~~~~~~~g~~~~~~l~~~~~~~~~v~~V-rG~Glm~~~e~~ 362 (424)
T 2e7u_A 284 MEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTV-NRVGSMITVFFT 362 (424)
T ss_dssp HTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESS
T ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE-EEECCEEEEEEE
T ss_conf 9876226987645788878413689999999999574378999999999999999999768998799-606738999982
Q ss_pred -------------CH---HHHHHHHHHCCCEEEECCCCCCCCEEEEEEC-CHHHHHHHHHHHHHH
Q ss_conf -------------88---9999999876938960778888874788747-989999999999999
Q T0636 285 -------------AG---ERTLRFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEY 332 (336)
Q Consensus 285 -------------~~---~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~-~~ee~~~l~~aL~~~ 332 (336)
+. ..++..|.++||+++|.. ...+++++. |++|+++++++|++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gv~~~p~~----~~~~~~~l~it~~eid~~~~~l~~a 423 (424)
T 2e7u_A 363 EGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSN----FEAAFLSVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp SSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSS----SSCEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHCCHHHHHHHHHHHHHHCCEEECCCC----CEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 687778787721419999999999997892867889----7359747878199999999999976
No 165
>3gju_A Putative aminotransferase; NP_107505.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti MAFF303099} PDB: 3fcr_A*
Probab=99.44 E-value=9e-10 Score=81.57 Aligned_cols=314 Identities=13% Similarity=0.152 Sum_probs=170.9
Q ss_pred CCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCC------CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 6553573576--54888-7689999999998750058------8986189999999984888543886077889999999
Q T0636 14 AAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRY------PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 14 ~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Y------pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
+++.||+.++ -+.+| -.|.+.+|+.+.+.++..+ +.+....+.+.+.+...-..+.+..+++++|+...++
T Consensus 50 G~~ylD~~~g~g~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~~a~~l~~~~p~~~~~v~f~~SGseA~e~Ai 129 (460)
T 3gju_A 50 GRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNI 129 (460)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHH
T ss_pred CCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCEEEECCCHHHHHHHHH
T ss_conf 79999857388854567898899999999996478601566656799999999865308630053785266078999999
Q ss_pred HH---H------CC-CCEEECCCCCHHHHH-HHHHHCC------------CE--EEECCC---CCCCCCHH--------H
Q ss_conf 98---4------69-925763887356999-9998188------------03--641554---35677889--------9
Q T0636 85 AE---F------SS-MRFVTAWPGFDGYRA-RIAVSGL------------RH--FEIGLT---DDLLLDPN--------D 128 (336)
Q Consensus 85 ~~---~------~~-~~vii~~P~y~~y~~-~~~~~g~------------~~--~~vp~~---~~~~~d~~--------~ 128 (336)
+. + ++ ..++....+|-+... .....+. .. ...|.. .+.....+ .
T Consensus 130 k~Ar~~~~~~g~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 209 (460)
T 3gju_A 130 KLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADK 209 (460)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999888509998628999808723885200121566223456565554455567885445676666888999999999
Q ss_pred HHHH---CC-HH-HHHHHCCCCCC-CCCCCH----HHHHHHHHHCCCCC-CCCCCCCCCCCCCC----HHHHCCCHHHHH
Q ss_conf 9730---00-24-31330366332-222237----99999997378720-25210025886620----033245200120
Q T0636 129 LAQV---SR-DD-CVVLANPSNPT-GQALSA----GELDQLRQRAGKLL-IDETYVDYSSFRAR----GLAYGENELVFR 193 (336)
Q Consensus 129 l~~~---~~-~~-~i~l~nPnNPT-G~~~~~----~~l~~l~~~~~~~I-vDeaY~~f~~~~~~----~l~~~~n~iv~~ 193 (336)
+++. .. .+ +.+|..|---. |.+.+. +.|.+++++++.++ +||+...|+..-.. .....|+++
T Consensus 210 l~~~i~~~~~~~iAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~a~~~~gv~PDi~--- 286 (460)
T 3gju_A 210 LEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI--- 286 (460)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE---
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCEEECCCCCCCCCCHHHCCCCCCCE---
T ss_conf 99999970999779999857668889845999999999999998098887411064554146855532249875413---
Q ss_pred HHHHHHCCCCCCC-EEECCCHHHHHHHHH---------CCCCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHH-HHHHH
Q ss_conf 2346523343453-131178899999973---------3787787777899999997459--999999999999-99999
Q T0636 194 SFSKSYGLAGLRL-GALFGPSELIAAMKR---------KQWFCNVGTLDLHALEAALDND--RAREAHIAKTLA-QRRRV 260 (336)
Q Consensus 194 S~SK~~gl~GlRi-G~~i~~~~~i~~l~~---------~~~~~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~~-~r~~l 260 (336)
+++|..| .|.-. |.++..+++.+.+.. ...+|+-|.++..++.+.|+.- +.+.++++++-+ -++.|
T Consensus 287 ~~gK~l~-gG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L 365 (460)
T 3gju_A 287 TIAKGLT-SAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAEL 365 (460)
T ss_dssp EECGGGT-TTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 3046455-356763210206999975347875456650234789972424457888664100129999999999999999
Q ss_pred HHHHHHCCCEE-ECCCCCEEEEECC--------------CHHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHH
Q ss_conf 99998589786-1698647886569--------------88999999987693896077888887478874---798999
Q T0636 261 ADALRGLGYRV-ASSEANFVLVENA--------------AGERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDN 322 (336)
Q Consensus 261 ~~~l~~lg~~~-~~s~~~Fi~~~~~--------------~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~ 322 (336)
.+.+++.++.. ....|.++-+++. .+..+...+.++||+++++.. .+.+|++- -|++++
T Consensus 366 ~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~---gn~i~~~PpL~it~~~i 442 (460)
T 3gju_A 366 AKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQ---GDILGFAPPLCLTREQA 442 (460)
T ss_dssp HHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSS---SCEEEECCCTTCCHHHH
T ss_pred HHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCC---CCEEEEECCCCCCHHHH
T ss_conf 999854998578741137999999427654444434589999999999978988942689---98899979958989999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999984
Q T0636 323 DRLLAALAEYSD 334 (336)
Q Consensus 323 ~~l~~aL~~~~e 334 (336)
+.+++.+.+..+
T Consensus 443 d~~i~~l~~al~ 454 (460)
T 3gju_A 443 DIVVSKTADAVK 454 (460)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 166
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix K1} PDB: 2zsl_A* 2zsm_A*
Probab=99.43 E-value=2.9e-11 Score=91.23 Aligned_cols=313 Identities=16% Similarity=0.170 Sum_probs=166.0
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCCCCCC-H-HHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHH--
Q ss_conf 66553573576--54888-76899999999987500588986-1-899999999848885438860778899999999--
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRYPFDA-E-PRVMRKLAEHFSCPEDNLMLVRGIDECFDRISA-- 85 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Ypd~~-~-~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~-- 85 (336)
.+++.+|+.++ -+.+| -.|.+.+|+.+.++....+.... . ..+.+.+..... ..+.+..+++.+++...++.
T Consensus 54 dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~f~~sGseAve~AiklA 132 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATMTAIRLA 132 (434)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC-CCCEEEECCCCHHHHHHHHHHH
T ss_conf 999999867418866417896999999999985456767863689999997540368-6443774276438999999999
Q ss_pred -HHCCC-CEEECCCCCHHHHHHHH-HHCCCE--EEECCCC------------CCCCCHHHHHHHC---CHH-HHHHHCCC
Q ss_conf -84699-25763887356999999-818803--6415543------------5677889997300---024-31330366
Q T0636 86 -EFSSM-RFVTAWPGFDGYRARIA-VSGLRH--FEIGLTD------------DLLLDPNDLAQVS---RDD-CVVLANPS 144 (336)
Q Consensus 86 -~~~~~-~vii~~P~y~~y~~~~~-~~g~~~--~~vp~~~------------~~~~d~~~l~~~~---~~~-~i~l~nPn 144 (336)
.+.+. .|+...-+|-+....+. ..+-.. ...|... ...-|.+++++.. ..+ +.++..|=
T Consensus 133 r~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~iAavI~EPi 212 (434)
T 2epj_A 133 RGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPV 212 (434)
T ss_dssp HHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSS
T ss_pred HHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf 86308977999957778741446531575433468998778776666764056734199999999867998689999503
Q ss_pred CC-CCCCCC----HHHHHHHHHHCCCC-CCCCCCCCCCCCCCCH---HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHH
Q ss_conf 33-222223----79999999737872-0252100258866200---332452001202346523343453131178899
Q T0636 145 NP-TGQALS----AGELDQLRQRAGKL-LIDETYVDYSSFRARG---LAYGENELVFRSFSKSYGLAGLRLGALFGPSEL 215 (336)
Q Consensus 145 NP-TG~~~~----~~~l~~l~~~~~~~-IvDeaY~~f~~~~~~~---l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~ 215 (336)
-- .|...+ .+.|.++|++++.+ |+||+...|....--. ....|+++ +++|..| .|.-+|.+++.+++
T Consensus 213 ~g~~G~~~p~~~yl~~l~~lc~~~gillI~DEV~tG~r~G~~~~~~~~gv~PDiv---~~gK~l~-gG~p~~a~~~~~~i 288 (434)
T 2epj_A 213 IANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGDII---VLGKIIG-GGFPVGAVAGSREV 288 (434)
T ss_dssp BCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCSEE---EEEGGGG-TTSSCEEEEECHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCCCHHHHCCCCCHH---HHHHHCC-CCCCCEEEEECHHH
T ss_conf 0368952689899999999999869889986554574003687624309886475---6535326-99751214551999
Q ss_pred HHHHHHCC-----CCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHH-HHHHHHHHHHHHCCCE--EECCCC--CEEE-EE
Q ss_conf 99997337-----87787777899999997459--99999999999-9999999999858978--616986--4788-65
Q T0636 216 IAAMKRKQ-----WFCNVGTLDLHALEAALDND--RAREAHIAKTL-AQRRRVADALRGLGYR--VASSEA--NFVL-VE 282 (336)
Q Consensus 216 i~~l~~~~-----~~~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~-~~r~~l~~~l~~lg~~--~~~s~~--~Fi~-~~ 282 (336)
.+.+..-. .+|+-|.++..++.+.|+-- +.+.+++++.- .-++.|.+.+++.++. +..-.+ .++| ++
T Consensus 289 ~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~~~~~~~gl~~~~e 368 (434)
T 2epj_A 289 MSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVE 368 (434)
T ss_dssp HTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCS
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEE
T ss_conf 98618788764235789984114778999999867189999999999999999999977699975702477257999766
Q ss_pred CC---------C---HHHHHHHHHHCCCEEEECCCCCCCCEEEEEE-CCHHHHHHHHHHHHHHHH
Q ss_conf 69---------8---8999999987693896077888887478874-798999999999999984
Q T0636 283 NA---------A---GERTLRFLRERGIQVKDAGQFGLHHHIRISI-GREEDNDRLLAALAEYSD 334 (336)
Q Consensus 283 ~~---------~---~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~-~~~ee~~~l~~aL~~~~e 334 (336)
.. + ...+++.|.++||+++|+.. ..++.+. -|++|++.+++++++..+
T Consensus 369 ~v~~~~~~~~~d~~~~~~~~~~~~~~Gv~l~p~~~----~~~~p~l~~t~~~id~~~~~~~~~l~ 429 (434)
T 2epj_A 369 EVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL----EAVFTGLPHQGEALEIAVEGLRSSLK 429 (434)
T ss_dssp CCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCSHHHHHHHHHHHHHHHH
T ss_pred ECCCHHHHCCCCHHHHHHHHHHHHHCCEEECCCCC----EEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 23786771357799999999999979968878998----78974688889999999999999999
No 167
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.42 E-value=2.1e-10 Score=85.66 Aligned_cols=321 Identities=16% Similarity=0.185 Sum_probs=195.7
Q ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH--HHCCCCC------CHHHHHHHHH-----HHHCCCHH-
Q ss_conf 11578975036655357357654888768999999999875--0058898------6189999999-----98488854-
Q T0636 3 VGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPFD------AEPRVMRKLA-----EHFSCPED- 68 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~i~L~~Nenp~~p~~~v~~al~~~~~~--~~~Ypd~------~~~~Lr~aia-----~~~~v~~d- 68 (336)
|.+.++++...-..-|.|--.||- +||.|++++...+.. .-.||.. .+..-.|.+| +.++.+++
T Consensus 32 i~~~i~~E~~rq~~~l~LiaSEN~--~S~~v~~al~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~ 109 (483)
T 1rv3_A 32 VYDIIKKESNRQRVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQC 109 (483)
T ss_dssp HHHHHHHHHHHHHSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTT
T ss_pred HHHHHHHHHHHHHCCCEEECCCCC--CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999759668646776--799999985672127555789997465776069999999999999984887334
Q ss_pred ---HEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHH----------HHHHCCCEEEECCCCC-CCCCHHHHHHH
Q ss_conf ---3886077889999999984--699257638873569999----------9981880364155435-67788999730
Q T0636 69 ---NLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRAR----------IAVSGLRHFEIGLTDD-LLLDPNDLAQV 132 (336)
Q Consensus 69 ---~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~----------~~~~g~~~~~vp~~~~-~~~d~~~l~~~ 132 (336)
+|-.-+|++..+. ++.++ +||+|+.+...-.++... +.-...+...++.+.+ +.+|.+++++.
T Consensus 110 ~~anVqp~SGs~An~a-v~~all~pgD~im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~IDyd~l~~~ 188 (483)
T 1rv3_A 110 WGVNVQPYSGSPANFA-VYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEEN 188 (483)
T ss_dssp EEEECCCSSHHHHHHH-HHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHH
T ss_pred CEEEECCCCCHHHHHH-HHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHH
T ss_conf 7125368862888899-888604899877531523355544565456777641242577668987512576449999999
Q ss_pred ---CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCCC-CC--CCCCCCHHHHCCCHHHHHHHHHHHCCCCCC
Q ss_conf ---0024313303663322222379999999737872-0252100-25--886620033245200120234652334345
Q T0636 133 ---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKL-LIDETYV-DY--SSFRARGLAYGENELVFRSFSKSYGLAGLR 205 (336)
Q Consensus 133 ---~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~-IvDeaY~-~f--~~~~~~~l~~~~n~iv~~S~SK~~gl~GlR 205 (336)
.++++|++.-=.+| ..++-+++.++++..+.+ ++|-+.. .+ ++....++... + ||..|.-|++ +|=|
T Consensus 189 a~~~kPklIi~G~S~y~--r~~d~~~~reIad~vga~l~~D~sHiaGLIagg~~~sPl~~a-D-vvt~sTHKTl--rGPr 262 (483)
T 1rv3_A 189 ARLFHPKLIIAGTSCYS--RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHC-H-VVTTTTHKTL--RGCR 262 (483)
T ss_dssp HHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTC-S-EEEEESSGGG--CCCS
T ss_pred HHHHCCCEEEECHHHCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCHHHHE-E-EEEEECCCCC--CCCC
T ss_conf 87406654883134412--546779998878644975970220013321045569856621-1-3431204212--5777
Q ss_pred CEEECCCH---------------HHHHHHHHCCCCCCCCH--HHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 31311788---------------99999973378778777--78999999-9745--99999999999999999999998
Q T0636 206 LGALFGPS---------------ELIAAMKRKQWFCNVGT--LDLHALEA-ALDN--DRAREAHIAKTLAQRRRVADALR 265 (336)
Q Consensus 206 iG~~i~~~---------------~~i~~l~~~~~~~~~~~--~~~~aa~~-~l~~--~~~~~~~~~~~~~~r~~l~~~l~ 265 (336)
=|.+...+ ++.+.+.+..-|...+. +...++++ ++.. ...+.++.+++..+.+.|.+.|.
T Consensus 263 gGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~iaa~Aval~ea~~~efk~Ya~qvv~NAk~LA~~L~ 342 (483)
T 1rv3_A 263 AGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALV 342 (483)
T ss_dssp CEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 33899704423355011004679999998644386643220056789999999997086889999999999999999999
Q ss_pred HCCCEEECCCC--CEEEEECC----CHHHHHHHHHHCCCEEE----ECCCCC-CCCEEEEEE------C-CHHHHHHHHH
Q ss_conf 58978616986--47886569----88999999987693896----077888-887478874------7-9899999999
Q T0636 266 GLGYRVASSEA--NFVLVENA----AGERTLRFLRERGIQVK----DAGQFG-LHHHIRISI------G-REEDNDRLLA 327 (336)
Q Consensus 266 ~lg~~~~~s~~--~Fi~~~~~----~~~~~~~~L~~~gi~vr----~~~~fg-~~~~iRis~------~-~~ee~~~l~~ 327 (336)
+.|+++...++ ..+|+++. ++..+.+.|.+.||.+. |++... .+..|||.. | .++||+++.+
T Consensus 343 ~~G~~v~~GgTdnHlvlvdl~~~g~~g~~a~~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~dm~~iA~ 422 (483)
T 1rv3_A 343 ELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAH 422 (483)
T ss_dssp HTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHH
T ss_pred HCCCEEECCCCCCCEEEEEEHHCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEECCHHHHHCCCCHHHHHHHHH
T ss_conf 68967526988766378752211887999999999829577878578999999998048667899858998899999999
Q ss_pred HHHHH
Q ss_conf 99999
Q T0636 328 ALAEY 332 (336)
Q Consensus 328 aL~~~ 332 (336)
.+.+.
T Consensus 423 ~I~~~ 427 (483)
T 1rv3_A 423 FIHRG 427 (483)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 168
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.41 E-value=1.1e-10 Score=87.56 Aligned_cols=270 Identities=17% Similarity=0.189 Sum_probs=158.7
Q ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-CCCCEEECCCCCHHHHHHHH----HHCCCEEEECCCCCCC
Q ss_conf 986189999999984888543886077889999999984-69925763887356999999----8188036415543567
Q T0636 49 FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRARIA----VSGLRHFEIGLTDDLL 123 (336)
Q Consensus 49 d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-~~~~vii~~P~y~~y~~~~~----~~g~~~~~vp~~~~~~ 123 (336)
.|....|.+++|+..|- +.-++++++..+|..++..+ .||++++....|.+....++ .+|+.+..+..
T Consensus 54 nPT~~~lE~~la~LEg~--~~a~~~sSGmAAi~~~l~~l~~gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~~~----- 126 (393)
T 1n8p_A 54 NPNRENLERAVAALENA--QYGLAFSSGSATTATILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTND----- 126 (393)
T ss_dssp CHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESS-----
T ss_pred CHHHHHHHHHHHHHHCC--CEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEC-----
T ss_conf 87899999999998399--62775377678999997325899979997045565213444444117449999835-----
Q ss_pred CCHHHHHHH--CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHC-----CCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH
Q ss_conf 788999730--0024313303663322222379999999737-----872025210025886620033245200120234
Q T0636 124 LDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRA-----GKLLIDETYVDYSSFRARGLAYGENELVFRSFS 196 (336)
Q Consensus 124 ~d~~~l~~~--~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~-----~~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~S 196 (336)
+.+++++. .++++||+=+|.|||..+.+.+.+.++++++ ..+|||..++. +.-..++...-+ ||+.|.|
T Consensus 127 -~~~~~~~~i~~~tkli~~EspsNP~l~v~Di~~ia~~a~~~~~~~~i~lvVDNT~at--P~~~~Pl~~GaD-iVvhS~T 202 (393)
T 1n8p_A 127 -LLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLS--PYISNPLNFGAD-IVVHSAT 202 (393)
T ss_dssp -HHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTH--HHHCCGGGGTCS-EEEEETT
T ss_pred -CHHHHHHHHCCCCEEEEECCCCCCCCEECCHHHHHHHHHHCCCCCCCEEEEECCCCC--CCCCCCCCCCCC-EEEEECC
T ss_conf -868999873778608992168995444233466565543112357846999565446--145874212898-9997155
Q ss_pred HHHCC-CCCCCEEEC-CCHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-C-
Q ss_conf 65233-434531311-7889999997337877--87777899999997459999999999999999999999858-9-7-
Q T0636 197 KSYGL-AGLRLGALF-GPSELIAAMKRKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-G-Y- 269 (336)
Q Consensus 197 K~~gl-~GlRiG~~i-~~~~~i~~l~~~~~~~--~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g-~- 269 (336)
|.++- ..+=.|.++ .++++.+.++..+..+ .++.........-|+. +..++++..++...+.+.|+.. . +
T Consensus 203 Kyi~GhsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~T---l~lR~~~~~~nA~~lA~~L~~~~~~V~ 279 (393)
T 1n8p_A 203 KYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT---LHLRVRQAALSANKIAEFLAADKENVV 279 (393)
T ss_dssp TTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTSCTTTEE
T ss_pred CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 10168886426422056477999999998743787997999999736870---568999999999999999985678668
Q ss_pred EE-ECC------------------CCCEEEEECC-CHHHHHHHHHHCCCE------------E-EECC------------
Q ss_conf 86-169------------------8647886569-889999999876938------------9-6077------------
Q T0636 270 RV-ASS------------------EANFVLVENA-AGERTLRFLRERGIQ------------V-KDAG------------ 304 (336)
Q Consensus 270 ~~-~~s------------------~~~Fi~~~~~-~~~~~~~~L~~~gi~------------v-r~~~------------ 304 (336)
+| ||+ .|..+-+.+. +.+...+++..-.++ + -|..
T Consensus 280 ~V~yP~l~~~~~~~~a~~~~~~~~~G~~~sf~l~~~~~~~~~f~~~l~l~~~a~SlG~~~SLi~~p~~~th~~~~~~~r~ 359 (393)
T 1n8p_A 280 AVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEARE 359 (393)
T ss_dssp EEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTT
T ss_pred EEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCEECCCCCCCCCEEECCHHHCCCCCCHHHHH
T ss_conf 99335777880089998754688877248999959999999999718814455065775714857412155238999999
Q ss_pred CCCC-CCEEEEEECCH--HH-HHHHHHHHHHH
Q ss_conf 8888-87478874798--99-99999999999
Q T0636 305 QFGL-HHHIRISIGRE--ED-NDRLLAALAEY 332 (336)
Q Consensus 305 ~fg~-~~~iRis~~~~--ee-~~~l~~aL~~~ 332 (336)
..|. ++.||||+|.+ ++ .+.|.+||++-
T Consensus 360 ~~Gi~~~liRlSVGlE~~~DLi~Dl~~AL~~a 391 (393)
T 1n8p_A 360 ASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp TTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 65989496999864289999999999999996
No 169
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.40 E-value=4.3e-10 Score=83.62 Aligned_cols=311 Identities=17% Similarity=0.119 Sum_probs=168.5
Q ss_pred CCCCCEECCC--CCCCCC-CCHHHHHHHHHHHHHHHCCCCCCH--HHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHH-
Q ss_conf 6655357357--654888-768999999999875005889861--8999999998488854388607788999999998-
Q T0636 13 AAAQAVCLAF--NENPEA-VEPRVQAAIAAAAARINRYPFDAE--PRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAE- 86 (336)
Q Consensus 13 ~~~~~i~L~~--Nenp~~-p~~~v~~al~~~~~~~~~Ypd~~~--~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~- 86 (336)
.+++.||+.+ .-+.+| -.|.+.+|+++.++....+..+.. .++-+.+.+... ..+.+..++++.++...+...
T Consensus 55 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~sg~eA~~~A~~~a 133 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLLALRVA 133 (453)
T ss_dssp TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC-CCHHHCCCCCCCCHHHHHCCCC
T ss_conf 999999836328878556898999999999997456745453202444555542001-1101001333331111110101
Q ss_pred --HCCC-CEEECCCCCHHHHHHHHH-HCCCE------EEECCC--C---CCCCCHHHHHHHCC---HH-HHHHHCCCCC-
Q ss_conf --4699-257638873569999998-18803------641554--3---56778899973000---24-3133036633-
Q T0636 87 --FSSM-RFVTAWPGFDGYRARIAV-SGLRH------FEIGLT--D---DLLLDPNDLAQVSR---DD-CVVLANPSNP- 146 (336)
Q Consensus 87 --~~~~-~vii~~P~y~~y~~~~~~-~g~~~------~~vp~~--~---~~~~d~~~l~~~~~---~~-~i~l~nPnNP- 146 (336)
..+. .++...-.|-++...+.. .+... ...|.. . -..-|++.+++..+ .+ +.++.-|-..
T Consensus 134 r~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~g~ 213 (453)
T 2cy8_A 134 RAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSH 213 (453)
T ss_dssp HHHHCCCEEEEECC----------------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHH
T ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 24543103874311346743210014577645577766667434445455612179999999847898689999603444
Q ss_pred CCCCCCHH----HHHHHHHHCCCCCC-CCCCCCCCCCCCCH---HHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHH
Q ss_conf 22222379----99999973787202-52100258866200---332452001202346523343453131178899999
Q T0636 147 TGQALSAG----ELDQLRQRAGKLLI-DETYVDYSSFRARG---LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAA 218 (336)
Q Consensus 147 TG~~~~~~----~l~~l~~~~~~~Iv-DeaY~~f~~~~~~~---l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~ 218 (336)
.|...+.+ .++++|+++++++| ||+...|.....-. ....|+++ +|||..| .|+.+|.+++.+++.+.
T Consensus 214 ~G~~~p~~~~l~~lr~lc~~~~illI~DEV~tG~r~~~~fa~~~~~v~PDiv---t~gK~lg-G~~P~~av~~~~~i~~~ 289 (453)
T 2cy8_A 214 FGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNHGMQALLDVQPDLT---CLAKASA-GGLPGGILGGREDVMGV 289 (453)
T ss_dssp HHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTTHHHHHHTCCCSEE---EEEGGGG-TTSSCEEEEECHHHHTT
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCEEEEECCC---CCCCCCC-CCCCCCCCCCCCHHHHH
T ss_conf 6852256310022332332115203420004430342036652104742120---1334566-64323111333024445
Q ss_pred HHHCC-------CCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHH-HHHHHHHHHHHCCCE--EEC-CCCCEEEEEC--
Q ss_conf 97337-------87787777899999997459--999999999999-999999999858978--616-9864788656--
Q T0636 219 MKRKQ-------WFCNVGTLDLHALEAALDND--RAREAHIAKTLA-QRRRVADALRGLGYR--VAS-SEANFVLVEN-- 283 (336)
Q Consensus 219 l~~~~-------~~~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~~-~r~~l~~~l~~lg~~--~~~-s~~~Fi~~~~-- 283 (336)
+.... .+|+-|.++..++.+.|+.- +.+.++.+++-. -++.|.+..++.++. +.. ..|..++...
T Consensus 290 ~~~~~~~~~~h~~T~~g~p~~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~i~~~~~g~~~G~gl~~~~e~ 369 (453)
T 2cy8_A 290 LSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPP 369 (453)
T ss_dssp SSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCT
T ss_pred HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCC
T ss_conf 43302434433345432111203344443121010156778875489999999999874997069987787778853653
Q ss_pred ---------------CCH---HHHHHHHHHCCCEEEECCCCCCCCEEEEEE-CCHHHHHHHHHHHHHHHH
Q ss_conf ---------------988---999999987693896077888887478874-798999999999999984
Q T0636 284 ---------------AAG---ERTLRFLRERGIQVKDAGQFGLHHHIRISI-GREEDNDRLLAALAEYSD 334 (336)
Q Consensus 284 ---------------~~~---~~~~~~L~~~gi~vr~~~~fg~~~~iRis~-~~~ee~~~l~~aL~~~~e 334 (336)
.+. ..+...|.++||++.+.. .+.+|. -|++|+++++++|++.++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Gv~~~~~~------~~~~s~~~teedId~~~~al~~al~ 433 (453)
T 2cy8_A 370 NTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGRG------SVFLSAQHEREHVEHLVTTFDRVLD 433 (453)
T ss_dssp TCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTTT------EEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEECCCC------CEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 456544333687732209999999999997792887778------8575089989999999999999999
No 170
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent enzyme, lyase, cytoplasm, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.40 E-value=4.3e-10 Score=83.65 Aligned_cols=274 Identities=14% Similarity=0.133 Sum_probs=157.0
Q ss_pred HHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCC-CCCC------
Q ss_conf 89999999984888543886077889999999984--69925763887356999999818803641554-3567------
Q T0636 53 PRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT-DDLL------ 123 (336)
Q Consensus 53 ~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~-~~~~------ 123 (336)
.+..+.+|+.||.+ ...+++||++.+...++.+. +||.|++..=+.-.....+.+.|+..+.+..+ +.++
T Consensus 208 ~eAE~~aA~~fGAd-~t~fvvNGTS~~N~avi~a~~~pGD~VlvdRn~HkSv~~gl~lsGA~Pvyl~p~~n~~giig~i~ 286 (755)
T 2vyc_A 208 GESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIY 286 (755)
T ss_dssp HHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCBCCCC
T ss_pred HHHHHHHHHHHCCC-CEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
T ss_conf 99999999982999-17998787899999999973899898997773399999999987997999478445555637777
Q ss_pred ---CCHHHHHHHC------------CHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCC---CCCCCCCH--
Q ss_conf ---7889997300------------02431330366332222237999999973787-202521002---58866200--
Q T0636 124 ---LDPNDLAQVS------------RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVD---YSSFRARG-- 182 (336)
Q Consensus 124 ---~d~~~l~~~~------------~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~IvDeaY~~---f~~~~~~~-- 182 (336)
++.+.+++.. +.+++++++|+- .|.+.+.++|.+++++++. +++|||... |.+.....
T Consensus 287 ~~~~~~e~i~~~I~~~p~~k~~~~~~~~~vvit~~TY-dG~~~dl~~I~~l~~~~~~~LlvDEAhga~~~f~p~~~~~~~ 365 (755)
T 2vyc_A 287 PQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYA 365 (755)
T ss_dssp GGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCT-TSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSS
T ss_pred CCCCCHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCC-CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHH
T ss_conf 2438999999999858033444147872999957865-874169999999998629959983332133434788730110
Q ss_pred --H----HHCCCHHHHHHHHHHHCCCCCCC-EEE-C-CCH-----HHH-HHHHHCCCCCCCCHH---HHHHHHHHHHH--
Q ss_conf --3----32452001202346523343453-131-1-788-----999-999733787787777---89999999745--
Q T0636 183 --L----AYGENELVFRSFSKSYGLAGLRL-GAL-F-GPS-----ELI-AAMKRKQWFCNVGTL---DLHALEAALDN-- 242 (336)
Q Consensus 183 --l----~~~~n~iv~~S~SK~~gl~GlRi-G~~-i-~~~-----~~i-~~l~~~~~~~~~~~~---~~~aa~~~l~~-- 242 (336)
. ...+..+++.|+.|+.+ ++.- +++ + ++. +.+ +.+... .+-+-+.+ +.-.+...++.
T Consensus 366 ~~g~~~~~~~~~~ivtqS~HK~L~--altqas~lhv~~~~~~id~~r~~~a~~~~-~STSPsY~l~ASlD~A~~~m~~~~ 442 (755)
T 2vyc_A 366 MRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMH-ATTSPLYAICASNDVAVSMMDGNS 442 (755)
T ss_dssp SCSCCCCCSSBEEEEEEETTTSSS--CCTTCEEEEEECCBTCCCHHHHHHHHHHT-SCSSCCHHHHHHHHHHHHHHSTHH
T ss_pred CCCCCCCCCCCEEEEEEECCCCCC--CCCCHHHHHHCCCCCCCCHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 258853134770499985665665--66622465542744436799999877653-488853999999999999875256
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHH---CC---CEEECCC----------------------------------------
Q ss_conf -999999999999999999999985---89---7861698----------------------------------------
Q T0636 243 -DRAREAHIAKTLAQRRRVADALRG---LG---YRVASSE---------------------------------------- 275 (336)
Q Consensus 243 -~~~~~~~~~~~~~~r~~l~~~l~~---lg---~~~~~s~---------------------------------------- 275 (336)
...+++.++....-|+++.+..+. .+ ++++.++
T Consensus 443 G~~L~~~~i~~a~~fR~~l~~l~~~~~~d~~~~f~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~w~l~p~~~whgf~ 522 (755)
T 2vyc_A 443 GLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFK 522 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHCCCCCCCCCCCHHHCCHHHHHCCCHHHHCCCCCHHCCCC
T ss_conf 79999999999999999999744332035410104666100356333432111104255532141123057640002444
Q ss_pred ----CCE------EEEECC-------------CHHHHHHHHHHCCCEEEECCCCCCCCE-EEEEEC-CHHHHHHHHHHHH
Q ss_conf ----647------886569-------------889999999876938960778888874-788747-9899999999999
Q T0636 276 ----ANF------VLVENA-------------AGERTLRFLRERGIQVKDAGQFGLHHH-IRISIG-REEDNDRLLAALA 330 (336)
Q Consensus 276 ----~~F------i~~~~~-------------~~~~~~~~L~~~gi~vr~~~~fg~~~~-iRis~~-~~ee~~~l~~aL~ 330 (336)
+.+ +++..+ .+..+.++|.++||.+--.+. ... +=+|+| |+++.++|+++|.
T Consensus 523 ~~~~~~~~lDP~Klti~t~g~g~~G~~~~~gi~a~~v~~~L~e~gI~~E~~~~---~~vl~l~s~g~t~~~~~~L~~aL~ 599 (755)
T 2vyc_A 523 DIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTD---FQIMFLFSMGVTRGKWGTLVNTLC 599 (755)
T ss_dssp TCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEECS---SEEEEECCTTCCTTTTHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCEEEECCC---CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 44666434666568997068787612665268579999999976978973488---708999588899899999999999
Q ss_pred HHHH
Q ss_conf 9984
Q T0636 331 EYSD 334 (336)
Q Consensus 331 ~~~e 334 (336)
++.+
T Consensus 600 ~~~~ 603 (755)
T 2vyc_A 600 SFKR 603 (755)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9998
No 171
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.39 E-value=5e-10 Score=83.21 Aligned_cols=289 Identities=12% Similarity=0.024 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCCCEEECCCCCHHHHHHHHH
Q ss_conf 999999987500588986--189999999984888543886077889999999984---699257638873569999998
Q T0636 34 QAAIAAAAARINRYPFDA--EPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSMRFVTAWPGFDGYRARIAV 108 (336)
Q Consensus 34 ~~al~~~~~~~~~Ypd~~--~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~~vii~~P~y~~y~~~~~~ 108 (336)
++++.+.+.. +.|...| -.++.+.+|+++|.+ ..+.++.++.|+.++++++ +||+|+++.=+|......+..
T Consensus 15 ~~~v~~~l~s-~~~~~~G~~v~~fE~~~a~~~~~~--~av~~~SgT~Al~lal~al~~~~gdeVi~p~~t~~~~~~~~~~ 91 (394)
T 1o69_A 15 LKYIEEVFKS-NYIAPLGEFVNRFEQSVKDYSKSE--NALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICY 91 (394)
T ss_dssp HHHHHHHHHH-TTTSCTTHHHHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHH
T ss_pred HHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHCCC--EEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 9999999952-985789989999999999997839--6999778799999999986988829999499760642146763
Q ss_pred HCCCEEEECCCCCCCCCHHHH---HH--HCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCH
Q ss_conf 188036415543567788999---73--0002431330366332222237999999973787202-52100258866200
Q T0636 109 SGLRHFEIGLTDDLLLDPNDL---AQ--VSRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLI-DETYVDYSSFRARG 182 (336)
Q Consensus 109 ~g~~~~~vp~~~~~~~d~~~l---~~--~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~Iv-DeaY~~f~~~~~~~ 182 (336)
.|...+.+..+++...+..+. .. ..+++++++. +--|...+.+++..+++++++.|+ |.|-.-.+......
T Consensus 92 ~g~~pv~~d~~~~~~~~~~~~~~~~~~~~~~~~aii~~---~~~g~~~d~~~i~~i~~~~~i~vIED~Aqa~Ga~~~~k~ 168 (394)
T 1o69_A 92 LKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILT---HLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKA 168 (394)
T ss_dssp TTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEE
T ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEE---CCCCCCCHHHHHHHHHHHCCCEEEEECCCHHCCEECCEE
T ss_conf 66078872366653222033555541035686799982---467886058999999997596079604432117238842
Q ss_pred HHHCCCHHHHHHH--HHHHCCCCCCCEEECC-CHHHHHHHHHCCCC----------------CCCCHHHHHHHHHHHHHH
Q ss_conf 3324520012023--4652334345313117-88999999733787----------------787777899999997459
Q T0636 183 LAYGENELVFRSF--SKSYGLAGLRLGALFG-PSELIAAMKRKQWF----------------CNVGTLDLHALEAALDND 243 (336)
Q Consensus 183 l~~~~n~iv~~S~--SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~~----------------~~~~~~~~~aa~~~l~~~ 243 (336)
+....+ +-+.|| +|.++.. -=|+++. ++++.+.++..+.. +-++.+....+...|+.-
T Consensus 169 ~G~~gd-~~~fSF~~~K~l~~g--~GG~i~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rm~~~~Aaig~~qL~~l 245 (394)
T 1o69_A 169 LGTFGE-FGVYSYNGNKIITTS--GGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVL 245 (394)
T ss_dssp TTSSSS-EEEEECCTTSSSCCS--SCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTH
T ss_pred CCCCCC-EEEEECCCCCCCCCC--CCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 366765-368846788602147--89634158999999999876518888655542247853134613778899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEECC-CC------CEEEEEC----------------------CCHHHHHHHHH
Q ss_conf 9999999999999999999998589786169-86------4788656----------------------98899999998
Q T0636 244 RAREAHIAKTLAQRRRVADALRGLGYRVASS-EA------NFVLVEN----------------------AAGERTLRFLR 294 (336)
Q Consensus 244 ~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s-~~------~Fi~~~~----------------------~~~~~~~~~L~ 294 (336)
+ +.+++.++..+++.+.|++........ .. .|+.+.. ..-+.+.+.|.
T Consensus 246 ~---~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 322 (394)
T 1o69_A 246 E---QRVLKKREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLK 322 (394)
T ss_dssp H---HHHHHHHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 9---9999999999999997247665578889996640578999715522000244430121111024114999999999
Q ss_pred HCCCEEEECCCC-------------CCC-------CEEEEEE---CCHHHHHHHHHHHHHHHH
Q ss_conf 769389607788-------------888-------7478874---798999999999999984
Q T0636 295 ERGIQVKDAGQF-------------GLH-------HHIRISI---GREEDNDRLLAALAEYSD 334 (336)
Q Consensus 295 ~~gi~vr~~~~f-------------g~~-------~~iRis~---~~~ee~~~l~~aL~~~~e 334 (336)
++||-+|++..+ .++ +.+.+-+ -+.+|+++.++.+++++.
T Consensus 323 ~~gI~~~~~~~~l~~~~~~~~~~~~~~pna~~l~~~~i~LP~~~~lt~~di~~I~~~i~~~~k 385 (394)
T 1o69_A 323 NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred HCCCCEEEECCCHHHCHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 779987861864342965515788899899999839798979987799999999999999998
No 172
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin B6, lyase; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A*
Probab=99.38 E-value=6.4e-09 Score=76.03 Aligned_cols=278 Identities=11% Similarity=0.026 Sum_probs=162.5
Q ss_pred HHHHHHHHHCCCHH---------HEEEECCHHHHHHHHHHH-----HC-----CC-----------CEEECCCCCHHHHH
Q ss_conf 99999998488854---------388607788999999998-----46-----99-----------25763887356999
Q T0636 55 VMRKLAEHFSCPED---------NLMLVRGIDECFDRISAE-----FS-----SM-----------RFVTAWPGFDGYRA 104 (336)
Q Consensus 55 Lr~aia~~~~v~~d---------~I~~t~Gs~~~i~~~~~~-----~~-----~~-----------~vii~~P~y~~y~~ 104 (336)
+.+.+++.+|.+.+ .-++|.|++++....+.+ ++ +. .+++++=+=.....
T Consensus 118 v~~wl~~l~g~p~~~~~~~~~~~gg~~tsGgs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~aH~Si~K 197 (486)
T 1js3_A 118 MMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVER 197 (486)
T ss_dssp HHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHH
T ss_pred HHHHHHHHHCCCCHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHH
T ss_conf 99999998569811104788998827886489999999999999877641444667544466676599965054699999
Q ss_pred HHHHHCCCEEEECCCCCCCCCHHHHHHHCCH--------HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC-CCCCCCCC
Q ss_conf 9998188036415543567788999730002--------43133036633222223799999997378720-25210025
Q T0636 105 RIAVSGLRHFEIGLTDDLLLDPNDLAQVSRD--------DCVVLANPSNPTGQALSAGELDQLRQRAGKLL-IDETYVDY 175 (336)
Q Consensus 105 ~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~--------~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~I-vDeaY~~f 175 (336)
++...|..++.||.++++.+|+++|++..+. -+|+.+-....||.+=+.++|.+++++++.++ ||-||..+
T Consensus 198 aa~~lGl~~~~V~~d~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtT~~Ga~Dpl~~I~~i~~~~~~wlHVDaA~Gg~ 277 (486)
T 1js3_A 198 AGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGS 277 (486)
T ss_dssp HHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 99857998267413888785999999999987636998669994058855311267999999997527806860103421
Q ss_pred CCCCC--CHH-HHCCCH-HHHHHHHHHHCCCCCCCEEE-CCCHHHHHHHHHCCC-----------------CCC--CC--
Q ss_conf 88662--003-324520-01202346523343453131-178899999973378-----------------778--77--
Q T0636 176 SSFRA--RGL-AYGENE-LVFRSFSKSYGLAGLRLGAL-FGPSELIAAMKRKQW-----------------FCN--VG-- 229 (336)
Q Consensus 176 ~~~~~--~~l-~~~~n~-iv~~S~SK~~gl~GlRiG~~-i~~~~~i~~l~~~~~-----------------~~~--~~-- 229 (336)
.-... ..+ ..-+.. -+.-.+.|.++.|- -+|++ +-+++.......... .++ .+
T Consensus 278 ~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P~-~~g~~l~r~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~tl~~sR~ 356 (486)
T 1js3_A 278 AFICPEFRHLLNGVEFADSFNFNPHKWLLVNF-DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRR 356 (486)
T ss_dssp GGGSTTTGGGGTTGGGCSEEEECHHHHSSCCS-SCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCC
T ss_pred HHCCCCHHHHHCCCCCCCEEEECCCCCCCCCC-CCEEEEEECHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44080106764699887241027432267688-74278994278889987304576436533566677743356666752
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-CCCCCEEEEECCCHH----HHHHHHHHC-CCEE
Q ss_conf --77899999997459999999999999999999999858-97861-698647886569889----999999876-9389
Q T0636 230 --TLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEANFVLVENAAGE----RTLRFLRER-GIQV 300 (336)
Q Consensus 230 --~~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~-~s~~~Fi~~~~~~~~----~~~~~L~~~-gi~v 300 (336)
.+...+++..+ ..+-+.+.+++.....+++.+.+++. ++.++ +++.+-+.++....+ .+.+.+.+. ++++
T Consensus 357 ~~al~lw~~l~~~-G~~G~~~~i~~~~~~A~~l~~~l~~~~~fel~~~p~~~iV~Fr~~~~d~~n~~l~~~l~~~g~~~~ 435 (486)
T 1js3_A 357 FRSLKMWFVFRMY-GVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHL 435 (486)
T ss_dssp CTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBC
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCEEE
T ss_conf 3699999999986-088999999999999999999985499969967995589999816980889999999985098999
Q ss_pred EECCCCCCCCEEEEEEC----CHHHHHHHHHHHHHHHHC
Q ss_conf 60778888874788747----989999999999999842
Q T0636 301 KDAGQFGLHHHIRISIG----REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 301 r~~~~fg~~~~iRis~~----~~ee~~~l~~aL~~~~e~ 335 (336)
.+.. .+..-++|++++ ++++++++++.|++..++
T Consensus 436 s~t~-~~g~~~lR~~~~n~~t~~~dvd~l~~~i~~~a~~ 473 (486)
T 1js3_A 436 VPCR-LRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp EEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEE-ECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 6546-9999899999689999999999999999999999
No 173
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.36 E-value=8.5e-10 Score=81.71 Aligned_cols=313 Identities=12% Similarity=0.099 Sum_probs=171.3
Q ss_pred CCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCC------CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 6553573576--54888-7689999999998750058------8986189999999984888543886077889999999
Q T0636 14 AAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRY------PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 14 ~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Y------pd~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
+++.||+.++ -+.+| -.|.+.+|+.+.+.++..+ +.....+|.+.+++...-.-+.+..+++++|+...++
T Consensus 54 G~~ylD~~~g~g~~~lGH~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~SGseA~e~Al 133 (472)
T 3hmu_A 54 GEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNI 133 (472)
T ss_dssp CCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
T ss_conf 89999865499977607998999999999985557735764566799999999977647877587997188627999999
Q ss_pred HHH------CC---C-CEEECCCCCHHHHH-HHHHHCC-----------CEE--EECC--CCCCCCCH--------HHHH
Q ss_conf 984------69---9-25763887356999-9998188-----------036--4155--43567788--------9997
Q T0636 85 AEF------SS---M-RFVTAWPGFDGYRA-RIAVSGL-----------RHF--EIGL--TDDLLLDP--------NDLA 130 (336)
Q Consensus 85 ~~~------~~---~-~vii~~P~y~~y~~-~~~~~g~-----------~~~--~vp~--~~~~~~d~--------~~l~ 130 (336)
+.. .| . .++....+|-+... .....|. .+. ..|. ......+. ++++
T Consensus 134 klAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 213 (472)
T 3hmu_A 134 RMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELE 213 (472)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99998677549988649999836878886545445787534467788887766788875456678883778899999999
Q ss_pred H----HCCHH-HHHHHCCCCC-CCCCC-CH---HHHHHHHHHCCCC-CCCCCCCCCCCCCCC----HHHHCCCHHHHHHH
Q ss_conf 3----00024-3133036633-22222-37---9999999737872-025210025886620----03324520012023
Q T0636 131 Q----VSRDD-CVVLANPSNP-TGQAL-SA---GELDQLRQRAGKL-LIDETYVDYSSFRAR----GLAYGENELVFRSF 195 (336)
Q Consensus 131 ~----~~~~~-~i~l~nPnNP-TG~~~-~~---~~l~~l~~~~~~~-IvDeaY~~f~~~~~~----~l~~~~n~iv~~S~ 195 (336)
+ ..+.+ +.+|.-|=.- .|... ++ +.|.+++++++++ |+||++..|+..-.. .....|+++ ++
T Consensus 214 ~~i~~~~~~~vAAvi~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~~v~PDiv---~~ 290 (472)
T 3hmu_A 214 EAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM---TI 290 (472)
T ss_dssp HHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE---EE
T ss_pred HHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---EE
T ss_conf 999973899879999827778889835998999999999998298999603332577577787100279979989---88
Q ss_pred HHHHCCCCCCCEEECCCHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHH-HHHHHHHHHHHHCC
Q ss_conf 465233434531311788999999733----787787777899999997459--99999999999-99999999998589
Q T0636 196 SKSYGLAGLRLGALFGPSELIAAMKRK----QWFCNVGTLDLHALEAALDND--RAREAHIAKTL-AQRRRVADALRGLG 268 (336)
Q Consensus 196 SK~~gl~GlRiG~~i~~~~~i~~l~~~----~~~~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~-~~r~~l~~~l~~lg 268 (336)
||..|-...-+|.++..+.+.+....- ..+|+-|.++..++.+.|+.- +.+.++++++- .-++.+.+.+++.+
T Consensus 291 gK~l~gG~~p~a~~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~~~~~~~ 370 (472)
T 3hmu_A 291 AKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHP 370 (472)
T ss_dssp CGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGST
T ss_pred CCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98265598652115658999985167877625588999689999999999874234999999999999999999996289
Q ss_pred CEE-ECCCCCEEEEECC---------------CHHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHH
Q ss_conf 786-1698647886569---------------88999999987693896077888887478874---7989999999999
Q T0636 269 YRV-ASSEANFVLVENA---------------AGERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAAL 329 (336)
Q Consensus 269 ~~~-~~s~~~Fi~~~~~---------------~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL 329 (336)
+.. ....|.+.=+++. ....+.+.+.++|+++++++ +.+|++- -+++|++.++++|
T Consensus 371 ~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~g-----~~l~~~PpL~it~~eid~~l~~l 445 (472)
T 3hmu_A 371 LVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-----DRMIISPPLVITPAEIDEMFVRI 445 (472)
T ss_dssp TEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-----TEEEECCCTTCCHHHHHHHHHHH
T ss_pred CEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECC-----CEEEEECCCCCCHHHHHHHHHHH
T ss_conf 8347972063899997157420123333223899999999997891895259-----88999699888999999999999
Q ss_pred HHHHH
Q ss_conf 99984
Q T0636 330 AEYSD 334 (336)
Q Consensus 330 ~~~~e 334 (336)
++..+
T Consensus 446 ~~aL~ 450 (472)
T 3hmu_A 446 RKSLD 450 (472)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 174
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.34 E-value=2.3e-08 Score=72.39 Aligned_cols=279 Identities=18% Similarity=0.134 Sum_probs=160.2
Q ss_pred HHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-----C---------CCC--EEECCCCCHHHHHHHHHHCC---CEEE
Q ss_conf 999999984888543886077889999999984-----6---------992--57638873569999998188---0364
Q T0636 55 VMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-----S---------SMR--FVTAWPGFDGYRARIAVSGL---RHFE 115 (336)
Q Consensus 55 Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~-----~---------~~~--vii~~P~y~~y~~~~~~~g~---~~~~ 115 (336)
..+.+++.+|.+...-++|+|++++....+.+. + .+. +++++-+-.....++...|+ .++.
T Consensus 153 vi~~l~~l~G~~~~~G~~t~GGS~aNl~al~~AR~~~~~~~~~~g~~~~~~~vv~~S~~aH~Sv~KAa~~lGlg~~~v~~ 232 (515)
T 2jis_A 153 VLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRV 232 (515)
T ss_dssp HHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEE
T ss_pred HHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 99999998199987862568808999999999999864355650646799818997686629999999980754242588
Q ss_pred ECCCCCCCCCHHHHHHHCCH---H-----HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC-CCCCCCCCCCCCC---CHH
Q ss_conf 15543567788999730002---4-----3133036633222223799999997378720-2521002588662---003
Q T0636 116 IGLTDDLLLDPNDLAQVSRD---D-----CVVLANPSNPTGQALSAGELDQLRQRAGKLL-IDETYVDYSSFRA---RGL 183 (336)
Q Consensus 116 vp~~~~~~~d~~~l~~~~~~---~-----~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~I-vDeaY~~f~~~~~---~~l 183 (336)
+|.+++++.|+++|++..+. + +|+.+...-.||.+=+.++|.+++++++.++ ||.||..+.-... ..+
T Consensus 233 v~~d~~~~md~~~L~~~I~~~~~~G~~p~~VvataGTT~~Ga~Dpl~eIa~i~~~~~~WlHVDaA~GG~~~~~~~~r~~~ 312 (515)
T 2jis_A 233 VKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLL 312 (515)
T ss_dssp ECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGG
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCHHH
T ss_conf 56786657699999999999986599846999956887762525099999999863874886243202454274431134
Q ss_pred HHCCCH-HHHHHHHHHHCCCCCCCEEEC-CCH-HHHHHHHHCCC---------------C--CCC--C----HHHHHHHH
Q ss_conf 324520-012023465233434531311-788-99999973378---------------7--787--7----77899999
Q T0636 184 AYGENE-LVFRSFSKSYGLAGLRLGALF-GPS-ELIAAMKRKQW---------------F--CNV--G----TLDLHALE 237 (336)
Q Consensus 184 ~~~~n~-iv~~S~SK~~gl~GlRiG~~i-~~~-~~i~~l~~~~~---------------~--~~~--~----~~~~~aa~ 237 (336)
..-+.. -+.-.+-|.++ ..+-+|.+. -++ .+......... + +++ + .+..-.++
T Consensus 313 ~gi~~aDSit~d~HK~l~-~p~~~s~~l~r~~~~l~~~~~~~~a~YL~~~~~~~~~~~d~~~~t~~~sRr~~alklW~~l 391 (515)
T 2jis_A 313 DGIQRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMW 391 (515)
T ss_dssp TTGGGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHH
T ss_pred CCCCCCCEEEECCCCCCC-CCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 486532313456430247-6888504664277888877532576501346766666657333445667662069999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-CCCCC---EEEEEC--------CC--------HHHHHHHHHHC
Q ss_conf 997459999999999999999999999858-97861-69864---788656--------98--------89999999876
Q T0636 238 AALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEAN---FVLVEN--------AA--------GERTLRFLRER 296 (336)
Q Consensus 238 ~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~-~s~~~---Fi~~~~--------~~--------~~~~~~~L~~~ 296 (336)
..+. .+-+.+.+++..+..+++.+.+++. ++.++ +++-+ |-+.+. ++ ...+.+.|.+.
T Consensus 392 ~~~G-~~G~~~~i~~~~~~A~~l~~~i~~~~~fel~~~p~~~~VcFr~~p~~l~~~~~~~~~~~~l~~~~~~i~~~l~~~ 470 (515)
T 2jis_A 392 KAQG-DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKE 470 (515)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHH
T ss_pred HHHC-HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 7608-878999999999999999999835999799679865799998107444654334468999999999999999961
Q ss_pred CCE-EEECCCCCCCCEEEEEEC----CHHHHHHHHHHHHHHHHC
Q ss_conf 938-960778888874788747----989999999999999842
Q T0636 297 GIQ-VKDAGQFGLHHHIRISIG----REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 297 gi~-vr~~~~fg~~~~iRis~~----~~ee~~~l~~aL~~~~e~ 335 (336)
|.+ +.+...-+...++|++++ ++++++.+++.|++.-++
T Consensus 471 G~~~v~~t~~~~~~~~lR~~i~np~tt~~did~l~~~I~~lg~~ 514 (515)
T 2jis_A 471 GSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999876889933799999699999999999999999998630
No 175
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomics initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus HB8} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.33 E-value=3.7e-09 Score=77.58 Aligned_cols=297 Identities=19% Similarity=0.178 Sum_probs=166.2
Q ss_pred CCHHHHHHHHHHHHHHHCC-C--CCCHH-------HHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH---CCCCEEEC
Q ss_conf 7689999999998750058-8--98618-------9999999984888543886077889999999984---69925763
Q T0636 29 VEPRVQAAIAAAAARINRY-P--FDAEP-------RVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSMRFVTA 95 (336)
Q Consensus 29 p~~~v~~al~~~~~~~~~Y-p--d~~~~-------~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~~~~---~~~~vii~ 95 (336)
.||.+ +.+.....-+..| | +.... ++-+.+++-.|.+.-+.-...|++.....+..+. ...++++.
T Consensus 78 ~p~~i-~~~~~~~~~~t~ytPyq~E~sQG~Lq~l~e~q~~l~eltGmd~~n~s~~~ga~~~~~~~~~~~~~~~~~~~~~~ 156 (438)
T 1wyu_A 78 VPPVV-QALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVS 156 (438)
T ss_dssp CCHHH-HHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ECHHH-HHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 17899-98875935575489840667799999999999999985287624668507889999999987631133220234
Q ss_pred CCCCHHHH----HHHHHHCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 88735699----99998188036415543567788999730002431330366332222237999999973787202521
Q T0636 96 WPGFDGYR----ARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDET 171 (336)
Q Consensus 96 ~P~y~~y~----~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~IvDea 171 (336)
.-..+.+. ..+...|.+++.++.++. ..+..+ ..+++.++++.||| -.|.+-+.+++.++++..+.+++|.+
T Consensus 157 ~~~~p~~~~v~~a~a~~~g~~vv~~~~~~~-~~~~~~--~~~~~A~vmit~Pn-t~G~~e~~~~i~~~~h~~g~l~~~~a 232 (438)
T 1wyu_A 157 QGVHPEYRAVLRAYLEAVGAKLLTLPLEGG-RTPLPE--VGEEVGAVVVQNPN-FLGALEDLGPFAEAAHGAGALFVAVA 232 (438)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEEEECCBTT-BCCCCC--CCTTEEEEEEESSC-TTSBCCCHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECCCCC-CCHHHH--CCCCEEEEEECCCC-CCCEECCHHHHHHHHHCCCCEEEEHH
T ss_conf 657878898877666533854776210246-312454--27765999963677-75630334899998602562475300
Q ss_pred CC-CCCCCCCCHHHHCCCHHHH--HHHH--HHHCCCCCCCEEECCCHHH----------------------------HHH
Q ss_conf 00-2588662003324520012--0234--6523343453131178899----------------------------999
Q T0636 172 YV-DYSSFRARGLAYGENELVF--RSFS--KSYGLAGLRLGALFGPSEL----------------------------IAA 218 (336)
Q Consensus 172 Y~-~f~~~~~~~l~~~~n~iv~--~S~S--K~~gl~GlRiG~~i~~~~~----------------------------i~~ 218 (336)
-. ..+....+ -...-++++. .+|+ +.||-|| .|++.+.+++ -+.
T Consensus 233 n~~al~~l~~P-ge~GaDiv~g~~q~fg~p~~~GGP~--~G~~a~~~~~~r~lPgrivg~~~d~~G~~~~~l~lqtreqh 309 (438)
T 1wyu_A 233 DPLSLGVLKPP-GAYGADIAVGDGQSLGLPMGFGGPH--FGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQY 309 (438)
T ss_dssp CTTGGGTBCCH-HHHTCSEEEEECTTTTCCCGGGCSC--CEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHH
T ss_pred HHHHHCCCCCC-CCCCCCEEEECCCEECCCCCCCCCC--CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 47764264366-6567655872363121565567676--54301332432158764455543347862201111445554
Q ss_pred HHHCCCCCCCCH----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCCCE--EEEECC-CHHHH
Q ss_conf 973378778777----78999999974-59999999999999999999999858-97861698647--886569-88999
Q T0636 219 MKRKQWFCNVGT----LDLHALEAALD-NDRAREAHIAKTLAQRRRVADALRGL-GYRVASSEANF--VLVENA-AGERT 289 (336)
Q Consensus 219 l~~~~~~~~~~~----~~~~aa~~~l~-~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~~s~~~F--i~~~~~-~~~~~ 289 (336)
+++-+...|+.+ .+..++..+.- ..+=+++.-+....+..++.+.|.++ |++.+.+...| +.++.+ +++++
T Consensus 310 irrekatsnict~q~l~al~a~~Y~~~~G~eGL~~ia~~a~~~A~yl~~~L~~~~g~~~~~~~~~f~Ef~~~~~~~a~di 389 (438)
T 1wyu_A 310 IRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPKDPEAV 389 (438)
T ss_dssp HHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECSSCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEECCCCHHHH
T ss_conf 55543310033677899999999876504213999999999999999998654489040489971158999789999999
Q ss_pred HHHHHHCCCEEE-ECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHH
Q ss_conf 999987693896-0778888874788747---9899999999999998
Q T0636 290 LRFLRERGIQVK-DAGQFGLHHHIRISIG---REEDNDRLLAALAEYS 333 (336)
Q Consensus 290 ~~~L~~~gi~vr-~~~~fg~~~~iRis~~---~~ee~~~l~~aL~~~~ 333 (336)
.+.|.++|+.-. +....-.++.+-|++. +++++++|+++|+++.
T Consensus 390 ~k~l~d~G~~~~~~~~~~~~~~~lli~~TEt~tkeeiD~~i~al~eil 437 (438)
T 1wyu_A 390 RRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp HHHHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 999996799888666567799959994798999999999999999985
No 176
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1; HET: MSE; 1.81A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.31 E-value=5.5e-09 Score=76.46 Aligned_cols=279 Identities=15% Similarity=0.114 Sum_probs=156.1
Q ss_pred HHHHHHHHHCCCHH-HEEEECCHHHHHHHHHHHH--------CC------------C--CEEECCCCCHHHHHHHHHHCC
Q ss_conf 99999998488854-3886077889999999984--------69------------9--257638873569999998188
Q T0636 55 VMRKLAEHFSCPED-NLMLVRGIDECFDRISAEF--------SS------------M--RFVTAWPGFDGYRARIAVSGL 111 (336)
Q Consensus 55 Lr~aia~~~~v~~d-~I~~t~Gs~~~i~~~~~~~--------~~------------~--~vii~~P~y~~y~~~~~~~g~ 111 (336)
+.+.+++.+|.++. .=++|+|++++-...+.+. .+ + .+++.+=+=......+...|.
T Consensus 145 vi~wl~~~~g~~~~~~G~~tsGGT~aNl~al~~AR~~~~~~~~~~~~~~~g~~~~~~~~~i~~S~~aH~Sv~Kaa~~lGl 224 (497)
T 2qma_A 145 VVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGL 224 (497)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTS
T ss_pred HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCC
T ss_conf 99999998395988887992817999999999999999877333430002664456873999877116999999998188
Q ss_pred ---CEEEECCCCCCCCCHHHHHHHCCH--------HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC-CCCCCCCCC-CC
Q ss_conf ---036415543567788999730002--------43133036633222223799999997378720-252100258-86
Q T0636 112 ---RHFEIGLTDDLLLDPNDLAQVSRD--------DCVVLANPSNPTGQALSAGELDQLRQRAGKLL-IDETYVDYS-SF 178 (336)
Q Consensus 112 ---~~~~vp~~~~~~~d~~~l~~~~~~--------~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~I-vDeaY~~f~-~~ 178 (336)
.++.+|.++++++|++++++..+. -+|+.+-.++.||.+=+.++|.+++++++.++ ||.||..+. ..
T Consensus 225 g~~~v~~Vp~d~~g~md~~~L~~~i~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~~~wlHVDaA~gg~~l~~ 304 (497)
T 2qma_A 225 GEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILS 304 (497)
T ss_dssp CGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGS
T ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCC
T ss_conf 97048985568788578999999999888649962999833776562024679999999975043578850434432100
Q ss_pred CCCHH-HHCCCH-HHHHHHHHHHCCCCCCCEEEC-CCHHHHHHH-------HHC-CCC-----CCC------CHHHHHHH
Q ss_conf 62003-324520-012023465233434531311-788999999-------733-787-----787------77789999
Q T0636 179 RARGL-AYGENE-LVFRSFSKSYGLAGLRLGALF-GPSELIAAM-------KRK-QWF-----CNV------GTLDLHAL 236 (336)
Q Consensus 179 ~~~~l-~~~~n~-iv~~S~SK~~gl~GlRiG~~i-~~~~~i~~l-------~~~-~~~-----~~~------~~~~~~aa 236 (336)
..... ..-+.. -+.-++.|.++.|- -+|.++ -++...+.+ ..- ... +++ ..+...+.
T Consensus 305 ~~~~~~~gie~aDSit~d~HK~l~~P~-~~g~llvrd~~~l~~~~~~~~yl~~~~~~~~~~~~~~l~~sRr~~aLklw~~ 383 (497)
T 2qma_A 305 SHKSRLKGVERAHSISVDFHKLFYQTI-SCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMT 383 (497)
T ss_dssp TTGGGGTTGGGCSEEEEETTTTTCCCS-SCEEEEESCGGGGGGGCC--------------------CCSCCCTHHHHHHH
T ss_pred HHHHHHCCCCCEEEEEECCCCCCCCCC-CCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 000332586510588635421367787-7515887337778776135652367776678742356666865136899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-CCCCCEEEEECC----CHH----HHHHHHHHCCCEEEECCCC
Q ss_conf 9997459999999999999999999999858-97861-698647886569----889----9999998769389607788
Q T0636 237 EAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEANFVLVENA----AGE----RTLRFLRERGIQVKDAGQF 306 (336)
Q Consensus 237 ~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~-~s~~~Fi~~~~~----~~~----~~~~~L~~~gi~vr~~~~f 306 (336)
+..+. .+-+.+.+++.....+++.+.+++. +++++ +++-+-+.++.. +-+ .+.+.+.+.|..+...+..
T Consensus 384 l~~~G-~~g~~~~i~~~~~lA~~l~~~l~~~~~~el~~~p~l~iV~Fr~~~~~~~~d~ln~~l~~~l~~~G~~~~~~t~~ 462 (497)
T 2qma_A 384 MQNVG-PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIV 462 (497)
T ss_dssp HHHTC-HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEE
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCEE
T ss_conf 98633-99999999999999999999973699969967987689999827862168999999999999469899940259
Q ss_pred CCCCEEEEEEC----CHHHHHHHHHHHHHHHHC
Q ss_conf 88874788747----989999999999999842
Q T0636 307 GLHHHIRISIG----REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 307 g~~~~iRis~~----~~ee~~~l~~aL~~~~e~ 335 (336)
....++|++++ |+++++++++.+++.-++
T Consensus 463 ~g~~~lR~~v~np~tt~~did~l~~~i~~~a~e 495 (497)
T 2qma_A 463 DGKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 996799999689999999999999999999997
No 177
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.31 E-value=6.1e-08 Score=69.71 Aligned_cols=279 Identities=13% Similarity=0.100 Sum_probs=159.9
Q ss_pred HHHHHHHHHCCCHHH--EEEECCHHHHHHHHHHHH-----CC---------CC--EEECCCCCHHHHHHHHHHCC---CE
Q ss_conf 999999984888543--886077889999999984-----69---------92--57638873569999998188---03
Q T0636 55 VMRKLAEHFSCPEDN--LMLVRGIDECFDRISAEF-----SS---------MR--FVTAWPGFDGYRARIAVSGL---RH 113 (336)
Q Consensus 55 Lr~aia~~~~v~~d~--I~~t~Gs~~~i~~~~~~~-----~~---------~~--vii~~P~y~~y~~~~~~~g~---~~ 113 (336)
..+.+++.+|.+.+. =++|+|++++....+.+. ++ ++ |++++=+=.....++...|. .+
T Consensus 137 vi~wl~~l~g~~~~~~~G~~tsGgT~anl~al~~AR~~~~~~~~~~~~~~~~~~~v~~S~~aH~Sv~Kaa~~lGlg~~~v 216 (504)
T 2okj_A 137 TLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNV 216 (504)
T ss_dssp HHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEE
T ss_conf 99999998399988888898086489999999999998573555317577887389933622289999999749985247
Q ss_pred EEECCCCCCCCCHHHHHHHCCH-H-------HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC-CCCCCCCCCCC---CCC
Q ss_conf 6415543567788999730002-4-------3133036633222223799999997378720-25210025886---620
Q T0636 114 FEIGLTDDLLLDPNDLAQVSRD-D-------CVVLANPSNPTGQALSAGELDQLRQRAGKLL-IDETYVDYSSF---RAR 181 (336)
Q Consensus 114 ~~vp~~~~~~~d~~~l~~~~~~-~-------~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~I-vDeaY~~f~~~---~~~ 181 (336)
+.+|.++++++|++++++..+. + +|+.+-....||.+=+.++|.+++++++.++ ||.||..+.-. ...
T Consensus 217 ~~v~~d~~~~md~~~L~~~i~~~~~~g~~p~~VvataGTT~~GaiDpl~~I~~i~~~~~~wlHVDaA~gg~~~~~~~~~~ 296 (504)
T 2okj_A 217 ILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRH 296 (504)
T ss_dssp EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCH
T ss_conf 87345876672899999999998856997559983278866321044999999999819869972412242003744336
Q ss_pred HHHHCCCH-HHHHHHHHHHCCCCCCCEEECC-CHHHHHHHHHCCCC-----------------CCC------CHHHHHHH
Q ss_conf 03324520-0120234652334345313117-88999999733787-----------------787------77789999
Q T0636 182 GLAYGENE-LVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRKQWF-----------------CNV------GTLDLHAL 236 (336)
Q Consensus 182 ~l~~~~n~-iv~~S~SK~~gl~GlRiG~~i~-~~~~i~~l~~~~~~-----------------~~~------~~~~~~aa 236 (336)
.+..-+.. -+.-.+.|.++.| .-+|++.. ++...........+ +++ ..+..-..
T Consensus 297 ~~~gi~~aDSit~d~HK~l~~p-~~~g~~l~r~~~~~~~~~~~~~~YL~~~~~~~~~~~~~~~~~~~~sR~~~alklw~~ 375 (504)
T 2okj_A 297 KLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLM 375 (504)
T ss_dssp GGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHH
T ss_pred HHCCCCCCCEEEECCCCCCCCC-CCCEEEECCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 4479640025546665446757-776100137899988764147201166654567777756566666731569999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE---CCCCC---EEEEEC-----CC-----------HHHHHHHH
Q ss_conf 9997459999999999999999999999858-97861---69864---788656-----98-----------89999999
Q T0636 237 EAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA---SSEAN---FVLVEN-----AA-----------GERTLRFL 293 (336)
Q Consensus 237 ~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~---~s~~~---Fi~~~~-----~~-----------~~~~~~~L 293 (336)
+..+. .+-+.+.+++.....+++.+.+++. +++++ +++-+ |-+.+. .+ ...+.+.|
T Consensus 376 l~~~G-~~g~~~~i~~~~~lA~~l~~~l~~~~~felv~~~~p~~~~V~Fr~~p~~l~~~~~~~~~~~~~~~~n~~l~~~l 454 (504)
T 2okj_A 376 WKAKG-TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALM 454 (504)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHH
T ss_pred HHHCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 73148-86799999999999999999985089848975699855799997127100456653345999999999999999
Q ss_pred HHCCCEEEECC-CCCCCCEEEEEEC----CHHHHHHHHHHHHHHHHC
Q ss_conf 87693896077-8888874788747----989999999999999842
Q T0636 294 RERGIQVKDAG-QFGLHHHIRISIG----REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 294 ~~~gi~vr~~~-~fg~~~~iRis~~----~~ee~~~l~~aL~~~~e~ 335 (336)
.+.|....... ......++|++++ ++++++.+++.|++.-++
T Consensus 455 ~~~G~~~~~~~~~~~~~~~lR~~~~n~~tt~~did~l~~~i~~~a~e 501 (504)
T 2okj_A 455 MESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp HHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred HHCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 94598999741706992899999699999999999999999999988
No 178
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; biotin biosynthesis, pyridoxal phosphate, S-adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} PDB: 3drd_A 3du4_A*
Probab=99.31 E-value=3.2e-09 Score=77.98 Aligned_cols=314 Identities=12% Similarity=0.090 Sum_probs=160.3
Q ss_pred CCCCCEECCCC--CCCCC-CCHHHHHHHHHHHHHHHCCC-----CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
Q ss_conf 66553573576--54888-76899999999987500588-----986189999999984888543886077889999999
Q T0636 13 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARINRYP-----FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 84 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~-p~~~v~~al~~~~~~~~~Yp-----d~~~~~Lr~aia~~~~v~~d~I~~t~Gs~~~i~~~~ 84 (336)
.+++.||+..+ -+.+| -.|.+.+|+.+.+.++.... .+...++-+.+.....-.-+.+..+++++++.....
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~sGsea~e~Ai 121 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIAL 121 (448)
T ss_dssp TSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHH
T ss_pred CCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH
T ss_conf 98999982015875444789699999999998663775676557789999999876407866686885158741899999
Q ss_pred HH---H------CC-CCEEECCCCCHHHHHHH-HHHCCC--------------EEEECC--CCCCC-------CCHHHHH
Q ss_conf 98---4------69-92576388735699999-981880--------------364155--43567-------7889997
Q T0636 85 AE---F------SS-MRFVTAWPGFDGYRARI-AVSGLR--------------HFEIGL--TDDLL-------LDPNDLA 130 (336)
Q Consensus 85 ~~---~------~~-~~vii~~P~y~~y~~~~-~~~g~~--------------~~~vp~--~~~~~-------~d~~~l~ 130 (336)
.. + ++ ..|+....+|-+....+ ...+.. ....+. ..++. -+.+.++
T Consensus 122 k~ar~~~~~~g~~~r~~ii~~~~~yHG~t~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 201 (448)
T 3dod_A 122 KMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELA 201 (448)
T ss_dssp HHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999887538988647999807858986775424567443357777543332345311125677983778999999999
Q ss_pred HHC---CHH--HHHHHCC-CCCCCCCCCH----HHHHHHHHHCCCC-CCCCCCCCCCCCCC----CHHHHCCCHHHHHHH
Q ss_conf 300---024--3133036-6332222237----9999999737872-02521002588662----003324520012023
Q T0636 131 QVS---RDD--CVVLANP-SNPTGQALSA----GELDQLRQRAGKL-LIDETYVDYSSFRA----RGLAYGENELVFRSF 195 (336)
Q Consensus 131 ~~~---~~~--~i~l~nP-nNPTG~~~~~----~~l~~l~~~~~~~-IvDeaY~~f~~~~~----~~l~~~~n~iv~~S~ 195 (336)
+.. ..+ ++++--| ..-.|..... ++|.+++++++.+ |+||++..|+..-. ......|+++ ++
T Consensus 202 ~~~~~~~~~iaAviie~~i~g~~G~~~~~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~~~~gv~PDiv---~~ 278 (448)
T 3dod_A 202 QLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM---AA 278 (448)
T ss_dssp HHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EE
T ss_pred HHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEECCCCCCHHCCCCCCCEE---EE
T ss_conf 999854898327999866634889757998999999999755582177203200640136774042089999989---86
Q ss_pred HHHHCCCCCCC-EEECCCHHHHHHHHHC---------CCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q ss_conf 46523343453-1311788999999733---------7877877778999999974599--9999999999999999999
Q T0636 196 SKSYGLAGLRL-GALFGPSELIAAMKRK---------QWFCNVGTLDLHALEAALDNDR--AREAHIAKTLAQRRRVADA 263 (336)
Q Consensus 196 SK~~gl~GlRi-G~~i~~~~~i~~l~~~---------~~~~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~r~~l~~~ 263 (336)
+|..| .|+-. +.+++.+++.+....- ..+|+-|.++..++.+.|+.-. .+.++.+..-+......+.
T Consensus 279 gK~l~-~G~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~atl~~i~~~~~~~~~~~~g~~l~~~l~~ 357 (448)
T 3dod_A 279 GKGIT-GGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD 357 (448)
T ss_dssp CGGGG-TTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHH-CCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 75121-79875368974388876502676323456677676877299999998776664035577888899999999999
Q ss_pred HHHCCC-EEECCCCCEEEEEC--------------CCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHH
Q ss_conf 985897-86169864788656--------------988999999987693896077888887478874---798999999
Q T0636 264 LRGLGY-RVASSEANFVLVEN--------------AAGERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRL 325 (336)
Q Consensus 264 l~~lg~-~~~~s~~~Fi~~~~--------------~~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l 325 (336)
|.+... .-....|.++-+.+ ..+..+...|.++|+++++.. +.+|++- -|++|++.+
T Consensus 358 l~~~~~v~~vrG~Gl~~~~el~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~~-----~~l~~~PpL~~t~~did~~ 432 (448)
T 3dod_A 358 LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-----DVIAFLPPLASTAEELSEM 432 (448)
T ss_dssp HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-----TEEEECCCTTCCHHHHHHH
T ss_pred HHCCCCEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECC-----CEEEEECCCCCCHHHHHHH
T ss_conf 86299878984142599999823765466663038999999999996893895149-----9999979948889999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999842
Q T0636 326 LAALAEYSDH 335 (336)
Q Consensus 326 ~~aL~~~~e~ 335 (336)
+++|++.+++
T Consensus 433 ~~~l~~al~~ 442 (448)
T 3dod_A 433 VAIMKQAIHE 442 (448)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 179
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.25 E-value=1.6e-09 Score=79.96 Aligned_cols=315 Identities=13% Similarity=0.091 Sum_probs=161.8
Q ss_pred CCCCCEECCCC--CCCCCC-CHHHHHHHHHHHHHH----HCC-----CCCCHHHHHHHHHHHHCCC-HHHEEEECCHHHH
Q ss_conf 66553573576--548887-689999999998750----058-----8986189999999984888-5438860778899
Q T0636 13 AAAQAVCLAFN--ENPEAV-EPRVQAAIAAAAARI----NRY-----PFDAEPRVMRKLAEHFSCP-EDNLMLVRGIDEC 79 (336)
Q Consensus 13 ~~~~~i~L~~N--enp~~p-~~~v~~al~~~~~~~----~~Y-----pd~~~~~Lr~aia~~~~v~-~d~I~~t~Gs~~~ 79 (336)
.+++.||+.++ -+.+|- .|.+.+|+.+.+..+ +.. +.....++-+.+++..+=+ -+.++.+++++|+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~SGsEA 131 (449)
T 2cjg_A 52 TGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALA 131 (449)
T ss_dssp TCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHH
T ss_pred CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCH
T ss_conf 99788885531887550679899999999999999998705677520239999999999986488666869963788707
Q ss_pred HHHHHHHH---C-------------CCCEEECCCCCHHHHHHH-HHHC-------------CCEEEECCCCCC-------
Q ss_conf 99999984---6-------------992576388735699999-9818-------------803641554356-------
Q T0636 80 FDRISAEF---S-------------SMRFVTAWPGFDGYRARI-AVSG-------------LRHFEIGLTDDL------- 122 (336)
Q Consensus 80 i~~~~~~~---~-------------~~~vii~~P~y~~y~~~~-~~~g-------------~~~~~vp~~~~~------- 122 (336)
....++.- . ...|+...-+|-+....+ ...+ ......|.....
T Consensus 132 ve~AlKlAr~~t~~~~~~~~~~~~~~~~ii~~~gsyHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 211 (449)
T 2cjg_A 132 VENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMA 211 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 88999999888740366555676667589992475157656311045788654456566556765543332222221033
Q ss_pred ---CCCHHHHHHH---CCHH-HHHHHCCC-CCCCC-CCCHH---HHHHHHHHCCCCC-CCCCCCCCCCCC----CCHHHH
Q ss_conf ---7788999730---0024-31330366-33222-22379---9999997378720-252100258866----200332
Q T0636 123 ---LLDPNDLAQV---SRDD-CVVLANPS-NPTGQ-ALSAG---ELDQLRQRAGKLL-IDETYVDYSSFR----ARGLAY 185 (336)
Q Consensus 123 ---~~d~~~l~~~---~~~~-~i~l~nPn-NPTG~-~~~~~---~l~~l~~~~~~~I-vDeaY~~f~~~~----~~~l~~ 185 (336)
.-+++++++. ...+ +.++..|= .-.|. ..+.+ .+.+++++++.++ +||++..|...- ......
T Consensus 212 ~~~~~~l~~l~~~l~~~~~~iAAvi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfgrtG~~~~~~~~~v 291 (449)
T 2cjg_A 212 ALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV 291 (449)
T ss_dssp HHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 44566777766666417875468994034555544430677777899999876145003115432334665442123443
Q ss_pred CCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHH--HCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHH-HHHHH
Q ss_conf 45200120234652334345313117889999997--337877877778999999974599--99999999999-99999
Q T0636 186 GENELVFRSFSKSYGLAGLRLGALFGPSELIAAMK--RKQWFCNVGTLDLHALEAALDNDR--AREAHIAKTLA-QRRRV 260 (336)
Q Consensus 186 ~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l~--~~~~~~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~-~r~~l 260 (336)
.|+++ ++||..+..+.-+|.++.......... ....+|+-|.++..++.+.|+.-+ .+.+..++.-+ -+++|
T Consensus 292 ~PDiv---~~gK~l~~G~~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~~~~~~~~~~~~~~g~~l~~~L 368 (449)
T 2cjg_A 292 APDIV---AFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARL 368 (449)
T ss_dssp CCSEE---EECGGGSSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCCHH---HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 55256---553102444201245666666540367743223334443222220333210000025778999999999999
Q ss_pred HHHHHHCC--CEEECCCCCEEEEECCC---HHHHHHHHHHCCCEEEECCCCCCCCEEEEEE---CCHHHHHHHHHHHHHH
Q ss_conf 99998589--78616986478865698---8999999987693896077888887478874---7989999999999999
Q T0636 261 ADALRGLG--YRVASSEANFVLVENAA---GERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDNDRLLAALAEY 332 (336)
Q Consensus 261 ~~~l~~lg--~~~~~s~~~Fi~~~~~~---~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~---~~~ee~~~l~~aL~~~ 332 (336)
.+..++.. +.-..+.|.++-+++++ .+++.+.|.++||+++++. .+.||++- -|++|++.++++|++.
T Consensus 369 ~~l~~~~p~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g----~~~ir~~Ppl~it~~~id~~l~~l~~a 444 (449)
T 2cjg_A 369 DELAADFPAVVLDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAG----ADTVRFRPPLTVSTAEIDAAIAAVRSA 444 (449)
T ss_dssp HHHHHHSTTTSEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9998568883477630457999993783029999999997894891169----998999698478999999999999999
Q ss_pred HH
Q ss_conf 84
Q T0636 333 SD 334 (336)
Q Consensus 333 ~e 334 (336)
.+
T Consensus 445 l~ 446 (449)
T 2cjg_A 445 LP 446 (449)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 180
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster}
Probab=99.21 E-value=1.5e-07 Score=67.21 Aligned_cols=277 Identities=13% Similarity=0.091 Sum_probs=155.5
Q ss_pred HHHHHHHHHCCCHH---------HEEEECCHHHHHHHHHHHH-----C-----C----------C-CEEECCCCCHHHHH
Q ss_conf 99999998488854---------3886077889999999984-----6-----9----------9-25763887356999
Q T0636 55 VMRKLAEHFSCPED---------NLMLVRGIDECFDRISAEF-----S-----S----------M-RFVTAWPGFDGYRA 104 (336)
Q Consensus 55 Lr~aia~~~~v~~d---------~I~~t~Gs~~~i~~~~~~~-----~-----~----------~-~vii~~P~y~~y~~ 104 (336)
..+.+++.+|.+.+ .-++|.|++++....+.+. + + + .|++.+-+=.....
T Consensus 118 v~~wl~~l~g~p~~~~~~~~~~~~g~~t~Ggs~anl~al~~AR~~~~~~~~~~~~~~~~~~~~~~~vv~~S~~aH~Sv~K 197 (475)
T 3k40_A 118 MMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVER 197 (475)
T ss_dssp HHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHH
T ss_pred HHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHH
T ss_conf 99999998569767635688877773167899999999999999987886531866322246676699973333899999
Q ss_pred HHHHHCCCEEEECCCCCCCCCHHHHHHHCCH-----H---HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC-CCCCCCCC
Q ss_conf 9998188036415543567788999730002-----4---3133036633222223799999997378720-25210025
Q T0636 105 RIAVSGLRHFEIGLTDDLLLDPNDLAQVSRD-----D---CVVLANPSNPTGQALSAGELDQLRQRAGKLL-IDETYVDY 175 (336)
Q Consensus 105 ~~~~~g~~~~~vp~~~~~~~d~~~l~~~~~~-----~---~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~I-vDeaY~~f 175 (336)
++...|+.+..++ ++++.+|++++++..+. + +|+.+-..-.||.+=+.++|.+++++++.++ ||.||..+
T Consensus 198 aa~~lGi~~~~~~-~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~tGaiD~l~~I~~i~~~~~~wlHVDaA~Gg~ 276 (475)
T 3k40_A 198 AGLLGGVKLRSVQ-SENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGS 276 (475)
T ss_dssp HHHHHTCEEEEEC-CBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred HHHHCCCCEEECC-CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHH
T ss_conf 9986797145045-888756789999999987746997537773158766754375999999998748649970231577
Q ss_pred CCCCC--CHHH-HCCCH-HHHHHHHHHHCCCCCCCEEEC-CCHHHH-HH-------HHHC-C----C--CCC--CCH---
Q ss_conf 88662--0033-24520-012023465233434531311-788999-99-------9733-7----8--778--777---
Q T0636 176 SSFRA--RGLA-YGENE-LVFRSFSKSYGLAGLRLGALF-GPSELI-AA-------MKRK-Q----W--FCN--VGT--- 230 (336)
Q Consensus 176 ~~~~~--~~l~-~~~n~-iv~~S~SK~~gl~GlRiG~~i-~~~~~i-~~-------l~~~-~----~--~~~--~~~--- 230 (336)
.-... ..+. .-+.. -+.-.+.|..++| .-+|.+. -++... .. +..- . + .++ .+.
T Consensus 277 ~~~~~~~r~~~~gi~~aDSit~d~HK~l~~P-~~~~~~l~rd~~~~~~~~~~~~~Yl~~~~~~~~~~~~~~~~~~sR~~~ 355 (475)
T 3k40_A 277 AFICPEYRHLMKGIESADSFNFNPHKWMLVN-FDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFR 355 (475)
T ss_dssp GGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESSGGGC---------------------------CCCGGGT
T ss_pred HHHCCCCHHHHCCCCHHEEEEECCCCCCCCC-CCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 7640101465438861105555630113567-664156743788876762267121065533566673334642365236
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-CCCCCEEEEECCCH----HHHHHHHHHCCC-EEEE
Q ss_conf -7899999997459999999999999999999999858-97861-69864788656988----999999987693-8960
Q T0636 231 -LDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEANFVLVENAAG----ERTLRFLRERGI-QVKD 302 (336)
Q Consensus 231 -~~~~aa~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~l-g~~~~-~s~~~Fi~~~~~~~----~~~~~~L~~~gi-~vr~ 302 (336)
+..-++...+ ..+-+.+.+++..+..+++.+.+++. ++.+. |++-|-+.++.... .++.+.|.+.|. ++.+
T Consensus 356 al~lw~~l~~~-G~~g~~~~i~~~~~~A~~l~~~l~~~~~fel~~~~~~~iV~Fr~~~~~~~n~~l~~~l~~~G~~~~s~ 434 (475)
T 3k40_A 356 ALKLWFVLRLY-GVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVP 434 (475)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEE
T ss_pred HHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 89999887430-76889999999999999999998359997996798557999982698588999999998459899830
Q ss_pred CCCCCCCCEEEEEEC----CHHHHHHHHHHHHHHHHC
Q ss_conf 778888874788747----989999999999999842
Q T0636 303 AGQFGLHHHIRISIG----REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 303 ~~~fg~~~~iRis~~----~~ee~~~l~~aL~~~~e~ 335 (336)
.. .+...++|++++ ++++++++++.+++.-++
T Consensus 435 t~-~~g~~~lR~~i~n~~t~~~did~~~~~i~~~a~~ 470 (475)
T 3k40_A 435 AK-IKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp EE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EE-ECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 25-9999899999689999999999999999999999
No 181
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomics initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus HB8} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.13 E-value=1.6e-07 Score=66.93 Aligned_cols=300 Identities=17% Similarity=0.144 Sum_probs=161.3
Q ss_pred CHHHHHHHHHHHHHHHCC-CCC---CHH-------HHHHHHHHHHCCCHHHEEEECCHHHHHH---HHHHHH--CCC---
Q ss_conf 689999999998750058-898---618-------9999999984888543886077889999---999984--699---
Q T0636 30 EPRVQAAIAAAAARINRY-PFD---AEP-------RVMRKLAEHFSCPEDNLMLVRGIDECFD---RISAEF--SSM--- 90 (336)
Q Consensus 30 ~~~v~~al~~~~~~~~~Y-pd~---~~~-------~Lr~aia~~~~v~~d~I~~t~Gs~~~i~---~~~~~~--~~~--- 90 (336)
+|.+.+.+.+ ....| |-. -.. ++-..|++..|.+.-|.-.-.|++.+-. ++.+.. .+.
T Consensus 79 ~P~v~~~~~~---~yTaYTPYQPaEiSQG~LQalfEfQtmi~eLTGMdvaNaS~yDgatA~aEA~~ma~r~~~~~~~~~~ 155 (474)
T 1wyu_B 79 NPKLHEEAAR---LFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRT 155 (474)
T ss_dssp CCHHHHHHHH---TTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTT
T ss_pred CCCCCCHHHH---HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 7302215788---8745498998577599999999999999999588855667611899999999987777764377532
Q ss_pred -CEEECCCCC-HHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHC--CHHHHHHHCCCCCCCCCCC-HHHHHHHHHHCC-
Q ss_conf -257638873-5699999981880364155435677889997300--0243133036633222223-799999997378-
Q T0636 91 -RFVTAWPGF-DGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVS--RDDCVVLANPSNPTGQALS-AGELDQLRQRAG- 164 (336)
Q Consensus 91 -~vii~~P~y-~~y~~~~~~~g~~~~~vp~~~~~~~d~~~l~~~~--~~~~i~l~nPnNPTG~~~~-~~~l~~l~~~~~- 164 (336)
.++...+.. ..+.......+..++.++...+...+.+.+.... ++..+++.+||+. |.+.. .+++..++++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~p~~~-g~~~~~~~~~~~~~~~~~~ 234 (474)
T 1wyu_B 156 RRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNPNTL-GLFERRILEISRLCKEAGV 234 (474)
T ss_dssp CCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSSCTT-SCCCTTHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCC-CCCCCHHHHHHHHHHHCCC
T ss_conf 444567753101001122024405630343100000124566654101335210257877-7544218899999875077
Q ss_pred CCCCCCCCCCCCCCCCCHHHHCCCHHHH---HHHHHHHCCCCCCCEEECCCHHHHHHH----------------HHCCCC
Q ss_conf 7202521002588662003324520012---023465233434531311788999999----------------733787
Q T0636 165 KLLIDETYVDYSSFRARGLAYGENELVF---RSFSKSYGLAGLRLGALFGPSELIAAM----------------KRKQWF 225 (336)
Q Consensus 165 ~~IvDeaY~~f~~~~~~~l~~~~n~iv~---~S~SK~~gl~GlRiG~~i~~~~~i~~l----------------~~~~~~ 225 (336)
.+++|-+-......-..+-......+++ .+|+=-.|..|--+|++...++++..+ .+.+..
T Consensus 235 ~~~~~~~~~~~~l~l~~pg~~g~d~iv~g~~q~~G~p~g~GGP~~G~~a~~~~l~R~~PGRivg~g~~~~~ltlqreq~i 314 (474)
T 1wyu_B 235 QLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSI 314 (474)
T ss_dssp EEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCC
T ss_pred CEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf 50454212244310446765346642122110003335667455304331033402588874204774444468876655
Q ss_pred --CCC--C-HH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCE---EEEECC---CHHHHHHH
Q ss_conf --787--7-77-8999999-9745999999999999999999999985897861698647---886569---88999999
Q T0636 226 --CNV--G-TL-DLHALEA-ALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANF---VLVENA---AGERTLRF 292 (336)
Q Consensus 226 --~~~--~-~~-~~~aa~~-~l~~~~~~~~~~~~~~~~r~~l~~~l~~lg~~~~~s~~~F---i~~~~~---~~~~~~~~ 292 (336)
.++ | .+ +..++.. ++-..+=+.+.-+....+.+++.+.|+..|++.... +.| +.++.+ +..++.+.
T Consensus 315 ~~~~~ctnqaL~al~a~vYl~~lG~~GL~~iA~~~~~~A~Yl~~~L~~~G~~~~~~-~~ff~EFv~~~~~~v~~~~i~k~ 393 (474)
T 1wyu_B 315 GRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRVPYD-GPSMHEFVAQPPEGFRALDLAKG 393 (474)
T ss_dssp CCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSC-SSCCSCEEEBCSTTCCHHHHHHH
T ss_pred CEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCEEEEEEECCCCCCCHHHHHHH
T ss_conf 30042230499999999999881856676757999999999999876549331556-65246752237889989999999
Q ss_pred HHHCCCEEEECCCC-C-CCCEEEEEEC---CHHHHHHHHHHHHHHHHC
Q ss_conf 98769389607788-8-8874788747---989999999999999842
Q T0636 293 LRERGIQVKDAGQF-G-LHHHIRISIG---REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 293 L~~~gi~vr~~~~f-g-~~~~iRis~~---~~ee~~~l~~aL~~~~e~ 335 (336)
|.++|++- +...| . .++.+=+++. |++|+|+|+++|++++++
T Consensus 394 L~~~G~~~-~~~~~P~~~~~~lli~vTE~~tkeeID~lv~aL~~i~~e 440 (474)
T 1wyu_B 394 LLELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp HHHTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred HHHCCCCC-CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 98659988-756676778996999727889999999999999999984
No 182
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- aminobutyric acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.08 E-value=5.8e-08 Score=69.86 Aligned_cols=310 Identities=12% Similarity=0.113 Sum_probs=157.7
Q ss_pred CCCCCEECCCCC--CCCC-CCHHHHHHHHHHHHHHH--CCC---CCCHHHHHHHHHHHHC-C---CHHHEEEECCHHHHH
Q ss_conf 665535735765--4888-76899999999987500--588---9861899999999848-8---854388607788999
Q T0636 13 AAAQAVCLAFNE--NPEA-VEPRVQAAIAAAAARIN--RYP---FDAEPRVMRKLAEHFS-C---PEDNLMLVRGIDECF 80 (336)
Q Consensus 13 ~~~~~i~L~~Ne--np~~-p~~~v~~al~~~~~~~~--~Yp---d~~~~~Lr~aia~~~~-v---~~d~I~~t~Gs~~~i 80 (336)
.+++.||+.++- +.+| -.|.+.+|+++...... ..+ ......+.+.+++.+. + ..+.++.+++++|+.
T Consensus 61 dG~~ylD~~~g~~~~~lGH~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~f~~sGsEA~ 140 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSCSN 140 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHHHH
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
T ss_conf 96999986338997766289399999999997351521143225554699999999999864776702488705750577
Q ss_pred HHHHHHH-----------------------------C-CCCEEECCCCCHHHHH-HHHHHCCC-----------EEEECC
Q ss_conf 9999984-----------------------------6-9925763887356999-99981880-----------364155
Q T0636 81 DRISAEF-----------------------------S-SMRFVTAWPGFDGYRA-RIAVSGLR-----------HFEIGL 118 (336)
Q Consensus 81 ~~~~~~~-----------------------------~-~~~vii~~P~y~~y~~-~~~~~g~~-----------~~~vp~ 118 (336)
...++.. . ...|+...-+|-+-.. +....+-. ....|.
T Consensus 141 e~AlklAr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~~yHG~T~gals~t~~~~~~~~~~~~~~~~~~~~ 220 (472)
T 1ohv_A 141 ENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPF 220 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89999999998750467542110001221100245788855999678617998764335687444445545667776677
Q ss_pred -----CCCCC---------CCHHHHHHH------CCHH-HHHHHCCC-CCCCCCCC-H---HHHHHHHHHCCCCC-CCCC
Q ss_conf -----43567---------788999730------0024-31330366-33222223-7---99999997378720-2521
Q T0636 119 -----TDDLL---------LDPNDLAQV------SRDD-CVVLANPS-NPTGQALS-A---GELDQLRQRAGKLL-IDET 171 (336)
Q Consensus 119 -----~~~~~---------~d~~~l~~~------~~~~-~i~l~nPn-NPTG~~~~-~---~~l~~l~~~~~~~I-vDea 171 (336)
...+. ...+++++. ...+ +.++.-|= .-.|.+.. + ++|.++|+++++++ +||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPiqg~gG~~~~~~~fl~~lr~lc~~~gillI~DEV 300 (472)
T 1ohv_A 221 PRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEV 300 (472)
T ss_dssp CCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECC
T ss_conf 76445532235553046789999999999997517885689997454256886776457789999999973881576246
Q ss_pred CCCCCCCCCCHH-H---HCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH-HHCCCCCCCCHHHHHHHHHHHHHHH--
Q ss_conf 002588662003-3---24520012023465233434531311788999999-7337877877778999999974599--
Q T0636 172 YVDYSSFRARGL-A---YGENELVFRSFSKSYGLAGLRLGALFGPSELIAAM-KRKQWFCNVGTLDLHALEAALDNDR-- 244 (336)
Q Consensus 172 Y~~f~~~~~~~l-~---~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~i~~l-~~~~~~~~~~~~~~~aa~~~l~~~~-- 244 (336)
...|+..-.... . ..+. ..+-+++|..+. |+......+...- .....+|+-|.++..++.+.|+.-+
T Consensus 301 ~tG~GRtG~~~a~e~~gv~pd-pdi~~~gkgl~~-----g~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~ 374 (472)
T 1ohv_A 301 QTGGGSTGKFWAHEHWGLDDP-ADVMTFSKKMMT-----GGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKRE 374 (472)
T ss_dssp TTTTTTTSSSSGGGGGCCSSC-CSEEEECGGGSS-----EEEEECGGGSCSSSSSSCCSSSSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCHHHHCCCCCC-CCCCCCCCCCCC-----CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 457876657322332386514-664010135542-----32245541035555433345788779987553377787052
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HHCC--CEEECCCCCEEEEECCCH---HHHHHHHHHCCCEEEECCCCCCCCEEEEE
Q ss_conf 99999999999999999999----8589--786169864788656988---99999998769389607788888747887
Q T0636 245 AREAHIAKTLAQRRRVADAL----RGLG--YRVASSEANFVLVENAAG---ERTLRFLRERGIQVKDAGQFGLHHHIRIS 315 (336)
Q Consensus 245 ~~~~~~~~~~~~r~~l~~~l----~~lg--~~~~~s~~~Fi~~~~~~~---~~~~~~L~~~gi~vr~~~~fg~~~~iRis 315 (336)
.+.+++++ .-+++.+.| ++.. +.-..+.|.|+-+++++. .++.+.+.++|++++++. ++.||+.
T Consensus 375 ~l~~~~~~---~g~~l~~~L~~l~~~~~~~i~~VRG~Gl~~~ie~~~~~~~~~~~~~~~~~Gll~~~~g----~~~lr~~ 447 (472)
T 1ohv_A 375 DLLSNAAH---AGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG----DKSIRFR 447 (472)
T ss_dssp THHHHHHH---HHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEEC
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHCCEEEEECC----CCEEEEE
T ss_conf 69999999---9999999999998568883677762238999982887999999999996995995179----9989994
Q ss_pred E---CCHHHHHHHHHHHHHHHHC
Q ss_conf 4---7989999999999999842
Q T0636 316 I---GREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 316 ~---~~~ee~~~l~~aL~~~~e~ 335 (336)
- -+++|++.++++|++.+.+
T Consensus 448 PpL~it~~ei~~~l~~l~~~l~e 470 (472)
T 1ohv_A 448 PTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99778999999999999999996
No 183
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomics, structural genomics consortium, SGC, alternative splicing, amino-acid biosynthesis; HET: PLP; 2.50A {Homo sapiens}
Probab=98.80 E-value=9.5e-07 Score=61.99 Aligned_cols=304 Identities=13% Similarity=0.079 Sum_probs=140.8
Q ss_pred CEECCCCCCCCC---CCHHHHHHHHHHHHHHH--CC-----CCCC------HHHHHHHHHHHHCCCHH-HEEEEC-CHHH
Q ss_conf 357357654888---76899999999987500--58-----8986------18999999998488854-388607-7889
Q T0636 17 AVCLAFNENPEA---VEPRVQAAIAAAAARIN--RY-----PFDA------EPRVMRKLAEHFSCPED-NLMLVR-GIDE 78 (336)
Q Consensus 17 ~i~L~~Nenp~~---p~~~v~~al~~~~~~~~--~Y-----pd~~------~~~Lr~aia~~~~v~~d-~I~~t~-Gs~~ 78 (336)
-++|.. ||-|- .|..|++.+++.+-+.+ +. .+++ ..+.++.+.+.++++.+ .|++.. |++.
T Consensus 10 ~~~~~~-~~~~~~s~lP~~vl~~~~~~~~~~~~~g~sileisHRs~eF~~l~~~~~~~Lr~ll~~p~~y~vl~l~GsgT~ 88 (377)
T 3e77_A 10 GVDLGT-ENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCG 88 (377)
T ss_dssp -----C-CCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred CCCCCC-HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHH
T ss_conf 556561-3444411398999999999986137988531126889878999999999999999689999779998885899
Q ss_pred HHHHHHHHHC--CC--CEEECCCCCHHHHHHHHHHCCCEEE--ECC-CCCCCCCHHHHHHHCCHHHHHHHC-CCC-CCCC
Q ss_conf 9999999846--99--2576388735699999981880364--155-435677889997300024313303-663-3222
Q T0636 79 CFDRISAEFS--SM--RFVTAWPGFDGYRARIAVSGLRHFE--IGL-TDDLLLDPNDLAQVSRDDCVVLAN-PSN-PTGQ 149 (336)
Q Consensus 79 ~i~~~~~~~~--~~--~vii~~P~y~~y~~~~~~~g~~~~~--vp~-~~~~~~d~~~l~~~~~~~~i~l~n-PnN-PTG~ 149 (336)
++.++...+. ++ .+.+..=+.... .+++.++..... +.. .......++...........++.+ -++ -+|.
T Consensus 89 a~ea~~~nl~~~~~~~~v~~~~~G~~~~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 167 (377)
T 3e77_A 89 QFSAVPLNLIGLKAGRCADYVVTGAWSA-KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGV 167 (377)
T ss_dssp HHHHHHHHHGGGSTTCEEEECCCSHHHH-HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTE
T ss_pred HHHHHHHHCCCCCCCCEEEEEEECHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCEEEECC
T ss_conf 9999999632446776889997886999-999999872865313420014655677676436877447640455036513
Q ss_pred CCCHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCHHH-------------
Q ss_conf 2237999999973-78720252100258866200332452001202346523343453131178899-------------
Q T0636 150 ALSAGELDQLRQR-AGKLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSEL------------- 215 (336)
Q Consensus 150 ~~~~~~l~~l~~~-~~~~IvDeaY~~f~~~~~~~l~~~~n~iv~~S~SK~~gl~GlRiG~~i~~~~~------------- 215 (336)
... .+.+. ...+|||.+ ..|+..+... ... + +++-|-.|.+|+||. +++++.++..
T Consensus 168 ~~~-----~~~~~~~~~liVD~v-Ss~g~~pid~-~~~-D-v~~a~sQK~lg~pgg-~~~i~~s~~~~~~~~~~~~~~~y 237 (377)
T 3e77_A 168 EFD-----FIPDVKGAVLVCDMS-SNFLSKPVDV-SKF-G-VIFAGAQKNVGSAGV-TVVIVRDDLLGFALRECPSVLEY 237 (377)
T ss_dssp ECS-----SCCCCTTCCEEEECT-TTTTSSCCCG-GGC-S-EEEEEGGGTTSCTTC-EEEEEETTSCSCCCTTSCGGGCH
T ss_pred EEE-----EECCCCCCEEEEECC-CHHCCCCCCC-CCE-E-EEEEECCCCCCCCCC-EEEEEEHHHHHHCCCCCCCHHHH
T ss_conf 033-----203788862776325-2003666667-740-3-999833101488884-59998647532113457603667
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEEC------CCCCEEEEECCC
Q ss_conf 999973378778777789999999745---99999999999999999999998589-78616------986478865698
Q T0636 216 IAAMKRKQWFCNVGTLDLHALEAALDN---DRAREAHIAKTLAQRRRVADALRGLG-YRVAS------SEANFVLVENAA 285 (336)
Q Consensus 216 i~~l~~~~~~~~~~~~~~~aa~~~l~~---~~~~~~~~~~~~~~r~~l~~~l~~lg-~~~~~------s~~~Fi~~~~~~ 285 (336)
.....+...+++.++....+...+|+. ..-++...++..+..+.+.+.++..+ +...+ |..+ +.+++++
T Consensus 238 ~~~~~~~s~~~Tpp~~~i~~l~~~L~~~~~~Gg~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~RS~t~-v~f~~~~ 316 (377)
T 3e77_A 238 KVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMN-IPFRIGN 316 (377)
T ss_dssp HHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSE-EEEEESS
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCE-EEEECCC
T ss_conf 776532221578876459999999999876076789999999999999999862576445778965578887-8997179
Q ss_pred ---HH----HHHHHHHHCCCEEEECCCCCCCCEEEEEE-C--CHHHHHHHHHHHHHHHHC
Q ss_conf ---89----99999987693896077888887478874-7--989999999999999842
Q T0636 286 ---GE----RTLRFLRERGIQVKDAGQFGLHHHIRISI-G--REEDNDRLLAALAEYSDH 335 (336)
Q Consensus 286 ---~~----~~~~~L~~~gi~vr~~~~fg~~~~iRis~-~--~~ee~~~l~~aL~~~~e~ 335 (336)
.+ ...+.+.++|+..-.| .+.-+.+|||. + +.|++++|++.|++|.++
T Consensus 317 ~~~~~~l~~~fl~~~~~~G~~~lkG--hr~vgg~RIs~~~ai~~e~v~~L~~~m~~f~~~ 374 (377)
T 3e77_A 317 AKGDDALEKRFLDKALELNMLSLKG--HRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp TTCCHHHHHHHHHHHHHTTEESCBC--CTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCC--CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8653789999999999778824668--775776789826878999999999999999997
No 184
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycoprotein; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=51.68 E-value=6.1 Score=17.89 Aligned_cols=13 Identities=8% Similarity=-0.046 Sum_probs=6.2
Q ss_pred CCCEEEECCCCCC
Q ss_conf 8803641554356
Q T0636 110 GLRHFEIGLTDDL 122 (336)
Q Consensus 110 g~~~~~vp~~~~~ 122 (336)
|..++-+..++++
T Consensus 149 GGPVI~vQiENEY 161 (971)
T 1tg7_A 149 GGPIILYQPENEY 161 (971)
T ss_dssp TSSEEEECCSSCC
T ss_pred CCCEEEEEECCCC
T ss_conf 9978999976678
No 185
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=49.16 E-value=9.1 Score=16.73 Aligned_cols=21 Identities=5% Similarity=0.099 Sum_probs=10.5
Q ss_pred HHHEEEECCH--HHHHHHHHHHH
Q ss_conf 5438860778--89999999984
Q T0636 67 EDNLMLVRGI--DECFDRISAEF 87 (336)
Q Consensus 67 ~d~I~~t~Gs--~~~i~~~~~~~ 87 (336)
+--+++|.|. ..++..+..++
T Consensus 74 ~~v~~~tsGpg~~N~~~av~eA~ 96 (566)
T 1ozh_A 74 AGVALVTSGPGCSNLITGMATAN 96 (566)
T ss_dssp CEEEEECSTHHHHTTHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHH
T ss_conf 88999831678999999999999
No 186
>2ez9_A Pyruvate oxidase; TPP enzyme, reaction intermediate analogue, oxidoreductase; HET: TDK FAD; 1.60A {Lactobacillus plantarum} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1y9d_A* 1pow_A* 1pox_A*
Probab=44.09 E-value=13 Score=15.70 Aligned_cols=18 Identities=28% Similarity=0.333 Sum_probs=10.8
Q ss_pred CCCCCHHHHHHHHHHCCC
Q ss_conf 222237999999973787
Q T0636 148 GQALSAGELDQLRQRAGK 165 (336)
Q Consensus 148 G~~~~~~~l~~l~~~~~~ 165 (336)
|.....+++.+|+++.++
T Consensus 222 g~~~a~~~l~~lae~l~i 239 (603)
T 2ez9_A 222 GARKAGKELEQLSKTLKI 239 (603)
T ss_dssp GGTTCHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHCC
T ss_conf 465899999999999799
No 187
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structural genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=43.36 E-value=11 Score=16.19 Aligned_cols=111 Identities=15% Similarity=0.173 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHH--CCCHHH-EEEECCHHHHHHHHHHHH--CCCCEEECCCCCHHHHHHHHHHCCCEEEECCCC--CCCC
Q ss_conf 189999999984--888543-886077889999999984--699257638873569999998188036415543--5677
Q T0636 52 EPRVMRKLAEHF--SCPEDN-LMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLL 124 (336)
Q Consensus 52 ~~~Lr~aia~~~--~v~~d~-I~~t~Gs~~~i~~~~~~~--~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~--~~~~ 124 (336)
..++++.+|..- -|.+.. |=++.||+-... ...+ .........|+-......++..|.++..+...+ |+.+
T Consensus 9 ~~~~K~~aA~~A~~~V~~gmvIGLGtGSTv~~~--i~~L~~~~~~~~~vv~tS~~t~~~~~~~Gi~l~~l~~~~~iDl~i 86 (224)
T 3kwm_A 9 QDELKKLAATEAAKSITTEITLGVGTGSTVGFL--IEELVNYRDKIKTVVSSSEDSTRKLKALGFDVVDLNYAGEIDLYI 86 (224)
T ss_dssp HHHHHHHHHHHHHTTCCSSEEEEECCSHHHHHH--HHHGGGCTTTEEEEEESCHHHHHHHHHTTCCBCCHHHHCSEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH--HHHHHHCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEE
T ss_conf 999999999999975589999983777999999--999996056787586085999999997599856766178258999
Q ss_pred CHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 88999730002431330366332222237999999973787202521
Q T0636 125 DPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDET 171 (336)
Q Consensus 125 d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~IvDea 171 (336)
| ..-+ ...++-.+= =-|..+.+|.+.+-+.+.-++|+||.
T Consensus 87 D--GaDe-vd~~l~lIK----GGGgall~EKivA~~a~~~iii~Des 126 (224)
T 3kwm_A 87 D--GADE-CNNHKELIK----GGGAALTREKICVAAAKKFICIIDES 126 (224)
T ss_dssp E--CCSE-ECTTSCEEC----CSSSCHHHHHHHHHTEEEEEEEEEGG
T ss_pred E--CCHH-HCCCCCEEE----CCCHHHHHHHHHHHHHHCEEEEECCC
T ss_conf 7--7221-187756883----27167999999999621279996632
No 188
>1wi3_A DNA-binding protein SATB2; homeodomain, helix-turn-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=37.77 E-value=16 Score=15.07 Aligned_cols=39 Identities=10% Similarity=0.307 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHE
Q ss_conf 768999999999875005889861899999999848885438
Q T0636 29 VEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNL 70 (336)
Q Consensus 29 p~~~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~v~~d~I 70 (336)
..+.-++.|.....+.+.||+. +-++.||..+|+++.+|
T Consensus 14 ~t~~q~~~Le~~F~~~~~~P~~---~~~~~La~~~gl~~~qI 52 (71)
T 1wi3_A 14 ISLEALGILQSFIHDVGLYPDQ---EAIHTLSAQLDLPKHTI 52 (71)
T ss_dssp CCSHHHHHHHHHHHHHCSCCCH---HHHHHHHHHSCCCHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCH---HHHHHHHHHHCCCHHHH
T ss_conf 7999999999999982677889---99999987827889999
No 189
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=35.65 E-value=18 Score=14.86 Aligned_cols=138 Identities=12% Similarity=0.110 Sum_probs=63.4
Q ss_pred CCCCHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHCCC-HHHEE-EECCHH-HHHHHHHHHHC-CCCEEECCCCCHH
Q ss_conf 887689999999998750058-8986189999999984888-54388-607788-99999999846-9925763887356
Q T0636 27 EAVEPRVQAAIAAAAARINRY-PFDAEPRVMRKLAEHFSCP-EDNLM-LVRGID-ECFDRISAEFS-SMRFVTAWPGFDG 101 (336)
Q Consensus 27 ~~p~~~v~~al~~~~~~~~~Y-pd~~~~~Lr~aia~~~~v~-~d~I~-~t~Gs~-~~i~~~~~~~~-~~~vii~~P~y~~ 101 (336)
+.|++.+.+.+.+...+...- +.+...++...++...+.. +.+|+ ++.|+- ..+.+ +++++ +.++...++. +.
T Consensus 15 ~~~~~~~l~~~~~~a~~~g~~~~~~~~g~~l~~L~~~~~~~~~~~vlEiGt~~G~Stl~l-a~al~~~G~l~tID~~-~e 92 (221)
T 3dr5_A 15 TTETDAAVARAREDAAEFGLPAPDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYI-LNGLADNTTLTCIDPE-SE 92 (221)
T ss_dssp TSCCCHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHH-HHHSCTTSEEEEECSC-HH
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH-HHHCCCCCEEEEEECC-HH
T ss_conf 189989999999999981999988529999999999853448988999757546999999-9847999889999778-89
Q ss_pred HH----HHHHHHCCC--EEEECCCCCCCCCHH-HHHHHCC--HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99----999981880--364155435677889-9973000--24313303663322222379999999737872025210
Q T0636 102 YR----ARIAVSGLR--HFEIGLTDDLLLDPN-DLAQVSR--DDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETY 172 (336)
Q Consensus 102 y~----~~~~~~g~~--~~~vp~~~~~~~d~~-~l~~~~~--~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~IvDeaY 172 (336)
+. ..++..|.. .+.+-.. |.. .+.+... -++||+- .++....---+...++++.++.+|+|.++
T Consensus 93 ~~~~Ar~~~~~ag~~~~ri~~i~g-----da~e~L~~l~~~~fDlIfiD--~~k~~y~~~~~~~~~lLrpGG~lv~Dnvl 165 (221)
T 3dr5_A 93 HQRQAKALFREAGYSPSRVRFLLS-----RPLDVMSRLANDSYQLVFGQ--VSPMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECS-----CHHHHGGGSCTTCEEEEEEC--CCTTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEC-----CHHHHHHHHCCCCCCEEEEC--CCHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 999999999975997631489967-----68999997243677789982--87788899999999856799689996676
Q ss_pred C
Q ss_conf 0
Q T0636 173 V 173 (336)
Q Consensus 173 ~ 173 (336)
.
T Consensus 166 ~ 166 (221)
T 3dr5_A 166 L 166 (221)
T ss_dssp G
T ss_pred C
T ss_conf 6
No 190
>1ynf_A Succinylarginine dihydrolase; 1.90A {Escherichia coli} SCOP: d.126.1.7 PDB: 1ynh_A* 1yni_A*
Probab=35.47 E-value=18 Score=14.84 Aligned_cols=30 Identities=33% Similarity=0.484 Sum_probs=21.2
Q ss_pred CCCCCEEEEEE-CCHHH----------HHHHHHHHHHHHHC
Q ss_conf 88887478874-79899----------99999999999842
Q T0636 306 FGLHHHIRISI-GREED----------NDRLLAALAEYSDH 335 (336)
Q Consensus 306 fg~~~~iRis~-~~~ee----------~~~l~~aL~~~~e~ 335 (336)
-|.|-|+|+-| -+++| ++.+.+.|+.|.++
T Consensus 371 GGGPACLRLRVvLn~~E~~avn~~~lm~~~l~~~L~~wV~~ 411 (458)
T 1ynf_A 371 GGGPACLRLRVVLTEEERRAVNPAVMMNDTLFNALNDWVDR 411 (458)
T ss_dssp TCCTTTTEEEEEECHHHHHHSCGGGBCSHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEEECCHHHHHHCCCCEECCHHHHHHHHHHHHH
T ss_conf 89762221533267899972596633389999999999998
No 191
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=32.43 E-value=20 Score=14.52 Aligned_cols=11 Identities=9% Similarity=-0.052 Sum_probs=5.1
Q ss_pred CCCCEEECCCC
Q ss_conf 69925763887
Q T0636 88 SSMRFVTAWPG 98 (336)
Q Consensus 88 ~~~~vii~~P~ 98 (336)
.|..|++..|.
T Consensus 110 ~GkhV~~EKP~ 120 (357)
T 3ec7_A 110 ANKYVFCEKPL 120 (357)
T ss_dssp TTCEEEEESSS
T ss_pred CCCEEEEECCC
T ss_conf 28879995883
No 192
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=32.17 E-value=20 Score=14.50 Aligned_cols=13 Identities=15% Similarity=0.473 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999984
Q T0636 322 NDRLLAALAEYSD 334 (336)
Q Consensus 322 ~~~l~~aL~~~~e 334 (336)
.+.|++.++++++
T Consensus 366 f~~F~~~i~~~kk 378 (379)
T 1a9x_B 366 FDHFIELIEQYRK 378 (379)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999998707
No 193
>3fym_A Putative uncharacterized protein; HTH DNA binding, DNA binding protein; 1.00A {Staphylococcus aureus subsp}
Probab=32.15 E-value=12 Score=15.90 Aligned_cols=42 Identities=14% Similarity=0.235 Sum_probs=19.7
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHCCCHHHE
Q ss_conf 88768999999999875005889861-899999999848885438
Q T0636 27 EAVEPRVQAAIAAAAARINRYPFDAE-PRVMRKLAEHFSCPEDNL 70 (336)
Q Consensus 27 ~~p~~~v~~al~~~~~~~~~Ypd~~~-~~Lr~aia~~~~v~~d~I 70 (336)
+..++..++++.+. +....|++.+ ....+.+|+++|++++.+
T Consensus 26 l~I~~~~l~aiE~~--~~~~~p~~~~~~g~lr~yA~~L~ld~~~l 68 (130)
T 3fym_A 26 TGIKREMLVHIENN--EFDQLPNKNYSEGFIRKYASVVNIEPNQL 68 (130)
T ss_dssp HCCCHHHHHHHHTT--CGGGSSSGGGHHHHHHHHHHHTTCCHHHH
T ss_pred HCCCHHHHHHHHCC--CCCCCCCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 29899999999858--96546431699999999999959599999
No 194
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=29.80 E-value=22 Score=14.24 Aligned_cols=18 Identities=22% Similarity=0.209 Sum_probs=8.2
Q ss_pred HHCCCCCCHHHHHHHHHH
Q ss_conf 005889861899999999
Q T0636 44 INRYPFDAEPRVMRKLAE 61 (336)
Q Consensus 44 ~~~Ypd~~~~~Lr~aia~ 61 (336)
+..+|-.....|.+++.+
T Consensus 100 VFg~PG~~~~~l~dal~~ 117 (677)
T 1t9b_A 100 VFGYPGGAILPVYDAIHN 117 (677)
T ss_dssp EEECCCGGGHHHHHHTTT
T ss_pred EEECCCCCHHHHHHHHHH
T ss_conf 998478047999999975
No 195
>3fk5_A 3-oxoacyl-synthase III; bacterial blight, XOO4209, FABH, xanthomonas oryzae PV. oryzae KACC10331, cytoplasm, multifunctional enzyme; 2.05A {Xanthomonas oryzae PV}
Probab=28.57 E-value=23 Score=14.11 Aligned_cols=34 Identities=6% Similarity=0.032 Sum_probs=14.7
Q ss_pred CCCCHHHHHHHHHHHHCCCHHH--EEEECCHHHHHH
Q ss_conf 8986189999999984888543--886077889999
Q T0636 48 PFDAEPRVMRKLAEHFSCPEDN--LMLVRGIDECFD 81 (336)
Q Consensus 48 pd~~~~~Lr~aia~~~~v~~d~--I~~t~Gs~~~i~ 81 (336)
||.-.+.+-..++..+|++.+. .-++.|+...+.
T Consensus 93 ~~~~~Ps~a~~v~~~LGl~~~~~~~di~~~C~g~~~ 128 (338)
T 3fk5_A 93 RDYLEPSTASIVSGNLGVGDHCVTFDVANACLAFIN 128 (338)
T ss_dssp CSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHH
T ss_pred CCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
T ss_conf 898688699999998189998699975312679999
No 196
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1
Probab=27.74 E-value=24 Score=14.01 Aligned_cols=112 Identities=11% Similarity=0.054 Sum_probs=51.2
Q ss_pred HHHHHHHHHHH--CCCHHH-EEEECCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCEEEECCCC--CCCCCHH
Q ss_conf 89999999984--888543-886077889999999984699257638873569999998188036415543--5677889
Q T0636 53 PRVMRKLAEHF--SCPEDN-LMLVRGIDECFDRISAEFSSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPN 127 (336)
Q Consensus 53 ~~Lr~aia~~~--~v~~d~-I~~t~Gs~~~i~~~~~~~~~~~vii~~P~y~~y~~~~~~~g~~~~~vp~~~--~~~~d~~ 127 (336)
.++++..|+.- -|.+.. |-++.||+-....=...-.....+...|+-......++..|.++..+..-+ |..+|
T Consensus 4 ~~~K~~aA~~A~~~V~~gm~iGLGtGSTv~~~i~~L~~~~~~~~~~v~tS~~T~~~~~~~Gi~~~~l~~~~~iDi~iD-- 81 (219)
T 1m0s_A 4 LEMKKLAAQAALQYVKADRIVGVGSGSTVNCFIEALGTIKDKIQGAVAASKESEELLRKQGIEVFNANDVSSLDIYVD-- 81 (219)
T ss_dssp HHHHHHHHHHHGGGCCTTSEEEECCSHHHHHHHHHHHTTGGGSCEEEESSHHHHHHHHHTTCCBCCGGGCSCEEEEEE--
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEECC--
T ss_conf 999999999999767999999967669999999999863416715783778999999977997012433665552036--
Q ss_pred HHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 99730002431330366332222237999999973787202521
Q T0636 128 DLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDET 171 (336)
Q Consensus 128 ~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~~IvDea 171 (336)
..-+ ...++-.+- =-|..+.+|.+.+-+.+.-++|+||.
T Consensus 82 GADe-vd~~lnlIK----GgGgallrEKiva~~a~~~iiI~Des 120 (219)
T 1m0s_A 82 GADE-INPQKMMIK----GGGAALTREKIVAALAKKFICIVDSS 120 (219)
T ss_dssp CCSE-ECTTSCEEC----CTTSCHHHHHHHHHHEEEEEEEEEGG
T ss_pred CHHH-HCCCCCEEE----CCHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 5665-386868882----58199989899998340279995244
No 197
>1uhs_A HOP, homeodomain only protein; structural genomics, cardiac development, riken structural genomics/proteomics initiative, RSGI, transcription; NMR {Mus musculus} SCOP: a.4.1.1
Probab=27.29 E-value=24 Score=13.96 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHE
Q ss_conf 999999999875005889861899999999848885438
Q T0636 32 RVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNL 70 (336)
Q Consensus 32 ~v~~al~~~~~~~~~Ypd~~~~~Lr~aia~~~~v~~d~I 70 (336)
.=++.|...-...+.||+ ..-|+.||..+|+++.+|
T Consensus 11 ~Ql~~Le~~F~~~~~yP~---~~~r~~LA~~lgL~~~~V 46 (72)
T 1uhs_A 11 DQVEILEYNFNKVNKHPD---PTTLCLIAAEAGLTEEQT 46 (72)
T ss_dssp HHHHHHHHHHHSSCSSCC---HHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHCCCCCC---HHHHHHHHHHHCCCHHHH
T ss_conf 999999999986334389---999999999909969999
No 198
>1msk_A Cobalamin-dependent methionine synthase; methyltransferase, transferase, methionine biosynthesis, vitamin B12; HET: SAM; 1.80A {Escherichia coli K12} SCOP: d.173.1.1
Probab=26.72 E-value=3 Score=19.84 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=17.1
Q ss_pred CCEEECCCCCEEEEECCCHHHHHHHHH-HC--CCEEE
Q ss_conf 978616986478865698899999998-76--93896
Q T0636 268 GYRVASSEANFVLVENAAGERTLRFLR-ER--GIQVK 301 (336)
Q Consensus 268 g~~~~~s~~~Fi~~~~~~~~~~~~~L~-~~--gi~vr 301 (336)
|++.-++.- -+-++.+-..+++.|. ++ ||.+.
T Consensus 236 GiRpa~GYP--AcPdh~ek~~l~~LL~~e~~iGv~LT 270 (331)
T 1msk_A 236 GIRPAPGYP--ACPEHTEKATIWELLEVEKHTGMKLT 270 (331)
T ss_dssp CBCCCTTST--TSCCGGGHHHHHHHTTHHHHHCCEEC
T ss_pred CCCCCCCCC--CCCCHHHHHHHHHHHCHHHCCCEEEC
T ss_conf 778999978--99666777999986360212661776
No 199
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=23.66 E-value=28 Score=13.53 Aligned_cols=49 Identities=14% Similarity=0.240 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHC
Q ss_conf 889999999876938960778888874788747989999999999999842
Q T0636 285 AGERTLRFLRERGIQVKDAGQFGLHHHIRISIGREEDNDRLLAALAEYSDH 335 (336)
Q Consensus 285 ~~~~~~~~L~~~gi~vr~~~~fg~~~~iRis~~~~ee~~~l~~aL~~~~e~ 335 (336)
++....+.|++.|+-|.--...|..+.+.+ -.+++.+++++.+++|+++
T Consensus 281 e~~~~a~~L~~~Gv~v~~~~~~g~~H~F~~--~~p~~a~~~~~~i~~Fi~~ 329 (338)
T 2o7r_A 281 RQMELAERLEKKGVDVVAQFDVGGYHAVKL--EDPEKAKQFFVILKKFVVD 329 (338)
T ss_dssp HHHHHHHHHHHTTCEEEEEEESSCCTTGGG--TCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCEEECC--CCHHHHHHHHHHHHHHHHH
T ss_conf 999999999987996899998999866446--7939999999999999998
No 200
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, thiamin thiazolone diphosphate, inhibitor; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=22.81 E-value=30 Score=13.43 Aligned_cols=19 Identities=21% Similarity=0.232 Sum_probs=10.5
Q ss_pred EEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 478874798999999999999984
Q T0636 311 HIRISIGREEDNDRLLAALAEYSD 334 (336)
Q Consensus 311 ~iRis~~~~ee~~~l~~aL~~~~e 334 (336)
++|+ .+.+| |.++|++.++
T Consensus 494 ~~~v--~~~~e---l~~al~~a~~ 512 (528)
T 1q6z_A 494 ALKA--DNLEQ---LKGSLQEALS 512 (528)
T ss_dssp EEEE--SSHHH---HHHHHHHHHT
T ss_pred EEEE--CCHHH---HHHHHHHHHC
T ss_conf 9997--99999---9999999981
No 201
>1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydratase, fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} SCOP: d.38.1.6 PDB: 1zhg_A 2oki_A 2okh_A
Probab=21.38 E-value=26 Score=13.82 Aligned_cols=28 Identities=21% Similarity=0.400 Sum_probs=21.2
Q ss_pred CCCCCCCCCCHHHHHHHHH-HCCCCCCCCCC
Q ss_conf 6633222223799999997-37872025210
Q T0636 143 PSNPTGQALSAGELDQLRQ-RAGKLLIDETY 172 (336)
Q Consensus 143 PnNPTG~~~~~~~l~~l~~-~~~~~IvDeaY 172 (336)
||+|| .++.++|.++.. +.+.+.||.+-
T Consensus 5 ~~~~~--~~~~~eI~~llPhR~PfllvDri~ 33 (154)
T 1z6b_A 5 PNYDT--SIDIEDIKKILPHRYPFLLVDKVI 33 (154)
T ss_dssp ---CC--CBCHHHHHHHCCCCTTSCCCCEEE
T ss_pred CCCCC--CCCHHHHHHHCCCCCCEEEEEEEE
T ss_conf 99998--759999998679999847899999
No 202
>2kii_A Putative uncharacterized protein; H-NOX, unknown function; HET: HEM; NMR {Shewanella oneidensis} PDB: 2kil_A*
Probab=21.25 E-value=30 Score=13.36 Aligned_cols=31 Identities=13% Similarity=0.286 Sum_probs=21.3
Q ss_pred HCCCCCCHHHHHHHHHHHHCCCHHHEEEECC
Q ss_conf 0588986189999999984888543886077
Q T0636 45 NRYPFDAEPRVMRKLAEHFSCPEDNLMLVRG 75 (336)
Q Consensus 45 ~~Ypd~~~~~Lr~aia~~~~v~~d~I~~t~G 75 (336)
..|||..-..|.+++++..|.+.++++-.=|
T Consensus 40 ~~Y~D~~~~~Lv~a~s~~lg~~~~~ll~~fG 70 (181)
T 2kii_A 40 KSYAESELFSIVQDVAQRLNMPIQDVVKAFG 70 (181)
T ss_dssp CCTTTTHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 7108799999999999998979999999999
No 203
>2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12}
Probab=20.62 E-value=33 Score=13.14 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=33.9
Q ss_pred HHHHHHHHHHCCCHHHEEEECC----HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCEEEEC
Q ss_conf 9999999984888543886077----889999999984699257638873569999998188036415
Q T0636 54 RVMRKLAEHFSCPEDNLMLVRG----IDECFDRISAEFSSMRFVTAWPGFDGYRARIAVSGLRHFEIG 117 (336)
Q Consensus 54 ~Lr~aia~~~~v~~d~I~~t~G----s~~~i~~~~~~~~~~~vii~~P~y~~y~~~~~~~g~~~~~vp 117 (336)
+-.+++....+....-+++|+. =+.++.++.... ..+|++..|.........+..|..+..++
T Consensus 179 dQ~~~l~~l~~~~~~~~vitAdRGRGKSaalGla~a~~-~~~i~VTAP~~~~v~~lf~~a~~~i~f~~ 245 (671)
T 2zpa_A 179 EQQQLLKQLMTMPPGVAAVTAARGRGKSALAGQLISRI-AGRAIVTAPAKASTDVLAQFAGEKFRFIA 245 (671)
T ss_dssp HHHHHHHHHTTCCSEEEEEEECTTSSHHHHHHHHHHHS-SSCEEEECSSCCSCHHHHHHHGGGCCBCC
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH-CCCEEEECCCHHHHHHHHHHHCCCCEEEC
T ss_conf 99999999974357848998289885999999999851-79889989998999999997077871338
No 204
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, hydrolase; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=20.31 E-value=33 Score=13.10 Aligned_cols=69 Identities=16% Similarity=0.298 Sum_probs=33.4
Q ss_pred HHHHHHCCCEEEE-CCCC-------------CCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC-CCC
Q ss_conf 9999818803641-5543-------------567788999730002431330366332222237999999973787-202
Q T0636 104 ARIAVSGLRHFEI-GLTD-------------DLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLI 168 (336)
Q Consensus 104 ~~~~~~g~~~~~v-p~~~-------------~~~~d~~~l~~~~~~~~i~l~nPnNPTG~~~~~~~l~~l~~~~~~-~Iv 168 (336)
..++-.|+..+.+ |.-+ +|+.|+...-. +.--+=++|++|.|..-.-+++.+-|++.++ ||+
T Consensus 258 dYLk~LGvt~I~L~Pi~e~~~~d~~~~~~~~~wGYd~~~y~a---~~~~ygt~~~~~~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 258 AYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFA---PEGSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp HHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEE---ECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 799973987799568442256444578888887857440600---36763557556545499999999999877998998
Q ss_pred CCCCCCC
Q ss_conf 5210025
Q T0636 169 DETYVDY 175 (336)
Q Consensus 169 DeaY~~f 175 (336)
|-+|-.+
T Consensus 335 DvV~NH~ 341 (718)
T 2e8y_A 335 DVVFNHV 341 (718)
T ss_dssp EECTTCC
T ss_pred EEEECCC
T ss_conf 5742367
Done!