hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 118053060.fa
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Query sequence: gi|118053060|ref|ZP_01521605.1|
Accession: [none]
Description: Pyrrolo-quinoline quinone [Comamonas testosteroni KF-1]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
BNR BNR/Asp-box repeat 141.9 1.3e-41 15
PKD PKD domain 30.1 1e-08 7
Y_Y_Y Y_Y_Y domain 20.6 2.2e-05 2
HYR HYR domain 17.0 0.0002 4
DUF1929 Domain of unknown function (DUF1929) 13.4 0.00045 7
SBBP Beta-propeller repeat 14.8 0.0021 7
fn3 Fibronectin type III domain 13.7 0.0037 2
DUF1236 Protein of unknown function (DUF1236) 11.2 0.019 6
PPC Bacterial pre-peptidase C-terminal do 10.7 0.022 1
He_PIG Putative Ig domain 11.0 0.025 5
Fumble Fumble 7.5 0.049 1
MCE mce related protein 8.7 0.077 4
DUF1522 Domain of Unknown Function (DUF1522) 7.2 0.15 4
A2M_N_2 Alpha-2-macroglobulin family N-termin 7.6 0.16 3
YajC Preprotein translocase subunit 8.4 0.17 1
DUF2359 Uncharacterised conserved protein (DU 2.8 0.26 1
Mo-co_dimer Mo-co oxidoreductase dimerisation dom 5.6 0.3 3
DUF2201 Predicted metallopeptidase (DUF2201) 4.2 0.3 1
Pentapeptide Pentapeptide repeats (8 copies) 8.0 0.32 1
DUF1573 Protein of unknown function (DUF1573) 7.1 0.47 5
DUF1130 Protein of unknown function (DUF1130) 4.5 0.56 1
DUF1118 Protein of unknown function (DUF1118) 4.1 0.57 2
Big_3 Bacterial Ig-like domain (group 3) 6.5 0.69 5
Hydant_A_N Hydantoinase/oxoprolinase N-terminal 4.4 0.97 1
LuxS S-Ribosylhomocysteinase (LuxS) 4.2 1 1
Terminase_6 Terminase-like family 3.0 1.1 1
DUF735 Protein of unknown function (DUF735) 3.1 1.3 2
DAO FAD dependent oxidoreductase 2.5 1.7 1
E1_DerP2_DerF2 ML domain 3.1 1.9 1
DUF541 Protein of unknown function (DUF541) 3.2 2 1
DUF1221 Protein of unknown function (DUF1221) 0.3 2.1 1
DUF2423 Protein of unknown function (DUF2423) 3.2 2.2 1
Cadherin Cadherin domain 3.8 2.2 2
DUF1273 Protein of unknown function (DUF1273) 2.2 2.5 1
DUF1535 Domain of Unknown Function (DUF1535) 3.6 2.6 5
UPF0052 Uncharacterised protein family UPF005 2.0 2.6 1
Gmad2 Immunoglobulin-like domain of bacteri 2.6 2.9 1
Flu_B_NS1 Influenza B non-structural protein (N 1.3 3 1
Phage_GPD Phage late control gene D protein (GP 1.7 3 1
CHB_HEX_C Chitobiase/beta-hexosaminidase C-term 3.9 3.1 1
Big_2 Bacterial Ig-like domain (group 2) 3.1 3.2 3
DUF1494 Protein of unknown function (DUF1494) 1.1 3.2 1
DUF1344 Protein of unknown function (DUF1344) 3.2 3.4 1
Glucodextran_B Glucodextranase, domain B 2.8 3.5 1
UPF0561 Uncharacterised protein family UPF056 2.4 3.7 1
DUF2434 Protein of unknown function (DUF2434) 1.2 3.9 1
HlyD HlyD family secretion protein 1.9 4.5 1
Transket_pyr Transketolase, pyrimidine binding dom 1.5 4.5 1
nsp8 nsp8 replicase 0.7 5 1
AlaDh_PNT_N Alanine dehydrogenase/PNT, N-terminal 0.9 5.1 1
DUF11 Domain of unknown function DUF11 3.2 5.5 1
SHNi-TPR SHNi-TPR 3.5 5.9 3
Baculo_PEP_C Baculovirus polyhedron envelope prote 2.2 5.9 1
DUF2301 Uncharacterized integral membrane pro 1.0 6 1
DUF1069 Protein of unknown function (DUF1069) 1.5 6.1 1
Methyltransf_6 Demethylmenaquinone methyltransferase 1.0 6.4 1
NOZZLE Plant transcription factor NOZZLE -0.4 6.5 1
BAT2_N BAT2 N-terminus 0.6 6.6 1
Cu-oxidase Multicopper oxidase 1.2 6.8 1
Viral_coat Viral coat protein (S domain) 0.9 7 1
DUF2005 Protein of unknown function (DUF2005) -1.1 7.2 1
Arg_repressor_C Arginine repressor, C-terminal domain 2.5 7.2 2
DASH_Spc19 Spc19 1.2 7.5 1
SpoVT_AbrB SpoVT / AbrB like domain 2.5 7.6 1
PhzC-PhzF Phenazine biosynthesis-like protein -0.3 7.9 1
Dysbindin Dysbindin (Dystrobrevin binding prote -0.1 7.9 1
CheR_N CheR methyltransferase, all-alpha dom 2.2 8 1
Drmip_Hesp Developmentally Regulated MAPK Intera 1.3 8 1
Gp37 Gp37 protein 1.3 8.2 1
DUF1741 Domain of unknown function (DUF1741) 0.4 8.3 1
ExsB ExsB 0.5 8.3 1
Integrin_beta Integrin, beta chain -1.7 8.3 1
Arabinose_trans Mycobacterial cell wall arabinan synt -2.0 8.5 1
PBS_linker_poly Phycobilisome Linker polypeptide 0.5 8.6 1
DUF2141 Uncharacterized protein conserved in 1.4 8.8 2
Protocadherin Protocadherin 0.1 9 1
VWD von Willebrand factor type D domain 0.3 9.2 1
Peptidase_S6 Immunoglobulin A1 protease -1.3 9.3 1
DUF466 Protein of unknown function (DUF466) 1.3 9.7 1
HHH Helix-hairpin-helix motif 2.7 9.8 1
LysM LysM domain 2.5 9.8 1
LamB_YcsF LamB/YcsF family 0.4 10 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
DUF466 1/1 1 16 [. 1 16 [. 1.3 9.7
LamB_YcsF 1/1 68 84 .. 238 254 .] 0.4 10
Transket_pyr 1/1 69 87 .. 1 19 [. 1.5 4.5
Terminase_6 1/1 72 84 .. 500 512 .] 3.0 1.1
HlyD 1/1 107 126 .. 300 321 .] 1.9 4.5
YajC 1/1 107 125 .. 29 47 .. 8.4 0.17
DUF1344 1/1 115 135 .. 55 82 .] 3.2 3.4
CheR_N 1/1 130 148 .. 1 19 [. 2.2 8
DUF1130 1/1 137 152 .. 108 123 .] 4.5 0.56
UPF0052 1/1 163 194 .. 136 170 .. 2.0 2.6
PBS_linker_poly 1/1 207 216 .. 62 71 .. 0.5 8.6
DAO 1/1 214 248 .. 174 209 .. 2.5 1.7
VWD 1/1 335 350 .. 152 167 .] 0.3 9.2
DUF1273 1/1 374 383 .. 1 12 [. 2.2 2.5
nsp8 1/1 411 424 .. 1 14 [. 0.7 5
PhzC-PhzF 1/1 466 475 .. 330 339 .] -0.3 7.9
ExsB 1/1 468 475 .. 1 8 [. 0.5 8.3
Pentapeptide 1/1 539 552 .. 1 14 [. 8.0 0.32
PKD 1/7 596 697 .. 1 92 [] 5.1 0.51
DUF2005 1/1 633 656 .. 1 25 [. -1.1 7.2
He_PIG 1/5 671 686 .. 46 61 .] 1.9 9.2
Y_Y_Y 1/2 671 698 .. 39 69 .] 7.6 0.15
Cadherin 1/2 672 698 .. 72 107 .] 1.5 10
BNR 1/15 680 691 .. 1 12 [] 5.6 2.3
Drmip_Hesp 1/1 714 724 .. 101 111 .] 1.3 8
fn3 1/2 778 803 .. 60 84 .] 11.6 0.014
PKD 2/7 787 809 .. 70 92 .] 1.2 8.1
HYR 1/4 792 809 .. 68 86 .] 3.0 2.9
PKD 3/7 860 878 .. 73 92 .] 6.2 0.23
Mo-co_dimer 1/3 861 876 .. 50 65 .. 3.2 1.5
BNR 2/15 862 873 .. 1 12 [] 10.0 0.11
DASH_Spc19 1/1 989 1000 .. 1 12 [. 1.2 7.5
HYR 2/4 993 1019 .. 60 86 .] 2.6 3.8
DUF541 1/1 1020 1060 .. 173 226 .] 3.2 2
Cadherin 2/2 1031 1116 .. 1 107 [] 2.3 6.1
PKD 4/7 1039 1115 .. 1 92 [] 9.2 0.027
PPC 1/1 1039 1099 .. 9 85 .] 10.7 0.022
DUF1494 1/1 1056 1064 .. 165 173 .] 1.1 3.2
Peptidase_S6 1/1 1066 1079 .. 906 919 .] -1.3 9.3
Y_Y_Y 2/2 1082 1116 .. 32 69 .] 12.9 0.004
DUF2301 1/1 1088 1098 .. 1 11 [. 1.0 6
Protocadherin 1/1 1102 1111 .. 1 10 [. 0.1 9
Viral_coat 1/1 1141 1156 .. 223 240 .] 0.9 7
Arg_repressor_C 1/2 1146 1159 .. 1 14 [. 1.3 16
fn3 2/2 1178 1193 .. 66 84 .] 2.0 7.6
Arabinose_trans 1/1 1182 1197 .. 1111 1126 .] -2.0 8.5
DUF2141 1/2 1183 1198 .. 1 17 [. 0.1 22
LuxS 1/1 1219 1230 .. 1 12 [. 4.2 1
Big_2 1/3 1293 1318 .. 64 90 .] 0.6 17
HYR 3/4 1296 1314 .. 56 75 .. 11.3 0.0098
PKD 5/7 1297 1323 .. 61 92 .] 6.4 0.19
He_PIG 2/5 1300 1313 .. 48 61 .] 0.0 32
Big_2 2/3 1329 1351 .. 1 25 [. 1.5 9.2
A2M_N_2 1/3 1333 1363 .. 1 32 [. 4.2 1.4
PKD 6/7 1335 1351 .. 1 22 [. 1.6 5.9
E1_DerP2_DerF2 1/1 1342 1366 .. 94 117 .. 3.1 1.9
DUF2434 1/1 1370 1377 .. 1 10 [. 1.2 3.9
Big_2 3/3 1430 1470 .. 1 45 [. 1.0 13
A2M_N_2 2/3 1434 1472 .. 1 38 [. 3.3 2.4
Cu-oxidase 1/1 1505 1531 .. 157 189 .] 1.2 6.8
Flu_B_NS1 1/1 1507 1532 .. 1 27 [. 1.3 3
Mo-co_dimer 2/3 1576 1589 .. 50 63 .. 0.8 7.6
BNR 3/15 1577 1588 .. 1 12 [] 8.4 0.32
Integrin_beta 1/1 1755 1771 .. 200 216 .. -1.7 8.3
Dysbindin 1/1 1768 1785 .. 140 157 .] -0.1 7.9
DUF1741 1/1 1771 1780 .. 1 10 [. 0.4 8.3
SpoVT_AbrB 1/1 1772 1797 .. 23 51 .] 2.5 7.6
Mo-co_dimer 3/3 1776 1792 .. 48 64 .. 1.6 4.3
BNR 4/15 1779 1790 .. 1 12 [] 6.8 1
Gmad2 1/1 1797 1823 .. 66 98 .] 2.6 2.9
He_PIG 3/5 1805 1820 .. 46 61 .] 5.3 1
Methyltransf_6 1/1 1912 1918 .. 179 185 .] 1.0 6.4
HHH 1/1 1967 1977 .. 20 30 .] 2.7 9.8
UPF0561 1/1 1970 1981 .. 116 127 .] 2.4 3.7
Fumble 1/1 1991 2001 .. 1 11 [. 7.5 0.049
Hydant_A_N 1/1 1992 2000 .. 1 9 [. 4.4 0.97
LysM 1/1 2020 2026 .. 1 7 [. 2.5 9.8
Baculo_PEP_C 1/1 2051 2080 .. 122 155 .] 2.2 5.9
DUF1236 1/6 2067 2089 .. 1 24 [. 0.8 18
DUF1929 1/7 2072 2100 .. 1 28 [. 2.6 1.6
Big_3 1/5 2077 2089 .. 1 13 [. 1.9 12
NOZZLE 1/1 2078 2100 .. 292 314 .] -0.4 6.5
SHNi-TPR 1/3 2080 2106 .. 1 27 [. 1.7 19
DUF1522 1/4 2104 2115 .. 106 118 .] 1.8 5.3
BNR 5/15 2118 2129 .. 1 12 [] 9.7 0.13
SBBP 1/7 2160 2169 .. 30 39 .] 1.4 18
DUF1535 1/5 2167 2173 .. 43 49 .] 1.0 16
DUF1929 2/7 2174 2213 .. 1 39 [. 0.4 8.2
DUF1573 1/5 2189 2198 .. 36 45 .] 1.4 20
MCE 1/4 2190 2204 .. 1 15 [. 0.2 23
BNR 6/15 2220 2231 .. 1 12 [] 9.7 0.13
SBBP 2/7 2262 2271 .. 30 39 .] 1.4 18
DUF1535 2/5 2269 2275 .. 43 49 .] 1.0 16
DUF1236 2/6 2271 2293 .. 1 24 [. 1.9 8.6
DUF1929 3/7 2276 2304 .. 1 28 [. 2.6 1.6
Big_3 2/5 2281 2293 .. 1 13 [. 1.9 12
SHNi-TPR 2/3 2284 2310 .. 1 27 [. 1.7 19
DUF1522 2/4 2308 2319 .. 106 118 .] 1.8 5.3
BNR 7/15 2322 2333 .. 1 12 [] 8.5 0.31
DUF1535 3/5 2371 2377 .. 43 49 .] 1.0 16
DUF1236 3/6 2373 2395 .. 1 24 [. 1.9 8.6
DUF1929 4/7 2378 2395 .. 1 18 [. 2.4 1.9
Big_3 3/5 2383 2395 .. 1 13 [. 1.9 12
SHNi-TPR 3/3 2386 2412 .. 1 27 [. 0.1 54
DUF1522 3/4 2410 2421 .. 106 118 .] 1.8 5.3
BNR 8/15 2424 2435 .. 1 12 [] 10.3 0.087
BAT2_N 1/1 2451 2471 .. 179 200 .] 0.6 6.6
SBBP 3/7 2466 2475 .. 30 39 .] 0.6 31
DUF1535 4/5 2473 2479 .. 43 49 .] 0.3 27
AlaDh_PNT_N 1/1 2477 2486 .. 136 145 .] 0.9 5.1
A2M_N_2 3/3 2483 2551 .. 1 60 [. 0.1 18
DUF11 1/1 2486 2505 .. 31 50 .. 3.2 5.5
DUF2141 2/2 2489 2502 .. 101 115 .] 1.4 9.1
DUF1573 2/5 2495 2504 .. 36 45 .] 2.5 9.9
DUF1522 4/4 2512 2523 .. 106 118 .] 1.8 5.3
BNR 9/15 2526 2537 .. 1 12 [] 10.3 0.087
DUF1929 5/7 2582 2621 .. 1 39 [. 0.5 7.6
DUF2359 1/1 2586 2596 .. 459 469 .] 2.8 0.26
DUF1573 3/5 2597 2606 .. 36 45 .] 1.4 20
MCE 2/4 2598 2612 .. 1 15 [. 0.2 23
BNR 10/15 2628 2639 .. 1 12 [] 12.2 0.023
SBBP 4/7 2670 2679 .. 30 39 .] 0.6 31
DUF1535 5/5 2677 2683 .. 43 49 .] 0.3 27
DUF1929 6/7 2684 2723 .. 1 39 [. 4.4 0.4
DUF1573 4/5 2699 2708 .. 36 45 .] 1.5 19
MCE 3/4 2700 2719 .. 1 20 [. 4.7 1.2
Arg_repressor_C 2/2 2707 2722 .. 1 16 [. 1.2 17
DUF1118 1/2 2722 2734 .. 183 195 .] 2.0 2.3
BNR 11/15 2730 2741 .. 1 12 [] 10.2 0.095
SBBP 5/7 2738 2770 .. 1 33 [. 6.9 0.46
DUF1236 4/6 2781 2802 .. 1 23 [. 1.9 8.7
DUF1929 7/7 2786 2825 .. 1 39 [. 0.6 7.3
Big_3 4/5 2791 2803 .. 1 13 [. 0.4 33
DUF1573 5/5 2801 2810 .. 36 45 .] 0.2 44
DUF1118 2/2 2824 2836 .. 183 195 .] 2.0 2.3
BNR 12/15 2832 2843 .. 1 12 [] 10.2 0.095
SBBP 6/7 2840 2872 .. 1 33 [. 3.9 3.5
DUF735 1/2 2852 2862 .. 201 211 .] 1.2 4.2
DUF1236 5/6 2883 2905 .. 1 24 [. 2.7 5.2
BNR 13/15 2934 2945 .. 1 12 [] 10.7 0.066
HYR 4/4 2967 2978 .. 69 81 .. 0.0 22
SBBP 7/7 2976 2985 .. 30 39 .] 0.0 47
DUF1236 6/6 2985 3006 .. 1 23 [. 1.9 8.7
Big_3 5/5 2995 3007 .. 1 13 [. 0.4 33
MCE 4/4 3006 3025 .. 1 20 [. 3.7 2.2
BNR 14/15 3036 3047 .. 1 12 [] 10.5 0.074
He_PIG 4/5 3038 3057 .. 32 51 .. 0.1 30
DUF735 2/2 3056 3066 .. 201 211 .] 1.8 2.9
Gp37 1/1 3123 3133 .. 109 119 .. 1.3 8.2
BNR 15/15 3129 3140 .. 1 12 [] 8.8 0.25
CHB_HEX_C 1/1 3129 3138 .. 25 34 .. 3.9 3.1
DUF2201 1/1 3149 3164 .. 18 33 .. 4.2 0.3
Phage_GPD 1/1 3150 3166 .. 1 17 [. 1.7 3
DUF1069 1/1 3199 3208 .. 197 206 .] 1.5 6.1
DUF1221 1/1 3218 3227 .. 210 221 .] 0.3 2.1
He_PIG 5/5 3308 3329 .. 1 38 [. 3.6 3.1
Glucodextran_B 1/1 3327 3338 .. 1 13 [. 2.8 3.5
PKD 7/7 3338 3360 .. 68 92 .] 0.5 13
DUF2423 1/1 3378 3390 .. 34 46 .] 3.2 2.2
Alignments of top-scoring domains:
DUF466: domain 1 of 1, from 1 to 16: score 1.3, E = 9.7
*->mfkdlrnvgrylgQta<-*
m+ + r ++ +l Q++
gi|1180530 1 MTRKSRPFWNRLTQAM 16
LamB_YcsF: domain 1 of 1, from 68 to 84: score 0.4, E = 10
CS HHHHHHHHHHHHHHHHT
*->PhAlafarrIRaaLeee<-*
+hA+ a+++R aL +e
gi|1180530 68 EHAVDTASALRHALTAE 84
Transket_pyr: domain 1 of 1, from 69 to 87: score 1.5, E = 4.5
CS -EEHHHHHHHHHHHHTTT-
*->kkiatrkAsgeALaelaee<-*
+++t+ A+++AL ++a++
gi|1180530 69 HAVDTASALRHALTAEAQR 87
Terminase_6: domain 1 of 1, from 72 to 84: score 3.0, E = 1.1
*->DaaDAlryAlnal<-*
D+a Alr+Al+a+
gi|1180530 72 DTASALRHALTAE 84
HlyD: domain 1 of 1, from 107 to 126: score 1.9, E = 4.5
CS ----------------------
*->gldpGafnqsttplvpGevviv<-*
+++ +++q ++l+pG+ v+v
gi|1180530 107 RVQ--DYQQLISGLKPGTEVVV 126
YajC: domain 1 of 1, from 107 to 125: score 8.4, E = 0.17
*->rqKehkeMlssLkkGDeVv<-*
r + +++++s+Lk+G eVv
gi|1180530 107 RVQDYQQLISGLKPGTEVV 125
DUF1344: domain 1 of 1, from 115 to 135: score 3.2, E = 3.4
*->ieaLkpGmkVvViYdevdnGkrvitDiq<-*
i +LkpG +VvV + +d G +q
gi|1180530 115 ISGLKPGTEVVVLDSSKD-G------LQ 135
CheR_N: domain 1 of 1, from 130 to 148: score 2.2, E = 8
*->sendlerfiellyertGid<-*
s+++l+++++ l r+Gid
gi|1180530 130 SKDGLQQIADYLDGRSGID 148
DUF1130: domain 1 of 1, from 137 to 152: score 4.5, E = 0.56
*->vadrallarGveVvHi<-*
+ad++ + G++VvH+
gi|1180530 137 IADYLDGRSGIDVVHV 152
UPF0052: domain 1 of 1, from 163 to 194: score 2.0, E = 2.6
*->lGNLfLaAlseilgsldeAidllskvLgvkGvkVl<-*
lGNL+L +s+ l s+++A+ l k+L+ +G ++l
gi|1180530 163 LGNLWL--DSQNLASHSQALASLGKALNADG-DIL 194
PBS_linker_poly: domain 1 of 1, from 207 to 216: score 0.5, E = 8.6
*->RdFvRgLAKS<-*
RdF+ LAKS
gi|1180530 207 RDFIESLAKS 216
DAO: domain 1 of 1, from 214 to 248: score 2.5, E = 1.7
CS HHHTT-EEEES--ECEEEEETTC.EEEEETTEEEEE
*->AealGveilegteVtgleregggrvvVeTedGeirA<-*
A+ G+++ t tg r gg +v+eT+ G+i+A
gi|1180530 214 AKSTGADVAASTNLTGAHRRGGD-WVLETSTGSIEA 248
VWD: domain 1 of 1, from 335 to 350: score 0.3, E = 9.2
*->nfdgepedDfrtpdGs<-*
nfdgep + f +++s
gi|1180530 335 NFDGEPLQSFKVASNS 350
DUF1273: domain 1 of 1, from 374 to 383: score 2.2, E = 2.5
*->MtKrLwVTGYrs<-*
t +L+VTGYr+
gi|1180530 374 -T-TLLVTGYRN 383
nsp8: domain 1 of 1, from 411 to 424: score 0.7, E = 5
CS --GGCSTTSHHHHH
*->SVaSeFvslPSYva<-*
SV S Fv+ S+v+
gi|1180530 411 SVNSNFVGVDSFVI 424
PhzC-PhzF: domain 1 of 1, from 466 to 475: score -0.3, E = 7.9
CS EE-EEEEEEE
*->tGkAVtvmeG<-*
+G+AVt ++G
gi|1180530 466 NGTAVTLFSG 475
ExsB: domain 1 of 1, from 468 to 475: score 0.5, E = 8.3
*->kAVVllSG<-*
+AV l+SG
gi|1180530 468 TAVTLFSG 475
Pentapeptide: domain 1 of 1, from 539 to 552: score 8.0, E = 0.32
CS -EECT-B-TTEEEC
*->anLsgAnLrgAdLr<-*
+nLsgA+L++Ad++
gi|1180530 539 INLSGATLSNADMS 552
PKD: domain 1 of 7, from 596 to 697: score 5.1, E = 0.51
CS EESS. ....SSSEBTTEEEEEEECT.B.TT.SSECEEEEE-SS
*->vsasa.veegpsvvalgetVtFtassSydpdpGspvsysWdFGD...
v+a+++v++ p+ + l t+ + ++++ + + D ++
gi|1180530 596 VVAVVpVNDAPTEITLSSTAFGQSAG------NNATVATLSATDvds 636
CS .SSSEEEECSSEEEEEESS. ... SEEEEEEEEEEETT
......ggspgttstepnvtHtYskg......sVt.pGtYtVtLtvsngv
+ + + +s+++++ + ++ + s + + +++s+ ++G Y+++L+v+++
gi|1180530 637 saftysLVSGTGSTDNVSFALVGS-TlrannpSGMpAGLYSIRLRVTDDG 685
CS CEEEEEEEEEEE
gsasattttvtV<-*
g++ + +t+tV
gi|1180530 686 GASYEKIVTLTV 697
DUF2005: domain 1 of 1, from 633 to 656: score -1.1, E = 7.2
*->mslnivayrysivsgvnsssvvsPA<-*
++ a+ ys+vsg s+ vs A
gi|1180530 633 -DVDSSAFTYSLVSGTGSTDNVSFA 656
He_PIG: domain 1 of 5, from 671 to 686: score 1.9, E = 9.2
*->qpGsytftvtatdgsg<-*
++G y++++ +td +g
gi|1180530 671 PAGLYSIRLRVTDDGG 686
Y_Y_Y: domain 1 of 2, from 671 to 698: score 7.6, E = 0.15
*->ppGkYtikvkakdkdgnwsyddiasltftvl<-*
p+G Y i+++++d dg sy+ +++t+tv+
gi|1180530 671 PAGLYSIRLRVTD-DGGASYE--KIVTLTVA 698
Cadherin: domain 1 of 2, from 672 to 698: score 1.5, E = 10
CS .S-B--EEE----.........S---EEEE--EEE-
*->ngeYeLtveAtDadpllasgggpplsstatvtitVl<-*
+g Y++ +++tD + + s + vt tV
gi|1180530 672 AGLYSIRLRVTDDG---------GASYEKIVTLTVA 698
BNR: domain 1 of 15, from 680 to 691: score 5.6, E = 2.3
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
++++DgG++ +k
gi|1180530 680 RVTDDGGASYEK 691
Drmip_Hesp: domain 1 of 1, from 714 to 724: score 1.3, E = 8
*->AQSeqFnVtgs<-*
A S+ F+++gs
gi|1180530 714 ATSGGFTISGS 724
fn3: domain 1 of 2, from 778 to 803: score 11.6, E = 0.014
CS EES--TT-EEEEEEEEEETTE -EBE
*->ltgLkPgteYtvrVqAvnggG.GpeS<-*
l+gL + t Y v+V+A + +G++ S
gi|1180530 778 LSGLAASTMYDVYVVAKDSAGnSTSS 803
PKD: domain 2 of 7, from 787 to 809: score 1.2, E = 8.1
CS EEEEEEEEETTCEEEEEEEEEEE
*->YtVtLtvsngvgsasattttvtV<-*
Y+V +++++++g+++++ + V
gi|1180530 787 YDVYVVAKDSAGNSTSSVFKLDV 809
HYR: domain 1 of 4, from 792 to 809: score 3.0, E = 2.9
*->tatDnaGNeAdsCtFtVtV<-*
+a D+aGN+ s +F+ V
gi|1180530 792 VAKDSAGNST-SSVFKLDV 809
PKD: domain 3 of 7, from 860 to 878: score 6.2, E = 0.23
CS EEEEEETTCEEEEEEEEEEE
*->tLtvsngvgsasattttvtV<-*
t+ vs ++g+++++ +t+ V
gi|1180530 860 TVQVSLDNGASWTN-ATIAV 878
Mo-co_dimer: domain 1 of 3, from 861 to 876: score 3.2, E = 1.5
CS EEEESSTTSS-EE-EE
*->VEVSLDgGksWrlAei<-*
V VSLD+G sW+ A i
gi|1180530 861 VQVSLDNGASWTNATI 876
BNR: domain 2 of 15, from 862 to 873: score 10.0, E = 0.11
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
++S D+G++W+
gi|1180530 862 QVSLDNGASWTN 873
DASH_Spc19: domain 1 of 1, from 989 to 1000: score 1.2, E = 7.5
*->sLdesisSLeas<-*
sL+++ SL+a+
gi|1180530 989 SLSDGLHSLSAI 1000
HYR: domain 2 of 4, from 993 to 1019: score 2.6, E = 3.8
*->GEettVtYtatDnaGN..eAdsCtFtVtV<-*
G ++ ++atD aGN+++A s +++Vt+
gi|1180530 993 G-LHSLSAIATDTAGNrsTA-SNKLNVTI 1019
DUF541: domain 1 of 1, from 1020 to 1060: score 3.2, E = 2
*->p.grprPmprmaaaaaaaypaaaaaaaappggstpveafeGeitvsa
++++p+ m ++ a + +a+a +++v++ ++ s+
gi|1180530 1020 DtSAPTGMVLSTNFVARS---MASA-------GATVAT----LSASD 1052
sVtvtfel<-*
s + t++l
gi|1180530 1053 SSSLTYQL 1060
Cadherin: domain 2 of 2, from 1031 to 1116: score 2.3, E = 6.1
CS --EEE-SS...S---EEEEE---S..-TTTT----------S S
*->ysasvpEnapvGtevltvtAtDaDdPlgpNgrirYsilggnp....g
++ + a+ G +v+t+ A+D+ + + +g+++++ ++
gi|1180530 1031 TNFVARSMASAGATVATLSASDSS------SLTYQLAVGNGVndadN 1071
CS ----B-TTSSEEE..E---S---S.....S-B--EEE----.........
gwFrIdpdtGdnegiisttkpLDREeifngeYeLtveAtDadpllasggg
F++ +t +s++ L g+Y+++++A D +
gi|1180530 1072 AAFTLVGNTLK----VSVA-ALSA-----GTYHIYLKAADTA-------- 1103
CS S---EEEE--EEE-
pplsstatvtitVl<-*
+ ++ t+tV+
gi|1180530 1104 -GNATYLATTVTVQ 1116
PKD: domain 4 of 7, from 1039 to 1115: score 9.2, E = 0.027
CS EESS.....SSSEBTTEEEEEEECT.B.TT.SSECEEEEE-SS.SSS
*->vsasaveegpsvvalgetVtFtassSydpdpGspvsysWdFGDggsp
+sa+ + +t++as+ s ++y+ +G+ +
gi|1180530 1039 ASAG-----------ATVATLSASD------SSSLTYQLAVGN---G 1065
CS EEEECSSEEEEEESS. ... SEEEEEEEEEEETTCEEEEEEEEEE
gttstepnvtHtYskg.....sVt.pGtYtVtLtvsngvgsasattttvt
+++ + +t + + + + + ++GtY++ L++ + +g+a+ ttvt
gi|1180530 1066 VNDADNAAFTLVGN-TlkvsvAALsAGTYHIYLKAADTAGNATYLATTVT 1114
CS E
V<-*
V
gi|1180530 1115 V 1115
PPC: domain 1 of 1, from 1039 to 1099: score 10.7, E = 0.022
CS ESTTCEEE EEEECTSSS...S...CCEEEEEEECCCS ESSSSTT
*->vpaggtls.isldggsslrslsgnGdadtlLywlldgd..pslsayd
++ag t++++s +++s +++ L + +g ++++ +a++
gi|1180530 1039 ASAGATVAtLSASDSS---------SLTYQLA-VGNGVndADNAAFT 1075
CS CE-.....ECCTTEEEEEECC.-SEEEEEEEEE
aystTrdvdnggsdelisftapeaGtYyirVyg<-*
++ + +s+ a++aGtY+i + +
gi|1180530 1076 LVG---------NTLKVSVAALSAGTYHIYLKA 1099
DUF1494: domain 1 of 1, from 1056 to 1064: score 1.1, E = 3.2
*->LtYqFAlGk<-*
LtYq A+G
gi|1180530 1056 LTYQLAVGN 1064
Peptidase_S6: domain 1 of 1, from 1066 to 1079: score -1.3, E = 9.3
*->vtlkahslftlsgs<-*
v + +++ ftl+g+
gi|1180530 1066 VNDADNAAFTLVGN 1079
Y_Y_Y: domain 2 of 2, from 1082 to 1116: score 12.9, E = 0.004
*->elsytnLppGkYtikvkakdkdgnwsyddiasltftvl<-*
++s L++G+Y+i++ka d gn +y t+tv+
gi|1180530 1082 KVSVAALSAGTYHIYLKAADTAGNATY---LATTVTVQ 1116
DUF2301: domain 1 of 1, from 1088 to 1098: score 1.0, E = 6
*->lsLstIHIYlk<-*
ls+ t HIYlk
gi|1180530 1088 LSAGTYHIYLK 1098
Protocadherin: domain 1 of 1, from 1102 to 1111: score 0.1, E = 9
*->TvaNATliee<-*
T++NAT++ +
gi|1180530 1102 TAGNATYLAT 1111
Viral_coat: domain 1 of 1, from 1141 to 1156: score 0.9, E = 7
CS EEEEEEEECE.ECGGG-S
*->isYtVeliePvqptanll<-*
i+YtV+++e+v++ +
gi|1180530 1141 IEYTVTFSEAVTGVD--S 1156
Arg_repressor_C: domain 1 of 2, from 1146 to 1159: score 1.3, E = 16
CS HHHHHEEEEEEETT
*->llseavlsvdrnen<-*
++seav++vd +++
gi|1180530 1146 TFSEAVTGVDSSDF 1159
fn3: domain 2 of 2, from 1178 to 1193: score 2.0, E = 7.6
CS T-EEEEEEEEEETTE-EBE
*->gteYtvrVqAvnggGGpeS<-*
gt+Ytv+V ++g+ S
gi|1180530 1178 GTTYTVTVSGISGD---GS 1193
Arabinose_trans: domain 1 of 1, from 1182 to 1197: score -2.0, E = 8.5
*->taTrsGwwspGPiRal<-*
t+T+sG + G +R+
gi|1180530 1182 TVTVSGISGDGSLRLD 1197
DUF2141: domain 1 of 2, from 1183 to 1198: score 0.1, E = 22
*->VtveGlrsakGqllval<-*
Vtv+G+ s++G l++ l
gi|1180530 1183 VTVSGI-SGDGSLRLDL 1198
LuxS: domain 1 of 1, from 1219 to 1230: score 4.2, E = 1
CS -SGGGGGSGTTT
*->plveSFtlDHTk<-*
+ eSFtlDHT+
gi|1180530 1219 TSGESFTLDHTA 1230
Big_2: domain 1 of 3, from 1293 to 1318: score 0.6, E = 17
CS EEEE-SSS-EEEEEEETT.TEEEEEEE
*->lVtalakGtatItatsgdgnksasvtv<-*
+ t l++G+ tItat+ d + + v
gi|1180530 1293 TSTTLSEGSHTITATATD-AAGNVSAV 1318
HYR: domain 3 of 4, from 1296 to 1314: score 11.3, E = 0.0098
*->fFpvGEettVtYtatDnaGN<-*
++++G ++t+t+tatD+aGN
gi|1180530 1296 TLSEG-SHTITATATDAAGN 1314
PKD: domain 5 of 7, from 1297 to 1323: score 6.4, E = 0.19
CS SS....SEEEEEEEEEEETTCEEEEEEEEEEE
*->skgsVtpGtYtVtLtvsngvgsasattttvtV<-*
++ +G++t+t t+++++g++sa + +
gi|1180530 1297 LS----EGSHTITATATDAAGNVSAV-SSGVA 1323
He_PIG: domain 2 of 5, from 1300 to 1313: score 0.0, E = 32
*->Gsytftvtatdgsg<-*
Gs t+t tatd++g
gi|1180530 1300 GSHTITATATDAAG 1313
Big_2: domain 2 of 3, from 1329 to 1351: score 1.5, E = 9.2
CS EEEEEEETTT.TEEES--SEEETTS
*->avtsvtvsptgntaslakGatlqlk<-*
+v+++++ +++l++G++ +++
gi|1180530 1329 MAPTVAITSS--ATALKAGESATFT 1351
A2M_N_2: domain 1 of 3, from 1333 to 1363: score 4.2, E = 1.4
*->LklsldkkeykvGetakvtvtgspfpagkfay<-*
+ ++ +++k+Ge a++t+t + + + +f++
gi|1180530 1333 VAITSSATALKAGESATFTFT-FSEVPSEFTL 1363
PKD: domain 6 of 7, from 1335 to 1351: score 1.6, E = 5.9
CS EESS.....SSSEBTTEEEEEE
*->vsasaveegpsvvalgetVtFt<-*
+++s ++ +++ge++tFt
gi|1180530 1335 ITSS-----ATALKAGESATFT 1351
E1_DerP2_DerF2: domain 1 of 1, from 1342 to 1366: score 3.1, E = 1.9
CS B-TTSEEEEEEEE E-STTS-TTEE
*->lkkGetvtytlsl.pipkeyPpgky<-*
lk+Ge t+t +++++p+e+ g++
gi|1180530 1342 LKAGESATFTFTFsEVPSEFTLGDL 1366
DUF2434: domain 1 of 1, from 1370 to 1377: score 1.2, E = 3.9
*->YsNGTLSNGt<-*
NGTLSN+t
gi|1180530 1370 --NGTLSNFT 1377
Big_2: domain 3 of 3, from 1430 to 1470: score 1.0, E = 13
CS EEEEEEETTT.TEEES--SEEETTSEEEEEEESTT....SBEEEE
*->avtsvtvsptgntaslakGatlqlkatvtpsdasnkdiTkkvtWs<-
a sv +s++ + sl++G+t + t ++ ++ +d+ ++vt++
gi|1180530 1430 AAPSVLISSS--ASSLKAGETAVITFTFSDAPQG-FDL-NDVTVA 1470
CS
*
gi|1180530 - -
A2M_N_2: domain 2 of 3, from 1434 to 1472: score 3.3, E = 2.4
*->LklsldkkeykvGetakvtvt.g.spfpagkfaylvverG<-*
+ +s +++k+Geta +t+t ++p + +++ ++v++G
gi|1180530 1434 VLISSSASSLKAGETAVITFTfSdAPQ-GFDLNDVTVAGG 1472
Cu-oxidase: domain 1 of 1, from 1505 to 1531: score 1.2, E = 6.8
CS EEEEECCS...GSSHHHHHTTSCEEEEEEESTT
*->ivanpnmgssyrfgriaafdngtttaiLrYsga<-*
i+a +sy+++ + g +a+++Y+ +
gi|1180530 1505 ISA-----GSYTDA-AGNMGPGASSATIHYDTG 1531
Flu_B_NS1: domain 1 of 1, from 1507 to 1532: score 1.3, E = 3
CS -------------TTHHHHHHHHHHHH
*->maDnmtttqiEvGPGatnatinFeAGi<-*
a t +GPGa ati ++ G+
gi|1180530 1507 -AGSYTDAAGNMGPGASSATIHYDTGV 1532
Mo-co_dimer: domain 2 of 3, from 1576 to 1589: score 0.8, E = 7.6
CS EEEESSTTSS-EE-
*->VEVSLDgGksWrlA<-*
V VSLD G +W +A
gi|1180530 1576 VQVSLDSGATWATA 1589
BNR: domain 3 of 15, from 1577 to 1588: score 8.4, E = 0.32
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
++S D G+TW +
gi|1180530 1577 QVSLDSGATWAT 1588
Integrin_beta: domain 1 of 1, from 1755 to 1771: score -1.7, E = 8.3
CS HHHHHHT---B-SSSSS
*->FneeVgkQrISGNLDaP<-*
F + Vg Q ISGNL aP
gi|1180530 1755 FITNVGTQTISGNLSAP 1771
Dysbindin: domain 1 of 1, from 1768 to 1785: score -0.1, E = 7.9
*->addPerQstvedtfltve<-*
++ P++Q++ + l+++
gi|1180530 1768 LSAPLAQGDRVLISLDGG 1785
DUF1741: domain 1 of 1, from 1771 to 1780: score 0.4, E = 8.3
*->PlvtgdRvLa<-*
Pl+ gdRvL+
gi|1180530 1771 PLAQGDRVLI 1780
SpoVT_AbrB: domain 1 of 1, from 1772 to 1797: score 2.5, E = 7.6
*->lkeGdevelevdkgdggeiilrpkksepk<-*
l +Gd+v + +d g+ +++ s+
gi|1180530 1772 LAQGDRVLISLD-GG--ASWITASASGTN 1797
Mo-co_dimer: domain 3 of 3, from 1776 to 1792: score 1.6, E = 4.3
CS EEEEEESSTTSS-EE-E
*->tRVEVSLDgGksWrlAe<-*
+RV +SLDgG sW +A+
gi|1180530 1776 DRVLISLDGGASWITAS 1792
BNR: domain 4 of 15, from 1779 to 1790: score 6.8, E = 1
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
+S DgG++W +
gi|1180530 1779 LISLDGGASWIT 1790
Gmad2: domain 1 of 1, from 1797 to 1823: score 2.6, E = 2.9
*->tFsatvdipapaapgtgtleVfetSpsDGsgse<-*
++sa+ +++ pg++tl+V +++ + + +
gi|1180530 1797 NWSASATLH----PGSNTLQVKVSDSAGNE--G 1823
He_PIG: domain 3 of 5, from 1805 to 1820: score 5.3, E = 1
*->qpGsytftvtatdgsg<-*
+pGs t v ++d++g
gi|1180530 1805 HPGSNTLQVKVSDSAG 1820
Methyltransf_6: domain 1 of 1, from 1912 to 1918: score 1.0, E = 6.4
CS ETTEEEE
*->DndGivV<-*
Dn+Gi+V
gi|1180530 1912 DNNGITV 1918
HHH: domain 1 of 1, from 1967 to 1977: score 2.7, E = 9.8
CS HHHHHHHHHHH
*->GpktAeaIlsy<-*
G ++A+++ls+
gi|1180530 1967 GGYKAGDVLSF 1977
UPF0561: domain 1 of 1, from 1970 to 1981: score 2.4, E = 3.7
*->dsGdItsliVyk<-*
+ Gd++s++V+
gi|1180530 1970 KAGDVLSFTVNA 1981
Fumble: domain 1 of 1, from 1991 to 2001: score 7.5, E = 0.049
*->shvaiDIGGtL<-*
+++a+DIGGt+
gi|1180530 1991 PRLAVDIGGTT 2001
Hydant_A_N: domain 1 of 1, from 1992 to 2000: score 4.4, E = 0.97
*->riGIDvGGT<-*
r+++D+GGT
gi|1180530 1992 RLAVDIGGT 2000
LysM: domain 1 of 1, from 2020 to 2026: score 2.5, E = 9.8
CS EE--TT-
*->YtVkkGD<-*
YtV+ GD
gi|1180530 2020 YTVQAGD 2026
Baculo_PEP_C: domain 1 of 1, from 2051 to 2080: score 2.2, E = 5.9
*->nNLLqAinnLvtdlGnvgqgvaallntvasilti<-*
nNL+ ++n+L G+ + +++++l a+i+ +
gi|1180530 2051 NNLVLTLNGL----GATSGVIVDTLRPTATIVVA 2080
DUF1236: domain 1 of 6, from 2067 to 2089: score 0.8, E = 18
*->YVkeqpvpqdpVvvvgfeivVGap<-*
V++ + p+ ++vv +++++VG++
gi|1180530 2067 IVDTLR-PTATIVVADTSLAVGET 2089
DUF1929: domain 1 of 7, from 2072 to 2100: score 2.6, E = 1.6
CS ---EEE.ES-SEEETT-E. EEEEESS--
*->RPtItstvaPssikYGgsy.ftvtvsvpi<-*
RPt t +va++s+++G+++ +t+t+s ++
gi|1180530 2072 RPTATIVVADTSLAVGETSlVTITFSEAV 2100
Big_3: domain 1 of 5, from 2077 to 2089: score 1.9, E = 12
*->itpkKttYyvGds<-*
i +++t+++vG++
gi|1180530 2077 IVVADTSLAVGET 2089
NOZZLE: domain 1 of 1, from 2078 to 2100: score -0.4, E = 6.5
*->vvAktssLvGDCsPntiDLsLKL<-*
vvA ts vG+ s ti s +
gi|1180530 2078 VVADTSLAVGETSLVTITFSEAV 2100
SHNi-TPR: domain 1 of 3, from 2080 to 2106: score 1.7, E = 19
*->AdvydlLGEiSlEnEnFpqAveDlrka<-*
Ad+ + GE Sl F++Av D++ a
gi|1180530 2080 ADTSLAVGETSLVTITFSEAVNDFTNA 2106
DUF1522: domain 1 of 4, from 2104 to 2115: score 1.8, E = 5.3
*->tgADLsItGtgdl<-*
t+ADLs++G g+l
gi|1180530 2104 TNADLSVSG-GTL 2115
BNR: domain 5 of 15, from 2118 to 2129: score 9.7, E = 0.13
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
S DgG TW++
gi|1180530 2118 VSSSDGGVTWTA 2129
SBBP: domain 1 of 7, from 2160 to 2169: score 1.4, E = 18
*->tGstngnnfe<-*
+Gst++nn+
gi|1180530 2160 VGSTDSNNYA 2169
DUF1535: domain 1 of 5, from 2167 to 2173: score 1.0, E = 16
*->QYAIdnL<-*
+YAId L
gi|1180530 2167 NYAIDTL 2173
DUF1929: domain 2 of 7, from 2174 to 2213: score 0.4, E = 8.2
CS ---EEE.ES-SEEETT-E.EEEEESS--....... SEEE
*->RPtItstvaPssikYGgsyftvtvsvpisvvakgn..vkvt<-*
RPt t va++ +++G++ tvt + + v++ +n++++v+
gi|1180530 2174 RPTATIAVADTALAVGET-STVTITFSEAVDGFDNsdLSVS 2213
DUF1573: domain 1 of 5, from 2189 to 2198: score 1.4, E = 20
*->GesGeIkvtf<-*
Ge+ ++++tf
gi|1180530 2189 GETSTVTITF 2198
MCE: domain 1 of 4, from 2190 to 2204: score 0.2, E = 23
*->rgytvtayFddalgG<-*
+ tvt++F++a++G
gi|1180530 2190 ETSTVTITFSEAVDG 2204
BNR: domain 6 of 15, from 2220 to 2231: score 9.7, E = 0.13
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
S DgG TW++
gi|1180530 2220 VSSSDGGVTWTA 2231
SBBP: domain 2 of 7, from 2262 to 2271: score 1.4, E = 18
*->tGstngnnfe<-*
+Gst++nn+
gi|1180530 2262 VGSTDSNNYA 2271
DUF1535: domain 2 of 5, from 2269 to 2275: score 1.0, E = 16
*->QYAIdnL<-*
+YAId L
gi|1180530 2269 NYAIDTL 2275
DUF1236: domain 2 of 6, from 2271 to 2293: score 1.9, E = 8.6
*->YVkeqpvpqdpVvvvgfeivVGap<-*
+++ + p+ ++vv +++++VG++
gi|1180530 2271 AIDTLR-PTATIVVADTSLAVGET 2293
DUF1929: domain 3 of 7, from 2276 to 2304: score 2.6, E = 1.6
CS ---EEE.ES-SEEETT-E. EEEEESS--
*->RPtItstvaPssikYGgsy.ftvtvsvpi<-*
RPt t +va++s+++G+++ +t+t+s ++
gi|1180530 2276 RPTATIVVADTSLAVGETSlVTITFSEAV 2304
Big_3: domain 2 of 5, from 2281 to 2293: score 1.9, E = 12
*->itpkKttYyvGds<-*
i +++t+++vG++
gi|1180530 2281 IVVADTSLAVGET 2293
SHNi-TPR: domain 2 of 3, from 2284 to 2310: score 1.7, E = 19
*->AdvydlLGEiSlEnEnFpqAveDlrka<-*
Ad+ + GE Sl F++Av D++ a
gi|1180530 2284 ADTSLAVGETSLVTITFSEAVNDFTNA 2310
DUF1522: domain 2 of 4, from 2308 to 2319: score 1.8, E = 5.3
*->tgADLsItGtgdl<-*
t+ADLs++G g+l
gi|1180530 2308 TNADLSVSG-GTL 2319
BNR: domain 7 of 15, from 2322 to 2333: score 8.5, E = 0.31
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
S DgG TW++
gi|1180530 2322 VSSSDGGTTWTA 2333
DUF1535: domain 3 of 5, from 2371 to 2377: score 1.0, E = 16
*->QYAIdnL<-*
+YAId L
gi|1180530 2371 NYAIDTL 2377
DUF1236: domain 3 of 6, from 2373 to 2395: score 1.9, E = 8.6
*->YVkeqpvpqdpVvvvgfeivVGap<-*
+++ + p+ ++vv +++++VG++
gi|1180530 2373 AIDTLR-PTATIVVADTSLAVGET 2395
DUF1929: domain 4 of 7, from 2378 to 2395: score 2.4, E = 1.9
CS ---EEE.ES-SEEETT-E
*->RPtItstvaPssikYGgs<-*
RPt t +va++s+++G++
gi|1180530 2378 RPTATIVVADTSLAVGET 2395
Big_3: domain 3 of 5, from 2383 to 2395: score 1.9, E = 12
*->itpkKttYyvGds<-*
i +++t+++vG++
gi|1180530 2383 IVVADTSLAVGET 2395
SHNi-TPR: domain 3 of 3, from 2386 to 2412: score 0.1, E = 54
*->AdvydlLGEiSlEnEnFpqAveDlrka<-*
Ad+ + GE Sl F++Av D++ a
gi|1180530 2386 ADTSLAVGETSLVTIIFSEAVNDFTNA 2412
DUF1522: domain 3 of 4, from 2410 to 2421: score 1.8, E = 5.3
*->tgADLsItGtgdl<-*
t+ADLs++G g+l
gi|1180530 2410 TNADLSVSG-GTL 2421
BNR: domain 8 of 15, from 2424 to 2435: score 10.3, E = 0.087
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
S DgG+TW++
gi|1180530 2424 VSSSDGGITWTA 2435
BAT2_N: domain 1 of 1, from 2451 to 2471: score 0.6, E = 6.6
*->tLqPAAGdqdksgkekdatdes<-*
tL +AG dk+g+ t +s
gi|1180530 2451 TLN-NAGVTDKAGNAGVGTTDS 2471
SBBP: domain 3 of 7, from 2466 to 2475: score 0.6, E = 31
*->tGstngnnfe<-*
+G+t++nn+
gi|1180530 2466 VGTTDSNNYA 2475
DUF1535: domain 4 of 5, from 2473 to 2479: score 0.3, E = 27
*->QYAIdnL<-*
+YA+d L
gi|1180530 2473 NYAVDTL 2479
AlaDh_PNT_N: domain 1 of 1, from 2477 to 2486: score 0.9, E = 5.1
CS TTTHHHHHHH
*->dlLssMseiA<-*
d L +M+ iA
gi|1180530 2477 DTLRPMATIA 2486
A2M_N_2: domain 3 of 3, from 2483 to 2551: score 0.1, E = 18
*->LklsldkkeykvGetakvtvtgspfpagk............faylvv
+++ ++++vGet +vt+t + ++ + ++ + + +++++ ++
gi|1180530 2483 ATIAVADAALQVGETTTVTIT-FSEAVNDftnadlsvsggtLSTVSS 2528
erGkilasgwvevpeggstvttlel<-*
+ G+i ++ +++ +++ +++ ++l
gi|1180530 2529 SDGGITWTATFTPTANLEST--VNL 2551
DUF11: domain 1 of 1, from 2486 to 2505: score 3.2, E = 5.5
*->tvsnatarpGdtvtYTiTVt<-*
+v +a+ ++G+t+t+TiT++
gi|1180530 2486 AVADAALQVGETTTVTITFS 2505
DUF2141: domain 2 of 2, from 2489 to 2502: score 1.4, E = 9.1
*->dAaFtldggdttitI<-*
dAa + g+ tt+tI
gi|1180530 2489 DAALQV-GETTTVTI 2502
DUF1573: domain 2 of 5, from 2495 to 2504: score 2.5, E = 9.9
*->GesGeIkvtf<-*
Ge++++++tf
gi|1180530 2495 GETTTVTITF 2504
DUF1522: domain 4 of 4, from 2512 to 2523: score 1.8, E = 5.3
*->tgADLsItGtgdl<-*
t+ADLs++G g+l
gi|1180530 2512 TNADLSVSG-GTL 2523
BNR: domain 9 of 15, from 2526 to 2537: score 10.3, E = 0.087
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
S DgG+TW++
gi|1180530 2526 VSSSDGGITWTA 2537
DUF1929: domain 5 of 7, from 2582 to 2621: score 0.5, E = 7.6
CS ---EEE.ES-SEEETT-E.EEEEESS--....... SEEE
*->RPtItstvaPssikYGgsyftvtvsvpisvvakgn..vkvt<-*
RPt t tva+ +++G++ tvt + + v++ +n++++v+
gi|1180530 2582 RPTATITVADPALAVGET-STVTITFSEAVDGFDNsdLSVS 2621
DUF2359: domain 1 of 1, from 2586 to 2596: score 2.8, E = 0.26
*->TvtvadWaLal<-*
T+tvad+aLa+
gi|1180530 2586 TITVADPALAV 2596
DUF1573: domain 3 of 5, from 2597 to 2606: score 1.4, E = 20
*->GesGeIkvtf<-*
Ge+ ++++tf
gi|1180530 2597 GETSTVTITF 2606
MCE: domain 2 of 4, from 2598 to 2612: score 0.2, E = 23
*->rgytvtayFddalgG<-*
+ tvt++F++a++G
gi|1180530 2598 ETSTVTITFSEAVDG 2612
BNR: domain 10 of 15, from 2628 to 2639: score 12.2, E = 0.023
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
+S DgG+TW++
gi|1180530 2628 VTSIDGGITWTA 2639
SBBP: domain 4 of 7, from 2670 to 2679: score 0.6, E = 31
*->tGstngnnfe<-*
+G+t++nn+
gi|1180530 2670 VGTTDSNNYA 2679
DUF1535: domain 5 of 5, from 2677 to 2683: score 0.3, E = 27
*->QYAIdnL<-*
+YA+d L
gi|1180530 2677 NYAVDTL 2683
DUF1929: domain 6 of 7, from 2684 to 2723: score 4.4, E = 0.4
CS ---EEE.ES-SEEETT-E .EEEEESS--.......SEEE
*->RPtItstvaPssikYGgs.yftvtvsvpisvvakgnvkvt<-*
RPt t +va++ +++G+s+++t+t+s ++++ ++g+ +v+
gi|1180530 2684 RPTATIVVADAALAVGESsTVTITFSEAVTGLDIGDFTVA 2723
DUF1573: domain 4 of 5, from 2699 to 2708: score 1.5, E = 19
*->GesGeIkvtf<-*
Ges ++++tf
gi|1180530 2699 GESSTVTITF 2708
MCE: domain 3 of 4, from 2700 to 2719: score 4.7, E = 1.2
*->rgytvtayFddalgGLkvGa<-*
+ tvt++F++a++GL G+
gi|1180530 2700 ESSTVTITFSEAVTGLDIGD 2719
Arg_repressor_C: domain 2 of 2, from 2707 to 2722: score 1.2, E = 17
CS HHHHHEEEEEEETTEE
*->llseavlsvdrnenfi<-*
++seav+++d+ ++++
gi|1180530 2707 TFSEAVTGLDIGDFTV 2722
DUF1118: domain 1 of 2, from 2722 to 2734: score 2.0, E = 2.3
*->vgSvvvsgLqeSD<-*
v+ +v+s+L +SD
gi|1180530 2722 VANGVLSNLSSSD 2734
BNR: domain 11 of 15, from 2730 to 2741: score 10.2, E = 0.095
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
S DgG+TW++
gi|1180530 2730 LSSSDGGITWTA 2741
SBBP: domain 5 of 7, from 2738 to 2770: score 6.9, E = 0.46
*->qWstqlGPgpgasifgngIavDsnGNiYvtGst<-*
W++ l P+++ ++++n Ia D+ G++ +G+t
gi|1180530 2738 TWTAILTPTASVTDTTNVIALDDTGYVDAAGNT 2770
DUF1236: domain 4 of 6, from 2781 to 2802: score 1.9, E = 8.7
*->YVkeqpvpqdpVvvvgfeivVGa<-*
+++q+ p+ ++vv ++ ++VG+
gi|1180530 2781 AIDTQR-PTATIVVNDTALAVGE 2802
DUF1929: domain 7 of 7, from 2786 to 2825: score 0.6, E = 7.3
CS ---EEE.ES-SEEETT-E .EEEEESS--.......SEEE
*->RPtItstvaPssikYGgs.yftvtvsvpisvvakgnvkvt<-*
RPt t +v ++ +++G+s+++++t+s ++++ ++g+ +v+
gi|1180530 2786 RPTATIVVNDTALAVGESsTVAITFSEAVMGLDIGDFTVA 2825
Big_3: domain 4 of 5, from 2791 to 2803: score 0.4, E = 33
*->itpkKttYyvGds<-*
i +++t ++vG+s
gi|1180530 2791 IVVNDTALAVGES 2803
DUF1573: domain 5 of 5, from 2801 to 2810: score 0.2, E = 44
*->GesGeIkvtf<-*
Ges ++ +tf
gi|1180530 2801 GESSTVAITF 2810
DUF1118: domain 2 of 2, from 2824 to 2836: score 2.0, E = 2.3
*->vgSvvvsgLqeSD<-*
v+ +v+s+L +SD
gi|1180530 2824 VANGVLSNLSSSD 2836
BNR: domain 12 of 15, from 2832 to 2843: score 10.2, E = 0.095
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
S DgG+TW++
gi|1180530 2832 LSSSDGGITWTA 2843
SBBP: domain 6 of 7, from 2840 to 2872: score 3.9, E = 3.5
*->qWstqlGPgpgasifgngIavDsnGNiYvtGst<-*
W++ l P++g ++++n I+ D G++ +G+t
gi|1180530 2840 TWTAILTPTAGITDTTNVITLDNTGYADAAGNT 2872
DUF735: domain 1 of 2, from 2852 to 2862: score 1.2, E = 4.2
*->TdtkkiiTadn<-*
Tdt ++iT dn
gi|1180530 2852 TDTTNVITLDN 2862
DUF1236: domain 5 of 6, from 2883 to 2905: score 2.7, E = 5.2
*->YVkeqpvpqdpVvvvgfeivVGap<-*
+++q++ ++ Vv+++ ++VG++
gi|1180530 2883 AIDTQRPTATIVVTDN-ALRVGET 2905
BNR: domain 13 of 15, from 2934 to 2945: score 10.7, E = 0.066
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
+S DgG TW++
gi|1180530 2934 LTSSDGGLTWTA 2945
HYR: domain 4 of 4, from 2967 to 2978: score 0.0, E = 22
*->atDnaGNeAdsCt<-*
++D+aGN++ ++t
gi|1180530 2967 YEDAAGNTG-TGT 2978
SBBP: domain 7 of 7, from 2976 to 2985: score 0.0, E = 47
*->tGstngnnfe<-*
tG+t+++n+
gi|1180530 2976 TGTTDSSNYA 2985
DUF1236: domain 6 of 6, from 2985 to 3006: score 1.9, E = 8.7
*->YVkeqpvpqdpVvvvgfeivVGa<-*
+++q+ p+ ++vv ++ ++VG+
gi|1180530 2985 AIDTQR-PTATIVVNDTALAVGE 3006
Big_3: domain 5 of 5, from 2995 to 3007: score 0.4, E = 33
*->itpkKttYyvGds<-*
i +++t ++vG+s
gi|1180530 2995 IVVNDTALAVGES 3007
MCE: domain 4 of 4, from 3006 to 3025: score 3.7, E = 2.2
*->rgytvtayFddalgGLkvGa<-*
+ tv ++F++a++GL vG+
gi|1180530 3006 ESSTVIITFSEAVTGLDVGD 3025
BNR: domain 14 of 15, from 3036 to 3047: score 10.5, E = 0.074
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
+S DgG+TW+
gi|1180530 3036 LTSSDGGITWTV 3047
He_PIG: domain 4 of 5, from 3038 to 3057: score 0.1, E = 30
*->sstGritGtPtptvqpGsyt<-*
ss+G it+t+t t ++G ++
gi|1180530 3038 SSDGGITWTVTLTPTAGITD 3057
DUF735: domain 2 of 2, from 3056 to 3066: score 1.8, E = 2.9
*->TdtkkiiTadn<-*
Tdt ++iT +n
gi|1180530 3056 TDTSNVITLNN 3066
Gp37: domain 1 of 1, from 3123 to 3133: score 1.3, E = 8.2
*->eaaGlWQYaLd<-*
ea+G+WQY Ld
gi|1180530 3123 EAEGRWQYSLD 3133
BNR: domain 15 of 15, from 3129 to 3140: score 8.8, E = 0.25
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
+yS D+G +W +
gi|1180530 3129 QYSLDNGVSWIE 3140
CHB_HEX_C: domain 1 of 1, from 3129 to 3138: score 3.9, E = 3.1
*->EYSlDgGknW<-*
+YSlD+G +W
gi|1180530 3129 QYSLDNGVSW 3138
DUF2201: domain 1 of 1, from 3149 to 3164: score 4.2, E = 0.3
*->PstGGLALWvaHrDla<-*
P++G+ +LWv+ rD+a
gi|1180530 3149 PGLGAFSLWVQQRDVA 3164
Phage_GPD: domain 1 of 1, from 3150 to 3166: score 1.7, E = 3
*->ltPaFrlvadgkDITgr<-*
++ aF+l+++++D++g+
gi|1180530 3150 GLGAFSLWVQQRDVAGN 3166
DUF1069: domain 1 of 1, from 3199 to 3208: score 1.5, E = 6.1
*->GLAAsPLqPs<-*
GLA +P qPs
gi|1180530 3199 GLALAPFQPS 3208
DUF1221: domain 1 of 1, from 3218 to 3227: score 0.3, E = 2.1
*->LFPsSvLlgsKD<-*
L+P+S lgs
gi|1180530 3218 LHPASMMLGS-- 3227
He_PIG: domain 5 of 5, from 3308 to 3329: score 3.6, E = 3.1
*->tytlTkpsdgslasysttpggggLPsGLtLdsstGrit<-*
++++ LP++ Ld++tG +t
gi|1180530 3308 SFSA----------------RQELPAWVRLDRHTGQLT 3329
Glucodextran_B: domain 1 of 1, from 3327 to 3338: score 2.8, E = 3.5
CS --EEEEES-SEEE
*->PeLsvtaPeaLst<-*
+L+++aP+ Lst
gi|1180530 3327 -QLTINAPKDLST 3338
PKD: domain 7 of 7, from 3338 to 3360: score 0.5, E = 13
CS EEEEEEEEEEETTCEEEEEEEEEEE
*->GtYtVtLtvsngvgsasattttvtV<-*
+t ++ +vs+g+g+ s+ +tv+V
gi|1180530 3338 TTLVLQIKVSDGKGHESV--RTVKV 3360
DUF2423: domain 1 of 1, from 3378 to 3390: score 3.2, E = 2.2
*->LSaKLkeelkkqk<-*
LS+K+++ +++q
gi|1180530 3378 LSEKMANAANQQA 3390
//