hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 113474267.fa
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Query sequence: gi|113474267|ref|YP_720328.1|
Accession: [none]
Description: cadherin [Trichodesmium erythraeum IMS101]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
HemolysinCabind Hemolysin-type calcium-binding repeat 143.7 2.1e-42 8
SBBP Beta-propeller repeat 122.5 4.6e-35 7
Cadherin Cadherin domain 20.0 5.1e-05 1
TAT_ubiq Aminotransferase ubiquitination site 16.6 0.0001 3
Fil_haemagg Haemagluttinin repeat 15.9 0.00075 2
FAINT Domain of unknown function, DUF529 8.5 0.069 1
Reg_prop Two component regulator propeller 8.8 0.73 5
PhnA PhnA protein 6.3 1 4
Acetate_kinase Acetokinase family 1.8 1.3 1
Neugrin Neugrin 2.1 1.3 1
PQQ PQQ enzyme repeat 5.0 1.3 2
He_PIG Putative Ig domain 4.3 2 1
DUF2391 Putative integral membrane protein (D 1.6 2.1 1
MCD Malonyl-CoA decarboxylase (MCD) 0.3 2.2 1
Peptidase_M66 Peptidase M66 1.4 2.4 1
Glyco_hydro_14 Glycosyl hydrolase family 14 1.8 3 1
MOFRL MOFRL family 3.4 3.1 1
BDM Putative biofilm-dependent modulation 2.1 4 1
ENOD40 ENOD40 protein 5.2 4.1 2
Ribosomal_S8 Ribosomal protein S8 1.2 4.2 1
OprB Carbohydrate-selective porin, OprB fa 0.7 4.6 1
Y_Y_Y Y_Y_Y domain 2.6 4.6 1
Invasin_D3 Invasin, domain 3 1.7 5.8 1
adh_short short chain dehydrogenase 1.5 6.1 1
DUF2581 Protein of unknown function (DUF2581) 1.7 6.1 1
Thaumatin Thaumatin family -1.8 6.6 1
DUF1314 Protein of unknown function (DUF1314) 0.5 7.1 1
DUF1858 Domain of unknown function (DUF1858) 2.2 7.7 1
Fimbrial_K88 Fimbrial, major and minor subunit 0.5 7.9 1
Phage_tail_S Phage virion morphogenesis family 0.9 8.1 1
DUF796 Protein of unknown function (DUF796) 1.4 8.4 1
KR KR domain 0.5 9.3 1
Ribosomal_S5_C Ribosomal protein S5, C-terminal doma 1.9 9.4 1
Vert_HS_TF Vertebrate heat shock transcription f -0.7 9.8 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Vert_HS_TF 1/1 11 24 .. 202 215 .. -0.7 9.8
BDM 1/1 18 33 .. 77 92 .] 2.1 4
MOFRL 1/1 27 41 .. 42 60 .. 3.4 3.1
Phage_tail_S 1/1 33 53 .. 134 154 .] 0.9 8.1
DUF1858 1/1 41 54 .. 1 17 [. 2.2 7.7
DUF1314 1/1 52 64 .. 177 189 .] 0.5 7.1
DUF2581 1/1 136 149 .. 1 14 [. 1.7 6.1
SBBP 1/7 171 199 .. 1 31 [. 14.8 0.0021
Ribosomal_S8 1/1 173 185 .. 131 143 .] 1.2 4.2
PhnA 1/4 187 199 .. 1 13 [. 1.1 24
DUF796 1/1 188 209 .. 19 38 .. 1.4 8.4
Fil_haemagg 1/2 208 308 .. 1 75 [] 2.5 5.4
SBBP 2/7 238 266 .. 1 31 [. 24.5 3e-06
Reg_prop 1/5 245 268 .. 1 23 [] 1.3 55
PhnA 2/4 254 266 .. 1 13 [. 1.0 27
adh_short 1/1 260 270 .. 1 11 [. 1.5 6.1
KR 1/1 260 270 .. 1 11 [. 0.5 9.3
ENOD40 1/2 303 313 .. 1 12 [] 2.7 18
Ribosomal_S5_C 1/1 305 318 .. 39 52 .. 1.9 9.4
SBBP 3/7 305 342 .. 1 39 [] 17.5 0.00033
OprB 1/1 311 343 .. 443 468 .] 0.7 4.6
Reg_prop 2/5 313 338 .. 1 23 [] 0.0 1.2e+02
PhnA 3/4 323 335 .. 1 13 [. 0.3 40
Glyco_hydro_14 1/1 354 366 .. 422 434 .] 1.8 3
PQQ 1/2 355 388 .. 1 37 [] 3.8 3.1
TAT_ubiq 1/3 359 376 .. 1 18 [. 6.4 0.21
ENOD40 2/2 371 381 .. 1 12 [] 2.4 23
SBBP 4/7 373 401 .. 1 31 [. 13.0 0.0069
Peptidase_M66 1/1 379 394 .. 192 207 .. 1.4 2.4
MCD 1/1 412 428 .. 1 22 [. 0.3 2.2
Fil_haemagg 2/2 418 504 .. 1 75 [] 13.4 0.0039
TAT_ubiq 2/3 423 444 .. 1 22 [. 4.2 1.1
Neugrin 1/1 430 440 .. 212 222 .] 2.1 1.3
SBBP 5/7 437 465 .. 1 31 [. 26.5 7.7e-07
Reg_prop 3/5 444 467 .. 1 23 [] 4.1 11
PhnA 4/4 453 465 .. 1 13 [. 3.9 4.5
Thaumatin 1/1 473 490 .. 86 103 .. -1.8 6.6
TAT_ubiq 3/3 487 510 .. 1 24 [. 6.0 0.29
PQQ 2/2 488 516 .. 9 37 .] 1.2 19
SBBP 6/7 501 530 .. 1 32 [. 22.5 1.2e-05
Reg_prop 4/5 508 532 .. 1 23 [] 2.0 37
Invasin_D3 1/1 527 537 .. 68 78 .. 1.7 5.8
FAINT 1/1 534 595 .. 1 116 [] 8.5 0.069
Reg_prop 5/5 548 568 .. 1 20 [. 1.2 59
SBBP 7/7 575 597 .. 16 39 .] 3.7 4
Fimbrial_K88 1/1 592 600 .. 1 9 [. 0.5 7.9
Cadherin 1/1 633 721 .. 1 107 [] 20.0 5.1e-05
He_PIG 1/1 673 709 .. 31 61 .] 4.3 2
Y_Y_Y 1/1 697 721 .. 42 69 .] 2.6 4.6
HemolysinCabind 1/8 725 742 .. 1 18 [] 18.6 0.00018
DUF2391 1/1 730 737 .. 1 8 [. 1.6 2.1
HemolysinCabind 2/8 743 760 .. 1 18 [] 21.9 1.8e-05
HemolysinCabind 3/8 761 778 .. 1 18 [] 14.2 0.0038
HemolysinCabind 4/8 779 796 .. 1 18 [] 20.2 5.8e-05
HemolysinCabind 5/8 797 814 .. 1 18 [] 13.6 0.0058
HemolysinCabind 6/8 815 832 .. 1 18 [] 22.0 1.7e-05
HemolysinCabind 7/8 833 850 .. 1 18 [] 17.7 0.00033
HemolysinCabind 8/8 851 868 .. 1 18 [] 15.4 0.0017
Acetate_kinase 1/1 916 924 .. 389 397 .] 1.8 1.3
Alignments of top-scoring domains:
Vert_HS_TF: domain 1 of 1, from 11 to 24: score -0.7, E = 9.8
*->IDsnLedLQamLSg<-*
ID + e+ Q++L+g
gi|1134742 11 IDASVENYQQLLNG 24
BDM: domain 1 of 1, from 18 to 33: score 2.1, E = 4
*->YqqtinYvvsGqHPtL<-*
Yqq +n v+ G P L
gi|1134742 18 YQQLLNGVIPGVKPFL 33
MOFRL: domain 1 of 1, from 27 to 41: score 3.4, E = 3.1
CS .T-TTE...EEEEEETTS-
*->lgaegisDFlfLsadTDGI<-*
+g++++ +L++dTDGI
gi|1134742 27 PGVKPF----LLGGDTDGI 41
Phage_tail_S: domain 1 of 1, from 33 to 53: score 0.9, E = 8.1
*->lLGltkqDeqmIeeiIlkhls<-*
lLG + ++ q I +i++kh +
gi|1134742 33 LLGGDTDGIQQIGDILQKHPE 53
DUF1858: domain 1 of 1, from 41 to 54: score 2.2, E = 7.7
*->IdkdttvgdLveryPet<-*
I + +gd++ ++Pet
gi|1134742 41 I---QQIGDILQKHPET 54
DUF1314: domain 1 of 1, from 52 to 64: score 0.5, E = 7.1
*->PtvsnsrilakGS<-*
P + + +i+++GS
gi|1134742 52 PETDTLHIISHGS 64
DUF2581: domain 1 of 1, from 136 to 149: score 1.7, E = 6.1
*->skpWeLevrPhftp<-*
+ +WeLevr+ t+
gi|1134742 136 GGNWELEVRTGQTK 149
SBBP: domain 1 of 7, from 171 to 199: score 14.8, E = 0.0021
*->qWstqlGPgpgasifgngIavDsnGNiYvtG<-*
+W++ +G +++ +++++I++Ds GN+ v+G
gi|1134742 171 EWAKHIG--GQGLTYVYRITTDSIGNVLVAG 199
Ribosomal_S8: domain 1 of 1, from 173 to 185: score 1.2, E = 4.2
CS HCT--EEEEEEE-
*->kkgvGGElLcyVw<-*
+k++GG+ L yV+
gi|1134742 173 AKHIGGQGLTYVY 185
PhnA: domain 1 of 4, from 187 to 199: score 1.1, E = 24
*->ivkDsnGnlLadG<-*
i+ Ds Gn+L G
gi|1134742 187 ITTDSIGNVLVAG 199
DUF796: domain 1 of 1, from 188 to 209: score 1.4, E = 8.4
*->T.DSIGesqdag.HeDeIevls<-*
T+DSIG++++ag + D I++ +
gi|1134742 188 TtDSIGNVLVAGvFDDNIDIDG 209
Fil_haemagg: domain 1 of 2, from 208 to 308: score 2.5, E = 5.4
CS EEESSEEEETT TT--EE-SEEEEE
*->vaaGaltlnaa.......................alggldlnnggtl
+ G+++ + ++++++++ + +++++ ++ gg + + t+
gi|1134742 208 DGDGNNDFTSNkdsstrdayvakfdsngnwiwakQIGGRGSEDIKTI 254
CS E-STT-EEEE-S-EEESSE.................. .EEEEESS-E
sagggltltaagllnnggtliaggdlllaagalrngg...dltltaaGdL
++ ++ ag + ++++ g+ + +++ ++++++ ++ l++ G+L
gi|1134742 255 TTDSSGNVLVAGGFGGNIDIDGDGNNDFSSNNDSSNNdafAAKLDSNGNL 304
CS EEEE
dnsg<-*
++
gi|1134742 305 VWAK 308
SBBP: domain 2 of 7, from 238 to 266: score 24.5, E = 3e-06
*->qWstqlGPgpgasifgngIavDsnGNiYvtG<-*
+W++q+G g+g + + I++Ds+GN+ v+G
gi|1134742 238 IWAKQIG-GRGSED-IKTITTDSSGNVLVAG 266
Reg_prop: domain 1 of 5, from 245 to 268: score 1.3, E = 55
*->slpgg.vtfalledsdGrlWigt.n<-*
+ ++++ ++ +ds G+++++++
gi|1134742 245 GRGSEdIK-TITTDSSGNVLVAGgF 268
PhnA: domain 2 of 4, from 254 to 266: score 1.0, E = 27
*->ivkDsnGnlLadG<-*
i+ Ds Gn+L G
gi|1134742 254 ITTDSSGNVLVAG 266
adh_short: domain 1 of 1, from 260 to 270: score 1.5, E = 6.1
CS EEEEECTTSSH
*->GTvLiTGGtGG<-*
G vL+ GG GG
gi|1134742 260 GNVLVAGGFGG 270
KR: domain 1 of 1, from 260 to 270: score 0.5, E = 9.3
*->GtYLvTGGlGG<-*
G +Lv+GG+GG
gi|1134742 260 GNVLVAGGFGG 270
ENOD40: domain 1 of 2, from 303 to 313: score 2.7, E = 18
*->melcWqksiHGs<-*
+l W k i Gs
gi|1134742 303 -NLVWAKQIGGS 313
Ribosomal_S5_C: domain 1 of 1, from 305 to 318: score 1.9, E = 9.4
CS EEEEE-S.--SHHH
*->iltksyGkSrnpiN<-*
+++k++G S++++N
gi|1134742 305 VWAKQIGGSVTTGN 318
SBBP: domain 3 of 7, from 305 to 342: score 17.5, E = 0.00033
*->qWstqlGP..gpgasifgngIavDsnGNiYvtGstngnnfe<-*
+W++q+G++ ++g+ + +gI +Ds+GN+ v+G+ g n++
gi|1134742 305 VWAKQIGGsvTTGN--YISGIITDSSGNALVAGTFKG-NID 342
OprB: domain 1 of 1, from 311 to 343: score 0.7, E = 4.6
*->ggnypnpn.......sdndnalvlGTLrttftF<-*
gg ++++n ++ ++ +nalv+GT++ +++
gi|1134742 311 GGSVTTGNyisgiitDSSGNALVAGTFKGNIDI 343
Reg_prop: domain 2 of 5, from 313 to 338: score 0.0, E = 1.2e+02
*->slpgg.vtfalledsdG.rlWigt.n<-*
s++ g++++ + +ds G+ l +gt +
gi|1134742 313 SVTTGnYISGIITDSSGnALVAGTfK 338
PhnA: domain 3 of 4, from 323 to 335: score 0.3, E = 40
*->ivkDsnGnlLadG<-*
i+ Ds Gn L G
gi|1134742 323 IITDSSGNALVAG 335
Glyco_hydro_14: domain 1 of 1, from 354 to 366: score 1.8, E = 3
CS T....-HHHHHHH
*->nsdGsntselseF<-*
n+dGsn s ++F
gi|1134742 354 NNDGSNDSYVAKF 366
PQQ: domain 1 of 2, from 355 to 388: score 3.8, E = 3.1
CS TEEEEETTTSEEEEEETTTTSEEEEEESSSGGGS GEE
*->gvvyvgtadGylyAlDakTGkvlWkfktggpvds.pvt<-*
++ g+ d y+ +D ++G+++W +++gg +++
gi|1134742 355 ND---GSNDSYVAKFD-SNGNLVWAKRIGGSNGNsSGA 388
TAT_ubiq: domain 1 of 3, from 359 to 376: score 6.4, E = 0.21
*->mdsYlIqmngngsLvknk<-*
+dsY+ + ++ng+Lv k
gi|1134742 359 NDSYVAKFDSNGNLVWAK 376
ENOD40: domain 2 of 2, from 371 to 381: score 2.4, E = 23
*->melcWqksiHGs<-*
+l W k i Gs
gi|1134742 371 -NLVWAKRIGGS 381
SBBP: domain 4 of 7, from 373 to 401: score 13.0, E = 0.0069
*->qWstqlGPgpgasifgngIavDsnGNiYvtG<-*
+W++++G g++++ I++Ds+ N+ v+G
gi|1134742 373 VWAKRIG-GSNGNS-SGAITIDSSDNVLVAG 401
Peptidase_M66: domain 1 of 1, from 379 to 394: score 1.4, E = 2.4
*->GGsGGGssGivTldas<-*
GGs G+ssG++T+d+s
gi|1134742 379 GGSNGNSSGAITIDSS 394
MCD: domain 1 of 1, from 412 to 428: score 0.3, E = 2.2
*->mLvekFgsdkekLdqAIdkYRA<-*
+++ +F+s+ e+ d Y A
gi|1134742 412 DGNNNFTSNGEA-----DSYVA 428
Fil_haemagg: domain 2 of 2, from 418 to 504: score 13.4, E = 0.0039
CS EEESSEEEETT TT--EE-SEEEEEE-STT-EEEE-
*->vaaGaltlnaa............alggldlnnggtlsagggltltaa
++ G + +a+ +++++ +++g++ ++ + ++ ++ + ++ +
gi|1134742 418 TSNGEADSYVAkfdsngnfvwakQFGSIRADYINSITTDSNGNVLVG 464
CS S-EEESSE...................EEEEESS-EEEEE
gllnnggtliaggdlllaagalrnggdltltaaGdLdnsg<-*
gl+n ++++ g+ + +++++++g + l++ G+L ++
gi|1134742 465 GLFNSYIDIDGDGNNDFTSISDIDGYVAKLDSNGNLVWAK 504
TAT_ubiq: domain 2 of 3, from 423 to 444: score 4.2, E = 1.1
*->mdsYlIqmngngsLvknkvnGs<-*
dsY+ + ++ng+ v k Gs
gi|1134742 423 ADSYVAKFDSNGNFVWAKQFGS 444
Neugrin: domain 1 of 1, from 430 to 440: score 2.1, E = 1.3
*->FDsnGnFLYRi<-*
FDsnGnF++
gi|1134742 430 FDSNGNFVWAK 440
SBBP: domain 5 of 7, from 437 to 465: score 26.5, E = 7.7e-07
*->qWstqlGPgpgasifgngIavDsnGNiYvtG<-*
+W++q+G +a ++ n+I++DsnGN+ v+G
gi|1134742 437 VWAKQFG-SIRA-DYINSITTDSNGNVLVGG 465
Reg_prop: domain 3 of 5, from 444 to 467: score 4.1, E = 11
*->slpgg.vtfalledsdGrlWigt.n<-*
s+ ++ ++ +ds+G++++g+
gi|1134742 444 SIRADyIN-SITTDSNGNVLVGGlF 467
PhnA: domain 4 of 4, from 453 to 465: score 3.9, E = 4.5
*->ivkDsnGnlLadG<-*
i+ DsnGn+L G
gi|1134742 453 ITTDSNGNVLVGG 465
Thaumatin: domain 1 of 1, from 473 to 490: score -1.8, E = 6.6
CS EEET.TEEEEEEE-TT-B
*->LngfsnkDFyDISlvDGF<-*
++g++n DF IS +DG+
gi|1134742 473 IDGDGNNDFTSISDIDGY 490
TAT_ubiq: domain 3 of 3, from 487 to 510: score 6.0, E = 0.29
*->mdsYlIqmngngsLvknkvnGstl<-*
d Y+ + ++ng+Lv k Gs l
gi|1134742 487 IDGYVAKLDSNGNLVWAKQFGSSL 510
PQQ: domain 2 of 2, from 488 to 516: score 1.2, E = 19
CS TSEEEEEETTTTSEEEEEESSSGGGS GEE
*->dGylyAlDakTGkvlWkfktggpvds.pvt<-*
dGy+ lD ++G+++W ++ g+ +
gi|1134742 488 DGYVAKLD-SNGNLVWAKQFGSSLGGvVRS 516
SBBP: domain 6 of 7, from 501 to 530: score 22.5, E = 1.2e-05
*->qWstqlGPgpgasifgngIavDsnGNiYvtGs<-*
+W++q+G +++ + ++++++Ds+GN+ v+G+
gi|1134742 501 VWAKQFG-SSLGGV-VRSLTTDSSGNVLVVGN 530
Reg_prop: domain 4 of 5, from 508 to 532: score 2.0, E = 37
*->slpgg.vtfalledsdG.rlWigt.n<-*
s gg v+ +l +ds G++l +g+
gi|1134742 508 SSLGGvVR-SLTTDSSGnVLVVGNfS 532
Invasin_D3: domain 1 of 1, from 527 to 537: score 1.7, E = 5.8
CS EE-SS-EEEEE
*->VVGNsvGDVdI<-*
VVGN GDVdI
gi|1134742 527 VVGNFSGDVDI 537
FAINT: domain 1 of 1, from 534 to 595: score 8.5, E = 0.069
*->tLDlnnsessnkksstdefdyikvhlslsngvnyktytpksgykrfs
+D+++ +++++ sng++++t+t+k
gi|1134742 534 DVDIDGDGNNDFT---------------SNGNGNHTFTAK------- 558
kVnkdtvNiSqygneglitsgdtviWeskdgeelskvvvvylkdkkkvlv
y+++ ++++W k + + +++++++++++
gi|1134742 559 -----------YDSN------GNLVWV-KHNLHNAYTITTDSSGN----- 585
nslNpkskylvlllinnsk<-*
++++ + n++
gi|1134742 586 ---------VLMVSDFNGN 595
Reg_prop: domain 5 of 5, from 548 to 568: score 1.2, E = 59
*->slpgg.vtfalledsdG.rlWi<-*
+++g++ + + +ds+G+ +W+
gi|1134742 548 NGNGNhTF-TAKYDSNGnLVWV 568
SBBP: domain 7 of 7, from 575 to 597: score 3.7, E = 4
*->gngIavDsnGNiYvtGstngnnfe<-*
++ I++Ds+GN+ + + ng n++
gi|1134742 575 AYTITTDSSGNVLMVSDFNG-NID 597
Fimbrial_K88: domain 1 of 1, from 592 to 600: score 0.5, E = 7.9
*->fnGeidiGG<-*
fnG+idi G
gi|1134742 592 FNGNIDIDG 600
Cadherin: domain 1 of 1, from 633 to 721: score 20.0, E = 5.1e-05
CS --EEE-SS...S---EEEEE---S..-TTTT----------S S-
*->ysasvpEnapvGtevltvtAtDaDdPlgpNgrirYsilggnp...gg
+ ++ En++ +t+++++ tD+D + +Ys+++g ++++g
gi|1134742 633 SNNTIDENVAANTPIGNLSSTDPD----TGDTFTYSLVSGAGdtdNG 675
CS ---B-TTSSEEE..E---S---S.....S-B--EEE----.........S
wFrIdpdtGdnegiisttkpLDREeifngeYeLtveAtDadpllasgggp
+F I + ++++ + D+E + Y++ ve tDa+
gi|1134742 676 TFNISG--DE----LTIKSSPDYENK--PSYSIRVETTDAA--------- 708
CS ---EEEE--EEE-
plsstatvtitVl<-*
+ + ++ti+V
gi|1134742 709 GETYQKELTINVN 721
He_PIG: domain 1 of 1, from 673 to 709: score 4.3, E = 2
*->dsstGritGt.......PtptvqpGsytftvtatdgsg<-*
d+ t +i+G++ + +++P++ p sy+++v td++g
gi|1134742 673 DNGTFNISGDeltikssPDYENKP-SYSIRVETTDAAG 709
Y_Y_Y: domain 1 of 1, from 697 to 721: score 2.6, E = 4.6
*->kYtikvkakdkdgnwsyddiasltftvl<-*
+Y i+v+++d g++ + ++lt++v+
gi|1134742 697 SYSIRVETTDAAGETYQ---KELTINVN 721
HemolysinCabind: domain 1 of 8, from 725 to 742: score 18.6, E = 0.00018
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G+ GnD+L+G+a +D +
gi|1134742 725 DGNSGNDILRGTAAADSI 742
DUF2391: domain 1 of 1, from 730 to 737: score 1.6, E = 2.1
*->ndlaRGtA<-*
nd++RGtA
gi|1134742 730 NDILRGTA 737
HemolysinCabind: domain 2 of 8, from 743 to 760: score 21.9, E = 1.8e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
yG +G+D LyG +GnD++
gi|1134742 743 YGLEGRDKLYGKGGNDII 760
HemolysinCabind: domain 3 of 8, from 761 to 778: score 14.2, E = 0.0038
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GGa D+ G++G+D+l
gi|1134742 761 SGGADSDIVKGDSGDDQL 778
HemolysinCabind: domain 4 of 8, from 779 to 796: score 20.2, E = 5.8e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G++G+D+LyGg GnD++
gi|1134742 779 NGDDGRDRLYGGTGNDII 796
HemolysinCabind: domain 5 of 8, from 797 to 814: score 13.6, E = 0.0058
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+ D+ G++G+D+l
gi|1134742 797 SGGEDKDIVKGDSGDDQL 814
HemolysinCabind: domain 6 of 8, from 815 to 832: score 22.0, E = 1.7e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G+aG D+LyGg GnD+l
gi|1134742 815 NGDAGPDRLYGGTGNDIL 832
HemolysinCabind: domain 7 of 8, from 833 to 850: score 17.7, E = 0.00033
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
GG+GnD LyG +G+D l
gi|1134742 833 LGGDGNDLLYGQGGDDEL 850
HemolysinCabind: domain 8 of 8, from 851 to 868: score 15.4, E = 0.0017
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G D+LyG +G Dt+
gi|1134742 851 NGGPGMDRLYGSDGIDTF 868
Acetate_kinase: domain 1 of 1, from 916 to 924: score 1.8, E = 1.3
CS --HHHHHHH
*->TNEElaIAr<-*
T+EElaI+
gi|1134742 916 TGEELAIVL 924
//