Query         T0637 NP_249547.1, PSEUDOMONAS AERUGINOSA, 146 residues
Match_columns 146
No_of_seqs    110 out of 175
Neff          7.2 
Searched_HMMs 15564
Date          Thu Jul 22 15:02:50 2010
Command       /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0637.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0637.hhr 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1h1oa1 a.3.1.4 (A:12-93) Cyto  68.5     1.4   9E-05   21.4   2.1   25   69-93     50-74  (82)
  2 d1m70a2 a.3.1.4 (A:93-190) Cyt  68.3     1.9 0.00012   20.6   2.7   23   71-93     74-96  (98)
  3 d1fcdc2 a.3.1.4 (C:81-174) Fla  67.3     1.6  0.0001   21.1   2.1   26   68-93     67-92  (94)
  4 d1fcdc1 a.3.1.4 (C:1-80) Flavo  65.0       2 0.00013   20.3   2.3   22   72-93     54-75  (80)
  5 d1c53a_ a.3.1.1 (A:) Cytochrom  64.9     1.9 0.00012   20.5   2.2   25   69-93     54-78  (79)
  6 d1cnoa_ a.3.1.1 (A:) Cytochrom  62.1     2.6 0.00017   19.6   2.4   23   71-93     59-81  (86)
  7 d1iqca2 a.3.1.5 (A:151-308) Di  56.3     4.5 0.00029   18.0   2.8   22   76-97    114-135 (158)
  8 d1h1oa2 a.3.1.4 (A:94-183) Cyt  55.8     3.3 0.00021   18.9   2.1   22   72-93     68-89  (90)
  9 d1m70a1 a.3.1.4 (A:1-92) Cytoc  55.5     1.1 7.3E-05   22.0  -0.3   23   71-93     65-87  (92)
 10 d1nmla2 a.3.1.5 (A:167-326) Di  52.1     3.6 0.00023   18.7   1.8   21   77-97    116-136 (160)
 11 d2npta1 d.15.2.2 (A:4-108) Mit  43.4     5.3 0.00034   17.6   1.5   17   80-96     71-87  (105)
 12 d1q08a_ a.6.1.3 (A:) Transcrip  43.4     9.7 0.00063   15.8   7.3   24   74-97     12-35  (94)
 13 d2gsva1 a.23.7.1 (A:3-69) Hypo  42.2     9.9 0.00064   15.7   2.8   38   62-99      3-40  (67)
 14 d1eb7a2 a.3.1.5 (A:165-323) Di  34.7      10 0.00065   15.7   1.9   22   77-98    118-139 (159)
 15 d1ynra1 a.3.1.1 (A:1-80) Cytoc  33.3      11 0.00071   15.4   1.9   19   75-93     60-78  (80)
 16 d1cora_ a.3.1.1 (A:) Cytochrom  32.3      12 0.00076   15.2   1.9   16   78-93     65-80  (82)
 17 d1h32b_ a.3.1.1 (B:) Mono-heme  31.4      14 0.00089   14.8   2.1   18   76-93    118-135 (138)
 18 d351ca_ a.3.1.1 (A:) Cytochrom  30.8      13 0.00082   15.0   1.9   16   78-93     65-80  (82)
 19 d1kv9a1 a.3.1.6 (A:561-664) Qu  29.9     9.1 0.00058   16.0   1.0   30   72-101    73-102 (104)
 20 d3c2ca_ a.3.1.1 (A:) Cytochrom  29.0      16   0.001   14.3   2.1   17   77-93     94-110 (112)
 21 d1f1fa_ a.3.1.1 (A:) Cytochrom  27.6     9.4  0.0006   15.9   0.7   23   73-95     62-84  (88)
 22 d2cqna1 a.159.2.1 (A:743-806)   27.6      16  0.0011   14.3   2.0   51   26-79      4-55  (64)
 23 d1kb0a1 a.3.1.6 (A:579-675) Qu  27.1     6.3 0.00041   17.0  -0.2   23   72-94     69-91  (97)
 24 d1ls9a_ a.3.1.1 (A:) Cytochrom  26.8     9.1 0.00059   16.0   0.5   25   72-96     63-87  (91)
 25 d1lfma_ a.3.1.1 (A:) Mitochond  24.2      15 0.00099   14.5   1.3   20   75-94     82-101 (103)
 26 d1cc5a_ a.3.1.1 (A:) Cytochrom  23.5      20  0.0013   13.6   1.8   18   76-93     65-82  (83)
 27 d2qdya1 d.149.1.1 (A:10-206) I  22.1      19  0.0012   13.9   1.4   24   75-98     23-46  (197)
 28 d1f1ca_ a.3.1.1 (A:) Photosyst  21.6      22  0.0014   13.4   1.6   17   77-93    103-119 (129)
 29 d1gdva_ a.3.1.1 (A:) Cytochrom  21.5      14 0.00093   14.7   0.7   24   72-95     58-81  (85)
 30 d1wvec1 a.3.1.1 (C:602-675) p-  21.1      19  0.0012   13.9   1.2   20   74-93     51-71  (74)
 31 d1a56a_ a.3.1.1 (A:) Cytochrom  20.7      16   0.001   14.3   0.8   19   74-93     61-79  (81)
 32 d1v29a_ d.149.1.1 (A:) Cobalt-  20.4      19  0.0012   13.8   1.2   28   75-102    28-59  (203)
 33 d1twya_ c.94.1.1 (A:) ABC tran  20.4      24  0.0015   13.2   3.1   23   82-104   223-245 (249)
 34 d1ctja_ a.3.1.1 (A:) Cytochrom  20.3      13 0.00085   14.9   0.3   24   73-96     62-85  (89)
 35 d1cxca_ a.3.1.1 (A:) Cytochrom  20.1      21  0.0013   13.6   1.3   17   78-94    104-120 (124)

No 1  
>d1h1oa1 a.3.1.4 (A:12-93) Cytochrome c4 {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=68.52  E-value=1.4  Score=21.43  Aligned_cols=25  Identities=4%  Similarity=0.205  Sum_probs=20.6

Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             9999999986178899999998548
Q T0637            69 PELIKLYTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        69 ~~~~~iY~~~fT~eEl~~liaFY~S   93 (146)
                      ....+.+...||.+||.+|++|+.|
T Consensus        50 ~~~M~~~~~~LSd~eI~~la~Yi~s   74 (82)
T d1h1oa1          50 EIYMWPVAQALDSAKITALADYFNA   74 (82)
T ss_dssp             HHHTHHHHHTCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHCCHHHHHHHHHHHHH
T ss_conf             0214387755799999999999982


No 2  
>d1m70a2 a.3.1.4 (A:93-190) Cytochrome c4 {Pseudomonas stutzeri [TaxId: 316]}
Probab=68.34  E-value=1.9  Score=20.60  Aligned_cols=23  Identities=9%  Similarity=0.420  Sum_probs=19.4

Q ss_pred             HHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             99999986178899999998548
Q T0637            71 LIKLYTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        71 ~~~iY~~~fT~eEl~~liaFY~S   93 (146)
                      +.+.+.+.||.+||+++++||.|
T Consensus        74 ~M~~~~~~lsd~di~~la~Yias   96 (98)
T d1m70a2          74 IMRGVAAKLSNKDIEALSSYIQG   96 (98)
T ss_dssp             HHHHHHTTCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             59999986999999999999987


No 3  
>d1fcdc2 a.3.1.4 (C:81-174) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=67.34  E-value=1.6  Score=21.09  Aligned_cols=26  Identities=23%  Similarity=0.264  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             99999999986178899999998548
Q T0637            68 KPELIKLYTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        68 ~~~~~~iY~~~fT~eEl~~liaFY~S   93 (146)
                      .....+.+...+|.+||.+|++||.|
T Consensus        67 ~~~~M~~~~~~LSd~di~alaaY~~S   92 (94)
T d1fcdc2          67 MASKLRELLKAEGDAGLDALFAFYAS   92 (94)
T ss_dssp             HHHHHHTTGGGSTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             57889998852899999999999985


No 4  
>d1fcdc1 a.3.1.4 (C:1-80) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=64.98  E-value=2  Score=20.35  Aligned_cols=22  Identities=0%  Similarity=0.433  Sum_probs=18.4

Q ss_pred             HHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             9999986178899999998548
Q T0637            72 IKLYTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        72 ~~iY~~~fT~eEl~~liaFY~S   93 (146)
                      .+.+.+.+|.+||.++++||.|
T Consensus        54 M~~~~~~Lsd~ei~~la~Y~~s   75 (80)
T d1fcdc1          54 MGRIAKGYSTADFEKMAGYFKQ   75 (80)
T ss_dssp             HHHHHTTSCHHHHHHHHHHHHT
T ss_pred             HHHHHCCCCHHHHHHHHHHHHH
T ss_conf             7888714999999999999986


No 5  
>d1c53a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Desulfovibrio vulgaris, different strains [TaxId: 881]}
Probab=64.92  E-value=1.9  Score=20.50  Aligned_cols=25  Identities=8%  Similarity=0.367  Sum_probs=20.8

Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             9999999986178899999998548
Q T0637            69 PELIKLYTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        69 ~~~~~iY~~~fT~eEl~~liaFY~S   93 (146)
                      ....+.|...+|.+|+.++++|..|
T Consensus        54 ~~~Mp~~~~~Lsd~ei~~l~aYi~s   78 (79)
T d1c53a_          54 KAVMTNLVKRYSDEEMKAMADYMSK   78 (79)
T ss_pred             HHCCHHHHHCCCHHHHHHHHHHHHH
T ss_conf             0010787704999999999999975


No 6  
>d1cnoa_ a.3.1.1 (A:) Cytochrome c552 {Pseudomonas nautica [TaxId: 2743]}
Probab=62.08  E-value=2.6  Score=19.63  Aligned_cols=23  Identities=22%  Similarity=0.553  Sum_probs=19.0

Q ss_pred             HHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             99999986178899999998548
Q T0637            71 LIKLYTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        71 ~~~iY~~~fT~eEl~~liaFY~S   93 (146)
                      ....+.+.+|.+||.++++||.|
T Consensus        59 ~m~~~~~~Lsd~di~~laaYi~s   81 (86)
T d1cnoa_          59 VMQGQATALSDADIANLAAYYAS   81 (86)
T ss_dssp             HHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             36787724999999999999995


No 7  
>d1iqca2 a.3.1.5 (A:151-308) Di-heme cytochrome c peroxidase {Nitrosomonas europaea [TaxId: 915]}
Probab=56.27  E-value=4.5  Score=18.04  Aligned_cols=22  Identities=23%  Similarity=0.499  Sum_probs=18.4

Q ss_pred             HHHCCHHHHHHHHHHHCCHHHH
Q ss_conf             9861788999999985488779
Q T0637            76 TTNFTESELKDLNAFYQSPLGK   97 (146)
Q Consensus        76 ~~~fT~eEl~~liaFY~Sp~Gk   97 (146)
                      ...+|.+|+++|++|.+|=.|.
T Consensus       114 ~~~Ls~~E~~~LvaFL~sLt~~  135 (158)
T d1iqca2         114 NREFNKDEVSKIVAFLKTLTGD  135 (158)
T ss_dssp             CCCCCHHHHHHHHHHHHTTCCC
T ss_pred             CCCCCHHHHHHHHHHHHHCCCC
T ss_conf             7898999999999999966999


No 8  
>d1h1oa2 a.3.1.4 (A:94-183) Cytochrome c4 {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=55.77  E-value=3.3  Score=18.92  Aligned_cols=22  Identities=27%  Similarity=0.486  Sum_probs=18.2

Q ss_pred             HHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             9999986178899999998548
Q T0637            72 IKLYTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        72 ~~iY~~~fT~eEl~~liaFY~S   93 (146)
                      ....++.+|.+||+++.+||.|
T Consensus        68 M~~~a~~lsd~ei~~la~Y~as   89 (90)
T d1h1oa2          68 MNQIAKNITVAQMKDVAAYLSS   89 (90)
T ss_dssp             HHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCHHHHHHHHHHHHH
T ss_conf             9999986899999999999975


No 9  
>d1m70a1 a.3.1.4 (A:1-92) Cytochrome c4 {Pseudomonas stutzeri [TaxId: 316]}
Probab=55.54  E-value=1.1  Score=22.05  Aligned_cols=23  Identities=17%  Similarity=0.429  Sum_probs=19.3

Q ss_pred             HHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             99999986178899999998548
Q T0637            71 LIKLYTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        71 ~~~iY~~~fT~eEl~~liaFY~S   93 (146)
                      .-+.+...+|.+||.+|++|++|
T Consensus        65 ~Mp~~~~~Lsd~ei~dl~aYi~s   87 (92)
T d1m70a1          65 EMTGMLDPLSDQDLEDIAAYFSS   87 (92)
T ss_dssp             GGTTTTTTCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             41899866899999999999997


No 10 
>d1nmla2 a.3.1.5 (A:167-326) Di-heme cytochrome c peroxidase {Pseudomonas nautica [TaxId: 2743]}
Probab=52.09  E-value=3.6  Score=18.67  Aligned_cols=21  Identities=29%  Similarity=0.528  Sum_probs=17.2

Q ss_pred             HHCCHHHHHHHHHHHCCHHHH
Q ss_conf             861788999999985488779
Q T0637            77 TNFTESELKDLNAFYQSPLGK   97 (146)
Q Consensus        77 ~~fT~eEl~~liaFY~Sp~Gk   97 (146)
                      ..+|.+|+++|++|.+|=.|.
T Consensus       116 ~~Lt~~e~~~LvaFL~tLtd~  136 (160)
T d1nmla2         116 TELNNDEVKSIVAFLKTLTGN  136 (160)
T ss_dssp             CCCCHHHHHHHHHHHGGGCCC
T ss_pred             CCCCHHHHHHHHHHHHHCCCC
T ss_conf             589999999999999974899


No 11 
>d2npta1 d.15.2.2 (A:4-108) Mitogen activated protein kinase kinase 5, Map2k5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.40  E-value=5.3  Score=17.56  Aligned_cols=17  Identities=24%  Similarity=0.518  Sum_probs=14.2

Q ss_pred             CHHHHHHHHHHHCCHHH
Q ss_conf             78899999998548877
Q T0637            80 TESELKDLNAFYQSPLG   96 (146)
Q Consensus        80 T~eEl~~liaFY~Sp~G   96 (146)
                      |.|||++|+.||-++.-
T Consensus        71 SDEEl~AMisyy~~~~~   87 (105)
T d2npta1          71 SDEEMKAMLSYYYSTVM   87 (105)
T ss_dssp             SHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHH
T ss_conf             67999999999999999


No 12 
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=43.37  E-value=9.7  Score=15.79  Aligned_cols=24  Identities=13%  Similarity=0.200  Sum_probs=18.8

Q ss_pred             HHHHHCCHHHHHHHHHHHCCHHHH
Q ss_conf             999861788999999985488779
Q T0637            74 LYTTNFTESELKDLNAFYQSPLGK   97 (146)
Q Consensus        74 iY~~~fT~eEl~~liaFY~Sp~Gk   97 (146)
                      .=.=-||.+|++.++..|..|-+.
T Consensus        12 ar~lGFsL~EI~~ll~l~~~~~~~   35 (94)
T d1q08a_          12 ARQLGFSLESIRELLSIRIDPEHH   35 (94)
T ss_dssp             HHHTTCCHHHHHHHHHHHHCGGGC
T ss_pred             HHHCCCCHHHHHHHHHHCCCCCCC
T ss_conf             999799899999999853388867


No 13 
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=42.21  E-value=9.9  Score=15.73  Aligned_cols=38  Identities=18%  Similarity=0.288  Sum_probs=25.4

Q ss_pred             CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
Q ss_conf             06899999999999986178899999998548877999
Q T0637            62 IGWDKIKPELIKLYTTNFTESELKDLNAFYQSPLGKKV   99 (146)
Q Consensus        62 ~~~~~l~~~~~~iY~~~fT~eEl~~liaFY~Sp~Gkk~   99 (146)
                      ++.+.+++-+-.-...+=.++-+.+|.++|+|-+|-=+
T Consensus         3 Fsv~~fi~Nf~~~i~mn~~~dkIhAmNaYYrsVvstlv   40 (67)
T d2gsva1           3 FSVPYFIENLKQHIEMNQSEDKIHAMNSYYRSVVSTLV   40 (67)
T ss_dssp             TCHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             53289999899999829108899999999999999999


No 14 
>d1eb7a2 a.3.1.5 (A:165-323) Di-heme cytochrome c peroxidase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=34.69  E-value=10  Score=15.69  Aligned_cols=22  Identities=23%  Similarity=0.480  Sum_probs=18.4

Q ss_pred             HHCCHHHHHHHHHHHCCHHHHH
Q ss_conf             8617889999999854887799
Q T0637            77 TNFTESELKDLNAFYQSPLGKK   98 (146)
Q Consensus        77 ~~fT~eEl~~liaFY~Sp~Gkk   98 (146)
                      ..+|.+|+.+|++|.+|=.|..
T Consensus       118 ~~Ls~~e~~~LvaFL~sLt~~~  139 (159)
T d1eb7a2         118 KQLAPDDVENIVAFLHSLSGKQ  139 (159)
T ss_dssp             SCCCHHHHHHHHHHHHTTCCCC
T ss_pred             CCCCHHHHHHHHHHHHHCCCCC
T ss_conf             7899999999999999668999


No 15 
>d1ynra1 a.3.1.1 (A:1-80) Cytochrome c552 {Hydrogenobacter thermophilus [TaxId: 940]}
Probab=33.26  E-value=11  Score=15.44  Aligned_cols=19  Identities=32%  Similarity=0.364  Sum_probs=15.7

Q ss_pred             HHHHCCHHHHHHHHHHHCC
Q ss_conf             9986178899999998548
Q T0637            75 YTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        75 Y~~~fT~eEl~~liaFY~S   93 (146)
                      +...+|.+|+++|++|-.|
T Consensus        60 ~~~~lsd~ei~~l~~yi~s   78 (80)
T d1ynra1          60 PPQNVTDAEAKQLAQWILS   78 (80)
T ss_dssp             CCCSCCHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHH
T ss_conf             4345899999999999997


No 16 
>d1cora_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas stutzeri [TaxId: 316]}
Probab=32.28  E-value=12  Score=15.24  Aligned_cols=16  Identities=38%  Similarity=0.304  Sum_probs=14.1

Q ss_pred             HCCHHHHHHHHHHHCC
Q ss_conf             6178899999998548
Q T0637            78 NFTESELKDLNAFYQS   93 (146)
Q Consensus        78 ~fT~eEl~~liaFY~S   93 (146)
                      .+|.+|+++|++|..|
T Consensus        65 ~lsdeei~~la~Yi~S   80 (82)
T d1cora_          65 PVTEEEAKILAEWILS   80 (82)
T ss_dssp             SCCHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHH
T ss_conf             7999999999999985


No 17 
>d1h32b_ a.3.1.1 (B:) Mono-heme c-type cytochrome SoxX {Rhodovulum sulfidophilum [TaxId: 35806]}
Probab=31.43  E-value=14  Score=14.77  Aligned_cols=18  Identities=17%  Similarity=0.361  Sum_probs=15.2

Q ss_pred             HHHCCHHHHHHHHHHHCC
Q ss_conf             986178899999998548
Q T0637            76 TTNFTESELKDLNAFYQS   93 (146)
Q Consensus        76 ~~~fT~eEl~~liaFY~S   93 (146)
                      ...+|++|+.+|++|..|
T Consensus       118 ~~~Lt~~ei~dlvAYL~t  135 (138)
T d1h32b_         118 RPLMTAGQIEDVVAYLMT  135 (138)
T ss_dssp             CCSSCHHHHHHHHHHHTT
T ss_pred             CCCCCHHHHHHHHHHHHH
T ss_conf             358999999999999997


No 18 
>d351ca_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.80  E-value=13  Score=15.00  Aligned_cols=16  Identities=19%  Similarity=0.310  Sum_probs=14.1

Q ss_pred             HCCHHHHHHHHHHHCC
Q ss_conf             6178899999998548
Q T0637            78 NFTESELKDLNAFYQS   93 (146)
Q Consensus        78 ~fT~eEl~~liaFY~S   93 (146)
                      .+|++|+++|++|..|
T Consensus        65 ~lsd~ei~~la~Yi~S   80 (82)
T d351ca_          65 AVSDDEAQTLAKWVLS   80 (82)
T ss_dssp             SCCHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHH
T ss_conf             7999999999999986


No 19 
>d1kv9a1 a.3.1.6 (A:561-664) Quinoprotein alcohol dehydrogenase, C-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=29.95  E-value=9.1  Score=15.99  Aligned_cols=30  Identities=7%  Similarity=0.206  Sum_probs=22.9

Q ss_pred             HHHHHHHCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             999998617889999999854887799999
Q T0637            72 IKLYTTNFTESELKDLNAFYQSPLGKKVLE  101 (146)
Q Consensus        72 ~~iY~~~fT~eEl~~liaFY~Sp~Gkk~~~  101 (146)
                      .+.|...+|.+|+.++++|-.|=..+-+++
T Consensus        73 Mp~~~~~Lsd~ei~~v~aYi~s~~~~~~~a  102 (104)
T d1kv9a1          73 MPSFDDSLKPEEVEQIKLYVMSREYEDYMA  102 (104)
T ss_dssp             CCCCTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCHHHC
T ss_conf             776346899999999999999807455640


No 20 
>d3c2ca_ a.3.1.1 (A:) Cytochrome c2 {Rhodospirillum rubrum [TaxId: 1085]}
Probab=29.01  E-value=16  Score=14.31  Aligned_cols=17  Identities=12%  Similarity=0.344  Sum_probs=14.8

Q ss_pred             HHCCHHHHHHHHHHHCC
Q ss_conf             86178899999998548
Q T0637            77 TNFTESELKDLNAFYQS   93 (146)
Q Consensus        77 ~~fT~eEl~~liaFY~S   93 (146)
                      ...+++|+.+|++|-+|
T Consensus        94 ~~ls~qdi~divAYL~t  110 (112)
T d3c2ca_          94 KLTKDDEIENVIAYLKT  110 (112)
T ss_dssp             CCCCHHHHHHHHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHH
T ss_conf             78999999999999986


No 21 
>d1f1fa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Arthrospira maxima [TaxId: 129910]}
Probab=27.64  E-value=9.4  Score=15.90  Aligned_cols=23  Identities=9%  Similarity=0.242  Sum_probs=18.5

Q ss_pred             HHHHHHCCHHHHHHHHHHHCCHH
Q ss_conf             99998617889999999854887
Q T0637            73 KLYTTNFTESELKDLNAFYQSPL   95 (146)
Q Consensus        73 ~iY~~~fT~eEl~~liaFY~Sp~   95 (146)
                      +.|...+|.+|+.++++|-.+-+
T Consensus        62 p~~~~~Lsd~ei~~v~aYi~~~a   84 (88)
T d1f1fa_          62 PGFNGRLSPLQIEDVAAYVVDQA   84 (88)
T ss_dssp             CCCTTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             86667899999999999999987


No 22 
>d2cqna1 a.159.2.1 (A:743-806) Hypa/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.62  E-value=16  Score=14.26  Aligned_cols=51  Identities=18%  Similarity=0.229  Sum_probs=32.2

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHC
Q ss_conf             9999999886338991278999999999999988-74068999999999999861
Q T0637            26 VQQMLAQRFAQAKAPESKKAVLERYQAKANAELD-RAIGWDKIKPELIKLYTTNF   79 (146)
Q Consensus        26 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~iY~~~f   79 (146)
                      ....+++++++..+|-+....|+.+.+++...-. ..+   .+...=+.||..+.
T Consensus         4 ~E~aFknmLk~~~Ppi~~~s~WeevR~r~ene~AF~ai---tlEsERiRiFkef~   55 (64)
T d2cqna1           4 KESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDI---TLESERKRIFKDFM   55 (64)
T ss_dssp             HHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSHHHHTC---CCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHH---HHHHHHHHHHHHHH
T ss_conf             88999999997489888767599999998151898874---78999999999999


No 23 
>d1kb0a1 a.3.1.6 (A:579-675) Quinoprotein alcohol dehydrogenase, C-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=27.12  E-value=6.3  Score=17.04  Aligned_cols=23  Identities=22%  Similarity=0.455  Sum_probs=18.8

Q ss_pred             HHHHHHHCCHHHHHHHHHHHCCH
Q ss_conf             99999861788999999985488
Q T0637            72 IKLYTTNFTESELKDLNAFYQSP   94 (146)
Q Consensus        72 ~~iY~~~fT~eEl~~liaFY~Sp   94 (146)
                      .+-|...+|.+|+.+|++|-.+.
T Consensus        69 MP~~~~~Ls~~ei~~i~aYl~~~   91 (97)
T d1kb0a1          69 MPDFTGKLSGDDVESLKAFIQGT   91 (97)
T ss_dssp             CCCCTTTSCTTHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             85424579999999999999874


No 24 
>d1ls9a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Green alga (Cladophora glomerata) [TaxId: 162068]}
Probab=26.85  E-value=9.1  Score=15.97  Aligned_cols=25  Identities=4%  Similarity=0.251  Sum_probs=19.0

Q ss_pred             HHHHHHHCCHHHHHHHHHHHCCHHH
Q ss_conf             9999986178899999998548877
Q T0637            72 IKLYTTNFTESELKDLNAFYQSPLG   96 (146)
Q Consensus        72 ~~iY~~~fT~eEl~~liaFY~Sp~G   96 (146)
                      .|.|...+|.+|+.++++|-.+-.|
T Consensus        63 MP~~~~~Lsdeei~~l~aYi~~~a~   87 (91)
T d1ls9a_          63 MPAWADRLDEDDIEAVSNYVYDQAV   87 (91)
T ss_dssp             BCCCTTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             8400369999999999999998857


No 25 
>d1lfma_ a.3.1.1 (A:) Mitochondrial cytochrome c {Bluefin tuna (Thunnus thynnus) [TaxId: 8237]}
Probab=24.17  E-value=15  Score=14.46  Aligned_cols=20  Identities=25%  Similarity=0.353  Sum_probs=15.8

Q ss_pred             HHHHCCHHHHHHHHHHHCCH
Q ss_conf             99861788999999985488
Q T0637            75 YTTNFTESELKDLNAFYQSP   94 (146)
Q Consensus        75 Y~~~fT~eEl~~liaFY~Sp   94 (146)
                      |....+++|+.++++|-+|-
T Consensus        82 ~~~~ls~~ei~dviAYLkt~  101 (103)
T d1lfma_          82 FAGIKKKGERQDLVAYLKSA  101 (103)
T ss_dssp             CCCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHH
T ss_conf             88999999999999999986


No 26 
>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}
Probab=23.50  E-value=20  Score=13.63  Aligned_cols=18  Identities=17%  Similarity=0.193  Sum_probs=14.8

Q ss_pred             HHHCCHHHHHHHHHHHCC
Q ss_conf             986178899999998548
Q T0637            76 TTNFTESELKDLNAFYQS   93 (146)
Q Consensus        76 ~~~fT~eEl~~liaFY~S   93 (146)
                      ...+|.+||.++++|-.|
T Consensus        65 ~~~Lsd~ei~~vv~Yi~~   82 (83)
T d1cc5a_          65 CADCSDDELKAAIGKMSG   82 (83)
T ss_dssp             CSSCCHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHHHH
T ss_conf             589999999999999862


No 27 
>d2qdya1 d.149.1.1 (A:10-206) Iron-containing nitrile hydratase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=22.07  E-value=19  Score=13.91  Aligned_cols=24  Identities=0%  Similarity=0.058  Sum_probs=19.3

Q ss_pred             HHHHCCHHHHHHHHHHHCCHHHHH
Q ss_conf             998617889999999854887799
Q T0637            75 YTTNFTESELKDLNAFYQSPLGKK   98 (146)
Q Consensus        75 Y~~~fT~eEl~~liaFY~Sp~Gkk   98 (146)
                      =+..+|.++|+.+|.+|++.+|=.
T Consensus        23 eKGli~~~~vd~~ie~~e~~vgP~   46 (197)
T d2qdya1          23 GKGLVPDGYVEGWKKTFEEDFSPR   46 (197)
T ss_dssp             TTTCSCTTHHHHHHHHHHHTSCHH
T ss_pred             HCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             869999999999999986434873


No 28 
>d1f1ca_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Arthrospira maxima [TaxId: 129910]}
Probab=21.56  E-value=22  Score=13.44  Aligned_cols=17  Identities=18%  Similarity=0.387  Sum_probs=14.2

Q ss_pred             HHCCHHHHHHHHHHHCC
Q ss_conf             86178899999998548
Q T0637            77 TNFTESELKDLNAFYQS   93 (146)
Q Consensus        77 ~~fT~eEl~~liaFY~S   93 (146)
                      ..+|++||.+|++|-.|
T Consensus       103 ~~Lsdedi~ai~aYi~~  119 (129)
T d1f1ca_         103 RNISEDDLYNVAGYILL  119 (129)
T ss_dssp             SSCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH
T ss_conf             66999999999999997


No 29 
>d1gdva_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Red alga (Porphyra yezoensis) [TaxId: 2788]}
Probab=21.54  E-value=14  Score=14.65  Aligned_cols=24  Identities=8%  Similarity=0.289  Sum_probs=18.7

Q ss_pred             HHHHHHHCCHHHHHHHHHHHCCHH
Q ss_conf             999998617889999999854887
Q T0637            72 IKLYTTNFTESELKDLNAFYQSPL   95 (146)
Q Consensus        72 ~~iY~~~fT~eEl~~liaFY~Sp~   95 (146)
                      .+.|...+|.+|+.++++|..+-+
T Consensus        58 Mp~~~~~Lsd~ei~~v~~Yi~~~a   81 (85)
T d1gdva_          58 MPAFGGRLVDEDIEDAANYVLSQS   81 (85)
T ss_dssp             BCCCTTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             986567899999999999999987


No 30 
>d1wvec1 a.3.1.1 (C:602-675) p-Cresol methylhydroxylase, cytochrome c subunit {Pseudomonas putida [TaxId: 303]}
Probab=21.09  E-value=19  Score=13.89  Aligned_cols=20  Identities=10%  Similarity=0.356  Sum_probs=15.5

Q ss_pred             HHH-HHCCHHHHHHHHHHHCC
Q ss_conf             999-86178899999998548
Q T0637            74 LYT-TNFTESELKDLNAFYQS   93 (146)
Q Consensus        74 iY~-~~fT~eEl~~liaFY~S   93 (146)
                      .|. ..+|.+|+.++++|-.|
T Consensus        51 ~~~~~~lsd~ei~~l~~Yi~s   71 (74)
T d1wvec1          51 AFPASYVDDESLTQVAEYLSS   71 (74)
T ss_dssp             CCCTTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHH
T ss_conf             321146999999999999986


No 31 
>d1a56a_ a.3.1.1 (A:) Cytochrome c552 {Nitrosomonas europaea [TaxId: 915]}
Probab=20.70  E-value=16  Score=14.33  Aligned_cols=19  Identities=16%  Similarity=0.284  Sum_probs=15.0

Q ss_pred             HHHHHCCHHHHHHHHHHHCC
Q ss_conf             99986178899999998548
Q T0637            74 LYTTNFTESELKDLNAFYQS   93 (146)
Q Consensus        74 iY~~~fT~eEl~~liaFY~S   93 (146)
                      .|. .+|.+|+++|++|..|
T Consensus        61 ~~~-~Lsd~ei~~l~~Yl~s   79 (81)
T d1a56a_          61 PNV-NVSDADAKALADWILT   79 (81)
T ss_dssp             SCC-SSSSHHHHHHHHHHHH
T ss_pred             CCC-CCCHHHHHHHHHHHHH
T ss_conf             436-8999999999999997


No 32 
>d1v29a_ d.149.1.1 (A:) Cobalt-containing nitrile hydratase {Bacillus smithii [TaxId: 1479]}
Probab=20.42  E-value=19  Score=13.82  Aligned_cols=28  Identities=21%  Similarity=0.373  Sum_probs=21.9

Q ss_pred             HHHHCCHHHHHHHHHHHCCHH----HHHHHHH
Q ss_conf             998617889999999854887----7999998
Q T0637            75 YTTNFTESELKDLNAFYQSPL----GKKVLEK  102 (146)
Q Consensus        75 Y~~~fT~eEl~~liaFY~Sp~----Gkk~~~k  102 (146)
                      =+..||.++|+.+|.+|++-+    |-+++++
T Consensus        28 eKGlit~~~id~~ie~~e~~vgP~nGArvVAR   59 (203)
T d1v29a_          28 EKRLLSSDAIERVIKHYEHELGPMNGAKVVAK   59 (203)
T ss_dssp             HTTSSCHHHHHHHHHHHHTTCCTHHHHHHHHH
T ss_pred             HCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             86999989999999999763498317899998


No 33 
>d1twya_ c.94.1.1 (A:) ABC transporter, periplasmic substrate-binding protein VCA0807 {Vibrio cholerae [TaxId: 666]}
Probab=20.37  E-value=24  Score=13.22  Aligned_cols=23  Identities=26%  Similarity=0.366  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             89999999854887799999828
Q T0637            82 SELKDLNAFYQSPLGKKVLEKMP  104 (146)
Q Consensus        82 eEl~~liaFY~Sp~Gkk~~~k~P  104 (146)
                      +..++.++|..|+.||+++.+..
T Consensus       223 ~~a~~Fi~f~~S~~gq~ii~~~G  245 (249)
T d1twya_         223 EQTKEFIAFLKSESAKKLIVEYG  245 (249)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHCHHHHHHHHHCC
T ss_conf             99999999981988899999679


No 34 
>d1ctja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Monoraphidium braunii [TaxId: 34112]}
Probab=20.29  E-value=13  Score=14.89  Aligned_cols=24  Identities=13%  Similarity=0.272  Sum_probs=19.2

Q ss_pred             HHHHHHCCHHHHHHHHHHHCCHHH
Q ss_conf             999986178899999998548877
Q T0637            73 KLYTTNFTESELKDLNAFYQSPLG   96 (146)
Q Consensus        73 ~iY~~~fT~eEl~~liaFY~Sp~G   96 (146)
                      +.|...+|.+|+.++++|..+=.|
T Consensus        62 p~~~~~Lsd~ei~~v~~Yi~~~~~   85 (89)
T d1ctja_          62 PAWDGRLDEDEIAGVAAYVYDQAA   85 (89)
T ss_dssp             CCCBTTBCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             766778999999999999998745


No 35 
>d1cxca_ a.3.1.1 (A:) Cytochrome c2 {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=20.15  E-value=21  Score=13.62  Aligned_cols=17  Identities=18%  Similarity=0.210  Sum_probs=14.4

Q ss_pred             HCCHHHHHHHHHHHCCH
Q ss_conf             61788999999985488
Q T0637            78 NFTESELKDLNAFYQSP   94 (146)
Q Consensus        78 ~fT~eEl~~liaFY~Sp   94 (146)
                      .++.+|+.+||||.+|-
T Consensus       104 ~l~~~di~DLiAYL~sl  120 (124)
T d1cxca_         104 LKKEADAHNIWAYLQQV  120 (124)
T ss_dssp             CCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHC
T ss_conf             88999999999999873


Done!