Query T0637 NP_249547.1, PSEUDOMONAS AERUGINOSA, 146 residues
Match_columns 146
No_of_seqs 110 out of 175
Neff 7.2
Searched_HMMs 15564
Date Thu Jul 22 15:02:50 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0637.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0637.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h1oa1 a.3.1.4 (A:12-93) Cyto 68.5 1.4 9E-05 21.4 2.1 25 69-93 50-74 (82)
2 d1m70a2 a.3.1.4 (A:93-190) Cyt 68.3 1.9 0.00012 20.6 2.7 23 71-93 74-96 (98)
3 d1fcdc2 a.3.1.4 (C:81-174) Fla 67.3 1.6 0.0001 21.1 2.1 26 68-93 67-92 (94)
4 d1fcdc1 a.3.1.4 (C:1-80) Flavo 65.0 2 0.00013 20.3 2.3 22 72-93 54-75 (80)
5 d1c53a_ a.3.1.1 (A:) Cytochrom 64.9 1.9 0.00012 20.5 2.2 25 69-93 54-78 (79)
6 d1cnoa_ a.3.1.1 (A:) Cytochrom 62.1 2.6 0.00017 19.6 2.4 23 71-93 59-81 (86)
7 d1iqca2 a.3.1.5 (A:151-308) Di 56.3 4.5 0.00029 18.0 2.8 22 76-97 114-135 (158)
8 d1h1oa2 a.3.1.4 (A:94-183) Cyt 55.8 3.3 0.00021 18.9 2.1 22 72-93 68-89 (90)
9 d1m70a1 a.3.1.4 (A:1-92) Cytoc 55.5 1.1 7.3E-05 22.0 -0.3 23 71-93 65-87 (92)
10 d1nmla2 a.3.1.5 (A:167-326) Di 52.1 3.6 0.00023 18.7 1.8 21 77-97 116-136 (160)
11 d2npta1 d.15.2.2 (A:4-108) Mit 43.4 5.3 0.00034 17.6 1.5 17 80-96 71-87 (105)
12 d1q08a_ a.6.1.3 (A:) Transcrip 43.4 9.7 0.00063 15.8 7.3 24 74-97 12-35 (94)
13 d2gsva1 a.23.7.1 (A:3-69) Hypo 42.2 9.9 0.00064 15.7 2.8 38 62-99 3-40 (67)
14 d1eb7a2 a.3.1.5 (A:165-323) Di 34.7 10 0.00065 15.7 1.9 22 77-98 118-139 (159)
15 d1ynra1 a.3.1.1 (A:1-80) Cytoc 33.3 11 0.00071 15.4 1.9 19 75-93 60-78 (80)
16 d1cora_ a.3.1.1 (A:) Cytochrom 32.3 12 0.00076 15.2 1.9 16 78-93 65-80 (82)
17 d1h32b_ a.3.1.1 (B:) Mono-heme 31.4 14 0.00089 14.8 2.1 18 76-93 118-135 (138)
18 d351ca_ a.3.1.1 (A:) Cytochrom 30.8 13 0.00082 15.0 1.9 16 78-93 65-80 (82)
19 d1kv9a1 a.3.1.6 (A:561-664) Qu 29.9 9.1 0.00058 16.0 1.0 30 72-101 73-102 (104)
20 d3c2ca_ a.3.1.1 (A:) Cytochrom 29.0 16 0.001 14.3 2.1 17 77-93 94-110 (112)
21 d1f1fa_ a.3.1.1 (A:) Cytochrom 27.6 9.4 0.0006 15.9 0.7 23 73-95 62-84 (88)
22 d2cqna1 a.159.2.1 (A:743-806) 27.6 16 0.0011 14.3 2.0 51 26-79 4-55 (64)
23 d1kb0a1 a.3.1.6 (A:579-675) Qu 27.1 6.3 0.00041 17.0 -0.2 23 72-94 69-91 (97)
24 d1ls9a_ a.3.1.1 (A:) Cytochrom 26.8 9.1 0.00059 16.0 0.5 25 72-96 63-87 (91)
25 d1lfma_ a.3.1.1 (A:) Mitochond 24.2 15 0.00099 14.5 1.3 20 75-94 82-101 (103)
26 d1cc5a_ a.3.1.1 (A:) Cytochrom 23.5 20 0.0013 13.6 1.8 18 76-93 65-82 (83)
27 d2qdya1 d.149.1.1 (A:10-206) I 22.1 19 0.0012 13.9 1.4 24 75-98 23-46 (197)
28 d1f1ca_ a.3.1.1 (A:) Photosyst 21.6 22 0.0014 13.4 1.6 17 77-93 103-119 (129)
29 d1gdva_ a.3.1.1 (A:) Cytochrom 21.5 14 0.00093 14.7 0.7 24 72-95 58-81 (85)
30 d1wvec1 a.3.1.1 (C:602-675) p- 21.1 19 0.0012 13.9 1.2 20 74-93 51-71 (74)
31 d1a56a_ a.3.1.1 (A:) Cytochrom 20.7 16 0.001 14.3 0.8 19 74-93 61-79 (81)
32 d1v29a_ d.149.1.1 (A:) Cobalt- 20.4 19 0.0012 13.8 1.2 28 75-102 28-59 (203)
33 d1twya_ c.94.1.1 (A:) ABC tran 20.4 24 0.0015 13.2 3.1 23 82-104 223-245 (249)
34 d1ctja_ a.3.1.1 (A:) Cytochrom 20.3 13 0.00085 14.9 0.3 24 73-96 62-85 (89)
35 d1cxca_ a.3.1.1 (A:) Cytochrom 20.1 21 0.0013 13.6 1.3 17 78-94 104-120 (124)
No 1
>d1h1oa1 a.3.1.4 (A:12-93) Cytochrome c4 {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=68.52 E-value=1.4 Score=21.43 Aligned_cols=25 Identities=4% Similarity=0.205 Sum_probs=20.6
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 9999999986178899999998548
Q T0637 69 PELIKLYTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 69 ~~~~~iY~~~fT~eEl~~liaFY~S 93 (146)
....+.+...||.+||.+|++|+.|
T Consensus 50 ~~~M~~~~~~LSd~eI~~la~Yi~s 74 (82)
T d1h1oa1 50 EIYMWPVAQALDSAKITALADYFNA 74 (82)
T ss_dssp HHHTHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHCCHHHHHHHHHHHHH
T ss_conf 0214387755799999999999982
No 2
>d1m70a2 a.3.1.4 (A:93-190) Cytochrome c4 {Pseudomonas stutzeri [TaxId: 316]}
Probab=68.34 E-value=1.9 Score=20.60 Aligned_cols=23 Identities=9% Similarity=0.420 Sum_probs=19.4
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 99999986178899999998548
Q T0637 71 LIKLYTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 71 ~~~iY~~~fT~eEl~~liaFY~S 93 (146)
+.+.+.+.||.+||+++++||.|
T Consensus 74 ~M~~~~~~lsd~di~~la~Yias 96 (98)
T d1m70a2 74 IMRGVAAKLSNKDIEALSSYIQG 96 (98)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 59999986999999999999987
No 3
>d1fcdc2 a.3.1.4 (C:81-174) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=67.34 E-value=1.6 Score=21.09 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 99999999986178899999998548
Q T0637 68 KPELIKLYTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 68 ~~~~~~iY~~~fT~eEl~~liaFY~S 93 (146)
.....+.+...+|.+||.+|++||.|
T Consensus 67 ~~~~M~~~~~~LSd~di~alaaY~~S 92 (94)
T d1fcdc2 67 MASKLRELLKAEGDAGLDALFAFYAS 92 (94)
T ss_dssp HHHHHHTTGGGSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 57889998852899999999999985
No 4
>d1fcdc1 a.3.1.4 (C:1-80) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=64.98 E-value=2 Score=20.35 Aligned_cols=22 Identities=0% Similarity=0.433 Sum_probs=18.4
Q ss_pred HHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 9999986178899999998548
Q T0637 72 IKLYTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 72 ~~iY~~~fT~eEl~~liaFY~S 93 (146)
.+.+.+.+|.+||.++++||.|
T Consensus 54 M~~~~~~Lsd~ei~~la~Y~~s 75 (80)
T d1fcdc1 54 MGRIAKGYSTADFEKMAGYFKQ 75 (80)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHT
T ss_pred HHHHHCCCCHHHHHHHHHHHHH
T ss_conf 7888714999999999999986
No 5
>d1c53a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Desulfovibrio vulgaris, different strains [TaxId: 881]}
Probab=64.92 E-value=1.9 Score=20.50 Aligned_cols=25 Identities=8% Similarity=0.367 Sum_probs=20.8
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 9999999986178899999998548
Q T0637 69 PELIKLYTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 69 ~~~~~iY~~~fT~eEl~~liaFY~S 93 (146)
....+.|...+|.+|+.++++|..|
T Consensus 54 ~~~Mp~~~~~Lsd~ei~~l~aYi~s 78 (79)
T d1c53a_ 54 KAVMTNLVKRYSDEEMKAMADYMSK 78 (79)
T ss_pred HHCCHHHHHCCCHHHHHHHHHHHHH
T ss_conf 0010787704999999999999975
No 6
>d1cnoa_ a.3.1.1 (A:) Cytochrome c552 {Pseudomonas nautica [TaxId: 2743]}
Probab=62.08 E-value=2.6 Score=19.63 Aligned_cols=23 Identities=22% Similarity=0.553 Sum_probs=19.0
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 99999986178899999998548
Q T0637 71 LIKLYTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 71 ~~~iY~~~fT~eEl~~liaFY~S 93 (146)
....+.+.+|.+||.++++||.|
T Consensus 59 ~m~~~~~~Lsd~di~~laaYi~s 81 (86)
T d1cnoa_ 59 VMQGQATALSDADIANLAAYYAS 81 (86)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 36787724999999999999995
No 7
>d1iqca2 a.3.1.5 (A:151-308) Di-heme cytochrome c peroxidase {Nitrosomonas europaea [TaxId: 915]}
Probab=56.27 E-value=4.5 Score=18.04 Aligned_cols=22 Identities=23% Similarity=0.499 Sum_probs=18.4
Q ss_pred HHHCCHHHHHHHHHHHCCHHHH
Q ss_conf 9861788999999985488779
Q T0637 76 TTNFTESELKDLNAFYQSPLGK 97 (146)
Q Consensus 76 ~~~fT~eEl~~liaFY~Sp~Gk 97 (146)
...+|.+|+++|++|.+|=.|.
T Consensus 114 ~~~Ls~~E~~~LvaFL~sLt~~ 135 (158)
T d1iqca2 114 NREFNKDEVSKIVAFLKTLTGD 135 (158)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCC
T ss_conf 7898999999999999966999
No 8
>d1h1oa2 a.3.1.4 (A:94-183) Cytochrome c4 {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=55.77 E-value=3.3 Score=18.92 Aligned_cols=22 Identities=27% Similarity=0.486 Sum_probs=18.2
Q ss_pred HHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 9999986178899999998548
Q T0637 72 IKLYTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 72 ~~iY~~~fT~eEl~~liaFY~S 93 (146)
....++.+|.+||+++.+||.|
T Consensus 68 M~~~a~~lsd~ei~~la~Y~as 89 (90)
T d1h1oa2 68 MNQIAKNITVAQMKDVAAYLSS 89 (90)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHH
T ss_conf 9999986899999999999975
No 9
>d1m70a1 a.3.1.4 (A:1-92) Cytochrome c4 {Pseudomonas stutzeri [TaxId: 316]}
Probab=55.54 E-value=1.1 Score=22.05 Aligned_cols=23 Identities=17% Similarity=0.429 Sum_probs=19.3
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 99999986178899999998548
Q T0637 71 LIKLYTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 71 ~~~iY~~~fT~eEl~~liaFY~S 93 (146)
.-+.+...+|.+||.+|++|++|
T Consensus 65 ~Mp~~~~~Lsd~ei~dl~aYi~s 87 (92)
T d1m70a1 65 EMTGMLDPLSDQDLEDIAAYFSS 87 (92)
T ss_dssp GGTTTTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 41899866899999999999997
No 10
>d1nmla2 a.3.1.5 (A:167-326) Di-heme cytochrome c peroxidase {Pseudomonas nautica [TaxId: 2743]}
Probab=52.09 E-value=3.6 Score=18.67 Aligned_cols=21 Identities=29% Similarity=0.528 Sum_probs=17.2
Q ss_pred HHCCHHHHHHHHHHHCCHHHH
Q ss_conf 861788999999985488779
Q T0637 77 TNFTESELKDLNAFYQSPLGK 97 (146)
Q Consensus 77 ~~fT~eEl~~liaFY~Sp~Gk 97 (146)
..+|.+|+++|++|.+|=.|.
T Consensus 116 ~~Lt~~e~~~LvaFL~tLtd~ 136 (160)
T d1nmla2 116 TELNNDEVKSIVAFLKTLTGN 136 (160)
T ss_dssp CCCCHHHHHHHHHHHGGGCCC
T ss_pred CCCCHHHHHHHHHHHHHCCCC
T ss_conf 589999999999999974899
No 11
>d2npta1 d.15.2.2 (A:4-108) Mitogen activated protein kinase kinase 5, Map2k5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.40 E-value=5.3 Score=17.56 Aligned_cols=17 Identities=24% Similarity=0.518 Sum_probs=14.2
Q ss_pred CHHHHHHHHHHHCCHHH
Q ss_conf 78899999998548877
Q T0637 80 TESELKDLNAFYQSPLG 96 (146)
Q Consensus 80 T~eEl~~liaFY~Sp~G 96 (146)
|.|||++|+.||-++.-
T Consensus 71 SDEEl~AMisyy~~~~~ 87 (105)
T d2npta1 71 SDEEMKAMLSYYYSTVM 87 (105)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
T ss_conf 67999999999999999
No 12
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=43.37 E-value=9.7 Score=15.79 Aligned_cols=24 Identities=13% Similarity=0.200 Sum_probs=18.8
Q ss_pred HHHHHCCHHHHHHHHHHHCCHHHH
Q ss_conf 999861788999999985488779
Q T0637 74 LYTTNFTESELKDLNAFYQSPLGK 97 (146)
Q Consensus 74 iY~~~fT~eEl~~liaFY~Sp~Gk 97 (146)
.=.=-||.+|++.++..|..|-+.
T Consensus 12 ar~lGFsL~EI~~ll~l~~~~~~~ 35 (94)
T d1q08a_ 12 ARQLGFSLESIRELLSIRIDPEHH 35 (94)
T ss_dssp HHHTTCCHHHHHHHHHHHHCGGGC
T ss_pred HHHCCCCHHHHHHHHHHCCCCCCC
T ss_conf 999799899999999853388867
No 13
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=42.21 E-value=9.9 Score=15.73 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=25.4
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
Q ss_conf 06899999999999986178899999998548877999
Q T0637 62 IGWDKIKPELIKLYTTNFTESELKDLNAFYQSPLGKKV 99 (146)
Q Consensus 62 ~~~~~l~~~~~~iY~~~fT~eEl~~liaFY~Sp~Gkk~ 99 (146)
++.+.+++-+-.-...+=.++-+.+|.++|+|-+|-=+
T Consensus 3 Fsv~~fi~Nf~~~i~mn~~~dkIhAmNaYYrsVvstlv 40 (67)
T d2gsva1 3 FSVPYFIENLKQHIEMNQSEDKIHAMNSYYRSVVSTLV 40 (67)
T ss_dssp TCHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 53289999899999829108899999999999999999
No 14
>d1eb7a2 a.3.1.5 (A:165-323) Di-heme cytochrome c peroxidase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=34.69 E-value=10 Score=15.69 Aligned_cols=22 Identities=23% Similarity=0.480 Sum_probs=18.4
Q ss_pred HHCCHHHHHHHHHHHCCHHHHH
Q ss_conf 8617889999999854887799
Q T0637 77 TNFTESELKDLNAFYQSPLGKK 98 (146)
Q Consensus 77 ~~fT~eEl~~liaFY~Sp~Gkk 98 (146)
..+|.+|+.+|++|.+|=.|..
T Consensus 118 ~~Ls~~e~~~LvaFL~sLt~~~ 139 (159)
T d1eb7a2 118 KQLAPDDVENIVAFLHSLSGKQ 139 (159)
T ss_dssp SCCCHHHHHHHHHHHHTTCCCC
T ss_pred CCCCHHHHHHHHHHHHHCCCCC
T ss_conf 7899999999999999668999
No 15
>d1ynra1 a.3.1.1 (A:1-80) Cytochrome c552 {Hydrogenobacter thermophilus [TaxId: 940]}
Probab=33.26 E-value=11 Score=15.44 Aligned_cols=19 Identities=32% Similarity=0.364 Sum_probs=15.7
Q ss_pred HHHHCCHHHHHHHHHHHCC
Q ss_conf 9986178899999998548
Q T0637 75 YTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 75 Y~~~fT~eEl~~liaFY~S 93 (146)
+...+|.+|+++|++|-.|
T Consensus 60 ~~~~lsd~ei~~l~~yi~s 78 (80)
T d1ynra1 60 PPQNVTDAEAKQLAQWILS 78 (80)
T ss_dssp CCCSCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHH
T ss_conf 4345899999999999997
No 16
>d1cora_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas stutzeri [TaxId: 316]}
Probab=32.28 E-value=12 Score=15.24 Aligned_cols=16 Identities=38% Similarity=0.304 Sum_probs=14.1
Q ss_pred HCCHHHHHHHHHHHCC
Q ss_conf 6178899999998548
Q T0637 78 NFTESELKDLNAFYQS 93 (146)
Q Consensus 78 ~fT~eEl~~liaFY~S 93 (146)
.+|.+|+++|++|..|
T Consensus 65 ~lsdeei~~la~Yi~S 80 (82)
T d1cora_ 65 PVTEEEAKILAEWILS 80 (82)
T ss_dssp SCCHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 7999999999999985
No 17
>d1h32b_ a.3.1.1 (B:) Mono-heme c-type cytochrome SoxX {Rhodovulum sulfidophilum [TaxId: 35806]}
Probab=31.43 E-value=14 Score=14.77 Aligned_cols=18 Identities=17% Similarity=0.361 Sum_probs=15.2
Q ss_pred HHHCCHHHHHHHHHHHCC
Q ss_conf 986178899999998548
Q T0637 76 TTNFTESELKDLNAFYQS 93 (146)
Q Consensus 76 ~~~fT~eEl~~liaFY~S 93 (146)
...+|++|+.+|++|..|
T Consensus 118 ~~~Lt~~ei~dlvAYL~t 135 (138)
T d1h32b_ 118 RPLMTAGQIEDVVAYLMT 135 (138)
T ss_dssp CCSSCHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHH
T ss_conf 358999999999999997
No 18
>d351ca_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.80 E-value=13 Score=15.00 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=14.1
Q ss_pred HCCHHHHHHHHHHHCC
Q ss_conf 6178899999998548
Q T0637 78 NFTESELKDLNAFYQS 93 (146)
Q Consensus 78 ~fT~eEl~~liaFY~S 93 (146)
.+|++|+++|++|..|
T Consensus 65 ~lsd~ei~~la~Yi~S 80 (82)
T d351ca_ 65 AVSDDEAQTLAKWVLS 80 (82)
T ss_dssp SCCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 7999999999999986
No 19
>d1kv9a1 a.3.1.6 (A:561-664) Quinoprotein alcohol dehydrogenase, C-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=29.95 E-value=9.1 Score=15.99 Aligned_cols=30 Identities=7% Similarity=0.206 Sum_probs=22.9
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 999998617889999999854887799999
Q T0637 72 IKLYTTNFTESELKDLNAFYQSPLGKKVLE 101 (146)
Q Consensus 72 ~~iY~~~fT~eEl~~liaFY~Sp~Gkk~~~ 101 (146)
.+.|...+|.+|+.++++|-.|=..+-+++
T Consensus 73 Mp~~~~~Lsd~ei~~v~aYi~s~~~~~~~a 102 (104)
T d1kv9a1 73 MPSFDDSLKPEEVEQIKLYVMSREYEDYMA 102 (104)
T ss_dssp CCCCTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCHHHC
T ss_conf 776346899999999999999807455640
No 20
>d3c2ca_ a.3.1.1 (A:) Cytochrome c2 {Rhodospirillum rubrum [TaxId: 1085]}
Probab=29.01 E-value=16 Score=14.31 Aligned_cols=17 Identities=12% Similarity=0.344 Sum_probs=14.8
Q ss_pred HHCCHHHHHHHHHHHCC
Q ss_conf 86178899999998548
Q T0637 77 TNFTESELKDLNAFYQS 93 (146)
Q Consensus 77 ~~fT~eEl~~liaFY~S 93 (146)
...+++|+.+|++|-+|
T Consensus 94 ~~ls~qdi~divAYL~t 110 (112)
T d3c2ca_ 94 KLTKDDEIENVIAYLKT 110 (112)
T ss_dssp CCCCHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHH
T ss_conf 78999999999999986
No 21
>d1f1fa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Arthrospira maxima [TaxId: 129910]}
Probab=27.64 E-value=9.4 Score=15.90 Aligned_cols=23 Identities=9% Similarity=0.242 Sum_probs=18.5
Q ss_pred HHHHHHCCHHHHHHHHHHHCCHH
Q ss_conf 99998617889999999854887
Q T0637 73 KLYTTNFTESELKDLNAFYQSPL 95 (146)
Q Consensus 73 ~iY~~~fT~eEl~~liaFY~Sp~ 95 (146)
+.|...+|.+|+.++++|-.+-+
T Consensus 62 p~~~~~Lsd~ei~~v~aYi~~~a 84 (88)
T d1f1fa_ 62 PGFNGRLSPLQIEDVAAYVVDQA 84 (88)
T ss_dssp CCCTTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 86667899999999999999987
No 22
>d2cqna1 a.159.2.1 (A:743-806) Hypa/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.62 E-value=16 Score=14.26 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHC
Q ss_conf 9999999886338991278999999999999988-74068999999999999861
Q T0637 26 VQQMLAQRFAQAKAPESKKAVLERYQAKANAELD-RAIGWDKIKPELIKLYTTNF 79 (146)
Q Consensus 26 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~iY~~~f 79 (146)
....+++++++..+|-+....|+.+.+++...-. ..+ .+...=+.||..+.
T Consensus 4 ~E~aFknmLk~~~Ppi~~~s~WeevR~r~ene~AF~ai---tlEsERiRiFkef~ 55 (64)
T d2cqna1 4 KESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDI---TLESERKRIFKDFM 55 (64)
T ss_dssp HHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSHHHHTC---CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHH---HHHHHHHHHHHHHH
T ss_conf 88999999997489888767599999998151898874---78999999999999
No 23
>d1kb0a1 a.3.1.6 (A:579-675) Quinoprotein alcohol dehydrogenase, C-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=27.12 E-value=6.3 Score=17.04 Aligned_cols=23 Identities=22% Similarity=0.455 Sum_probs=18.8
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCH
Q ss_conf 99999861788999999985488
Q T0637 72 IKLYTTNFTESELKDLNAFYQSP 94 (146)
Q Consensus 72 ~~iY~~~fT~eEl~~liaFY~Sp 94 (146)
.+-|...+|.+|+.+|++|-.+.
T Consensus 69 MP~~~~~Ls~~ei~~i~aYl~~~ 91 (97)
T d1kb0a1 69 MPDFTGKLSGDDVESLKAFIQGT 91 (97)
T ss_dssp CCCCTTTSCTTHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 85424579999999999999874
No 24
>d1ls9a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Green alga (Cladophora glomerata) [TaxId: 162068]}
Probab=26.85 E-value=9.1 Score=15.97 Aligned_cols=25 Identities=4% Similarity=0.251 Sum_probs=19.0
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCHHH
Q ss_conf 9999986178899999998548877
Q T0637 72 IKLYTTNFTESELKDLNAFYQSPLG 96 (146)
Q Consensus 72 ~~iY~~~fT~eEl~~liaFY~Sp~G 96 (146)
.|.|...+|.+|+.++++|-.+-.|
T Consensus 63 MP~~~~~Lsdeei~~l~aYi~~~a~ 87 (91)
T d1ls9a_ 63 MPAWADRLDEDDIEAVSNYVYDQAV 87 (91)
T ss_dssp BCCCTTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 8400369999999999999998857
No 25
>d1lfma_ a.3.1.1 (A:) Mitochondrial cytochrome c {Bluefin tuna (Thunnus thynnus) [TaxId: 8237]}
Probab=24.17 E-value=15 Score=14.46 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=15.8
Q ss_pred HHHHCCHHHHHHHHHHHCCH
Q ss_conf 99861788999999985488
Q T0637 75 YTTNFTESELKDLNAFYQSP 94 (146)
Q Consensus 75 Y~~~fT~eEl~~liaFY~Sp 94 (146)
|....+++|+.++++|-+|-
T Consensus 82 ~~~~ls~~ei~dviAYLkt~ 101 (103)
T d1lfma_ 82 FAGIKKKGERQDLVAYLKSA 101 (103)
T ss_dssp CCCCCSHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHH
T ss_conf 88999999999999999986
No 26
>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}
Probab=23.50 E-value=20 Score=13.63 Aligned_cols=18 Identities=17% Similarity=0.193 Sum_probs=14.8
Q ss_pred HHHCCHHHHHHHHHHHCC
Q ss_conf 986178899999998548
Q T0637 76 TTNFTESELKDLNAFYQS 93 (146)
Q Consensus 76 ~~~fT~eEl~~liaFY~S 93 (146)
...+|.+||.++++|-.|
T Consensus 65 ~~~Lsd~ei~~vv~Yi~~ 82 (83)
T d1cc5a_ 65 CADCSDDELKAAIGKMSG 82 (83)
T ss_dssp CSSCCHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHH
T ss_conf 589999999999999862
No 27
>d2qdya1 d.149.1.1 (A:10-206) Iron-containing nitrile hydratase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=22.07 E-value=19 Score=13.91 Aligned_cols=24 Identities=0% Similarity=0.058 Sum_probs=19.3
Q ss_pred HHHHCCHHHHHHHHHHHCCHHHHH
Q ss_conf 998617889999999854887799
Q T0637 75 YTTNFTESELKDLNAFYQSPLGKK 98 (146)
Q Consensus 75 Y~~~fT~eEl~~liaFY~Sp~Gkk 98 (146)
=+..+|.++|+.+|.+|++.+|=.
T Consensus 23 eKGli~~~~vd~~ie~~e~~vgP~ 46 (197)
T d2qdya1 23 GKGLVPDGYVEGWKKTFEEDFSPR 46 (197)
T ss_dssp TTTCSCTTHHHHHHHHHHHTSCHH
T ss_pred HCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 869999999999999986434873
No 28
>d1f1ca_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Arthrospira maxima [TaxId: 129910]}
Probab=21.56 E-value=22 Score=13.44 Aligned_cols=17 Identities=18% Similarity=0.387 Sum_probs=14.2
Q ss_pred HHCCHHHHHHHHHHHCC
Q ss_conf 86178899999998548
Q T0637 77 TNFTESELKDLNAFYQS 93 (146)
Q Consensus 77 ~~fT~eEl~~liaFY~S 93 (146)
..+|++||.+|++|-.|
T Consensus 103 ~~Lsdedi~ai~aYi~~ 119 (129)
T d1f1ca_ 103 RNISEDDLYNVAGYILL 119 (129)
T ss_dssp SSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
T ss_conf 66999999999999997
No 29
>d1gdva_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Red alga (Porphyra yezoensis) [TaxId: 2788]}
Probab=21.54 E-value=14 Score=14.65 Aligned_cols=24 Identities=8% Similarity=0.289 Sum_probs=18.7
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCHH
Q ss_conf 999998617889999999854887
Q T0637 72 IKLYTTNFTESELKDLNAFYQSPL 95 (146)
Q Consensus 72 ~~iY~~~fT~eEl~~liaFY~Sp~ 95 (146)
.+.|...+|.+|+.++++|..+-+
T Consensus 58 Mp~~~~~Lsd~ei~~v~~Yi~~~a 81 (85)
T d1gdva_ 58 MPAFGGRLVDEDIEDAANYVLSQS 81 (85)
T ss_dssp BCCCTTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 986567899999999999999987
No 30
>d1wvec1 a.3.1.1 (C:602-675) p-Cresol methylhydroxylase, cytochrome c subunit {Pseudomonas putida [TaxId: 303]}
Probab=21.09 E-value=19 Score=13.89 Aligned_cols=20 Identities=10% Similarity=0.356 Sum_probs=15.5
Q ss_pred HHH-HHCCHHHHHHHHHHHCC
Q ss_conf 999-86178899999998548
Q T0637 74 LYT-TNFTESELKDLNAFYQS 93 (146)
Q Consensus 74 iY~-~~fT~eEl~~liaFY~S 93 (146)
.|. ..+|.+|+.++++|-.|
T Consensus 51 ~~~~~~lsd~ei~~l~~Yi~s 71 (74)
T d1wvec1 51 AFPASYVDDESLTQVAEYLSS 71 (74)
T ss_dssp CCCTTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
T ss_conf 321146999999999999986
No 31
>d1a56a_ a.3.1.1 (A:) Cytochrome c552 {Nitrosomonas europaea [TaxId: 915]}
Probab=20.70 E-value=16 Score=14.33 Aligned_cols=19 Identities=16% Similarity=0.284 Sum_probs=15.0
Q ss_pred HHHHHCCHHHHHHHHHHHCC
Q ss_conf 99986178899999998548
Q T0637 74 LYTTNFTESELKDLNAFYQS 93 (146)
Q Consensus 74 iY~~~fT~eEl~~liaFY~S 93 (146)
.|. .+|.+|+++|++|..|
T Consensus 61 ~~~-~Lsd~ei~~l~~Yl~s 79 (81)
T d1a56a_ 61 PNV-NVSDADAKALADWILT 79 (81)
T ss_dssp SCC-SSSSHHHHHHHHHHHH
T ss_pred CCC-CCCHHHHHHHHHHHHH
T ss_conf 436-8999999999999997
No 32
>d1v29a_ d.149.1.1 (A:) Cobalt-containing nitrile hydratase {Bacillus smithii [TaxId: 1479]}
Probab=20.42 E-value=19 Score=13.82 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=21.9
Q ss_pred HHHHCCHHHHHHHHHHHCCHH----HHHHHHH
Q ss_conf 998617889999999854887----7999998
Q T0637 75 YTTNFTESELKDLNAFYQSPL----GKKVLEK 102 (146)
Q Consensus 75 Y~~~fT~eEl~~liaFY~Sp~----Gkk~~~k 102 (146)
=+..||.++|+.+|.+|++-+ |-+++++
T Consensus 28 eKGlit~~~id~~ie~~e~~vgP~nGArvVAR 59 (203)
T d1v29a_ 28 EKRLLSSDAIERVIKHYEHELGPMNGAKVVAK 59 (203)
T ss_dssp HTTSSCHHHHHHHHHHHHTTCCTHHHHHHHHH
T ss_pred HCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 86999989999999999763498317899998
No 33
>d1twya_ c.94.1.1 (A:) ABC transporter, periplasmic substrate-binding protein VCA0807 {Vibrio cholerae [TaxId: 666]}
Probab=20.37 E-value=24 Score=13.22 Aligned_cols=23 Identities=26% Similarity=0.366 Sum_probs=19.7
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 89999999854887799999828
Q T0637 82 SELKDLNAFYQSPLGKKVLEKMP 104 (146)
Q Consensus 82 eEl~~liaFY~Sp~Gkk~~~k~P 104 (146)
+..++.++|..|+.||+++.+..
T Consensus 223 ~~a~~Fi~f~~S~~gq~ii~~~G 245 (249)
T d1twya_ 223 EQTKEFIAFLKSESAKKLIVEYG 245 (249)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCHHHHHHHHHCC
T ss_conf 99999999981988899999679
No 34
>d1ctja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Monoraphidium braunii [TaxId: 34112]}
Probab=20.29 E-value=13 Score=14.89 Aligned_cols=24 Identities=13% Similarity=0.272 Sum_probs=19.2
Q ss_pred HHHHHHCCHHHHHHHHHHHCCHHH
Q ss_conf 999986178899999998548877
Q T0637 73 KLYTTNFTESELKDLNAFYQSPLG 96 (146)
Q Consensus 73 ~iY~~~fT~eEl~~liaFY~Sp~G 96 (146)
+.|...+|.+|+.++++|..+=.|
T Consensus 62 p~~~~~Lsd~ei~~v~~Yi~~~~~ 85 (89)
T d1ctja_ 62 PAWDGRLDEDEIAGVAAYVYDQAA 85 (89)
T ss_dssp CCCBTTBCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 766778999999999999998745
No 35
>d1cxca_ a.3.1.1 (A:) Cytochrome c2 {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=20.15 E-value=21 Score=13.62 Aligned_cols=17 Identities=18% Similarity=0.210 Sum_probs=14.4
Q ss_pred HCCHHHHHHHHHHHCCH
Q ss_conf 61788999999985488
Q T0637 78 NFTESELKDLNAFYQSP 94 (146)
Q Consensus 78 ~fT~eEl~~liaFY~Sp 94 (146)
.++.+|+.+||||.+|-
T Consensus 104 ~l~~~di~DLiAYL~sl 120 (124)
T d1cxca_ 104 LKKEADAHNIWAYLQQV 120 (124)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC
T ss_conf 88999999999999873
Done!