hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 117618727.fa
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Query sequence: gi|117618727|ref|YP_855898.1|
Accession: [none]
Description: structural toxin protein RtxA [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
RtxA RtxA repeat 618.7 1.3e-183 47
HemolysinCabind Hemolysin-type calcium-binding repeat 31.8 1.7e-08 8
Abhydrolase_1 alpha/beta hydrolase fold 14.8 0.00076 1
CBM_4_9 Carbohydrate binding domain 14.9 0.00087 1
Peptidase_C58 Yersinia/Haemophilus virulence surfac 12.2 0.0054 1
Adeno_shaft Adenoviral fibre protein (repeat/shaf 12.2 0.034 4
Abhydrolase_3 alpha/beta hydrolase fold 8.5 0.057 1
DUF461 Protein of unknown function (DUF461) 7.6 0.14 2
DUF1008 Protein of unknown function (DUF1008) 7.8 0.14 1
zf-CHC2 CHC2 zinc finger 7.8 0.17 2
UPF0203 Uncharacterised protein family (UPF02 7.1 0.17 1
Corona_NS2 Coronavirus non-structural protein NS 7.8 0.18 1
SpoIIE Stage II sporulation protein E (SpoII 5.6 0.2 1
DMPK_coil DMPK coiled coil domain like 7.7 0.2 1
AlaDh_PNT_N Alanine dehydrogenase/PNT, N-terminal 5.0 0.22 1
Ins134_P3_kin Inositol 1, 3, 4-trisphosphate 5/6-ki 4.4 0.25 1
UPF0556 Uncharacterised protein family UPF055 4.8 0.38 1
DUF2002 Protein of unknown function (DUF2002) 4.7 0.46 1
DUF2514 Protein of unknown function (DUF2514) 4.8 0.47 1
Cortex-I_coil Cortexillin I, coiled coil 6.0 0.5 1
Peptidase_M6 Immune inhibitor A peptidase M6 2.4 0.52 1
Glyco_hydro_26 Glycosyl hydrolase family 26 4.0 0.54 1
M M protein repeat 8.6 0.54 2
OmpA OmpA family 6.0 0.61 1
YjeF_N YjeF-related protein N-terminus 3.8 0.84 1
RNA_ligase RNA ligase 3.3 1 1
Lycopene_cycl Lycopene cyclase protein 2.7 1.2 1
Spore_III_AE Stage III sporulation protein AE (spo 3.6 1.2 1
NMDAR2_C N-methyl D-aspartate receptor 2B3 C-t -2.3 1.2 1
Sec_GG SecD/SecF GG Motif 5.2 1.3 2
Hydrolase haloacid dehalogenase-like hydrolase 3.6 1.3 1
Antimicrobial_1 Frog antimicrobial peptide 3.0 1.5 1
DUF2168 Uncharacterized protein conserved in 1.8 1.5 1
Bcl-2 Apoptosis regulator proteins, Bcl-2 f 1.2 1.6 1
nsp9 nsp9 replicase 1.1 1.7 1
DUF1702 Protein of unknown function (DUF1702) 1.8 1.7 1
SlyX SlyX 0.9 1.7 1
RMF Ribosome modulation factor 4.3 1.7 1
Cupin_1 Cupin 3.4 1.8 1
TIMP Tissue inhibitor of metalloproteinase 0.3 1.8 1
RTX_C RTX C-terminal domain 3.3 1.9 1
AIP3 Actin interacting protein 3 2.5 1.9 1
TIP41 TIP41-like family 3.5 1.9 1
DUF1345 Protein of unknown function (DUF1345) 2.3 1.9 1
DUF669 Protein of unknown function (DUF669) 3.6 2 1
Cas_TM1812 CRISPR-associated protein (cas_TM1812 2.4 2 1
CorC_HlyC Transporter associated domain 4.2 2.1 1
XLF XLF (XRCC4-like factor) 2.9 2.2 1
Baculo_LEF-10 Baculovirus late expression factor 10 2.7 2.2 1
Cu_amine_oxidN2 Copper amine oxidase, N2 domain 3.9 2.3 1
OB_RNB Ribonuclease B OB domain 4.2 2.4 1
PCMT Protein-L-isoaspartate(D-aspartate) O 2.3 2.4 1
Glyco_hydro_16 Glycosyl hydrolases family 16 2.4 2.6 1
RTX RTX N-terminal domain -0.5 2.7 1
Fil_haemagg Haemagluttinin repeat 3.5 2.8 2
Pro_racemase Proline racemase 1.1 3 1
PDH Prephenate dehydrogenase 1.9 3 1
DUF2159 Predicted secreted (periplasmic) prot 2.7 3.1 1
PalH PalH/RIM21 0.9 3.2 1
CysG_dimeriser Sirohaem synthase dimerisation region 3.5 3.5 1
Flp_Fap Flp/Fap pilin component 4.4 3.6 1
DUF1416 Protein of unknown function (DUF1416) 3.6 4 1
Sec15 Exocyst complex subunit Sec15-like 0.8 4.1 1
Avian_gp85 Avian retrovirus envelope protein, gp 0.9 4.1 1
DUF2414 Protein of unknown function (DUF2414) 3.1 4.2 1
DUF2271 Predicted periplasmic protein (DUF227 1.8 4.2 1
CBP4 CBP4 2.0 4.4 1
FAD_binding_5 FAD binding domain in molybdopterin d 1.7 4.5 1
GSDH Glucose / Sorbosone dehydrogenase 2.1 4.6 1
Prefoldin Prefoldin subunit 2.8 4.6 1
Flavodoxin_2 Flavodoxin-like fold 1.4 4.6 1
RHS_repeat RHS Repeat 3.2 4.7 1
Polyketide_cyc2 Polyketide cyclase / dehydrase and li 2.6 4.7 1
Fibrillarin_2 Fibrillarin-like archaeal protein -0.5 4.7 1
GntP_permease GntP family permease 0.5 4.8 1
SelB-wing_1 Elongation factor SelB, winged helix 1.9 4.9 1
Thioesterase Thioesterase domain 1.3 4.9 1
BH4 Bcl-2 homology region 4 3.6 5 1
W_rich_C Tryptophan-rich Synechocystis species 1.4 5.1 2
Tyr-DNA_phospho Tyrosyl-DNA phosphodiesterase 0.2 5.1 1
Cm_res_leader Chloramphenicol resistance gene leade 4.1 5.3 2
Lipoprotein_3 Lipoprotein 2.1 5.3 1
SIP Siderophore-interacting protein 1.8 5.4 1
EXOSC1 Exosome component EXOSC1/CSL4 1.8 5.4 1
EzrA Septation ring formation regulator, E 0.3 5.5 1
DUF244 Uncharacterized protein family (ORF7) 1.3 5.5 1
Big_2 Bacterial Ig-like domain (group 2) 2.3 5.6 1
OpcA_G6PD_assem Glucose-6-phosphate dehydrogenase sub 0.8 5.6 1
Ribosomal_S4e Ribosomal family S4e 2.4 5.6 2
Transposase_30 Bacillus transposase protein 0.3 5.7 1
PQQ_C Pyrrolo-quinoline quinone coenzyme C- 4.3 5.8 1
PRF Plethodontid receptivity factor PRF -0.7 5.9 1
5HT_transporter Serotonin (5-HT) neurotransmitter tra 2.2 6 1
POP1 Ribonucleases P/MRP protein subunit P 1.1 6 1
Mu-transpos_C Mu transposase, C-terminal 2.6 6 1
DUF2134 Predicted membrane protein (DUF2134) 1.7 6.1 1
MRP-L47 Mitochondrial 39-S ribosomal protein 1.3 6.2 1
Herpes_BFRF1 Gammaherpesvirus BFRF1 protein 0.7 6.3 1
DUF1819 Putative inner membrane protein (DUF1 1.0 6.4 1
Tubulin Tubulin/FtsZ family, GTPase domain 0.5 6.4 1
Glyco_hydro_7 Glycosyl hydrolase family 7 -0.6 6.4 1
PI3K_C2 Phosphoinositide 3-kinase C2 1.5 6.5 1
Phyto_Pns9_10 Phytoreovirus nonstructural protein P -0.2 6.5 1
DUF374 Domain of unknown function (DUF374) 2.3 6.6 1
DUF116 Protein of unknown function DUF116 1.3 6.7 1
EKR Domain of unknown function 1.9 6.7 1
DUF2231 Predicted membrane protein (DUF2231) 1.5 6.7 1
DUF1105 Protein of unknown function (DUF1105) 0.8 6.7 1
ThiS ThiS family 0.4 6.8 1
Ocular_alb Ocular albinism type 1 protein -1.8 7.2 1
Host_attach Protein required for attachment to ho 1.6 7.3 1
Dor1 Dor1-like family -0.1 7.3 1
ATP-synt_C ATP synthase subunit C 2.6 7.3 1
DGOK 2-keto-3-deoxy-galactonokinase -1.6 7.5 1
Pou Pou domain - N-terminal to homeobox d 1.7 7.6 1
UBA UBA/TS-N domain 2.9 7.6 1
DUF1780 Protein of unknown function (DUF1780) 0.2 7.6 1
Fimbrial Fimbrial protein 0.8 7.7 2
PhageMin_Tail Phage-related minor tail protein 1.2 7.7 1
zf-U1 U1 zinc finger 2.3 7.8 1
Terminase_GpA Phage terminase large subunit (GpA) -1.3 7.9 1
DUF2149 Uncharacterized conserved protein (DU 1.7 8 2
ABC_tran ABC transporter 0.5 8.1 1
Amidohydro_1 Amidohydrolase family -0.6 8.1 1
DUF72 Protein of unknown function DUF72 0.9 8.2 1
DUF2288 Protein of unknown function (DUF2288) 1.6 8.3 1
ACC_central Acetyl-CoA carboxylase, central regio -1.8 8.4 1
Rieske Rieske [2Fe-2S] domain 1.5 8.5 1
RGP Reversibly glycosylated polypeptide -1.4 8.6 1
Tir_receptor_M Translocated intimin receptor (Tir) i 1.0 8.7 1
Glyco_hydro_14 Glycosyl hydrolase family 14 0.0 8.8 1
DUF2342 Uncharacterised conserved protein (DU 0.0 8.8 1
Hexapep Bacterial transferase hexapeptide (th 3.4 8.9 2
DUF2387 Probable metal-binding protein (DUF23 1.4 9 1
malic Malic enzyme, N-terminal domain -0.9 9.1 1
GET2 GET complex subunit GET2 -0.8 9.2 1
DUF1086 Domain of Unknown Function (DUF1086) 0.3 9.2 1
TrbI_Ftype Type-F conjugative transfer system pr 1.6 9.3 1
DUF1683 Protein of unknown function (DUF1683) 1.0 9.4 1
Phage_lysis Bacteriophage lysis protein 0.3 9.4 1
FliT Flagellar protein FliT 1.3 9.4 1
HTH_6 Helix-turn-helix domain, rpiR family 1.1 9.6 1
DUF2269 Predicted integral membrane protein ( 0.3 9.7 1
Calmodulin_bind Calmodulin binding protein-like -0.3 9.9 1
OST3_OST6 OST3 / OST6 family -0.4 9.9 1
PAF-AH_p_II Platelet-activating factor acetylhydr -0.6 9.9 1
DUF1142 Protein of unknown function (DUF1142) -0.8 10 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
HemolysinCabind 1/8 34 44 .. 8 18 .] 3.0 9.6
Glyco_hydro_7 1/1 44 56 .. 430 442 .] -0.6 6.4
PQQ_C 1/1 52 62 .. 12 22 .] 4.3 5.8
HemolysinCabind 2/8 54 66 .. 1 13 [. 6.0 1.2
RtxA 1/47 82 99 .. 1 19 [] 4.8 3
RtxA 2/47 101 119 .. 1 19 [] 8.0 0.36
RtxA 3/47 121 139 .. 1 19 [] 18.5 0.00025
RtxA 4/47 141 159 .. 1 19 [] 20.4 6.8e-05
RtxA 5/47 161 185 .. 1 19 [] 15.0 0.0028
RtxA 6/47 187 205 .. 1 19 [] 18.5 0.00025
Fil_haemagg 1/2 198 271 .. 1 50 [. 3.0 3.8
RtxA 7/47 207 225 .. 1 19 [] 20.1 8.7e-05
AIP3 1/1 221 243 .. 462 484 .] 2.5 1.9
Ocular_alb 1/1 238 251 .. 394 407 .] -1.8 7.2
RtxA 8/47 255 273 .. 1 19 [] 14.9 0.003
Fimbrial 1/2 269 275 .. 1 7 [. 0.6 8.5
DUF2168 1/1 274 283 .. 161 170 .. 1.8 1.5
RtxA 9/47 275 293 .. 1 19 [] 14.3 0.0046
POP1 1/1 294 304 .. 1 11 [. 1.1 6
DUF1345 1/1 296 314 .. 81 99 .. 2.3 1.9
Avian_gp85 1/1 310 320 .. 158 168 .. 0.9 4.1
Fil_haemagg 2/2 353 385 .. 1 29 [. 0.5 21
DUF461 1/2 449 458 .. 102 113 .] 2.1 5.6
DUF116 1/1 453 465 .. 156 168 .] 1.3 6.7
Peptidase_M6 1/1 479 495 .. 687 703 .] 2.4 0.52
EzrA 1/1 491 504 .. 547 560 .] 0.3 5.5
Sec15 1/1 496 509 .. 1 17 [. 0.8 4.1
RtxA 10/47 579 597 .. 1 19 [] 14.7 0.0035
NMDAR2_C 1/1 586 590 .. 863 867 .] -2.3 1.2
Fimbrial 2/2 593 599 .. 1 7 [. 0.1 12
RtxA 11/47 599 617 .. 1 19 [] 21.7 2.8e-05
Lycopene_cycl 1/1 614 627 .. 1 14 [. 2.7 1.2
RtxA 12/47 619 637 .. 1 19 [] 17.9 0.00038
RtxA 13/47 639 657 .. 1 19 [] 16.2 0.0012
PDH 1/1 642 661 .. 259 285 .] 1.9 3
GntP_permease 1/1 645 665 .. 333 353 .. 0.5 4.8
Mu-transpos_C 1/1 645 658 .. 65 81 .] 2.6 6
Cas_TM1812 1/1 646 660 .. 235 249 .] 2.4 2
DUF374 1/1 648 660 .. 20 32 .. 2.3 6.6
W_rich_C 1/2 672 692 .. 1 22 [. 1.2 5.8
Amidohydro_1 1/1 675 697 .. 1 34 [. -0.6 8.1
RtxA 14/47 677 695 .. 1 19 [] 6.3 1.1
RtxA 15/47 696 713 .. 1 19 [] 11.0 0.044
RtxA 16/47 715 732 .. 1 19 [] 9.3 0.14
RtxA 17/47 735 751 .. 2 19 .] 5.6 1.8
Rieske 1/1 737 777 .. 1 46 [. 1.5 8.5
Sec_GG 1/2 757 773 .. 18 34 .] 1.2 19
RtxA 18/47 758 774 .. 2 19 .] 10.7 0.054
DUF1416 1/1 763 786 .. 62 88 .] 3.6 4
Sec_GG 2/2 776 792 .. 18 34 .] 4.0 2.8
RtxA 19/47 777 794 .. 2 19 .] 12.0 0.022
RtxA 20/47 796 812 .. 2 19 .] 14.4 0.0043
RtxA 21/47 814 832 .. 1 19 [] 22.5 1.7e-05
RtxA 22/47 833 851 .. 1 19 [] 12.6 0.015
Hexapep 1/2 840 857 .. 1 18 [] 0.1 82
Spore_III_AE 1/1 848 859 .. 317 328 .] 3.6 1.2
RtxA 23/47 852 870 .. 1 19 [] 8.8 0.2
DUF2149 1/2 871 878 .. 1 8 [. 1.6 8.5
RtxA 24/47 871 889 .. 1 19 [] 19.6 0.00012
DUF2269 1/1 887 893 .. 122 128 .] 0.3 9.7
RtxA 25/47 890 908 .. 1 19 [] 18.3 0.0003
Hydrolase 1/1 899 923 .. 160 184 .] 3.6 1.3
RtxA 26/47 909 927 .. 1 19 [] 10.9 0.046
Adeno_shaft 1/4 910 926 .. 14 30 .] 4.8 3.7
RtxA 27/47 928 946 .. 1 19 [] 14.7 0.0034
DUF1780 1/1 934 961 .. 182 208 .] 0.2 7.6
DUF2149 2/2 947 954 .. 1 8 [. 0.1 22
RtxA 28/47 947 965 .. 1 19 [] 15.4 0.0022
RtxA 29/47 966 984 .. 1 19 [] 16.1 0.0013
RtxA 30/47 986 1003 .. 2 19 .] 11.3 0.036
PhageMin_Tail 1/1 992 1006 .. 211 227 .] 1.2 7.7
RtxA 31/47 1006 1021 .. 3 19 .] 8.7 0.21
ThiS 1/1 1010 1017 .. 84 91 .] 0.4 6.8
Big_2 1/1 1022 1044 .. 68 90 .] 2.3 5.6
RtxA 32/47 1023 1040 .. 1 19 [] 14.7 0.0035
Antimicrobial_1 1/1 1037 1052 .. 1 16 [. 3.0 1.5
RtxA 33/47 1042 1060 .. 1 19 [] 14.4 0.0043
RtxA 34/47 1062 1079 .. 2 19 .] 10.8 0.05
PRF 1/1 1080 1101 .. 146 167 .. -0.7 5.9
RtxA 35/47 1085 1099 .. 5 19 .] 8.4 0.26
ATP-synt_C 1/1 1088 1100 .. 1 13 [. 2.6 7.3
RtxA 36/47 1100 1113 .. 1 14 [. 9.3 0.14
Adeno_shaft 2/4 1105 1117 .. 18 30 .] 3.0 12
RtxA 37/47 1119 1137 .. 1 19 [] 10.4 0.069
RtxA 38/47 1138 1156 .. 1 19 [] 19.6 0.00012
RtxA 39/47 1159 1171 .. 3 16 .. 1.7 27
Glyco_hydro_16 1/1 1169 1194 .. 1 30 [. 2.4 2.6
RtxA 40/47 1176 1194 .. 1 19 [] 18.9 0.0002
PCMT 1/1 1181 1191 .. 144 154 .. 2.3 2.4
RtxA 41/47 1195 1213 .. 1 19 [] 9.5 0.12
RtxA 42/47 1215 1232 .. 2 19 .] 9.9 0.094
Ribosomal_S4e 1/2 1223 1238 .. 70 85 .] 0.6 19
RtxA 43/47 1233 1251 .. 1 19 [] 8.5 0.25
FliT 1/1 1248 1256 .. 101 109 .] 1.3 9.4
Calmodulin_bind 1/1 1249 1271 .. 294 316 .] -0.3 9.9
RtxA 44/47 1252 1270 .. 1 19 [] 12.6 0.015
Hexapep 2/2 1259 1269 .. 1 11 [. 3.3 9.8
RtxA 45/47 1271 1289 .. 1 19 [] 18.3 0.00029
Adeno_shaft 3/4 1276 1288 .. 18 30 .] 4.1 5.8
RtxA 46/47 1290 1308 .. 1 19 [] 12.1 0.021
EKR 1/1 1307 1317 .. 37 47 .] 1.9 6.7
Flp_Fap 1/1 1328 1351 .. 26 50 .] 4.4 3.6
Tubulin 1/1 1345 1364 .. 1 20 [. 0.5 6.4
Phyto_Pns9_10 1/1 1399 1412 .. 309 322 .] -0.2 6.5
CBM_4_9 1/1 1435 1506 .. 1 76 [. 14.9 0.00087
DUF461 2/2 1495 1516 .. 90 113 .] 5.5 0.57
DUF1105 1/1 1535 1550 .. 179 194 .] 0.8 6.7
DUF669 1/1 1557 1586 .. 124 153 .] 3.6 2
5HT_transporter 1/1 1568 1586 .. 1 22 [. 2.2 6
DUF2271 1/1 1574 1590 .. 138 154 .] 1.8 4.2
CBP4 1/1 1584 1615 .. 105 139 .] 2.0 4.4
BH4 1/1 1636 1648 .. 15 27 .] 3.6 5
Cortex-I_coil 1/1 1643 1673 .. 1 31 [. 6.0 0.5
M 1/2 1644 1664 .. 1 21 [] 1.1 54
DMPK_coil 1/1 1650 1673 .. 38 61 .] 7.7 0.2
Polyketide_cyc2 1/1 1654 1668 .. 127 141 .] 2.6 4.7
SlyX 1/1 1656 1679 .. 37 61 .. 0.9 1.7
DUF1702 1/1 1669 1694 .. 301 326 .] 1.8 1.7
M 2/2 1720 1740 .. 1 21 [] 7.5 1.1
Tir_receptor_M 1/1 1782 1796 .. 52 66 .] 1.0 8.7
RTX 1/1 1799 1839 .. 1 36 [. -0.5 2.7
SelB-wing_1 1/1 1818 1847 .. 34 61 .] 1.9 4.9
Baculo_LEF-10 1/1 1833 1856 .. 49 73 .] 2.7 2.2
Cm_res_leader 1/2 1871 1886 .. 1 17 [] 3.4 8.2
nsp9 1/1 1875 1884 .. 103 112 .] 1.1 1.7
Tyr-DNA_phospho 1/1 2056 2079 .. 113 136 .. 0.2 5.1
DUF1142 1/1 2078 2089 .. 493 504 .] -0.8 10
Lipoprotein_3 1/1 2112 2122 .. 91 101 .. 2.1 5.3
DUF2288 1/1 2134 2151 .. 1 18 [. 1.6 8.3
DUF1819 1/1 2139 2159 .. 25 45 .. 1.0 6.4
DUF2414 1/1 2145 2162 .. 60 77 .] 3.1 4.2
Glyco_hydro_26 1/1 2153 2169 .. 7 23 .. 4.0 0.54
OST3_OST6 1/1 2159 2180 .. 338 359 .] -0.4 9.9
DUF2231 1/1 2170 2179 .. 108 117 .] 1.5 6.7
zf-CHC2 1/2 2171 2185 .. 84 98 .] 7.6 0.19
Pro_racemase 1/1 2180 2191 .. 327 338 .] 1.1 3
PAF-AH_p_II 1/1 2181 2194 .. 434 447 .] -0.6 9.9
DUF2387 1/1 2284 2311 .. 47 72 .] 1.4 9
Corona_NS2 1/1 2317 2345 .. 81 109 .] 7.8 0.18
DUF1086 1/1 2359 2371 .. 156 168 .] 0.3 9.2
RGP 1/1 2371 2385 .. 336 350 .] -1.4 8.6
Cu_amine_oxidN2 1/1 2414 2423 .. 1 10 [. 3.9 2.3
Transposase_30 1/1 2436 2466 .. 223 254 .] 0.3 5.7
Abhydrolase_1 1/1 2514 2571 .. 1 62 [. 14.8 0.00076
Abhydrolase_3 1/1 2537 2589 .. 50 128 .. 8.5 0.057
OmpA 1/1 2545 2570 .. 65 90 .. 6.0 0.61
SIP 1/1 2545 2563 .. 105 123 .. 1.8 5.4
Thioesterase 1/1 2562 2589 .. 78 108 .. 1.3 4.9
DUF2159 1/1 2676 2693 .. 113 130 .] 2.7 3.1
DUF2342 1/1 2697 2709 .. 356 368 .] 0.0 8.8
RMF 1/1 2741 2753 .. 12 24 .. 4.3 1.7
UPF0556 1/1 2846 2860 .. 156 170 .] 4.8 0.38
CysG_dimeriser 1/1 2855 2878 .. 41 64 .] 3.5 3.5
TrbI_Ftype 1/1 2859 2869 .. 101 111 .] 1.6 9.3
DUF72 1/1 2862 2872 .. 273 283 .] 0.9 8.2
Fibrillarin_2 1/1 2862 2879 .. 509 528 .] -0.5 4.7
Terminase_GpA 1/1 2875 2890 .. 652 667 .] -1.3 7.9
Peptidase_C58 1/1 2960 3002 .. 200 240 .. 12.2 0.0054
DUF2002 1/1 2988 3008 .. 96 116 .] 4.7 0.46
Cm_res_leader 2/2 3065 3080 .. 1 17 [] 0.7 48
MRP-L47 1/1 3071 3077 .. 93 99 .] 1.3 6.2
UBA 1/1 3105 3133 .. 1 28 [. 2.9 7.6
Prefoldin 1/1 3163 3184 .. 1 22 [. 2.8 4.6
DUF2514 1/1 3169 3193 .. 100 132 .. 4.8 0.47
Pou 1/1 3248 3256 .. 70 78 .] 1.7 7.6
Phage_lysis 1/1 3347 3357 .. 58 68 .. 0.3 9.4
ABC_tran 1/1 3398 3431 .. 164 198 .. 0.5 8.1
CorC_HlyC 1/1 3398 3423 .. 56 81 .] 4.2 2.1
AlaDh_PNT_N 1/1 3407 3423 .. 107 123 .. 5.0 0.22
UPF0203 1/1 3411 3430 .. 56 76 .] 7.1 0.17
Ins134_P3_kin 1/1 3458 3475 .. 25 42 .. 4.4 0.25
FAD_binding_5 1/1 3473 3492 .. 17 37 .. 1.7 4.5
YjeF_N 1/1 3484 3516 .. 1 34 [. 3.8 0.84
OpcA_G6PD_assem 1/1 3628 3643 .. 1 16 [. 0.8 5.6
Ribosomal_S4e 2/2 3646 3657 .. 1 12 [. 1.8 8.2
Glyco_hydro_14 1/1 3677 3687 .. 424 434 .] 0.0 8.8
Host_attach 1/1 3684 3696 .. 129 141 .] 1.6 7.3
Dor1 1/1 3688 3704 .. 205 221 .. -0.1 7.3
Flavodoxin_2 1/1 3688 3708 .. 207 227 .] 1.4 4.6
Bcl-2 1/1 3696 3706 .. 1 11 [. 1.2 1.6
Herpes_BFRF1 1/1 3760 3785 .. 197 222 .] 0.7 6.3
zf-U1 1/1 3761 3773 .. 26 38 .] 2.3 7.8
GSDH 1/1 3782 3800 .. 92 108 .] 2.1 4.6
EXOSC1 1/1 3804 3813 .. 1 12 [. 1.8 5.4
OB_RNB 1/1 3806 3827 .. 36 60 .] 4.2 2.4
Adeno_shaft 4/4 3854 3864 .. 1 11 [. 0.2 70
DGOK 1/1 3870 3876 .. 1 7 [. -1.6 7.5
RtxA 47/47 3889 3906 .. 1 19 [] 6.7 0.87
DUF2134 1/1 4042 4092 .. 1 55 [. 1.7 6.1
ACC_central 1/1 4044 4053 .. 782 791 .] -1.8 8.4
GET2 1/1 4104 4110 .. 324 330 .] -0.8 9.2
Cupin_1 1/1 4105 4137 .. 1 38 [. 3.4 1.8
W_rich_C 2/2 4145 4159 .. 1 15 [. 0.2 12
zf-CHC2 2/2 4150 4163 .. 85 98 .] 0.2 25
RHS_repeat 1/1 4158 4171 .. 1 17 [. 3.2 4.7
DUF244 1/1 4282 4307 .. 1 29 [. 1.3 5.5
XLF 1/1 4287 4316 .. 162 207 .] 2.9 2.2
TIMP 1/1 4314 4333 .. 96 115 .. 0.3 1.8
HemolysinCabind 3/8 4351 4368 .. 1 18 [] 6.1 1.1
PalH 1/1 4355 4366 .. 420 431 .] 0.9 3.2
HemolysinCabind 4/8 4369 4376 .. 1 8 [. 1.0 40
HemolysinCabind 5/8 4387 4394 .. 1 8 [. 2.2 17
SpoIIE 1/1 4388 4402 .. 190 204 .] 5.6 0.2
HemolysinCabind 6/8 4423 4431 .. 1 9 [. 1.5 27
TIP41 1/1 4468 4483 .. 1 16 [. 3.5 1.9
HemolysinCabind 7/8 4493 4503 .. 8 18 .] 6.7 0.75
DUF1008 1/1 4502 4515 .. 129 142 .] 7.8 0.14
HemolysinCabind 8/8 4514 4523 .. 9 18 .] 5.4 1.8
DUF1683 1/1 4539 4547 .. 88 96 .] 1.0 9.4
malic 1/1 4557 4565 .. 185 195 .] -0.9 9.1
RTX_C 1/1 4562 4580 .. 1 19 [. 3.3 1.9
PI3K_C2 1/1 4578 4605 .. 152 180 .] 1.5 6.5
HTH_6 1/1 4656 4672 .. 1 17 [. 1.1 9.6
RNA_ligase 1/1 4666 4678 .. 431 443 .] 3.3 1
Alignments of top-scoring domains:
HemolysinCabind: domain 1 of 8, from 34 to 44: score 3.0, E = 9.6
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
+++ +G+Dt+
gi|1176187 34 VIHAYGGDDTI 44
Glyco_hydro_7: domain 1 of 1, from 44 to 56: score -0.6, E = 6.4
CS EEEECTTSSTTS-
*->IKfGpIGssTfsg<-*
I+ G IG + ++g
gi|1176187 44 IRVGSIGATVYTG 56
PQQ_C: domain 1 of 1, from 52 to 62: score 4.3, E = 5.8
*->lvYvgtGNpsP<-*
+vY gtGN s+
gi|1176187 52 TVYTGTGNDSV 62
HemolysinCabind: domain 2 of 8, from 54 to 66: score 6.0, E = 1.2
CS E--SSS-EEEEES
*->yGGaGnDtLyGga<-*
y G GnD+ yGga
gi|1176187 54 YTGTGNDSVYGGA 66
RtxA: domain 1 of 47, from 82 to 99: score 4.8, E = 3
*->GaGgaNvitkvGdggdlaf<-*
Ga+g++ i k+ +g+++f
gi|1176187 82 GAAGYADISKSQ-SGNVHF 99
RtxA: domain 2 of 47, from 101 to 119: score 8.0, E = 0.36
*->GaGgaNvitkvGdggdlaf<-*
Ga ga +i++ G++gd+ +
gi|1176187 101 GASGATNIDHQGRDGDIRY 119
RtxA: domain 3 of 47, from 121 to 139: score 18.5, E = 0.00025
*->GaGgaNvitkvGdggdlaf<-*
Ga+ aN +t++G +g+++f
gi|1176187 121 GAALANFLTRKGISGNVSF 139
RtxA: domain 4 of 47, from 141 to 159: score 20.4, E = 6.8e-05
*->GaGgaNvitkvGdggdlaf<-*
GaGg+N++++ d+gdl++
gi|1176187 141 GAGGYNKLWHQTDRGDLSY 159
RtxA: domain 5 of 47, from 161 to 185: score 15.0, E = 0.0028
*->GaGgaNvitkv......Gdggdlaf<-*
GaG+aN+++++ +++ +G++g+++f
gi|1176187 161 GAGAANKLDRTwhsqyqGSQGNIHF 185
RtxA: domain 6 of 47, from 187 to 205: score 18.5, E = 0.00025
*->GaGgaNvitkvGdggdlaf<-*
GaG+aN+i + +++g++++
gi|1176187 187 GAGAANIISSQVESGNVTL 205
Fil_haemagg: domain 1 of 2, from 198 to 271: score 3.0, E = 3.8
CS EEESSEEEETT TT--EE-SEEEE
*->vaaGaltlnaa........................alggldlnnggt
v +G++tln a+ ++ ++++ ++ + ++ ++ + l+ l + ++
gi|1176187 198 VESGNVTLNGAgaynkvfrkgregdvnfngaggwnELSRLRNEQDEY 244
CS EE-STT-EEEE-S-EEESSE.......
lsagggltltaagllnnggtliaggdl<-*
l+++g++ ++ag n+ + a g++
gi|1176187 245 LQTRGDIRFNGAGGYNRLLSDVAEGNI 271
RtxA: domain 7 of 47, from 207 to 225: score 20.1, E = 8.7e-05
*->GaGgaNvitkvGdggdlaf<-*
GaG++N++ ++G++gd++f
gi|1176187 207 GAGAYNKVFRKGREGDVNF 225
AIP3: domain 1 of 1, from 221 to 243: score 2.5, E = 1.9
*->engKLKKSGGvEEvERiRkakDe<-*
++ +++ +GG E R+R ++De
gi|1176187 221 GDVNFNGAGGWNELSRLRNEQDE 243
Ocular_alb: domain 1 of 1, from 238 to 251: score -1.8, E = 7.2
*->kkEvDsilqaqGeL<-*
++E D lq++G++
gi|1176187 238 RNEQDEYLQTRGDI 251
RtxA: domain 8 of 47, from 255 to 273: score 14.9, E = 0.003
*->GaGgaNvitkvGdggdlaf<-*
GaGg+N + + +++g+++f
gi|1176187 255 GAGGYNRLLSDVAEGNIHF 273
Fimbrial: domain 1 of 2, from 269 to 275: score 0.6, E = 8.5
*->GtvtFkG<-*
G+++FkG
gi|1176187 269 GNIHFKG 275
DUF2168: domain 1 of 1, from 274 to 283: score 1.8, E = 1.5
*->rGpgdYNHLS<-*
+G+g+YNHLS
gi|1176187 274 KGAGGYNHLS 283
RtxA: domain 9 of 47, from 275 to 293: score 14.3, E = 0.0046
*->GaGgaNvitkvGdggdlaf<-*
GaGg+N++ ++G++ d++
gi|1176187 275 GAGGYNHLSRKGADSDSSP 293
POP1: domain 1 of 1, from 294 to 304: score 1.1, E = 6
*->FaeaRakeiel<-*
Fa aRa ei+l
gi|1176187 294 FAGARADEIAL 304
DUF1345: domain 1 of 1, from 296 to 314: score 2.3, E = 1.9
*->sagalhlalaglTvalSWl<-*
+a+a ++al+ +T+ +SW+
gi|1176187 296 GARADEIALTTATMGGSWI 314
Avian_gp85: domain 1 of 1, from 310 to 320: score 0.9, E = 4.1
*->GGkWvNqskef<-*
GG W+Nqs+++
gi|1176187 310 GGSWINQSQPV 320
Fil_haemagg: domain 2 of 2, from 353 to 385: score 0.5, E = 21
CS EEESSEEEETT TT--EE-SEEEEEE-STT
*->vaaGaltlnaa....alggldlnnggtlsaggg<-*
a Gal+++a++ + ++ ld +g++++ag+g
gi|1176187 353 GANGALRYHATswykEGNHLDGLAGRQIDAGNG 385
DUF461: domain 1 of 2, from 449 to 458: score 2.1, E = 5.6
CS -TTT..---EEE
*->FedgGrgtveve<-*
Fedg ++v+v+
gi|1176187 449 FEDG--TKVDVN 458
DUF116: domain 1 of 1, from 453 to 465: score 1.3, E = 6.7
*->TlVDveeveealk<-*
T+VDv++v+ +
gi|1176187 453 TKVDVNAVKSRAQ 465
Peptidase_M6: domain 1 of 1, from 479 to 495: score 2.4, E = 0.52
*->LKikvlgQAkdgSagav<-*
+Ki v++ A+d ++ga+
gi|1176187 479 TKIVVVELANDRETGAL 495
EzrA: domain 1 of 1, from 491 to 504: score 0.3, E = 5.5
*->EPGaykRIedsYyk<-*
E Ga+k + +++yk
gi|1176187 491 ETGALKYLAKAWYK 504
Sec15: domain 1 of 1, from 496 to 509: score 0.8, E = 4.1
CS HHHHHHTT........S
*->eYekvIkkCWmKEGEHF<-*
k+++k W KEG H+
gi|1176187 496 ---KYLAKAWYKEGNHL 509
RtxA: domain 10 of 47, from 579 to 597: score 14.7, E = 0.0035
*->GaGgaNvitkvGdggdlaf<-*
GaGg+Nvi + +++g+++f
gi|1176187 579 GAGGGNVIESDVTEGNIHF 597
NMDAR2_C: domain 1 of 1, from 586 to 590: score -2.3, E = 1.2
*->IESDV<-*
IESDV
gi|1176187 586 IESDV 590
Fimbrial: domain 2 of 2, from 593 to 599: score 0.1, E = 12
*->GtvtFkG<-*
G+++F+G
gi|1176187 593 GNIHFNG 599
RtxA: domain 11 of 47, from 599 to 617: score 21.7, E = 2.8e-05
*->GaGgaNvitkvGdggdlaf<-*
GaG+aNv+ k+G++gdl f
gi|1176187 599 GAGAANVLIKRGQRGDLVF 617
Lycopene_cycl: domain 1 of 1, from 614 to 627: score 2.7, E = 1.2
*->DlvivGaGlAGlll<-*
Dlv+ GaGlA+ l+
gi|1176187 614 DLVFRGAGLANVLV 627
RtxA: domain 12 of 47, from 619 to 637: score 17.9, E = 0.00038
*->GaGgaNvitkvGdggdlaf<-*
GaG aNv+++ G++g +++
gi|1176187 619 GAGLANVLVHQGAQGRMDV 637
RtxA: domain 13 of 47, from 639 to 657: score 16.2, E = 0.0012
*->GaGgaNvitkvGdggdlaf<-*
+aG+aNv++++Gdg +la
gi|1176187 639 AAGAANVLVRSGDGEYLAR 657
PDH: domain 1 of 1, from 642 to 661: score 1.9, E = 3
*->klaelirDAARngDeeGPveLvellke<-*
+++ l+r +gD+e +L++ll+
gi|1176187 642 AANVLVR----SGDGE---YLARLLAY 661
GntP_permease: domain 1 of 1, from 645 to 665: score 0.5, E = 4.8
*->VLvdSGVGdylAellsgmniS<-*
VLv+SG G ylA ll+ +niS
gi|1176187 645 VLVRSGDGEYLARLLAYGNIS 665
Mu-transpos_C: domain 1 of 1, from 645 to 658: score 2.6, E = 6
*->VlVyrqdGNeerflceA<-*
VlV+++dG e +l++
gi|1176187 645 VLVRSGDG--E-YLARL 658
Cas_TM1812: domain 1 of 1, from 646 to 660: score 2.4, E = 2
*->FlntGdarplasLlk<-*
++ +Gd+++la+Ll
gi|1176187 646 LVRSGDGEYLARLLA 660
DUF374: domain 1 of 1, from 648 to 660: score 2.3, E = 6.6
*->rSrDGEiiArvle<-*
rS DGE++Ar+l+
gi|1176187 648 RSGDGEYLARLLA 660
W_rich_C: domain 1 of 2, from 672 to 692: score 1.2, E = 5.8
*->gstgllegifGyyyVqtgDglt<-*
+s ++++g+ ++ + q+gDg +
gi|1176187 672 DSQVVMLGG-YNTHTQLGDGHG 692
Amidohydro_1: domain 1 of 1, from 675 to 697: score -0.6, E = 8.1
CS EEEE-EEEEEEEECTTTHH...............
*->ivlPGlIDaHvHleqsllrGgsaddlpLldWLnk<-*
+v+ G+ ++H+ l ++++ WL +
gi|1176187 675 VVMLGGYNTHTQLGDGHGL-----------WLAG 697
RtxA: domain 14 of 47, from 677 to 695: score 6.3, E = 1.1
*->GaGgaNvitkvGdggdlaf<-*
++Gg+N t+ Gdg+ l +
gi|1176187 677 MLGGYNTHTQLGDGHGLWL 695
RtxA: domain 15 of 47, from 696 to 713: score 11.0, E = 0.044
*->GaGgaNvitkvGdggdlaf<-*
++Gg N +t+vG +g l++
gi|1176187 696 AGGGFNLLTQVG-NGRLDA 713
RtxA: domain 16 of 47, from 715 to 732: score 9.3, E = 0.14
*->GaGgaNvitkvGdggdlaf<-*
GgaNv+tk G g l++
gi|1176187 715 SVGGANVLTKLG-AGQLTA 732
RtxA: domain 17 of 47, from 735 to 751: score 5.6, E = 1.8
*->aGgaNvitkvGdggdlaf<-*
+GgaNv+t+v +g+ a+
gi|1176187 735 LGGANVLTHVT-QGEEAA 751
Rieske: domain 1 of 1, from 737 to 777: score 1.5, E = 8.5
CS EECCEECCCSCCT.ECTEEEEEECTGGEEEEEECCTTTTEEEEEES
*->vWvpvcheselpealapgdfktvdlnGedlvvvrrdedGevrAfsn<
++ h+++ +e + d ++v l G+ v+ ++G+v A+++
gi|1176187 737 GANVLTHVTQGEE---AADTRAVLL-GGANVLTK-KGNGKVQAILG 777
CS
-*
gi|1176187 - -
Sec_GG: domain 1 of 2, from 757 to 773: score 1.2, E = 19
*->lkGGtrillkvdksvtq<-*
l GG+++l+k + ++q
gi|1176187 757 LLGGANVLTKKGNGKVQ 773
RtxA: domain 18 of 47, from 758 to 774: score 10.7, E = 0.054
*->aGgaNvitkvGdggdlaf<-*
+GgaNv+tk+G +g + +
gi|1176187 758 LGGANVLTKKG-NGKVQA 774
DUF1416: domain 1 of 1, from 763 to 786: score 3.6, E = 4
*->ALvpggtgadrtVtAevGgiheVdvaV<-*
+L ++g+g +V+A +Gg ++V +++
gi|1176187 763 VLTKKGNG---KVQAILGGGANVLTQI 786
Sec_GG: domain 2 of 2, from 776 to 792: score 4.0, E = 2.8
*->lkGGtrillkvdksvtq<-*
l GG+++l+++ + +tq
gi|1176187 776 LGGGANVLTQIGQGDTQ 792
RtxA: domain 19 of 47, from 777 to 794: score 12.0, E = 0.022
*->aGgaNvitkvGdggdlaf<-*
+GgaNv+t++G+g ++a+
gi|1176187 777 GGGANVLTQIGQGDTQAL 794
RtxA: domain 20 of 47, from 796 to 812: score 14.4, E = 0.0043
*->aGgaNvitkvGdggdlaf<-*
+G+aNv+t+vG +gdl++
gi|1176187 796 LGAANVLTRVG-DGDLSA 812
RtxA: domain 21 of 47, from 814 to 832: score 22.5, E = 1.7e-05
*->GaGgaNvitkvGdggdlaf<-*
++GgaNv+t+vG+g +l +
gi|1176187 814 MLGGANVLTHVGNGDTLGV 832
RtxA: domain 22 of 47, from 833 to 851: score 12.6, E = 0.015
*->GaGgaNvitkvGdggdlaf<-*
+++++N tkvGdg +a+
gi|1176187 833 MGAAGNLFTKVGDGTAIAA 851
Hexapep: domain 1 of 2, from 840 to 857: score 0.1, E = 82
CS TEEECTTEEEETTEEEET
*->gviIGdnvvIgpgvvIgd<-*
+++Gd++ I + g+
gi|1176187 840 FTKVGDGTAIAAMIGAGN 857
Spore_III_AE: domain 1 of 1, from 848 to 859: score 3.6, E = 1.2
*->aItIivgaGNit<-*
aI+ ++gaGN+
gi|1176187 848 AIAAMIGAGNLF 859
RtxA: domain 23 of 47, from 852 to 870: score 8.8, E = 0.2
*->GaGgaNvitkvGdggdlaf<-*
++G++N t++G+g a+
gi|1176187 852 MIGAGNLFTQIGQGDAWAL 870
DUF2149: domain 1 of 2, from 871 to 878: score 1.6, E = 8.5
*->msgVANLf<-*
m gVAN+f
gi|1176187 871 MGGVANIF 878
RtxA: domain 24 of 47, from 871 to 889: score 19.6, E = 0.00012
*->GaGgaNvitkvGdggdlaf<-*
++G+aN+ tkvGdg+ la+
gi|1176187 871 MGGVANIFTKVGDGNALAL 889
DUF2269: domain 1 of 1, from 887 to 893: score 0.3, E = 9.7
*->fwLMVaK<-*
++LMVaK
gi|1176187 887 LALMVAK 893
RtxA: domain 25 of 47, from 890 to 908: score 18.3, E = 0.0003
*->GaGgaNvitkvGdggdlaf<-*
+ ++aNv t++Gdg ++a+
gi|1176187 890 MVAKANVFTHIGDGLTVAL 908
Hydrolase: domain 1 of 1, from 899 to 923: score 3.6, E = 1.3
CS EEESSCHHHHHHHHCTEEEEEESSH
*->mVGDgvnDapalaaAGvgvamgngg<-*
++GDg+ a +la+ ++++ gng
gi|1176187 899 HIGDGLTVALMLAQGNLATKVGNGM 923
RtxA: domain 26 of 47, from 909 to 927: score 10.9, E = 0.046
*->GaGgaNvitkvGdggdlaf<-*
+++++N tkvG+g +la+
gi|1176187 909 MLAQGNLATKVGNGMTLAA 927
Adeno_shaft: domain 1 of 4, from 910 to 926: score 4.8, E = 3.7
CS E-TS-EEE-B-TTEEEE
*->vtnnaLalklGagLtvd<-*
+ +++La+k+G+g+t+
gi|1176187 910 LAQGNLATKVGNGMTLA 926
RtxA: domain 27 of 47, from 928 to 946: score 14.7, E = 0.0034
*->GaGgaNvitkvGdggdlaf<-*
+ G aNv t+vG+g + a+
gi|1176187 928 MVGNANVFTHVGAGETFAA 946
DUF1780: domain 1 of 1, from 934 to 961: score 0.2, E = 7.6
CS EEE-TTS-HHHHTTTTEEEEE -TTT--
*->LFAHsdAPEFLRanLGRsiLF.DvGvsL<-*
+F H +A E a LG + LF+ vG +L
gi|1176187 934 VFTHVGAGETFAAMLGQANLFtKVGDGL 961
DUF2149: domain 2 of 2, from 947 to 954: score 0.1, E = 22
*->msgVANLf<-*
m+g ANLf
gi|1176187 947 MLGQANLF 954
RtxA: domain 28 of 47, from 947 to 965: score 15.4, E = 0.0022
*->GaGgaNvitkvGdggdlaf<-*
++G+aN tkvGdg + a+
gi|1176187 947 MLGQANLFTKVGDGLTAAL 965
RtxA: domain 29 of 47, from 966 to 984: score 16.1, E = 0.0013
*->GaGgaNvitkvGdggdlaf<-*
++G+aNv ++G+g +l +
gi|1176187 966 MIGKANVYSHIGNGTSLGL 984
RtxA: domain 30 of 47, from 986 to 1003: score 11.3, E = 0.036
*->aGgaNvitkvGdggdlaf<-*
aG+ Nv+tkvG+g +la+
gi|1176187 986 AGELNVMTKVGNGTTLAA 1003
PhageMin_Tail: domain 1 of 1, from 992 to 1006: score 1.2, E = 7.7
*->ltkddaqkaaalktlFG<-*
+t +++ +++l++lFG
gi|1176187 992 MT--KVGNGTTLAALFG 1006
RtxA: domain 31 of 47, from 1006 to 1021: score 8.7, E = 0.21
*->GgaNvitkvGdggdlaf<-*
G+aN++t+vG gg + +
gi|1176187 1006 GKANIVTHVG-GGLTGV 1021
ThiS: domain 1 of 1, from 1010 to 1017: score 0.4, E = 6.8
CS EEEE----
*->iiPpVgGG<-*
i++ VgGG
gi|1176187 1010 IVTHVGGG 1017
Big_2: domain 1 of 1, from 1022 to 1044: score 2.3, E = 5.6
CS -SSS-EEEEEEETT.TEEEEEEE
*->lakGtatItatsgdgnksasvtv<-*
la G+a+I ++gd +a ++
gi|1176187 1022 LALGKANIITKVGDDFLGAIAKA 1044
RtxA: domain 32 of 47, from 1023 to 1040: score 14.7, E = 0.0035
*->GaGgaNvitkvGdggdlaf<-*
++G+aN+itkvG + l +
gi|1176187 1023 ALGKANIITKVG-DDFLGA 1040
Antimicrobial_1: domain 1 of 1, from 1037 to 1052: score 3.0, E = 1.5
*->FLPllagvAAkvlPki<-*
FL+++a+ A+vl ++
gi|1176187 1037 FLGAIAKADANVLTHV 1052
RtxA: domain 33 of 47, from 1042 to 1060: score 14.4, E = 0.0043
*->GaGgaNvitkvGdggdlaf<-*
+++ aNv+t+vG+g + +
gi|1176187 1042 AKADANVLTHVGNGTTAGV 1060
RtxA: domain 34 of 47, from 1062 to 1079: score 10.8, E = 0.05
*->aGgaNvitkvGdggdlaf<-*
+G++N +tk+Gdg ++ +
gi|1176187 1062 WGKGNLLTKIGDGTTVGL 1079
PRF: domain 1 of 1, from 1080 to 1101: score -0.7, E = 5.9
*->LisKisDimtqmGmsvtitLPK<-*
Lis + +mt +G ti L K
gi|1176187 1080 LISEVGNVMTHVGAGSTIGLAK 1101
RtxA: domain 35 of 47, from 1085 to 1099: score 8.4, E = 0.26
*->aNvitkvGdggdlaf<-*
+Nv+t+vG+g ++ +
gi|1176187 1085 GNVMTHVGAGSTIGL 1099
ATP-synt_C: domain 1 of 1, from 1088 to 1100: score 2.6, E = 7.3
CS HHHHHHHHHHHHH
*->aavIGAGlAigla<-*
+++ GAG +igla
gi|1176187 1088 MTHVGAGSTIGLA 1100
RtxA: domain 36 of 47, from 1100 to 1113: score 9.3, E = 0.14
*->GaGgaNvitkvGdg<-*
++G aN itkvGdg
gi|1176187 1100 AKGRANLITKVGDG 1113
Adeno_shaft: domain 2 of 4, from 1105 to 1117: score 3.0, E = 12
CS -EEE-B-TTEEEE
*->aLalklGagLtvd<-*
+L +k+G+gL v+
gi|1176187 1105 NLITKVGDGLVVQ 1117
RtxA: domain 37 of 47, from 1119 to 1137: score 10.4, E = 0.069
*->GaGgaNvitkvGdggdlaf<-*
++G N +t+vG+g +f
gi|1176187 1119 AWGDVNLLTQVGNGDRYSF 1137
RtxA: domain 38 of 47, from 1138 to 1156: score 19.6, E = 0.00012
*->GaGgaNvitkvGdggdlaf<-*
++G aNv+tkvGdg ++a+
gi|1176187 1138 AKGRANVLTKVGDGREVAV 1156
RtxA: domain 39 of 47, from 1159 to 1171: score 1.7, E = 27
*->GgaNvitkvGdggd<-*
G+aN +t+vG +gd
gi|1176187 1159 GEANLVTQVG-NGD 1171
Glyco_hydro_16: domain 1 of 1, from 1169 to 1194: score 2.4, E = 2.6
CS SBTTBTTEE-GGGEEEE...TT...SEEEE
*->fgedfdvtwgggnvsvsedpndadGggLtL<-*
+g++++ wg+ nv + dG+ ++L
gi|1176187 1169 NGDGYTGAWGKANVITK---VG-DGRQVVL 1194
RtxA: domain 40 of 47, from 1176 to 1194: score 18.9, E = 0.0002
*->GaGgaNvitkvGdggdlaf<-*
++G+aNvitkvGdg + +
gi|1176187 1176 AWGKANVITKVGDGRQVVL 1194
PCMT: domain 1 of 1, from 1181 to 1191: score 2.3, E = 2.4
CS SEEEEES-GGG
*->nVivvvGDGrq<-*
nVi++vGDGrq
gi|1176187 1181 NVITKVGDGRQ 1191
RtxA: domain 41 of 47, from 1195 to 1213: score 9.5, E = 0.12
*->GaGgaNvitkvGdggdlaf<-*
++G aN++t+vG+g +
gi|1176187 1195 AKGDANIVTQVGEGDGYQA 1213
RtxA: domain 42 of 47, from 1215 to 1232: score 9.9, E = 0.094
*->aGgaNvitkvGdggdlaf<-*
+G+aN++t+vGdg +++
gi|1176187 1215 LGKANIVTRVGDGIQVTL 1232
Ribosomal_S4e: domain 1 of 2, from 1223 to 1238: score 0.6, E = 19
*->kvgDsilislpeqeIv<-*
+vgD i++ l+ +e+
gi|1176187 1223 RVGDGIQVTLAKGEVN 1238
RtxA: domain 43 of 47, from 1233 to 1251: score 8.5, E = 0.25
*->GaGgaNvitkvGdggdlaf<-*
++G+ N t vGdg ++++
gi|1176187 1233 AKGEVNQTTTVGDGLSVTA 1251
FliT: domain 1 of 1, from 1248 to 1256: score 1.3, E = 9.4
*->svnnTYGqf<-*
sv ++YG+f
gi|1176187 1248 SVTAAYGKF 1256
Calmodulin_bind: domain 1 of 1, from 1249 to 1271: score -0.3, E = 9.9
*->vedAYqkwneleeygceildhvk<-*
v +AY k+n+ +++g+ + +++
gi|1176187 1249 VTAAYGKFNNNVKVGDGTTINLA 1271
RtxA: domain 44 of 47, from 1252 to 1270: score 12.6, E = 0.015
*->GaGgaNvitkvGdggdlaf<-*
+ G+ N+ +kvGdg ++++
gi|1176187 1252 AYGKFNNNVKVGDGTTINL 1270
Hexapep: domain 2 of 2, from 1259 to 1269: score 3.3, E = 9.8
CS TEEECTTEEEE
*->gviIGdnvvIg<-*
+v++Gd+++I+
gi|1176187 1259 NVKVGDGTTIN 1269
RtxA: domain 45 of 47, from 1271 to 1289: score 18.3, E = 0.00029
*->GaGgaNvitkvGdggdlaf<-*
++G +N tkvGdg ++a+
gi|1176187 1271 AWGDYNLNTKVGDGLNVAV 1289
Adeno_shaft: domain 3 of 4, from 1276 to 1288: score 4.1, E = 5.8
CS -EEE-B-TTEEEE
*->aLalklGagLtvd<-*
+L++k+G+gL+v
gi|1176187 1276 NLNTKVGDGLNVA 1288
RtxA: domain 46 of 47, from 1290 to 1308: score 12.1, E = 0.021
*->GaGgaNvitkvGdggdlaf<-*
++G++N +++Gdg d+++
gi|1176187 1290 MKGKGNANVQIGDGLDITA 1308
EKR: domain 1 of 1, from 1307 to 1317: score 1.9, E = 6.7
CS GGGGT-----S
*->TaaYEKRgIAv<-*
TaaY ++A+
gi|1176187 1307 TAAYARHNVAI 1317
Flp_Fap: domain 1 of 1, from 1328 to 1351: score 4.4, E = 3.6
*->AVayvttlgitaLktkFtkigtalt<-*
A+a ++t++ ++L t+F +i +l
gi|1176187 1328 AIASSNTSS-NKLGTLFDNIKQTLL 1351
Tubulin: domain 1 of 1, from 1345 to 1364: score 0.5, E = 6.4
CS -EEEEEEHHHHHHHHHHHHH
*->eIiviGVGGaGnnignrlwe<-*
+I++ +G aGn+++n+l++
gi|1176187 1345 NIKQTLLGSAGNQAINYLVQ 1364
Phyto_Pns9_10: domain 1 of 1, from 1399 to 1412: score -0.2, E = 6.5
*->SklvSLsgddaarG<-*
S+++SL g ++ G
gi|1176187 1399 SLAGSLTGKVSQAG 1412
CBM_4_9: domain 1 of 1, from 1435 to 1506: score 14.9, E = 0.00087
*->gnlikngtFEdpgglsgWkarggstvkatvdvtyskayeGtyslkvs
nli+ng+FE g +gW+ g + + +d + ty+l +
gi|1176187 1435 ENLIVNGDFER--GAQGWQHAGAG---IEADFS-----AATYGLAAD 1471
grtan......twdgaiidvtirlekGktYtvSfw<-*
g +a+ ++ ++ ++ +i ++ +l+ G+t ++ f+
gi|1176187 1472 GHGARvselstDRNTQISQDLAGLKAGETVNLTFD 1506
DUF461: domain 2 of 2, from 1495 to 1516: score 5.5, E = 0.57
CS --TTCEEEEEE--TTT..---EEE
*->LkeGdtVplTLtFedgGrgtveve<-*
Lk+G+tV lT+ F+ ++++
gi|1176187 1495 LKAGETVNLTFDFARR--ANISLQ 1516
DUF1105: domain 1 of 1, from 1535 to 1550: score 0.8, E = 6.7
*->aslfdhpkLktIaaeg<-*
as ++++ L++ a eg
gi|1176187 1535 ASSWQSKALTLTASEG 1550
DUF669: domain 1 of 1, from 1557 to 1586: score 3.6, E = 2
*->neksEyNGktYpnvnvyaknfekssyPnqq<-*
++++E+NG Y+ nv+a + k++++++
gi|1176187 1557 RGIGESNGLGYLLDNVVATASGKAEIGQVS 1586
5HT_transporter: domain 1 of 1, from 1568 to 1586: score 2.2, E = 6
*->EngvLqKsvPtpadkvEsGqis<-*
+L +v t+++k+E Gq+s
gi|1176187 1568 ---LLDNVVATASGKAEIGQVS 1586
DUF2271: domain 1 of 1, from 1574 to 1590: score 1.8, E = 4.2
*->lkakGtsELGavtlelk<-*
++a G+ E+G+v+ +l
gi|1176187 1574 ATASGKAEIGQVSAQLA 1590
CBP4: domain 1 of 1, from 1584 to 1615: score 2.0, E = 4.4
*->kieaeekqkeelararqelakaeareqreeqMRkE<-*
++ a+ q++ arar ++a+a+a +qr e +E
gi|1176187 1584 QVSAQLAQDDNAARARGDQASADADKQRLE---QE 1615
BH4: domain 1 of 1, from 1636 to 1648: score 3.6, E = 5
CS HHHHHTT---TT-
*->YKLsQnGyeweag<-*
+KL+QnG + +a+
gi|1176187 1636 HKLAQNGQDQRAA 1648
Cortex-I_coil: domain 1 of 1, from 1643 to 1673: score 6.0, E = 0.5
CS XXXXXXXXXXXX-HHHHHHHHHHHHHHHHHH
*->keekerLeAsknelaNkLAsLEqsLEseKaS<-*
+ +++ eA e+ +L +L + E aS
gi|1176187 1643 QDQRAAIEAESREMTAQLDTLARRFEQVRAS 1673
M: domain 1 of 2, from 1644 to 1664: score 1.1, E = 54
*->eaKKeLEaelqeLeeelqkLe<-*
++ + Eae e +++l++L
gi|1176187 1644 DQRAAIEAESREMTAQLDTLA 1664
DMPK_coil: domain 1 of 1, from 1650 to 1673: score 7.7, E = 0.2
*->EkkNreLeaeleqLkkemEelRar<-*
E+ +re a+l+ L + E Ra
gi|1176187 1650 EAESREMTAQLDTLARRFEQVRAS 1673
Polyketide_cyc2: domain 1 of 1, from 1654 to 1668: score 2.6, E = 4.7
*->gayeagLanLkalle<-*
++++a L+ L++++e
gi|1176187 1654 REMTAQLDTLARRFE 1668
SlyX: domain 1 of 1, from 1656 to 1679: score 0.9, E = 1.7
*->mqdqLryLteklkdvqpdsniAsqa<-*
m +qL+ L+ +++ v+ s +As++
gi|1176187 1656 MTAQLDTLARRFEQVRA-SDAASEP 1679
DUF1702: domain 1 of 1, from 1669 to 1694: score 1.8, E = 1.7
*->rpalpadGalPaYevWRqrIaarfas<-*
+++++++ ++P+ ++WR + a+r++s
gi|1176187 1669 QVRASDAASEPSGQHWRTGFADRLLS 1694
M: domain 2 of 2, from 1720 to 1740: score 7.5, E = 1.1
*->eaKKeLEaelqeLeeelqkLe<-*
+++++L++ l++ ++ +q++e
gi|1176187 1720 AQHQQLDTALAKSKTGQQRSE 1740
Tir_receptor_M: domain 1 of 1, from 1782 to 1796: score 1.0, E = 8.7
CS HHHTTTTTHHHHTT-
*->AeqAKeAGEvARqeA<-*
A qA+ AGE+A +A
gi|1176187 1782 ASQAQLAGEQAASQA 1796
RTX: domain 1 of 1, from 1799 to 1839: score -0.5, E = 2.7
*->tlaniKsqlkqglks....tknklksagssaKea.LkkAgs<-*
+++++K++++++++s++++t+++ +s+ s+a++++L ++g+
gi|1176187 1799 QANQAKQNAASLKQSgdkpTRQGVQSGPSTAAGQpLLQTGE 1839
SelB-wing_1: domain 1 of 1, from 1818 to 1847: score 1.9, E = 4.9
CS HHHHHHH HHHTTSEEEEEETTEEEEEEH
*->tRKLLqs..mAAAGqvtLLRvEnDLYAist<-*
tR+ +qs++ AAGq L E D+ A+st
gi|1176187 1818 TRQGVQSgpSTAAGQPLLQTGELDVPAVST 1847
Baculo_LEF-10: domain 1 of 1, from 1833 to 1856: score 2.7, E = 2.2
*->dsfQTadqadkeavSdSSstSELqS<-*
+ +QT + d avS+ S+ +E++S
gi|1176187 1833 PLLQT-GELDVPAVSTLSAPDEVPS 1856
Cm_res_leader: domain 1 of 2, from 1871 to 1886: score 3.4, E = 8.2
*->msGvPGALAvvtRRtis<-*
s GALA v R i
gi|1176187 1871 -SALDGALAAVNRLQIN 1886
nsp9: domain 1 of 1, from 1875 to 1884: score 1.1, E = 1.7
CS HHHHHHSBB-
*->GyigaTVRLQ<-*
G+++a+ RLQ
gi|1176187 1875 GALAAVNRLQ 1884
Tyr-DNA_phospho: domain 1 of 1, from 2056 to 2079: score 0.2, E = 5.1
CS -B---EEEEEETTSEEEEEEESS-
*->THHTKmiiLvYddGevrVvvsTAN<-*
T HT ++ Lv +dG++ v+s AN
gi|1176187 2056 TNHTRLSDLVSEDGRFTLVISNAN 2079
DUF1142: domain 1 of 1, from 2078 to 2089: score -0.8, E = 10
*->akrviaadkras<-*
a++viaa ++a+
gi|1176187 2078 ANHVIAAGNGAA 2089
Lipoprotein_3: domain 1 of 1, from 2112 to 2122: score 2.1, E = 5.3
*->vKAFGsGkske<-*
+KAFGsG+s+e
gi|1176187 2112 AKAFGSGSSQE 2122
DUF2288: domain 1 of 1, from 2134 to 2151: score 1.6, E = 8.3
*->seLraKLngeTArIsWhE<-*
eL+ L++++A ++W +
gi|1176187 2134 PELKDLLLSNMANVQWED 2151
DUF1819: domain 1 of 1, from 2139 to 2159: score 1.0, E = 6.4
*->LlLegpdenewrskivdeNlL<-*
LlL+ ++w++++ ++N++
gi|1176187 2139 LLLSNMANVQWEDAATAQNVF 2159
DUF2414: domain 1 of 1, from 2145 to 2162: score 3.1, E = 4.2
*->aNvvfkseeialqALval<-*
aNv + ++++a+++ ++l
gi|1176187 2145 ANVQWEDAATAQNVFAYL 2162
Glyco_hydro_26: domain 1 of 1, from 2153 to 2169: score 4.0, E = 0.54
CS HHHHHHHHHHHHHTT..
*->qtakkLmafLaslygrs<-*
+ta++++a+L s+yg++
gi|1176187 2153 ATAQNVFAYLTSIYGKT 2169
OST3_OST6: domain 1 of 1, from 2159 to 2180: score -0.4, E = 9.9
*->FSfllsvFtiLdirskayGYPy<-*
F++l+s++ + yG+++
gi|1176187 2159 FAYLTSIYGKTADLAREYGIHI 2180
DUF2231: domain 1 of 1, from 2170 to 2179: score 1.5, E = 6.7
*->aqLaaefGiH<-*
a La e+GiH
gi|1176187 2170 ADLAREYGIH 2179
zf-CHC2: domain 1 of 2, from 2171 to 2185: score 7.6, E = 0.19
*->kLAdragielpyekg<-*
+LA+++gi+++++++
gi|1176187 2171 DLAREYGIHINDWDP 2185
Pro_racemase: domain 1 of 1, from 2180 to 2191: score 1.1, E = 3
CS E-TT-TTTT---
*->LDPsDPfahGFt<-*
+ + DP+a+G+t
gi|1176187 2180 INDWDPLAEGIT 2191
PAF-AH_p_II: domain 1 of 1, from 2181 to 2194: score -0.6, E = 9.9
*->dQWDnliegddenl<-*
+ WD+l eg+ +n
gi|1176187 2181 NDWDPLAEGITPNA 2194
DUF2387: domain 1 of 1, from 2284 to 2311: score 1.4, E = 9
*->qrtpkevttrvnqveqkaa..VigvqfF<-*
+++p e+ + v+++e +a+ +V + ++F
gi|1176187 2284 RQVPNELSQFVPKSESTARveVKTLDQF 2311
Corona_NS2: domain 1 of 1, from 2317 to 2345: score 7.8, E = 0.18
*->kTVkdAVsKLVelAvDFIiWRateLevyv<-*
+T+ AV+ LVe +DF W e+ +
gi|1176187 2317 RTIVAAVNNLVEQSADFDSWYQAYRERQG 2345
DUF1086: domain 1 of 1, from 2359 to 2371: score 0.3, E = 9.2
*->nhpgaPvfpeyvi<-*
nh ++v+ + ++
gi|1176187 2359 NHKAEWVMANHAE 2371
RGP: domain 1 of 1, from 2371 to 2385: score -1.4, E = 8.6
*->eeWiklWkslgaqda<-*
e W +l ++ aqda
gi|1176187 2371 EAWSQLTAEHQAQDA 2385
Cu_amine_oxidN2: domain 1 of 1, from 2414 to 2423: score 3.9, E = 2.3
CS CTTSHHHHHH
*->HPLdpLtaeE<-*
+PL+pLt+++
gi|1176187 2414 QPLNPLTRFL 2423
Transposase_30: domain 1 of 1, from 2436 to 2466: score 0.3, E = 5.7
*->kaeEvknqtldyinpkdqqAddrpikeklekl<-*
++ ++ +q+ld +++ + +A++ ++ + +l
gi|1176187 2436 QVGDITRQLLD-HAVSKGEAEQVTLQGDAGRL 2466
Abhydrolase_1: domain 1 of 1, from 2514 to 2571: score 14.8, E = 0.00076
CS CEEEEECTTTSTTSSEE..GGCCGGGSHHHHHHHHHHHHHHHCTSSE
*->fdvialDlrGfGqSsrpkrgapdladyrfddlaedlealldalgldk
d +a++lrG+G S+ + + + + d+ ++ +l+++ g+
gi|1176187 2514 IDMLAVNLRGYGTSD-G----GPSEQGVYQDARTMFRYLVEERGVAP 2555
CS E EEEEEETHHHHHHH
p.vnlvGhSmGGlial<-*
++ + G+SmGG ia+
gi|1176187 2556 DkILIHGYSMGGPIAA 2571
Abhydrolase_3: domain 1 of 1, from 2537 to 2589: score 8.5, E = 0.057
CS HHHHHHHHHHHHHTH.........H.HHTEEEEEEEEEEETHHHHHH
*->idDayaAlrWlaehavgsggeddpwlelgaDpsriavaGDSAGGNLA
+ Da + +r+l+e + g+ p++i + G S GG +A
gi|1176187 2537 YQDARTMFRYLVEER-------------GVAPDKILIHGYSMGGPIA 2570
CS HHHH.HHHHHCTSS-...........EEEEEE
aavAqlrardrGgplaeldpdlspvrpagqvL<-*
a +A a ++G+p + g++L
gi|1176187 2571 ADLA-RYAAEQGKP------------VGGLLL 2589
OmpA: domain 1 of 1, from 2545 to 2570: score 6.0, E = 0.61
*->dyLvskgGvpadrisavGyGeskPva<-*
+yLv+ Gv++d+i Gy + P+a
gi|1176187 2545 RYLVEERGVAPDKILIHGYSMGGPIA 2570
SIP: domain 1 of 1, from 2545 to 2563: score 1.8, E = 5.4
*->rhLrkerGldkervraaGY<-*
r+L++erG++++++ + GY
gi|1176187 2545 RYLVEERGVAPDKILIHGY 2563
Thioesterase: domain 1 of 1, from 2562 to 2589: score 1.3, E = 4.9
CS EETTHHHHHHHHHHHHHHT---T--CEEEEE
*->GhSmGGllAfEvArrLerrqdgGeepagLil<-*
G+SmGG +A +Ar ++ G ++ gL l
gi|1176187 2562 GYSMGGPIAADLARYAAEQ---GKPVGGLLL 2589
DUF2159: domain 1 of 1, from 2676 to 2693: score 2.7, E = 3.1
*->AeeRaAreLAdqIvtrLa<-*
A +R++ + A+qIv++L
gi|1176187 2676 ASNRLMGQYAEQIVDDLF 2693
DUF2342: domain 1 of 1, from 2697 to 2709: score 0.0, E = 8.8
*->PtaaELddPaaWi<-*
P+aa++++P i
gi|1176187 2697 PSAADIEAPLKGI 2709
RMF: domain 1 of 1, from 2741 to 2753: score 4.3, E = 1.7
*->AflrGYqaGitGr<-*
Afl GYq G++G+
gi|1176187 2741 AFLAGYQQGLAGK 2753
UPF0556: domain 1 of 1, from 2846 to 2860: score 4.8, E = 0.38
*->LsKLvlvArtrhdEL<-*
LsKLvlvA+ +E
gi|1176187 2846 LSKLVLVAKQLESEG 2860
CysG_dimeriser: domain 1 of 1, from 2855 to 2878: score 3.5, E = 3.5
*->elvlaGdeeeAealleqaLagaaa<-*
+l +G+++ A++++e + ++aa
gi|1176187 2855 QLESEGQPDLARRMMEKLYSAAAV 2878
TrbI_Ftype: domain 1 of 1, from 2859 to 2869: score 1.6, E = 9.3
*->EIQtDVArRMk<-*
E Q D ArRM
gi|1176187 2859 EGQPDLARRMM 2869
DUF72: domain 1 of 1, from 2862 to 2872: score 0.9, E = 8.2
CS HHHHHHHHHHC
*->penAlrLaelL<-*
p++A+r++e L
gi|1176187 2862 PDLARRMMEKL 2872
Fibrillarin_2: domain 1 of 1, from 2862 to 2879: score -0.5, E = 4.7
*->PeIalriseKfgDAitelLi<-*
P++a+r+ eK+ A +i
gi|1176187 2862 PDLARRMMEKLYSAAA--VI 2879
Terminase_GpA: domain 1 of 1, from 2875 to 2890: score -1.3, E = 7.9
*->AaaillGlhRyeeirW<-*
Aaa++ +++Ry++
gi|1176187 2875 AAAVINNPDRYSATEL 2890
Peptidase_C58: domain 1 of 1, from 2960 to 3002: score 12.2, E = 0.0054
CS EEEEEEEEE.TTE. EEEEETTTEEEEEETTT......HHHH
*->gHavAasvdPggkg..vtFFDPNfGEftfpskesFskwfladl<-*
gHa+Aa + g++g+ + F DPN G + f+s e+Fs++++ ++
gi|1176187 2960 GHAMAAWAKQGESGriYGFYDPNAGIVEFSSAEKFSRYMTGFF 3002
DUF2002: domain 1 of 1, from 2988 to 3008: score 4.7, E = 0.46
*->FSSRilLlryLnrlFGDEKtd<-*
FSS + ry+ + FG E d
gi|1176187 2988 FSSAEKFSRYMTGFFGKEGLD 3008
Cm_res_leader: domain 2 of 2, from 3065 to 3080: score 0.7, E = 48
*->msGvPGALAvvtRRtis<-*
m+ PG vvt Rt
gi|1176187 3065 MAELPGK-TVVTERTAK 3080
MRP-L47: domain 1 of 1, from 3071 to 3077: score 1.3, E = 6.2
*->ktVlrER<-*
ktV++ER
gi|1176187 3071 KTVVTER 3077
UBA: domain 1 of 1, from 3105 to 3133: score 2.9, E = 7.6
CS CTHHHHHHHHHHHT--HH HHHHHHHHTT
*->ideelvkqLreMTGfsre.eakkALeatn<-*
+++++++qL ++G+s +++ + AL+ +n
gi|1176187 3105 SYQQILDQLATLHGASGQtKIEAALRLNN 3133
Prefoldin: domain 1 of 1, from 3163 to 3184: score 2.8, E = 4.6
CS HHHHHHHHHHHHHHHHHHHHHH
*->lkqeiesLqaelaaLreaieel<-*
++ e++sLq+e +aL + ++l
gi|1176187 3163 YRGELASLQTEVTALAKTRPDL 3184
DUF2514: domain 1 of 1, from 3169 to 3193: score 4.8, E = 0.47
*->rLRqeadkLarrLAAarhcvtsdtaAaargkaA<-*
+L++e+++L a++ + d+aA++ gkaA
gi|1176187 3169 SLQTEVTAL------AKT--RPDLAAIVIGKAA 3193
Pou: domain 1 of 1, from 3248 to 3256: score 1.7, E = 7.6
*->LekWLeeAE<-*
L+kWL eA
gi|1176187 3248 LKKWLTEAQ 3256
Phage_lysis: domain 1 of 1, from 3347 to 3357: score 0.3, E = 9.4
*->QRDVAeLDARY<-*
Q DVA+ DARY
gi|1176187 3347 QTDVAAWDARY 3357
ABC_tran: domain 1 of 1, from 3398 to 3431: score 0.5, E = 8.1
CS -HHHHHHHHHHHHT-GGGGG-EEEEE-S-HHHHHT
RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
*->DpasraqllellrelrgeqgitvllitHdldlldr<-*
D+++ + + e++ +l+ +qg+tv+ +H +++l++
gi|1176187 3398 DVNGLRFVNEQMDALK-AQGVTVIGLEHLRGELAQ 3431
CorC_HlyC: domain 1 of 1, from 3398 to 3423: score 4.2, E = 2.1
*->eieglrleVlevdgrrIkkvrirkae<-*
+++glr++ +++d+ + v ++ +e
gi|1176187 3398 DVNGLRFVNEQMDALKAQGVTVIGLE 3423
AlaDh_PNT_N: domain 1 of 1, from 3407 to 3423: score 5.0, E = 0.22
CS HHHHHHHHHT-EEEEGG
*->elteaLaakgvTaiAyE<-*
e+++aL a+gvT+i +E
gi|1176187 3407 EQMDALKAQGVTVIGLE 3423
UPF0203: domain 1 of 1, from 3411 to 3430: score 7.1, E = 0.17
*->aLktkkikpidLeeaRkeeen<-*
aLk ++++ i+Le R +e++
gi|1176187 3411 ALKAQGVTVIGLEHLR-GELA 3430
Ins134_P3_kin: domain 1 of 1, from 3458 to 3475: score 4.4, E = 0.25
*->PsLvelaRkRGidlVqlD<-*
PsL e+aR RG+ +V+lD
gi|1176187 3458 PSLFERARERGLRIVALD 3475
FAD_binding_5: domain 1 of 1, from 3473 to 3492: score 1.7, E = 4.5
CS HHHHHGGGEEEESS-TTHHHH
*->LlaqagpdAklvAGGTsLgpe<-*
+l +g+ A++v GGT++g++
gi|1176187 3473 ALD-DGSTARPVIGGTEHGLM 3492
YjeF_N: domain 1 of 1, from 3484 to 3516: score 3.8, E = 0.84
*->lGipglvLMErAGravaeval.lilkrfpkakrvl<-*
+G +++ LM rAG a+ +va ++++k p +++++
gi|1176187 3484 IGGTEHGLMYRAG-AANNVAVdVLGK-LPAGEKFV 3516
OpcA_G6PD_assem: domain 1 of 1, from 3628 to 3643: score 0.8, E = 5.6
*->aanaasrehPcRvIvl<-*
aa+++++ hP R +v+
gi|1176187 3628 AAASLAGKHPDRSLVV 3643
Ribosomal_S4e: domain 2 of 2, from 3646 to 3657: score 1.8, E = 8.2
*->ktnenYRvlyDe<-*
+++ nYRv+y++
gi|1176187 3646 DADGNYRVVYGD 3657
Glyco_hydro_14: domain 1 of 1, from 3677 to 3687: score 0.0, E = 8.8
CS ...-HHHHHHH
*->dGsntselseF<-*
dG+n+s ls+
gi|1176187 3677 DGQNNSRLSGY 3687
Host_attach: domain 1 of 1, from 3684 to 3696: score 1.6, E = 7.3
*->LtnhpvdeIekhL<-*
L++ ++de++ hL
gi|1176187 3684 LSGYSADELAGHL 3696
Dor1: domain 1 of 1, from 3688 to 3704: score -0.1, E = 7.3
*->eALeLaayvsRLkqrys<-*
+A+eLa++++RL++r +
gi|1176187 3688 SADELAGHLRRLGDRLQ 3704
Flavodoxin_2: domain 1 of 1, from 3688 to 3708: score 1.4, E = 4.6
CS HHHHHHHHHHHHHHHHCCGGH
*->sdearkemleayrarlkellg<-*
s+++ +++l+++++rl++ +g
gi|1176187 3688 SADELAGHLRRLGDRLQQEAG 3708
Bcl-2: domain 1 of 1, from 3696 to 3706: score 1.2, E = 1.6
CS HHHHHHHHHHH
*->LrraGdelekr<-*
Lrr+Gd l+++
gi|1176187 3696 LRRLGDRLQQE 3706
Herpes_BFRF1: domain 1 of 1, from 3760 to 3785: score 0.7, E = 6.3
*->vegngervtgegeslesvaasvalgr<-*
++g++ ++++++++++ vaa+ +++
gi|1176187 3760 QGGRKHTRNEADVWARKVAANKVVLT 3785
zf-U1: domain 1 of 1, from 3761 to 3773: score 2.3, E = 7.8
CS -SSHHHHHHHHHS
*->gGrkHkenvkdYy<-*
gGrkH +n +d+
gi|1176187 3761 GGRKHTRNEADVW 3773
GSDH: domain 1 of 1, from 3782 to 3800: score 2.1, E = 4.6
*->irLsLdg..dkVteeeRll<-*
++L+Ld+ +++V++ eR+
gi|1176187 3782 VVLTLDDagEPVVHNERVR 3800
EXOSC1: domain 1 of 1, from 3804 to 3813: score 1.8, E = 5.4
*->LPkvGdiVlARV<-*
++GdiVlA+V
gi|1176187 3804 --AEGDIVLAKV 3813
OB_RNB: domain 1 of 1, from 3806 to 3827: score 4.2, E = 2.4
*->GDrVlVritkegdrrgrregrivri<-*
GD+Vl+++ g+ ++r +g+i
gi|1176187 3806 GDIVLAKV---GEGESRARGAIADN 3827
Adeno_shaft: domain 4 of 4, from 3854 to 3864: score 0.2, E = 70
CS S--EEE-B-TT
*->nnsLtlntgpG<-*
++++ +n+g+G
gi|1176187 3854 SGNIQVNVGDG 3864
DGOK: domain 1 of 1, from 3870 to 3876: score -1.6, E = 7.5
*->DWGstrL<-*
WG+t+L
gi|1176187 3870 NWGTTNL 3876
RtxA: domain 47 of 47, from 3889 to 3906: score 6.7, E = 0.87
*->GaGgaNvitkvGdggdlaf<-*
+ G Nv++++G +gd+ +
gi|1176187 3889 AFGDNNVMVHIG-DGDSKH 3906
DUF2134: domain 1 of 1, from 4042 to 4092: score 1.7, E = 6.1
*->AAAqrlsdgsaaaanssaaaaaaAaaaaarngf..gggdlalslsve
++ ++ g+ s+a+ + +A++ + n + g+g+ +++v+
gi|1176187 4042 SGGGQGEQGPL----SRADKLRQANEKLVFNFAvaGQGA---DIQVT 4081
cGywnat.daa<-*
+G+wn+ +++
gi|1176187 4082 TGNWNFVfGDN 4092
ACC_central: domain 1 of 1, from 4044 to 4053: score -1.8, E = 8.4
*->ggtgkpGslH<-*
gg+g++G+l+
gi|1176187 4044 GGQGEQGPLS 4053
GET2: domain 1 of 1, from 4104 to 4110: score -0.8, E = 9.2
*->lfGLlsy<-*
lfGL+++
gi|1176187 4104 LFGLMTQ 4110
Cupin_1: domain 1 of 1, from 4105 to 4137: score 3.4, E = 1.8
CS EECCCSSC...SEEEETTEEEEEECTTTCTGCCHHHTT
*->fnllepspgfADvynsegGrlttansnnlPkglltlgg<-*
f+l ++ + + ++ +++t+++ +lP ++l+ ++
gi|1176187 4105 FGLMTQEF----TASGQAKTTFTFTPTDLP-RQLQNRL 4137
W_rich_C: domain 2 of 2, from 4145 to 4159: score 0.2, E = 12
*->gstgllegifGyyyV<-*
g+ + l++ifG +y+
gi|1176187 4145 GADTTLADIFGVDYN 4159
zf-CHC2: domain 2 of 2, from 4150 to 4163: score 0.2, E = 25
*->LAdragielpyekg<-*
LAd++g++++ ++
gi|1176187 4150 LADIFGVDYNARGQ 4163
RHS_repeat: domain 1 of 1, from 4158 to 4171: score 3.2, E = 4.7
*->YDanGrLtavtdpsgpv<-*
Y+a+G+L+a +g++
gi|1176187 4158 YNARGQLVA---RDGAA 4171
DUF244: domain 1 of 1, from 4282 to 4307: score 1.3, E = 5.5
*->lEVsnlrnkIkknyaieLlishNiDndtl<-*
+EV l+ +k+n +Ll N + t+
gi|1176187 4282 AEVVALASNLKQNLTADLL---NMKEQTF 4307
XLF: domain 1 of 1, from 4287 to 4316: score 2.9, E = 2.2
*->lalesqqvieeLidlLneKDaDDDFdDFQFFGiKreidkLqdkled<
la++ +q + dlLn+K++ d+L ++++
gi|1176187 4287 LASNLKQ--NLTADLLNMKEQ--------------TFDFLRNSGHL 4316
-*
gi|1176187 - -
TIMP: domain 1 of 1, from 4314 to 4333: score 0.3, E = 1.8
CS EEEESTTEEE-ETTSTEEEC
*->GrvesDGklhItlCnFiepW<-*
G +++DG +h++l n+ W
gi|1176187 4314 GHLQGDGDMHVSLGNYNFNW 4333
HemolysinCabind: domain 3 of 8, from 4351 to 4368: score 6.1, E = 1.1
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G+D+ y ++ +++
gi|1176187 4351 WGGRGDDVFYATGTSNIF 4368
PalH: domain 1 of 1, from 4355 to 4366: score 0.9, E = 3.2
*->GdDmlfvdptsn<-*
GdD++ +++tsn
gi|1176187 4355 GDDVFYATGTSN 4366
HemolysinCabind: domain 4 of 8, from 4369 to 4376: score 1.0, E = 40
CS E--SSS-E
*->yGGaGnDt<-*
+GGaG Dt
gi|1176187 4369 TGGAGQDT 4376
HemolysinCabind: domain 5 of 8, from 4387 to 4394: score 2.2, E = 17
CS E--SSS-E
*->yGGaGnDt<-*
+GG+G+D+
gi|1176187 4387 FGGQGDDV 4394
SpoIIE: domain 1 of 1, from 4388 to 4402: score 5.6, E = 0.2
*->geleDDvtlLvlrvr<-*
g + DDv++L+ rv+
gi|1176187 4388 GGQGDDVAVLAGRVN 4402
HemolysinCabind: domain 6 of 8, from 4423 to 4431: score 1.5, E = 27
CS E--SSS-EE
*->yGGaGnDtL<-*
GGaG D L
gi|1176187 4423 EGGAGQDYL 4431
TIP41: domain 1 of 1, from 4468 to 4483: score 3.5, E = 1.9
*->MvFGn.NyLriehlKsg<-*
MvFGn+N+L eh +++
gi|1176187 4468 MVFGNhNRLLAEH-GNN 4483
HemolysinCabind: domain 7 of 8, from 4493 to 4503: score 6.7, E = 0.75
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
t++Gg+G D+l
gi|1176187 4493 TIRGGDGQDRL 4503
DUF1008: domain 1 of 1, from 4502 to 4515: score 7.8, E = 0.14
*->qLlpeQverFkaLa<-*
+L+++Qv++F +L
gi|1176187 4502 RLIADQVAKFSQLD 4515
HemolysinCabind: domain 8 of 8, from 4514 to 4523: score 5.4, E = 1.8
CS EEEESSCGEE
*->LyGgaGnDtl<-*
L+GgaG+D+l
gi|1176187 4514 LDGGAGDDLL 4523
DUF1683: domain 1 of 1, from 4539 to 4547: score 1.0, E = 9.4
*->DsFmFSGhk<-*
DsF+FSG+
gi|1176187 4539 DSFVFSGAV 4547
malic: domain 1 of 1, from 4557 to 4565: score -0.9, E = 9.1
CS TTC-TSSEEEH
*->reeldipvFND<-*
+e d+ vFND
gi|1176187 4557 KE--DFIVFND 4565
RTX_C: domain 1 of 1, from 4562 to 4580: score 3.3, E = 1.9
*->slSDlnfkDltFkrvgndL<-*
++ D++ +Dl Fkr g dL
gi|1176187 4562 VFNDVSWRDLWFKRSGYDL 4580
PI3K_C2: domain 1 of 1, from 4578 to 4605: score 1.5, E = 6.5
CS ............---------G.GGG-S-
*->nrLekllkkyerGdvqsnpsvlwlDfltl<-*
++L+ l++++ G++++ + +++l + t+
gi|1176187 4578 YDLQLLVNRHTDGTSEQ-GKFEQLGSATF 4605
HTH_6: domain 1 of 1, from 4656 to 4672: score 1.1, E = 9.6
*->mnlLekIqslyekltks<-*
m+lL+++ s+ ++l +s
gi|1176187 4656 MGLLNRLDSQANSLVQS 4672
RNA_ligase: domain 1 of 1, from 4666 to 4678: score 3.3, E = 1
CS XXXXXXXXXXXXX
*->arellrsnWkdil<-*
a++l++s+W+d++
gi|1176187 4666 ANSLVQSAWGDVI 4678
//