set ribbon_radius = 0.5 set orthoscopic = 1 cmd.read_pdbstr("""\ ATOM 60 N ILE 226 -8.545 0.026 4.182 1.00 0.00\ ATOM 61 CA ILE 226 -8.693 -0.454 5.526 1.00 0.00\ ATOM 62 C ILE 226 -9.457 0.564 6.325 1.00 0.00\ ATOM 63 O ILE 226 -10.366 0.167 7.045 1.00 0.00\ ATOM 64 CB ILE 226 -7.344 -0.798 6.140 1.00 0.00\ ATOM 65 CG1 ILE 226 -6.889 -2.211 5.729 1.00 0.00\ ATOM 66 CG2 ILE 226 -7.285 -0.612 7.673 1.00 0.00\ ATOM 67 CD1 ILE 226 -5.364 -2.342 5.686 1.00 0.00\ ATOM 68 N SER 227 -9.120 1.875 6.246 1.00 0.00\ ATOM 69 CA SER 227 -9.887 2.913 6.872 1.00 0.00\ ATOM 70 C SER 227 -11.365 2.876 6.585 1.00 0.00\ ATOM 71 O SER 227 -12.151 3.097 7.502 1.00 0.00\ ATOM 72 CB SER 227 -9.331 4.309 6.576 1.00 0.00\ ATOM 73 OG SER 227 -7.911 4.254 6.619 1.00 0.00\ ATOM 74 N THR 228 -11.799 2.599 5.337 1.00 0.00\ ATOM 75 CA THR 228 -13.199 2.432 5.048 1.00 0.00\ ATOM 76 C THR 228 -13.786 1.248 5.785 1.00 0.00\ ATOM 77 O THR 228 -14.947 1.285 6.191 1.00 0.00\ ATOM 78 CB THR 228 -13.440 2.348 3.562 1.00 0.00\ ATOM 79 OG1 THR 228 -13.057 3.586 2.976 1.00 0.00\ ATOM 80 CG2 THR 228 -14.921 2.049 3.245 1.00 0.00\ ATOM 81 N SER 229 -13.000 0.193 6.041 1.00 0.00\ ATOM 82 CA SER 229 -13.530 -0.935 6.751 1.00 0.00\ ATOM 83 C SER 229 -13.639 -0.579 8.218 1.00 0.00\ ATOM 84 O SER 229 -14.333 -1.264 8.961 1.00 0.00\ ATOM 85 CB SER 229 -12.664 -2.196 6.603 1.00 0.00\ ATOM 86 OG SER 229 -12.476 -2.487 5.224 1.00 0.00\ ATOM 87 N ILE 230 -13.003 0.523 8.665 1.00 0.00\ ATOM 88 CA ILE 230 -12.770 0.765 10.060 1.00 0.00\ ATOM 89 C ILE 230 -13.973 1.574 10.447 1.00 0.00\ ATOM 90 O ILE 230 -14.653 1.227 11.405 1.00 0.00\ ATOM 91 CB ILE 230 -11.464 1.469 10.379 1.00 0.00\ ATOM 92 CG1 ILE 230 -10.331 0.431 10.515 1.00 0.00\ ATOM 93 CG2 ILE 230 -11.608 2.373 11.626 1.00 0.00\ ATOM 94 CD1 ILE 230 -8.937 1.065 10.564 1.00 0.00\ ATOM 95 N THR 231 -14.296 2.648 9.688 1.00 0.00\ ATOM 96 CA THR 231 -15.608 3.241 9.627 1.00 0.00\ ATOM 97 C THR 231 -16.750 2.259 9.722 1.00 0.00\ ATOM 98 O THR 231 -17.735 2.551 10.401 1.00 0.00\ ATOM 99 CB THR 231 -15.771 4.055 8.370 1.00 0.00\ ATOM 100 OG1 THR 231 -14.626 4.884 8.213 1.00 0.00\ ATOM 101 CG2 THR 231 -17.043 4.939 8.405 1.00 0.00\ ATOM 102 N ALA 232 -16.662 1.085 9.073 1.00 0.00\ ATOM 103 CA ALA 232 -17.864 0.319 8.876 1.00 0.00\ ATOM 104 C ALA 232 -18.007 -0.401 10.164 1.00 0.00\ ATOM 105 O ALA 232 -19.098 -0.534 10.707 1.00 0.00\ ATOM 106 CB ALA 232 -17.804 -0.739 7.768 1.00 0.00\ ATOM 107 N LEU 233 -16.848 -0.813 10.698 1.00 0.00\ ATOM 108 CA LEU 233 -16.707 -1.470 11.943 1.00 0.00\ ATOM 109 C LEU 233 -17.112 -0.594 13.088 1.00 0.00\ ATOM 110 O LEU 233 -17.277 -1.143 14.165 1.00 0.00\ ATOM 111 CB LEU 233 -15.251 -1.880 12.213 1.00 0.00\ ATOM 112 CG LEU 233 -14.813 -3.205 11.561 1.00 0.00\ ATOM 113 CD1 LEU 233 -13.276 -3.319 11.586 1.00 0.00\ ATOM 114 CD2 LEU 233 -15.526 -4.437 12.154 1.00 0.00\ ATOM 115 N TYR 234 -17.281 0.741 12.931 1.00 0.00\ ATOM 116 CA TYR 234 -17.483 1.627 14.060 1.00 0.00\ ATOM 117 C TYR 234 -18.931 1.948 14.161 1.00 0.00\ ATOM 118 O TYR 234 -19.454 2.124 15.261 1.00 0.00\ ATOM 119 CB TYR 234 -16.712 2.961 13.985 1.00 0.00\ ATOM 120 CG TYR 234 -17.453 4.106 14.640 1.00 0.00\ ATOM 121 CD1 TYR 234 -16.907 4.677 15.767 1.00 0.00\ ATOM 122 CD2 TYR 234 -18.445 4.829 13.991 1.00 0.00\ ATOM 123 CE1 TYR 234 -17.456 5.826 16.277 1.00 0.00\ ATOM 124 CE2 TYR 234 -19.233 5.737 14.668 1.00 0.00\ ATOM 125 CZ TYR 234 -18.655 6.278 15.788 1.00 0.00\ ATOM 126 OH TYR 234 -19.276 7.372 16.416 1.00 0.00\ ATOM 127 N ALA 235 -19.629 1.993 12.999 1.00 0.00\ ATOM 128 CA ALA 235 -21.076 1.962 12.975 1.00 0.00\ ATOM 129 C ALA 235 -21.410 0.721 13.705 1.00 0.00\ ATOM 130 O ALA 235 -22.337 0.676 14.510 1.00 0.00\ ATOM 131 CB ALA 235 -21.693 1.794 11.576 1.00 0.00\ ATOM 132 N ASN 236 -20.545 -0.263 13.469 1.00 0.00\ ATOM 133 CA ASN 236 -20.670 -1.532 14.025 1.00 0.00\ ATOM 134 C ASN 236 -20.375 -1.246 15.519 1.00 0.00\ ATOM 135 O ASN 236 -21.201 -1.366 16.391 1.00 0.00\ ATOM 136 CB ASN 236 -19.811 -2.600 13.282 1.00 0.00\ ATOM 137 CG ASN 236 -20.648 -3.606 12.466 1.00 0.00\ ATOM 138 OD1 ASN 236 -21.539 -3.246 11.696 1.00 0.00\ ATOM 139 ND2 ASN 236 -20.368 -4.929 12.650 1.00 0.00\ ATOM 140 N ASP 237 -19.215 -0.821 15.978 1.00 0.00\ ATOM 141 CA ASP 237 -18.990 -0.736 17.412 1.00 0.00\ ATOM 142 C ASP 237 -20.002 0.038 18.290 1.00 0.00\ ATOM 143 O ASP 237 -20.338 -0.381 19.398 1.00 0.00\ ATOM 144 CB ASP 237 -17.589 -0.199 17.601 1.00 0.00\ ATOM 145 CG ASP 237 -17.103 -0.511 18.979 1.00 0.00\ ATOM 146 OD1 ASP 237 -16.714 -1.685 19.225 1.00 0.00\ ATOM 147 OD2 ASP 237 -17.058 0.453 19.786 1.00 0.00\ ATOM 148 N PHE 238 -20.590 1.141 17.773 1.00 0.00\ ATOM 149 CA PHE 238 -21.774 1.794 18.311 1.00 0.00\ ATOM 150 C PHE 238 -23.111 1.041 18.186 1.00 0.00\ ATOM 151 O PHE 238 -23.194 -0.185 18.162 1.00 0.00\ ATOM 152 CB PHE 238 -21.855 3.212 17.672 1.00 0.00\ ATOM 153 CG PHE 238 -22.722 4.230 18.357 1.00 0.00\ ATOM 154 CD1 PHE 238 -22.409 4.666 19.623 1.00 0.00\ ATOM 155 CD2 PHE 238 -23.808 4.772 17.686 1.00 0.00\ ATOM 156 CE1 PHE 238 -23.151 5.674 20.189 1.00 0.00\ ATOM 157 CE2 PHE 238 -24.709 5.542 18.384 1.00 0.00\ ATOM 158 CZ PHE 238 -24.295 6.086 19.567 1.00 0.00\ ATOM 159 N ARG 239 -24.215 1.824 18.194 1.00 0.00\ ATOM 160 CA ARG 239 -25.566 1.442 18.429 1.00 0.00\ ATOM 161 C ARG 239 -26.142 1.198 17.095 1.00 0.00\ ATOM 162 O ARG 239 -27.099 0.454 17.022 1.00 0.00\ ATOM 163 CB ARG 239 -26.461 2.541 19.052 1.00 0.00\ ATOM 164 CG ARG 239 -26.385 2.633 20.576 1.00 0.00\ ATOM 165 CD ARG 239 -26.876 3.987 21.114 1.00 0.00\ ATOM 166 NE ARG 239 -26.699 4.004 22.597 1.00 0.00\ ATOM 167 CZ ARG 239 -26.573 5.174 23.322 1.00 0.00\ ATOM 168 NH1 ARG 239 -26.488 5.059 24.707 1.00 0.00\ ATOM 169 NH2 ARG 239 -26.727 6.404 22.741 1.00 0.00\ ATOM 170 N ALA 240 -25.622 1.821 16.013 1.00 0.00\ ATOM 171 CA ALA 240 -25.904 1.352 14.683 1.00 0.00\ ATOM 172 C ALA 240 -25.671 -0.112 14.432 1.00 0.00\ ATOM 173 O ALA 240 -26.324 -0.670 13.560 1.00 0.00\ ATOM 174 CB ALA 240 -25.187 2.133 13.569 1.00 0.00\ ATOM 175 N ASN 241 -24.729 -0.781 15.118 1.00 0.00\ ATOM 176 CA ASN 241 -24.507 -2.170 14.819 1.00 0.00\ ATOM 177 C ASN 241 -25.507 -3.111 15.231 1.00 0.00\ ATOM 178 O ASN 241 -26.000 -3.873 14.409 1.00 0.00\ ATOM 179 CB ASN 241 -23.376 -2.684 15.641 1.00 0.00\ ATOM 180 CG ASN 241 -22.541 -3.804 15.050 1.00 0.00\ ATOM 181 OD1 ASN 241 -22.937 -4.250 13.983 1.00 0.00\ ATOM 182 ND2 ASN 241 -21.374 -4.203 15.654 1.00 0.00\ ATOM 183 N CYS 242 -25.703 -3.138 16.554 1.00 0.00\ ATOM 184 CA CYS 242 -26.448 -4.138 17.206 1.00 0.00\ ATOM 185 C CYS 242 -27.586 -3.354 17.743 1.00 0.00\ ATOM 186 O CYS 242 -28.137 -3.717 18.778 1.00 0.00\ ATOM 187 CB CYS 242 -25.684 -4.762 18.395 1.00 0.00\ ATOM 188 SG CYS 242 -24.187 -5.686 17.902 1.00 0.00\ ATOM 189 N GLU 243 -27.900 -2.216 17.071 1.00 0.00\ ATOM 190 CA GLU 243 -29.194 -1.668 16.811 1.00 0.00\ ATOM 191 C GLU 243 -30.229 -2.700 17.006 1.00 0.00\ ATOM 192 O GLU 243 -30.840 -2.748 18.072 1.00 0.00\ ATOM 193 CB GLU 243 -29.351 -0.973 15.425 1.00 0.00\ ATOM 194 CG GLU 243 -30.217 0.285 15.505 1.00 0.00\ ATOM 195 CD GLU 243 -30.287 0.937 14.131 1.00 0.00\ ATOM 196 OE1 GLU 243 -29.338 0.769 13.322 1.00 0.00\ ATOM 197 OE2 GLU 243 -31.304 1.637 13.877 1.00 0.00\ ""","T0642TS117_3_2") cmd.as("cartoon") cmd.select("rainbow","T0642TS117_3_2") cmd.spectrum(expression="count", selection="rainbow") cmd.as("cartoon","rainbow") cmd.zoom("rainbow",animate=-1) cmd.delete("rainbow")