Query T0641 3NYI, Eubacterium ventriosum, 296 residues
Match_columns 296
No_of_seqs 123 out of 1231
Neff 7.6
Searched_HMMs 15564
Date Thu Jul 22 15:07:37 2010
Command /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/bin/hhsearch -i /home/syshi_3/CASP9/HHsearch4Targetseq/seq/T0641.hhm -d /home/syshi_2/2008/ferredoxin/manualcheck/update/HHsearch/database/scop70_1.75_hhmdb -o /home/syshi_3/CASP9/HHsearch4Targetseq/scop70search/T0641.hhr
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pzxa_ c.119.1.1 (A:) Hypothe 100.0 0 0 532.4 32.7 285 5-296 3-287 (287)
2 d1mgpa_ c.119.1.1 (A:) Hypothe 100.0 0 0 497.5 26.1 280 2-291 1-284 (285)
3 d1mgpa_ c.119.1.1 (A:) Hypothe 100.0 0 0 497.4 25.7 280 2-291 1-284 (285)
4 d3ct6a1 c.54.1.2 (A:1-123) PTS 93.2 0.3 1.9E-05 25.8 7.9 75 69-159 45-120 (123)
5 d1oi2a_ c.119.1.2 (A:) Dihydro 77.0 2.4 0.00016 19.9 20.5 145 65-227 69-236 (347)
6 d1un8a4 c.119.1.2 (A:1-335) Di 71.8 3.2 0.00021 19.1 19.3 203 65-291 83-309 (335)
7 d2hk6a1 c.92.1.1 (A:2-310) Fer 52.3 7.2 0.00047 16.8 6.9 120 65-199 87-219 (309)
8 d2b82a1 c.108.1.12 (A:4-212) C 50.9 4.8 0.00031 17.9 2.3 26 65-91 84-109 (209)
9 d1r6bx2 c.37.1.20 (X:169-436) 50.4 7 0.00045 16.9 3.1 125 70-211 24-155 (268)
10 d1vhca_ c.1.10.1 (A:) Hypothet 45.6 9.2 0.00059 16.1 6.8 144 46-204 2-163 (212)
11 d1d4ba_ d.15.2.1 (A:) Cell dea 43.6 3.9 0.00025 18.6 0.9 54 2-61 46-99 (122)
12 d2bfdb2 c.48.1.2 (B:205-342) B 41.4 11 0.00068 15.7 4.1 82 81-189 12-93 (138)
13 d3b48a1 c.54.1.2 (A:1-132) Unc 37.9 5 0.00032 17.8 0.7 75 74-158 52-126 (132)
14 d1umdb2 c.48.1.2 (B:188-324) B 32.3 15 0.00094 14.8 4.6 91 81-199 12-105 (137)
15 d1pdoa_ c.54.1.1 (A:) IIA doma 32.2 15 0.00095 14.7 9.7 79 69-159 40-121 (129)
16 d1w85b2 c.48.1.2 (B:193-324) P 30.6 16 0.001 14.6 4.4 91 81-199 6-99 (132)
17 d1usua_ d.14.1.8 (A:) Heat sho 27.8 17 0.0011 14.3 2.2 28 66-93 11-39 (256)
18 d1t9ka_ c.124.1.5 (A:) Probabl 26.1 19 0.0012 14.1 2.6 37 121-157 82-118 (340)
19 d2nqra3 c.57.1.2 (A:178-326) M 26.1 13 0.00082 15.1 1.2 68 9-84 25-92 (149)
20 d1r71a_ a.4.14.1 (A:) Transcri 25.9 17 0.0011 14.3 1.8 51 135-185 20-74 (114)
21 d1hnja1 c.95.1.2 (A:1-174) Ket 25.8 19 0.0012 14.0 4.9 22 179-200 86-107 (174)
22 d1fpza_ c.45.1.1 (A:) Kinase a 25.8 19 0.0012 14.0 7.7 96 65-160 52-152 (176)
23 d1u6ea1 c.95.1.2 (A:-10-174) K 24.9 20 0.0013 13.9 5.1 102 40-146 32-140 (184)
24 d1l5ja2 c.8.2.1 (A:161-372) Ac 24.7 20 0.0013 13.9 2.1 30 74-103 60-94 (212)
25 d1t5oa_ c.124.1.5 (A:) Putativ 24.1 20 0.0013 13.8 4.0 41 121-161 83-123 (340)
26 d2bcgg1 c.3.1.3 (G:5-301) Guan 23.6 21 0.0013 13.8 3.6 33 85-126 6-38 (297)
27 d2obba1 c.108.1.25 (A:1-122) H 23.2 21 0.0014 13.7 4.0 80 64-153 18-121 (122)
28 d2jera1 d.126.1.6 (A:2-365) Ag 22.0 22 0.0014 13.5 3.4 36 251-288 325-360 (364)
29 d2fwha1 c.47.1.1 (A:428-544) T 21.5 23 0.0015 13.5 2.5 11 68-78 8-18 (117)
30 d1r71a_ a.4.14.1 (A:) Transcri 21.5 9.7 0.00062 15.9 -0.2 51 135-185 20-74 (114)
31 d2ozlb2 c.48.1.2 (B:192-329) E 21.4 23 0.0015 13.5 4.2 91 81-199 10-104 (138)
32 d1pdoa_ c.54.1.1 (A:) IIA doma 20.1 24 0.0016 13.3 10.2 80 69-160 40-122 (129)
No 1
>d1pzxa_ c.119.1.1 (A:) Hypothetical protein apc36103 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=0 Score=532.38 Aligned_cols=285 Identities=27% Similarity=0.476 Sum_probs=270.7
Q ss_pred EEEEECCCCCCCHHHHHHCCCEEEEEEEEECCEEEECCCCCCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCC
Q ss_conf 89995057899989998649879899999889478607876898999999983578862323689899999999998658
Q T0641 5 YKIVSDSACDLSKEYLEKHDVTIVPLSVSFDGETYYRDGVDITRDECYQRMVDDPKLFPKTSLPSVESYADVFRSFVEQG 84 (296)
Q Consensus 5 i~IitDSt~dl~~~~~~~~~I~vvPl~I~~~g~~~y~D~~di~~e~~y~~l~~~~~~~pkTS~ps~~~~~~~~~~~~~~g 84 (296)
|+|||||+||||++++++++|+++||+|++||++ |.|++||++++||++|.+++ .|+||||++++|.++|+++.++|
T Consensus 3 iaIvtDS~~dl~~~~~~~~~I~vvPl~i~~~~~~-y~D~~dis~eefy~~l~~~~--~~~TS~ps~~~~~~~~~~~~~~~ 79 (287)
T d1pzxa_ 3 IEIITDSGADLPQSYIREHRIAFLPLVVHWNGQD-YKDGITIEPKQVYDAMRQGH--TVKTAQPSPLAMKELFLPYAKEN 79 (287)
T ss_dssp CEEEEEGGGCCCHHHHHHTTCEEECCEEEETTEE-EEBTTTBCHHHHHHHHTTTC--CCEEECCCHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHCCCEEEEEEEEECCEE-EECCCCCCHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 7999978899999999878968998999999999-87599899999999986499--98647889999999999998489
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEE
Q ss_conf 94999971455435789999999999974789808998265667999999999999997489999999999988741669
Q T0641 85 FPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDALMASARI 164 (296)
Q Consensus 85 ~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~~~~~~~~ 164 (296)
++||++|+||+||||||+|++|++++.+++|+.+|+||||+++|+|+|++|++|++|+++|++++||.++++++++++++
T Consensus 80 ~~vi~i~iSs~LSgtyn~a~~aa~~~~~~~~~~~i~ViDS~~~s~g~g~~v~~a~~~~~~G~s~~ei~~~l~~~~~~~~~ 159 (287)
T d1pzxa_ 80 RPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLTIIDSKCASLGQGLAVMKAVELAKQNTPYNLLCETIESYCRHMEH 159 (287)
T ss_dssp CCEEEEECCTTTCSHHHHHHHHHHHHHHHSTTCCEEEEECCCCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEE
T ss_conf 94999977754346999999999987733788639999688506777899999999998599999999999999728699
Q ss_pred EEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf 99983758875269741789999887547528999878689977515679999999999999974148982699998449
Q T0641 165 FFTVGSLDYLKMGGRIGKVATAATGKLGVKPVIIMKDGDIGLGGIGRNRNKLKNSVLQVAKKYLDENNKDNFIVSVGYGY 244 (296)
Q Consensus 165 ~f~v~~L~~L~kgGRis~~~~~ig~lL~IkPIl~~~~G~i~~~~k~R~~kka~~~~~~~~~~~~~~~~~~~~~i~i~~~~ 244 (296)
||+|+||+||+||||||++++++|++|+|||||++++|++.+.+|+||.+++++++++.+.+..++. ....+.++|++
T Consensus 160 ~f~v~~L~~L~kgGRis~~~~~ig~~L~ikPIl~~~~G~i~~~~k~Rg~kka~~~l~~~~~~~~~~~--~~~~v~i~~~~ 237 (287)
T d1pzxa_ 160 IFTVDNLDYLARGGRISKTAAAFGGLLNIKPLLHVEDGALIPLEKWRGRKKVLKRMVELMGERGDDL--QKQTIGISHAD 237 (287)
T ss_dssp EEECSCHHHHHHHTSCC----------CEEEEEEEETTEEEEEEEEESHHHHHHHHHHHHHHHCSSG--GGSEEEEEESS
T ss_pred EEEECCHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHCCC--CCCEEEEEECC
T ss_conf 9994977999877973678999986206348999619989998887008899999999999862368--87289999489
Q ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCEEEEEEEECCCCC
Q ss_conf 9899999999999873862222689862655675305450999998412159
Q T0641 245 DKEEGFEFMKEVESTLDVKLDSETNVAIGIVSAVHTGPYPIGLGVIRKYETL 296 (296)
Q Consensus 245 ~~e~~~~~~~~l~~~~~~~~~~~~~~~i~~vi~~H~Gpg~igi~~~~k~~~l 296 (296)
+++++.++.+.+++.++. .++.+.++||++++|+|||++|++|++||-.+
T Consensus 238 ~~e~~~~l~~~l~~~~~~--~~i~~~~i~~vi~~H~Gpga~gv~~~~k~~~~ 287 (287)
T d1pzxa_ 238 DEETALELKQMIEETHGC--TRFFLSDIGSAIGAHAGPGTIALFFLNKYIEI 287 (287)
T ss_dssp CHHHHHHHHHHHHHHTCC--CEEEEEECCHHHHHHHCTTCEEEEEESSCCCC
T ss_pred CHHHHHHHHHHHHHHCCC--CCEEEEEECCEEEEEECCCEEEEEEEEEECCC
T ss_conf 999999999999877699--81999985729999826895999999861049
No 2
>d1mgpa_ c.119.1.1 (A:) Hypothetical protein TM841 {Thermotoga maritima [TaxId: 2336]} SCOP: d1vpva_ d1pzxb_ d1pzxa_
Probab=100.00 E-value=0 Score=497.52 Aligned_cols=280 Identities=25% Similarity=0.381 Sum_probs=256.7
Q ss_pred CCEEEEEECCCCCCCHHHHHHCCCEEEEEEEEECCEE-EECCCCCCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH
Q ss_conf 8218999505789998999864987989999988947-860787689899999998357886232368989999999999
Q T0641 2 NAMYKIVSDSACDLSKEYLEKHDVTIVPLSVSFDGET-YYRDGVDITRDECYQRMVDDPKLFPKTSLPSVESYADVFRSF 80 (296)
Q Consensus 2 ~~mi~IitDSt~dl~~~~~~~~~I~vvPl~I~~~g~~-~y~D~~di~~e~~y~~l~~~~~~~pkTS~ps~~~~~~~~~~~ 80 (296)
|+.|+|||||+||||+++++++||+++||+|+++|++ +++|+.+++.++||++|.+.+ ..|+||||||++|.++|+++
T Consensus 1 ~Mki~IitDSs~dl~~~~~~~~~I~viPl~i~~~d~~~~~~d~~~~~~~~fy~~l~~~~-~~p~TSqps~~~~~~~~~~~ 79 (285)
T d1mgpa_ 1 HMKVKILVDSTADVPFSWMEKYDIDSIPLYVVWEDGRSEPDEREPEEIMNFYKRIREAG-SVPKTSQPSVEDFKKRYLKY 79 (285)
T ss_dssp CCCEEEEEEGGGCCCTTHHHHTTEEEECCEEECTTSCEEECCCCHHHHHHHHHHHHHCS-SCCEEECCCHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCHHHHHHCCCEEEEEEEEECCEEEECCCCCCCCHHHHHHHHHHCC-CCCEECCCCHHHHHHHHHHH
T ss_conf 96499996235789889997639789899999768177306886468899999997178-97332378989999999999
Q ss_pred HHCCCC-EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 865894-9999714554357899999999999747898089982656679999999999999974899999999999887
Q T0641 81 VEQGFP-VVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDALM 159 (296)
Q Consensus 81 ~~~g~~-vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~~~ 159 (296)
.++||+ ||++|+||+||||||+|++|++++ +.+|+|+||+++|+|+|++|++|++|+++|++++||++++++.+
T Consensus 80 ~~~gyd~ii~i~iSs~lSgty~~a~~a~~~~-----~~~i~ViDS~~~s~~~g~~v~~a~~~~~~G~~~~ei~~~l~~~~ 154 (285)
T d1mgpa_ 80 KEEDYDVVLVLTLSSKLSGTYNSAVLASKEV-----DIPVYVVDTLLASGAIPLPARVAREMLENGATIEEVLKKLDERM 154 (285)
T ss_dssp HHTTCSEEEEEESCTTTCSHHHHHHHHHHHS-----SSCEEEEECSCCGGGTHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCCHHHHHHHHHHHHHHHC-----CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 9648989999952421459999999999704-----89789992452356899999999999972899999999999876
Q ss_pred HCC--EEEEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 416--699998375887526974178999988754752899987868997751567999999999999997414898269
Q T0641 160 ASA--RIFFTVGSLDYLKMGGRIGKVATAATGKLGVKPVIIMKDGDIGLGGIGRNRNKLKNSVLQVAKKYLDENNKDNFI 237 (296)
Q Consensus 160 ~~~--~~~f~v~~L~~L~kgGRis~~~~~ig~lL~IkPIl~~~~G~i~~~~k~R~~kka~~~~~~~~~~~~~~~~~~~~~ 237 (296)
+++ ++||+|+||+||+||||||++++++|++|+|||||++++|++.+.+|+||++||++++++.+.+...++ ....
T Consensus 155 ~~~~~~~~~~v~~L~~L~kgGRis~~~a~ig~lL~IkPIl~~~~G~~~~~~k~R~~kka~~~l~~~i~~~~~~~--~~~~ 232 (285)
T d1mgpa_ 155 KNKDFKAIFYVSNFDYLVKGGRVSKFQGFVGNLLKIRVCLHIENGELIPYRKVRGDKKAIEALIEKLREDTPEG--SKLR 232 (285)
T ss_dssp HTTCEEEEEEESCTHHHHHHTCC---------CTTEEEEEEEETTEEEEEEEEESHHHHHHHHHHHHHTTSCTT--CEEE
T ss_pred HCCEEEEEEEECCHHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHCCC--CCEE
T ss_conf 01707899987355888646861367998755652317999988844897421668899999999999960378--8269
Q ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCEEEEEEEE
Q ss_conf 999844998999999999998738622226898626556753054509999984
Q T0641 238 VSVGYGYDKEEGFEFMKEVESTLDVKLDSETNVAIGIVSAVHTGPYPIGLGVIR 291 (296)
Q Consensus 238 i~i~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~i~~vi~~H~Gpg~igi~~~~ 291 (296)
+.+.|+++++++.++.+++++.++. .++.+.++||++++|+|||++|+++-.
T Consensus 233 i~i~~~~~~~~~~~l~~~l~~~~~~--~~i~i~~~g~~i~~H~Gpgaigi~i~~ 284 (285)
T d1mgpa_ 233 VIGVHADNEAGVVELLNTLRKSYEV--VDEIISPMGKVITTHVGPGTVGFGIEV 284 (285)
T ss_dssp EEEEESSCHHHHHHHHHHHTTTSEE--EEEEEEECCHHHHHHHCTTCEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHHHCCC--CCEEEEECCCEEEEECCCCEEEEEEEE
T ss_conf 9998539989999999999985598--618985312021302286758998873
No 3
>d1mgpa_ c.119.1.1 (A:) Hypothetical protein TM841 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=0 Score=497.36 Aligned_cols=280 Identities=25% Similarity=0.374 Sum_probs=257.3
Q ss_pred CCEEEEEECCCCCCCHHHHHHCCCEEEEEEEEECCEEEE-CCCCCCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH
Q ss_conf 821899950578999899986498798999998894786-0787689899999998357886232368989999999999
Q T0641 2 NAMYKIVSDSACDLSKEYLEKHDVTIVPLSVSFDGETYY-RDGVDITRDECYQRMVDDPKLFPKTSLPSVESYADVFRSF 80 (296)
Q Consensus 2 ~~mi~IitDSt~dl~~~~~~~~~I~vvPl~I~~~g~~~y-~D~~di~~e~~y~~l~~~~~~~pkTS~ps~~~~~~~~~~~ 80 (296)
|+.|+|||||+||||++++++++|+++||+|+++|+++| +|+++++.++||++|.+.+ ..|+|||||+++|.++|+++
T Consensus 1 ~MKi~IitDS~~dl~~~~~~~~~I~vvPl~i~~~d~~~~~~d~~~~~~~~fy~~~~~~~-~~p~TS~ps~~~~~~~~~~~ 79 (285)
T d1mgpa_ 1 HMKVKILVDSTADVPFSWMEKYDIDSIPLYVVWEDGRSEPDEREPEEIMNFYKRIREAG-SVPKTSQPSVEDFKKRYLKY 79 (285)
T ss_dssp CCCEEEEEEGGGCCCTTHHHHTTEEEECCEEECTTSCEEECCCCHHHHHHHHHHHHHCS-SCCEEECCCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHCCCEEEEEEEEECCEEEEECCCCCCCHHHHHHHHHHCC-CCCCCCCCCHHHHHHHHHHH
T ss_conf 99889999788999999998789789807999988389825887478999999998579-98741689999999999999
Q ss_pred HHCCCC-EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 865894-9999714554357899999999999747898089982656679999999999999974899999999999887
Q T0641 81 VEQGFP-VVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDALM 159 (296)
Q Consensus 81 ~~~g~~-vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~~~ 159 (296)
.++||+ |+++|+||+||||||+|++|++. .+.+|+||||+++|+|+|++|++|++|+++|.+++||++++++.+
T Consensus 80 ~~~gyd~vi~i~iSs~lSgty~~a~~a~~~-----~~~~v~ViDS~~~s~g~g~~v~~a~~~~~~G~s~~ei~~~l~~~~ 154 (285)
T d1mgpa_ 80 KEEDYDVVLVLTLSSKLSGTYNSAVLASKE-----VDIPVYVVDTLLASGAIPLPARVAREMLENGATIEEVLKKLDERM 154 (285)
T ss_dssp HHTTCSEEEEEESCTTTCSHHHHHHHHHHH-----SSSCEEEEECSCCGGGTHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHCCCCCEEEEECCCHHHHHHHHHHHHHHH-----CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 865998389995573050799999999971-----699689972554306689999999999885999999999999986
Q ss_pred HCC--EEEEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 416--699998375887526974178999988754752899987868997751567999999999999997414898269
Q T0641 160 ASA--RIFFTVGSLDYLKMGGRIGKVATAATGKLGVKPVIIMKDGDIGLGGIGRNRNKLKNSVLQVAKKYLDENNKDNFI 237 (296)
Q Consensus 160 ~~~--~~~f~v~~L~~L~kgGRis~~~~~ig~lL~IkPIl~~~~G~i~~~~k~R~~kka~~~~~~~~~~~~~~~~~~~~~ 237 (296)
+++ ++||+|+||+||+||||||++++++|++||||||+++++|++.+.+|+||.+++++++++.+.++.++ .....
T Consensus 155 ~~~~~~~~~~v~~L~~L~kgGRi~~~~a~ig~~L~ikPIl~~~~G~i~~~~k~R~~kka~~~l~~~~~~~~~~--~~~~~ 232 (285)
T d1mgpa_ 155 KNKDFKAIFYVSNFDYLVKGGRVSKFQGFVGNLLKIRVCLHIENGELIPYRKVRGDKKAIEALIEKLREDTPE--GSKLR 232 (285)
T ss_dssp HTTCEEEEEEESCTHHHHHHTCC---------CTTEEEEEEEETTEEEEEEEEESHHHHHHHHHHHHHTTSCT--TCEEE
T ss_pred HCCEEEEEEEECCHHHHHHCCEEHHHHHHHHHHHCCEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHCC--CCCEE
T ss_conf 4370699999188899975890168899988763654778943986999877511889999999999986215--89719
Q ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCEEEEEEEE
Q ss_conf 999844998999999999998738622226898626556753054509999984
Q T0641 238 VSVGYGYDKEEGFEFMKEVESTLDVKLDSETNVAIGIVSAVHTGPYPIGLGVIR 291 (296)
Q Consensus 238 i~i~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~i~~vi~~H~Gpg~igi~~~~ 291 (296)
+.+.|+++++++++|.+++++.++. .++.+.++||++++|+|||++|+++..
T Consensus 233 ~~i~~~~~~e~a~~l~~~l~~~~~~--~~i~~~~~~~~i~~h~Gpga~gv~i~~ 284 (285)
T d1mgpa_ 233 VIGVHADNEAGVVELLNTLRKSYEV--VDEIISPMGKVITTHVGPGTVGFGIEV 284 (285)
T ss_dssp EEEEESSCHHHHHHHHHHHTTTSEE--EEEEEEECCHHHHHHHCTTCEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHHHCCC--CCEEEEECCCEEEEEECCCEEEEEEEE
T ss_conf 9999698999999999999856799--869999806299996138829999997
No 4
>d3ct6a1 c.54.1.2 (A:1-123) PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM {Lactococcus lactis [TaxId: 1358]}
Probab=93.16 E-value=0.3 Score=25.85 Aligned_cols=75 Identities=16% Similarity=0.210 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEE-ECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98999999999986589499997-14554357899999999999747898089982656679999999999999974899
Q T0641 69 SVESYADVFRSFVEQGFPVVCFT-ITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLS 147 (296)
Q Consensus 69 s~~~~~~~~~~~~~~g~~vi~i~-iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~s 147 (296)
++..+.+..++. .++.++.+. +.| ...++ +++.++ .+.+|+++|.-.+ ..++.|+..+..|.+
T Consensus 45 ~~~~I~~~I~~~--~~~GvlvlvDmGS----~~~~~----e~~~e~-~~~~v~ii~~p~t-----egal~Aa~~a~~g~~ 108 (123)
T d3ct6a1 45 SFDRVMNAIEEN--EADNLLTFFDLGS----ARMNL----DLVSEM-TDKELTIFNVPLI-----EGAYTASALLEAGAT 108 (123)
T ss_dssp CHHHHHHHHHHS--SCSEEEEEESSGG----GHHHH----HHHHHT-CSSEEEECCSCHH-----HHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHC--CCCCEEEEEECCH----HHHHH----HHHHHH-HCCCEEEECCCHH-----HHHHHHHHHHHCCCC
T ss_conf 999999999852--8897799984553----99999----999986-2898899857638-----999999999867999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999887
Q T0641 148 FEQAMSKLDALM 159 (296)
Q Consensus 148 ~~ei~~~l~~~~ 159 (296)
+++|.+.+++..
T Consensus 109 leeI~~~~~~~~ 120 (123)
T d3ct6a1 109 FEAIKEQLEKML 120 (123)
T ss_dssp HHHHHHHHGGGC
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999865
No 5
>d1oi2a_ c.119.1.2 (A:) Dihydroxyacetone kinase subunit K, DhaK {Escherichia coli [TaxId: 562]}
Probab=76.99 E-value=2.4 Score=19.89 Aligned_cols=145 Identities=12% Similarity=0.106 Sum_probs=95.3
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE-------C-----CHHHHHHH
Q ss_conf 23689899999999998658949999714554357899999999999747898089982-------6-----56679999
Q T0641 65 TSLPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVID-------S-----KQNTVTQA 132 (296)
Q Consensus 65 TS~ps~~~~~~~~~~~~~~g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViD-------S-----~~~s~~~g 132 (296)
-+.||+..+.++.+.. +.+.-||+|- .--+|=.=|.-+|+++...+.-+.+..+++ + |-.-+|.-
T Consensus 69 FaSPs~~qI~~aik~v-~~~~GvLliv--~NYtGDvlNF~mA~E~a~~egi~v~~vvv~DDva~~~~~~~~gRRG~AGtv 145 (347)
T d1oi2a_ 69 FTSPTPDKIFECAMQV-DGGEGVLLII--KNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTV 145 (347)
T ss_dssp TSCCCHHHHHHHHHHH-CCSSCEEEEE--ESSHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCBSCTTCSSBCCCTHHH
T ss_pred CCCCCHHHHHHHHHHH-CCCCCEEEEE--CCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 4688768999999963-3899889996--265021116799999999659866999958854568765434577652378
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCEEEE------
Q ss_conf 99999999997489999999999988741669999837588752697417899998875475289998786899------
Q T0641 133 LLIDQFVRMLEDGLSFEQAMSKLDALMASARIFFTVGSLDYLKMGGRIGKVATAATGKLGVKPVIIMKDGDIGL------ 206 (296)
Q Consensus 133 ~lv~~a~~l~~~G~s~~ei~~~l~~~~~~~~~~f~v~~L~~L~kgGRis~~~~~ig~lL~IkPIl~~~~G~i~~------ 206 (296)
++-.-|-.++++|.+++||.+..++..+++.+.-+--+- .-++... +|...+.+|+++.
T Consensus 146 lv~KiaGAaAe~G~~Ldev~~~a~~~~~~~~Tigvals~------c~vP~~g---------~~~f~L~~~emE~GmGIHG 210 (347)
T d1oi2a_ 146 LIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGA------CTVPAAG---------KPSFTLADNEMEFGVGIHG 210 (347)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHTTEEEEEEEEEC------C--------------------CCTTEEEETCCTTS
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECC------CCCCCCC---------CCCCCCCCCCEECCCCCCC
T ss_conf 999999999863999999999999998621456677047------7788889---------9775249985232655369
Q ss_pred -----EEEECCHHHHHHHHHHHHHHH
Q ss_conf -----775156799999999999999
Q T0641 207 -----GGIGRNRNKLKNSVLQVAKKY 227 (296)
Q Consensus 207 -----~~k~R~~kka~~~~~~~~~~~ 227 (296)
..+..+.+...+.|++.+...
T Consensus 211 EpG~~r~~~~~a~~lv~~m~~~ll~~ 236 (347)
T d1oi2a_ 211 EPGIDRRPFSSLDQTVDEMFDTLLVN 236 (347)
T ss_dssp CCCSEEEECCCHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 98754667899899999999999723
No 6
>d1un8a4 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citrobacter freundii [TaxId: 546]}
Probab=71.84 E-value=3.2 Score=19.07 Aligned_cols=203 Identities=12% Similarity=-0.007 Sum_probs=118.0
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEE---EEC--------CHHHHHHHH
Q ss_conf 236898999999999986589499997145543578999999999997478980899---826--------566799999
Q T0641 65 TSLPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICV---IDS--------KQNTVTQAL 133 (296)
Q Consensus 65 TS~ps~~~~~~~~~~~~~~g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~V---iDS--------~~~s~~~g~ 133 (296)
-+.|++..+.++.+.. ..+.-||++- .--+|-.=|.-+|+++...+- .+|.. -|- |-.-+|.-+
T Consensus 83 FaSPs~~~I~~aikav-~~~~GvL~iv--~NYtGDvlNF~mA~E~a~~~G--i~v~~v~v~DDva~~~~~~rRGlAGtvl 157 (335)
T d1un8a4 83 FASPSVDAVLTAIQAV-TGEAGCLLIV--KNYTGDRLNFGLAAEKARRLG--YNVEMLIVGDDISLPDNKHPRGIAGTIL 157 (335)
T ss_dssp TSCCCHHHHHHHHHHH-CCTTCEEEEE--ESCHHHHHHHHHHHHHHHHTT--CCEEEEEECCBCSCTTCSSCCCCTTHHH
T ss_pred CCCCCHHHHHHHHHHH-CCCCCEEEEE--EECCCCCCCHHHHHHHHHCCC--CCEEEEEECCCCCCCCCCCCCCCCCHHH
T ss_conf 4788999999999951-6899789995--214021046899999987137--8657997466457888888861230769
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCEEEE-------
Q ss_conf 9999999997489999999999988741669999837588752697417899998875475289998786899-------
Q T0641 134 LIDQFVRMLEDGLSFEQAMSKLDALMASARIFFTVGSLDYLKMGGRIGKVATAATGKLGVKPVIIMKDGDIGL------- 206 (296)
Q Consensus 134 lv~~a~~l~~~G~s~~ei~~~l~~~~~~~~~~f~v~~L~~L~kgGRis~~~~~ig~lL~IkPIl~~~~G~i~~------- 206 (296)
+-.-|-.++++|.+++|+.+..++..+++++.-+--+--.+=-.|+ |-..+.+|+++.
T Consensus 158 v~KiaGAaAe~G~sL~ev~~~~~~~~~~~~Tigval~~c~vP~~~~---------------~~f~l~~~e~E~GmGIHGE 222 (335)
T d1un8a4 158 VHKIAGYFAERGYNLATVLREAQYAASNTFSLGVALSSCHLPQETD---------------AAPRHHPGHAELGMGIHGE 222 (335)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEEEEECCCCSSCCS---------------SSCCBCTTCEEETCCTTCC
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC---------------CCCCCCCCCEEEECCCCCC
T ss_conf 9999999997297789999999999961646752026776888898---------------7776799817760144688
Q ss_pred ----EEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE--CCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEE
Q ss_conf ----775156799999999999999741489826999984--49989999999999987386222268986265567530
Q T0641 207 ----GGIGRNRNKLKNSVLQVAKKYLDENNKDNFIVSVGY--GYDKEEGFEFMKEVESTLDVKLDSETNVAIGIVSAVHT 280 (296)
Q Consensus 207 ----~~k~R~~kka~~~~~~~~~~~~~~~~~~~~~i~i~~--~~~~e~~~~~~~~l~~~~~~~~~~~~~~~i~~vi~~H~ 280 (296)
..+..+.+...+.|++.+....+. .+.+.+.+-. +-...|..-+.+++.+.+......+. ...|.-+++-=
T Consensus 223 pG~~r~~~~~a~eiv~~l~~~l~~~~~~--gd~v~llVN~LG~ts~lEl~i~~~~v~~~L~~~~i~v~-~~~G~~~TSld 299 (335)
T d1un8a4 223 PGASVIDTQNSAQVVNLMVDKLLAALPE--TGRLAVMINNLGGVSVAEMAIITRELASSPLHSRIDWL-IGPASLVTALD 299 (335)
T ss_dssp CCSEEESCCBHHHHHHHHHHHHHHHSCS--SCCEEEEEEECBCSCHHHHHHHHHHHHTSTTGGGEEEE-EEEECSSCCTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEE-EEEEEEECCCC
T ss_conf 7745678899999999999998613589--98089998489997399999999999999985597099-97530527668
Q ss_pred CCCEEEEEEEE
Q ss_conf 54509999984
Q T0641 281 GPYPIGLGVIR 291 (296)
Q Consensus 281 Gpg~igi~~~~ 291 (296)
.+ .+++..++
T Consensus 300 m~-G~SlTll~ 309 (335)
T d1un8a4 300 MK-GFSLTAIV 309 (335)
T ss_dssp BE-EEEEEEEE
T ss_pred CC-CEEEEEEE
T ss_conf 98-70899995
No 7
>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]}
Probab=52.32 E-value=7.2 Score=16.77 Aligned_cols=120 Identities=17% Similarity=0.119 Sum_probs=74.5
Q ss_pred ECCCCHHHHHHHHHHHHHCCC-CEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 236898999999999986589-499997145543-578999999999997478980899826566799999999999999
Q T0641 65 TSLPSVESYADVFRSFVEQGF-PVVCFTITTLFS-GSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRML 142 (296)
Q Consensus 65 TS~ps~~~~~~~~~~~~~~g~-~vi~i~iSs~lS-gty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~ 142 (296)
-+.|+++ ++++++.++|. +++.+++.-.-| .|..++........++.+..++++|++..--.+.--...
T Consensus 87 y~~P~i~---~~l~~l~~~g~~~ii~lpLyPqyS~~T~~s~~~~~~~~~~~~~~~~~~~I~~~~~~p~yi~a~a------ 157 (309)
T d2hk6a1 87 HIEPFIE---DAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLGGLTITSVESWYDEPKFVTYWV------ 157 (309)
T ss_dssp SSSSBHH---HHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHHHHHHHHHHHCSCEEEECCCCTTCHHHHHHHH------
T ss_pred CCCCCHH---HHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH------
T ss_conf 1566187---7999998448854025665553265640269999999985255775599656578834899999------
Q ss_pred HCCCCHHHHHHHHH----HHHHCCEEEEEECCHH-HHHHCC-----CCHHHHHHHHHHHCCCEE-EEE
Q ss_conf 74899999999999----8874166999983758-875269-----741789999887547528-999
Q T0641 143 EDGLSFEQAMSKLD----ALMASARIFFTVGSLD-YLKMGG-----RIGKVATAATGKLGVKPV-IIM 199 (296)
Q Consensus 143 ~~G~s~~ei~~~l~----~~~~~~~~~f~v~~L~-~L~kgG-----Ris~~~~~ig~lL~IkPI-l~~ 199 (296)
+.|.+.++ ..++.....|.-..+- .-.++| .+-.++..++..|+..+. +.+
T Consensus 158 ------~~I~~~~~~~~~~~~~~~~llfS~HgiP~~~~~~gdpY~~~~~~t~~~i~~~l~~~~~~~~f 219 (309)
T d2hk6a1 158 ------DRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAKLIAEGAGVSEYAVGW 219 (309)
T ss_dssp ------HHHHHHHHHSCHHHHTSEEEEEEEECCBGGGGGGTCCHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred ------HHHHHHHHHCCHHHCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf ------99999998586431686348612655524466459961899999999999864876069987
No 8
>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}
Probab=50.93 E-value=4.8 Score=17.94 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=16.7
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 236898999999999986589499997
Q T0641 65 TSLPSVESYADVFRSFVEQGFPVVCFT 91 (296)
Q Consensus 65 TS~ps~~~~~~~~~~~~~~g~~vi~i~ 91 (296)
.|.|-++ ..++++.+.+.|.+|+++|
T Consensus 84 ~A~p~pg-a~~fl~~~~~~Gv~IfyVT 109 (209)
T d2b82a1 84 FSIPKEV-ARQLIDMHVRRGDAIFFVT 109 (209)
T ss_dssp GCEECHH-HHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCHH-HHHHHHHHHHCCCEEEEEE
T ss_conf 4676624-9999999997597499993
No 9
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=50.45 E-value=7 Score=16.87 Aligned_cols=125 Identities=15% Similarity=0.157 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHCCCC-EEEEEECCCCCHHHHHHHH-HHHHHHHH----CCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999865894-9999714554357899999-99999974----789808998265667999999999999997
Q T0641 70 VESYADVFRSFVEQGFP-VVCFTITTLFSGSYNSAIN-AKSLVLED----YPDANICVIDSKQNTVTQALLIDQFVRMLE 143 (296)
Q Consensus 70 ~~~~~~~~~~~~~~g~~-vi~i~iSs~lSgty~~a~~-a~~~~~~~----~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~ 143 (296)
-.++.++.+-+....-. ++.+.-+. . |--.-+.. |......+ ..+.+|+.+|....-.|..+
T Consensus 24 d~Ei~~l~~iL~r~~k~n~lLVG~~G-v-GKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~liag~~~---------- 91 (268)
T d1r6bx2 24 EKELERAIQVLCRRRKNNPLLVGESG-V-GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY---------- 91 (268)
T ss_dssp HHHHHHHHHHHTSSSSCEEEEECCTT-S-SHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---CCCCC----------
T ss_pred HHHHHHHHHHHHCCCCCCCEEECCCC-C-CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHCCCCC----------
T ss_conf 99999999999547668967988898-8-67799999999998178450003541278640567506763----------
Q ss_pred CCCCHHHHH-HHHHHHHHCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEEEEC
Q ss_conf 489999999-99998874166999983758875269741789999887547528999878689977515
Q T0641 144 DGLSFEQAM-SKLDALMASARIFFTVGSLDYLKMGGRIGKVATAATGKLGVKPVIIMKDGDIGLGGIGR 211 (296)
Q Consensus 144 ~G~s~~ei~-~~l~~~~~~~~~~f~v~~L~~L~kgGRis~~~~~ig~lL~IkPIl~~~~G~i~~~~k~R 211 (296)
.-.+++-. ..++.+...-...+++|++..|...|+-++...-++++| ||.|. .|++.+++-+.
T Consensus 92 -~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~L--kp~L~--rg~i~vIgatT 155 (268)
T d1r6bx2 92 -RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLI--KPLLS--SGKIRVIGSTT 155 (268)
T ss_dssp -SSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHH--SSCSS--SCCCEEEEEEC
T ss_pred -CHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHH--HHHHH--CCCCEEEEECC
T ss_conf -005899999999986126784688433698862777788641179876--48874--79875999579
No 10
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=45.60 E-value=9.2 Score=16.09 Aligned_cols=144 Identities=16% Similarity=0.181 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 89899999998357886232368989999999999865894999971455435789999999999974789808998265
Q T0641 46 ITRDECYQRMVDDPKLFPKTSLPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSK 125 (296)
Q Consensus 46 i~~e~~y~~l~~~~~~~pkTS~ps~~~~~~~~~~~~~~g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~ 125 (296)
.+.+++.+++.+. +..|---..+.++..+.-+.+.+.|-.++=+|+.+. +|..+.+.+.++||+..|
T Consensus 2 ~~~~~~~~~l~~~-~iipvlr~~~~~~~~~~~~al~~~Gi~~iEitl~~~------~a~~~I~~l~~~~p~~~v------ 68 (212)
T d1vhca_ 2 YTTQQIIEKLREL-KIVPVIALDNADDILPLADTLAKNGLSVAEITFRSE------AAADAIRLLRANRPDFLI------ 68 (212)
T ss_dssp CCHHHHHHHHHHH-CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTST------THHHHHHHHHHHCTTCEE------
T ss_pred CCHHHHHHHHHHC-CEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCH------HHHHHHHHHHHCCCCCEE------
T ss_conf 7589999999879-989999689999999999999987998899957881------589999999862887347------
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCH-------HHHHHHHHH-HHHCCEEEEEECCHHHHHHCC-C--------CHHHHHHHH
Q ss_conf 66799999999999999748999-------999999998-874166999983758875269-7--------417899998
Q T0641 126 QNTVTQALLIDQFVRMLEDGLSF-------EQAMSKLDA-LMASARIFFTVGSLDYLKMGG-R--------IGKVATAAT 188 (296)
Q Consensus 126 ~~s~~~g~lv~~a~~l~~~G~s~-------~ei~~~l~~-~~~~~~~~f~v~~L~~L~kgG-R--------is~~~~~ig 188 (296)
+.|.-+-...+.+.++.|.+| +++.+...+ -....-..++|...-...+-| + .......+-
T Consensus 69 --GaGTV~~~~~~~~a~~aGa~FivSP~~~~~v~~~a~~~~i~~iPGv~TpsEi~~A~~~G~~~vK~FPA~~~gG~~~lk 146 (212)
T d1vhca_ 69 --AAGTVLTAEQVVLAKSSGADFVVTPGLNPKIVKLCQDLNFPITPGVNNPMAIEIALEMGISAVKFFPAEASGGVKMIK 146 (212)
T ss_dssp --EEESCCSHHHHHHHHHHTCSEEECSSCCHHHHHHHHHTTCCEECEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHH
T ss_pred --EEEECCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
T ss_conf --663146589999998617868977888799999998559971688688899999998799979975543222489999
Q ss_pred HHHCCCEEEEEE-CCEE
Q ss_conf 875475289998-7868
Q T0641 189 GKLGVKPVIIMK-DGDI 204 (296)
Q Consensus 189 ~lL~IkPIl~~~-~G~i 204 (296)
.+...-|=+.|- -|.+
T Consensus 147 al~~p~p~~~~~ptGGV 163 (212)
T d1vhca_ 147 ALLGPYAQLQIMPTGGI 163 (212)
T ss_dssp HHHTTTTTCEEEEBSSC
T ss_pred HHHCCCCCCEEEECCCC
T ss_conf 87561348728853898
No 11
>d1d4ba_ d.15.2.1 (A:) Cell death-inducing effector B (CIDE-B), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.61 E-value=3.9 Score=18.57 Aligned_cols=54 Identities=19% Similarity=0.246 Sum_probs=39.8
Q ss_pred CCEEEEEECCCCCCCHHHHHHCCCEEEEEEEEECCEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 821899950578999899986498798999998894786078768989999999835788
Q T0641 2 NAMYKIVSDSACDLSKEYLEKHDVTIVPLSVSFDGETYYRDGVDITRDECYQRMVDDPKL 61 (296)
Q Consensus 2 ~~mi~IitDSt~dl~~~~~~~~~I~vvPl~I~~~g~~~y~D~~di~~e~~y~~l~~~~~~ 61 (296)
+..+.|+++|-.+|-..-.++++|.- |+.+.. +.||.+++.|+||+-+..+..+
T Consensus 46 s~rkGV~A~SL~EL~~K~~~~L~i~~-~~~lvL-----eeDGT~Vd~EeYFqtL~~nT~l 99 (122)
T d1d4ba_ 46 TIRKGLTAATRQELLAKALETLLLNG-VLTLVL-----EEDGTAVDSEDFFQLLEDDTCL 99 (122)
T ss_dssp SCEEEEEECCSSTHHHHHHHHHSCCS-SCEEEE-----TTTTEEECSTHHHHHSSSCCCC
T ss_pred CEEEEEECCCHHHHHHHHHHHHCCCC-CEEEEE-----ECCCCEECCHHHHHCCCCCCEE
T ss_conf 70565871899999999999839998-738999-----4799798742676426789799
No 12
>d2bfdb2 c.48.1.2 (B:205-342) Branched-chain alpha-keto acid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.35 E-value=11 Score=15.67 Aligned_cols=82 Identities=11% Similarity=0.119 Sum_probs=46.8
Q ss_pred HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 86589499997145543578999999999997478980899826566799999999999999748999999999998874
Q T0641 81 VEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDALMA 160 (296)
Q Consensus 81 ~~~g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~~~~ 160 (296)
..+|.|+..++.+ ++...|..|++.+.+++ +..+.|||-+++.. .+.+.|.+. ..
T Consensus 12 ~~~G~DitIis~G----~~~~~al~aa~~L~~~~-gi~~~vid~~~l~P----------------lD~~~i~~s----~~ 66 (138)
T d2bfdb2 12 IQEGSDVTLVAWG----TQVHVIREVASMAKEKL-GVSCEVIDLRTIIP----------------WDVDTICKS----VI 66 (138)
T ss_dssp EECCSSEEEEECT----THHHHHHHHHHHHHHHH-CCCEEEEECCEEES----------------CCHHHHHHH----HH
T ss_pred EEECCEEEEEECH----HHHHHHHHHHHHHHHCC-CCCEEEEEECCCCC----------------CCHHHHHHH----HC
T ss_conf 9948809999770----88999999998777407-95526654202355----------------541888887----53
Q ss_pred CCEEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 16699998375887526974178999988
Q T0641 161 SARIFFTVGSLDYLKMGGRIGKVATAATG 189 (296)
Q Consensus 161 ~~~~~f~v~~L~~L~kgGRis~~~~~ig~ 189 (296)
++.-.+++++=. ..||==+.+++.+..
T Consensus 67 kt~~livvee~~--~~gG~gs~i~~~l~~ 93 (138)
T d2bfdb2 67 KTGRLLISHEAP--LTGGFASEISSTVQE 93 (138)
T ss_dssp HHSCEEEEEEEE--STTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCC--CCCCHHHHHHHHHHH
T ss_conf 468699953765--306089999999987
No 13
>d3b48a1 c.54.1.2 (A:1-132) Uncharacterized protein EF1359 {Enterococcus faecalis [TaxId: 1351]}
Probab=37.89 E-value=5 Score=17.84 Aligned_cols=75 Identities=12% Similarity=0.066 Sum_probs=43.0
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 99999998658949999714554357899999999999747898089982656679999999999999974899999999
Q T0641 74 ADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMS 153 (296)
Q Consensus 74 ~~~~~~~~~~g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~ 153 (296)
.+.++++ ..++.||+++ .=+|||.++.. +.... ++.....|..++. +.-..+..++.....|.++++|++
T Consensus 52 ~~~i~~~-~~~~gvlvl~--Dl~ggsp~~~~-~~~~~-~~~~~~~I~gvN~-----p~l~~al~~~~~~~~~~~l~ei~~ 121 (132)
T d3b48a1 52 IDTINEA-DSDREFLIFA--DLGSAVLSSEL-AFDML-EEDQQKHYHLVDA-----PLVEGAFASAITAGVSDDLTQILA 121 (132)
T ss_dssp HHHHHHS-CSSCEEEEEE--CSHHHHHHHHH-HHHHS-CHHHHTTEEECCS-----CHHHHHHHHHHHHC-CCCHHHHHH
T ss_pred HHHHHHC-CCCCCEEEEE--ECCCCCHHHHH-HHHHH-CCCCCEEEEEECH-----HHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 9999950-7899689998--47887513999-99970-5766137876452-----279999999998754999999999
Q ss_pred HHHHH
Q ss_conf 99988
Q T0641 154 KLDAL 158 (296)
Q Consensus 154 ~l~~~ 158 (296)
.+.+.
T Consensus 122 ~a~~a 126 (132)
T d3b48a1 122 EAQNA 126 (132)
T ss_dssp HHHTC
T ss_pred HHHHH
T ss_conf 99999
No 14
>d1umdb2 c.48.1.2 (B:188-324) Branched-chain alpha-keto acid dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=32.35 E-value=15 Score=14.75 Aligned_cols=91 Identities=15% Similarity=0.181 Sum_probs=51.2
Q ss_pred HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 86589499997145543578999999999997478980899826566799999999999999748999999999998874
Q T0641 81 VEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDALMA 160 (296)
Q Consensus 81 ~~~g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~~~~ 160 (296)
..+|.++..++.+.. ...|..|++.+.++ +..+.|||-+++.. .+.+.+. +...
T Consensus 12 ~r~G~dvtiis~G~~----~~~al~aa~~L~~~--gi~~~vid~~~lkP----------------lD~~~i~----~sv~ 65 (137)
T d1umdb2 12 RREGKDLTLICYGTV----MPEVLQAAAELAKA--GVSAEVLDLRTLMP----------------WDYEAVM----NSVA 65 (137)
T ss_dssp EECCSSEEEEECGGG----HHHHHHHHHHHHHT--TCCEEEEECCEEET----------------CCHHHHH----HHHH
T ss_pred EEECCCEEEEECCHH----HHHHHHHHHCCCCC--CCCEEEEEECCCCC----------------CCHHHHH----HHHH
T ss_conf 991897999974633----32012332001236--85158875024688----------------5204455----7874
Q ss_pred CCEEEEEECCHHHHHHCCCCHHHHHHHHHH-HC--CCEEEEE
Q ss_conf 166999983758875269741789999887-54--7528999
Q T0641 161 SARIFFTVGSLDYLKMGGRIGKVATAATGK-LG--VKPVIIM 199 (296)
Q Consensus 161 ~~~~~f~v~~L~~L~kgGRis~~~~~ig~l-L~--IkPIl~~ 199 (296)
++...+++++ .-..||--+.+.+.+..- ++ ..|+..+
T Consensus 66 kt~~vv~veE--~~~~gg~g~~v~~~l~e~~~~~~~~~i~~~ 105 (137)
T d1umdb2 66 KTGRVVLVSD--APRHASFVSEVAATIAEDLLDMLLAPPIRV 105 (137)
T ss_dssp HHSCEEEEEE--EESTTCHHHHHHHHHHHHHGGGCSSCCEEE
T ss_pred CCCCEEEEEC--CCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 3485999971--664320477999999986055059980897
No 15
>d1pdoa_ c.54.1.1 (A:) IIA domain of mannose transporter, IIA-Man {Escherichia coli [TaxId: 562]}
Probab=32.23 E-value=15 Score=14.74 Aligned_cols=79 Identities=14% Similarity=0.145 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHHCC---CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9899999999998658---9499997145543578999999999997478980899826566799999999999999748
Q T0641 69 SVESYADVFRSFVEQG---FPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDG 145 (296)
Q Consensus 69 s~~~~~~~~~~~~~~g---~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G 145 (296)
+++++.+.+++..++. +.|++++ .-++||..|.. .+ +..++ .+++||---+.. ++++|.....++
T Consensus 40 ~~~~~~~~~~~~i~~~~~~~~vlilt--Dl~GGsp~n~~--~~-~~~~~--~~v~visG~Nlp-----mllea~~~~~~~ 107 (129)
T d1pdoa_ 40 NAETLIEKYNAQLAKLDTTKGVLFLV--DTWGGSPFNAA--SR-IVVDK--EHYEVIAGVNIP-----MLVETLMARDDD 107 (129)
T ss_dssp CHHHHHHHHHHHHTTSCCTTCEEEEE--SSTTSHHHHHH--HH-HHTTC--TTEEEEESCCHH-----HHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEE--ECCCCCHHHHH--HH-HHCCC--CCEEEEECCCHH-----HHHHHHHHHHCC
T ss_conf 99999999999998357899789998--05654316999--99-96249--998999738899-----999999861049
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 99999999999887
Q T0641 146 LSFEQAMSKLDALM 159 (296)
Q Consensus 146 ~s~~ei~~~l~~~~ 159 (296)
.+++|+.+.+.+.-
T Consensus 108 ~~~~el~~~~~~~g 121 (129)
T d1pdoa_ 108 PSFDELVALAVETG 121 (129)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
T ss_conf 99999999999999
No 16
>d1w85b2 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.62 E-value=16 Score=14.57 Aligned_cols=91 Identities=13% Similarity=0.220 Sum_probs=52.5
Q ss_pred HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 86589499997145543578999999999997478980899826566799999999999999748999999999998874
Q T0641 81 VEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDALMA 160 (296)
Q Consensus 81 ~~~g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~~~~ 160 (296)
..+|.++..++.+.. ...|..|++.+.++ +.++.|||-+++.. .+.+.+.+. ..
T Consensus 6 ~~~G~dvtIis~G~~----~~~al~Aa~~L~~~--gi~~~vid~~~lkP----------------lD~~~i~~~----~~ 59 (132)
T d1w85b2 6 KREGKDITIIAYGAM----VHESLKAAAELEKE--GISAEVVDLRTVQP----------------LDIETIIGS----VE 59 (132)
T ss_dssp EECCSSEEEEECTTH----HHHHHHHHHHHHHT--TCCEEEEECSEEES----------------CCHHHHHHH----HH
T ss_pred EEECCCEEEEECHHH----HHHHHHHHHHHHHC--CCCEEEEEEECCCC----------------CCHHHHHHH----HH
T ss_conf 980898999978189----99999999999962--98727886412688----------------414566689----86
Q ss_pred CCEEEEEECCHHHHHHCCCCHHHHHHHHHH--HCC-CEEEEE
Q ss_conf 166999983758875269741789999887--547-528999
Q T0641 161 SARIFFTVGSLDYLKMGGRIGKVATAATGK--LGV-KPVIIM 199 (296)
Q Consensus 161 ~~~~~f~v~~L~~L~kgGRis~~~~~ig~l--L~I-kPIl~~ 199 (296)
+++..+++++ .-..||=-+.+...+..- .+. .|+.++
T Consensus 60 kt~~vivveE--~~~~gG~gs~i~~~l~~~~~~~l~~~v~~i 99 (132)
T d1w85b2 60 KTGRAIVVQE--AQRQAGIAANVVAEINERAILSLEAPVLRV 99 (132)
T ss_dssp HHSCEEEEEE--EETTSSSHHHHHHHHHHHHGGGCSSCCEEE
T ss_pred CCCCEEEEEC--CCCCCCHHHHHHHHHHHHCHHCCCCCEEEE
T ss_conf 0487068750--552034799999999984433059982896
No 17
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.82 E-value=17 Score=14.25 Aligned_cols=28 Identities=14% Similarity=0.115 Sum_probs=14.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCC-EEEEEEC
Q ss_conf 368989999999999865894-9999714
Q T0641 66 SLPSVESYADVFRSFVEQGFP-VVCFTIT 93 (296)
Q Consensus 66 S~ps~~~~~~~~~~~~~~g~~-vi~i~iS 93 (296)
+-.+.+++.+.|..+...+++ ...+|++
T Consensus 11 ~eit~eeY~~FYk~l~~~~~~Pl~~iH~~ 39 (256)
T d1usua_ 11 SDITQEEYNAFYKSISNDWEDPLYVKHFS 39 (256)
T ss_dssp GGCCHHHHHHHHHHHHCCSSCCSEEEEEE
T ss_pred HHCCHHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 24999999999986247755872268753
No 18
>d1t9ka_ c.124.1.5 (A:) Probable methylthioribose-1-phosphate isomerase TM0911 {Thermotoga maritima [TaxId: 2336]}
Probab=26.10 E-value=19 Score=14.06 Aligned_cols=37 Identities=8% Similarity=0.190 Sum_probs=21.0
Q ss_pred EEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 9826566799999999999999748999999999998
Q T0641 121 VIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDA 157 (296)
Q Consensus 121 ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~ 157 (296)
...||-.+..+.+.+.+....+.++.+.++..+.+..
T Consensus 82 L~saRPTAVNL~wAv~r~~~~l~~~~~~e~~~~~l~~ 118 (340)
T d1t9ka_ 82 LARTRPTAVNLFWALNRMEKVFFENADRENLFEILEN 118 (340)
T ss_dssp HHTSCSSCTHHHHHHHHHHHHHHTTTTCTTHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 8746744557999999998865313444779999999
No 19
>d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]}
Probab=26.05 E-value=13 Score=15.14 Aligned_cols=68 Identities=13% Similarity=0.077 Sum_probs=27.7
Q ss_pred ECCCCCCCHHHHHHCCCEEEEEEEEECCEEEECCCCCCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCC
Q ss_conf 5057899989998649879899999889478607876898999999983578862323689899999999998658
Q T0641 9 SDSACDLSKEYLEKHDVTIVPLSVSFDGETYYRDGVDITRDECYQRMVDDPKLFPKTSLPSVESYADVFRSFVEQG 84 (296)
Q Consensus 9 tDSt~dl~~~~~~~~~I~vvPl~I~~~g~~~y~D~~di~~e~~y~~l~~~~~~~pkTS~ps~~~~~~~~~~~~~~g 84 (296)
-||.+-+-..+++++++.+....+.-|+.. ++ .+..++..++.+...+|.-.|++...-+.+-+.+.|
T Consensus 25 ~dsN~~~l~~~l~~~G~~v~~~~~v~Dd~~------~i--~~~l~~~~~~~DivittGG~s~g~~D~~~~~l~~~G 92 (149)
T d2nqra3 25 YDTNRLAVHLMLEQLGCEVINLGIIRDDPH------AL--RAAFIEADSQADVVISSGGVSVGEADYTKTILEELG 92 (149)
T ss_dssp ECCHHHHHHHHHHHTTCEEEEEEEECSSHH------HH--HHHHHHHHHHCSEEEECSSSCSSSCSHHHHHHHHHS
T ss_pred EECCHHHHHHHHHHCCEEEEECCCCCCHHH------HH--HHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCC
T ss_conf 626468888645332259999141087499------99--999874034558899807866781488999999759
No 20
>d1r71a_ a.4.14.1 (A:) Transcriptional repressor protein KorB DNA-binding domain {Escherichia coli [TaxId: 562]} SCOP: d1r71b_ d1r71d_ d1r71c_
Probab=25.90 E-value=17 Score=14.34 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=33.4
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHH----HCCEEEEEECCHHHHHHCCCCHHHHH
Q ss_conf 9999999974899999999999887----41669999837588752697417899
Q T0641 135 IDQFVRMLEDGLSFEQAMSKLDALM----ASARIFFTVGSLDYLKMGGRIGKVAT 185 (296)
Q Consensus 135 v~~a~~l~~~G~s~~ei~~~l~~~~----~~~~~~f~v~~L~~L~kgGRis~~~~ 185 (296)
+....+|++.|++.++|.+.+..-+ ......=.|+.+..+...|+|+...+
T Consensus 20 A~a~~rl~~~g~t~~eiA~~lGks~s~Vs~~l~Ll~lp~~i~~~l~~g~i~~~~a 74 (114)
T d1r71a_ 20 ADFIGRELAKGKKKGDIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTV 74 (114)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHGGGSCCHHHHHHHHTTSCCCHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
T ss_conf 9999999884168889999984138999999988468888899987589887999
No 21
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=25.82 E-value=19 Score=14.02 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=12.2
Q ss_pred CCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 7417899998875475289998
Q T0641 179 RIGKVATAATGKLGVKPVIIMK 200 (296)
Q Consensus 179 Ris~~~~~ig~lL~IkPIl~~~ 200 (296)
.++..+..+...|++++...++
T Consensus 86 ~~P~~a~~v~~~Lgl~~~~~~d 107 (174)
T d1hnja1 86 AFPSAACQIQSMLGIKGCPAFD 107 (174)
T ss_dssp SSSCHHHHHHHHHTCCSSCEEE
T ss_pred CCCCHHHHHHHCCCCCCHHHHH
T ss_conf 2021012334226997110222
No 22
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.77 E-value=19 Score=14.02 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=55.1
Q ss_pred ECCCCHHHHHH-----HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 23689899999-----9999986589499997145543578999999999997478980899826566799999999999
Q T0641 65 TSLPSVESYAD-----VFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFV 139 (296)
Q Consensus 65 TS~ps~~~~~~-----~~~~~~~~g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~ 139 (296)
-+.....++.. ..+.+...|-+++++++...-..+.+....+.+.+.+..+..+-.+|-++....=.|.++....
T Consensus 52 v~L~~~~E~~~~~~~~~~~~~~~~gi~~~~~p~~D~~~p~~~~~~~~~~~i~~~l~~~~~V~VHC~~G~gRtg~v~~~~L 131 (176)
T d1fpza_ 52 FVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLL 131 (176)
T ss_dssp EECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred EEECCHHHHHHCCCCCHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH
T ss_conf 99088666333178757999997699799689657772056999999999999997699089994678786089999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHH
Q ss_conf 999748999999999998874
Q T0641 140 RMLEDGLSFEQAMSKLDALMA 160 (296)
Q Consensus 140 ~l~~~G~s~~ei~~~l~~~~~ 160 (296)
-....|.+.++..+.+...|.
T Consensus 132 i~~~~~~~~~~Ai~~vr~~R~ 152 (176)
T d1fpza_ 132 LYLSDTISPEQAIDSLRDLRG 152 (176)
T ss_dssp HHHCSSCCHHHHHHHHHHHHC
T ss_pred HHHHCCCCHHHHHHHHHHHCC
T ss_conf 997438999999999998589
No 23
>d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.88 E-value=20 Score=13.91 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=41.8
Q ss_pred ECCCCCCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHC----CC--C-EEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 60787689899999998357886232368989999999999865----89--4-99997145543578999999999997
Q T0641 40 YRDGVDITRDECYQRMVDDPKLFPKTSLPSVESYADVFRSFVEQ----GF--P-VVCFTITTLFSGSYNSAINAKSLVLE 112 (296)
Q Consensus 40 y~D~~di~~e~~y~~l~~~~~~~pkTS~ps~~~~~~~~~~~~~~----g~--~-vi~i~iSs~lSgty~~a~~a~~~~~~ 112 (296)
+.+..+.+.+.+.++.--.....+.....+.....++.++++++ -+ + +|+.+-+. --....+|...+..+.
T Consensus 32 l~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~ma~~Aa~~al~~ag~~~~dIdllI~~t~t~-~~~~p~~A~~v~~~lg- 109 (184)
T d1u6ea1 32 ICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTH-FLQTPPAAPMVAASLG- 109 (184)
T ss_dssp HTTSSSCCHHHHHHHHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCC-CCSSSCHHHHHHHHHT-
T ss_pred HHHHHCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC-CCCCCCHHHHHHHCCC-
T ss_conf 99885989899986029447741345885137999999999886026743341899863267-6544216666430124-
Q ss_pred HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 4789808998265667999999999999997489
Q T0641 113 DYPDANICVIDSKQNTVTQALLIDQFVRMLEDGL 146 (296)
Q Consensus 113 ~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~ 146 (296)
..+..++|-...|.+.-.-+..|..+++.|.
T Consensus 110 ---~~~~~~~di~~~C~g~~~al~~A~~~i~s~~ 140 (184)
T d1u6ea1 110 ---AKGILGFDLSAGAAGFGYALGAAADMIRGGG 140 (184)
T ss_dssp ---CTTSEEEEEECGGGHHHHHHHHHHHHHHHTS
T ss_pred ---CCCCCCCEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf ---5742201000013449999998640764499
No 24
>d1l5ja2 c.8.2.1 (A:161-372) Aconitase B, second N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.70 E-value=20 Score=13.89 Aligned_cols=30 Identities=17% Similarity=0.269 Sum_probs=20.6
Q ss_pred HHHHHHHHHCCCCEEEE-----EECCCCCHHHHHH
Q ss_conf 99999998658949999-----7145543578999
Q T0641 74 ADVFRSFVEQGFPVVCF-----TITTLFSGSYNSA 103 (296)
Q Consensus 74 ~~~~~~~~~~g~~vi~i-----~iSs~lSgty~~a 103 (296)
.+..+.+.++|..+.+. +=||+.||+.|-.
T Consensus 60 ~~~i~~lk~kG~~l~~vgdvvGtGSSRkSa~Nsvl 94 (212)
T d1l5ja2 60 IKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVL 94 (212)
T ss_dssp HHHHHHHHTTSSCEEEEEEEEEESCCCTHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCEEECCCCCHHHHHHHH
T ss_conf 99999998469953885140543742222332225
No 25
>d1t5oa_ c.124.1.5 (A:) Putative eIF-2B delta-subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=24.14 E-value=20 Score=13.82 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=24.3
Q ss_pred EEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 98265667999999999999997489999999999988741
Q T0641 121 VIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDALMAS 161 (296)
Q Consensus 121 ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~~~~~ 161 (296)
...||-.+..+.+.+.+..+.+.++.+.+++.+.+.+..+.
T Consensus 83 L~~aRPTAVnL~nAl~r~~~~~~~~~s~~~~k~~ll~~a~~ 123 (340)
T d1t5oa_ 83 LASTRPTAVNLFVGIERALNAALKGESVEEVKELALREAEK 123 (340)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 98537420357999998765322012267788999999999
No 26
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.62 E-value=21 Score=13.76 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=17.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCH
Q ss_conf 949999714554357899999999999747898089982656
Q T0641 85 FPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQ 126 (296)
Q Consensus 85 ~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~ 126 (296)
|||++| .+|+||..-++.+|. .+.+|.|+|.+.
T Consensus 6 yDviVi--GaG~~Gl~~A~~La~-------~G~~V~vlE~~~ 38 (297)
T d2bcgg1 6 YDVIVL--GTGITECILSGLLSV-------DGKKVLHIDKQD 38 (297)
T ss_dssp CSEEEE--CCSHHHHHHHHHHHH-------TTCCEEEECSSS
T ss_pred CCEEEE--CCCHHHHHHHHHHHH-------CCCCEEEECCCC
T ss_conf 788998--969899999999998-------899899994899
No 27
>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=23.18 E-value=21 Score=13.70 Aligned_cols=80 Identities=10% Similarity=0.089 Sum_probs=47.2
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH-HHHHHHHHHHHHHC--CCCEE---------------------
Q ss_conf 3236898999999999986589499997145543578-99999999999747--89808---------------------
Q T0641 64 KTSLPSVESYADVFRSFVEQGFPVVCFTITTLFSGSY-NSAINAKSLVLEDY--PDANI--------------------- 119 (296)
Q Consensus 64 kTS~ps~~~~~~~~~~~~~~g~~vi~i~iSs~lSgty-~~a~~a~~~~~~~~--~~~~i--------------------- 119 (296)
..+.|-++ ..+.+.++.++|+.|+.+| +.++.+ +... + .+..+ |-..+
T Consensus 18 ~~~kPi~~-~Ie~l~~L~~~G~~IIi~T---aR~~~~~~~t~---~-wL~~~~i~yd~i~~~~~~~~~~~~~~~~Kp~ad 89 (122)
T d2obba1 18 RIGEEIPF-AVETLKLLQQEKHRLILWS---VREGELLDEAI---E-WCRARGLEFYAANKDYPEEERDHQGFSRKLKAD 89 (122)
T ss_dssp SCCCBCTT-HHHHHHHHHHTTCEEEECC---SCCHHHHHHHH---H-HHHTTTCCCSEESSSSTTC---CCSCCSSCCCS
T ss_pred CCCCCCHH-HHHHHHHHHHCCCEEEEEE---CCCCCCHHHHH---H-HHHHCCCCCEEHHCCCCCCCCCCCEECCCCCCC
T ss_conf 63664599-9999999998799699993---58886538899---9-999819983450105766866442132784414
Q ss_pred EEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 9982656679999999999999974899999999
Q T0641 120 CVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMS 153 (296)
Q Consensus 120 ~ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~ 153 (296)
..||-|++..-..+- .+.+++++.+|++++.+
T Consensus 90 ~yIDDKai~~~~~w~--~~~~~i~~~~~~~d~~~ 121 (122)
T d2obba1 90 LFIDDRNVGGIPDWG--IIYEMIKEKKTFADIYS 121 (122)
T ss_dssp EEECTTSTTCCCCHH--HHHHHHHHTCCHHHHHC
T ss_pred EEEECCCCCCCCCHH--HHHHHHHCCCCHHHHHC
T ss_conf 898578556778889--99999971664756642
No 28
>d2jera1 d.126.1.6 (A:2-365) Agmatine iminohydrolase {Enterococcus faecalis [TaxId: 1351]}
Probab=22.00 E-value=22 Score=13.55 Aligned_cols=36 Identities=14% Similarity=-0.064 Sum_probs=17.1
Q ss_pred HHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCEEEEE
Q ss_conf 99999998738622226898626556753054509999
Q T0641 251 EFMKEVESTLDVKLDSETNVAIGIVSAVHTGPYPIGLG 288 (296)
Q Consensus 251 ~~~~~l~~~~~~~~~~~~~~~i~~vi~~H~Gpg~igi~ 288 (296)
+.++.+++.||.+ ++.-....+++.-+.|-.|+...
T Consensus 325 ~Al~~l~~~fP~r--~Vv~I~~~~i~~~gG~iHCiT~q 360 (364)
T d2jera1 325 LALEQVQTMFPDK--KIVGVNTVEVVYGGGNIHXITQQ 360 (364)
T ss_dssp HHHHHHHHHSTTS--EEEEEECHHHHTTTCCTGGGCEE
T ss_pred HHHHHHHHHCCCC--EEEEEECHHHHHCCCCCCHHHHC
T ss_conf 9999999888899--79997108987569801446312
No 29
>d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli [TaxId: 562]}
Probab=21.53 E-value=23 Score=13.49 Aligned_cols=11 Identities=9% Similarity=0.241 Sum_probs=4.5
Q ss_pred CCHHHHHHHHH
Q ss_conf 89899999999
Q T0641 68 PSVESYADVFR 78 (296)
Q Consensus 68 ps~~~~~~~~~ 78 (296)
-+.+++...+.
T Consensus 8 ~~~~~~~~~l~ 18 (117)
T d2fwha1 8 KTVDELNQALV 18 (117)
T ss_dssp CSHHHHHHHHH
T ss_pred CCHHHHHHHHH
T ss_conf 68999999999
No 30
>d1r71a_ a.4.14.1 (A:) Transcriptional repressor protein KorB DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=21.47 E-value=9.7 Score=15.94 Aligned_cols=51 Identities=16% Similarity=0.092 Sum_probs=33.0
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHH----CCEEEEEECCHHHHHHCCCCHHHHH
Q ss_conf 99999999748999999999998874----1669999837588752697417899
Q T0641 135 IDQFVRMLEDGLSFEQAMSKLDALMA----SARIFFTVGSLDYLKMGGRIGKVAT 185 (296)
Q Consensus 135 v~~a~~l~~~G~s~~ei~~~l~~~~~----~~~~~f~v~~L~~L~kgGRis~~~~ 185 (296)
+....+|.+.|.|.++|.+.+..... .....=.|+.+..+...|.++...+
T Consensus 20 A~a~~~l~~~g~s~~eiA~~~G~s~~~V~~~l~L~~lp~~v~~~~~~g~i~~~~a 74 (114)
T d1r71a_ 20 ADFIGRELAKGKKKGDIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTV 74 (114)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHGGGSCCHHHHHHHHTTSCCCHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
T ss_conf 9999999880998999999977729999999999679999999999499878999
No 31
>d2ozlb2 c.48.1.2 (B:192-329) E1-beta subunit of pyruvate dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.41 E-value=23 Score=13.47 Aligned_cols=91 Identities=12% Similarity=0.104 Sum_probs=51.4
Q ss_pred HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 86589499997145543578999999999997478980899826566799999999999999748999999999998874
Q T0641 81 VEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDALMA 160 (296)
Q Consensus 81 ~~~g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~~~~ 160 (296)
..+|.++..++.++.+ ..|..|++.+.+ .+..+.|||-+++.. .+.+.+. +...
T Consensus 10 ~~~G~ditiis~G~~~----~~al~aa~~L~~--~gi~~~vid~~~lkP----------------ld~~~i~----~~~~ 63 (138)
T d2ozlb2 10 ERQGTHITVVSHSRPV----GHCLEAAAVLSK--EGVECEVINMRTIRP----------------MDMETIE----ASVM 63 (138)
T ss_dssp EECCSSEEEEECSTHH----HHHHHHHHHHHT--TTCCEEEEECCEEET----------------CCHHHHH----HHHH
T ss_pred EEECCCEEEEECCHHH----HHHHHHHHHHCC--CCCCEEEEEECCCCC----------------CCCHHHH----HHHC
T ss_conf 9948989999746788----857887542001--571338987403468----------------7403242----2322
Q ss_pred CCEEEEEECCHHHHHHCCCCHHHHHHHHH--HHC--CCEEEEE
Q ss_conf 16699998375887526974178999988--754--7528999
Q T0641 161 SARIFFTVGSLDYLKMGGRIGKVATAATG--KLG--VKPVIIM 199 (296)
Q Consensus 161 ~~~~~f~v~~L~~L~kgGRis~~~~~ig~--lL~--IkPIl~~ 199 (296)
++...+++++=. ..||==+-..+.+.. .+. =.|+.++
T Consensus 64 k~~~iivvee~~--~~gG~gs~i~~~l~e~~~~~~l~~~v~ri 104 (138)
T d2ozlb2 64 KTNHLVTVEGGW--PQFGVGAEICARIMEGPAFNFLDAPAVRV 104 (138)
T ss_dssp HHSCEEEECSSC--STTCHHHHHHHHHHHSTTGGGCSSCCEEE
T ss_pred CCCCEEEEECCC--CCCHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 555127861464--21118899999987623344136860897
No 32
>d1pdoa_ c.54.1.1 (A:) IIA domain of mannose transporter, IIA-Man {Escherichia coli [TaxId: 562]}
Probab=20.08 E-value=24 Score=13.29 Aligned_cols=80 Identities=14% Similarity=0.150 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHHHHC---CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 989999999999865---89499997145543578999999999997478980899826566799999999999999748
Q T0641 69 SVESYADVFRSFVEQ---GFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDG 145 (296)
Q Consensus 69 s~~~~~~~~~~~~~~---g~~vi~i~iSs~lSgty~~a~~a~~~~~~~~~~~~i~ViDS~~~s~~~g~lv~~a~~l~~~G 145 (296)
+++++.+.+++..++ ++.+++++ .=++||-.|+. ++ +..++ .+++|+---+..+ ++++......+
T Consensus 40 ~~~~~~~~i~~~i~~~~~~~gvlilt--Dl~Ggtp~n~a--~~-~~~~~--~~v~visGvNlpm-----lle~~~~~~~~ 107 (129)
T d1pdoa_ 40 NAETLIEKYNAQLAKLDTTKGVLFLV--DTWGGSPFNAA--SR-IVVDK--EHYEVIAGVNIPM-----LVETLMARDDD 107 (129)
T ss_dssp CHHHHHHHHHHHHTTSCCTTCEEEEE--SSTTSHHHHHH--HH-HHTTC--TTEEEEESCCHHH-----HHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEE--ECCCCCHHHHH--HH-HHHCC--CCEEEEECCCHHH-----HHHHHHHHCCC
T ss_conf 98999999999998547999889896--42122259999--99-98579--9869983499899-----99999843259
Q ss_pred CCHHHHHHHHHHHHH
Q ss_conf 999999999998874
Q T0641 146 LSFEQAMSKLDALMA 160 (296)
Q Consensus 146 ~s~~ei~~~l~~~~~ 160 (296)
.+++|+.+.+.+.-.
T Consensus 108 ~~~~el~~~~~~~g~ 122 (129)
T d1pdoa_ 108 PSFDELVALAVETGR 122 (129)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 998899999999867
Done!