hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 115715483.fa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query sequence: gi|115715483|ref|XP_780226.2|
Accession: [none]
Description: PREDICTED: similar to epithelial cell transforming sequence 2 oncogene [Strongylocentrotus purpuratus]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
RhoGEF RhoGEF domain 104.8 1.2e-30 1
Death Death domain 11.6 0.013 1
L27 L27 domain 9.5 0.084 2
Bcl-2 Apoptosis regulator proteins, Bcl-2 f 3.5 0.18 1
Glycos_transf_2 Glycosyl transferase family 2 4.4 0.58 1
PGA2 Protein trafficking PGA2 4.3 0.84 1
Orexin_rec2 Orexin receptor type 2 3.2 1.1 1
TYW3 Methyltransferase TYW3 3.2 1.5 1
SRP54_N SRP54-type protein, helical bundle do 4.5 1.8 1
Fib_gamma Fibrinogen gamma chain 3.8 1.8 1
FliM Flagellar motor switch protein FliM 2.8 1.8 1
I_LWEQ I/LWEQ domain 2.5 2.4 1
2CSK_N Two-component sensor kinase N-termina 2.8 2.6 1
MethylPyrKinase Archaeal phosphomethylpyrimidine kina 3.1 2.7 1
LRV Leucine rich repeat variant 5.5 2.9 1
GILT Gamma interferon inducible lysosomal 3.1 3.1 1
RDV-p3 Rice dwarf virus p3 -1.8 3.1 1
Frataxin_Cyay Frataxin-like domain 2.7 3.2 1
PIH1 pre-RNA processing PIH1/Nop17 0.7 3.3 1
HisKA His Kinase A (phosphoacceptor) domain 3.2 3.7 1
DUF1819 Putative inner membrane protein (DUF1 1.8 3.7 1
DUF2173 Uncharacterized conserved protein (DU 2.3 4.4 1
Peptidase_M50 Peptidase family M50 2.6 4.7 1
Invas_B Salmonella/Shigella invasin protein B 0.0 4.8 1
PCRF PCRF domain 3.0 4.8 1
VRP3 Salmonella virulence-associated 28kDa 0.1 5 1
Val_tRNA-synt_C Valyl tRNA synthetase tRNA binding ar 3.1 5.3 1
RuvA_C RuvA, C-terminal domain 3.6 6.2 1
PH PH domain 2.0 6.2 1
Anth_synt_I_N Anthranilate synthase component I, N 0.9 6.3 1
AFOR_C Aldehyde ferredoxin oxidoreductase, d -0.6 6.5 1
NTP_transferase Nucleotidyl transferase 0.4 6.6 1
FAD_binding_6 Oxidoreductase FAD-binding domain 2.0 7 1
PGM_PMM_I Phosphoglucomutase/phosphomannomutase 1.6 7 1
DUF2451 Protein of unknown function C-terminu 1.4 7.1 1
Ribosomal_S4 Ribosomal protein S4/S9 N-terminal do 2.0 7.2 1
DUF1280 Protein of unknown function (DUF1280) 1.0 7.2 1
Sigma70_r1_1 Sigma-70 factor, region 1.1 2.1 7.3 1
DUF2510 Protein of unknown function (DUF2510) 2.1 7.3 1
DUF1313 Protein of unknown function (DUF1313) 1.9 7.5 1
MCLC Mid-1-related chloride channel (MCLC) -1.3 7.9 1
DUF2070 Predicted membrane protein (DUF2070) 1.1 8.1 1
DUF30 Domain of unknown function DUF30 1.4 8.3 1
Hpt Hpt domain 2.2 8.5 1
Pmp24 Peroxisomal membrane protein 24 0.4 8.6 1
Mu-like_Pro Mu-like prophage I protein -0.3 8.7 1
MIB_HERC2 Mib_herc2 1.5 8.8 1
RCSD RCSD region 0.7 8.9 1
DUF2581 Protein of unknown function (DUF2581) 1.1 9.3 1
DUF742 Protein of unknown function (DUF742) 0.8 9.3 1
RHH_2 Uncharacterised protein family (UPF01 1.1 9.4 1
DUF1193 Protein of unknown function (DUF1193) 0.1 9.7 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
RDV-p3 1/1 61 67 .. 961 967 .] -1.8 3.1
RHH_2 1/1 114 122 .. 1 9 [. 1.1 9.4
Invas_B 1/1 124 134 .. 339 349 .] 0.0 4.8
Peptidase_M50 1/1 141 492 .. 92 127 .. 2.6 4.7
PGA2 1/1 207 241 .. 102 139 .] 4.3 0.84
DUF1819 1/1 215 240 .. 102 127 .. 1.8 3.7
PIH1 1/1 236 245 .. 337 346 .] 0.7 3.3
RCSD 1/1 286 294 .. 1 9 [. 0.7 8.9
MCLC 1/1 397 420 .. 509 533 .. -1.3 7.9
Death 1/1 488 571 .. 1 87 [] 11.6 0.013
Mu-like_Pro 1/1 496 504 .. 356 364 .] -0.3 8.7
Pmp24 1/1 518 539 .. 184 210 .] 0.4 8.6
I_LWEQ 1/1 520 535 .. 187 202 .] 2.5 2.4
MIB_HERC2 1/1 592 598 .. 1 7 [. 1.5 8.8
FliM 1/1 635 644 .. 184 193 .] 2.8 1.8
DUF2070 1/1 646 673 .. 164 191 .] 1.1 8.1
GILT 1/1 684 702 .. 100 122 .] 3.1 3.1
FAD_binding_6 1/1 691 710 .. 85 106 .. 2.0 7
Frataxin_Cyay 1/1 741 752 .. 73 85 .. 2.7 3.2
DUF2510 1/1 752 773 .. 23 51 .] 2.1 7.3
Orexin_rec2 1/1 768 774 .. 55 61 .] 3.2 1.1
SRP54_N 1/1 801 839 .. 50 90 .] 4.5 1.8
Anth_synt_I_N 1/1 806 852 .. 58 104 .. 0.9 6.3
RuvA_C 1/1 812 839 .. 27 52 .] 3.6 6.2
Hpt 1/1 814 841 .. 81 108 .] 2.2 8.5
DUF1280 1/1 823 841 .. 132 150 .. 1.0 7.2
DUF2173 1/1 825 834 .. 103 112 .] 2.3 4.4
L27 1/2 825 849 .. 32 56 .] 9.2 0.1
AFOR_C 1/1 827 842 .. 1 16 [. -0.6 6.5
TYW3 1/1 827 840 .. 213 226 .] 3.2 1.5
Val_tRNA-synt_C 1/1 828 839 .. 55 66 .] 3.1 5.3
MethylPyrKinase 1/1 829 843 .. 1 15 [. 3.1 2.7
LRV 1/1 832 843 .. 15 26 .] 5.5 2.9
Fib_gamma 1/1 874 884 .. 67 77 .] 3.8 1.8
PCRF 1/1 887 908 .. 1 22 [. 3.0 4.8
PGM_PMM_I 1/1 894 917 .. 126 149 .] 1.6 7
Bcl-2 1/1 896 926 .. 1 32 [. 3.5 0.18
2CSK_N 1/1 963 973 .. 143 153 .] 2.8 2.6
RhoGEF 1/1 968 1151 .. 1 207 [] 104.8 1.2e-30
Glycos_transf_2 1/1 990 1059 .. 96 149 .] 4.4 0.58
DUF30 1/1 1051 1063 .. 1 13 [. 1.4 8.3
DUF1193 1/1 1066 1081 .. 214 236 .] 0.1 9.7
HisKA 1/1 1114 1151 .. 23 76 .. 3.2 3.7
DUF2581 1/1 1131 1145 .. 126 140 .. 1.1 9.3
L27 2/2 1134 1165 .. 1 29 [. 0.3 35
Sigma70_r1_1 1/1 1137 1156 .. 1 21 [. 2.1 7.3
DUF1313 1/1 1154 1185 .. 1 32 [. 1.9 7.5
DUF742 1/1 1159 1168 .. 116 125 .] 0.8 9.3
DUF2451 1/1 1162 1187 .. 1 22 [. 1.4 7.1
NTP_transferase 1/1 1174 1185 .. 314 325 .] 0.4 6.6
PH 1/1 1215 1299 .. 21 92 .] 2.0 6.2
VRP3 1/1 1237 1247 .. 230 240 .] 0.1 5
Ribosomal_S4 1/1 1283 1295 .. 98 110 .] 2.0 7.2
Alignments of top-scoring domains:
RDV-p3: domain 1 of 1, from 61 to 67: score -1.8, E = 3.1
*->HeVllDP<-*
H+V++DP
gi|1157154 61 HDVKIDP 67
RHH_2: domain 1 of 1, from 114 to 122: score 1.1, E = 9.4
*->MsKNTSvvL<-*
M K+TSv L
gi|1157154 114 MHKITSVEL 122
Invas_B: domain 1 of 1, from 124 to 134: score 0.0, E = 4.8
*->aRltkfLGavG<-*
+R+ + Ga+G
gi|1157154 124 QRIAEGAGAAG 134
Peptidase_M50: domain 1 of 1, from 141 to 492: score 2.6, E = 4.7
RF xxxxxxxxxxxxxxxxxxxxxxxxxxx
*->aaAGPlaNfiLAlllfalllllggipl....................
aaAG + +++++ + +++++++gg + + ++ +++ + +++
gi|1157154 141 AAAGAAGGVWFGGVGAGVGAVIGGLAGgiggmfagkgidymiwdqge 187
RF
..................................................
+ + ++ + +++ + + ++++ + ++++ + + ++
gi|1157154 188 davmnsyeffgrydvdrserprmspkkmeeayaeklnnkpenmeeedwnk 237
RF
..................................................
+++ ++++ ++++++ ++ +++++ ++ ++++ + ++ ++++ ++
gi|1157154 238 yldvtmpvsvaknvqspeafnsecntsqtrsqcdgpdcdavkesgsscdv 287
RF
..................................................
++++++ ++ + ++ ++++++ + ++++ ++++ +++++ + + ++ +
gi|1157154 288 kspgpnevshsesscaenggsptanetnpvrdssgiqnpdprpwsedted 337
RF
..................................................
+++ + ++ +++++++ ++++++ ++++ + +++ +++ ++ +
gi|1157154 338 dkdiainlmspesptkssqisktdqpevgtsesysnvhaavpgetdrikl 387
RF
..................................................
++ ++++ ++++ +++++ ++ + ++++ ++ +++++ ++++ ++++
gi|1157154 388 dkeetsnsapsgkedqssdlspesrqdttrnteqttpsikkvteyhgspt 437
RF xxxx
..............................................assg
++ +++ ++ + ++++ ++ ++ ++++ ++++++++++++
gi|1157154 438 ypvlgsgitsceadaikgndcpdmtnilllrsgdvernpgpdnnpgSLTE 487
RF xxxxx
liall<-*
++ +l
gi|1157154 488 FELYL 492
PGA2: domain 1 of 1, from 207 to 241: score 4.3, E = 0.84
*->RqRmvIkKliEeeedkldkSkldAYAddDkDIEEfLld<-*
R Rm kK+ E++ +kl +++ + +D +L
gi|1157154 207 RPRMSPKKMEEAYAEKLNNKPEN---MEEEDWNKYLDV 241
DUF1819: domain 1 of 1, from 215 to 240: score 1.8, E = 3.7
*->mdeVvaEklRtlkydLehkdwDeFfa<-*
m e +aEkl ++ + e +dw+ +++
gi|1157154 215 MEEAYAEKLNNKPENMEEEDWNKYLD 240
PIH1: domain 1 of 1, from 236 to 245: score 0.7, E = 3.3
*->krtLtVTmPV<-*
++ L VTmPV
gi|1157154 236 NKYLDVTMPV 245
RCSD: domain 1 of 1, from 286 to 294: score 0.7, E = 8.9
*->dVkSpgkkE<-*
dVkSpg+ E
gi|1157154 286 DVKSPGPNE 294
MCLC: domain 1 of 1, from 397 to 420: score -1.3, E = 7.9
*->elvtEdssikKsvKESrnDergNTE<-*
++ +Ed s+ s ESr+D+ NTE
gi|1157154 397 PSGKEDQSSDLSP-ESRQDTTRNTE 420
Death: domain 1 of 1, from 488 to 571: score 11.6, E = 0.013
CS HHHHHHH..HHCCCTCHHHHHHHCC--HHHHHHHHHHHTTC.HHHHH
*->eklcallDpdellgkdWkeLArkLglseneIdeiesdenpgdlrspt
+l+ l+ + + ++d ++++ Lg++e+++ ++e+ + g++ +
gi|1157154 488 FELYLLA--EGMDPSDFRKVGLALGFTEAQLSRFER-DKLGNSMQAS 531
CS HHHHHHHHHHHTCCHCHHHHHHHHHHCTHHHHHHHHHHHC
yeLLrlWeqrhGknatvgtLleaLrklgrrdaaellesal<-*
y++L W+ + g L+ L+++++ +a++++
gi|1157154 532 YQMLYEWRKTVRESKERGILVNKLESIKMVKLADSVRKGR 571
Mu-like_Pro: domain 1 of 1, from 496 to 504: score -0.3, E = 8.7
*->GispEeflK<-*
G++p +f K
gi|1157154 496 GMDPSDFRK 504
Pmp24: domain 1 of 1, from 518 to 539: score 0.4, E = 8.6
*->eYhPetLQpSLrsSMtYLYhvDsesws<-*
++++++L +S++ S + LY+ w+
gi|1157154 518 RFERDKLGNSMQASYQMLYE-----WR 539
I_LWEQ: domain 1 of 1, from 520 to 535: score 2.5, E = 2.4
CS XXXXXXXXXXXXXXXX
*->ARkkLaelRKqhYela<-*
+R kL+++ +++Y +
gi|1157154 520 ERDKLGNSMQASYQML 535
MIB_HERC2: domain 1 of 1, from 592 to 598: score 1.5, E = 8.8
*->GaRVVRG<-*
G++V+RG
gi|1157154 592 GSKVIRG 598
FliM: domain 1 of 1, from 635 to 644: score 2.8, E = 1.8
*->itiEPIrskL<-*
+tiE+++++L
gi|1157154 635 STIESLLEML 644
DUF2070: domain 1 of 1, from 646 to 673: score 1.1, E = 8.1
*->vevgyatevvkGvkvlGedwfrilsstv<-*
++vg+ ++ G+ +lGed+ ri+ ++
gi|1157154 646 ATVGSHQARSIGLFTLGEDSVRIIREMA 673
GILT: domain 1 of 1, from 684 to 702: score 3.1, E = 3.1
*->itnyseevkdAvQrClkelgpek<-*
i+n++e+++ C++++ ++
gi|1157154 684 IKNFWESFSQ----CIESAKEGG 702
FAD_binding_6: domain 1 of 1, from 691 to 710: score 2.0, E = 7
CS HHHHH.HCTSTTTEEEEEEEEE
*->mSqyLfdsqlkvGdtvevkGPl<-*
+Sq + +s +k+G ++++ +Pl
gi|1157154 691 FSQCI-ES-AKEGGSMDFFAPL 710
Frataxin_Cyay: domain 1 of 1, from 741 to 752: score 2.7, E = 3.2
CS EEEEET.TEEEBT
*->HFdydgageWidt<-*
+Fdy+ geW+dt
gi|1157154 741 RFDYVT-GEWLDT 752
DUF2510: domain 1 of 1, from 752 to 773: score 2.1, E = 7.3
*->TdHlvPtaaiPavqpaaaappaPaaapqP<-*
T+H t+ P p++++ + +a+ q+
gi|1157154 752 TAH---TR--P--NPSPHSLYFQAGPLQA 773
Orexin_rec2: domain 1 of 1, from 768 to 774: score 3.2, E = 1.1
*->AGPLqnW<-*
AGPLq W
gi|1157154 768 AGPLQAW 774
SRP54_N: domain 1 of 1, from 801 to 839: score 4.5, E = 1.8
CS HHHHHHHHHHHHTTGGG...STSHCHHHHHHHHHHHHHHCC
*->kklikkikekavgeevsnKpkglnpkeqiikivkeeLvkll<-*
++l+ ++ +v++e+ + +gl++ +qi+++++e+L +l
gi|1157154 801 EQLLHRVTGDVVLQELGE--DGLSVCDQIMEALREALEELA 839
Anth_synt_I_N: domain 1 of 1, from 806 to 852: score 0.9, E = 6.3
CS EE-................S-HHHHHHTTTTT------SS...S-SS
*->rlkdgqtvveddgeekfvegdpldaLrellelyklapdpglplpFqG
r++++++ e +++ ++v+ ++aLre le++++ pd + p F G
gi|1157154 806 RVTGDVVLQELGEDGLSVCDQIMEALREALEELARHPDQPNPAAFLG 852
CS
<-*
gi|1157154 - -
RuvA_C: domain 1 of 1, from 812 to 839: score 3.6, E = 6.2
CS CHCT. -SSS- ---HHHHHCCCCCCCT
*->vleel.dpgls.tddveelIRaALklLs<-*
vl+el+++gls d++ e++R+AL +L+
gi|1157154 812 VLQELgEDGLSvCDQIMEALREALEELA 839
Hpt: domain 1 of 1, from 814 to 841: score 2.2, E = 8.5
CS S...HHHHHHHHHHHHHHHHHHHHHCHH
*->vpadaeavdlllqllealrallealraa<-*
+++ + ++ ++ q++ealr++le+l +
gi|1157154 814 QELGEDGLSVCDQIMEALREALEELARH 841
DUF1280: domain 1 of 1, from 823 to 841: score 1.0, E = 7.2
*->vikdvekvLtrRLEtLdah<-*
v++ ++++L++ LE+L++h
gi|1157154 823 VCDQIMEALREALEELARH 841
DUF2173: domain 1 of 1, from 825 to 834: score 2.3, E = 4.4
*->nkifkaLrea<-*
++i++aLrea
gi|1157154 825 DQIMEALREA 834
L27: domain 1 of 2, from 825 to 849: score 9.2, E = 0.1
CS SCCHHHHHHHHHHHHHHHHC---XX
*->sphlqsLlevHDkvaekvydppspe<-*
++++++L+e+ +++a+++++p++ +
gi|1157154 825 DQIMEALREALEELARHPDQPNPAA 849
AFOR_C: domain 1 of 1, from 827 to 842: score -0.6, E = 6.5
CS HHHHHHHHHHHHHHSH
*->fkelvkeilkriksnp<-*
+e+++e+l++++++p
gi|1157154 827 IMEALREALEELARHP 842
TYW3: domain 1 of 1, from 827 to 840: score 3.2, E = 1.5
*->KLkRLedrleklkk<-*
++ +L+++le+l +
gi|1157154 827 IMEALREALEELAR 840
Val_tRNA-synt_C: domain 1 of 1, from 828 to 839: score 3.1, E = 5.3
*->leklkerLsqLa<-*
+e+l+e+L++La
gi|1157154 828 MEALREALEELA 839
MethylPyrKinase: domain 1 of 1, from 829 to 843: score 3.1, E = 2.7
*->eelrrAlelLeseev<-*
e+lr+Ale+L++ ++
gi|1157154 829 EALREALEELARHPD 843
LRV: domain 1 of 1, from 832 to 843: score 5.5, E = 2.9
CS GGGGGGGTT-SS
*->peaLerLaaDpd<-*
+eaLe+La+ pd
gi|1157154 832 REALEELARHPD 843
Fib_gamma: domain 1 of 1, from 874 to 884: score 3.8, E = 1.8
CS HHHHHHHHHCC
*->esaTqkSKkMl<-*
++aT+ SKkM
gi|1157154 874 DGATRQSKKMS 884
PCRF: domain 1 of 1, from 887 to 908: score 3.0, E = 4.8
CS HHHHCCTTTHHCHHHHHHHHHH
*->ElaeeeesDeelrelaeeElee<-*
+la e+++D ++ e++eeE+ee
gi|1157154 887 KLASESQDDLSIGEDIEEEIEE 908
PGM_PMM_I: domain 1 of 1, from 894 to 917: score 1.6, E = 7
CS .CEEECCCCCHCCCCCHHCHHHHC
*->DGgqippdveeeIeaiiekidfyr<-*
D i++d+eeeIe+ ++++++++
gi|1157154 894 DDLSIGEDIEEEIEEEYDEGSEQE 917
Bcl-2: domain 1 of 1, from 896 to 926: score 3.5, E = 0.18
CS HHHHHHHHHHH-SSSHHHHHHHH-S-HHHHHH
*->LrraGdelekrveraFssmsrqlhitpetAre<-*
+++G+++e++ e+++ + s+q+ i+p +r+
gi|1157154 896 -LSIGEDIEEEIEEEYDEGSEQELIKPTKSRS 926
2CSK_N: domain 1 of 1, from 963 to 973: score 2.8, E = 2.6
*->eaRqalAaeil<-*
e R+alA+eil
gi|1157154 963 ERRRALANEIL 973
RhoGEF: domain 1 of 1, from 968 to 1151: score 104.8, E = 1.2e-30
*->vlkElleTEkkYvrdLeildnvymkpLreaaisskplLtpddietiF
+++E+l +E++Y+r+L i+ nvy ++L +a +s +++++ i+ iF
gi|1157154 968 LANEILDSERVYLRRLNIIHNVYFERLAAALRSNHAIIGQTNISLIF 1014
sNiediyefhreFLkssLearisssnfedlDekkiepsaqrlGdlFlelk
++ + i+ ++r ++ +L+ r++s+ + + +lGd+F+++
gi|1157154 1015 TDTNNILNVTRGLFE-ELKGRVESW-----------SVQMCLGDCFIKF- 1051
aeflqvYgeYcsnkpyAqelleklrqaasnpqFaefldeveassntgAkd
+ l+ Y+ + +n+ + +++k +++++p+F+ fl++ s+ +
gi|1157154 1052 QSKLKAYTNFHNNYAIVLSTIDK--CREQEPSFRAFLKQHDSSASSE--- 1096
davkltLqsLLlkPvqRilrYpLLLkeLLkhtpegedssesedLkkalda
tL+ LLl +i Y+ LL + + tp d++++edL+ a+d
gi|1157154 1097 ---MMTLDELLLGVAHHIHHYTRLLLAIHHATPD--DHPDKEDLMTAIDT 1141
lqdlaksiNe<-*
+ l i++
gi|1157154 1142 FRQLQDLIDQ 1151
Glycos_transf_2: domain 1 of 1, from 990 to 1059: score 4.4, E = 0.58
CS HHHHHHHHHHH-TTEECEE EE EE C E EE- ECCC H H H
*->aleklvellekngadivig.rv.in.e.n.kgr....lngk.l.l.l
++e+l+++l++n a+i ++ i++++n+ +++l+++ +++ +
gi|1157154 990 YFERLAAALRSNHAIIGQTnISlIFtDtNnILNvtrgLFEElKgRvE 1036
CS T S CCS CGGCCCECCCHHHH
.l.v.fli.snalyrrealekll<-*
+++v+ + + +++ +++ l+ +
gi|1157154 1037 sWsVqMCLgDCFIKFQSKLKAYT 1059
DUF30: domain 1 of 1, from 1051 to 1063: score 1.4, E = 8.3
*->faklsnfklkYhg<-*
f++++++++++h+
gi|1157154 1051 FQSKLKAYTNFHN 1063
DUF1193: domain 1 of 1, from 1066 to 1081: score 0.1, E = 9.7
*->livlqtvedCiekeGlddVivdD<-*
+ivl+t+ +C+e+e
gi|1157154 1066 AIVLSTIDKCREQEP-------S 1081
HisKA: domain 1 of 1, from 1114 to 1151: score 3.2, E = 3.7
*->yaelLleeldvlagdtelseeqrlpeLRledpeyreyletilreaer
y+ lLl+ ++ t+ + ++ +e l t+++ ++
gi|1157154 1114 YTRLLLA----IHHATPDDHPD------------KEDLMTAIDTFRQ 1144
llrLind<-*
l++Li++
gi|1157154 1145 LQDLIDQ 1151
DUF2581: domain 1 of 1, from 1131 to 1145: score 1.1, E = 9.3
*->DKerAVeAmdrfReL<-*
DKe+ A+d+fR+L
gi|1157154 1131 DKEDLMTAIDTFRQL 1145
L27: domain 2 of 2, from 1134 to 1165: score 0.3, E = 35
CS HHHHHHHCHHHHCCCT-S.H HHHHHHHHH
*->avqralelLeeLqsllease...edlaeLrkv<-*
++++a+++ +Lq+l +++ +++e + L+++
gi|1157154 1134 DLMTAIDTFRQLQDLIDQNKqrgERERVLKGL 1165
Sigma70_r1_1: domain 1 of 1, from 1137 to 1156: score 2.1, E = 7.3
*->ledlsqaqvKkqLIelGKerG<-*
++ + q+++ LI + K+rG
gi|1157154 1137 TAIDTFRQLQD-LIDQNKQRG 1156
DUF1313: domain 1 of 1, from 1154 to 1185: score 1.9, E = 7.5
*->eqgmDgkllqtfdksFvqVQsiLDqNRlLIne<-*
++g+ ++l+ ++k v s+L NR L+++
gi|1157154 1154 QRGERERVLKGLQKRIVGCPSLLEANRFLVQQ 1185
DUF742: domain 1 of 1, from 1159 to 1168: score 0.8, E = 9.3
*->eeVldGLRrL<-*
e+Vl GL++
gi|1157154 1159 ERVLKGLQKR 1168
DUF2451: domain 1 of 1, from 1162 to 1187: score 1.4, E = 7.1
*->LYGLkeRiiA....vESlsfvarqfn<-*
L GL++Ri++ ++ +E+ +f+++q++
gi|1157154 1162 LKGLQKRIVGcpslLEANRFLVQQLE 1187
NTP_transferase: domain 1 of 1, from 1174 to 1185: score 0.4, E = 6.6
CS HHHHHHHHHHHH
*->sLweanlklltg<-*
sL+ean++l ++
gi|1157154 1174 SLLEANRFLVQQ 1185
PH: domain 1 of 1, from 1215 to 1299: score 2.0, E = 6.2
CS EEEETTEEEEEESTT SSEEEEEEGGCEEEEEECST
*->fvLfddvLlyykdkk............skpkgsipLsgiqvtkvedn
++Lf+d L+ +++++ + ++++++ ++ ++L +qv +v+d+
gi|1157154 1215 LFLFNDALVVTHEGSrhvpytrrsetfYRFMVALSLTRLQVQDVPDS 1261
CS TSTTEEEEEE TSEEEEEECSSHHHHHHHHHHHHHHHH
.krknvFeirt.dretlllqaeseeerkeWikaiqsair<-*
+ ++++ ++++ + +ll +ae++ ++ ++ +++ ir
gi|1157154 1262 kYVQHAILLVSpKK-RLLCSAEDYSSKVALLSILEETIR 1299
VRP3: domain 1 of 1, from 1237 to 1247: score 0.1, E = 5
*->REEPFYRLmiE<-*
R E FYR m+
gi|1157154 1237 RSETFYRFMVA 1247
Ribosomal_S4: domain 1 of 1, from 1283 to 1295: score 2.0, E = 7.2
CS S-HHHHHHHHHHT
*->kgslgenllqlLE<-*
++s ++ ll +LE
gi|1157154 1283 DYSSKVALLSILE 1295
//